Query 016755
Match_columns 383
No_of_seqs 340 out of 2731
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 02:31:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016755.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016755hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02940 riboflavin kinase 100.0 6.2E-79 1.3E-83 585.7 40.2 372 6-378 8-380 (382)
2 TIGR00083 ribF riboflavin kina 100.0 1.7E-48 3.8E-53 356.8 19.4 221 97-362 57-288 (288)
3 PF01687 Flavokinase: Riboflav 100.0 1.7E-48 3.6E-53 311.9 11.3 125 232-362 1-125 (125)
4 PRK05627 bifunctional riboflav 100.0 7.1E-46 1.5E-50 343.1 21.3 222 96-362 72-304 (305)
5 COG0196 RibF FAD synthase [Coe 100.0 2.7E-45 5.8E-50 334.5 19.6 220 96-362 74-304 (304)
6 KOG3110 Riboflavin kinase [Coe 100.0 1.9E-41 4.1E-46 261.4 12.9 149 229-377 5-153 (153)
7 PRK07143 hypothetical protein; 100.0 3.3E-35 7.1E-40 267.4 18.1 198 97-364 68-275 (279)
8 PRK10826 2-deoxyglucose-6-phos 100.0 4.1E-29 8.9E-34 224.4 22.4 209 6-215 4-216 (222)
9 COG0637 Predicted phosphatase/ 100.0 1E-28 2.2E-33 220.9 20.0 187 8-195 1-189 (221)
10 COG0546 Gph Predicted phosphat 100.0 1.8E-28 3.9E-33 219.7 21.0 207 7-215 2-214 (220)
11 PLN02770 haloacid dehalogenase 100.0 1.6E-28 3.4E-33 224.1 20.9 206 7-215 20-232 (248)
12 PRK13288 pyrophosphatase PpaX; 100.0 1.3E-28 2.9E-33 219.8 19.7 203 7-215 1-207 (214)
13 PLN03243 haloacid dehalogenase 100.0 1.5E-28 3.2E-33 224.7 20.0 205 7-214 22-230 (260)
14 TIGR03351 PhnX-like phosphonat 100.0 2.9E-28 6.3E-33 218.6 20.3 205 9-214 1-215 (220)
15 PRK13226 phosphoglycolate phos 100.0 3.4E-28 7.3E-33 219.3 19.7 206 7-214 10-220 (229)
16 PLN02575 haloacid dehalogenase 100.0 5.4E-28 1.2E-32 228.6 21.4 206 8-215 130-338 (381)
17 TIGR01449 PGP_bact 2-phosphogl 100.0 8.7E-28 1.9E-32 214.3 21.1 202 12-214 1-209 (213)
18 PRK10725 fructose-1-P/6-phosph 100.0 1.4E-27 3.1E-32 208.8 21.6 186 5-193 1-187 (188)
19 PRK11587 putative phosphatase; 100.0 1E-27 2.2E-32 214.7 19.5 202 7-216 1-205 (218)
20 TIGR01422 phosphonatase phosph 100.0 1.5E-27 3.1E-32 218.6 20.1 188 8-196 1-205 (253)
21 PRK10563 6-phosphogluconate ph 100.0 3.5E-27 7.5E-32 211.8 20.7 205 7-215 2-209 (221)
22 PRK13478 phosphonoacetaldehyde 100.0 3.1E-27 6.7E-32 218.1 20.9 209 6-215 1-251 (267)
23 TIGR02253 CTE7 HAD superfamily 100.0 4.3E-27 9.3E-32 211.1 18.2 205 8-213 1-219 (221)
24 PRK13223 phosphoglycolate phos 99.9 1.9E-26 4.2E-31 212.8 20.2 208 7-215 11-226 (272)
25 TIGR01990 bPGM beta-phosphoglu 99.9 3.1E-26 6.6E-31 199.7 20.3 179 11-192 1-185 (185)
26 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 4.9E-26 1.1E-30 198.4 20.9 180 9-191 1-185 (185)
27 PRK13222 phosphoglycolate phos 99.9 1.1E-25 2.3E-30 202.6 22.8 208 7-215 4-218 (226)
28 TIGR01454 AHBA_synth_RP 3-amin 99.9 4.2E-26 9.1E-31 202.3 19.2 195 12-214 1-199 (205)
29 PRK13225 phosphoglycolate phos 99.9 5.9E-26 1.3E-30 208.9 19.6 201 7-215 60-264 (273)
30 KOG2914 Predicted haloacid-hal 99.9 1.5E-25 3.3E-30 196.8 21.1 213 3-215 4-219 (222)
31 PLN02811 hydrolase 99.9 3.8E-25 8.3E-30 198.3 21.3 202 16-217 1-209 (220)
32 TIGR02254 YjjG/YfnB HAD superf 99.9 3E-25 6.4E-30 199.4 20.1 200 9-214 1-220 (224)
33 PRK09449 dUMP phosphatase; Pro 99.9 4.3E-25 9.3E-30 198.6 19.1 197 8-214 2-218 (224)
34 PLN02779 haloacid dehalogenase 99.9 1.1E-24 2.5E-29 202.2 22.0 208 7-217 38-271 (286)
35 TIGR01428 HAD_type_II 2-haloal 99.9 4.2E-25 9.2E-30 194.8 18.2 180 9-195 1-195 (198)
36 PRK06698 bifunctional 5'-methy 99.9 5.6E-25 1.2E-29 217.8 19.6 204 6-214 238-449 (459)
37 TIGR02252 DREG-2 REG-2-like, H 99.9 2.3E-24 5E-29 190.9 18.4 178 10-190 1-203 (203)
38 PLN02919 haloacid dehalogenase 99.9 4.1E-24 8.8E-29 228.5 23.3 208 7-215 73-286 (1057)
39 PF13419 HAD_2: Haloacid dehal 99.9 1E-24 2.2E-29 187.5 14.9 175 12-191 1-176 (176)
40 PRK14988 GMP/IMP nucleotidase; 99.9 3.1E-24 6.8E-29 192.6 17.2 108 88-196 90-198 (224)
41 PRK10748 flavin mononucleotide 99.9 3.5E-24 7.6E-29 194.3 16.6 201 7-214 8-234 (238)
42 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 3.9E-23 8.5E-28 182.1 18.7 172 11-184 2-197 (197)
43 TIGR02247 HAD-1A3-hyp Epoxide 99.9 6.5E-23 1.4E-27 182.7 16.3 179 9-193 2-197 (211)
44 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 2.5E-22 5.5E-27 174.5 18.4 175 11-191 1-183 (183)
45 PRK09456 ?-D-glucose-1-phospha 99.9 1.9E-22 4.1E-27 178.0 17.2 176 10-194 1-187 (199)
46 TIGR01993 Pyr-5-nucltdase pyri 99.9 3.2E-22 6.9E-27 174.4 15.6 170 10-191 1-184 (184)
47 COG1011 Predicted hydrolase (H 99.9 1.1E-21 2.4E-26 176.7 18.6 124 89-214 97-222 (229)
48 PHA02597 30.2 hypothetical pro 99.9 8.1E-22 1.8E-26 173.7 15.3 187 8-214 1-194 (197)
49 TIGR01549 HAD-SF-IA-v1 haloaci 99.9 4.2E-21 9.2E-26 162.3 16.5 154 11-185 1-154 (154)
50 TIGR01493 HAD-SF-IA-v2 Haloaci 99.9 1.2E-21 2.5E-26 169.4 11.5 161 11-184 1-175 (175)
51 KOG3085 Predicted hydrolase (H 99.8 2E-20 4.3E-25 164.9 13.9 187 5-194 3-215 (237)
52 TIGR00338 serB phosphoserine p 99.8 7.9E-20 1.7E-24 163.7 15.0 188 5-211 10-210 (219)
53 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 4.2E-19 9E-24 156.7 15.1 176 8-194 3-192 (201)
54 TIGR01691 enolase-ppase 2,3-di 99.8 5.1E-18 1.1E-22 150.8 20.2 184 9-195 1-199 (220)
55 PLN02954 phosphoserine phospha 99.8 3E-18 6.4E-23 154.1 17.8 192 7-214 10-219 (224)
56 TIGR00213 GmhB_yaeD D,D-heptos 99.8 1.3E-18 2.7E-23 150.5 12.0 122 90-214 25-174 (176)
57 PRK08942 D,D-heptose 1,7-bisph 99.8 2.1E-18 4.5E-23 149.8 12.2 122 90-214 28-172 (181)
58 PRK11133 serB phosphoserine ph 99.8 5.3E-18 1.1E-22 159.1 14.4 184 7-209 108-304 (322)
59 TIGR01656 Histidinol-ppas hist 99.8 1.7E-18 3.7E-23 145.1 9.4 102 91-194 27-147 (147)
60 PRK06769 hypothetical protein; 99.8 3.4E-18 7.3E-23 147.1 10.7 124 90-214 27-167 (173)
61 TIGR01672 AphA HAD superfamily 99.7 3.7E-17 8.1E-22 146.4 15.4 145 11-196 65-215 (237)
62 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 6.4E-17 1.4E-21 133.0 14.1 98 91-193 25-132 (132)
63 TIGR01685 MDP-1 magnesium-depe 99.7 4.9E-18 1.1E-22 144.8 5.6 106 89-195 43-160 (174)
64 TIGR01261 hisB_Nterm histidino 99.7 3.2E-17 6.9E-22 138.9 10.5 103 90-195 28-150 (161)
65 PRK09552 mtnX 2-hydroxy-3-keto 99.7 1.5E-16 3.3E-21 142.4 14.9 165 9-189 3-184 (219)
66 PRK13582 thrH phosphoserine ph 99.7 6.3E-16 1.4E-20 137.0 15.1 184 9-214 1-191 (205)
67 TIGR01664 DNA-3'-Pase DNA 3'-p 99.7 1.5E-16 3.1E-21 135.7 9.3 96 92-190 43-160 (166)
68 TIGR01489 DKMTPPase-SF 2,3-dik 99.7 2E-15 4.2E-20 131.7 15.9 95 89-187 70-184 (188)
69 KOG3109 Haloacid dehalogenase- 99.7 2E-15 4.4E-20 128.6 15.0 198 6-214 12-223 (244)
70 cd01427 HAD_like Haloacid deha 99.7 6.8E-16 1.5E-20 126.6 10.7 104 87-191 20-139 (139)
71 TIGR02137 HSK-PSP phosphoserin 99.6 1.9E-14 4E-19 126.8 17.1 161 9-193 1-172 (203)
72 COG0560 SerB Phosphoserine pho 99.6 9.2E-15 2E-19 129.4 15.1 172 7-193 3-188 (212)
73 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.6 1.9E-14 4.2E-19 127.1 17.0 179 11-193 1-199 (202)
74 TIGR01452 PGP_euk phosphoglyco 99.6 5.2E-16 1.1E-20 144.1 6.5 120 92-213 144-278 (279)
75 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.6 1.3E-15 2.9E-20 139.4 7.0 122 92-214 121-250 (257)
76 TIGR01668 YqeG_hyp_ppase HAD s 99.6 1.4E-14 2.9E-19 124.4 12.6 99 91-199 43-143 (170)
77 TIGR03333 salvage_mtnX 2-hydro 99.6 2.9E-14 6.3E-19 127.2 14.8 160 12-186 2-177 (214)
78 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 8.3E-15 1.8E-19 119.6 8.7 88 91-183 29-126 (128)
79 TIGR01488 HAD-SF-IB Haloacid D 99.6 4.4E-14 9.5E-19 122.0 13.4 95 89-184 71-177 (177)
80 PRK11009 aphA acid phosphatase 99.5 5.4E-14 1.2E-18 125.9 12.5 98 89-196 112-215 (237)
81 PRK05446 imidazole glycerol-ph 99.5 4.9E-14 1.1E-18 133.1 12.6 102 90-194 29-150 (354)
82 PF00702 Hydrolase: haloacid d 99.5 3.2E-14 7E-19 126.5 9.9 90 90-185 126-215 (215)
83 PRK10444 UMP phosphatase; Prov 99.5 1.6E-14 3.5E-19 131.2 5.9 72 143-214 169-245 (248)
84 PRK11590 hypothetical protein; 99.5 1.1E-12 2.4E-17 116.6 16.3 176 8-193 5-204 (211)
85 TIGR02726 phenyl_P_delta pheny 99.5 3.6E-14 7.7E-19 120.8 6.2 84 100-193 43-126 (169)
86 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.5 4.1E-14 9E-19 129.0 6.1 77 137-213 167-248 (249)
87 TIGR01670 YrbI-phosphatas 3-de 99.5 9E-14 2E-18 117.3 7.6 84 99-193 36-119 (154)
88 COG2179 Predicted hydrolase of 99.5 5.7E-13 1.2E-17 109.3 11.5 97 93-199 48-145 (175)
89 PLN02645 phosphoglycolate phos 99.5 4.5E-14 9.8E-19 132.9 5.2 105 109-214 188-303 (311)
90 PRK09484 3-deoxy-D-manno-octul 99.4 7.7E-13 1.7E-17 114.9 6.1 81 99-189 56-136 (183)
91 PHA02530 pseT polynucleotide k 99.4 2.8E-12 6E-17 120.5 10.3 104 90-194 186-298 (300)
92 COG0647 NagD Predicted sugar p 99.4 1.2E-11 2.7E-16 112.1 13.3 210 5-216 4-263 (269)
93 smart00577 CPDc catalytic doma 99.3 1.5E-12 3.2E-17 109.2 6.5 96 89-189 43-139 (148)
94 TIGR01686 FkbH FkbH-like domai 99.3 3.9E-12 8.5E-17 120.3 8.0 90 92-187 32-125 (320)
95 TIGR01460 HAD-SF-IIA Haloacid 99.3 1.8E-12 3.8E-17 117.4 4.9 49 146-194 186-236 (236)
96 PRK08238 hypothetical protein; 99.3 6.7E-11 1.5E-15 116.8 15.3 97 89-193 70-166 (479)
97 TIGR02244 HAD-IG-Ncltidse HAD 99.3 3.6E-10 7.8E-15 106.2 19.2 105 89-194 182-325 (343)
98 PRK10530 pyridoxal phosphate ( 99.3 1.2E-11 2.6E-16 114.4 9.2 117 93-213 139-260 (272)
99 TIGR01544 HAD-SF-IE haloacid d 99.3 1.6E-10 3.5E-15 105.3 16.2 95 89-184 119-230 (277)
100 PF06888 Put_Phosphatase: Puta 99.3 1.9E-10 4.1E-15 102.5 15.7 169 11-193 2-197 (234)
101 TIGR01663 PNK-3'Pase polynucle 99.3 1.4E-11 2.9E-16 122.2 9.0 92 92-186 198-305 (526)
102 TIGR01545 YfhB_g-proteo haloac 99.2 2.7E-10 5.9E-15 101.0 15.4 100 89-193 92-203 (210)
103 PF13242 Hydrolase_like: HAD-h 99.2 1.7E-11 3.7E-16 90.2 6.3 68 146-213 2-74 (75)
104 COG4229 Predicted enolase-phos 99.2 7.4E-10 1.6E-14 91.9 15.9 104 89-195 101-207 (229)
105 TIGR01456 CECR5 HAD-superfamil 99.2 9.2E-10 2E-14 104.2 15.4 70 145-214 230-316 (321)
106 KOG1615 Phosphoserine phosphat 99.1 6.9E-10 1.5E-14 93.2 11.1 160 8-183 15-191 (227)
107 PRK01158 phosphoglycolate phos 99.1 7.7E-11 1.7E-15 106.2 4.0 63 145-210 153-215 (230)
108 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.0 2E-10 4.3E-15 104.4 4.9 98 93-192 140-241 (242)
109 PF12689 Acid_PPase: Acid Phos 99.0 1.5E-09 3.2E-14 92.0 9.3 102 89-196 43-155 (169)
110 PF12710 HAD: haloacid dehalog 99.0 3.6E-09 7.8E-14 92.3 11.9 85 94-182 92-192 (192)
111 TIGR01482 SPP-subfamily Sucros 99.0 2.9E-10 6.3E-15 102.0 4.1 95 110-210 110-207 (225)
112 KOG3040 Predicted sugar phosph 99.0 9.2E-10 2E-14 93.4 6.8 68 146-213 179-251 (262)
113 COG0241 HisB Histidinol phosph 99.0 6.3E-09 1.4E-13 88.6 10.5 103 89-194 29-151 (181)
114 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.9 2.6E-09 5.6E-14 97.1 8.5 90 91-186 24-116 (242)
115 PTZ00445 p36-lilke protein; Pr 98.9 1.3E-08 2.9E-13 87.8 10.8 101 92-193 76-206 (219)
116 TIGR01533 lipo_e_P4 5'-nucleot 98.9 4.2E-08 9.1E-13 89.4 14.3 85 89-181 116-204 (266)
117 COG4359 Uncharacterized conser 98.9 7.7E-08 1.7E-12 80.3 14.4 156 11-186 5-180 (220)
118 KOG2882 p-Nitrophenyl phosphat 98.9 8.2E-09 1.8E-13 93.1 8.7 70 145-214 221-299 (306)
119 PF08645 PNK3P: Polynucleotide 98.9 1.1E-08 2.3E-13 86.5 8.8 93 93-188 31-152 (159)
120 TIGR01487 SPP-like sucrose-pho 98.9 9.1E-09 2E-13 91.8 8.7 96 111-211 111-206 (215)
121 PRK00192 mannosyl-3-phosphogly 98.8 5E-08 1.1E-12 90.3 12.1 47 146-193 188-235 (273)
122 PF09419 PGP_phosphatase: Mito 98.8 7.3E-08 1.6E-12 81.3 11.6 87 97-194 65-166 (168)
123 COG1778 Low specificity phosph 98.8 1.2E-08 2.5E-13 83.1 6.2 84 100-193 44-127 (170)
124 COG0561 Cof Predicted hydrolas 98.8 1.7E-08 3.6E-13 93.0 7.6 49 145-193 185-233 (264)
125 KOG3120 Predicted haloacid deh 98.8 1.5E-07 3.3E-12 80.9 12.3 172 8-193 12-210 (256)
126 TIGR02463 MPGP_rel mannosyl-3- 98.7 2.8E-07 6.2E-12 82.4 14.3 45 146-190 176-220 (221)
127 PRK15126 thiamin pyrimidine py 98.7 1E-08 2.2E-13 94.9 4.7 47 145-191 184-230 (272)
128 TIGR01684 viral_ppase viral ph 98.7 5.6E-08 1.2E-12 88.5 8.1 60 94-154 149-208 (301)
129 PRK10513 sugar phosphate phosp 98.7 1.2E-07 2.6E-12 87.6 10.1 65 145-212 192-256 (270)
130 PRK10976 putative hydrolase; P 98.6 1.5E-07 3.2E-12 86.8 8.2 48 145-192 186-233 (266)
131 TIGR02471 sucr_syn_bact_C sucr 98.6 2.2E-07 4.8E-12 84.1 9.0 48 143-190 153-200 (236)
132 PRK03669 mannosyl-3-phosphogly 98.6 8.7E-08 1.9E-12 88.6 6.3 48 145-192 183-233 (271)
133 TIGR02251 HIF-SF_euk Dullard-l 98.6 4.4E-08 9.6E-13 83.2 3.8 100 89-193 40-140 (162)
134 TIGR01525 ATPase-IB_hvy heavy 98.6 1.6E-07 3.5E-12 95.6 8.4 106 89-209 382-488 (556)
135 PF06941 NT5C: 5' nucleotidase 98.6 1.9E-07 4.2E-12 81.6 7.6 166 12-214 5-181 (191)
136 TIGR01485 SPP_plant-cyano sucr 98.5 1.8E-06 3.9E-11 78.8 14.0 51 143-193 161-211 (249)
137 PLN02887 hydrolase family prot 98.5 1.3E-07 2.8E-12 95.4 7.0 65 145-212 503-567 (580)
138 TIGR00099 Cof-subfamily Cof su 98.5 9.9E-08 2.1E-12 87.5 5.3 64 145-211 184-247 (256)
139 cd02064 FAD_synthetase_N FAD s 98.5 3.1E-07 6.7E-12 79.5 7.9 112 96-246 58-180 (180)
140 TIGR01512 ATPase-IB2_Cd heavy 98.5 2.7E-07 5.8E-12 93.5 7.7 111 89-214 360-474 (536)
141 PF05761 5_nucleotid: 5' nucle 98.4 9.7E-06 2.1E-10 79.3 15.7 105 90-194 182-326 (448)
142 TIGR02461 osmo_MPG_phos mannos 98.4 4.2E-07 9.2E-12 81.6 5.0 44 147-190 179-224 (225)
143 TIGR01511 ATPase-IB1_Cu copper 98.3 2.1E-06 4.5E-11 87.5 8.1 87 89-188 403-489 (562)
144 COG4087 Soluble P-type ATPase 98.2 7.6E-06 1.7E-10 64.7 8.6 115 89-214 28-142 (152)
145 PHA03398 viral phosphatase sup 98.2 3.3E-06 7.2E-11 77.1 7.3 51 94-145 151-201 (303)
146 TIGR01486 HAD-SF-IIB-MPGP mann 98.2 1.1E-06 2.4E-11 80.5 3.8 49 145-193 172-222 (256)
147 TIGR01675 plant-AP plant acid 98.2 5.7E-05 1.2E-09 67.2 14.0 101 89-193 118-223 (229)
148 PRK10671 copA copper exporting 98.1 5E-06 1.1E-10 88.7 7.7 88 90-189 649-736 (834)
149 KOG2630 Enolase-phosphatase E- 98.1 0.00015 3.3E-09 63.1 14.5 105 89-194 121-226 (254)
150 smart00775 LNS2 LNS2 domain. T 98.1 3.6E-05 7.8E-10 64.9 10.6 92 93-187 29-141 (157)
151 TIGR01522 ATPase-IIA2_Ca golgi 98.1 8.7E-06 1.9E-10 87.3 8.1 98 91-189 528-641 (884)
152 PF05116 S6PP: Sucrose-6F-phos 98.0 2.5E-05 5.5E-10 71.1 8.3 47 146-193 162-208 (247)
153 PLN02177 glycerol-3-phosphate 98.0 0.00018 3.9E-09 71.6 14.9 92 92-192 111-215 (497)
154 PRK14502 bifunctional mannosyl 97.9 1.8E-05 4E-10 80.2 6.7 47 147-193 611-659 (694)
155 PRK12702 mannosyl-3-phosphogly 97.9 0.00013 2.8E-09 67.0 11.2 44 147-190 206-251 (302)
156 COG4996 Predicted phosphatase 97.9 4.9E-05 1.1E-09 60.1 6.8 85 89-178 39-129 (164)
157 PLN02382 probable sucrose-phos 97.8 5.6E-05 1.2E-09 73.9 8.5 45 146-190 172-220 (413)
158 PF03767 Acid_phosphat_B: HAD 97.8 4E-05 8.6E-10 68.8 6.5 99 90-193 114-223 (229)
159 TIGR01680 Veg_Stor_Prot vegeta 97.7 0.00052 1.1E-08 62.3 12.3 103 89-193 143-250 (275)
160 PRK11033 zntA zinc/cadmium/mer 97.7 0.00012 2.6E-09 77.0 9.2 87 90-190 567-653 (741)
161 PF03031 NIF: NLI interacting 97.5 2.6E-05 5.6E-10 66.0 0.2 91 89-184 34-125 (159)
162 PF11019 DUF2608: Protein of u 97.4 0.0046 9.9E-08 56.3 14.3 104 91-194 81-211 (252)
163 TIGR01116 ATPase-IIA1_Ca sarco 97.4 0.00035 7.7E-09 75.3 8.1 116 91-210 537-672 (917)
164 PLN02645 phosphoglycolate phos 97.4 0.0011 2.3E-08 62.6 10.0 90 91-190 44-136 (311)
165 KOG2470 Similar to IMP-GMP spe 97.4 0.0033 7.3E-08 58.1 12.5 103 90-192 239-375 (510)
166 TIGR01497 kdpB K+-transporting 97.3 0.00063 1.4E-08 70.2 8.2 89 91-191 446-534 (675)
167 COG2217 ZntA Cation transport 97.2 0.00079 1.7E-08 69.7 7.2 89 90-190 536-624 (713)
168 COG3700 AphA Acid phosphatase 97.2 0.0044 9.6E-08 52.0 10.1 95 92-193 115-212 (237)
169 TIGR02250 FCP1_euk FCP1-like p 97.2 0.0011 2.3E-08 55.9 6.6 82 89-177 56-139 (156)
170 PRK01122 potassium-transportin 97.1 0.0015 3.3E-08 67.5 8.5 89 91-191 445-533 (679)
171 PRK14010 potassium-transportin 97.1 0.0024 5.1E-08 66.0 9.6 90 90-191 440-529 (673)
172 TIGR01517 ATPase-IIB_Ca plasma 97.1 0.0014 3E-08 71.1 7.7 99 91-190 579-693 (941)
173 PRK10517 magnesium-transportin 97.1 0.001 2.2E-08 71.5 6.6 98 91-191 550-663 (902)
174 TIGR01524 ATPase-IIIB_Mg magne 97.0 0.0014 3E-08 70.3 7.5 98 91-191 515-628 (867)
175 PRK15122 magnesium-transportin 96.9 0.0016 3.4E-08 70.1 6.8 97 91-190 550-662 (903)
176 TIGR01484 HAD-SF-IIB HAD-super 96.9 0.00094 2E-08 58.8 4.1 45 145-189 159-203 (204)
177 TIGR01647 ATPase-IIIA_H plasma 96.9 0.0022 4.7E-08 67.8 7.4 96 91-190 442-559 (755)
178 TIGR01523 ATPase-IID_K-Na pota 96.9 0.0026 5.7E-08 69.4 7.9 99 91-190 646-770 (1053)
179 COG2503 Predicted secreted aci 96.8 0.011 2.4E-07 52.2 9.9 85 89-181 120-209 (274)
180 PF13344 Hydrolase_6: Haloacid 96.5 0.013 2.8E-07 45.4 7.3 84 91-186 14-100 (101)
181 TIGR01689 EcbF-BcbF capsule bi 96.5 0.011 2.5E-07 47.6 7.1 29 92-120 25-53 (126)
182 PF08282 Hydrolase_3: haloacid 96.5 0.0035 7.6E-08 56.4 4.6 46 146-191 183-228 (254)
183 PF08235 LNS2: LNS2 (Lipin/Ned 96.4 0.023 4.9E-07 47.5 8.7 93 92-187 28-141 (157)
184 COG0474 MgtA Cation transport 96.3 0.013 2.8E-07 63.3 8.7 103 90-193 546-666 (917)
185 COG5663 Uncharacterized conser 96.3 0.035 7.5E-07 46.3 8.7 93 90-196 71-165 (194)
186 TIGR00685 T6PP trehalose-phosp 96.2 0.0061 1.3E-07 55.4 4.7 61 149-213 167-234 (244)
187 PLN02499 glycerol-3-phosphate 96.2 0.061 1.3E-06 53.1 11.5 78 99-182 101-189 (498)
188 TIGR01106 ATPase-IIC_X-K sodiu 96.2 0.017 3.7E-07 63.1 8.5 99 91-190 568-708 (997)
189 TIGR02245 HAD_IIID1 HAD-superf 96.1 0.021 4.6E-07 49.7 7.3 94 91-186 45-150 (195)
190 KOG0202 Ca2+ transporting ATPa 96.0 0.017 3.7E-07 59.6 6.9 100 90-190 583-702 (972)
191 PTZ00174 phosphomannomutase; P 95.9 0.0039 8.4E-08 56.8 1.8 44 145-192 184-231 (247)
192 TIGR01494 ATPase_P-type ATPase 95.9 0.038 8.2E-07 55.8 9.0 86 90-190 346-431 (499)
193 KOG0207 Cation transport ATPas 95.9 0.032 6.9E-07 58.2 8.2 90 90-191 722-811 (951)
194 PF05152 DUF705: Protein of un 95.8 0.028 6E-07 51.1 6.9 49 94-143 145-193 (297)
195 PLN02580 trehalose-phosphatase 95.8 0.039 8.4E-07 53.1 8.3 37 147-183 299-338 (384)
196 PF13344 Hydrolase_6: Haloacid 95.6 0.0072 1.6E-07 46.9 1.9 59 12-73 1-61 (101)
197 PF08282 Hydrolase_3: haloacid 95.4 0.035 7.5E-07 49.9 6.2 37 95-132 19-55 (254)
198 TIGR01452 PGP_euk phosphoglyco 95.4 0.11 2.5E-06 48.0 9.5 88 91-189 18-108 (279)
199 COG5610 Predicted hydrolase (H 95.3 0.065 1.4E-06 51.7 7.4 101 89-190 95-200 (635)
200 TIGR01657 P-ATPase-V P-type AT 95.2 0.1 2.3E-06 57.4 10.1 101 90-191 655-827 (1054)
201 PRK10187 trehalose-6-phosphate 95.1 0.06 1.3E-06 49.6 6.6 35 150-184 175-209 (266)
202 COG3769 Predicted hydrolase (H 95.0 0.12 2.6E-06 45.2 7.7 92 93-192 136-235 (274)
203 COG4030 Uncharacterized protei 94.9 0.55 1.2E-05 41.4 11.5 41 89-131 81-121 (315)
204 TIGR01652 ATPase-Plipid phosph 94.9 0.057 1.2E-06 59.5 7.0 122 90-214 630-815 (1057)
205 COG0647 NagD Predicted sugar p 94.9 0.21 4.5E-06 45.8 9.5 90 88-188 21-113 (269)
206 KOG2961 Predicted hydrolase (H 94.9 0.21 4.5E-06 41.1 8.3 97 90-196 60-171 (190)
207 TIGR01484 HAD-SF-IIB HAD-super 94.7 0.06 1.3E-06 47.2 5.3 32 94-125 20-51 (204)
208 cd02169 Citrate_lyase_ligase C 94.4 0.038 8.1E-07 51.6 3.6 78 114-218 207-284 (297)
209 COG3882 FkbH Predicted enzyme 94.2 0.28 6.1E-06 47.9 8.9 93 94-193 258-354 (574)
210 PRK10187 trehalose-6-phosphate 94.1 0.076 1.6E-06 48.9 4.9 14 10-23 15-28 (266)
211 PLN02423 phosphomannomutase 93.9 0.03 6.5E-07 50.9 1.7 44 145-193 185-232 (245)
212 PRK10444 UMP phosphatase; Prov 93.0 0.82 1.8E-05 41.6 9.6 51 91-141 17-69 (248)
213 COG4502 5'(3')-deoxyribonucleo 92.6 0.1 2.2E-06 42.2 2.6 139 8-185 2-147 (180)
214 COG2216 KdpB High-affinity K+ 92.2 0.43 9.4E-06 47.0 6.8 88 91-190 447-534 (681)
215 PLN03190 aminophospholipid tra 91.7 0.88 1.9E-05 50.6 9.4 49 166-216 872-920 (1178)
216 TIGR01457 HAD-SF-IIA-hyp2 HAD- 91.4 1.6 3.4E-05 39.7 9.5 49 92-141 18-69 (249)
217 PF05822 UMPH-1: Pyrimidine 5' 91.1 1.3 2.8E-05 39.9 8.2 94 89-184 88-198 (246)
218 KOG2134 Polynucleotide kinase 90.8 0.58 1.3E-05 44.5 6.0 95 92-189 105-230 (422)
219 KOG3128 Uncharacterized conser 90.0 3.5 7.5E-05 37.1 9.7 94 90-184 137-247 (298)
220 KOG2469 IMP-GMP specific 5'-nu 88.7 1.1 2.4E-05 42.9 6.1 99 96-194 203-335 (424)
221 KOG1618 Predicted phosphatase 88.6 0.76 1.6E-05 42.6 4.8 68 10-77 36-107 (389)
222 PRK14501 putative bifunctional 88.4 0.73 1.6E-05 48.8 5.4 34 92-125 515-549 (726)
223 PTZ00174 phosphomannomutase; P 88.2 0.62 1.3E-05 42.3 4.1 29 7-35 3-31 (247)
224 PLN02423 phosphomannomutase 88.1 0.62 1.3E-05 42.3 4.1 32 7-38 4-36 (245)
225 TIGR01658 EYA-cons_domain eyes 88.1 3.1 6.7E-05 37.3 8.1 78 111-194 179-259 (274)
226 smart00764 Citrate_ly_lig Citr 87.2 0.66 1.4E-05 40.0 3.5 78 113-217 91-168 (182)
227 TIGR01458 HAD-SF-IIA-hyp3 HAD- 86.9 0.87 1.9E-05 41.6 4.3 49 92-141 22-73 (257)
228 PLN02205 alpha,alpha-trehalose 86.5 1.3 2.9E-05 47.5 6.0 33 93-125 618-651 (854)
229 COG1877 OtsB Trehalose-6-phosp 86.5 5.6 0.00012 36.5 9.2 46 149-194 182-230 (266)
230 PF06574 FAD_syn: FAD syntheta 86.5 0.59 1.3E-05 39.3 2.7 80 96-202 64-154 (157)
231 KOG0204 Calcium transporting A 85.6 2.8 6.1E-05 44.1 7.4 99 90-189 646-762 (1034)
232 TIGR01460 HAD-SF-IIA Haloacid 83.9 8.5 0.00018 34.5 9.2 88 89-187 12-102 (236)
233 TIGR01456 CECR5 HAD-superfamil 82.3 4.6 0.0001 38.2 7.1 88 90-190 15-109 (321)
234 KOG2116 Protein involved in pl 82.2 8.5 0.00018 39.3 9.0 22 168-189 653-674 (738)
235 KOG4549 Magnesium-dependent ph 77.7 11 0.00024 30.2 6.5 82 89-176 42-133 (144)
236 KOG0206 P-type ATPase [General 77.0 24 0.00051 39.2 11.0 32 89-120 649-680 (1151)
237 PRK14501 putative bifunctional 77.0 3.2 6.9E-05 44.1 4.6 38 146-185 654-691 (726)
238 PRK00192 mannosyl-3-phosphogly 76.8 5.1 0.00011 36.8 5.4 41 94-135 24-64 (273)
239 PRK10513 sugar phosphate phosp 71.9 11 0.00023 34.4 6.2 37 95-132 24-60 (270)
240 PLN03017 trehalose-phosphatase 70.9 2.4 5.2E-05 40.7 1.7 38 147-184 281-321 (366)
241 KOG3189 Phosphomannomutase [Li 69.9 3.4 7.5E-05 35.7 2.2 27 11-37 13-39 (252)
242 PF06189 5-nucleotidase: 5'-nu 69.4 57 0.0012 29.7 9.9 75 107-195 186-261 (264)
243 PLN03064 alpha,alpha-trehalose 69.2 8.7 0.00019 41.6 5.6 36 90-125 621-657 (934)
244 TIGR02463 MPGP_rel mannosyl-3- 68.9 9.8 0.00021 33.5 5.1 36 96-132 21-56 (221)
245 TIGR02468 sucrsPsyn_pln sucros 68.7 37 0.00081 37.4 10.1 71 119-193 924-1002(1050)
246 COG4850 Uncharacterized conser 68.4 19 0.00041 33.8 6.7 85 89-180 194-293 (373)
247 TIGR00685 T6PP trehalose-phosp 68.2 2.8 6.1E-05 37.9 1.5 29 92-120 26-55 (244)
248 TIGR02461 osmo_MPG_phos mannos 67.5 11 0.00025 33.5 5.3 39 94-133 18-56 (225)
249 KOG2882 p-Nitrophenyl phosphat 67.5 67 0.0014 29.9 10.1 96 89-193 36-133 (306)
250 PLN03063 alpha,alpha-trehalose 67.3 9.2 0.0002 41.0 5.3 35 91-125 532-567 (797)
251 TIGR01487 SPP-like sucrose-pho 66.0 11 0.00023 33.2 4.7 40 92-132 19-58 (215)
252 PRK01158 phosphoglycolate phos 65.4 13 0.00028 32.9 5.2 41 92-133 21-61 (230)
253 PLN02205 alpha,alpha-trehalose 65.1 9.3 0.0002 41.2 4.8 40 146-185 759-801 (854)
254 KOG0209 P-type ATPase [Inorgan 65.1 7.5 0.00016 40.9 3.9 31 164-194 805-835 (1160)
255 PF08057 Ery_res_leader2: Eryt 64.8 2.4 5.1E-05 19.4 0.1 8 254-261 7-14 (14)
256 PLN02151 trehalose-phosphatase 64.3 3.9 8.4E-05 39.1 1.6 38 147-184 267-307 (354)
257 TIGR00099 Cof-subfamily Cof su 62.7 15 0.00033 33.1 5.3 38 94-132 19-56 (256)
258 PRK15126 thiamin pyrimidine py 60.1 16 0.00035 33.3 5.0 39 94-133 22-60 (272)
259 PTZ00445 p36-lilke protein; Pr 59.7 8.3 0.00018 33.9 2.7 16 7-22 41-56 (219)
260 PF13580 SIS_2: SIS domain; PD 59.0 91 0.002 25.2 8.8 98 95-192 23-137 (138)
261 PRK10976 putative hydrolase; P 58.6 18 0.00038 32.9 4.9 38 94-132 22-59 (266)
262 COG5083 SMP2 Uncharacterized p 58.5 10 0.00022 37.0 3.2 17 8-24 374-390 (580)
263 COG0731 Fe-S oxidoreductases [ 58.4 37 0.00081 31.6 6.9 38 88-125 89-127 (296)
264 TIGR01486 HAD-SF-IIB-MPGP mann 58.3 21 0.00045 32.4 5.3 36 96-132 21-56 (256)
265 KOG3040 Predicted sugar phosph 57.9 16 0.00035 32.1 4.1 88 92-191 24-115 (262)
266 smart00577 CPDc catalytic doma 57.8 6.9 0.00015 32.3 1.9 15 10-24 3-17 (148)
267 TIGR01482 SPP-subfamily Sucros 57.4 19 0.00041 31.7 4.8 38 94-132 18-55 (225)
268 PRK12702 mannosyl-3-phosphogly 57.4 20 0.00043 33.4 4.9 37 96-133 23-59 (302)
269 PRK10530 pyridoxal phosphate ( 56.4 21 0.00046 32.4 5.1 38 94-132 23-60 (272)
270 PLN02588 glycerol-3-phosphate 56.3 15 0.00033 36.8 4.2 39 99-142 138-176 (525)
271 COG0561 Cof Predicted hydrolas 56.0 22 0.00048 32.2 5.1 41 92-133 21-61 (264)
272 KOG3107 Predicted haloacid deh 53.9 41 0.00089 32.3 6.3 76 111-193 374-452 (468)
273 KOG0210 P-type ATPase [Inorgan 53.4 40 0.00087 35.1 6.6 114 91-213 711-827 (1051)
274 TIGR02251 HIF-SF_euk Dullard-l 51.6 8.6 0.00019 32.3 1.5 14 10-23 2-15 (162)
275 PRK03669 mannosyl-3-phosphogly 48.8 32 0.0007 31.4 5.0 36 96-132 29-64 (271)
276 TIGR02250 FCP1_euk FCP1-like p 46.9 13 0.00029 31.1 1.9 17 8-24 5-21 (156)
277 PF02358 Trehalose_PPase: Treh 46.8 25 0.00055 31.4 3.9 40 147-186 163-205 (235)
278 COG4850 Uncharacterized conser 46.2 2.7E+02 0.0058 26.4 10.5 23 136-161 279-301 (373)
279 PF02358 Trehalose_PPase: Treh 46.1 16 0.00036 32.6 2.5 11 13-23 1-11 (235)
280 TIGR02370 pyl_corrinoid methyl 45.3 1.9E+02 0.004 25.1 9.0 90 95-189 100-190 (197)
281 KOG1618 Predicted phosphatase 43.8 33 0.00071 32.2 4.0 51 145-195 268-343 (389)
282 PRK00994 F420-dependent methyl 42.5 2.6E+02 0.0056 25.2 9.9 87 100-193 23-117 (277)
283 KOG0323 TFIIF-interacting CTD 40.7 32 0.00068 35.6 3.8 55 89-145 199-255 (635)
284 COG0241 HisB Histidinol phosph 40.1 18 0.0004 31.0 1.8 17 9-25 5-21 (181)
285 PHA02530 pseT polynucleotide k 39.9 73 0.0016 29.4 6.0 15 9-23 158-172 (300)
286 PRK11840 bifunctional sulfur c 35.1 4E+02 0.0086 25.3 11.0 97 89-195 176-281 (326)
287 PF06014 DUF910: Bacterial pro 34.9 24 0.00052 24.5 1.3 25 154-182 7-31 (62)
288 TIGR00190 thiC thiamine biosyn 34.9 2.7E+02 0.0058 27.2 8.7 57 69-125 136-193 (423)
289 COG1964 Predicted Fe-S oxidore 34.6 1.8E+02 0.0038 28.8 7.5 133 89-258 120-260 (475)
290 PF14336 DUF4392: Domain of un 33.7 1.8E+02 0.0039 27.1 7.4 27 93-119 62-88 (291)
291 PRK13352 thiamine biosynthesis 33.6 4.7E+02 0.01 25.7 10.4 57 69-125 139-196 (431)
292 PRK15317 alkyl hydroperoxide r 33.2 2.1E+02 0.0046 28.9 8.5 101 89-193 127-242 (517)
293 KOG0203 Na+/K+ ATPase, alpha s 31.2 41 0.00089 35.8 2.9 98 91-190 590-730 (1019)
294 TIGR01485 SPP_plant-cyano sucr 31.1 1E+02 0.0022 27.6 5.3 44 95-140 25-68 (249)
295 TIGR03140 AhpF alkyl hydropero 29.7 2.7E+02 0.0059 28.2 8.6 101 89-193 128-243 (515)
296 PF04413 Glycos_transf_N: 3-De 29.1 1.2E+02 0.0026 26.1 5.1 79 89-179 103-185 (186)
297 PRK13125 trpA tryptophan synth 28.5 4.3E+02 0.0094 23.7 10.2 94 94-193 116-215 (244)
298 KOG2469 IMP-GMP specific 5'-nu 28.0 66 0.0014 31.3 3.4 18 6-23 24-41 (424)
299 PF03622 IBV_3B: IBV 3B protei 27.6 70 0.0015 21.8 2.5 38 344-381 12-54 (64)
300 TIGR02329 propionate_PrpR prop 27.6 2.8E+02 0.0061 28.3 8.1 88 95-194 85-172 (526)
301 cd06537 CIDE_N_B CIDE_N domain 26.8 52 0.0011 24.1 2.0 18 10-27 40-57 (81)
302 TIGR02826 RNR_activ_nrdG3 anae 26.7 1.8E+02 0.004 23.9 5.6 25 94-118 75-99 (147)
303 cd06539 CIDE_N_A CIDE_N domain 26.3 55 0.0012 23.9 2.0 19 9-27 40-58 (78)
304 COG0825 AccA Acetyl-CoA carbox 26.3 31 0.00068 31.8 1.0 107 145-302 127-238 (317)
305 smart00266 CAD Domains present 26.1 60 0.0013 23.4 2.2 19 9-27 38-56 (74)
306 PF09338 Gly_reductase: Glycin 26.0 3.8E+02 0.0083 26.4 8.3 42 127-194 300-341 (428)
307 PF07535 zf-DBF: DBF zinc fing 25.9 16 0.00035 24.0 -0.7 20 332-351 29-48 (49)
308 PLN02887 hydrolase family prot 25.6 1.6E+02 0.0034 30.5 6.0 41 91-132 325-365 (580)
309 TIGR00262 trpA tryptophan synt 24.5 5.4E+02 0.012 23.4 9.8 97 92-193 125-228 (256)
310 PRK14502 bifunctional mannosyl 24.4 1.3E+02 0.0028 31.6 5.1 40 92-132 434-473 (694)
311 COG3882 FkbH Predicted enzyme 24.3 41 0.0009 33.4 1.4 15 8-22 221-235 (574)
312 KOG1605 TFIIF-interacting CTD 24.2 43 0.00094 30.6 1.5 93 91-188 131-224 (262)
313 PF14819 QueF_N: Nitrile reduc 24.2 76 0.0016 24.8 2.6 21 338-358 82-102 (110)
314 TIGR00640 acid_CoA_mut_C methy 24.0 3.8E+02 0.0083 21.5 8.3 85 99-190 22-110 (132)
315 cd01615 CIDE_N CIDE_N domain, 23.6 71 0.0015 23.3 2.2 18 10-27 41-58 (78)
316 PF01993 MTD: methylene-5,6,7, 23.2 2.5E+02 0.0055 25.3 5.9 80 107-193 30-116 (276)
317 PF05673 DUF815: Protein of un 22.9 4E+02 0.0086 24.2 7.3 53 96-150 69-121 (249)
318 cd06536 CIDE_N_ICAD CIDE_N dom 22.3 71 0.0015 23.4 2.0 18 10-27 43-60 (80)
319 PF00875 DNA_photolyase: DNA p 21.4 1.3E+02 0.0027 25.1 3.7 46 95-145 54-99 (165)
320 PRK01060 endonuclease IV; Prov 20.9 6.1E+02 0.013 22.9 8.6 89 92-195 10-112 (281)
321 cd00733 GlyRS_alpha_core Class 20.9 1.3E+02 0.0029 27.2 3.8 38 152-189 89-129 (279)
322 PRK15424 propionate catabolism 20.6 4.3E+02 0.0094 27.0 7.9 88 95-194 95-182 (538)
323 cd04728 ThiG Thiazole synthase 20.4 6.5E+02 0.014 22.8 9.9 98 89-196 102-208 (248)
324 PF08285 DPM3: Dolichol-phosph 20.4 85 0.0018 23.7 2.1 25 339-363 62-86 (91)
325 TIGR02471 sucr_syn_bact_C sucr 20.3 2.2E+02 0.0047 25.2 5.3 36 103-140 26-61 (236)
No 1
>PLN02940 riboflavin kinase
Probab=100.00 E-value=6.2e-79 Score=585.72 Aligned_cols=372 Identities=81% Similarity=1.332 Sum_probs=336.0
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
...+++|+||+||||+|+...+..++..+++++|..++.+......|.+..+.+..++..++.+...+++...+.+.+..
T Consensus 8 ~~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (382)
T PLN02940 8 KKLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSE 87 (382)
T ss_pred cccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 34599999999999999999999999999999998888777788888888888888888888777777777777777776
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCC
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p 165 (383)
......++||+.++|+.|+++|++++|+||++...+...+.+..++..+|+.+++++++..+||+|+++..+++++|++|
T Consensus 88 ~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p 167 (382)
T PLN02940 88 QWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEP 167 (382)
T ss_pred HHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCCh
Confidence 66778899999999999999999999999999998888883378999999999999999999999999999999999999
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeeee
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVK 245 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~~ 245 (383)
++|++|||+.+|+++|+++|+.++++.++.........++.++.++.++....+.+|++++|+...||+|||+++|+|+|
T Consensus 168 ~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~~~~~~~~~~~~~~~~~~~~~y~~~G~Vv~ 247 (382)
T PLN02940 168 SNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFNDWIEGTLPIEPWHIGGPVIK 247 (382)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCHHHcCCCCccccccCcCCcCCEEEEEEEEe
Confidence 99999999999999999999999999886543333456788999999999888999999999999999999999999999
Q ss_pred cccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEEec-cCCCccccCC
Q 016755 246 GLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLL-HEFDEDFYDE 324 (383)
Q Consensus 246 G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~~~-~~f~~~~yg~ 324 (383)
|+++||+.||||||||.+++..+++|.|+.|||++|+.++++.+|+||+|||+||||++++.++||||| | |++|+||+
T Consensus 248 G~~~G~~~lg~PTaNl~~~~~~~~~~~p~~GVY~~~~~~~~~~~~~~v~niG~~Pt~~~~~~~~E~~i~~d-f~~dlyg~ 326 (382)
T PLN02940 248 GFGRGSKVLGIPTANLSTENYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFNNTEKTIEPWLLHD-FGEDFYGE 326 (382)
T ss_pred CCccCcccCCCCcccCCcchhhhhcCCCCCEEEEEEEEECCCceEEEEEEecCCCccCCCccEEEEEEeCC-CCCCCCCC
Confidence 999999548999999998765246665579999999999654689999999999999876778999999 7 99999999
Q ss_pred eEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCCcccccccCCCCcccc
Q 016755 325 ELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKIT 378 (383)
Q Consensus 325 ~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (383)
+|+|.|++|||+|+||+|+|+|++||++|++.||++|+.|+|+.|+++.||..|
T Consensus 327 ~i~v~~~~~lR~e~kF~~~~~L~~qi~~D~~~a~~~~~~~~~~~~~~~~~~~~~ 380 (382)
T PLN02940 327 ELRLVIVGYIRPEANFPSLESLIAKIHEDRRIAEKALDLPLYAKYKDDPYLTNS 380 (382)
T ss_pred eEEEEEehhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCchhhhhccChhhccC
Confidence 999999999999999999999999999999999999999999999999999544
No 2
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase. multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).
Probab=100.00 E-value=1.7e-48 Score=356.82 Aligned_cols=221 Identities=26% Similarity=0.346 Sum_probs=183.3
Q ss_pred HHHHHHHHHCCCCEEE--------EeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCC---ChHHHHHHHHHcCCCC
Q 016755 97 NRLIKHLSCHGVPMAL--------ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP---SPDIFLEAAKRLNMEP 165 (383)
Q Consensus 97 ~~lL~~L~~~G~~~~i--------~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp---~p~~~~~~~~~lg~~p 165 (383)
.+-++.+.+.|+...+ ...++++|++..+.+.++. +.+++|+|+.+|+. +.+.++..
T Consensus 57 ~~k~~~l~~~Gvd~~~~~~F~~~~a~ls~e~Fi~~~l~~~l~~----~~ivvG~Df~FG~~~~G~~~~L~~~-------- 124 (288)
T TIGR00083 57 EDKARQLQIKGVEQLLVVVFDEEFANLSALQFIDQLIVKHLHV----KFLVVGDDFRFGHDRQGDFLLLQLF-------- 124 (288)
T ss_pred HHHHHHHHHcCCCEEEEeCCCHHHHcCCHHHHHHHHHHhccCC----cEEEECCCccCCCCCCCCHHHHHHh--------
Confidence 5566777777877544 3456788888877455665 89999999998865 44555444
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeeee
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVK 245 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~~ 245 (383)
++..|+.+..++....+ ... |++.+++.+.+++... |+++||+||+++|+|+|
T Consensus 125 ---------------~~~~g~~v~~~~~~~~~-~~I-SST~IR~~l~~G~i~~----------A~~lLGr~y~i~G~Vv~ 177 (288)
T TIGR00083 125 ---------------GNTTIFCVIVKQLFCQD-IRI-SSSAIRQALKNGDLEL----------ANKLLGRPYFICGTVIH 177 (288)
T ss_pred ---------------ccccCcEEEEeccccCC-CeE-CHHHHHHHHHcCCHHH----------HHHhhhhhhccceEEEe
Confidence 44567777777775444 444 4467777777788775 99999999999999999
Q ss_pred cccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEEeccCCCccccCCe
Q 016755 246 GLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEE 325 (383)
Q Consensus 246 G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~~~~~f~~~~yg~~ 325 (383)
|+++||+ ||||||||.+++. +++| +.|||++++.++ +.+|+||+|||.||||++.+.++|+|||| |++|+||++
T Consensus 178 G~~~Gr~-lGfPTaNl~~~~~-~~~p--~~GVYa~~v~i~-~~~y~~v~niG~~PT~~~~~~~~E~~ild-f~~dlYg~~ 251 (288)
T TIGR00083 178 GQKLGRT-LGFPTANIKLKNQ-VLPL--KGGYYVVVVLLN-GEPYPGVGNIGNRPTFIGQQLVIEVHLLD-FSGELYGQE 251 (288)
T ss_pred cCCCccc-ccCceEEecCccc-ccCC--CcceEEEEEEeC-CeEEEEEEEeCCCCccCCCceEEEEEeCC-CCcccCCCE
Confidence 9999996 9999999998875 5666 489999999984 58899999999999998766789999998 999999999
Q ss_pred EEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 016755 326 LHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD 362 (383)
Q Consensus 326 ~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~ 362 (383)
++|+|++|||+|+||+|+|+|++||++|++.||++|+
T Consensus 252 i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~ar~~~~ 288 (288)
T TIGR00083 252 IKVTLVKKIRPEQKFSSLDELKNQIQQDILQAKKWFN 288 (288)
T ss_pred EEEEeHHhccCCCCcCCHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999874
No 3
>PF01687 Flavokinase: Riboflavin kinase; InterPro: IPR015865 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents the riboflavin kinase domains from bacteria and eukaryotes.; GO: 0008531 riboflavin kinase activity, 0009231 riboflavin biosynthetic process; PDB: 1Q9S_A 1NB9_A 1P4M_A 1NB0_A 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A ....
Probab=100.00 E-value=1.7e-48 Score=311.87 Aligned_cols=125 Identities=40% Similarity=0.727 Sum_probs=110.1
Q ss_pred CCCCceeeeeeeeecccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEE
Q 016755 232 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEP 311 (383)
Q Consensus 232 llg~p~~~~G~v~~G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~ 311 (383)
|||+||+++|+|+||+++||+ ||||||||.+++. .++|. .|||++|+.++ +++|+||+|||+||||++...+|||
T Consensus 1 LLG~py~i~G~Vv~G~~~Gr~-lGfPTANl~~~~~-~~~p~--~GVYa~~v~~~-~~~~~~v~niG~~PTf~~~~~~vE~ 75 (125)
T PF01687_consen 1 LLGRPYSISGTVVHGFGRGRK-LGFPTANLDIPDD-KLLPK--EGVYAVWVRVD-GKWYPGVTNIGYRPTFDGKERTVEV 75 (125)
T ss_dssp HHTSSEEEEEEEEC-SSCCCC-TTS-EEEEEEHCC-CTCCC--TEEEEEEEEET-SEEEEEEEEEEEETTTSSCEEEEEE
T ss_pred CcCCCEEEEEEEEeCCccccc-cCCccccccCCcc-ccccc--CEEEEEEEEEC-CEEEEeEEEecCCCccCcCceeEEE
Confidence 479999999999999999996 9999999999665 77784 79999999994 5899999999999999888899999
Q ss_pred EeccCCCccccCCeEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 016755 312 WLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD 362 (383)
Q Consensus 312 ~~~~~f~~~~yg~~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~ 362 (383)
|||| |++|+||++++|+|++|||+|+||+|+|+|++||++|++.||++|.
T Consensus 76 hild-f~~dlYg~~i~v~~~~~lR~e~kF~s~e~L~~qI~~D~~~a~~~lq 125 (125)
T PF01687_consen 76 HILD-FDGDLYGKKIKVEFLKFLRPEKKFDSLEELKEQIKKDIEQARKYLQ 125 (125)
T ss_dssp EETT-SSSE-TTSEEEEEEEEEEEE----SSHHHHHHHHHHHHHHHHHHH-
T ss_pred EEec-cCcccCCCeEEEEEEeCccCCcccCCHHHHHHHHHHHHHHHHHhcC
Confidence 9998 9999999999999999999999999999999999999999999984
No 4
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed
Probab=100.00 E-value=7.1e-46 Score=343.10 Aligned_cols=222 Identities=29% Similarity=0.385 Sum_probs=182.7
Q ss_pred HHHHHHHHHHCCCCEEEE--------eCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCC---ChHHHHHHHHHcCCC
Q 016755 96 ANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP---SPDIFLEAAKRLNME 164 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~--------s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp---~p~~~~~~~~~lg~~ 164 (383)
..+-++.+++.|+...++ ..++++|++.++.+.++. +.+++|+|+++|+. +.+.++..
T Consensus 72 ~eeR~~~l~~~gVD~~~~~~F~~~~~~ls~e~Fi~~~l~~~l~~----~~iVvG~Df~FG~~~~G~~~~L~~~------- 140 (305)
T PRK05627 72 LRDKAELLAELGVDYVLVLPFDEEFAKLSAEEFIEDLLVKGLNA----KHVVVGFDFRFGKKRAGDFELLKEA------- 140 (305)
T ss_pred HHHHHHHHHHcCCCEEEEecCCHHHhcCCHHHHHHHHHHhccCC----CEEEECCCCCCCCCCCCCHHHHHHH-------
Confidence 345566667777776654 336788888766455665 89999999998864 44445444
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeee
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVV 244 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~ 244 (383)
++..|+.++.++....+.... +++.+++.+.+++... |+++||+||+++|+|+
T Consensus 141 ----------------~~~~g~~v~~v~~~~~~~~~I-SST~IR~~I~~G~i~~----------A~~lLg~~y~~~g~V~ 193 (305)
T PRK05627 141 ----------------GKEFGFEVTIVPEVKEDGERV-SSTAIRQALAEGDLEL----------ANKLLGRPYSISGRVV 193 (305)
T ss_pred ----------------HHHcCcEEEEeccEecCCCcC-chHHHHHHHHcCCHHH----------HHhhhcCCCceEEEEE
Confidence 455677777777754444444 4477777777787775 9999999999999999
Q ss_pred ecccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEEeccCCCccccCC
Q 016755 245 KGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDE 324 (383)
Q Consensus 245 ~G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~~~~~f~~~~yg~ 324 (383)
||+++||+ |||||||+.+++. .+ | +.|||++|+.++ +.+|+||+|||+||||++++.++|+|||| |++|+||+
T Consensus 194 ~G~~~Gr~-lgfPTaNl~~~~~-~~-p--~~GVY~~~~~i~-~~~y~~~~~iG~~ptf~~~~~~~E~~i~d-f~~d~Yg~ 266 (305)
T PRK05627 194 HGQKLGRT-LGFPTANLPLPDR-VL-P--ADGVYAVRVKVD-GKPYPGVANIGTRPTVDGGRQLLEVHLLD-FNGDLYGE 266 (305)
T ss_pred ECcccCcc-ccceeEeecCccC-CC-C--CceEEEEEEEEC-CEEEEEEEEecCCCccCCCceEEEEEecC-CCCccCCC
Confidence 99999996 9999999998775 44 6 489999999995 58999999999999998767789999998 99999999
Q ss_pred eEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 016755 325 ELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD 362 (383)
Q Consensus 325 ~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~ 362 (383)
+++|+|++|||+|+||+|++||++||++|++.||++|.
T Consensus 267 ~i~v~~~~~iR~e~kF~s~~~L~~~i~~D~~~a~~~~~ 304 (305)
T PRK05627 267 HITVEFLKKLRDEQKFDSLDELKAQIAKDIETARAFLA 304 (305)
T ss_pred EEEEEEhhhcCCCCCcCCHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999985
No 5
>COG0196 RibF FAD synthase [Coenzyme metabolism]
Probab=100.00 E-value=2.7e-45 Score=334.53 Aligned_cols=220 Identities=30% Similarity=0.458 Sum_probs=182.7
Q ss_pred HHHHHHHHHHCCCCEE--------EEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChH---HHHHHHHHcCCC
Q 016755 96 ANRLIKHLSCHGVPMA--------LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD---IFLEAAKRLNME 164 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~--------i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~---~~~~~~~~lg~~ 164 (383)
..+-++.|...|+... +.+.++++|++..+ +.+.. +.+++|+|+.+||.... .++..
T Consensus 74 ~~~k~~~l~~~gvd~~~v~~F~~~fa~ls~~~Fv~~lv-~~l~~----k~ivvG~DF~FGk~~~g~~~~L~~~------- 141 (304)
T COG0196 74 LREKIRLLAGYGVDALVVLDFDLEFANLSAEEFVELLV-EKLNV----KHIVVGFDFRFGKGRQGNAELLREL------- 141 (304)
T ss_pred HHHHHHHHHhcCCcEEEEEeCCHhHhhCCHHHHHHHHH-hccCC----cEEEEecccccCCCCCCCHHHHHHh-------
Confidence 3455677777786554 34667888998444 66665 78999999999986432 22222
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeee
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVV 244 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~ 244 (383)
+++ |+.++.++....+.... +++.+++.+.+++... |+.+||+||+++|+|+
T Consensus 142 ----------------~~~-gf~v~~v~~~~~~~~~i-SSt~IR~~L~~gdl~~----------A~~lLG~py~i~G~Vv 193 (304)
T COG0196 142 ----------------GQK-GFEVTIVPKINEEGIRI-SSTAIRQALREGDLEE----------ANKLLGRPYSIEGKVV 193 (304)
T ss_pred ----------------ccC-CceEEEeccEecCCcEE-chHHHHHHHhcCCHHH----------HHHhcCCCeEEEEEEE
Confidence 445 88999998876655554 4477777777887775 9999999999999999
Q ss_pred ecccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEEeccCCCccccCC
Q 016755 245 KGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDE 324 (383)
Q Consensus 245 ~G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~~~~~f~~~~yg~ 324 (383)
||+++||+ ||||||||.++.. ++| +.|||++++.+.+ ..|+||+|||+||||++..+++|+|+|| |++|+||+
T Consensus 194 ~G~~~Gr~-lGfPTaNi~~~~~--~~~--~~GVYav~v~~~~-~~~~gv~~vG~rpt~~~~~~~lEvhi~D-f~~dlYG~ 266 (304)
T COG0196 194 HGQKLGRT-LGFPTANIYLKDN--VLP--AFGVYAVRVKLDG-GVYPGVANVGYRPTVDGSERSLEVHILD-FNGDLYGE 266 (304)
T ss_pred cccccccc-cCCCccccccccc--ccc--CCeeEEEEEEECC-ccccceEEecccccccCCeeEEEEEEec-ccccccCc
Confidence 99999995 9999999999884 445 4899999999965 4499999999999998878899999999 99999999
Q ss_pred eEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 016755 325 ELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD 362 (383)
Q Consensus 325 ~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~ 362 (383)
.++|.|++|||+|+||+|+|+|++||++|++.||++|+
T Consensus 267 ~i~v~~~~~iR~e~kF~s~d~L~~qi~~D~~~Ar~~~~ 304 (304)
T COG0196 267 RVKVRFLKFIRDEKKFDSLDELKEQIEKDIERARKLLA 304 (304)
T ss_pred eEEEEEhhhcccccCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999984
No 6
>KOG3110 consensus Riboflavin kinase [Coenzyme transport and metabolism]
Probab=100.00 E-value=1.9e-41 Score=261.37 Aligned_cols=149 Identities=54% Similarity=1.020 Sum_probs=136.1
Q ss_pred cCCCCCCceeeeeeeeecccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcce
Q 016755 229 EGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKT 308 (383)
Q Consensus 229 a~~llg~p~~~~G~v~~G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~ 308 (383)
+..+.-.||.+.|.||+|.+||+++||+||||+..+....++-....|||.+|+.++.+.+|+.++||||||.+.++..+
T Consensus 5 ~~~~~~~P~~~~g~VVrGFGRGskeLGiPTAN~~~~~v~~l~~~l~~GvYfG~A~v~~~~v~kMvmSIGwNP~Y~N~~Kt 84 (153)
T KOG3110|consen 5 AQPMSPLPLFFGGEVVRGFGRGSKELGIPTANFPENVVPKLPEDLPSGVYFGWAHVDKGDVFKMVMSIGWNPYYKNKKKT 84 (153)
T ss_pred cccCCCCCEEecCeEEEecCCCccccCCccCCCCHHHHhcccccCCCceEEEeeeecCCCceeEEEEcccCcccCCcccc
Confidence 44455679999999999999999999999999987554344444457999999999877899999999999999998999
Q ss_pred EEEEeccCCCccccCCeEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCCcccccccCCCCccc
Q 016755 309 IEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKI 377 (383)
Q Consensus 309 ~e~~~~~~f~~~~yg~~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ 377 (383)
+|+|++++|..|+||+++++.+++|||||++|+|+|+|++.|+.|++.|++.|+.|.+++|++++||++
T Consensus 85 ~E~hlih~f~~DFYge~l~~~IvGyiRpe~nf~slesLi~~I~~Di~vA~~~l~~p~~~k~K~dpff~~ 153 (153)
T KOG3110|consen 85 MELHLIHDFGEDFYGETLKVIIVGYIRPELNFDSLESLIEAIHGDIEVAKKVLDLPEYAKFKEDPFFTV 153 (153)
T ss_pred eeeeeehhcccchhhheeeEEEEEeeccccCcchHHHHHHHHHhhHHHHHHhhcCcchhhhccCCcccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999953
No 7
>PRK07143 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=267.42 Aligned_cols=198 Identities=17% Similarity=0.117 Sum_probs=153.5
Q ss_pred HHHHHHHHHCCCCEEEE--------eCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 97 NRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 97 ~~lL~~L~~~G~~~~i~--------s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
.+-++.+++.|+...++ ..++++|++.++ . ++. +.+++|+|+.+|+....-...
T Consensus 68 ~er~~~l~~~Gvd~~~~~~F~~~~a~ls~e~Fi~~ll-~-l~~----~~iVvG~Df~FG~~r~G~~~~------------ 129 (279)
T PRK07143 68 NSRLQTLANLGFKNIILLDFNEELQNLSGNDFIEKLT-K-NQV----SFFVVGKDFRFGKNASWNADD------------ 129 (279)
T ss_pred HHHHHHHHHCCCCEEEEeCCCHHHhCCCHHHHHHHHH-h-cCC----CEEEECCCcccCCCCCCCHHH------------
Confidence 45556677778766544 336788888765 4 444 789999999998754322222
Q ss_pred EEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeeeeccc
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLG 248 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~~G~~ 248 (383)
.++.+-.+..++....++... |++.|++.+.+++... |++||||||+++|+|+||
T Consensus 130 ------------L~~~~~~v~~v~~~~~~g~~I-SST~IR~~l~~G~i~~----------A~~lLGr~y~i~G~V~~G-- 184 (279)
T PRK07143 130 ------------LKEYFPNVHIVEILKINQQKI-STSLLKEFIEFGDIEL----------LNSLLLYNYSISITINKN-- 184 (279)
T ss_pred ------------HHHhCCcEEEeCCEEcCCcEE-cHHHHHHHHHcCCHHH----------HHHHcCCCcEEEEEEECC--
Confidence 111111444555543334444 4467777777787775 999999999999999998
Q ss_pred CCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEEeccCCCc--cccCCeE
Q 016755 249 RGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDE--DFYDEEL 326 (383)
Q Consensus 249 ~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~~~~~f~~--~~yg~~~ 326 (383)
||+.+++. +++| +.|||+|+|.+ ++.+|+||+|||.||| +|||||| |++ |+|| ++
T Consensus 185 ----------aNl~~~~~-~~~P--~~GVYa~~v~~-~~~~y~~v~niG~~PT-------iE~hild-f~~~~dlYg-~i 241 (279)
T PRK07143 185 ----------FEFTYPQN-IIKL--HAGIYLAYVVI-NNFKYHGILKINFNNK-------NKIKFFD-FDLIINKYQ-EI 241 (279)
T ss_pred ----------eEeCCCcC-cCCC--CCcEEEEEEEE-CCEEEEEEEEecCCce-------EEEEEec-CCCCcCCCC-EE
Confidence 89998775 6777 48999999998 4589999999999999 8999999 999 8999 99
Q ss_pred EEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCCc
Q 016755 327 HLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLP 364 (383)
Q Consensus 327 ~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~~ 364 (383)
+|+|++|||+|+||+| + +||++|++.||++|+..
T Consensus 242 ~v~f~~~iR~e~kF~s-~---~qi~~D~~~a~~~~~~~ 275 (279)
T PRK07143 242 FIEIVKEIRIISSNED-N---NILNDDIEIAKKFFLNN 275 (279)
T ss_pred EEEEhhccCCCcCCCc-H---HHHHHHHHHHHHHHHhh
Confidence 9999999999999999 5 89999999999999643
No 8
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.97 E-value=4.1e-29 Score=224.41 Aligned_cols=209 Identities=22% Similarity=0.381 Sum_probs=172.0
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCh-hhhhhhcCCCHHHHHHHHHHHhCC-CCCHHHHHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPLEEAAIIVEDYGL-PCAKHEFVNEVYSMF 83 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 83 (383)
..++++|+||+||||+|+.+.+..++.+++.++|.+.+. .......|.........+....+. ......+...+.+.+
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARV 83 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 446999999999999999999999999999999987765 455667777766666555554443 223344445554444
Q ss_pred Hhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 84 SDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 84 ~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
.+.. ....++||+.++|+.|+++|++++++||+....++..+ +.+++..+|+.+++++++..+||+|+.++.+++++|
T Consensus 84 ~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 162 (222)
T PRK10826 84 ISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVL-TMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLG 162 (222)
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH-HhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcC
Confidence 4433 45789999999999999999999999999999988888 889999999999999999999999999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcc-ccccccchhhccccccC
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDLR 215 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~-~~~~~a~~vi~~l~e~~ 215 (383)
++|++|++|||+.+|+++|+++|+++++++...... .....++.++.++.++.
T Consensus 163 ~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 163 VDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred CCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence 999999999999999999999999999998865432 22345688889988863
No 9
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.96 E-value=1e-28 Score=220.88 Aligned_cols=187 Identities=34% Similarity=0.519 Sum_probs=162.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHh
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFVNEVYSMFSD 85 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 85 (383)
++++|||||||||+|+...+.++|.++++++|...+.+......|....+....+........ ..........+....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEAL 80 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999999888888888777777776666654432 222333333333444
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCC
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p 165 (383)
......+.||+.++|+.|+++|++++++|+++...++..+ ...|+.++|+.+++++++..+||+|+.|..+++++|++|
T Consensus 81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L-~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P 159 (221)
T COG0637 81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVL-ARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDP 159 (221)
T ss_pred hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHH-HHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCCh
Confidence 4567899999999999999999999999999999999888 889999999999999999999999999999999999999
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
++|++|+|+++++++|++|||.+++++...
T Consensus 160 ~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~ 189 (221)
T COG0637 160 EECVVVEDSPAGIQAAKAAGMRVVGVPAGH 189 (221)
T ss_pred HHeEEEecchhHHHHHHHCCCEEEEecCCC
Confidence 999999999999999999999999999843
No 10
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.96 E-value=1.8e-28 Score=219.67 Aligned_cols=207 Identities=26% Similarity=0.415 Sum_probs=175.7
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
+++++|+||+||||+|+...+..+++.+++++|.+ ..........|.+....+............. +..+.+...+..
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAA-ELVERLREEFLT 80 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHH-HHHHHHHHHHHH
Confidence 57899999999999999999999999999999998 7888888999999988877665443332211 344445555544
Q ss_pred hhcc---CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 86 HLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 86 ~~~~---~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
.... ..++||+.++|..|+++|++++++||.+...++..+ +.+|+.++|+.++++++....||+|..+..+++++|
T Consensus 81 ~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l-~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~ 159 (220)
T COG0546 81 AYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILL-KALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLG 159 (220)
T ss_pred HHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-HHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhC
Confidence 4432 579999999999999999999999999999999999 889999999999998889999999999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCc-c-ccccccchhhccccccC
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-T-HRYTAADEVINSLLDLR 215 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~-~-~~~~~a~~vi~~l~e~~ 215 (383)
++|++++||||+.+|+.+|++||+.++.|.++... . .....++.+++++.++.
T Consensus 160 ~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~ 214 (220)
T COG0546 160 LDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELL 214 (220)
T ss_pred CChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHH
Confidence 99899999999999999999999999999998642 2 22456789999998854
No 11
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.96 E-value=1.6e-28 Score=224.06 Aligned_cols=206 Identities=26% Similarity=0.352 Sum_probs=163.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCC----CCChhhh-hhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK----EWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYS 81 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (383)
.++++|+|||||||+|+...+..++.++++++|. +.+.+.+ ....|.+..+.+..++.. ... ...++...+..
T Consensus 20 ~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~-~~~~~~~~~~~ 97 (248)
T PLN02770 20 APLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPD-DLE-RGLKFTDDKEA 97 (248)
T ss_pred CccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCc-chh-hHHHHHHHHHH
Confidence 4689999999999999999999999999999864 3444433 355676666665544321 111 11122233344
Q ss_pred HHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHH
Q 016755 82 MFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 82 ~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~ 160 (383)
.+.... ....++||+.++|+.|+++|++++|+||+....++..+ +++|+..+|+.+++++++..+||+|++|..++++
T Consensus 98 ~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~ 176 (248)
T PLN02770 98 LFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMI-SLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEV 176 (248)
T ss_pred HHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HHcCChhhCcEEEecCcCCCCCCChHHHHHHHHH
Confidence 444433 35789999999999999999999999999999999989 8899999999999999999999999999999999
Q ss_pred cCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc-ccccchhhccccccC
Q 016755 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLR 215 (383)
Q Consensus 161 lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~-~~~a~~vi~~l~e~~ 215 (383)
+|++|++|++|||+..|+++|+++|+.++++.++...... ...++.+++++.++.
T Consensus 177 ~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~ 232 (248)
T PLN02770 177 LKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK 232 (248)
T ss_pred hCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence 9999999999999999999999999999999886433222 236788888888743
No 12
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.96 E-value=1.3e-28 Score=219.84 Aligned_cols=203 Identities=23% Similarity=0.352 Sum_probs=165.5
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
|++++|+||+||||+|+...+..++.+++++++.. .+.+......|.+..+.+..+ . +...+.+...+...+..
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~ 75 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKI----D-ESKVEEMITTYREFNHE 75 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHhc----C-HHHHHHHHHHHHHHHHH
Confidence 35899999999999999999999999999998764 566667777787766655432 1 11233333444443333
Q ss_pred hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 86 ~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
.. ....++||+.++|+.|+++|++++++||+....+...+ +.+|+..+|+.+++++++..+||+|+.+..++++++++
T Consensus 76 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~ 154 (214)
T PRK13288 76 HHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGL-KLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAK 154 (214)
T ss_pred hhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence 22 35679999999999999999999999999999999888 88999999999999999999999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccC
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR 215 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~ 215 (383)
|++|++|||+++|+++|+++|+.++++.++...... ...++.+++++.++.
T Consensus 155 ~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~ 207 (214)
T PRK13288 155 PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLL 207 (214)
T ss_pred HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHH
Confidence 999999999999999999999999999887543222 235678888888754
No 13
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.96 E-value=1.5e-28 Score=224.68 Aligned_cols=205 Identities=23% Similarity=0.314 Sum_probs=161.5
Q ss_pred CCccEEEEecCCcccccH-HHHHHHHHHHHHHcCCCCChhhh-hhhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTD-GMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~-~~~~~a~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 83 (383)
..+|+|||||||||+|+. ..+..+|.++++++|..++.... ....|.+..+.+..++.. .... ....+...+...+
T Consensus 22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~~-~~~~~~~~~l~~~~~~~~ 100 (260)
T PLN03243 22 CGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLCW-SRDFLQMKRLAIRKEDLY 100 (260)
T ss_pred CCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhcc-CCCHHHHHHHHHHHHHHH
Confidence 368999999999999995 56778999999999988765544 567788887776665431 1111 1122333333333
Q ss_pred Hhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 84 SDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 84 ~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
.... ....++||+.++|+.|+++|++++++||+....+...+ +++|+..+|+.+++++++..+||+|++|..+++++|
T Consensus 101 ~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~ 179 (260)
T PLN03243 101 EYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAI-EAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLG 179 (260)
T ss_pred HHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHH-HHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhC
Confidence 2222 34678999999999999999999999999999999888 889999999999999999999999999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
++|++|++|||+..|+++|+++|+.++++.. .........++.+++++.++
T Consensus 180 ~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g-~~~~~~l~~ad~vi~~~~el 230 (260)
T PLN03243 180 FIPERCIVFGNSNSSVEAAHDGCMKCVAVAG-KHPVYELSAGDLVVRRLDDL 230 (260)
T ss_pred CChHHeEEEcCCHHHHHHHHHcCCEEEEEec-CCchhhhccCCEEeCCHHHH
Confidence 9999999999999999999999999999974 32222223456677776664
No 14
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.96 E-value=2.9e-28 Score=218.59 Aligned_cols=205 Identities=24% Similarity=0.379 Sum_probs=169.6
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhh-hcCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHhh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLPCA-KHEFVNEVYSMFSDH 86 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 86 (383)
+|+|+|||||||+|+.+.+..++.++++++|.+.+...... ..|.+..+.+..++...+.+.. .+++...+.+.+...
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAEA 80 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999998877666655 7788888888777766554321 233444555555544
Q ss_pred hc--cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc--ccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 87 LC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 87 ~~--~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~--~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
+. ...++||+.++|+.|+++|++++++||+....+...+ +.+|+. .+|+.++++++...+||+|+++..+++++|
T Consensus 81 ~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l-~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~ 159 (220)
T TIGR03351 81 YDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLL-EKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTG 159 (220)
T ss_pred hcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-HHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcC
Confidence 42 4689999999999999999999999999999999988 788998 999999999999999999999999999999
Q ss_pred CC-CCcEEEEecChhhhHHHHhcCCEE-EEecCCCCcccc--ccccchhhcccccc
Q 016755 163 ME-PSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR--YTAADEVINSLLDL 214 (383)
Q Consensus 163 ~~-p~e~l~VGDs~~Di~~a~~aG~~~-i~v~~~~~~~~~--~~~a~~vi~~l~e~ 214 (383)
+. |++|++|||+++|+++|+++|+.+ +++.++...... ...++.+++++.++
T Consensus 160 ~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l 215 (220)
T TIGR03351 160 VQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADL 215 (220)
T ss_pred CCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence 97 799999999999999999999999 888776433221 34567788887764
No 15
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=3.4e-28 Score=219.34 Aligned_cols=206 Identities=22% Similarity=0.358 Sum_probs=165.0
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
.|+|+|+|||||||+|+...+..+++.+++++|.+ .+.+......|.+....+........ ....+++...+...+..
T Consensus 10 ~~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 88 (229)
T PRK13226 10 RFPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPELD-AAARDALIPEFLQRYEA 88 (229)
T ss_pred ccCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhccCC-hHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999975 55556666666665554443322111 11123444555555554
Q ss_pred hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 86 ~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
.. ....++||+.++|+.|+++|++++++||+....+...+ +.+++..+|+.++++++...+||+|+++..+++++|++
T Consensus 89 ~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~ 167 (229)
T PRK13226 89 LIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLIL-PQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVA 167 (229)
T ss_pred hhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCC
Confidence 43 34789999999999999999999999999998888777 88899999999999998889999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccc---cccccchhhcccccc
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH---RYTAADEVINSLLDL 214 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~---~~~~a~~vi~~l~e~ 214 (383)
|++|++|||+.+|+.+|+++|+.++++.++..... ....++.+++++.++
T Consensus 168 p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el 220 (229)
T PRK13226 168 PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLL 220 (229)
T ss_pred hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence 99999999999999999999999999988753221 123578888888874
No 16
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.96 E-value=5.4e-28 Score=228.60 Aligned_cols=206 Identities=25% Similarity=0.293 Sum_probs=169.2
Q ss_pred CccEEEEecCCcccccHH-HHHHHHHHHHHHcCCCCChhh-hhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 8 LMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
..++|||||||||+|+.. .+..+|.++++++|.+.+... .....|.+..+.+..++.....+...+++...+.+.+.+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~ 209 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIYQA 209 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Confidence 679999999999999976 566799999999998876653 467888888888777654322111223344445555544
Q ss_pred hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 86 ~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
.. ....++||+.++|+.|+++|++++|+||++...++..+ +.+|+..+|+.+++++++..+||+|++|..+++++|++
T Consensus 210 ~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L-~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~ 288 (381)
T PLN02575 210 LQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAI-GSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFI 288 (381)
T ss_pred HhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCC
Confidence 44 34689999999999999999999999999999999999 88999999999999999999999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
|++|++|||+..|+++|+++|+.+|++..+... .....++.+++++.++.
T Consensus 289 Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~-~~l~~Ad~iI~s~~EL~ 338 (381)
T PLN02575 289 PERCIVFGNSNQTVEAAHDARMKCVAVASKHPI-YELGAADLVVRRLDELS 338 (381)
T ss_pred cccEEEEcCCHHHHHHHHHcCCEEEEECCCCCh-hHhcCCCEEECCHHHHH
Confidence 999999999999999999999999999875322 22335678889998863
No 17
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.96 E-value=8.7e-28 Score=214.31 Aligned_cols=202 Identities=22% Similarity=0.300 Sum_probs=166.5
Q ss_pred EEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHH---HHHHHHHHHHHhhh
Q 016755 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKH---EFVNEVYSMFSDHL 87 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 87 (383)
||||+||||+|+...+..++..+++++|.+ .+...+....|.+..+.+..++...+...+.. ++...+.+.+....
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEVA 80 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHHhc
Confidence 689999999999998999999999999986 56666677778777777777766665544432 33334444444433
Q ss_pred c-cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCC
Q 016755 88 C-KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (383)
Q Consensus 88 ~-~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~ 166 (383)
. ...++||+.++|+.|+++|++++++|++....++..+ +++|+..+|+.++++++...+||+|+.+..+++++|++|+
T Consensus 81 ~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~ 159 (213)
T TIGR01449 81 GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLL-ELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQ 159 (213)
T ss_pred cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChh
Confidence 2 4689999999999999999999999999999999888 8899999999999999999999999999999999999999
Q ss_pred cEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhcccccc
Q 016755 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL 214 (383)
Q Consensus 167 e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~ 214 (383)
+|++|||+.+|+.+|+++|+.++++.++...... ...++.+++++.++
T Consensus 160 ~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l 209 (213)
T TIGR01449 160 QMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNEL 209 (213)
T ss_pred HeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHH
Confidence 9999999999999999999999999886543222 23567888888774
No 18
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.96 E-value=1.4e-27 Score=208.76 Aligned_cols=186 Identities=28% Similarity=0.448 Sum_probs=159.1
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 016755 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (383)
Q Consensus 5 ~~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (383)
|+.++++|+||+||||+|+...+..++.++++++|.+.+........|....+.+..++...+...+.+++...+...+.
T Consensus 1 ~~~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (188)
T PRK10725 1 MYDRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVK 80 (188)
T ss_pred CCCcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999887777777788888877777777766665555555554444444
Q ss_pred hhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 85 ~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
... ....++|+ .++|..|++. ++++++||++...+...+ +.+|+..+|+.+++++++...||+|++|..+++++|+
T Consensus 81 ~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~ 157 (188)
T PRK10725 81 SMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALL-AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGV 157 (188)
T ss_pred HHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHH-HhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCC
Confidence 433 45678886 5899999875 899999999999999888 8899999999999999999999999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+|++|++|||+.+|+++|+++|+++|.+..
T Consensus 158 ~~~~~l~igDs~~di~aA~~aG~~~i~~~~ 187 (188)
T PRK10725 158 QPTQCVVFEDADFGIQAARAAGMDAVDVRL 187 (188)
T ss_pred CHHHeEEEeccHhhHHHHHHCCCEEEeecC
Confidence 999999999999999999999999998853
No 19
>PRK11587 putative phosphatase; Provisional
Probab=99.96 E-value=1e-27 Score=214.71 Aligned_cols=202 Identities=27% Similarity=0.401 Sum_probs=157.3
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH--HH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM--FS 84 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 84 (383)
|++|+|+|||||||+|+.+.+..+++++++++|.+. .+......|.+....+..+... .+.+++...+... +.
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 75 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP-DEVLNFIHGKQAITSLRHFMAG----ASEAEIQAEFTRLEQIE 75 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH-HHHHHHHcCCCHHHHHHHHhcc----CCcHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999864 2333444576666665554321 2233333333321 11
Q ss_pred h-hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 85 D-HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 85 ~-~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
. ......++||+.++|+.|+++|++++++||+........+ +..++ .+|+.+++++++...||+|+.+..+++++|+
T Consensus 76 ~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l-~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~ 153 (218)
T PRK11587 76 ATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARH-KAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGL 153 (218)
T ss_pred HhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHH-HhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCC
Confidence 1 2346789999999999999999999999999888776666 66777 4578888888888899999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCc
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~ 216 (383)
+|++|++|||+..|+++|+++|+.++++.++.... ....++.+++++.++..
T Consensus 154 ~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~-~~~~~~~~~~~~~el~~ 205 (218)
T PRK11587 154 APQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTP-RLDEVDLVLHSLEQLTV 205 (218)
T ss_pred CcccEEEEecchhhhHHHHHCCCEEEEECCCCchh-hhccCCEEecchhheeE
Confidence 99999999999999999999999999998754322 23356788888888643
No 20
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.96 E-value=1.5e-27 Score=218.62 Aligned_cols=188 Identities=17% Similarity=0.242 Sum_probs=150.5
Q ss_pred CccEEEEecCCcccccHH-HHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHH----------HHHHhCCCCCHHH--
Q 016755 8 LMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI----------IVEDYGLPCAKHE-- 74 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~-- 74 (383)
++++|+|||||||+|+.. .+..++.++++++|.+++.+......|.+....+.. +...++.+.+...
T Consensus 1 ~~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
T TIGR01422 1 KIEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEADIE 80 (253)
T ss_pred CceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHHHH
Confidence 378999999999999854 346789999999998877776666677665443332 3344444333322
Q ss_pred -HHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC-cEEEeCCCCCCCCCCh
Q 016755 75 -FVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSP 151 (383)
Q Consensus 75 -~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f-~~i~~~~~~~~~kp~p 151 (383)
+...+...+.... ....++||+.++|+.|+++|++++|+||++...++..+ +.+|+..+| +.+++++++..+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l-~~~gl~~~f~d~ii~~~~~~~~KP~p 159 (253)
T TIGR01422 81 AIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVA-PEAALQGYRPDYNVTTDDVPAGRPAP 159 (253)
T ss_pred HHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHH-HHHHhcCCCCceEEccccCCCCCCCH
Confidence 2233333332222 45789999999999999999999999999999999888 788998885 8999999999999999
Q ss_pred HHHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 152 DIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 152 ~~~~~~~~~lg~~-p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
++|..+++++|+. |++|++|||+++|+.+|+++|+.+|+|.++..
T Consensus 160 ~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 160 WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSN 205 (253)
T ss_pred HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence 9999999999995 99999999999999999999999999988754
No 21
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.95 E-value=3.5e-27 Score=211.75 Aligned_cols=205 Identities=23% Similarity=0.371 Sum_probs=167.1
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhh-hhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
+++++|+||+||||+|+...+..++.++++++|.+.+.+. .....+.+..+.+..++..++.+.+.+++...+...+..
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEVAR 81 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 3589999999999999999989999999999998776543 456667778888888888888776666666655554443
Q ss_pred hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCc-EEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 86 ~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~-~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
.. ....++||+.++|+.| +++++++||++...+...+ +.+++..+|+ .++++++.+..||+|++|..+++++|+
T Consensus 82 ~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l-~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~ 157 (221)
T PRK10563 82 LFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSL-GKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNV 157 (221)
T ss_pred HHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHH-HhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCC
Confidence 33 4578999999999999 3899999999999898888 8899999996 678888888999999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
+|++|++|||++.|+++|+++|+.++++..+.........++.+++++.++.
T Consensus 158 ~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (221)
T PRK10563 158 NVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLP 209 (221)
T ss_pred CHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999988653322222223455677777743
No 22
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.95 E-value=3.1e-27 Score=218.07 Aligned_cols=209 Identities=19% Similarity=0.263 Sum_probs=160.8
Q ss_pred cCCccEEEEecCCcccccHH-HHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHH----------HHHhCCCCCHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAII----------VEDYGLPCAKHE 74 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~ 74 (383)
|+++|+||||+||||+|+.. .+..++.++++++|.+++.+......|.+..+.+..+ ...++.+.+...
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 80 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEAD 80 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHH
Confidence 34689999999999999854 3367899999999988776666666776654433332 233444333222
Q ss_pred ---HHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC-cEEEeCCCCCCCCC
Q 016755 75 ---FVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKP 149 (383)
Q Consensus 75 ---~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f-~~i~~~~~~~~~kp 149 (383)
+...+...+.... ....++||+.++|+.|+++|++++|+||++...+...+ +.+++..+| +.+++++++..+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l-~~~~l~~~~~d~i~~~~~~~~~KP 159 (267)
T PRK13478 81 VDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVV-PLAAAQGYRPDHVVTTDDVPAGRP 159 (267)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHHhhcCCCceEEEcCCcCCCCCC
Confidence 2233333333322 45789999999999999999999999999999888888 777777764 89999999999999
Q ss_pred ChHHHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcCCEEEEecCCCCc------------------------ccc-ccc
Q 016755 150 SPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THR-YTA 203 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~-p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~------------------------~~~-~~~ 203 (383)
+|++|..+++++|+. |++|++|||+++|+++|+++|+.+|+|.++... ... ...
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 239 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAG 239 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcC
Confidence 999999999999996 699999999999999999999999999987542 111 345
Q ss_pred cchhhccccccC
Q 016755 204 ADEVINSLLDLR 215 (383)
Q Consensus 204 a~~vi~~l~e~~ 215 (383)
++.+++++.++.
T Consensus 240 a~~vi~~~~~l~ 251 (267)
T PRK13478 240 AHYVIDTIADLP 251 (267)
T ss_pred CCeehhhHHHHH
Confidence 678888887754
No 23
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.95 E-value=4.3e-27 Score=211.09 Aligned_cols=205 Identities=20% Similarity=0.311 Sum_probs=147.9
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHH---HHHcCCCCChhhhhhhcC-------CCHHHHHHHHHHHhCCCCCHHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKEWDGREKHKIVG-------KTPLEEAAIIVEDYGLPCAKHEFVN 77 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~---~~~~g~~~~~~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (383)
|+++|+||+||||+|+...+..++..+ +..+|.+++.+....... ..........+..............
T Consensus 1 ~~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T TIGR02253 1 MIKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVAA 80 (221)
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHHH
Confidence 378999999999999987777766654 445666665444322111 1000011111222221111222222
Q ss_pred HHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHH
Q 016755 78 EVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (383)
Q Consensus 78 ~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~ 157 (383)
..............++||+.++|+.|+++|++++++||+....+...+ +.+|+..+|+.++++++.+..||+|++|..+
T Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~ 159 (221)
T TIGR02253 81 FVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKL-ERLGVRDFFDAVITSEEEGVEKPHPKIFYAA 159 (221)
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-HhCChHHhccEEEEeccCCCCCCCHHHHHHH
Confidence 222222223345789999999999999999999999999988888888 8899999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCcc---ccccccchhhccccc
Q 016755 158 AKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT---HRYTAADEVINSLLD 213 (383)
Q Consensus 158 ~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~---~~~~~a~~vi~~l~e 213 (383)
++++|++|++|++|||++ +|+.+|+++|+.++++.++.... .....++.+++++.+
T Consensus 160 ~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~e 219 (221)
T TIGR02253 160 LKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLRE 219 (221)
T ss_pred HHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHh
Confidence 999999999999999998 89999999999999998864422 112345677777765
No 24
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=1.9e-26 Score=212.78 Aligned_cols=208 Identities=25% Similarity=0.303 Sum_probs=165.7
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC-hhhhhhhcCCCHHHHHHHHHHH----hCCCC-CHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVED----YGLPC-AKHEFVNEVY 80 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~ 80 (383)
.++|+|+|||||||+|+.+.+..++..+++++|.+.. .+......+.+..+....++.. .+.+. ..+++...+.
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFM 90 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998754 3445566777766655554322 12221 1223333344
Q ss_pred HHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHH
Q 016755 81 SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 81 ~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~ 160 (383)
+.+........++||+.++|+.|+++|++++++||++...+...+ +.+++..+|+.++++++...+||+|++++.++++
T Consensus 91 ~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l-~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~ 169 (272)
T PRK13223 91 EAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLL-DQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKM 169 (272)
T ss_pred HHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHH-HHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHH
Confidence 444433334678999999999999999999999999999888888 7789999999999999998899999999999999
Q ss_pred cCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccC
Q 016755 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR 215 (383)
Q Consensus 161 lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~ 215 (383)
+|++|++|++|||+.+|+++|+++|+.+++|.++...... ...++.+++++.++.
T Consensus 170 ~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~ 226 (272)
T PRK13223 170 AGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALL 226 (272)
T ss_pred hCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHH
Confidence 9999999999999999999999999999999886433222 236788898888863
No 25
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.95 E-value=3.1e-26 Score=199.73 Aligned_cols=179 Identities=30% Similarity=0.449 Sum_probs=151.0
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHH---HHHHHHHHHHhhh
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSMFSDHL 87 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 87 (383)
+|+||+||||+|+...+..++.++++.+|.+.+........+.+..+.+..++...+.+.+... +...+.+.+....
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYYVELL 80 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999998877767777888888888888887776554433 2333333343332
Q ss_pred ---ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 88 ---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 88 ---~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
....++||+.++|+.|+++|++++++||+.. ....+ +.+|+..+|+.++++++....||+|+.|..++++++++
T Consensus 81 ~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~ 157 (185)
T TIGR01990 81 KELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVL-EKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVS 157 (185)
T ss_pred HhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHH-HhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCC
Confidence 2357899999999999999999999998753 34456 78899999999999999999999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
|++|++|||+++|+++|+++|+++++|.
T Consensus 158 ~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 158 PSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred HHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 9999999999999999999999999874
No 26
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.95 E-value=4.9e-26 Score=198.42 Aligned_cols=180 Identities=30% Similarity=0.497 Sum_probs=151.4
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHH---HHHHHHHHHHh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSMFSD 85 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 85 (383)
+++|+||+||||+|+...+..++..+++++|.+++........|.+..+.+..++...+...+..+ +...+.+.+.+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNELYRE 80 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999988765555566777888888888777644444333 33334444544
Q ss_pred hh--ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 86 HL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 86 ~~--~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
.. ....++||+.++|+.|+++|++++++|++ ..+...+ +.+|+..+|+.++++++.+..||+|+++..+++++|+
T Consensus 81 ~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l-~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~ 157 (185)
T TIGR02009 81 LLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRIL-AKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGV 157 (185)
T ss_pred HHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHH-HHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCC
Confidence 43 34789999999999999999999999998 5567777 7899999999999999999999999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
+|++|++|||+.+|+++|+++|++++.|
T Consensus 158 ~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 158 SPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred CHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 9999999999999999999999998875
No 27
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=1.1e-25 Score=202.64 Aligned_cols=208 Identities=22% Similarity=0.312 Sum_probs=168.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHH---HHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKH---EFVNEVYSM 82 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 82 (383)
+++++|+||+||||+|+...+..++..+++++|.+ .+...+....+.+..+.+...+...+...+.. +....+...
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGREPDEELLEKLRELFDRH 83 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhccCCccHHHHHHHHHHHHHH
Confidence 56899999999999999888889999999999876 35555667777777777766665544333332 233334444
Q ss_pred HHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHc
Q 016755 83 FSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 83 ~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~l 161 (383)
+.... ....++||+.++++.|+++|++++++|++....+...+ +.+++..+|+.+++++++...||+|+++..+++++
T Consensus 84 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 162 (226)
T PRK13222 84 YAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLL-EALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKL 162 (226)
T ss_pred HHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHc
Confidence 44433 24789999999999999999999999999999888888 78899999999999999989999999999999999
Q ss_pred CCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccc--cccccchhhccccccC
Q 016755 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDLR 215 (383)
Q Consensus 162 g~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~--~~~~a~~vi~~l~e~~ 215 (383)
+++|++|++|||+.+|+++|+++|+.++++.++..... ....++++++++.++.
T Consensus 163 ~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~ 218 (226)
T PRK13222 163 GLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELL 218 (226)
T ss_pred CCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHH
Confidence 99999999999999999999999999999998654222 2345678888888753
No 28
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.94 E-value=4.2e-26 Score=202.33 Aligned_cols=195 Identities=25% Similarity=0.334 Sum_probs=156.0
Q ss_pred EEEecCCcccccHHHHHHHHHHHHHHc-CCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcc
Q 016755 12 VILDLDGTLLNTDGMFSEVLKTFLVKY-GKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK 89 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~~~~~~~~-g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (383)
|+|||||||+|+...+..+++++++++ |.+ .+.+......|....+.+. ..+.+.. ....+..........
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~ 73 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIMR----IMGLPLE---MEEPFVRESYRLAGE 73 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHHHH----HcCCCHH---HHHHHHHHHHHhhcc
Confidence 689999999999999999999999874 653 4555666667766554433 3343321 111111112222356
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
.+++||+.++|+.|+++|++++++||+....+...+ +.+|+..+|+.++++++...+||+|+.++.+++++|++|++|+
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLL-EALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV 152 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence 789999999999999999999999999999988888 8899999999999999998999999999999999999999999
Q ss_pred EEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhcccccc
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL 214 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~ 214 (383)
+|||+.+|+.+|+++|++++.+.++...... ...++.+++++.++
T Consensus 153 ~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l 199 (205)
T TIGR01454 153 MVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSL 199 (205)
T ss_pred EEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHH
Confidence 9999999999999999999999987644332 33567788888764
No 29
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=5.9e-26 Score=208.88 Aligned_cols=201 Identities=19% Similarity=0.302 Sum_probs=161.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFS 84 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 84 (383)
+++++|+|||||||+|+.+.+..+++++++++|.. ++.+......+......+. .++.+ ....++...+.+.+.
T Consensus 60 ~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~i~~----~~~~~~~~~~~~~~~~~~~~~ 135 (273)
T PRK13225 60 QTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVR----RAGLSPWQQARLLQRVQRQLG 135 (273)
T ss_pred hhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHH----HcCCCHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999986 5555566666665544433 33433 123344455555555
Q ss_pred hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 85 ~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
......+++||+.++|+.|+++|++++++||+....+...+ +.+|+..+|+.++++++. +++++.+..++++++++
T Consensus 136 ~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L-~~~gl~~~F~~vi~~~~~---~~k~~~~~~~l~~~~~~ 211 (273)
T PRK13225 136 DCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFL-QRQGLRSLFSVVQAGTPI---LSKRRALSQLVAREGWQ 211 (273)
T ss_pred hhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCChhheEEEEecCCC---CCCHHHHHHHHHHhCcC
Confidence 55566789999999999999999999999999999999998 889999999998887764 35678999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccC
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR 215 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~ 215 (383)
|++|++|||+.+|+.+|+++|+.++++.++...... ...++++++++.++.
T Consensus 212 p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~ 264 (273)
T PRK13225 212 PAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLL 264 (273)
T ss_pred hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHH
Confidence 999999999999999999999999999987544322 345788999988864
No 30
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.94 E-value=1.5e-25 Score=196.76 Aligned_cols=213 Identities=38% Similarity=0.581 Sum_probs=188.0
Q ss_pred ccccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 016755 3 QPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (383)
Q Consensus 3 ~~~~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (383)
..+...+.+++||+||||+|++..+..+++..+.++|..+++.......|....+..+.++.....+.+.+++..+..+.
T Consensus 4 ~~~~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~ 83 (222)
T KOG2914|consen 4 KSLSLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEI 83 (222)
T ss_pred cccccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 33456688999999999999999999999999999999999999999999999999999998888899999999999999
Q ss_pred HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEe--CCCCCCCCCChHHHHHHHHH
Q 016755 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG--SDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 83 ~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~--~~~~~~~kp~p~~~~~~~~~ 160 (383)
....+....+.||+.++++.|+.+|++++++|++++...+..+..+-++...|+.++. +.++..+||+|++|..++++
T Consensus 84 ~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~ 163 (222)
T KOG2914|consen 84 LDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKR 163 (222)
T ss_pred HHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHh
Confidence 9998999999999999999999999999999999999888888444447788888888 77888999999999999999
Q ss_pred cCCCC-CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 161 LNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 161 lg~~p-~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
+|..| +.|++++|++..+++|+++||.+++++...........++.+++++.+..
T Consensus 164 l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~~ 219 (222)
T KOG2914|consen 164 LGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDFK 219 (222)
T ss_pred cCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccccC
Confidence 99999 99999999999999999999999999984333333445567777776643
No 31
>PLN02811 hydrolase
Probab=99.94 E-value=3.8e-25 Score=198.27 Aligned_cols=202 Identities=40% Similarity=0.671 Sum_probs=164.8
Q ss_pred cCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHhhhccCCCC
Q 016755 16 LDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFVNEVYSMFSDHLCKVKAL 93 (383)
Q Consensus 16 lDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 93 (383)
|||||+|+...+..+|..+++++|...+.+......|.+..+.+..++...+.+. ..+.+.......+........++
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTSDLM 80 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhhCCCC
Confidence 7999999999999999999999999877666777888888888888877766652 34444444444444444567889
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC--CCCCCCCChHHHHHHHHHcC---CCCCcE
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLN---MEPSSS 168 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~--~~~~~kp~p~~~~~~~~~lg---~~p~e~ 168 (383)
||+.++|+.|+++|++++++||+....+...+.+..++..+|+.+++++ ++..+||+|++|..++++++ ++|++|
T Consensus 81 ~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~ 160 (220)
T PLN02811 81 PGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKV 160 (220)
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccce
Confidence 9999999999999999999999987655544434557888999999999 88889999999999999997 999999
Q ss_pred EEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCcc
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~ 217 (383)
++|||+..|+++|+++|++++++.++.........++.+++++.++...
T Consensus 161 v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~~ 209 (220)
T PLN02811 161 LVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKPE 209 (220)
T ss_pred EEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCHH
Confidence 9999999999999999999999987653333334678899999886543
No 32
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.94 E-value=3e-25 Score=199.43 Aligned_cols=200 Identities=21% Similarity=0.264 Sum_probs=151.9
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcC------------C-CHH----HHHHHHHHHhCCCCC
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG------------K-TPL----EEAAIIVEDYGLPCA 71 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g------------~-~~~----~~~~~~~~~~~~~~~ 71 (383)
+|+|+||+||||+|+...+..++.++++++|.+.+......+.+ . ... ..+..++...+.+..
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYNTEAD 80 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCc
Confidence 58999999999999999888899999999887765433221111 1 111 112223344443322
Q ss_pred HHHHHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCC
Q 016755 72 KHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150 (383)
Q Consensus 72 ~~~~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~ 150 (383)
.+.+.. .+.... ...+++||+.++|+.|++. ++++++||+....+...+ +.+++..+|+.++++++.+..||+
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~ 154 (224)
T TIGR02254 81 EALLNQ----KYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRL-RKSGLFPFFDDIFVSEDAGIQKPD 154 (224)
T ss_pred HHHHHH----HHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHH-HHCCcHhhcCEEEEcCccCCCCCC
Confidence 222222 222222 2468999999999999999 999999999999888888 889999999999999999999999
Q ss_pred hHHHHHHHHHc-CCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 151 PDIFLEAAKRL-NMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 151 p~~~~~~~~~l-g~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
|+++..+++++ |++|++|++|||+. +|+.+|+++|+.++++.++.........++.+++++.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHH
Confidence 99999999999 99999999999998 799999999999999987543322223456778887764
No 33
>PRK09449 dUMP phosphatase; Provisional
Probab=99.93 E-value=4.3e-25 Score=198.57 Aligned_cols=197 Identities=22% Similarity=0.340 Sum_probs=143.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhh--cCC-----------CHHHH----HHHHHHHhCCCC
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI--VGK-----------TPLEE----AAIIVEDYGLPC 70 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~--~g~-----------~~~~~----~~~~~~~~~~~~ 70 (383)
++|+|+|||||||+|.. ...+++++++.+|...+.+....+ .+. ...+. +..+...++.+
T Consensus 2 ~~k~iiFDlDGTLid~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (224)
T PRK09449 2 KYDWILFDADETLFHFD--AFAGLQRMFSRYGVDFTAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNVT- 78 (224)
T ss_pred CccEEEEcCCCchhcch--hhHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCC-
Confidence 68999999999999854 356778888888887655443332 111 11110 01122222221
Q ss_pred CHHHHHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCC
Q 016755 71 AKHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP 149 (383)
Q Consensus 71 ~~~~~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp 149 (383)
..++.. .+...+ ....++||+.++|+.|+ +|++++++||+....+...+ +.+|+..+|+.++++++.+..||
T Consensus 79 -~~~~~~----~~~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP 151 (224)
T PRK09449 79 -PGELNS----AFLNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRL-ERTGLRDYFDLLVISEQVGVAKP 151 (224)
T ss_pred -HHHHHH----HHHHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHH-HhCChHHHcCEEEEECccCCCCC
Confidence 222222 222222 24679999999999999 57999999999999888888 88999999999999999999999
Q ss_pred ChHHHHHHHHHcCCC-CCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 150 SPDIFLEAAKRLNME-PSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~-p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
+|++|..+++++|+. +++|++|||+. +|+.+|+++|+.++++.++.........++.+++++.++
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el 218 (224)
T PRK09449 152 DVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSEL 218 (224)
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHH
Confidence 999999999999985 48999999998 699999999999999986432211112457788887764
No 34
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.93 E-value=1.1e-24 Score=202.20 Aligned_cols=208 Identities=26% Similarity=0.406 Sum_probs=153.2
Q ss_pred CCccEEEEecCCcccccH-HHHHHHHHHHHHHcCC-CC--Chhhhhh--hcCCCHHHHHHHHHHHhCCC--------CCH
Q 016755 7 KLMSCVILDLDGTLLNTD-GMFSEVLKTFLVKYGK-EW--DGREKHK--IVGKTPLEEAAIIVEDYGLP--------CAK 72 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~-~~~~~a~~~~~~~~g~-~~--~~~~~~~--~~g~~~~~~~~~~~~~~~~~--------~~~ 72 (383)
..+++|||||||||+|+. ..+..++..+++++|. +. +.+.... ..+.+.......+ ...+.+ .+.
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 116 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYF-NENGWPTSTIEKAPKDE 116 (286)
T ss_pred cCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHH-HHcCCCccccccCCccc
Confidence 468999999999999999 9999999999999998 33 3332221 1454544433332 222221 111
Q ss_pred ---HHHHH----HHHHHHHhhhc--cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcC---CcccCcEEEe
Q 016755 73 ---HEFVN----EVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG---WNESFSVIVG 140 (383)
Q Consensus 73 ---~~~~~----~~~~~~~~~~~--~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~g---l~~~f~~i~~ 140 (383)
++... .....+...+. .+.++||+.++|+.|+++|++++++||+....+...+ +..+ +..+|+.+ +
T Consensus 117 e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l-~~~~~~~~~~~~~~v-~ 194 (286)
T PLN02779 117 EERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIV-NTLLGPERAQGLDVF-A 194 (286)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhccccccCceEEE-e
Confidence 11222 22233444332 3589999999999999999999999999999888777 4443 23334444 7
Q ss_pred CCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCcc
Q 016755 141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (383)
Q Consensus 141 ~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~ 217 (383)
++++..+||+|++|..+++++|++|++|++|||+.+|+++|+++|+.++.+.++.........++.+++++.++...
T Consensus 195 ~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~ 271 (286)
T PLN02779 195 GDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLE 271 (286)
T ss_pred ccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchh
Confidence 88888899999999999999999999999999999999999999999999988755444444678889999886544
No 35
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.93 E-value=4.2e-25 Score=194.80 Aligned_cols=180 Identities=18% Similarity=0.320 Sum_probs=136.3
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhh---------hhhhcCC--C----HHHHHHHHHHHhCCCCCHH
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE---------KHKIVGK--T----PLEEAAIIVEDYGLPCAKH 73 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~---------~~~~~g~--~----~~~~~~~~~~~~~~~~~~~ 73 (383)
+|+|+||+||||+|+... ..++.+++...+....... .....|. . ..+.+..++..++.+....
T Consensus 1 ik~viFD~dgTLiD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 79 (198)
T TIGR01428 1 IKALVFDVYGTLFDVHSV-VERFAELYGGRGEALSQLWRQKQLEYSWLRTLMGPYADFWDLTREALRYLLGRLGLEDDES 79 (198)
T ss_pred CcEEEEeCCCcCccHHHH-HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHccCCCcCHHHHHHHHHHHHHHHcCCCCCHH
Confidence 578999999999999864 3444444332221111000 0011111 1 1244555666667654332
Q ss_pred HHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHH
Q 016755 74 EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153 (383)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~ 153 (383)
. .. .+.+.+....++||+.++|+.|+++|++++++||++...+...+ +.+|+..+|+.++++++++..||+|++
T Consensus 80 ~-~~----~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~KP~~~~ 153 (198)
T TIGR01428 80 A-AD----RLAEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLV-KHAGLDDPFDAVLSADAVRAYKPAPQV 153 (198)
T ss_pred H-HH----HHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHCCChhhhheeEehhhcCCCCCCHHH
Confidence 2 22 23333446789999999999999999999999999999998888 788999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
|..+++++|++|++|++|||+++|+.+|+++|+.++++++..
T Consensus 154 ~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 154 YQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred HHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 999999999999999999999999999999999999998843
No 36
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.93 E-value=5.6e-25 Score=217.81 Aligned_cols=204 Identities=16% Similarity=0.215 Sum_probs=161.8
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcC------CCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG------KEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (383)
.+|+++|||||||||+|+.+.+..+|.+++++++ ...+.+.+....|.+..+.+..++...+.. ..++....+
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~~~~-~~~~~~~~~ 316 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDHSLE-IREQTDAYF 316 (459)
T ss_pred HHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhcchh-HHHHHHHHH
Confidence 3568999999999999999999999999998874 222445667788888888777766544322 112233334
Q ss_pred HHHHHhhh--ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHH
Q 016755 80 YSMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (383)
Q Consensus 80 ~~~~~~~~--~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~ 157 (383)
.+.+.... ...+++||+.++|+.|+++|++++++||+....+...+ +++++..+|+.+++++++. .||+|+.+..+
T Consensus 317 ~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l-~~~~l~~~f~~i~~~d~v~-~~~kP~~~~~a 394 (459)
T PRK06698 317 LERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIV-SYYDLDQWVTETFSIEQIN-SLNKSDLVKSI 394 (459)
T ss_pred HHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHCCcHhhcceeEecCCCC-CCCCcHHHHHH
Confidence 44443332 35689999999999999999999999999999999999 8899999999999998874 47888999999
Q ss_pred HHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 158 ~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
+++++ |++|++|||+++|+.+|+++|+.++++.++.........++++++++.++
T Consensus 395 l~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 395 LNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred HHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHH
Confidence 98864 78999999999999999999999999988654333334568888888775
No 37
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.93 E-value=2.3e-24 Score=190.86 Aligned_cols=178 Identities=28% Similarity=0.352 Sum_probs=137.0
Q ss_pred cEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhh------------------cCCCHHHH----HHHHHHHhC
Q 016755 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VGKTPLEE----AAIIVEDYG 67 (383)
Q Consensus 10 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~------------------~g~~~~~~----~~~~~~~~~ 67 (383)
|+|+||+||||+|+...+..++.++++++|.+.+....... .+....+. +...+...+
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG 80 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 58999999999999888899999999999988765332110 13344332 333333344
Q ss_pred CCCCHHHHHHHHHHHHHhhh--ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC
Q 016755 68 LPCAKHEFVNEVYSMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (383)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~--~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~ 145 (383)
.+ +...+...+.+.+.... ....++||+.++|+.|+++|++++++||+... +...+ +.+|+..+|+.++++++++
T Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l-~~~~l~~~fd~i~~s~~~~ 157 (203)
T TIGR02252 81 VP-DPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLL-EALGLLEYFDFVVTSYEVG 157 (203)
T ss_pred CC-CchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHH-HHCCcHHhcceEEeecccC
Confidence 22 22233333333332221 23578999999999999999999999998765 46666 7889999999999999999
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEE
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVA 190 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~ 190 (383)
.+||+|++|..+++++|++|++|++|||+. +|+.+|+++|+.+++
T Consensus 158 ~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 158 AEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred CCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999999999999999999999999998 899999999999874
No 38
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.92 E-value=4.1e-24 Score=228.54 Aligned_cols=208 Identities=25% Similarity=0.363 Sum_probs=172.8
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (383)
.++++|+|||||||+|+...+..++.++++++|.+++.+......+.+..+.+..+....+.. .+.++....+.+.+.+
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 152 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYLE 152 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999988877777888888877776666655543 3344444444444433
Q ss_pred hh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc-ccCcEEEeCCCCCCCCCChHHHHHHHHHc
Q 016755 86 HL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 86 ~~---~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~-~~f~~i~~~~~~~~~kp~p~~~~~~~~~l 161 (383)
.+ ....++||+.++|+.|+++|++++|+||+....++..+ +.+|+. .+|+.+++++++..+||+|++|..+++++
T Consensus 153 ~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L-~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~l 231 (1057)
T PLN02919 153 KYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANL-AAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKIL 231 (1057)
T ss_pred HhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-HHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHc
Confidence 32 12347999999999999999999999999999998888 788996 78999999999999999999999999999
Q ss_pred CCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc-ccccchhhccccccC
Q 016755 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLR 215 (383)
Q Consensus 162 g~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~-~~~a~~vi~~l~e~~ 215 (383)
|++|++|++|||+..|+++|+++||+++++.++...... ...++.+++++.++.
T Consensus 232 gv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~ 286 (1057)
T PLN02919 232 GVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNIS 286 (1057)
T ss_pred CcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCC
Confidence 999999999999999999999999999999986543222 346678888888764
No 39
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.92 E-value=1e-24 Score=187.49 Aligned_cols=175 Identities=31% Similarity=0.531 Sum_probs=147.2
Q ss_pred EEEecCCcccccHHHHHHHHHH-HHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhccC
Q 016755 12 VILDLDGTLLNTDGMFSEVLKT-FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKV 90 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~~~-~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (383)
|+||+||||+|+...+..++.. +++.++.+.+........+....+.+..++...+.. ...+.+.+.+. ......
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~ 76 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGID--PEEIQELFREY--NLESKL 76 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH--HHHHHHHHHHH--HHHGGE
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchh--HHHHHHHhhhh--hhhhcc
Confidence 7999999999998888888887 577888776666666667777777777777766432 22222222222 123578
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~ 170 (383)
+++||+.++|+.|+++|++++++||++...+...+ +.+|+..+|+.++++++.+..||+|+.|..+++++|++|++|++
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l-~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~ 155 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVL-ERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILF 155 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHH-HHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEE
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccc-cccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEE
Confidence 89999999999999999999999999999999888 88899999999999999999999999999999999999999999
Q ss_pred EecChhhhHHHHhcCCEEEEe
Q 016755 171 IEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 171 VGDs~~Di~~a~~aG~~~i~v 191 (383)
|||+..|+.+|+++|+.+|+|
T Consensus 156 vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 156 VGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EESSHHHHHHHHHTTSEEEEE
T ss_pred EeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999986
No 40
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.92 E-value=3.1e-24 Score=192.59 Aligned_cols=108 Identities=15% Similarity=0.230 Sum_probs=100.1
Q ss_pred ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 88 ~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
....++||+.++|+.|+++|++++++||++...+...+ +.+|+..+|+.++++++++.+||+|++|..+++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKL-EHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHH-HHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 56789999999999999999999999999999888888 78999999999999999999999999999999999999999
Q ss_pred EEEEecChhhhHHHHhcCCEE-EEecCCCC
Q 016755 168 SLVIEDSVIGVVAGKAAGMEV-VAVPSLPK 196 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~-i~v~~~~~ 196 (383)
|++|||++.|+++|+++|+.+ +.|..+..
T Consensus 169 ~l~igDs~~di~aA~~aG~~~~~~v~~~~~ 198 (224)
T PRK14988 169 TLFIDDSEPILDAAAQFGIRYCLGVTNPDS 198 (224)
T ss_pred EEEEcCCHHHHHHHHHcCCeEEEEEeCCCC
Confidence 999999999999999999974 66766543
No 41
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.92 E-value=3.5e-24 Score=194.27 Aligned_cols=201 Identities=16% Similarity=0.203 Sum_probs=143.7
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC------CChhhhhhhcC---C-----------CHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE------WDGREKHKIVG---K-----------TPLEEAAIIVEDY 66 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~------~~~~~~~~~~g---~-----------~~~~~~~~~~~~~ 66 (383)
.++|+|+||+||||+|+...+..+++++++..+.. +.........+ . -....+..++..+
T Consensus 8 ~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 87 (238)
T PRK10748 8 GRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDA 87 (238)
T ss_pred CCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHc
Confidence 46899999999999999998888888877654211 11111111000 0 0112334455666
Q ss_pred CCCCCHH-HHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC
Q 016755 67 GLPCAKH-EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (383)
Q Consensus 67 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~ 145 (383)
+.+.... .........+........++||+.++|+.|++. ++++++||++.. + +..|+..+|+.++++++++
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~-~~~gl~~~fd~i~~~~~~~ 160 (238)
T PRK10748 88 GLSAEEASAGADAAMINFAKWRSRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----P-ELFGLGDYFEFVLRAGPHG 160 (238)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----H-HHCCcHHhhceeEecccCC
Confidence 6543221 112222233333334578999999999999875 999999998765 3 5679999999999999999
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCc----cccccccchhhcccccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQ----THRYTAADEVINSLLDL 214 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~----~~~~~~a~~vi~~l~e~ 214 (383)
..||+|++|..+++++|++|++|++|||++ .|+.+|+++|+.++++...... ......++..+++|.++
T Consensus 161 ~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el 234 (238)
T PRK10748 161 RSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASL 234 (238)
T ss_pred cCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHH
Confidence 999999999999999999999999999995 9999999999999999875322 11112456778887774
No 42
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.91 E-value=3.9e-23 Score=182.09 Aligned_cols=172 Identities=16% Similarity=0.232 Sum_probs=135.0
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcC-CCCChhhhhhhcCCCHH--------HHHHHHHHHhC-----CCCCHHHHH
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYG-KEWDGREKHKIVGKTPL--------EEAAIIVEDYG-----LPCAKHEFV 76 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g-~~~~~~~~~~~~g~~~~--------~~~~~~~~~~~-----~~~~~~~~~ 76 (383)
+|+|||||||+|+.+.+..+++.+++++| ...+.+.+....|.+.. ..+...+.... .....+++.
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAVT 81 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHHHHHHcCCCCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHHH
Confidence 68999999999999999999999999997 56676666666654321 11222222111 123345555
Q ss_pred HHHHHHHHhhh----------ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCC
Q 016755 77 NEVYSMFSDHL----------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT 146 (383)
Q Consensus 77 ~~~~~~~~~~~----------~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~ 146 (383)
..+.+.+.... ....+.+++.++|+.|++.|++++++||++...++..+ +.+|+..+|+.++++++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~ 160 (197)
T TIGR01548 82 AQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFL-TTHGLEILFPVQIWMEDCPP 160 (197)
T ss_pred HHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHH-HHcCchhhCCEEEeecCCCC
Confidence 55555554321 12245566799999999999999999999999999988 88999999999999999877
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc
Q 016755 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~a 184 (383)
||+|+.+..+++++|++|++|++|||+++|+.+|+++
T Consensus 161 -KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 161 -KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred -CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 9999999999999999999999999999999999875
No 43
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.90 E-value=6.5e-23 Score=182.67 Aligned_cols=179 Identities=21% Similarity=0.217 Sum_probs=125.2
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-----
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF----- 83 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 83 (383)
+|+|+|||||||+|+.. ....|...+...|.+ .........+.........+. .+ ..+.+++...+.+.+
T Consensus 2 ik~viFDldGtL~d~~~-~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~--~g-~~~~~~~~~~~~~~~~~~~~ 76 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG-VMRRWETERGLPGLK-DFIVTVNITGPDFNPWARTFE--RG-ELTAEAFDGLFRHEYGLRLG 76 (211)
T ss_pred ceEEEEecCCceecCHH-HHHHHHHHcCCCCCc-cHHHHHHhcCCCCChHHHHHH--cC-CCCHHHHHHHHHHHhccccC
Confidence 67999999999999966 555565554444433 222222333333222211110 11 112222222222211
Q ss_pred ---------Hhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHH--HHHHHHhhcCCcccCcEEEeCCCCCCCCCCh
Q 016755 84 ---------SDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSP 151 (383)
Q Consensus 84 ---------~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~--i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p 151 (383)
.... ....++||+.++|+.|+++|++++++||+.... ....+ ...++..+|+.++++++.+..||+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~-~~~~l~~~fd~v~~s~~~~~~KP~p 155 (211)
T TIGR02247 77 HDVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEAL-LPGDIMALFDAVVESCLEGLRKPDP 155 (211)
T ss_pred CCcCchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHh-hhhhhHhhCCEEEEeeecCCCCCCH
Confidence 1111 246789999999999999999999999987543 22223 3457888999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
++|..+++++|++|++|++|||+..|+.+|+++|+.++++.+
T Consensus 156 ~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 156 RIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 999999999999999999999999999999999999999976
No 44
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.90 E-value=2.5e-22 Score=174.48 Aligned_cols=175 Identities=30% Similarity=0.429 Sum_probs=125.2
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHH------HHHHHH
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNE------VYSMFS 84 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 84 (383)
+|+|||||||+|+.+.+... .. .......+........ .........+...++...+...+... ....+.
T Consensus 1 ~vlFDlDgtLv~~~~~~~~~-~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (183)
T TIGR01509 1 AILFDLDGVLVDTSSAIEKL-VN--REEFPLVPDELGVSAV-GKLELALRRWKEKYGRTMSAEDFYLLYENADIKQLFYD 76 (183)
T ss_pred CeeeccCCceechHHHHHHH-HH--HHhCCCCcHHHHHHHH-HHHHHHhhccccccCCCCCcHHHHHHHhHHHHHHHHHH
Confidence 48999999999998766541 11 2222222222222221 11222222232324444333332221 223333
Q ss_pred hhhcc--CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 85 DHLCK--VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 85 ~~~~~--~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
..... .+++||+.++|+.|+++|++++++||++... ...+ .++|+..+|+.++++++.+.+||+|+.|..+++++|
T Consensus 77 ~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~ 154 (183)
T TIGR01509 77 AILDEEKLKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLV-QELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLG 154 (183)
T ss_pred HHHhccCCccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHH-HhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcC
Confidence 32333 6899999999999999999999999999887 5444 558999999999999999999999999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
++|++|++|||++.|+.+|+++|+.+|+|
T Consensus 155 ~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 155 LKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 99999999999999999999999999875
No 45
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.90 E-value=1.9e-22 Score=178.03 Aligned_cols=176 Identities=15% Similarity=0.153 Sum_probs=132.0
Q ss_pred cEEEEecCCcccccHHHHH-HHHHHHHHHcCCCC---------ChhhhhhhcC-CCHHHHHHHHHHHhCCCCCHHHHHHH
Q 016755 10 SCVILDLDGTLLNTDGMFS-EVLKTFLVKYGKEW---------DGREKHKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNE 78 (383)
Q Consensus 10 k~viFDlDGTL~d~~~~~~-~a~~~~~~~~g~~~---------~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (383)
.+|+||+||||+|.+.... ..+.. ..+.+. .........| ....+....+.+.++.+.+.+.+...
T Consensus 1 ~~viFDldgvL~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (199)
T PRK09456 1 MLYIFDLGNVIVDIDFNRVLGVWSD---LSRVPLATLKKRFTMGEAFHQHERGEISDEAFAEALCHEMALSLSYEQFAHG 77 (199)
T ss_pred CEEEEeCCCccccCcHHHHHHHHHH---hcCCCHHHHHHHHhcCcHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 3799999999999854221 11211 111110 0111122223 45566667777777776655555444
Q ss_pred HHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHH
Q 016755 79 VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (383)
Q Consensus 79 ~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~ 158 (383)
+.+.+ ..++||+.++|+.|+++|++++++||++...+...+....++..+|+.++++++++.+||+|++|+.++
T Consensus 78 ~~~~~------~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~ 151 (199)
T PRK09456 78 WQAVF------VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVL 151 (199)
T ss_pred HHHHH------hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHH
Confidence 43322 358999999999999999999999999988766555334578889999999999999999999999999
Q ss_pred HHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 159 ~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+++|++|++|++|||+..|+.+|+++|+.++++...
T Consensus 152 ~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 152 QAEGFSAADAVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred HHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 999999999999999999999999999999999774
No 46
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.89 E-value=3.2e-22 Score=174.35 Aligned_cols=170 Identities=21% Similarity=0.257 Sum_probs=125.7
Q ss_pred cEEEEecCCcccccHHHHHHHHHHHHH-----HcCCCCChhh-hh----hhcCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Q 016755 10 SCVILDLDGTLLNTDGMFSEVLKTFLV-----KYGKEWDGRE-KH----KIVGKTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (383)
Q Consensus 10 k~viFDlDGTL~d~~~~~~~a~~~~~~-----~~g~~~~~~~-~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (383)
++|+|||||||+|+...+..++++.+. .+|.+..... +. ...|..... ++...+ .+.+.+...+
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~----~~~~~~--~~~~~~~~~~ 74 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAG----LMILHE--IDADEYLRYV 74 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHH----HHHhhC--CCHHHHHHHH
Confidence 479999999999997777777776543 4455432211 11 112222222 122222 2333333322
Q ss_pred HHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCC----CCCChHHHH
Q 016755 80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT----GKPSPDIFL 155 (383)
Q Consensus 80 ~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~----~kp~p~~~~ 155 (383)
.+. ......+++||+.++|+.|+ ++++++||++...+...+ +.+|+..+|+.++++++.+. .||+|++|.
T Consensus 75 ~~~--~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~ 148 (184)
T TIGR01993 75 HGR--LPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRAL-NRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYE 148 (184)
T ss_pred hcc--CCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHH-HHcCcHhhhCeEEEeecccCccCCCCCCHHHHH
Confidence 221 11235678999999999997 479999999999999888 88899999999999998887 599999999
Q ss_pred HHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 156 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 156 ~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
.+++++|++|++|++|||+..|+.+|+++|+.+++|
T Consensus 149 ~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 149 KALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred HHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999999999999999875
No 47
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.88 E-value=1.1e-21 Score=176.75 Aligned_cols=124 Identities=28% Similarity=0.405 Sum_probs=109.0
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
..+++|++.+.|+.++++ ++++++||+........+ ..+|+.++|+.++++++++..||+|++|..+++++|++|++|
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l-~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKL-RQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHH-HHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 478999999999999999 999999999888888888 788999999999999999999999999999999999999999
Q ss_pred EEEecCh-hhhHHHHhcCCEEEEecCCCCcc-ccccccchhhcccccc
Q 016755 169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDL 214 (383)
Q Consensus 169 l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~-~~~~~a~~vi~~l~e~ 214 (383)
++|||+. ||+.+|+++||.++++....... .....++..+.++.++
T Consensus 175 l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l 222 (229)
T COG1011 175 LFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL 222 (229)
T ss_pred EEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHH
Confidence 9999999 78899999999999998854322 1113456677777764
No 48
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.88 E-value=8.1e-22 Score=173.70 Aligned_cols=187 Identities=14% Similarity=0.179 Sum_probs=128.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-h
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-H 86 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 86 (383)
|+|+|+|||||||+|+. .++..+++++|.+. +.+....+.......... ++. +.......+...... .
T Consensus 1 m~k~viFDlDGTLiD~~----~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~ 69 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQ----SGLPYFAQKYNIPT--DHILKMIQDERFRDPGEL---FGC--DQELAKKLIEKYNNSDF 69 (197)
T ss_pred CCcEEEEecCCceEchh----hccHHHHHhcCCCH--HHHHHHHhHhhhcCHHHH---hcc--cHHHHHHHhhhhhHHHH
Confidence 47899999999999954 45667777887643 343444443322222222 221 222222222222212 2
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc----cCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE----SFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~----~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
.....++||+.++|+.|++. ++++++||.+.......+ ..+++.. +|+.++++++ .||+|+.+..+++++|
T Consensus 70 ~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~-~~~~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~~~ 144 (197)
T PHA02597 70 IRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLN-RQFNLNALFPGAFSEVLMCGH---DESKEKLFIKAKEKYG 144 (197)
T ss_pred HHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHH-hhCCHHHhCCCcccEEEEecc---CcccHHHHHHHHHHhC
Confidence 24577999999999999987 578888887766544444 5566654 5577777776 3678999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhc--CCEEEEecCCCCccccccccchhhcccccc
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~a--G~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
|++|+||||+.+|+.+|+++ |+.+++++++.. .....+++++.++.++
T Consensus 145 --~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~ 194 (197)
T PHA02597 145 --DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDI 194 (197)
T ss_pred --CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHH
Confidence 89999999999999999999 999999988754 2223456888888774
No 49
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.87 E-value=4.2e-21 Score=162.28 Aligned_cols=154 Identities=25% Similarity=0.406 Sum_probs=120.1
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhccC
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKV 90 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (383)
+|+||+||||+|+...+..++++++++++. +.+.+....|...... .... ..+.+ +.......
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~-~~~~-------------~~~~~-~~~~~~~~ 63 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGE--DFQALKALRGLAEELL-YRIA-------------TSFEE-LLGYDAEE 63 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhcc--cHHHHHHHHccChHHH-HHHH-------------HHHHH-HhCcchhh
Confidence 489999999999999999999999998875 2233333333222111 1111 11111 11122345
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~ 170 (383)
..+||+.++|+.|+++|++++++||+....+...+ +.+ +..+|+.++++++.. +||+|+++..+++++|++| +|++
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~ 139 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLL-RKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLH 139 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHH-HHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEE
Confidence 56799999999999999999999999999988888 555 778899999999888 9999999999999999999 9999
Q ss_pred EecChhhhHHHHhcC
Q 016755 171 IEDSVIGVVAGKAAG 185 (383)
Q Consensus 171 VGDs~~Di~~a~~aG 185 (383)
|||+..|+.+|+++|
T Consensus 140 iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 140 VGDNLNDIEGARNAG 154 (154)
T ss_pred EeCCHHHHHHHHHcc
Confidence 999999999999987
No 50
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.86 E-value=1.2e-21 Score=169.36 Aligned_cols=161 Identities=18% Similarity=0.291 Sum_probs=123.6
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCC---CC-----hhhhhhhcCC--CHHH----HHHHHHHHhCCCCCHHHHH
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE---WD-----GREKHKIVGK--TPLE----EAAIIVEDYGLPCAKHEFV 76 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~---~~-----~~~~~~~~g~--~~~~----~~~~~~~~~~~~~~~~~~~ 76 (383)
+|+||+||||+|+...+..+++.++...+.. +. ........+. ...+ .+..++..++.+.+.+ .
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~- 78 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAEPK-Y- 78 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCCHH-H-
Confidence 5899999999999998888888877664421 11 1111222221 1122 4566667777765443 2
Q ss_pred HHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHH
Q 016755 77 NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 156 (383)
Q Consensus 77 ~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~ 156 (383)
.+.+...+....++||+.++|+ +++++||++...+...+ +++|+..+|+.++++++++..||+|+.|..
T Consensus 79 ---~~~~~~~~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~ 147 (175)
T TIGR01493 79 ---GERLRDAYKNLPPWPDSAAALA-------RVAILSNASHWAFDQFA-QQAGLPWYFDRAFSVDTVRAYKPDPVVYEL 147 (175)
T ss_pred ---HHHHHHHHhcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHH-HHCCCHHHHhhhccHhhcCCCCCCHHHHHH
Confidence 2333333446789999999998 37899999999999888 888999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEecChhhhHHHHhc
Q 016755 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 157 ~~~~lg~~p~e~l~VGDs~~Di~~a~~a 184 (383)
+++++|++|++|++|||+.+|+.+|+++
T Consensus 148 ~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 148 VFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 9999999999999999999999999874
No 51
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.84 E-value=2e-20 Score=164.92 Aligned_cols=187 Identities=26% Similarity=0.265 Sum_probs=139.7
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhh------------------cC-CCHHHHHHHHHHH
Q 016755 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VG-KTPLEEAAIIVED 65 (383)
Q Consensus 5 ~~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~------------------~g-~~~~~~~~~~~~~ 65 (383)
..+++|+|+||++|||+...+.....+..+.+.+|.+++....... .+ ....+.+..+...
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~ 82 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVES 82 (237)
T ss_pred cccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHH
Confidence 4568999999999999987666778888899999988654433211 12 2344444434333
Q ss_pred hCCCCCHHHHHHHHH-----HHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEE
Q 016755 66 YGLPCAKHEFVNEVY-----SMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV 139 (383)
Q Consensus 66 ~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~ 139 (383)
.......+. ..... ..+.... ......++..++++.|++.|..+.++||.....- ..+ ..+++..+||.++
T Consensus 83 ~f~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l-~~~~l~~~fD~vv 159 (237)
T KOG3085|consen 83 TFGKAGIDY-EEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLL-LPLGLSAYFDFVV 159 (237)
T ss_pred Hhccccchh-HHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHh-hccCHHHhhhhhh
Confidence 222111111 11111 1111111 2456778888999999999999999999887654 455 6789999999999
Q ss_pred eCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCC
Q 016755 140 GSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 140 ~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~ 194 (383)
.+.+.+..||+|.+|+.+++++++.|++|++|||+. ||+++|+++|++++.|...
T Consensus 160 ~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 160 ESCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred hhhhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence 999999999999999999999999999999999999 8999999999999999864
No 52
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.83 E-value=7.9e-20 Score=163.71 Aligned_cols=188 Identities=19% Similarity=0.196 Sum_probs=125.9
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhh-hhhc-C-CCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 016755 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIV-G-KTPLEEAAIIVEDYGLPCAKHEFVNEVYS 81 (383)
Q Consensus 5 ~~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~-~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (383)
+.+++++++|||||||+|+. .+.++++.+|.+...... .... + ....+.....+..+. .... +
T Consensus 10 ~~~~~k~iiFD~DGTL~~~~-----~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~-~------- 75 (219)
T TIGR00338 10 LLRSKKLVVFDMDSTLINAE-----TIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLK-GLPV-E------- 75 (219)
T ss_pred hhccCCEEEEeCcccCCCch-----HHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhC-CCCH-H-------
Confidence 34678999999999999984 345556666654332221 1111 1 122222222222221 1111 1
Q ss_pred HHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEE-------eCC---CCCCCCCCh
Q 016755 82 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV-------GSD---EVRTGKPSP 151 (383)
Q Consensus 82 ~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~-------~~~---~~~~~kp~p 151 (383)
.+.......+++||+.++|+.|+++|++++++|++....+...+ +.+|+..+|...+ .+. ....++|+|
T Consensus 76 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 154 (219)
T TIGR00338 76 LLKEVRENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVK-DKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKG 154 (219)
T ss_pred HHHHHHhcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCCceEeeEEEEECCEEEEEecCcccCCcccH
Confidence 12222345679999999999999999999999999999888888 7889887775322 111 123457799
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
..+..++++++++|++|++|||+.+|+.+|+++|+.+++ .. .......++.++.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~---~~~~~~~a~~~i~~~ 210 (219)
T TIGR00338 155 KTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NA---KPKLQQKADICINKK 210 (219)
T ss_pred HHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CC---CHHHHHhchhccCCC
Confidence 999999999999999999999999999999999998654 22 122223556666543
No 53
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.81 E-value=4.2e-19 Score=156.71 Aligned_cols=176 Identities=14% Similarity=0.102 Sum_probs=116.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhh--hhhcCCCHH-HHHHHHHHHh-CCCCCHHHHHHHHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVGKTPL-EEAAIIVEDY-GLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~--~~~~g~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 83 (383)
|+|+|+|||||||+|....+ ..+...++........ ....|.... +......... +... .. ..+.+
T Consensus 3 ~~k~viFD~DGTLid~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~---~~~~~ 72 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSSW----EYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRSG---RL---RREEV 72 (201)
T ss_pred cceEEEEeCCCCCcCCccHH----HHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhccc---CC---CHHHH
Confidence 58899999999999976433 2233334433211111 111122222 1111111111 0000 00 01122
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCC----------ChHH
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP----------SPDI 153 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp----------~p~~ 153 (383)
...+...+++||+.++|+.|+++|++++++|++...+++..+ +.+|+..+|...+..++.+..+| +++.
T Consensus 73 ~~~~~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~ 151 (201)
T TIGR01491 73 EEIFKEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVA-EKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEA 151 (201)
T ss_pred HHHHHhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHH
Confidence 233345789999999999999999999999999999999888 78888877766665544443333 3467
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+..+++++|+++++|++|||+.+|+++++.+|+.+++.+.+
T Consensus 152 ~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 152 VERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEG 192 (201)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCc
Confidence 88889999999999999999999999999999988776653
No 54
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.80 E-value=5.1e-18 Score=150.76 Aligned_cols=184 Identities=13% Similarity=0.083 Sum_probs=125.5
Q ss_pred ccEEEEecCCcccccHHH-------HHHHHHHHHHHcCCCCChhhhhhhcCCC-HHHHHHHHHHHhCCC---CCHHHHHH
Q 016755 9 MSCVILDLDGTLLNTDGM-------FSEVLKTFLVKYGKEWDGREKHKIVGKT-PLEEAAIIVEDYGLP---CAKHEFVN 77 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~-------~~~a~~~~~~~~g~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~---~~~~~~~~ 77 (383)
+++|++|+.||+.+..-+ ..+.+...+..+.-...........+.. ..+....+......+ ....++..
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk~lqg 80 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYESTIVENLRELGKTPEELILLRKLHAEMDKDRKATPLKTLQG 80 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCHHHHHHHHhccCCcHHHHHHHHHHHHHcCCCcchHHHHHH
Confidence 579999999999986322 2233333343332111112222222221 123333333332222 22333433
Q ss_pred H-HHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc---CCcccCcEEEeCCCCCCCCCChHH
Q 016755 78 E-VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH---GWNESFSVIVGSDEVRTGKPSPDI 153 (383)
Q Consensus 78 ~-~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~---gl~~~f~~i~~~~~~~~~kp~p~~ 153 (383)
. +.+.|........++||+.++|+.|+++|++++|+||++...+...+ ++. ++..+|+.++... ...||+|+.
T Consensus 81 ~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~-~~~~~~~L~~~f~~~fd~~--~g~KP~p~~ 157 (220)
T TIGR01691 81 LIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLF-GHSDAGNLTPYFSGYFDTT--VGLKTEAQS 157 (220)
T ss_pred HHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-hhccccchhhhcceEEEeC--cccCCCHHH
Confidence 3 45555554456789999999999999999999999999988877766 443 5667777766432 236999999
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
|..+++++|++|++|++|||+..|+.+|+++|+.++++.+..
T Consensus 158 y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 158 YVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred HHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 999999999999999999999999999999999999987754
No 55
>PLN02954 phosphoserine phosphatase
Probab=99.80 E-value=3e-18 Score=154.05 Aligned_cols=192 Identities=17% Similarity=0.164 Sum_probs=128.1
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhh-hhhhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVG--KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (383)
+++|+|+|||||||+|++ .+..+++.+|....... ...+.+ .+..+.+...+..... ..+ .+...+
T Consensus 10 ~~~k~viFDfDGTL~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~----~~~~~~ 78 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDE-----GIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKP--SLS----QVEEFL 78 (224)
T ss_pred ccCCEEEEeCCCcccchH-----HHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCC--CHH----HHHHHH
Confidence 468999999999999984 34667777876433222 233333 2334444443333321 122 122222
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc--ccCcEE--------EeCCC----CCCCCC
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVI--------VGSDE----VRTGKP 149 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~--~~f~~i--------~~~~~----~~~~kp 149 (383)
.. ....++||+.++|+.|+++|++++|+|++....++..+ +.+|+. .+|... +.+.+ ...+++
T Consensus 79 ~~--~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l-~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~ 155 (224)
T PLN02954 79 EK--RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVA-AILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGG 155 (224)
T ss_pred HH--ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCcc
Confidence 22 13568999999999999999999999999999999888 778886 345321 11221 124577
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccc-cccccchhhcccccc
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDL 214 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~-~~~~a~~vi~~l~e~ 214 (383)
+|+.++.+++++|. ++|++|||+.+|+.+++++|+.+++...+..... ....++.+++++.++
T Consensus 156 K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el 219 (224)
T PLN02954 156 KAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL 219 (224)
T ss_pred HHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence 89999999998875 6899999999999999998888765433322211 233567888887764
No 56
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.78 E-value=1.3e-18 Score=150.47 Aligned_cols=122 Identities=25% Similarity=0.316 Sum_probs=96.6
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCcccCcEEEeC-----------CC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----------DE 143 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~---------------~~i~~~l~~~~gl~~~f~~i~~~-----------~~ 143 (383)
.+++||+.++|+.|+++|++++++||++. ..+...+ ...++. |+.++.+ ++
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~--~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSL-AERDVD--LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCCC--ccEEEECCCCCcccccccCC
Confidence 46899999999999999999999999985 2333344 444444 5665543 34
Q ss_pred CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEE-EEecCCCCccccc-cccchhhcccccc
Q 016755 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHRY-TAADEVINSLLDL 214 (383)
Q Consensus 144 ~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~-i~v~~~~~~~~~~-~~a~~vi~~l~e~ 214 (383)
...+||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+ +++.++....... ..++.+++++.++
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 557899999999999999999999999999999999999999998 7888865432222 3578888888774
No 57
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.78 E-value=2.1e-18 Score=149.84 Aligned_cols=122 Identities=29% Similarity=0.344 Sum_probs=96.3
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCcccCcEEEeC-----CCCCCCCC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----DEVRTGKP 149 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~---------------~~i~~~l~~~~gl~~~f~~i~~~-----~~~~~~kp 149 (383)
+.++||+.++|+.|+++|++++++||... ..+...+ +.+|+ .|+.++.+ ++...+||
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~--~f~~i~~~~~~~~~~~~~~KP 104 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSL-ADRGG--RLDGIYYCPHHPEDGCDCRKP 104 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcCCCC
Confidence 46899999999999999999999999863 2233344 45555 36776653 34577899
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc-cccc--chhhcccccc
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAA--DEVINSLLDL 214 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~-~~~a--~~vi~~l~e~ 214 (383)
+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++...... ...+ +.+++++.++
T Consensus 105 ~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el 172 (181)
T PRK08942 105 KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADL 172 (181)
T ss_pred CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHH
Confidence 999999999999999999999999999999999999999999876432222 2234 6777777764
No 58
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.77 E-value=5.3e-18 Score=159.06 Aligned_cols=184 Identities=15% Similarity=0.161 Sum_probs=123.1
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhh--hcC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK--IVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~--~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (383)
..+++|+|||||||+.. +.+.++++..|.......... ..+ ....+.+...+..+ ........
T Consensus 108 ~~~~LvvfDmDGTLI~~-----e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l--~g~~~~il------- 173 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQI-----ECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATL--KGADANIL------- 173 (322)
T ss_pred cCCCEEEEECCCCCcch-----HHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHh--CCCCHHHH-------
Confidence 46899999999999944 355666666776544332222 122 12223222222211 11111211
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCc-------EEEeCC---CCCCCCCChHH
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-------VIVGSD---EVRTGKPSPDI 153 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~-------~i~~~~---~~~~~kp~p~~ 153 (383)
.......+++||+.++++.|++.|++++|+|++...+++..+ +.+++...+. ..+.+. +...++||++.
T Consensus 174 ~~v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~-~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~ 252 (322)
T PRK11133 174 QQVRENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLR-DKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADT 252 (322)
T ss_pred HHHHHhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHH-HHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHH
Confidence 122235789999999999999999999999999988887766 6788754332 112121 23457899999
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhc
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~ 209 (383)
++.+++++|+++++|++|||+.||+.|++.+|+.+++ +. .+.....++.+++
T Consensus 253 L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nA---kp~Vk~~Ad~~i~ 304 (322)
T PRK11133 253 LTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HA---KPKVNEQAQVTIR 304 (322)
T ss_pred HHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CC---CHHHHhhCCEEec
Confidence 9999999999999999999999999999999998876 22 2333335566665
No 59
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.76 E-value=1.7e-18 Score=145.07 Aligned_cols=102 Identities=27% Similarity=0.400 Sum_probs=84.6
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCcccCcEEEe----CCCCCCCCCCh
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVG----SDEVRTGKPSP 151 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~---------------~~i~~~l~~~~gl~~~f~~i~~----~~~~~~~kp~p 151 (383)
+++||+.++|+.|+++|++++++||.+. ..+...+ +.+|+... ..+++ +++....||+|
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~-~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL-RQLGVAVD-GVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH-HhCCCcee-EEEECCCCCCCCCCCCCCCH
Confidence 5899999999999999999999999873 3445555 66777521 12222 34556689999
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+++..++++++++|++|++|||+..|+++|+++|+.+++++.+
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 9999999999999999999999999999999999999999863
No 60
>PRK06769 hypothetical protein; Validated
Probab=99.76 E-value=3.4e-18 Score=147.15 Aligned_cols=124 Identities=15% Similarity=0.215 Sum_probs=95.8
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChH--------HHHHHHHhhcCCcccCcEEE-eCCCCCCCCCChHHHHHHHHH
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRA--------TIESKISYQHGWNESFSVIV-GSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~--------~i~~~l~~~~gl~~~f~~i~-~~~~~~~~kp~p~~~~~~~~~ 160 (383)
..++||+.++|+.|+++|++++++||+... .....+ +.+|+..+|..+. ++++....||+|+++..++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQEL-KGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHH-HhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 368999999999999999999999998742 122234 4566644332222 355567899999999999999
Q ss_pred cCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcc------c--cccccchhhcccccc
Q 016755 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT------H--RYTAADEVINSLLDL 214 (383)
Q Consensus 161 lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~------~--~~~~a~~vi~~l~e~ 214 (383)
++++|++|++|||+.+|+.+|+++|+.++++.++.... . ....++++++++.++
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el 167 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA 167 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence 99999999999999999999999999999998864321 1 123467778777764
No 61
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.74 E-value=3.7e-17 Score=146.36 Aligned_cols=145 Identities=15% Similarity=0.093 Sum_probs=107.9
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCC-ChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-c
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-C 88 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 88 (383)
+|+|||||||+|+.+.+ .+|.+. +...+....+... +. .+.... .
T Consensus 65 aViFDlDgTLlDSs~~~---------~~G~~~~s~~~~~~l~g~~~--------------------w~----~~~~~~~~ 111 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPGF---------WRGKKTFSPGSEDYLKNQVF--------------------WE----KVNNGWDE 111 (237)
T ss_pred EEEEeCCCccccCcHHH---------hCCcccCCHHHhhhhcChHH--------------------HH----HHHHhccc
Confidence 89999999999998766 155543 3332222222211 11 111111 2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCC----ChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNS----HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~----~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
...+.+++.++|+.++++|++++++||. .+..++..+ +.+|+..+|+.++++++....||++. .+++++++
T Consensus 112 ~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll-~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i- 186 (237)
T TIGR01672 112 FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLA-KNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI- 186 (237)
T ss_pred CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHH-HHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCC-
Confidence 3467777999999999999999999998 556666666 78999999999999888777777765 35567776
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
++||||+.+|+.+|+++|++++.+.++..
T Consensus 187 ---~i~vGDs~~DI~aAk~AGi~~I~V~~g~~ 215 (237)
T TIGR01672 187 ---RIHYGDSDNDITAAKEAGARGIRILRASN 215 (237)
T ss_pred ---eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence 79999999999999999999999988643
No 62
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.73 E-value=6.4e-17 Score=133.05 Aligned_cols=98 Identities=23% Similarity=0.430 Sum_probs=84.8
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCC--------hHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHc-
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSH--------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL- 161 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~--------~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~l- 161 (383)
.++|++.++|+.|+++|++++++||++ ...+...+ +.+++.. +.++.+. ...||+|++|+.+++++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l-~~~~l~~--~~~~~~~--~~~KP~~~~~~~~~~~~~ 99 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRL-EELGVPI--DVLYACP--HCRKPKPGMFLEALKRFN 99 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHH-HHCCCCE--EEEEECC--CCCCCChHHHHHHHHHcC
Confidence 588999999999999999999999998 77777777 7778753 3333333 56799999999999999
Q ss_pred CCCCCcEEEEec-ChhhhHHHHhcCCEEEEecC
Q 016755 162 NMEPSSSLVIED-SVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 162 g~~p~e~l~VGD-s~~Di~~a~~aG~~~i~v~~ 193 (383)
+++|++|+|||| +.+|+.+|+++|+.++++++
T Consensus 100 ~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~ 132 (132)
T TIGR01662 100 EIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP 132 (132)
T ss_pred CCChhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence 599999999999 68999999999999999864
No 63
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.72 E-value=4.9e-18 Score=144.81 Aligned_cols=106 Identities=16% Similarity=0.071 Sum_probs=94.3
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCC-ChHHHHHHHHhhcCCc---------ccCcEEEeCCCCCCCCCChHHHHHHH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHGWN---------ESFSVIVGSDEVRTGKPSPDIFLEAA 158 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~-~~~~i~~~l~~~~gl~---------~~f~~i~~~~~~~~~kp~p~~~~~~~ 158 (383)
...++||+.++|+.|+++|++++++||+ ....+...+ +.+++. ++|+.++++++....||.+.+++.+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L-~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEIL-GTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHH-HhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence 5678999999999999999999999998 777778777 788888 99999999988666677777777777
Q ss_pred HHc--CCCCCcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 159 KRL--NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 159 ~~l--g~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
+.+ |++|++|+||||++.|+.+|+++|+.++++.++.
T Consensus 122 ~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 122 KVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred hcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 777 8999999999999999999999999999998864
No 64
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.72 E-value=3.2e-17 Score=138.93 Aligned_cols=103 Identities=15% Similarity=0.182 Sum_probs=90.5
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCC---------------hHHHHHHHHhhcCCcccCcEEE-e----CCCCCCCCC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIV-G----SDEVRTGKP 149 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~---------------~~~i~~~l~~~~gl~~~f~~i~-~----~~~~~~~kp 149 (383)
++++||+.++|+.|+++|++++++||.+ ...+...+ +.+|+. |+.++ + +++....||
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~ii~~~~~~~~~~~~~KP 104 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIF-RSQGII--FDDVLICPHFPDDNCDCRKP 104 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHCCCc--eeEEEECCCCCCCCCCCCCC
Confidence 4789999999999999999999999973 44566666 778886 66554 4 478888999
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
+|+++..++++++++|++|+||||+.+|+.+|+++|+.++++.++.
T Consensus 105 ~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence 9999999999999999999999999999999999999999998853
No 65
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.72 E-value=1.5e-16 Score=142.41 Aligned_cols=165 Identities=15% Similarity=0.173 Sum_probs=112.3
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh-hhc-C-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIV-G-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
-++|+||+||||++.+..+ . +++.++. ....... .+. + .+..+.+...+..+... .. +.+.+.+.
T Consensus 3 ~~~vifDfDgTi~~~d~~~-~----~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~-~~----~~~~~~~~- 70 (219)
T PRK09552 3 SIQIFCDFDGTITNNDNII-A----IMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSN-LK----EEIIQFLL- 70 (219)
T ss_pred CcEEEEcCCCCCCcchhhH-H----HHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCC-ch----HHHHHHHH-
Confidence 3489999999999997654 2 2333332 1122221 111 1 24455656666554322 11 12222222
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc--cC--cEEEeCCCCCCCCCChHH--------
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SF--SVIVGSDEVRTGKPSPDI-------- 153 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~--~f--~~i~~~~~~~~~kp~p~~-------- 153 (383)
....++||+.++|+.|+++|++++|+|++...+++..+ +.+ +.. .+ +..+.++.....||+|..
T Consensus 71 --~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il-~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~ 146 (219)
T PRK09552 71 --ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLL-QGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCG 146 (219)
T ss_pred --hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHH-HHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCC
Confidence 35789999999999999999999999999999999888 555 432 22 334556666667887754
Q ss_pred --HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEE
Q 016755 154 --FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 154 --~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i 189 (383)
...++++++.++.+|++|||+.+|+.+|+++|+.++
T Consensus 147 ~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 147 CCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred CchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 357888999999999999999999999999999433
No 66
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.69 E-value=6.3e-16 Score=136.96 Aligned_cols=184 Identities=17% Similarity=0.137 Sum_probs=114.6
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcC-CCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHhh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYG-LPCAKHEFVNEVYSMFSDH 86 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 86 (383)
|++|+|||||||++ ..|..+++++|.+..... ..+ ......+..-+.... ...+.+++ ...
T Consensus 1 ~~~v~FD~DGTL~~------~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~i--------~~~ 63 (205)
T PRK13582 1 MEIVCLDLEGVLVP------EIWIAFAEKTGIPELRAT---TRDIPDYDVLMKQRLDILDEHGLGLADI--------QEV 63 (205)
T ss_pred CeEEEEeCCCCChh------hHHHHHHHHcCChHHHHH---hcCCCCHHHHHHHHHHHHHHcCCCHHHH--------HHH
Confidence 57899999999993 244556667775432110 000 112222211111110 01112222 233
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC-C---CCCCCCChHHHHHHHHHcC
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-E---VRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~-~---~~~~kp~p~~~~~~~~~lg 162 (383)
.....++||+.++|+.|+++ ++++++|++...+++..+ +.+|+..+|...+... + .+..++.|.....++++++
T Consensus 64 ~~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~ 141 (205)
T PRK13582 64 IATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLM-RQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALK 141 (205)
T ss_pred HHhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHH-HHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHH
Confidence 34678899999999999999 999999999999999888 7889888776543322 1 1122334455566677777
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccch-hhcccccc
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE-VINSLLDL 214 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~-vi~~l~e~ 214 (383)
..+++|++|||+.+|+.+++++|+.+. +... .......++. +++++.++
T Consensus 142 ~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~--~~~~~~~~~~~~~~~~~el 191 (205)
T PRK13582 142 SLGYRVIAAGDSYNDTTMLGEADAGIL-FRPP--ANVIAEFPQFPAVHTYDEL 191 (205)
T ss_pred HhCCeEEEEeCCHHHHHHHHhCCCCEE-ECCC--HHHHHhCCcccccCCHHHH
Confidence 778999999999999999999998654 3221 1111112333 67777765
No 67
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.68 E-value=1.5e-16 Score=135.74 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=82.6
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChH------------HHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRA------------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~------------~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
++||+.++|+.|+++|++++++||.+.. .+...+ +.+|+.. +.++++++....||+|+++..+++
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l-~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFL-EKLKVPI--QVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHH-HHcCCCE--EEEEecCCCCCCCCccHHHHHHHH
Confidence 6899999999999999999999998763 355666 7788743 566666666678999999999999
Q ss_pred HcC--CCCCcEEEEecCh--------hhhHHHHhcCCEEEE
Q 016755 160 RLN--MEPSSSLVIEDSV--------IGVVAGKAAGMEVVA 190 (383)
Q Consensus 160 ~lg--~~p~e~l~VGDs~--------~Di~~a~~aG~~~i~ 190 (383)
++| +++++|+||||+. +|+++|+++|+.+++
T Consensus 120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 999 9999999999996 699999999998754
No 68
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.67 E-value=2e-15 Score=131.70 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=80.9
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC--------------------CCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE--------------------VRTGK 148 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~--------------------~~~~k 148 (383)
..+++||+.++|+.|+++|++++++|++....++..+ +.+++..+|+.+++++. ...+.
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVL-EGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHH-HHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCC
Confidence 4689999999999999999999999999999999888 78899999999887543 22445
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCE
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~ 187 (383)
+|++.+..++++. ++++++|||+.+|+.+|+++++-
T Consensus 149 ~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 149 CKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred CHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 5777888776654 89999999999999999999763
No 69
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.67 E-value=2e-15 Score=128.61 Aligned_cols=198 Identities=18% Similarity=0.230 Sum_probs=137.8
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHH----HH-HHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLK----TF-LVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY 80 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~----~~-~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (383)
.+++++++||+|.||+.....+..+.+ ++ ..++|.+.+........-....-....-+...+...+..+..+
T Consensus 12 ~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~--- 88 (244)
T KOG3109|consen 12 GPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHR--- 88 (244)
T ss_pred CccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHH---
Confidence 457899999999999987554444443 43 3466766544332111100011111122333444444444433
Q ss_pred HHHHhhh--ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC------CCCCChH
Q 016755 81 SMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR------TGKPSPD 152 (383)
Q Consensus 81 ~~~~~~~--~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~------~~kp~p~ 152 (383)
...... ..++|.+-.+.+|-.|+.++ .++.||++..+..+.| +++|+.+.|+.+++.+-.. ..||.++
T Consensus 89 -~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~L-k~LGieDcFegii~~e~~np~~~~~vcKP~~~ 164 (244)
T KOG3109|consen 89 -FVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRIL-KKLGIEDCFEGIICFETLNPIEKTVVCKPSEE 164 (244)
T ss_pred -HhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHH-HHhChHHhccceeEeeccCCCCCceeecCCHH
Confidence 333332 35788888999999998764 7899999999999999 8999999999998876443 5799999
Q ss_pred HHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 153 IFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 153 ~~~~~~~~lg~~-p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
+|..+.+..|++ |.+|++|.||.++|+.|++.|+.++++...... ..+++++.+..+.
T Consensus 165 afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~----~~~d~~l~~ih~~ 223 (244)
T KOG3109|consen 165 AFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKI----KGVDYALEQIHNN 223 (244)
T ss_pred HHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecc----cchHHHHHHhhch
Confidence 999999999998 999999999999999999999999998774321 1334555555543
No 70
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.66 E-value=6.8e-16 Score=126.62 Aligned_cols=104 Identities=31% Similarity=0.471 Sum_probs=93.2
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCC----------------CCC
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------------KPS 150 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~----------------kp~ 150 (383)
.....++|++.++++.|+++|++++++|++....+...+ +..++..+++.+++....... ||+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELL-EELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPN 98 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHH-HHcCCchhhhheeccchhhhhcccccccccccccccCCCC
Confidence 345689999999999999999999999999999999888 778888788888877665544 999
Q ss_pred hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 151 p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
+..+..++++++..++++++|||+.+|+++++++|+.++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 99 PDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 99999999999999999999999999999999999998764
No 71
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.63 E-value=1.9e-14 Score=126.82 Aligned_cols=161 Identities=17% Similarity=0.101 Sum_probs=105.6
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHH---hCCCCCHHHHHHHHHHHHHh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED---YGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 85 (383)
+++++|||||||++. .|.++..+.|... ............+..+.-+.. .|++ .+.+ .+
T Consensus 1 ~~la~FDlD~TLi~~------~w~~~~~~~g~~~--~~~~~~~~~~~~~~~~~r~~ll~~~g~~--~~~i--------~~ 62 (203)
T TIGR02137 1 MEIACLDLEGVLVPE------IWIAFAEKTGIDA--LKATTRDIPDYDVLMKQRLRILDEHGLK--LGDI--------QE 62 (203)
T ss_pred CeEEEEeCCcccHHH------HHHHHHHHcCCcH--HHHHhcCCcCHHHHHHHHHHHHHHCCCC--HHHH--------HH
Confidence 357999999999964 4667777777421 111111111222222222222 2333 2222 22
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcE--------EEeCCCCCCCCCChHHHHHH
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--------IVGSDEVRTGKPSPDIFLEA 157 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~--------i~~~~~~~~~kp~p~~~~~~ 157 (383)
....++++||+.++++.+++.+ +++++|++...+++..+ +.+|+..+|.. .+.+... ..++.+......
T Consensus 63 ~~~~i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il-~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~ 139 (203)
T TIGR02137 63 VIATLKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVIA 139 (203)
T ss_pred HHHhCCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHH-HHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHHH
Confidence 3345689999999999999975 99999999999999888 88999877752 2222222 234444444444
Q ss_pred HHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 158 ~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+++.+. +|++|||+.||+.+++.+|+.++....
T Consensus 140 l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 140 FKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAP 172 (203)
T ss_pred HHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence 456553 899999999999999999999887766
No 72
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.63 E-value=9.2e-15 Score=129.39 Aligned_cols=172 Identities=22% Similarity=0.293 Sum_probs=116.8
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCC---HHHHHHHHHHH-hCCCCCHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKT---PLEEAAIIVED-YGLPCAKHEFVNEVYSM 82 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 82 (383)
.++++++|||||||++. ..+..+.+..|............... ........... .+.+ .+..+.+.+.
T Consensus 3 ~~~~L~vFD~D~TLi~~-----~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~---~~~v~~~~~~ 74 (212)
T COG0560 3 RMKKLAVFDLDGTLINA-----ELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLP---VEVLEEVREE 74 (212)
T ss_pred CccceEEEecccchhhH-----HHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCC---HHHHHHHHHh
Confidence 46789999999999982 23344444445433222221111111 11222111111 1222 2222222221
Q ss_pred HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC----------CCCCCCChH
Q 016755 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPD 152 (383)
Q Consensus 83 ~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~----------~~~~kp~p~ 152 (383)
+ .+++||+.++++.+++.|++++++|+++..+++... +.+|+...+...+..++ ...++.+..
T Consensus 75 ~------~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia-~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~ 147 (212)
T COG0560 75 F------LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIA-ERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAK 147 (212)
T ss_pred c------CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHH-HHhCCchheeeEEEEeCCEEeceeeeeecCcchHHH
Confidence 1 789999999999999999999999999998888877 88999877766555444 113345788
Q ss_pred HHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 153 ~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
.+..+++++|+++++++++|||.||+.|.+.+|.+++.-+.
T Consensus 148 ~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~ 188 (212)
T COG0560 148 ALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPK 188 (212)
T ss_pred HHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcC
Confidence 89999999999999999999999999999999998876655
No 73
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.62 E-value=1.9e-14 Score=127.08 Aligned_cols=179 Identities=17% Similarity=0.156 Sum_probs=116.2
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCChh-------hhhhhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR-------EKHKIVG--KTPLEEAAIIVEDYGLPCAKHEFVNEVYS 81 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~-------~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (383)
+++||+||||++.+..+ ..+...+.+.. ..... ....+.+ ....+....+....-...+.+++.....+
T Consensus 1 ~a~FD~DgTL~~~~s~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~ 78 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLF-IFLKFLASKNI-LFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEE 78 (202)
T ss_pred CeEEccCCCCCCCchHH-HHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 37999999999875432 22333332221 11000 0111111 11222222222211122345555444444
Q ss_pred HHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcE-EEeCC----------CCCCCCCC
Q 016755 82 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-IVGSD----------EVRTGKPS 150 (383)
Q Consensus 82 ~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~-i~~~~----------~~~~~kp~ 150 (383)
.+.+.+ ...++|++.++++.++++|++++++|+++...++..+ +.+|+..+|.. +...+ ....++++
T Consensus 79 ~~~~~~-~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~-~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K 156 (202)
T TIGR01490 79 FVNQKI-ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLA-RILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGK 156 (202)
T ss_pred HHHHHH-HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHcCCcceEecceEEcCCCEEeCCccCCCCCChHH
Confidence 444333 3468999999999999999999999999999999888 78888776654 22211 12345677
Q ss_pred hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 151 p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
...++.++++.++++++|+++|||.+|+++++.+|..+++.+.
T Consensus 157 ~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 157 VHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred HHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence 8889999999999999999999999999999999998876543
No 74
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.62 E-value=5.2e-16 Score=144.05 Aligned_cols=120 Identities=23% Similarity=0.318 Sum_probs=90.9
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHHH-HHHHhhcCCcccCcEEE---eCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATIE-SKISYQHGWNESFSVIV---GSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~-~~l~~~~gl~~~f~~i~---~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.++++.++++.|+++|. +.++||.+..... ..+ ...++..+|+.+. .++....+||+|.++..+++++|++|++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~-~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~ 221 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGS-RTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPAR 221 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCC-cccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhh
Confidence 46789999999998887 7899998764421 112 2345555555543 2344567999999999999999999999
Q ss_pred EEEEecCh-hhhHHHHhcCCEEEEecCCCCccccc----------cccchhhccccc
Q 016755 168 SLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----------TAADEVINSLLD 213 (383)
Q Consensus 168 ~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~----------~~a~~vi~~l~e 213 (383)
|+||||++ .|+.+|+++|+.+++|.++....... ..|+++++++.+
T Consensus 222 ~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~ 278 (279)
T TIGR01452 222 TLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLAD 278 (279)
T ss_pred EEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEeccccc
Confidence 99999996 99999999999999999875543221 246777777655
No 75
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.60 E-value=1.3e-15 Score=139.37 Aligned_cols=122 Identities=20% Similarity=0.189 Sum_probs=96.1
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCC---CCCCCChHHHHHHHHHcCCCCCcE
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV---RTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~---~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
.++++.+.++.|+..+++++++||.+..+....+ ..+|+..+|+.+...... ..+||+|.++..+++++|++|++|
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 199 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDG-LALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEA 199 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCC-CCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhE
Confidence 3568888899999889999999998877655444 556777777766544332 248999999999999999999999
Q ss_pred EEEecCh-hhhHHHHhcCCEEEEecCCCCccc----cccccchhhcccccc
Q 016755 169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH----RYTAADEVINSLLDL 214 (383)
Q Consensus 169 l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~----~~~~a~~vi~~l~e~ 214 (383)
+||||+. +|+.+|+++|+.+++|.++..... ....++++++++.++
T Consensus 200 ~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el 250 (257)
T TIGR01458 200 VMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA 250 (257)
T ss_pred EEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence 9999997 899999999999999988742211 123567788887764
No 76
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.59 E-value=1.4e-14 Score=124.38 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=83.5
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCC-hHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~-~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
.++||+.++|+.|++.|++++++||++ ...+...+ +.+++..+ .+..||+|+++..+++++++++++|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~-~~~gl~~~---------~~~~KP~p~~~~~~l~~~~~~~~~~l 112 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVE-KALGIPVL---------PHAVKPPGCAFRRAHPEMGLTSEQVA 112 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHH-HHcCCEEE---------cCCCCCChHHHHHHHHHcCCCHHHEE
Confidence 567899999999999999999999998 55555555 56665321 13479999999999999999999999
Q ss_pred EEecCh-hhhHHHHhcCCEEEEecCCCCccc
Q 016755 170 VIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH 199 (383)
Q Consensus 170 ~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~ 199 (383)
+|||+. .|+.+|+++|+.++++.++.....
T Consensus 113 ~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~ 143 (170)
T TIGR01668 113 VVGDRLFTDVMGGNRNGSYTILVEPLVHPDQ 143 (170)
T ss_pred EECCcchHHHHHHHHcCCeEEEEccCcCCcc
Confidence 999998 799999999999999998765444
No 77
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.59 E-value=2.9e-14 Score=127.16 Aligned_cols=160 Identities=16% Similarity=0.195 Sum_probs=105.6
Q ss_pred EEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhh-hhh-c-CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhc
Q 016755 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKI-V-GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC 88 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~-~~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (383)
|+||+||||++.+... .. ++.++.+ ....+ ... . ..+..+.++..+.....+ . .+.+.+.+. .
T Consensus 2 ~~fDFDgTit~~d~~~-~~----~~~~~~~-~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~--~---~~~~~~~~~---~ 67 (214)
T TIGR03333 2 IICDFDGTITNNDNII-SI----MKQFAPP-EWEALKDGVLSKTLSIQEGVGRMFGLLPSS--L---KEEITSFVL---E 67 (214)
T ss_pred EEeccCCCCCcchhHH-HH----HHHhCcH-HHHHHHHHHHcCCccHHHHHHHHHhhCCCc--h---HHHHHHHHH---h
Confidence 7999999999875432 11 1122111 11111 111 1 223566666666554322 1 112222222 2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC---cEEEeCCCCCCCCCChHHH----------H
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF---SVIVGSDEVRTGKPSPDIF----------L 155 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f---~~i~~~~~~~~~kp~p~~~----------~ 155 (383)
...+.||+.++++.|+++|++++|+|++...+++..+ +.++....+ +.++.++.+...+|+|..+ .
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il-~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLL-EGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHH-HhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 4689999999999999999999999999999999888 554433332 2344455556667877654 4
Q ss_pred HHHHHcCCCCCcEEEEecChhhhHHHHhcCC
Q 016755 156 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 156 ~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~ 186 (383)
.++++++..+++++||||+.+|+.+|+.+|+
T Consensus 147 ~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 147 SLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 6777888889999999999999999999998
No 78
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.57 E-value=8.3e-15 Score=119.61 Aligned_cols=88 Identities=19% Similarity=0.166 Sum_probs=77.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCC-ChHHHHHHHHhhcC-------CcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHG-------WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~-~~~~i~~~l~~~~g-------l~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
+++||+.++|+.|+++|++++++||+ ....+...+ +..+ +..+|+.++++++ +|+|+.+..+++++|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l-~~~~~~~~i~~l~~~f~~~~~~~~----~pkp~~~~~a~~~lg 103 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELL-KIFEDFGIIFPLAEYFDPLTIGYW----LPKSPRLVEIALKLN 103 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHH-HhccccccchhhHhhhhhhhhcCC----CcHHHHHHHHHHHhc
Confidence 58899999999999999999999999 777777777 6667 7888898888764 589999999999999
Q ss_pred --CCCCcEEEEecChhhhHHHHh
Q 016755 163 --MEPSSSLVIEDSVIGVVAGKA 183 (383)
Q Consensus 163 --~~p~e~l~VGDs~~Di~~a~~ 183 (383)
++|++|+||||+..|+...++
T Consensus 104 ~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 104 GVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CCCCcceEEEECCCHhHHHHHHh
Confidence 999999999999999877654
No 79
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.57 E-value=4.4e-14 Score=122.01 Aligned_cols=95 Identities=21% Similarity=0.238 Sum_probs=78.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC------------CCCCCCCChHHHHH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD------------EVRTGKPSPDIFLE 156 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~------------~~~~~kp~p~~~~~ 156 (383)
...+.||+.++++.++++|++++++|++...+++..+ +.+|+..+|...+..+ ....+..|+..+..
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~-~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~ 149 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVA-EKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKE 149 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHH
Confidence 4668899999999999999999999999999999888 7788877665443322 12234556788999
Q ss_pred HHHHcCCCCCcEEEEecChhhhHHHHhc
Q 016755 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 157 ~~~~lg~~p~e~l~VGDs~~Di~~a~~a 184 (383)
++++++++++++++|||+.+|+.+++.+
T Consensus 150 ~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 150 LLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 8999999999999999999999998764
No 80
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.55 E-value=5.4e-14 Score=125.88 Aligned_cols=98 Identities=15% Similarity=0.123 Sum_probs=79.8
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCC----hHHHHHHHHhhcCC--cccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSH----RATIESKISYQHGW--NESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~----~~~i~~~l~~~~gl--~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
...|+||+.++|+.|+++|++++++||.. ...+...+ +.+|+ .++|+.+++++.. .||++.. ++++++
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Ll-k~~gip~~~~f~vil~gd~~--~K~~K~~---~l~~~~ 185 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLA-DDFHIPADNMNPVIFAGDKP--GQYTKTQ---WLKKKN 185 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHH-HHcCCCcccceeEEEcCCCC--CCCCHHH---HHHhcC
Confidence 46789999999999999999999999964 33444444 67899 7888888888763 5676643 555666
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
+ +++|||+.+|+.+|++||+.++.+.++..
T Consensus 186 i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 186 I----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred C----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 5 99999999999999999999999988654
No 81
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.54 E-value=4.9e-14 Score=133.11 Aligned_cols=102 Identities=17% Similarity=0.215 Sum_probs=86.5
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCC---------------ChHHHHHHHHhhcCCcccCcEEEe-----CCCCCCCCC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNS---------------HRATIESKISYQHGWNESFSVIVG-----SDEVRTGKP 149 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~---------------~~~~i~~~l~~~~gl~~~f~~i~~-----~~~~~~~kp 149 (383)
..++||+.++|..|++.|++++|+||. +...+...+ +..++. |+.++. +++...+||
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL-~~~gl~--fd~i~i~~~~~sd~~~~rKP 105 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIF-ESQGIK--FDEVLICPHFPEDNCSCRKP 105 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHH-HHcCCc--eeeEEEeCCcCcccCCCCCC
Confidence 579999999999999999999999995 233444455 566763 566543 356678999
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+|+++..++++++++|++++||||+.+|+.+|+++|+.++++++.
T Consensus 106 ~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~ 150 (354)
T PRK05446 106 KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARE 150 (354)
T ss_pred CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence 999999999999999999999999999999999999999999763
No 82
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.53 E-value=3.2e-14 Score=126.54 Aligned_cols=90 Identities=31% Similarity=0.430 Sum_probs=78.2
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
.++.|++.++|+.|++.|++++++|+.......... +.+|+. +.++.+... +||.+.++..++++++.++++|+
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~-~~lgi~---~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~ 199 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIA-KQLGIF---DSIVFARVI--GKPEPKIFLRIIKELQVKPGEVA 199 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHH-HHTTSC---SEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccc-cccccc---ccccccccc--ccccchhHHHHHHHHhcCCCEEE
Confidence 468899999999999999999999998888887777 788883 344433333 89999999999999999999999
Q ss_pred EEecChhhhHHHHhcC
Q 016755 170 VIEDSVIGVVAGKAAG 185 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG 185 (383)
||||+.||+.|+++||
T Consensus 200 ~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 200 MVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEESSGGHHHHHHHSS
T ss_pred EEccCHHHHHHHHhCc
Confidence 9999999999999987
No 83
>PRK10444 UMP phosphatase; Provisional
Probab=99.51 E-value=1.6e-14 Score=131.20 Aligned_cols=72 Identities=24% Similarity=0.350 Sum_probs=61.0
Q ss_pred CCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccc----cccchhhcccccc
Q 016755 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDL 214 (383)
Q Consensus 143 ~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~----~~a~~vi~~l~e~ 214 (383)
....+||+|+++..+++++++++++|+||||+. +|+.+|+++|+.+++|.++....... ..++++++++.++
T Consensus 169 ~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 169 PFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred ccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 344689999999999999999999999999997 89999999999999999876543332 3567888888775
No 84
>PRK11590 hypothetical protein; Provisional
Probab=99.49 E-value=1.1e-12 Score=116.64 Aligned_cols=176 Identities=15% Similarity=0.126 Sum_probs=108.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHH-HHcCCCCCh-hhhhhhcCCCHHHHHHH-------HHH--HhCCCCCHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFL-VKYGKEWDG-REKHKIVGKTPLEEAAI-------IVE--DYGLPCAKHEFV 76 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~-~~~g~~~~~-~~~~~~~g~~~~~~~~~-------~~~--~~~~~~~~~~~~ 76 (383)
..|+++||+||||++.. ....+..++ ++.+..... .......|.+....... ++. ..+. +.+++
T Consensus 5 ~~k~~iFD~DGTL~~~d--~~~~~~~~~~~~~g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~--~~~~~- 79 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD--MFGSFLRYLLRRQPLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGH--SEARL- 79 (211)
T ss_pred cceEEEEecCCCCcccc--hHHHHHHHHHHhcchhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCC--CHHHH-
Confidence 56799999999999443 334444444 777755332 44445555544332221 111 1132 23322
Q ss_pred HHHHHHHHhhh-ccCCCCchHHHHH-HHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC-CC---------
Q 016755 77 NEVYSMFSDHL-CKVKALPGANRLI-KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-EV--------- 144 (383)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~pg~~~lL-~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~-~~--------- 144 (383)
+.+.+.+.+.+ ....++||+.++| +.+++.|++++++|+++..+++..+ ..+|+.. .+.++++. +.
T Consensus 80 ~~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il-~~l~~~~-~~~~i~t~l~~~~tg~~~g~ 157 (211)
T PRK11590 80 QALEADFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVY-FDTPWLP-RVNLIASQMQRRYGGWVLTL 157 (211)
T ss_pred HHHHHHHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHH-HHccccc-cCceEEEEEEEEEccEECCc
Confidence 22222333322 2257799999999 5688899999999999999999888 6666422 23444432 11
Q ss_pred -CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 145 -RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 145 -~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
..|..|...++. .++.+...+.+.|||.+|+.+.+.+|-+.++-+.
T Consensus 158 ~c~g~~K~~~l~~---~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 158 RCLGHEKVAQLER---KIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred cCCChHHHHHHHH---HhCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 122223333333 3466778899999999999999999998766544
No 85
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.49 E-value=3.6e-14 Score=120.84 Aligned_cols=84 Identities=11% Similarity=0.184 Sum_probs=74.5
Q ss_pred HHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 016755 100 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179 (383)
Q Consensus 100 L~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~ 179 (383)
+..|+++|++++++|+.+...+...+ +.+|+..+|+. .||+|+.++.+++++++++++|++|||+.||+.
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l-~~lgi~~~f~~---------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~ 112 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRA-EELKIKRFHEG---------IKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLS 112 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHH-HHCCCcEEEec---------CCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHH
Confidence 56677889999999999999999988 88999877653 279999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecC
Q 016755 180 AGKAAGMEVVAVPS 193 (383)
Q Consensus 180 ~a~~aG~~~i~v~~ 193 (383)
+++.+|+.+++-+.
T Consensus 113 ~~~~ag~~~am~nA 126 (169)
T TIGR02726 113 MMKRVGLAVAVGDA 126 (169)
T ss_pred HHHHCCCeEECcCc
Confidence 99999998776543
No 86
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.48 E-value=4.1e-14 Score=128.98 Aligned_cols=77 Identities=27% Similarity=0.400 Sum_probs=61.2
Q ss_pred EEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccc----cccchhhccc
Q 016755 137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSL 211 (383)
Q Consensus 137 ~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~----~~a~~vi~~l 211 (383)
...+.+....+||+|.+++.++++++++++++++|||++ +|+.+|+++|+++++|.++....... ..++.+++++
T Consensus 167 ~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l 246 (249)
T TIGR01457 167 VATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSL 246 (249)
T ss_pred HHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCCh
Confidence 344555666889999999999999999999999999997 89999999999999999875433221 2456666665
Q ss_pred cc
Q 016755 212 LD 213 (383)
Q Consensus 212 ~e 213 (383)
.+
T Consensus 247 ~~ 248 (249)
T TIGR01457 247 AE 248 (249)
T ss_pred hh
Confidence 44
No 87
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.47 E-value=9e-14 Score=117.28 Aligned_cols=84 Identities=18% Similarity=0.240 Sum_probs=73.9
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
++++|+++|++++++||.+...+...+ +.+|+..+|+. .+|+|+.+..+++++|+++++|++|||+.+|+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l-~~~gi~~~~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~ 105 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRC-KTLGITHLYQG---------QSNKLIAFSDILEKLALAPENVAYIGDDLIDW 105 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHH-HHcCCCEEEec---------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 689999999999999999999888888 88888655442 37899999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecC
Q 016755 179 VAGKAAGMEVVAVPS 193 (383)
Q Consensus 179 ~~a~~aG~~~i~v~~ 193 (383)
.+++.+|+. +.+..
T Consensus 106 ~~~~~ag~~-~~v~~ 119 (154)
T TIGR01670 106 PVMEKVGLS-VAVAD 119 (154)
T ss_pred HHHHHCCCe-EecCC
Confidence 999999997 45544
No 88
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.47 E-value=5.7e-13 Score=109.34 Aligned_cols=97 Identities=24% Similarity=0.389 Sum_probs=82.8
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEe
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VG 172 (383)
-|.+.+-+.++++.|+++.++||+.+.-+.... +.+|+ +.+. ..+||-+..+..+++++++++++|+|||
T Consensus 48 tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~-~~l~v----~fi~-----~A~KP~~~~fr~Al~~m~l~~~~vvmVG 117 (175)
T COG2179 48 TPELRAWLAELKEAGIKVVVVSNNKESRVARAA-EKLGV----PFIY-----RAKKPFGRAFRRALKEMNLPPEEVVMVG 117 (175)
T ss_pred CHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhh-hhcCC----ceee-----cccCccHHHHHHHHHHcCCChhHEEEEc
Confidence 344566678889999999999999998888777 77876 4443 4689999999999999999999999999
Q ss_pred cCh-hhhHHHHhcCCEEEEecCCCCccc
Q 016755 173 DSV-IGVVAGKAAGMEVVAVPSLPKQTH 199 (383)
Q Consensus 173 Ds~-~Di~~a~~aG~~~i~v~~~~~~~~ 199 (383)
|.. +|+.++..+|+++|.|.+....+.
T Consensus 118 DqL~TDVlggnr~G~~tIlV~Pl~~~d~ 145 (175)
T COG2179 118 DQLFTDVLGGNRAGMRTILVEPLVAPDG 145 (175)
T ss_pred chhhhhhhcccccCcEEEEEEEeccccc
Confidence 999 899999999999999988644333
No 89
>PLN02645 phosphoglycolate phosphatase
Probab=99.46 E-value=4.5e-14 Score=132.93 Aligned_cols=105 Identities=21% Similarity=0.241 Sum_probs=76.1
Q ss_pred CEEEEeCCChHH-HHHHHHhhcCCcccCcEEEeCCCCC---CCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHh
Q 016755 109 PMALASNSHRAT-IESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKA 183 (383)
Q Consensus 109 ~~~i~s~~~~~~-i~~~l~~~~gl~~~f~~i~~~~~~~---~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~ 183 (383)
.+.++||.+..+ ....+ ..+|...+|+.+....... .+||+|.++..+++++++++++++||||++ +|+.+|++
T Consensus 188 ~~~i~tn~d~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~ 266 (311)
T PLN02645 188 CLFIATNRDAVTHLTDAQ-EWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQN 266 (311)
T ss_pred CEEEEeCCCCCCCCCCCC-CccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHH
Confidence 466777766533 22222 3345555566555444322 479999999999999999999999999998 99999999
Q ss_pred cCCEEEEecCCCCccccc------cccchhhcccccc
Q 016755 184 AGMEVVAVPSLPKQTHRY------TAADEVINSLLDL 214 (383)
Q Consensus 184 aG~~~i~v~~~~~~~~~~------~~a~~vi~~l~e~ 214 (383)
+|+.+++|.++....... ..++.+++++.++
T Consensus 267 aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l 303 (311)
T PLN02645 267 GGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF 303 (311)
T ss_pred cCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence 999999998875433221 3467888888775
No 90
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.37 E-value=7.7e-13 Score=114.89 Aligned_cols=81 Identities=17% Similarity=0.280 Sum_probs=70.2
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
.++.|+++|++++++|+.+...+...+ +.+|+..+|+ + .+++++.++.+++++|+++++|+||||+.+|+
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l-~~lgl~~~f~----g-----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRM-TTLGITHLYQ----G-----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHH-HHcCCceeec----C-----CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 456667789999999999999888888 7788865553 2 35678999999999999999999999999999
Q ss_pred HHHHhcCCEEE
Q 016755 179 VAGKAAGMEVV 189 (383)
Q Consensus 179 ~~a~~aG~~~i 189 (383)
.+++++|+.++
T Consensus 126 ~~a~~aG~~~~ 136 (183)
T PRK09484 126 PVMEKVGLSVA 136 (183)
T ss_pred HHHHHCCCeEe
Confidence 99999999854
No 91
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.36 E-value=2.8e-12 Score=120.48 Aligned_cols=104 Identities=17% Similarity=0.109 Sum_probs=94.6
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-cCcEEEeCC-------CCCCCCCChHHHHHHHHHc
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSD-------EVRTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~-~f~~i~~~~-------~~~~~kp~p~~~~~~~~~l 161 (383)
..++|++.++++.|+++|++++++|+.+.......+ +.+++.. +|+.+++.+ +...+||+|+.+..+++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l-~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTV-EWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHH-HHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 468899999999999999999999999999888888 7788886 899988887 4556899999999999999
Q ss_pred CC-CCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 162 NM-EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 162 g~-~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+. ++++|++|||+.+|+.+|+++|+.+++|.++
T Consensus 265 ~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 265 IAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred hccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 98 6799999999999999999999999999875
No 92
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.35 E-value=1.2e-11 Score=112.13 Aligned_cols=210 Identities=19% Similarity=0.220 Sum_probs=119.3
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHH--HHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHH---
Q 016755 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKT--FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEV--- 79 (383)
Q Consensus 5 ~~~~ik~viFDlDGTL~d~~~~~~~a~~~--~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 79 (383)
.++++++++||+||||++....+..+... .+++.|.++- .+...-..+.....+.+....+.+.+++.+...-
T Consensus 4 ~~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~i--flTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at 81 (269)
T COG0647 4 VMDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVI--FLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDAT 81 (269)
T ss_pred hhhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeEE--EEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHH
Confidence 45678999999999999987666554333 2345554431 2222223333334444444356655555544322
Q ss_pred HHHHHhhhccCCCC-chHHHHHHHHHHCCCCEEEEeCC-----------Ch---HHHHHHH-HhhcCCccc---CcEEE-
Q 016755 80 YSMFSDHLCKVKAL-PGANRLIKHLSCHGVPMALASNS-----------HR---ATIESKI-SYQHGWNES---FSVIV- 139 (383)
Q Consensus 80 ~~~~~~~~~~~~~~-pg~~~lL~~L~~~G~~~~i~s~~-----------~~---~~i~~~l-~~~~gl~~~---f~~i~- 139 (383)
...+.+.....+.+ =|...+.+.|+..|+.+.--.+. .. +.....+ .-..|..-. -|.++
T Consensus 82 ~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p 161 (269)
T COG0647 82 ADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVP 161 (269)
T ss_pred HHHHHhhCCCCEEEEECCcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCcccc
Confidence 22222222212222 25555566666666433221111 10 1111111 001111000 01111
Q ss_pred -------------------eCCC-CCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCcc
Q 016755 140 -------------------GSDE-VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT 198 (383)
Q Consensus 140 -------------------~~~~-~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~ 198 (383)
++.+ ...|||.+.++..++++++.++++++||||++ +||.+|+++|+.++.|..|....
T Consensus 162 ~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~ 241 (269)
T COG0647 162 TERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSA 241 (269)
T ss_pred CCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCCh
Confidence 1112 24789999999999999999999999999999 79999999999999999986533
Q ss_pred cc----ccccchhhccccccCc
Q 016755 199 HR----YTAADEVINSLLDLRP 216 (383)
Q Consensus 199 ~~----~~~a~~vi~~l~e~~~ 216 (383)
.. ...++++++++.++..
T Consensus 242 ~~~~~~~~~p~~v~~sl~~~~~ 263 (269)
T COG0647 242 EDLDRAEVKPTYVVDSLAELIT 263 (269)
T ss_pred hhhhhhccCCcchHhhHHHHHh
Confidence 32 2356888888887543
No 93
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.35 E-value=1.5e-12 Score=109.15 Aligned_cols=96 Identities=16% Similarity=0.075 Sum_probs=86.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-cCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~-~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
...++||+.++|++|+ ++++++++|++...+++..+ +.+++.. +|+.+++++++..+||+ +.++++++|.+|++
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il-~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~ 117 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVL-DLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSN 117 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHH-HHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhc
Confidence 4578999999999998 57999999999999999888 7788854 56999999999999987 88899999999999
Q ss_pred EEEEecChhhhHHHHhcCCEEE
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i 189 (383)
|++|||+++|+.++.++|+.+-
T Consensus 118 ~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 118 VIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred EEEEECCHHHhhcCccCEEEec
Confidence 9999999999999999988543
No 94
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.31 E-value=3.9e-12 Score=120.30 Aligned_cols=90 Identities=22% Similarity=0.152 Sum_probs=81.8
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhh----cCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ----HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~----~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
++||+.++|+.|+++|+.++++|+++...+...+ +. +++.++|+.+.++ .||+|+.++.+++++|+.+++
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l-~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i~~~~ 105 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVF-ERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNLGTDS 105 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH-HhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCCCcCc
Confidence 5789999999999999999999999999999888 66 7888888887655 589999999999999999999
Q ss_pred EEEEecChhhhHHHHhcCCE
Q 016755 168 SLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~ 187 (383)
++||||++.|+.++++++-.
T Consensus 106 ~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 106 FLFIDDNPAERANVKITLPV 125 (320)
T ss_pred EEEECCCHHHHHHHHHHCCC
Confidence 99999999999999998764
No 95
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.30 E-value=1.8e-12 Score=117.36 Aligned_cols=49 Identities=29% Similarity=0.537 Sum_probs=45.6
Q ss_pred CCCCChHHHHHHHHHcCCCCCcE-EEEecCh-hhhHHHHhcCCEEEEecCC
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSS-LVIEDSV-IGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~-l~VGDs~-~Di~~a~~aG~~~i~v~~~ 194 (383)
.+||+|.++..++++++++++++ +||||++ +|+.+|+++|+.+++|.++
T Consensus 186 ~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 186 VGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred ecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 67999999999999999999887 9999999 8999999999999998653
No 96
>PRK08238 hypothetical protein; Validated
Probab=99.29 E-value=6.7e-11 Score=116.79 Aligned_cols=97 Identities=13% Similarity=0.075 Sum_probs=78.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
..++.||+.+++++++++|++++++|++++..++..+ +++|+ |+.++++++....||++... .+.+.++ .+++
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~-~~lGl---Fd~Vigsd~~~~~kg~~K~~-~l~~~l~--~~~~ 142 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVA-AHLGL---FDGVFASDGTTNLKGAAKAA-ALVEAFG--ERGF 142 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCC---CCEEEeCCCccccCCchHHH-HHHHHhC--ccCe
Confidence 3567899999999999999999999999999999888 77887 79999998877676655432 2334554 3668
Q ss_pred EEEecChhhhHHHHhcCCEEEEecC
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+++||+.+|+.+++.+|- .+.|+.
T Consensus 143 ~yvGDS~~Dlp~~~~A~~-av~Vn~ 166 (479)
T PRK08238 143 DYAGNSAADLPVWAAARR-AIVVGA 166 (479)
T ss_pred eEecCCHHHHHHHHhCCC-eEEECC
Confidence 999999999999999995 445554
No 97
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.28 E-value=3.6e-10 Score=106.18 Aligned_cols=105 Identities=19% Similarity=0.207 Sum_probs=86.3
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc-C-------CcccCcEEEeCCCCC---------------
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH-G-------WNESFSVIVGSDEVR--------------- 145 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~-g-------l~~~f~~i~~~~~~~--------------- 145 (383)
.+.+.||+.++|+.|+++|++++++||++..+++..+ +.+ | +.++|+.|+++..-+
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im-~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGM-KYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 3677999999999999999999999999999999888 554 6 899999999875311
Q ss_pred --CCCC------------ChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHH-hcCCEEEEecCC
Q 016755 146 --TGKP------------SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPSL 194 (383)
Q Consensus 146 --~~kp------------~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~-~aG~~~i~v~~~ 194 (383)
..++ ...-.....+.+|+.+++++||||++ .|+..++ .+||.+++|.+.
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE 325 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE 325 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence 0011 11336667888999999999999999 7999998 999999988773
No 98
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.28 E-value=1.2e-11 Score=114.39 Aligned_cols=117 Identities=14% Similarity=0.047 Sum_probs=72.0
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCCh-----HHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHR-----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~-----~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
++++.+++..++..+..+.++++.+. ...+... +.+++...+...-.-+-...+..++.+++.+++++|+++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e 217 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVE-HELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKN 217 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHh-hhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHH
Confidence 45667777777766666777776542 2222222 33443210000000122234555788999999999999999
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
|++|||+.||++|++.+|+.+++ ++..+.....|+.++.+-.+
T Consensus 218 ~i~~GD~~NDi~m~~~ag~~vam---gna~~~lk~~Ad~v~~~n~~ 260 (272)
T PRK10530 218 VVAFGDNFNDISMLEAAGLGVAM---GNADDAVKARADLVIGDNTT 260 (272)
T ss_pred eEEeCCChhhHHHHHhcCceEEe---cCchHHHHHhCCEEEecCCC
Confidence 99999999999999999985433 33333333455666655443
No 99
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.28 E-value=1.6e-10 Score=105.25 Aligned_cols=95 Identities=20% Similarity=0.268 Sum_probs=81.7
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEE------EeCCCCCCCCCCh---------HH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI------VGSDEVRTGKPSP---------DI 153 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i------~~~~~~~~~kp~p---------~~ 153 (383)
.+.+.||+.++++.|+++|++++|+|++....++..+ +.+|+...+..+ +..+....|+|.| ..
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL-~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v 197 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVL-RQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV 197 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-HHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence 6889999999999999999999999999999999999 778887666666 4445555677777 67
Q ss_pred HHHHHHHcC--CCCCcEEEEecChhhhHHHHhc
Q 016755 154 FLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 154 ~~~~~~~lg--~~p~e~l~VGDs~~Di~~a~~a 184 (383)
++.+++.++ .++++|++|||+.+|+.||...
T Consensus 198 ~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 198 ALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 777888898 8999999999999999998776
No 100
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.27 E-value=1.9e-10 Score=102.54 Aligned_cols=169 Identities=17% Similarity=0.171 Sum_probs=111.2
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh-hhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHhhhc
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSDHLC 88 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 88 (383)
+|+||+|+||+|.+... .+++.++.......+. .+......+....++..+... .+.++ +.+.+.
T Consensus 2 LvvfDFD~TIvd~dsd~-----~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~--------I~~~l~ 68 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDD-----WVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQGVTPED--------IRDALR 68 (234)
T ss_pred EEEEeCCCCccCCccHH-----HHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcCCCHHH--------HHHHHH
Confidence 58999999999875332 2233444433222222 222122334444444443211 22222 233445
Q ss_pred cCCCCchHHHHHHHH--HHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCC-----------------CCCCC
Q 016755 89 KVKALPGANRLIKHL--SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV-----------------RTGKP 149 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L--~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~-----------------~~~kp 149 (383)
.+++.||..++++.+ +..|+.+.|+|.+..-+++.+| +..|+...|+.|++..-. ...-|
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL-~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETIL-EHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHH-HhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence 788999999999999 4579999999999999999999 889999999888764210 01011
Q ss_pred ---ChHHHHHHHHH---cCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 150 ---SPDIFLEAAKR---LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 150 ---~p~~~~~~~~~---lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
|...+...++. -|+.-.+++||||+.||+.++.+.+-.=+++++
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R 197 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPR 197 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecC
Confidence 45566666665 367789999999999999999988776555555
No 101
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.26 E-value=1.4e-11 Score=122.18 Aligned_cols=92 Identities=22% Similarity=0.317 Sum_probs=79.7
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCCh------------HHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHR------------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~------------~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
++||+.+.|+.|++.|++++|+||... ..+...+ +.+|+. |+.+++..+..+.||+|+++..+++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL-~~lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIV-AKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHH-HHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 689999999999999999999999776 3455666 677774 7888888888889999999999999
Q ss_pred HcC----CCCCcEEEEecChhhhHHHHhcCC
Q 016755 160 RLN----MEPSSSLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 160 ~lg----~~p~e~l~VGDs~~Di~~a~~aG~ 186 (383)
+++ +++++++||||+..|+.+++++|.
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 985 899999999999999888777765
No 102
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.24 E-value=2.7e-10 Score=101.00 Aligned_cols=100 Identities=13% Similarity=0.073 Sum_probs=70.0
Q ss_pred cCCCCchHHHHHH-HHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC-CC---C-------CCCCChHHHHH
Q 016755 89 KVKALPGANRLIK-HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-EV---R-------TGKPSPDIFLE 156 (383)
Q Consensus 89 ~~~~~pg~~~lL~-~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~-~~---~-------~~kp~p~~~~~ 156 (383)
...++||+.++|+ .++++|++++|+|+++...++... +..++..- +.++++. ++ + .|..|...++.
T Consensus 92 ~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia-~~~~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~ 169 (210)
T TIGR01545 92 KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVY-FDSNFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLEQ 169 (210)
T ss_pred hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHH-Hhcccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHHH
Confidence 3468999999996 788899999999999999888777 55443221 3344332 11 1 12223333433
Q ss_pred HHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 157 ~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
.++.+...+.+.|||.+|+.+.+.+|.+.++-+.
T Consensus 170 ---~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~ 203 (210)
T TIGR01545 170 ---KIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKR 203 (210)
T ss_pred ---HhCCChhheEEecCCcccHHHHHhCCCcEEECcc
Confidence 3455667889999999999999999998866544
No 103
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.24 E-value=1.7e-11 Score=90.19 Aligned_cols=68 Identities=32% Similarity=0.496 Sum_probs=60.3
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecC-hhhhHHHHhcCCEEEEecCCCCcccc----ccccchhhccccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLD 213 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs-~~Di~~a~~aG~~~i~v~~~~~~~~~----~~~a~~vi~~l~e 213 (383)
++||+|.++..+++++++++++|++|||+ ..|+.+|+++|+.+++|.++...... ...+++++++|.|
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 58999999999999999999999999999 79999999999999999997655433 2477889988876
No 104
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.23 E-value=7.4e-10 Score=91.93 Aligned_cols=104 Identities=17% Similarity=0.175 Sum_probs=83.1
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHH--HhhcCCcccCcEEEeCCCCCC-CCCChHHHHHHHHHcCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI--SYQHGWNESFSVIVGSDEVRT-GKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l--~~~~gl~~~f~~i~~~~~~~~-~kp~p~~~~~~~~~lg~~p 165 (383)
...++|++.+.+++.++.|++++|.|.+.-....-.+ .....+..+|+..+-. .. .|-...-|..+++..|++|
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt---tiG~KrE~~SY~kIa~~iGl~p 177 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT---TIGKKRESQSYAKIAGDIGLPP 177 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec---cccccccchhHHHHHHhcCCCc
Confidence 5679999999999999999999999998876555444 1233455556655433 32 3556778999999999999
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
.+++++.|.+..+.+|+.+|+.++.+.+..
T Consensus 178 ~eilFLSDn~~EL~AA~~vGl~t~l~~R~g 207 (229)
T COG4229 178 AEILFLSDNPEELKAAAGVGLATGLAVRPG 207 (229)
T ss_pred hheEEecCCHHHHHHHHhcchheeeeecCC
Confidence 999999999999999999999999887743
No 105
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.16 E-value=9.2e-10 Score=104.15 Aligned_cols=70 Identities=14% Similarity=0.125 Sum_probs=55.4
Q ss_pred CCCCCChHHHHHHHHHc--------CC-----CCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCcccc---ccccchh
Q 016755 145 RTGKPSPDIFLEAAKRL--------NM-----EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR---YTAADEV 207 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~l--------g~-----~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~---~~~a~~v 207 (383)
..|||++.+|..+++.+ +. ++++++||||++ +|+.+|+++|+.+++|.++...... ...++++
T Consensus 230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v 309 (321)
T TIGR01456 230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI 309 (321)
T ss_pred EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence 36999999999998887 43 457999999999 8999999999999999887332221 2246788
Q ss_pred hcccccc
Q 016755 208 INSLLDL 214 (383)
Q Consensus 208 i~~l~e~ 214 (383)
++++.++
T Consensus 310 v~~l~e~ 316 (321)
T TIGR01456 310 VNDVFDA 316 (321)
T ss_pred ECCHHHH
Confidence 8888764
No 106
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.12 E-value=6.9e-10 Score=93.23 Aligned_cols=160 Identities=16% Similarity=0.148 Sum_probs=99.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh-hhcCC--CHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGK--TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (383)
..++|+||+|-|++..+. +.+++...|..-...... +.++. ..++.+..-+..+.. ...++ ....
T Consensus 15 ~~~aVcFDvDSTvi~eEg-----IdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp--~~~qv----~~~v- 82 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQEEG-----IDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQP--LQVQV----EQFV- 82 (227)
T ss_pred hcCeEEEecCcchhHHhh-----HHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcc--cHHHH----HHHH-
Confidence 468999999999986543 333333445433322222 22221 233333332222211 11111 1111
Q ss_pred hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc--cCc--------EEEeCCCC----CCCCCC
Q 016755 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SFS--------VIVGSDEV----RTGKPS 150 (383)
Q Consensus 85 ~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~--~f~--------~i~~~~~~----~~~kp~ 150 (383)
.....++.||++++...|+++|..++++|++...++..+- ..+|+.. .+. .-+.+.+. ..+-.+
T Consensus 83 -~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va-~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggK 160 (227)
T KOG1615|consen 83 -IKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVA-EQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGK 160 (227)
T ss_pred -hcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH-HHhCCcHhhhhhheeeeccCCcccccccCCccccCCcc
Confidence 1135788999999999999999999999999999988776 6777753 221 11222221 133456
Q ss_pred hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHh
Q 016755 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183 (383)
Q Consensus 151 p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~ 183 (383)
++.+..+.+ +.+-..++||||+.+|++|...
T Consensus 161 a~~i~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 161 AEVIALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHHHHHh--CCChheeEEecCCccccccCCc
Confidence 778877766 8888999999999999999877
No 107
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.08 E-value=7.7e-11 Score=106.23 Aligned_cols=63 Identities=21% Similarity=0.189 Sum_probs=48.8
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~ 210 (383)
..+..|+.+++.+++++|++++++++|||+.||+.|++.+|+.+++-+. .+.....++++..+
T Consensus 153 ~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na---~~~vk~~a~~v~~~ 215 (230)
T PRK01158 153 SPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANA---DEELKEAADYVTEK 215 (230)
T ss_pred eCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCc---cHHHHHhcceEecC
Confidence 3566789999999999999999999999999999999999997755432 22333344555543
No 108
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.03 E-value=2e-10 Score=104.45 Aligned_cols=98 Identities=23% Similarity=0.388 Sum_probs=81.4
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEE--EeCCCCCCCCCChHHHHHHHHHcCCC-CCcEE
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI--VGSDEVRTGKPSPDIFLEAAKRLNME-PSSSL 169 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i--~~~~~~~~~kp~p~~~~~~~~~lg~~-p~e~l 169 (383)
++++.++++.+.++|+++ ++||.+..+....+ ..++...+|..+ ++++....+||+|.++..++++++.. +++|+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~-~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGI-YRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCc-eEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 689999999998899997 88998877665444 566666666654 56666568999999999999999975 67899
Q ss_pred EEecCh-hhhHHHHhcCCEEEEec
Q 016755 170 VIEDSV-IGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 170 ~VGDs~-~Di~~a~~aG~~~i~v~ 192 (383)
||||+. +|+.+|+++|+.+++|.
T Consensus 218 ~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred EECCCcHHHHHHHHHCCCeEEEEe
Confidence 999995 99999999999999875
No 109
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.02 E-value=1.5e-09 Score=91.98 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=71.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCCh-HHHHHHHHhhcCCc----------ccCcEEEeCCCCCCCCCChHHHHHH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHR-ATIESKISYQHGWN----------ESFSVIVGSDEVRTGKPSPDIFLEA 157 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~-~~i~~~l~~~~gl~----------~~f~~i~~~~~~~~~kp~p~~~~~~ 157 (383)
.+.++|++.++|++|+++|++++++|.++. +.....| +.+++. .+|+..-... + .+..-|+.+
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L-~~l~i~~~~~~~~~~~~~F~~~eI~~----g-sK~~Hf~~i 116 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL-KLLEIDDADGDGVPLIEYFDYLEIYP----G-SKTTHFRRI 116 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH-HHTT-C----------CCECEEEESS----S--HHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH-HhcCCCccccccccchhhcchhheec----C-chHHHHHHH
Confidence 578999999999999999999999996654 4566666 788888 6666643332 2 677899999
Q ss_pred HHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 158 ~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
.+..|++.+++++|.|...++....+.|+.++.++.|-.
T Consensus 117 ~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt 155 (169)
T PF12689_consen 117 HRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLT 155 (169)
T ss_dssp HHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--
T ss_pred HHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCC
Confidence 999999999999999999999999999999999998643
No 110
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.01 E-value=3.6e-09 Score=92.33 Aligned_cols=85 Identities=21% Similarity=0.386 Sum_probs=63.3
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCC----------C---CChHHHHHH---
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------K---PSPDIFLEA--- 157 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~----------k---p~p~~~~~~--- 157 (383)
|++.++++.++++|++++|+|.++...++..+ +.+|+... .+++..-...+ . .|...++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~-~~~~i~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIA-ERLGIDDD--NVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHH-HHTTSSEG--GEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCCce--EEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 66669999999999999999999999999888 77887542 13322221000 0 256666666
Q ss_pred HHHcCCCCCcEEEEecChhhhHHHH
Q 016755 158 AKRLNMEPSSSLVIEDSVIGVVAGK 182 (383)
Q Consensus 158 ~~~lg~~p~e~l~VGDs~~Di~~a~ 182 (383)
... +.+...+++||||.+|+.+++
T Consensus 169 ~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHH-THTCCEEEEEESSGGGHHHHH
T ss_pred hhc-CCCCCeEEEEECCHHHHHHhC
Confidence 444 889999999999999999975
No 111
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.99 E-value=2.9e-10 Score=102.05 Aligned_cols=95 Identities=19% Similarity=0.171 Sum_probs=61.3
Q ss_pred EEEEeCCChHHHHHHHHhhcCCcccCcEE---EeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCC
Q 016755 110 MALASNSHRATIESKISYQHGWNESFSVI---VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 110 ~~i~s~~~~~~i~~~l~~~~gl~~~f~~i---~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~ 186 (383)
..+.+....+.+...+ +.++... ... ...+-...+.+|+.++..+++++|++++++++|||+.||+.|++.+|+
T Consensus 110 ~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~ 186 (225)
T TIGR01482 110 VKMRYGIDVDTVREII-KELGLNL--VAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGF 186 (225)
T ss_pred EEEeecCCHHHHHHHH-HhcCceE--EEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCc
Confidence 3444444555555555 5554321 111 111223456788899999999999999999999999999999999999
Q ss_pred EEEEecCCCCccccccccchhhcc
Q 016755 187 EVVAVPSLPKQTHRYTAADEVINS 210 (383)
Q Consensus 187 ~~i~v~~~~~~~~~~~~a~~vi~~ 210 (383)
.+++-+. .+.....++.+..+
T Consensus 187 ~vam~Na---~~~~k~~A~~vt~~ 207 (225)
T TIGR01482 187 GVAVANA---QPELKEWADYVTES 207 (225)
T ss_pred eEEcCCh---hHHHHHhcCeecCC
Confidence 7654432 23333344555543
No 112
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.99 E-value=9.2e-10 Score=93.40 Aligned_cols=68 Identities=26% Similarity=0.401 Sum_probs=56.9
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChh-hhHHHHhcCCEEEEecCCCCccc---c-ccccchhhccccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTH---R-YTAADEVINSLLD 213 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~-Di~~a~~aG~~~i~v~~~~~~~~---~-~~~a~~vi~~l~e 213 (383)
.|||.|..|+.+++.+|++|++++||||..+ |+-.|++.||+.+.|.++...+. . ...|+...+++.+
T Consensus 179 vGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~ 251 (262)
T KOG3040|consen 179 VGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFAD 251 (262)
T ss_pred ecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHH
Confidence 6899999999999999999999999999995 89999999999999999754431 1 2345666776665
No 113
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=98.95 E-value=6.3e-09 Score=88.57 Aligned_cols=103 Identities=22% Similarity=0.327 Sum_probs=82.3
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCC---------------hHHHHHHHHhhcCCcccCcEEEeCC-----CCCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIVGSD-----EVRTGK 148 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~---------------~~~i~~~l~~~~gl~~~f~~i~~~~-----~~~~~k 148 (383)
.+.+.||+.+.+..|.+.||+++++||.. ...+...+ ...|. .|+.++... .+.++|
T Consensus 29 ~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l-~~~gv--~id~i~~Cph~p~~~c~cRK 105 (181)
T COG0241 29 DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKIL-ASQGV--KIDGILYCPHHPEDNCDCRK 105 (181)
T ss_pred HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcccC
Confidence 34688999999999999999999999952 12222333 33343 456666542 256889
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
|+|.++..+++++++++++.++|||...|+++|.++|+..+.+.++
T Consensus 106 P~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~ 151 (181)
T COG0241 106 PKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTG 151 (181)
T ss_pred CChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence 9999999999999999999999999999999999999997777664
No 114
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.95 E-value=2.6e-09 Score=97.14 Aligned_cols=90 Identities=20% Similarity=0.311 Sum_probs=75.2
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHH--HHHHhhcCCcc-cCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIE--SKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~--~~l~~~~gl~~-~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.++||+.++|++|+++|++++++||+++.... ..+ +.+|+.. +|+.|+++.+... ..+..++++++.++++
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L-~~~gl~~~~~~~Ii~s~~~~~-----~~l~~~~~~~~~~~~~ 97 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTL-KSLGINADLPEMIISSGEIAV-----QMILESKKRFDIRNGI 97 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHH-HHCCCCccccceEEccHHHHH-----HHHHhhhhhccCCCce
Confidence 46899999999999999999999999887655 566 7889987 8999998876542 4677777888999999
Q ss_pred EEEEecChhhhHHHHhcCC
Q 016755 168 SLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~ 186 (383)
|++|||+..|+......|.
T Consensus 98 ~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 98 IYLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEEeCCcccchhhhcCCCc
Confidence 9999999999887766554
No 115
>PTZ00445 p36-lilke protein; Provisional
Probab=98.90 E-value=1.3e-08 Score=87.78 Aligned_cols=101 Identities=15% Similarity=0.220 Sum_probs=82.1
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHH---------------HHHHHHhhcCCcccCcEEEeCCC-----------CC
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRAT---------------IESKISYQHGWNESFSVIVGSDE-----------VR 145 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---------------i~~~l~~~~gl~~~f~~i~~~~~-----------~~ 145 (383)
+.|....++.+|++.|++++|+|-+++.. ++..+ +..+..-..+.+++... .+
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~l-k~s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAAL-KKSKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHH-HhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence 67889999999999999999999987744 45555 44444433344554322 24
Q ss_pred CCCCChHH--H--HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 146 TGKPSPDI--F--LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 146 ~~kp~p~~--~--~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
..||+|+. | +.++++.|+.|++|++|+|+..++++|++.|+.++.+..
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 66999999 8 999999999999999999999999999999999999876
No 116
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.89 E-value=4.2e-08 Score=89.43 Aligned_cols=85 Identities=13% Similarity=0.190 Sum_probs=66.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCccc-CcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNES-FSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~-f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
...++||+.++++.|+++|++++++|+..... +...+ +.+|+... ++.++...+ .++++.....+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~L-kk~Gi~~~~~d~lllr~~---~~~K~~rr~~I~~~y~I- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNL-KRFGFPQADEEHLLLKKD---KSSKESRRQKVQKDYEI- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHH-HHcCcCCCCcceEEeCCC---CCCcHHHHHHHHhcCCE-
Confidence 56789999999999999999999999987443 34556 67888653 466766643 35677888887777666
Q ss_pred CCcEEEEecChhhhHHH
Q 016755 165 PSSSLVIEDSVIGVVAG 181 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a 181 (383)
+++|||..+|+...
T Consensus 191 ---vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 ---VLLFGDNLLDFDDF 204 (266)
T ss_pred ---EEEECCCHHHhhhh
Confidence 99999999999653
No 117
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.89 E-value=7.7e-08 Score=80.30 Aligned_cols=156 Identities=17% Similarity=0.199 Sum_probs=96.3
Q ss_pred EEEEecCCcccc--cHHHHHHHHHHHHHHcCCCCChhhhhhhc--CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 016755 11 CVILDLDGTLLN--TDGMFSEVLKTFLVKYGKEWDGREKHKIV--GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (383)
Q Consensus 11 ~viFDlDGTL~d--~~~~~~~a~~~~~~~~g~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (383)
.|+.|+|||+.- +...+.. .+|.+--.......+ ..+.++.+.+++...+.+ .+++. .-.
T Consensus 5 vi~sDFDGTITl~Ds~~~itd-------tf~~~e~k~l~~~vls~tiS~rd~~g~mf~~i~~s--~~Eil-------e~l 68 (220)
T COG4359 5 VIFSDFDGTITLNDSNDYITD-------TFGPGEWKALKDGVLSKTISFRDGFGRMFGSIHSS--LEEIL-------EFL 68 (220)
T ss_pred EEEecCCCceEecchhHHHHh-------ccCchHHHHHHHHHhhCceeHHHHHHHHHHhcCCC--HHHHH-------HHH
Confidence 356699999983 3322222 233221111221111 225566666666665544 22222 222
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc------cC----------cEEEeCCCCCCCCCC
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE------SF----------SVIVGSDEVRTGKPS 150 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~------~f----------~~i~~~~~~~~~kp~ 150 (383)
...+.+.||..+++++++++++++.++|.+-..++..++....|-.. ++ ..++..++-.+|.-+
T Consensus 69 lk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK 148 (220)
T COG4359 69 LKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDK 148 (220)
T ss_pred HhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCc
Confidence 23578999999999999999999999999999999988833222111 11 123333444566556
Q ss_pred hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCC
Q 016755 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 151 p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~ 186 (383)
+..++. +.-+++.++|.||+..|+.+|+....
T Consensus 149 ~~vI~~----l~e~~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 149 SSVIHE----LSEPNESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred chhHHH----hhcCCceEEEecCCcccccHhhhhhh
Confidence 555554 34466779999999999999988755
No 118
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.87 E-value=8.2e-09 Score=93.11 Aligned_cols=70 Identities=27% Similarity=0.367 Sum_probs=57.6
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCcccc--------ccccchhhcccccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR--------YTAADEVINSLLDL 214 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~--------~~~a~~vi~~l~e~ 214 (383)
-.|||.+.++..++++.+++|++|+||||+. .||..+++.|++++++-.+....+. .-.|+++++++.++
T Consensus 221 v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~ 299 (306)
T KOG2882|consen 221 VLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDL 299 (306)
T ss_pred ecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHH
Confidence 3789999999999999999999999999999 6999999999999999887542211 22467777777664
No 119
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.86 E-value=1.1e-08 Score=86.53 Aligned_cols=93 Identities=20% Similarity=0.310 Sum_probs=65.5
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCC---h-----------HHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHH
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSH---R-----------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~---~-----------~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~ 158 (383)
.|++.+.|++|.+.||.++|+||.. . ..+...+ +.+++. +...++...-.++||.+.++..++
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il-~~l~ip--~~~~~a~~~d~~RKP~~GM~~~~~ 107 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENIL-KELGIP--IQVYAAPHKDPCRKPNPGMWEFAL 107 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHH-HHCTS---EEEEECGCSSTTSTTSSHHHHHHC
T ss_pred chhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHH-HHcCCc--eEEEecCCCCCCCCCchhHHHHHH
Confidence 3579999999999999999999962 1 1122233 455554 234444444478999999999999
Q ss_pred HHcCC----CCCcEEEEecC-----------hhhhHHHHhcCCEE
Q 016755 159 KRLNM----EPSSSLVIEDS-----------VIGVVAGKAAGMEV 188 (383)
Q Consensus 159 ~~lg~----~p~e~l~VGDs-----------~~Di~~a~~aG~~~ 188 (383)
+.++. +.++++||||. -.|...|.++|++.
T Consensus 108 ~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 108 KDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp CCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred HhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 98874 89999999996 57899999999975
No 120
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.86 E-value=9.1e-09 Score=91.77 Aligned_cols=96 Identities=16% Similarity=0.111 Sum_probs=62.0
Q ss_pred EEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 111 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 111 ~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
.+.+......+...+ +..++..+... ..-+-...+..+..+++.+++++|++++++++|||+.||++|++.+|+.+++
T Consensus 111 ~~~~~~~~~~~~~~l-~~~~~~~~~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam 188 (215)
T TIGR01487 111 IMREGKDVDEVREII-KERGLNLVDSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV 188 (215)
T ss_pred EecCCccHHHHHHHH-HhCCeEEEecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc
Confidence 344554555556566 44554322110 0111123456678899999999999999999999999999999999997665
Q ss_pred ecCCCCccccccccchhhccc
Q 016755 191 VPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 191 v~~~~~~~~~~~~a~~vi~~l 211 (383)
-+. .+.....++++..+-
T Consensus 189 ~na---~~~~k~~A~~v~~~~ 206 (215)
T TIGR01487 189 ANA---DDQLKEIADYVTSNP 206 (215)
T ss_pred CCc---cHHHHHhCCEEcCCC
Confidence 533 333334455555543
No 121
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.81 E-value=5e-08 Score=90.31 Aligned_cols=47 Identities=15% Similarity=0.066 Sum_probs=41.8
Q ss_pred CCCCChHHHHHHHHHcCCCC-CcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 146 TGKPSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p-~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
.+ .+...++.+++++|+++ +++++|||+.||+.|++.+|+.+++-+.
T Consensus 188 ~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA 235 (273)
T PRK00192 188 GG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGP 235 (273)
T ss_pred CC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCC
Confidence 44 56778999999999999 9999999999999999999998877654
No 122
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.80 E-value=7.3e-08 Score=81.33 Aligned_cols=87 Identities=25% Similarity=0.287 Sum_probs=59.7
Q ss_pred HHHHHHHHHCCC--CEEEEeCCC-------hHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC----
Q 016755 97 NRLIKHLSCHGV--PMALASNSH-------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM---- 163 (383)
Q Consensus 97 ~~lL~~L~~~G~--~~~i~s~~~-------~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~---- 163 (383)
.+.++++++.+. +++|+||+. ...++. +.+.+|+ ..+.. ...|| ..+..+++.++.
T Consensus 65 ~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~-~~~~lgI----pvl~h----~~kKP--~~~~~i~~~~~~~~~~ 133 (168)
T PF09419_consen 65 AEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA-LEKALGI----PVLRH----RAKKP--GCFREILKYFKCQKVV 133 (168)
T ss_pred HHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH-HHHhhCC----cEEEe----CCCCC--ccHHHHHHHHhhccCC
Confidence 344555556554 499999984 333333 3366665 22221 13455 666667666654
Q ss_pred -CCCcEEEEecCh-hhhHHHHhcCCEEEEecCC
Q 016755 164 -EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 164 -~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~ 194 (383)
.|+++++|||.. +|+.+|..+|+.++++..+
T Consensus 134 ~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 134 TSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred CCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 499999999999 8999999999999999875
No 123
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.79 E-value=1.2e-08 Score=83.13 Aligned_cols=84 Identities=19% Similarity=0.305 Sum_probs=70.3
Q ss_pred HHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 016755 100 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179 (383)
Q Consensus 100 L~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~ 179 (383)
++.|.+.|++++|+|+.....++... +.+|+. +++-|. +.+-..+.++++++++.+++|.|+||..+|+.
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra-~~LGI~----~~~qG~-----~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlp 113 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRA-KDLGIK----HLYQGI-----SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLP 113 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHH-HHcCCc----eeeech-----HhHHHHHHHHHHHhCCCHHHhhhhcCccccHH
Confidence 45566789999999999999999888 788984 444332 34568999999999999999999999999999
Q ss_pred HHHhcCCEEEEecC
Q 016755 180 AGKAAGMEVVAVPS 193 (383)
Q Consensus 180 ~a~~aG~~~i~v~~ 193 (383)
..++.|.+++..+.
T Consensus 114 vm~~vGls~a~~dA 127 (170)
T COG1778 114 VMEKVGLSVAVADA 127 (170)
T ss_pred HHHHcCCccccccc
Confidence 99999998765443
No 124
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.77 E-value=1.7e-08 Score=93.03 Aligned_cols=49 Identities=18% Similarity=0.159 Sum_probs=43.0
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
..+..|..+++.+++++|++++++++|||+.||++|.+.+|..+++-+.
T Consensus 185 ~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na 233 (264)
T COG0561 185 PKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA 233 (264)
T ss_pred cCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC
Confidence 3566788999999999999999999999999999999999997665443
No 125
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.76 E-value=1.5e-07 Score=80.90 Aligned_cols=172 Identities=16% Similarity=0.104 Sum_probs=103.1
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhh-hcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (383)
+-.+++||+|-|++|.+.. ..+...++.......+.. +-.....+...++++.++-. ...++ ...
T Consensus 12 ~ril~~FDFD~TIid~dSD-----~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~--------ik~ 78 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSD-----NWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAE--------IKQ 78 (256)
T ss_pred CcEEEEEecCceeecCCcc-----hHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHH--------HHH
Confidence 3447899999999987422 112223332222112211 11112333444444444321 12222 223
Q ss_pred hhccCCCCchHHHHHHHHHHCCC-CEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----------CC-------
Q 016755 86 HLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------TG------- 147 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~-~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----------~~------- 147 (383)
.+..++..||+.++++.+++.|. .+.|+|.+..-|++.+| +.+|+.+.|..|++..... +-
T Consensus 79 ~~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~L-ea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~ 157 (256)
T KOG3120|consen 79 VLRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEIL-EAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNL 157 (256)
T ss_pred HHhcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHH-HHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCc
Confidence 34467899999999999999984 99999999999999999 8899999888777542110 00
Q ss_pred CC----ChHHHHHHHH---HcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 148 KP----SPDIFLEAAK---RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 148 kp----~p~~~~~~~~---~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
=| +...+.+... +-|+.-++.+||||+.||+.+.......-++.++
T Consensus 158 CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampR 210 (256)
T KOG3120|consen 158 CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPR 210 (256)
T ss_pred CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceeccc
Confidence 01 2223333322 3467788999999999998776555443333333
No 126
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.74 E-value=2.8e-07 Score=82.45 Aligned_cols=45 Identities=13% Similarity=-0.017 Sum_probs=39.9
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
.+-.++.+++.+++++|+++++|++|||+.||+.|.+.+|..+++
T Consensus 176 ~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 176 ASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 344467789999999999999999999999999999999997754
No 127
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.73 E-value=1e-08 Score=94.92 Aligned_cols=47 Identities=9% Similarity=0.068 Sum_probs=41.9
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
..+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-
T Consensus 184 ~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~ 230 (272)
T PRK15126 184 PVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG 230 (272)
T ss_pred cCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc
Confidence 35566889999999999999999999999999999999999966544
No 128
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.69 E-value=5.6e-08 Score=88.47 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=54.8
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHH
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF 154 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~ 154 (383)
||+.++|++|+++|++++++|++.++.+...+ +.+|+..+|+.++++++....||+|+..
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L-~~lGLd~YFdvIIs~Gdv~~~kp~~e~~ 208 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESM-RKVKLDRYFDIIISGGHKAEEYSTMSTE 208 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH-HHcCCCcccCEEEECCccccCCCCcccc
Confidence 78899999999999999999999999999888 8899999999999999998888887543
No 129
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.67 E-value=1.2e-07 Score=87.63 Aligned_cols=65 Identities=18% Similarity=0.095 Sum_probs=51.2
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~ 212 (383)
..+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-+ ..+.....|+++..+-.
T Consensus 192 ~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N---A~~~vK~~A~~vt~~n~ 256 (270)
T PRK10513 192 DKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGN---AIPSVKEVAQFVTKSNL 256 (270)
T ss_pred CCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecC---ccHHHHHhcCeeccCCC
Confidence 456778899999999999999999999999999999999999665543 33444445566665543
No 130
>PRK10976 putative hydrolase; Provisional
Probab=98.59 E-value=1.5e-07 Score=86.77 Aligned_cols=48 Identities=15% Similarity=0.118 Sum_probs=42.5
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
..+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-+
T Consensus 186 ~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~N 233 (266)
T PRK10976 186 AGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGN 233 (266)
T ss_pred cCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecC
Confidence 356668899999999999999999999999999999999999665543
No 131
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.58 E-value=2.2e-07 Score=84.07 Aligned_cols=48 Identities=15% Similarity=-0.026 Sum_probs=43.2
Q ss_pred CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 143 ~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
-...+.+|+.+++.+++++|++++++++|||+.||+.|++.+|..+++
T Consensus 153 i~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 153 VLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred EeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 345678999999999999999999999999999999999999987654
No 132
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.58 E-value=8.7e-08 Score=88.62 Aligned_cols=48 Identities=8% Similarity=-0.084 Sum_probs=43.2
Q ss_pred CCCCCChHHHHHHHHHcCC---CCCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 145 RTGKPSPDIFLEAAKRLNM---EPSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~---~p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
..+-.|..+++.+++.+|+ +++++++|||+.||++|.+.+|+.+++-+
T Consensus 183 ~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~ 233 (271)
T PRK03669 183 DASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKG 233 (271)
T ss_pred cCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecC
Confidence 4567788999999999999 99999999999999999999999777654
No 133
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.57 E-value=4.4e-08 Score=83.19 Aligned_cols=100 Identities=8% Similarity=0.055 Sum_probs=86.3
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-cCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~-~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.+...||+.++|+.|.+. +.++|.|++.+.+++..+ +.++... +|+.+++.+++...+|+ +.+.+..+|.++++
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il-~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~ 114 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVL-DILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSK 114 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHH-HHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhh
Confidence 356789999999999987 999999999999999988 7788765 88999998887766665 66778889999999
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecC
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
|++|||++.++.++.++|+.+.....
T Consensus 115 vIiVDD~~~~~~~~~~NgI~i~~f~~ 140 (162)
T TIGR02251 115 VIIIDNSPYSYSLQPDNAIPIKSWFG 140 (162)
T ss_pred EEEEeCChhhhccCccCEeecCCCCC
Confidence 99999999999999999987665553
No 134
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.56 E-value=1.6e-07 Score=95.60 Aligned_cols=106 Identities=21% Similarity=0.225 Sum_probs=77.7
Q ss_pred cCCCCchHHHHHHHHHHCC-CCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G-~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
...++||+.++++.|+++| ++++++|+.+...++..+ +.+|+..+|..+ .|+.-..++++++..+++
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~-~~lgi~~~f~~~-----------~p~~K~~~v~~l~~~~~~ 449 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA-AELGIDEVHAEL-----------LPEDKLAIVKELQEEGGV 449 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHH-HHhCCCeeeccC-----------CHHHHHHHHHHHHHcCCE
Confidence 3679999999999999999 999999999999888888 889996655432 112223455555557789
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhc
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~ 209 (383)
|+||||+.||+.+++++|+ .+.++...+.....++.++.
T Consensus 450 v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~Ad~vi~ 488 (556)
T TIGR01525 450 VAMVGDGINDAPALAAADV---GIAMGAGSDVAIEAADIVLL 488 (556)
T ss_pred EEEEECChhHHHHHhhCCE---eEEeCCCCHHHHHhCCEEEe
Confidence 9999999999999999995 44443222222234555554
No 135
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.56 E-value=1.9e-07 Score=81.62 Aligned_cols=166 Identities=16% Similarity=0.241 Sum_probs=88.5
Q ss_pred EEEecCCcccccHHHHHHHHHHHHHHcCCC--CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH--hhh
Q 016755 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS--DHL 87 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~~~~~~~~g~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 87 (383)
|.+||||||.|....+...+.+ .++.. ++.+.... .-..+.+ .... .+....+...+. ..+
T Consensus 5 I~iDiDgVLad~~~~~~~~~n~---~~~~~~~~~~~~~~~---~~~~~~~----g~~~-----~e~~~~~~~~~~~~~~f 69 (191)
T PF06941_consen 5 IAIDIDGVLADFNSAFIEWFNE---EFGKNPELTPEDITG---YWDWEKW----GITE-----PEFYEKLWRFYEEPGFF 69 (191)
T ss_dssp EEEESBTTTB-HHHHHHHHHHH---HTTTS----GGGGTS---SSHHHHH----HHHS-----TTHHHHHHHHHTSTTTT
T ss_pred EEEECCCCCcccHHHHHHHHHH---HcCCCCCCCHHHhhh---hhHHHHh----CCCC-----HHHHHHHHHHHhChhhh
Confidence 8899999999997665554443 45555 43333221 1111111 0000 111222222222 234
Q ss_pred ccCCCCchHHHHHHHHHHCCCCEEEEeCCChH-------HHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHH
Q 016755 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRA-------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 88 ~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~-------~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~ 160 (383)
...+|.||+.++|+.|.+.|+.+.++|..+.. ...+.+.+++|...+-+.+++++ |. .
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~-----K~----------~ 134 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD-----KT----------L 134 (191)
T ss_dssp TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS-----GG----------G
T ss_pred cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC-----CC----------e
Confidence 67899999999999999999777777776543 23345545555333324444432 21 1
Q ss_pred cCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 161 lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
++. -++|+|++..+..+...|+++++++..+..... .-.++.++.|+
T Consensus 135 v~~----DvlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~ei 181 (191)
T PF06941_consen 135 VGG----DVLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEEI 181 (191)
T ss_dssp C------SEEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTSH
T ss_pred Eec----cEEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHHH
Confidence 222 289999999999999999999999885543332 24566777663
No 136
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.55 E-value=1.8e-06 Score=78.83 Aligned_cols=51 Identities=24% Similarity=0.218 Sum_probs=44.1
Q ss_pred CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 143 ~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
....+.++..+++.+++++|+++++|++|||+.||+.|++.++...+.+..
T Consensus 161 i~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 161 ILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred EEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence 345788999999999999999999999999999999999996655556654
No 137
>PLN02887 hydrolase family protein
Probab=98.55 E-value=1.3e-07 Score=95.45 Aligned_cols=65 Identities=15% Similarity=0.068 Sum_probs=50.8
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~ 212 (383)
..+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-+ ..+.....|+++..+-.
T Consensus 503 p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgN---A~eeVK~~Ad~VT~sNd 567 (580)
T PLN02887 503 PPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSN---GAEKTKAVADVIGVSND 567 (580)
T ss_pred cCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCC---CCHHHHHhCCEEeCCCC
Confidence 456678899999999999999999999999999999999999665543 33344445566665443
No 138
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.53 E-value=9.9e-08 Score=87.45 Aligned_cols=64 Identities=19% Similarity=0.147 Sum_probs=49.4
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
..+..|..+++.+++++|++++++++|||+.||+.|++.+|+.+++-+ ..+.....++.+..+-
T Consensus 184 ~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~n---a~~~~k~~a~~~~~~n 247 (256)
T TIGR00099 184 AKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGN---ADEELKALADYVTDSN 247 (256)
T ss_pred CCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecC---chHHHHHhCCEEecCC
Confidence 356668899999999999999999999999999999999999766642 2223333445555543
No 139
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme. FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.
Probab=98.52 E-value=3.1e-07 Score=79.45 Aligned_cols=112 Identities=25% Similarity=0.330 Sum_probs=78.2
Q ss_pred HHHHHHHHHHCCCCEEEEe--------CCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCC---ChHHHHHHHHHcCCC
Q 016755 96 ANRLIKHLSCHGVPMALAS--------NSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP---SPDIFLEAAKRLNME 164 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~s--------~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp---~p~~~~~~~~~lg~~ 164 (383)
..+-++.+++.|+...++- .++++|++..+ ...+. +.+++|+|+.+|+. +.+.++..
T Consensus 58 ~e~R~~~l~~l~vd~v~~~~f~~~~~~~s~~~Fi~~il-~~~~~----~~ivvG~Df~FG~~~~g~~~~L~~~------- 125 (180)
T cd02064 58 LEEKLELLESLGVDYLLVLPFDKEFASLSAEEFVEDLL-VKLNA----KHVVVGFDFRFGKGRSGDAELLKEL------- 125 (180)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCHHHHcCCHHHHHHHHH-hhcCC----eEEEEccCCCCCCCCCCCHHHHHHh-------
Confidence 3555666777777666542 25666777666 22233 88999999998864 34444433
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeee
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVV 244 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~ 244 (383)
++..|+.++.++....+.... +++.+++.+.+++... |+.+||+||+++|+|+
T Consensus 126 ----------------~~~~g~~v~~v~~~~~~~~~i-SST~IR~~i~~G~i~~----------an~lLg~~y~~~g~V~ 178 (180)
T cd02064 126 ----------------GKKYGFEVTVVPPVTLDGERV-SSTRIREALAEGDVEL----------ANELLGRPYSIEGRVV 178 (180)
T ss_pred ----------------hhhcCcEEEEeCcEecCCcEE-cHHHHHHHHHhCCHHH----------HHHHcCCCcEEEEEEe
Confidence 456788888888754333333 5477777777787775 9999999999999999
Q ss_pred ec
Q 016755 245 KG 246 (383)
Q Consensus 245 ~G 246 (383)
||
T Consensus 179 ~G 180 (180)
T cd02064 179 HG 180 (180)
T ss_pred eC
Confidence 98
No 140
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.49 E-value=2.7e-07 Score=93.49 Aligned_cols=111 Identities=22% Similarity=0.257 Sum_probs=81.5
Q ss_pred cCCCCchHHHHHHHHHHCCC-CEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~-~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
...++||+.++++.|+++|+ +++++|+.+....+..+ +.+|+..+|..+. | +.-..++++++..+++
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~-~~lgi~~~f~~~~---------p--~~K~~~i~~l~~~~~~ 427 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVA-RELGIDEVHAELL---------P--EDKLEIVKELREKYGP 427 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHH-HHcCChhhhhccC---------c--HHHHHHHHHHHhcCCE
Confidence 35689999999999999999 99999999999888888 8899976654321 1 2224456666667789
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCC-CCccccccccchhh--cccccc
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSL-PKQTHRYTAADEVI--NSLLDL 214 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~a~~vi--~~l~e~ 214 (383)
++||||+.||+.+++++|+ .+..+ ...+.....++.++ +++.++
T Consensus 428 v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 428 VAMVGDGINDAPALAAADV---GIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred EEEEeCCHHHHHHHHhCCE---EEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 9999999999999999997 44443 22222233456666 555553
No 141
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=98.40 E-value=9.7e-06 Score=79.32 Aligned_cols=105 Identities=20% Similarity=0.264 Sum_probs=71.1
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc--------CCcccCcEEEeCCCC-----------------
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDEV----------------- 144 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~--------gl~~~f~~i~~~~~~----------------- 144 (383)
+...|.+..+|+.|++.|.++.++||++-.++...+.-.+ .|.++||.|++...-
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 4456789999999999999999999999999888773222 477899999976320
Q ss_pred ---CCCC-------C---ChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhc-CCEEEEecCC
Q 016755 145 ---RTGK-------P---SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAA-GMEVVAVPSL 194 (383)
Q Consensus 145 ---~~~k-------p---~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~a-G~~~i~v~~~ 194 (383)
..++ + ...-...+++.+|+...++++|||+. .|+...+.. |++|+.|-+.
T Consensus 262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 0111 1 23446677788999999999999999 798877766 9999887653
No 142
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.37 E-value=4.2e-07 Score=81.55 Aligned_cols=44 Identities=9% Similarity=0.037 Sum_probs=37.3
Q ss_pred CCCChHHHHHHHHHcCC--CCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 147 GKPSPDIFLEAAKRLNM--EPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~--~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
+-.++.+++.+++.+++ ++.+|++|||+.||+.|.+.+|+.+++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 55567888888888866 677999999999999999999997653
No 143
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.27 E-value=2.1e-06 Score=87.47 Aligned_cols=87 Identities=16% Similarity=0.200 Sum_probs=67.9
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
..+++||+.++++.|+++|++++++|+.....++..+ +.+|+. ++. +- .+++++ .++++++.++++|
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia-~~lgi~-----~~~-~~--~p~~K~----~~v~~l~~~~~~v 469 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA-KELGIN-----VRA-EV--LPDDKA----ALIKELQEKGRVV 469 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHcCCc-----EEc-cC--ChHHHH----HHHHHHHHcCCEE
Confidence 3568999999999999999999999999999888888 788884 221 11 122333 3444555577899
Q ss_pred EEEecChhhhHHHHhcCCEE
Q 016755 169 LVIEDSVIGVVAGKAAGMEV 188 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~ 188 (383)
+||||+.||+.+++++|+.+
T Consensus 470 ~~VGDg~nD~~al~~A~vgi 489 (562)
T TIGR01511 470 AMVGDGINDAPALAQADVGI 489 (562)
T ss_pred EEEeCCCccHHHHhhCCEEE
Confidence 99999999999999999743
No 144
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.24 E-value=7.6e-06 Score=64.67 Aligned_cols=115 Identities=12% Similarity=0.180 Sum_probs=92.0
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
.-++++.+.+.+++|++. +.++++|+--..++.+.. +..|+.. +.++.+ .+++.-..+++.|+-+-+-|
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~la-e~~gi~~--~rv~a~-------a~~e~K~~ii~eLkk~~~k~ 96 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLA-EFVGIPV--ERVFAG-------ADPEMKAKIIRELKKRYEKV 96 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHH-HHcCCce--eeeecc-------cCHHHHHHHHHHhcCCCcEE
Confidence 467899999999999999 999999998888888777 6666532 333332 35677788889998888999
Q ss_pred EEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
+||||+.||+.+.+++...++.+............|+.++++..+.
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ 142 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEI 142 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHH
Confidence 9999999999999999998888876444444456778899888773
No 145
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.22 E-value=3.3e-06 Score=77.10 Aligned_cols=51 Identities=16% Similarity=0.217 Sum_probs=46.0
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~ 145 (383)
|++.++|++|+++|++++++|+++++.+...+ +.+|+..+|+.++++++..
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~L-e~lgL~~yFDvII~~g~i~ 201 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSL-KETKLEGYFDIIICGGRKA 201 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HHcCCCccccEEEECCCcc
Confidence 67889999999999999999999999998888 8899999999998887643
No 146
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.20 E-value=1.1e-06 Score=80.55 Aligned_cols=49 Identities=12% Similarity=0.007 Sum_probs=43.3
Q ss_pred CCCCCChHHHHHHHHHcCCC--CCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 145 RTGKPSPDIFLEAAKRLNME--PSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~--p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
..+..+...++.+++++|++ .+++++|||+.||+.|.+.+|..+++-+.
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 35567788899999999999 99999999999999999999998876554
No 147
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.17 E-value=5.7e-05 Score=67.18 Aligned_cols=101 Identities=15% Similarity=0.158 Sum_probs=64.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH-HcCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK-RLNME 164 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~-~lg~~ 164 (383)
..++.|++.++++.++++|+.+.++|+.++.. +...| ...|+..+ +.++....-...++ ...|+...+ ++--.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL-~~~G~~~~-~~LiLR~~~d~~~~-~~~yKs~~R~~l~~~ 194 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNL-INAGFTGW-KHLILRGLEDSNKT-VVTYKSEVRKSLMEE 194 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHH-HHcCCCCc-CeeeecCCCCCCch-HhHHHHHHHHHHHhC
Confidence 56889999999999999999999999999766 55566 56777654 56665432112232 122222221 22222
Q ss_pred CCc-EEEEecChhhhHHHHhcCCEEEEecC
Q 016755 165 PSS-SLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 165 p~e-~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
.-+ +..|||..+|+.+ ..+|.++.-+++
T Consensus 195 GYrIv~~iGDq~sDl~G-~~~~~RtFKLPN 223 (229)
T TIGR01675 195 GYRIWGNIGDQWSDLLG-SPPGRRTFKLPN 223 (229)
T ss_pred CceEEEEECCChHHhcC-CCccCceeeCCC
Confidence 223 5779999999965 355656655554
No 148
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.13 E-value=5e-06 Score=88.75 Aligned_cols=88 Identities=17% Similarity=0.175 Sum_probs=71.8
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-.+.|++.+.++.|++.|++++++|+......+... +.+|+..+ +..- .|+....++++++..+++++
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia-~~lgi~~~----~~~~-------~p~~K~~~i~~l~~~~~~v~ 716 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIA-KEAGIDEV----IAGV-------LPDGKAEAIKRLQSQGRQVA 716 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCCEE----EeCC-------CHHHHHHHHHHHhhcCCEEE
Confidence 467899999999999999999999999988888777 78888543 3221 13445567778888899999
Q ss_pred EEecChhhhHHHHhcCCEEE
Q 016755 170 VIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i 189 (383)
||||+.||+.+++.+|+.+.
T Consensus 717 ~vGDg~nD~~al~~Agvgia 736 (834)
T PRK10671 717 MVGDGINDAPALAQADVGIA 736 (834)
T ss_pred EEeCCHHHHHHHHhCCeeEE
Confidence 99999999999999999443
No 149
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=98.09 E-value=0.00015 Score=63.10 Aligned_cols=105 Identities=17% Similarity=0.149 Sum_probs=79.6
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCC-CCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG-KPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~-kp~p~~~~~~~~~lg~~p~e 167 (383)
....++++...++..+..|++++|.|.+.......+. .+.+-.+.-..+-+-.|...| |-....|..+.+.+|.++.+
T Consensus 121 k~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllf-g~s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s~~e 199 (254)
T KOG2630|consen 121 KAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLF-GYSDAGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKSPRE 199 (254)
T ss_pred cccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHH-cccCcchHHHHhhhhhhccccceehhHHHHHHHHHhCCChhh
Confidence 3578999999999999999999999998877665544 322222211222222334443 55678899999999999999
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
.++.-|-+.-..+|+.+|..+..+.+.
T Consensus 200 iLfLTd~~~Ea~aa~~aGl~a~l~~rP 226 (254)
T KOG2630|consen 200 ILFLTDVPREAAAARKAGLQAGLVSRP 226 (254)
T ss_pred eEEeccChHHHHHHHhcccceeeeecC
Confidence 999999999999999999988776553
No 150
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.09 E-value=3.6e-05 Score=64.93 Aligned_cols=92 Identities=14% Similarity=0.206 Sum_probs=58.0
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCChHHHH---HHHHhh-----cCCcccCcEEEeCCCCC---------CCCC---ChH
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHRATIE---SKISYQ-----HGWNESFSVIVGSDEVR---------TGKP---SPD 152 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~---~~l~~~-----~gl~~~f~~i~~~~~~~---------~~kp---~p~ 152 (383)
.|++.++++.++++|+++.++|+.+..... ..+ .. .++.. ..+++..... ..+| +.+
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l-~~~~~~~~~lp~--g~li~~~g~~~~~~~~e~i~~~~~~~K~~ 105 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYL-SQIKQDGHNLPH--GPVLLSPDRLFAALHREVISKKPEVFKIA 105 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHH-HHhhhccccCCC--ceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence 588999999999999999999999977664 455 33 12221 2444433211 1223 333
Q ss_pred HHHHHHHHcCCCCCc-EEEEecChhhhHHHHhcCCE
Q 016755 153 IFLEAAKRLNMEPSS-SLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 153 ~~~~~~~~lg~~p~e-~l~VGDs~~Di~~a~~aG~~ 187 (383)
.+..+.+.+.-.--. ++.+||+.+|+.+=+++|++
T Consensus 106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 106 CLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 444444433222223 34588889999999999995
No 151
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.07 E-value=8.7e-06 Score=87.29 Aligned_cols=98 Identities=20% Similarity=0.224 Sum_probs=81.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----------------CCCCChHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----------------~~kp~p~~~ 154 (383)
++.|++.++++.|++.|+++.++|+.......... +.+|+...++.++.+.+.. ++...|+-.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia-~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA-RRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence 67899999999999999999999999988888777 8889987777776665442 344677777
Q ss_pred HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEE
Q 016755 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 155 ~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i 189 (383)
..+.+.++...+.+.|+||+.||+.++++|++.+.
T Consensus 607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia 641 (884)
T TIGR01522 607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVA 641 (884)
T ss_pred HHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEe
Confidence 78888777777899999999999999999997443
No 152
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.99 E-value=2.5e-05 Score=71.07 Aligned_cols=47 Identities=21% Similarity=0.164 Sum_probs=37.8
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
.+-.|..+++.+++++++++++++++|||.||+.|. ..+...|+|.+
T Consensus 162 ~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 162 KGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp TT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred CCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 455578999999999999999999999999999999 66677777766
No 153
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.98 E-value=0.00018 Score=71.64 Aligned_cols=92 Identities=16% Similarity=0.093 Sum_probs=56.9
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC-C---C--CCC---C---C-hHHHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE-V---R--TGK---P---S-PDIFLEAA 158 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~-~---~--~~k---p---~-p~~~~~~~ 158 (383)
+.|.+.+ .++++|. .+++|.+++..++....+.+|+ +.+++.+- + + -|+ + . .+-...+.
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGi----d~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~ 182 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGA----DKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVL 182 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCC----CEEEecccEECcCCEEeeeecCCCCCccHHHHHHHH
Confidence 5555554 4456674 4999999999999888445787 55554431 1 0 011 1 0 11222222
Q ss_pred HHcCCCCCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 159 ~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
+.+|.+... ++.|||.+|..+.+.++-..++-+
T Consensus 183 ~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 183 KEFGDALPD-LGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred HHhCCCCce-EEEECCccHHHHHHhCCccEEeCC
Confidence 456654444 899999999999999997765543
No 154
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.92 E-value=1.8e-05 Score=80.20 Aligned_cols=47 Identities=6% Similarity=-0.020 Sum_probs=41.9
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEE--ecChhhhHHHHhcCCEEEEecC
Q 016755 147 GKPSPDIFLEAAKRLNMEPSSSLVI--EDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~p~e~l~V--GDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+-.|..+++.+++.+|++.++++.| ||+.||+.|.+.+|..+++-..
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 5667899999999999999999998 9999999999999998877444
No 155
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.90 E-value=0.00013 Score=66.95 Aligned_cols=44 Identities=16% Similarity=0.024 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHHHcCCC--CCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 147 GKPSPDIFLEAAKRLNME--PSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~--p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
+.++..+.+.+.+.+.-. +-.++.+|||+||+.|.+.+.+.+++
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 345566676666665543 55899999999999999999998876
No 156
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.87 E-value=4.9e-05 Score=60.10 Aligned_cols=85 Identities=16% Similarity=0.181 Sum_probs=63.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHc------C
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL------N 162 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~l------g 162 (383)
.+.++|.+.+++++++..|+-+..+|=+...-.-..| ..+++..+|+.++.-..- . +-.++-.+++++ .
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aL-ral~~~~yFhy~ViePhP--~--K~~ML~~llr~i~~er~~~ 113 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKAL-RALDLLQYFHYIVIEPHP--Y--KFLMLSQLLREINTERNQK 113 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHH-HHhchhhhEEEEEecCCC--h--hHHHHHHHHHHHHHhhccc
Confidence 4679999999999999999988888887777666677 788999999988753211 1 123444444443 4
Q ss_pred CCCCcEEEEecChhhh
Q 016755 163 MEPSSSLVIEDSVIGV 178 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di 178 (383)
+.|+++++++|..--+
T Consensus 114 ikP~~Ivy~DDR~iH~ 129 (164)
T COG4996 114 IKPSEIVYLDDRRIHF 129 (164)
T ss_pred cCcceEEEEecccccH
Confidence 7899999999987433
No 157
>PLN02382 probable sucrose-phosphatase
Probab=97.84 E-value=5.6e-05 Score=73.92 Aligned_cols=45 Identities=20% Similarity=0.161 Sum_probs=39.6
Q ss_pred CCCCChHHHHHHHHHc---CCCCCcEEEEecChhhhHHHHhcCC-EEEE
Q 016755 146 TGKPSPDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAGM-EVVA 190 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~l---g~~p~e~l~VGDs~~Di~~a~~aG~-~~i~ 190 (383)
.+-.|..+++.+++++ |+++++++++||+.||++|.+.+|. .+++
T Consensus 172 ~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam 220 (413)
T PLN02382 172 QGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV 220 (413)
T ss_pred CCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE
Confidence 4566789999999999 9999999999999999999999994 5544
No 158
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.83 E-value=4e-05 Score=68.84 Aligned_cols=99 Identities=18% Similarity=0.229 Sum_probs=61.0
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCC---CC-ChHHHHHHHHH-c
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTG---KP-SPDIFLEAAKR-L 161 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~---kp-~p~~~~~~~~~-l 161 (383)
..+.||+.++++.++++|+.+.++|+.++.. ....| ...|...+-..++-+...... .. +......+.++ +
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL-~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy 192 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNL-KKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGY 192 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHH-HHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHH-HHcCCCccchhccccccccccccccccchHHHHHHHHcCC
Confidence 3788999999999999999999999987664 33344 556765443334333332111 11 23333333333 2
Q ss_pred CCCCCcEEEEecChhhhHHHHhc---CCEEEEecC
Q 016755 162 NMEPSSSLVIEDSVIGVVAGKAA---GMEVVAVPS 193 (383)
Q Consensus 162 g~~p~e~l~VGDs~~Di~~a~~a---G~~~i~v~~ 193 (383)
.+ +++|||..+|+..++.. +.+++.++.
T Consensus 193 ~I----i~~iGD~~~D~~~~~~~~~~~~r~f~lPN 223 (229)
T PF03767_consen 193 RI----IANIGDQLSDFSGAKTAGARAERWFKLPN 223 (229)
T ss_dssp EE----EEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred cE----EEEeCCCHHHhhcccccccccceEEEcCC
Confidence 23 88899999999984433 345555544
No 159
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.75 E-value=0.00052 Score=62.27 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=62.5
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHH-HHHcCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA-AKRLNME 164 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~-~~~lg~~ 164 (383)
..++.|++.++++.+++.|+++.++|+..+.. ....| ...|...+ +.++....-...+...--++.. .+++--+
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence 56789999999999999999999999998654 33344 45676544 5555543221122121222211 1121112
Q ss_pred C-CcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 165 P-SSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 165 p-~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
. .=+..|||..+|+.+....+-++.-+++
T Consensus 221 GYrIv~~iGDq~sDl~G~~~g~~RtFKLPN 250 (275)
T TIGR01680 221 GYNIVGIIGDQWNDLKGEHRGAIRSFKLPN 250 (275)
T ss_pred CceEEEEECCCHHhccCCCccCcceecCCC
Confidence 2 2267799999999665533356666665
No 160
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.73 E-value=0.00012 Score=77.02 Aligned_cols=87 Identities=16% Similarity=0.144 Sum_probs=66.7
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-++.|++.+.++.|++.|++++++|+.......... +.+|+..++. -. |+--..++++++ .+..|+
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia-~~lgi~~~~~----------~~--p~~K~~~v~~l~-~~~~v~ 632 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIA-GELGIDFRAG----------LL--PEDKVKAVTELN-QHAPLA 632 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCeecC----------CC--HHHHHHHHHHHh-cCCCEE
Confidence 478899999999999999999999999988888777 8888842211 11 222333445555 346899
Q ss_pred EEecChhhhHHHHhcCCEEEE
Q 016755 170 VIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~ 190 (383)
||||+.||..+++.+++.+.+
T Consensus 633 mvGDgiNDapAl~~A~vgia~ 653 (741)
T PRK11033 633 MVGDGINDAPAMKAASIGIAM 653 (741)
T ss_pred EEECCHHhHHHHHhCCeeEEe
Confidence 999999999999999965544
No 161
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.49 E-value=2.6e-05 Score=65.99 Aligned_cols=91 Identities=18% Similarity=0.189 Sum_probs=61.5
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCC-cccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl-~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.+.+.||+.++|+.+.+. +.+++.|.+.+.++..++ +.+.- ..+|+.++..+.+...+... .+-++.+|-++++
T Consensus 34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~-~~ldp~~~~~~~~~~r~~~~~~~~~~---~KdL~~l~~~~~~ 108 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVL-DALDPNGKLFSRRLYRDDCTFDKGSY---IKDLSKLGRDLDN 108 (159)
T ss_dssp EEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHH-HHHTTTTSSEEEEEEGGGSEEETTEE---E--GGGSSS-GGG
T ss_pred eEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHH-Hhhhhhcccccccccccccccccccc---ccchHHHhhcccc
Confidence 356789999999999766 999999999999999888 65554 46778888777654322211 1456677778999
Q ss_pred EEEEecChhhhHHHHhc
Q 016755 168 SLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~a 184 (383)
+++|.|++.-...-...
T Consensus 109 vvivDD~~~~~~~~~~N 125 (159)
T PF03031_consen 109 VVIVDDSPRKWALQPDN 125 (159)
T ss_dssp EEEEES-GGGGTTSGGG
T ss_pred EEEEeCCHHHeeccCCc
Confidence 99999999754333333
No 162
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.45 E-value=0.0046 Score=56.34 Aligned_cols=104 Identities=14% Similarity=0.236 Sum_probs=72.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHH--hhcCCc--cc-C--cEEE----------------eCCCCCCC
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWN--ES-F--SVIV----------------GSDEVRTG 147 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~--~~~gl~--~~-f--~~i~----------------~~~~~~~~ 147 (383)
..-+.+.++++.|+.+|+++..+|..+..+....+. +.+|+. .. | +..+ -|--+..+
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 355688999999999999999999888766555441 345542 11 0 0011 00012245
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEecChhhhHH----HHhcCCEEEEecCC
Q 016755 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA----GKAAGMEVVAVPSL 194 (383)
Q Consensus 148 kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~----a~~aG~~~i~v~~~ 194 (383)
.++..++...+.+.|..|+.++||+|+...+.. ++..|+..+++...
T Consensus 161 ~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 161 QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT 211 (252)
T ss_pred CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence 668899999999999999999999999976654 45668888887664
No 163
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.44 E-value=0.00035 Score=75.32 Aligned_cols=116 Identities=16% Similarity=0.090 Sum_probs=79.6
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC----cEEEeCCCC----------------CCCCCC
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF----SVIVGSDEV----------------RTGKPS 150 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f----~~i~~~~~~----------------~~~kp~ 150 (383)
++.|++.+.++.|++.|+++.++|+.......... +..|+...- ...+.+.++ -+++-.
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia-~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAIC-RRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHH-HHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 57899999999999999999999998877766666 777774311 112332221 123445
Q ss_pred hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcc
Q 016755 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (383)
Q Consensus 151 p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~ 210 (383)
|+--..+++.++-..+.+.|+||+.||+.|.+.|++.+.+- .+ .+.....|+.++.+
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g--~~~ak~aAD~vl~d 672 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SG--TEVAKEASDMVLAD 672 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CC--cHHHHHhcCeEEcc
Confidence 66667777777767788999999999999999999955432 22 22223345666544
No 164
>PLN02645 phosphoglycolate phosphatase
Probab=97.40 E-value=0.0011 Score=62.61 Aligned_cols=90 Identities=16% Similarity=0.143 Sum_probs=68.5
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.++||+.++|+.|+++|++++++||++... +...+ +.+|+...++.|+++.. .....+++.+.....
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l-~~lGi~~~~~~I~ts~~---------~~~~~l~~~~~~~~~ 113 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF-ESLGLNVTEEEIFSSSF---------AAAAYLKSINFPKDK 113 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEeehHH---------HHHHHHHhhccCCCC
Confidence 367899999999999999999999988433 33344 56788766677766532 455566666665556
Q ss_pred EEEEecChhhhHHHHhcCCEEEE
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
.++++++..+.+.++.+|+.++.
T Consensus 114 ~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 114 KVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred EEEEEcCHHHHHHHHHCCCEEec
Confidence 78899999999999999998764
No 165
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=97.39 E-value=0.0033 Score=58.12 Aligned_cols=103 Identities=15% Similarity=0.239 Sum_probs=74.9
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHh--hcCCcccCcEEEeCCCCC-----CCCC-------------
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVGSDEVR-----TGKP------------- 149 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~--~~gl~~~f~~i~~~~~~~-----~~kp------------- 149 (383)
+.-.|....+|+.|+++|.++.++||+|..|+..-+.- ...+.++||.|++-.+-. ..+|
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~w 318 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLW 318 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhh
Confidence 34456788899999999999999999999999876521 224678899888643211 0111
Q ss_pred ------------ChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHH-hcCCEEEEec
Q 016755 150 ------------SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVP 192 (383)
Q Consensus 150 ------------~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~-~aG~~~i~v~ 192 (383)
....+...++.-|+...+++++||++ .|+...- ++|+++..+-
T Consensus 319 dkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 319 DKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 12335566777788999999999999 7988776 8999876543
No 166
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.34 E-value=0.00063 Score=70.15 Aligned_cols=89 Identities=13% Similarity=0.140 Sum_probs=69.1
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~ 170 (383)
++.|++.+.+++|++.|+++.++|+.......... +.+|+.+ +++. -.|+--..+++.+.-....+.|
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA-~~lGI~~----v~a~-------~~PedK~~~v~~lq~~g~~Vam 513 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA-AEAGVDD----FIAE-------ATPEDKIALIRQEQAEGKLVAM 513 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCE----EEcC-------CCHHHHHHHHHHHHHcCCeEEE
Confidence 67899999999999999999999999888877776 7888843 3321 1344444444555444567999
Q ss_pred EecChhhhHHHHhcCCEEEEe
Q 016755 171 IEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 171 VGDs~~Di~~a~~aG~~~i~v 191 (383)
+||+.||..+.+.+++.+.+-
T Consensus 514 vGDG~NDapAL~~AdvGiAm~ 534 (675)
T TIGR01497 514 TGDGTNDAPALAQADVGVAMN 534 (675)
T ss_pred ECCCcchHHHHHhCCEeEEeC
Confidence 999999999999999976654
No 167
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.21 E-value=0.00079 Score=69.73 Aligned_cols=89 Identities=20% Similarity=0.222 Sum_probs=68.4
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-++.|++.+.++.|++.|+++.++|+-.+...+... +.+|++++ +.. - .|+--....+++.-....+.
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA-~~lGId~v----~Ae-----l--lPedK~~~V~~l~~~g~~Va 603 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA-KELGIDEV----RAE-----L--LPEDKAEIVRELQAEGRKVA 603 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcChHhh----ecc-----C--CcHHHHHHHHHHHhcCCEEE
Confidence 468899999999999999999999998888777766 88888433 321 1 23444455556655557899
Q ss_pred EEecChhhhHHHHhcCCEEEE
Q 016755 170 VIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~ 190 (383)
||||+.||..+...|.+...+
T Consensus 604 mVGDGINDAPALA~AdVGiAm 624 (713)
T COG2217 604 MVGDGINDAPALAAADVGIAM 624 (713)
T ss_pred EEeCCchhHHHHhhcCeeEee
Confidence 999999999999999885443
No 168
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.20 E-value=0.0044 Score=51.96 Aligned_cols=95 Identities=17% Similarity=0.164 Sum_probs=63.0
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
|.+-+.+++..-.++|-.++++|+....- +...|.+.+.+...-..++.|+-- ||...---.+++..++ -
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~---k~~qy~Kt~~i~~~~~----~ 187 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKP---KPGQYTKTQWIQDKNI----R 187 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCC---CcccccccHHHHhcCc----e
Confidence 44566788888888999999999876543 344555556665443445555432 2222222234444444 5
Q ss_pred EEEecChhhhHHHHhcCCEEEEecC
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
++.|||-+|+.+|+++|.+.|-+-+
T Consensus 188 IhYGDSD~Di~AAkeaG~RgIRilR 212 (237)
T COG3700 188 IHYGDSDNDITAAKEAGARGIRILR 212 (237)
T ss_pred EEecCCchhhhHHHhcCccceeEEe
Confidence 8999999999999999998877655
No 169
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.18 E-value=0.0011 Score=55.87 Aligned_cols=82 Identities=18% Similarity=0.129 Sum_probs=62.7
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc-ccC-cEEEeCCCCCCCCCChHHHHHHHHHcCCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~-~~f-~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~ 166 (383)
.+.++||+.++|+.+++. ++++++|++.+.++...+ +.++.. .+| +.+++.+++. .+. .+.+-.-++.+.+
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl-~~ldp~~~~F~~ri~~rd~~~--~~~---~KdL~~i~~~d~~ 128 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIA-KLIDPDGKYFGDRIISRDESG--SPH---TKSLLRLFPADES 128 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHH-HHhCcCCCeeccEEEEeccCC--CCc---cccHHHHcCCCcc
Confidence 467899999999999965 999999999999999988 788877 478 5667766653 111 1122134577889
Q ss_pred cEEEEecChhh
Q 016755 167 SSLVIEDSVIG 177 (383)
Q Consensus 167 e~l~VGDs~~D 177 (383)
.++.|+|++.=
T Consensus 129 ~vvivDd~~~~ 139 (156)
T TIGR02250 129 MVVIIDDREDV 139 (156)
T ss_pred cEEEEeCCHHH
Confidence 99999999843
No 170
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.15 E-value=0.0015 Score=67.53 Aligned_cols=89 Identities=15% Similarity=0.156 Sum_probs=70.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~ 170 (383)
++.||+.+.+++|++.|+++.++|+-......... +.+|+.+ +++ .-.|+--..+.++++-..+-+.|
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA-~elGId~----v~A-------~~~PedK~~iV~~lQ~~G~~VaM 512 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-AEAGVDD----FLA-------EATPEDKLALIRQEQAEGRLVAM 512 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCcE----EEc-------cCCHHHHHHHHHHHHHcCCeEEE
Confidence 57899999999999999999999998888777666 7888843 322 22456666666666666677999
Q ss_pred EecChhhhHHHHhcCCEEEEe
Q 016755 171 IEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 171 VGDs~~Di~~a~~aG~~~i~v 191 (383)
+||+.||..+.++|.+...+-
T Consensus 513 tGDGvNDAPALa~ADVGIAMg 533 (679)
T PRK01122 513 TGDGTNDAPALAQADVGVAMN 533 (679)
T ss_pred ECCCcchHHHHHhCCEeEEeC
Confidence 999999999999999866554
No 171
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.11 E-value=0.0024 Score=66.03 Aligned_cols=90 Identities=11% Similarity=0.089 Sum_probs=71.3
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-++.|++.+.+++|++.|+++.++|+-......... +.+|+.+ ++ ..-.|+--..+.+.++-..+-+.
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA-~elGI~~----v~-------A~~~PedK~~iV~~lQ~~G~~Va 507 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIA-KEAGVDR----FV-------AECKPEDKINVIREEQAKGHIVA 507 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCce----EE-------cCCCHHHHHHHHHHHHhCCCEEE
Confidence 368899999999999999999999998887777666 8889853 22 12245666666677666667799
Q ss_pred EEecChhhhHHHHhcCCEEEEe
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v 191 (383)
|+||+.||..+.++|.+...+-
T Consensus 508 MtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 508 MTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred EECCChhhHHHHHhCCEEEEeC
Confidence 9999999999999999865544
No 172
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.07 E-value=0.0014 Score=71.10 Aligned_cols=99 Identities=15% Similarity=0.071 Sum_probs=73.8
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----------------CCCCChHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----------------~~kp~p~~~ 154 (383)
++.|++.+.++.|++.|+++.++|+-......... +..|+...-..++.+.++. +..-.|+--
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA-~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIA-RNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHH-HHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 57789999999999999999999998877776666 7788864323455554422 233355555
Q ss_pred HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 155 ~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
..+.+.+.-..+-+.|+||+.||..|.++|.+...+
T Consensus 658 ~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm 693 (941)
T TIGR01517 658 QLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM 693 (941)
T ss_pred HHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec
Confidence 566666655566899999999999999999886553
No 173
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.06 E-value=0.001 Score=71.47 Aligned_cols=98 Identities=12% Similarity=0.108 Sum_probs=74.5
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----------------CCCCChHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----------------~~kp~p~~~ 154 (383)
++.|++.+.++.|++.|+++.++|+-......... +.+|+.. +.++.|.+.. +..-.|+--
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA-~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVC-HEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 46789999999999999999999998877766666 7888853 3455554432 233456666
Q ss_pred HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 155 ~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
..+.+.+.-..+-+.|+||+.||..+.++|.+...+-
T Consensus 627 ~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg 663 (902)
T PRK10517 627 ERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD 663 (902)
T ss_pred HHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC
Confidence 6666666656677999999999999999999876553
No 174
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.05 E-value=0.0014 Score=70.29 Aligned_cols=98 Identities=9% Similarity=0.062 Sum_probs=72.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----------------CCCCChHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----------------~~kp~p~~~ 154 (383)
++.|++.+.++.|++.|+++.++|+.......... +.+|+.. +.++.+.+.. +..-.|+--
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA-~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARIC-QEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 56789999999999999999999998877666555 7888853 2345444321 223345555
Q ss_pred HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 155 ~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
..+.+.+.-..+.+.|+||+.||..+.+.|.+...+-
T Consensus 592 ~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg 628 (867)
T TIGR01524 592 SRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD 628 (867)
T ss_pred HHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC
Confidence 5555555555678999999999999999999976654
No 175
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.95 E-value=0.0016 Score=70.09 Aligned_cols=97 Identities=14% Similarity=0.097 Sum_probs=74.1
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----------------CCCCChHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----------------~~kp~p~~~ 154 (383)
++.|++.+.++.|++.|+++.++|+-......... +.+|+.. +.++.|.+.. +..-.|+--
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA-~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKIC-REVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 57789999999999999999999998877766666 7888853 3455554432 233356666
Q ss_pred HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 155 ~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
..+.+.+.-..+-+.|+||+.||..+.++|.+...+
T Consensus 627 ~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 627 SRVLKALQANGHTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred HHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe
Confidence 666666666667899999999999999999987554
No 176
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.92 E-value=0.00094 Score=58.78 Aligned_cols=45 Identities=22% Similarity=0.145 Sum_probs=41.9
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEE
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i 189 (383)
..+.+++.+++.++++++++++++++|||+.||+.+++.+|+.++
T Consensus 159 p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 159 PAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred cCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 457889999999999999999999999999999999999999765
No 177
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.91 E-value=0.0022 Score=67.83 Aligned_cols=96 Identities=17% Similarity=0.125 Sum_probs=72.4
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCC----------------------CCCC
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----------------------RTGK 148 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~----------------------~~~k 148 (383)
++.|++.+.++.|++.|+++.++|+.......... +.+|+.. .++.+++. -+..
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA-~~lGI~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr 517 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETA-RRLGLGT---NIYTADVLLKGDNRDDLPSGELGEMVEDADGFAE 517 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCC---CCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEe
Confidence 57889999999999999999999998888777666 7888853 12222211 1233
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
-.|+--..+.+.+.-..+-+.|+||+.||..+.++|.+...+
T Consensus 518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe
Confidence 355555666666666667899999999999999999987654
No 178
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.87 E-value=0.0026 Score=69.39 Aligned_cols=99 Identities=10% Similarity=0.102 Sum_probs=73.6
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccc----------CcEEEeCCCCC---------------
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES----------FSVIVGSDEVR--------------- 145 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~----------f~~i~~~~~~~--------------- 145 (383)
++.|++.+.++.|++.|+++.++|+.......... +..|+... -..++.|.++.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA-~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIA-QEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 57889999999999999999999998888777666 77887531 12455554332
Q ss_pred -CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 146 -TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 146 -~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
+..-.|+--..+.+.+.-..+.+.|+||+.||..|.+.|.+.+.+
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm 770 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec
Confidence 223355555556666655567899999999999999999986654
No 179
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=96.84 E-value=0.011 Score=52.23 Aligned_cols=85 Identities=16% Similarity=0.220 Sum_probs=58.0
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHH-HH---HHHHhhcCCcccC-cEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT-IE---SKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~-i~---~~l~~~~gl~~~f-~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
...+.||+.+++....++|..+..+||...+. .. .-| ...|+.... ++++.- ...+++..-...+.+
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nL-k~~g~~~~~~~~~llk---k~~k~Ke~R~~~v~k---- 191 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENL-KSEGLPQVLESHLLLK---KDKKSKEVRRQAVEK---- 191 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHH-HHcCcccccccceEEe---eCCCcHHHHHHHHhh----
Confidence 45789999999999999999999999987765 22 234 456665432 334333 234555555555444
Q ss_pred CCCcEEEEecChhhhHHH
Q 016755 164 EPSSSLVIEDSVIGVVAG 181 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a 181 (383)
.-.-++.|||...|....
T Consensus 192 ~~~iVm~vGDNl~DF~d~ 209 (274)
T COG2503 192 DYKIVMLVGDNLDDFGDN 209 (274)
T ss_pred ccceeeEecCchhhhcch
Confidence 445689999999886544
No 180
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.50 E-value=0.013 Score=45.44 Aligned_cols=84 Identities=19% Similarity=0.178 Sum_probs=52.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.++||+.++++.|+++|.++.++||++... +...| +.+|+..-.+.|+++. ......+++. .....
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L-~~~Gi~~~~~~i~ts~---------~~~~~~l~~~-~~~~~ 82 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL-KKLGIPVDEDEIITSG---------MAAAEYLKEH-KGGKK 82 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH-HHTTTT--GGGEEEHH---------HHHHHHHHHH-TTSSE
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH-HhcCcCCCcCEEEChH---------HHHHHHHHhc-CCCCE
Confidence 689999999999999999999999997433 34455 5678765445666543 2334444442 33566
Q ss_pred EEEEecChhhhHHHHhcCC
Q 016755 168 SLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~ 186 (383)
++++|-. ...+.++.+|+
T Consensus 83 v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 83 VYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEES-H-HHHHHHHHTTE
T ss_pred EEEEcCH-HHHHHHHHcCC
Confidence 7777754 55566666664
No 181
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.49 E-value=0.011 Score=47.58 Aligned_cols=29 Identities=14% Similarity=0.279 Sum_probs=23.7
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRAT 120 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~ 120 (383)
+.+++.+.|+.++++|+.+.++|+.+...
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 55677788899989999999999987654
No 182
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.47 E-value=0.0035 Score=56.44 Aligned_cols=46 Identities=17% Similarity=0.150 Sum_probs=41.2
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
.+-.+..+++.+++.+|++++++++|||+.||+.|.+.+|..+++-
T Consensus 183 ~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~ 228 (254)
T PF08282_consen 183 KGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG 228 (254)
T ss_dssp TTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET
T ss_pred CCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc
Confidence 4556789999999999999999999999999999999999976554
No 183
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.43 E-value=0.023 Score=47.51 Aligned_cols=93 Identities=19% Similarity=0.238 Sum_probs=55.8
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhc-----CCcccCcEEEeCCCC-------CCCCCChHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQH-----GWNESFSVIVGSDEV-------RTGKPSPDIFLE 156 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~-----gl~~~f~~i~~~~~~-------~~~kp~p~~~~~ 156 (383)
..||+.++++.+++.||++..+|..+... ...+| ... ++.. --++.+.+. ..-..+|+.|+.
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L-~~~~q~~~~lP~--Gpv~~sP~~l~~al~rEvi~~~p~~fK~ 104 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL-AQHQQQGHNLPD--GPVLLSPDSLFSALHREVISKDPEEFKI 104 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH-HHHHhCCccCCC--CCEEECCcchhhhhhccccccChHHHHH
Confidence 45789999999999999999999988543 33344 222 2221 122333111 111335555554
Q ss_pred HH-HHcC-C----CCCcEEEEecChhhhHHHHhcCCE
Q 016755 157 AA-KRLN-M----EPSSSLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 157 ~~-~~lg-~----~p~e~l~VGDs~~Di~~a~~aG~~ 187 (383)
.+ +.+. . ...=...+|++.+|+.+=+++|++
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 43 2221 1 112255689999999999999985
No 184
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.35 E-value=0.013 Score=63.26 Aligned_cols=103 Identities=16% Similarity=0.138 Sum_probs=77.3
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC--cEEEeCCCCC----------------CCCCCh
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVR----------------TGKPSP 151 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f--~~i~~~~~~~----------------~~kp~p 151 (383)
-+|.|++.+.++.|++.|+++.++|+-........- +..|+..-- +.++.|.+.. +.+=.|
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa-~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIA-KECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHH-HHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 468899999999999999999999998777666555 778876533 2366665432 223355
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+--..+.+.+.-...-+.|.||+.||+.|.++|.+.+.+...
T Consensus 625 ~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~ 666 (917)
T COG0474 625 EQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGE 666 (917)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEeccc
Confidence 555556666666677899999999999999999998766654
No 185
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=96.27 E-value=0.035 Score=46.26 Aligned_cols=93 Identities=16% Similarity=0.079 Sum_probs=56.1
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCC-cccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl-~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
..+-.++...|..++++ .++..+|.....+.+..- ..+-. ...++++....- .+| -.+.+.++++
T Consensus 71 ~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~-~~l~~q~ih~~~l~i~g~--h~K------V~~vrth~id---- 136 (194)
T COG5663 71 ALLAQLVKQVLPSLKEE-HRLIYITARKADLTRITY-AWLFIQNIHYDHLEIVGL--HHK------VEAVRTHNID---- 136 (194)
T ss_pred HHHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHH-HHHHHhccchhhhhhhcc--ccc------chhhHhhccC----
Confidence 34455778888888887 578888877666544221 11111 111233321111 112 2334555554
Q ss_pred EEEecCh-hhhHHHHhcCCEEEEecCCCC
Q 016755 169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 169 l~VGDs~-~Di~~a~~aG~~~i~v~~~~~ 196 (383)
+++.|+. |-.+.|+.+|++++.++....
T Consensus 137 lf~ed~~~na~~iAk~~~~~vilins~yn 165 (194)
T COG5663 137 LFFEDSHDNAGQIAKNAGIPVILINSPYN 165 (194)
T ss_pred ccccccCchHHHHHHhcCCcEEEecCccc
Confidence 7899999 778889999999999988544
No 186
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.23 E-value=0.0061 Score=55.37 Aligned_cols=61 Identities=15% Similarity=0.024 Sum_probs=47.1
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc-------CCEEEEecCCCCccccccccchhhccccc
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-------GMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~a-------G~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
.|...++.++++++..+.++++|||+.+|+.+++.+ |...+.+..+ .....+++++++..+
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g----~~~~~A~~~~~~~~~ 234 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG----SKKTVAKFHLTGPQQ 234 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC----CcCCCceEeCCCHHH
Confidence 356999999999999999999999999999999988 6666666432 122345667766655
No 187
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=96.18 E-value=0.061 Score=53.12 Aligned_cols=78 Identities=12% Similarity=0.020 Sum_probs=47.1
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC----CC------CCCCChHH-HHHHHHHcCCCCCc
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----VR------TGKPSPDI-FLEAAKRLNMEPSS 167 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~----~~------~~kp~p~~-~~~~~~~lg~~p~e 167 (383)
..+..++.| +.+++|.+++.+++..+.+++|. |.|++.+- .+ .++...+. ...+.+.+| +...
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTEL~v~~~G~~TG~~~G~n~~ek~~~rl~~~~g-~~~~ 174 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSELVVNRFGFATGFIRGTDVDQSVANRVANLFV-DERP 174 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeeeEEEeeccEEEEEEecCccHHHHHHHHHHHhC-ccCc
Confidence 556667788 89999999999999999666887 55543321 00 12333333 223333355 3345
Q ss_pred EEEEecChhhhHHHH
Q 016755 168 SLVIEDSVIGVVAGK 182 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~ 182 (383)
.+-+||+..|-....
T Consensus 175 ~vg~~~~~~~~~f~~ 189 (498)
T PLN02499 175 QLGLGRISASSSFLS 189 (498)
T ss_pred eecccCCcccchhhh
Confidence 777888775544443
No 188
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.17 E-value=0.017 Score=63.08 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=70.9
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC------------------------cEEEeCCCCC-
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF------------------------SVIVGSDEVR- 145 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f------------------------~~i~~~~~~~- 145 (383)
++.|++.+.++.+++.|+++.++|+.......... +.+|+..-- ..++.|.+..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia-~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 56789999999999999999999999988777666 667763210 1345544322
Q ss_pred -----------------CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 146 -----------------TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 146 -----------------~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
+.+-.|+--..+.+.+.-...-|.|+||+.||+.|.+.|.+...+
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam 708 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 708 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec
Confidence 233345555555555554456799999999999999999986544
No 189
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=96.12 E-value=0.021 Score=49.73 Aligned_cols=94 Identities=14% Similarity=0.104 Sum_probs=56.3
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc--cCcEEEeCCCC--------CCCCCChHHHHHHHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SFSVIVGSDEV--------RTGKPSPDIFLEAAKR 160 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~--~f~~i~~~~~~--------~~~kp~p~~~~~~~~~ 160 (383)
...|++.++|+.+.+. |.++|-|.+...+++..+ ..+++.. .+...+.-+.. ..+.-.-.-+..+-++
T Consensus 45 ~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l-~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~ 122 (195)
T TIGR02245 45 LMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKM-TELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWAL 122 (195)
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHH-HHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhh
Confidence 4678999999999985 999999999999999888 6555421 11111111111 0110001112223334
Q ss_pred cC--CCCCcEEEEecChhhhHHHHhcCC
Q 016755 161 LN--MEPSSSLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 161 lg--~~p~e~l~VGDs~~Di~~a~~aG~ 186 (383)
++ .+.+++++|.|++.-..+--..|+
T Consensus 123 l~~~~~~~ntiiVDd~p~~~~~~P~N~i 150 (195)
T TIGR02245 123 LPEFYSMKNTIMFDDLRRNFLMNPQNGL 150 (195)
T ss_pred cccCCCcccEEEEeCCHHHHhcCCCCcc
Confidence 54 377999999999965443333344
No 190
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=95.99 E-value=0.017 Score=59.60 Aligned_cols=100 Identities=15% Similarity=0.140 Sum_probs=76.3
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCc----EEEeCCCCC----------------CCCC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVGSDEVR----------------TGKP 149 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~----~i~~~~~~~----------------~~kp 149 (383)
-+|.|++.+.++.++..|+++.++|+-.......+. +..|+...-+ ..++|.++. +..-
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~-r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIA-REIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH-HHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 357889999999999999999999999888777666 7788765444 445554432 2233
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
.|.--.++.+.|.-..+=+.|-||+.||-.+.+.|.+...+
T Consensus 662 ~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM 702 (972)
T KOG0202|consen 662 EPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM 702 (972)
T ss_pred CchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee
Confidence 55666666777776777899999999999999999885544
No 191
>PTZ00174 phosphomannomutase; Provisional
Probab=95.90 E-value=0.0039 Score=56.77 Aligned_cols=44 Identities=7% Similarity=-0.172 Sum_probs=36.8
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEec----ChhhhHHHHhcCCEEEEec
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGD----s~~Di~~a~~aG~~~i~v~ 192 (383)
..+-.|..+++.++++ ++++++||| +.||++|.+.++...+.|.
T Consensus 184 ~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 184 PKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred eCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 3566678899999888 699999999 8999999998877666665
No 192
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=95.87 E-value=0.038 Score=55.75 Aligned_cols=86 Identities=15% Similarity=0.112 Sum_probs=65.7
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-.+.|++.+.++.|++.|+++.++|+.........- +.+|+ ++.-.|+-.....+++.-....+.
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia-~~lgi--------------~~~~~p~~K~~~v~~l~~~g~~v~ 410 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIA-KELGI--------------FARVTPEEKAALVEALQKKGRVVA 410 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCc--------------eeccCHHHHHHHHHHHHHCCCEEE
Confidence 468899999999999999999999998888776655 66665 122345555555555544457899
Q ss_pred EEecChhhhHHHHhcCCEEEE
Q 016755 170 VIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~ 190 (383)
++||+.||..+.+.+++...+
T Consensus 411 ~vGDg~nD~~al~~Advgia~ 431 (499)
T TIGR01494 411 MTGDGVNDAPALKKADVGIAM 431 (499)
T ss_pred EECCChhhHHHHHhCCCcccc
Confidence 999999999999999876443
No 193
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.85 E-value=0.032 Score=58.18 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=65.8
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-++.|++...+..|++.|++++++|+-......... +..|+ +.|++. -+| +--....+++.-....+.
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA-~~VGi----~~V~ae-----v~P--~~K~~~Ik~lq~~~~~Va 789 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVA-QQVGI----DNVYAE-----VLP--EQKAEKIKEIQKNGGPVA 789 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHH-HhhCc----ceEEec-----cCc--hhhHHHHHHHHhcCCcEE
Confidence 467899999999999999999999998888777666 77774 555542 122 222233344444457899
Q ss_pred EEecChhhhHHHHhcCCEEEEe
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v 191 (383)
||||+.||-.+...|.+....-
T Consensus 790 MVGDGINDaPALA~AdVGIaig 811 (951)
T KOG0207|consen 790 MVGDGINDAPALAQADVGIAIG 811 (951)
T ss_pred EEeCCCCccHHHHhhccceeec
Confidence 9999999999998887755433
No 194
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=95.85 E-value=0.028 Score=51.10 Aligned_cols=49 Identities=16% Similarity=0.307 Sum_probs=42.8
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE 143 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~ 143 (383)
|.+.+.|.+|++.|.-+++=|-+.++++...+ +.+++.++|+.++++..
T Consensus 145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl-~~~~L~~~Fd~ii~~G~ 193 (297)
T PF05152_consen 145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSL-KELKLEGYFDIIICGGN 193 (297)
T ss_pred hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHH-HHhCCccccEEEEeCCc
Confidence 44567788999999889999999999999999 88899999999998754
No 195
>PLN02580 trehalose-phosphatase
Probab=95.84 E-value=0.039 Score=53.14 Aligned_cols=37 Identities=14% Similarity=-0.027 Sum_probs=31.8
Q ss_pred CCCChHHHHHHHHHcCCCCCc---EEEEecChhhhHHHHh
Q 016755 147 GKPSPDIFLEAAKRLNMEPSS---SLVIEDSVIGVVAGKA 183 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~p~e---~l~VGDs~~Di~~a~~ 183 (383)
+..|..+++.+++++|++..+ .++|||..+|..|.+.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~ 338 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKV 338 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHh
Confidence 556788999999999988764 3899999999999986
No 196
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.58 E-value=0.0072 Score=46.86 Aligned_cols=59 Identities=22% Similarity=0.273 Sum_probs=28.7
Q ss_pred EEEecCCcccccHHHHHHHH--HHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHH
Q 016755 12 VILDLDGTLLNTDGMFSEVL--KTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKH 73 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~--~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 73 (383)
++||+||||++....+..+. -+.+++.|.++- .+..-...+..+.... +..+|++.+.+
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~~--~lTNns~~s~~~~~~~-L~~~Gi~~~~~ 61 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPVV--FLTNNSSRSREEYAKK-LKKLGIPVDED 61 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEEE--EEES-SSS-HHHHHHH-HHHTTTT--GG
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCEE--EEeCCCCCCHHHHHHH-HHhcCcCCCcC
Confidence 68999999998754443332 223444453321 1122222333444444 47788775543
No 197
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.44 E-value=0.035 Score=49.89 Aligned_cols=37 Identities=16% Similarity=0.310 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
...+.|+.|+++|+.++++|+.+...+...+ ..+++.
T Consensus 19 ~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~-~~~~~~ 55 (254)
T PF08282_consen 19 ETIEALKELQEKGIKLVIATGRSYSSIKRLL-KELGID 55 (254)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSTHHHHHHHH-HHTTHC
T ss_pred HHHHHHHhhcccceEEEEEccCccccccccc-ccccch
Confidence 3456778888899999999999999888888 666664
No 198
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.37 E-value=0.11 Score=48.03 Aligned_cols=88 Identities=19% Similarity=0.226 Sum_probs=58.8
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChH---HHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~---~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.++||+.++|+.|+++|++++++||++.. .....+ +.+|+....+.++++. ......+++.......
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l-~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~ 87 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF-ARLGFNGLAEQLFSSA---------LCAARLLRQPPDAPKA 87 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEecHH---------HHHHHHHHhhCcCCCE
Confidence 36788999999999999999999997533 222345 5677754444444432 3444555554445677
Q ss_pred EEEEecChhhhHHHHhcCCEEE
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i 189 (383)
++++|+. .....++.+|+..+
T Consensus 88 v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 88 VYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred EEEEcCH-HHHHHHHHCCCEEe
Confidence 9999986 34455677888754
No 199
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.25 E-value=0.065 Score=51.65 Aligned_cols=101 Identities=19% Similarity=0.157 Sum_probs=81.9
Q ss_pred cCCCCc--hHHHHHHHHHHCCCCEEEEeCC--ChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 89 KVKALP--GANRLIKHLSCHGVPMALASNS--HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 89 ~~~~~p--g~~~lL~~L~~~G~~~~i~s~~--~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
...++| .-.++.+.+.+.|.++.++|.- |.+.++..| ...|.+..---++.+.++...|.....|..+++.-+++
T Consensus 95 KevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L-~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd 173 (635)
T COG5610 95 KEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFL-NSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVD 173 (635)
T ss_pred eeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHH-HhcCCCccCceeeecceeehhcccchHHHHHHhhcCCC
Confidence 344555 4468999999999999999986 455666666 55565443334778888899999999999999999999
Q ss_pred CCcEEEEecCh-hhhHHHHhcCCEEEE
Q 016755 165 PSSSLVIEDSV-IGVVAGKAAGMEVVA 190 (383)
Q Consensus 165 p~e~l~VGDs~-~Di~~a~~aG~~~i~ 190 (383)
|...+.+||.. .|..++++.|+.|..
T Consensus 174 ~~~w~H~GDN~~aD~l~pk~LgI~Tlf 200 (635)
T COG5610 174 PKKWIHCGDNWVADYLKPKNLGISTLF 200 (635)
T ss_pred hhheEEecCchhhhhcCccccchhHHH
Confidence 99999999999 699999999997753
No 200
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.24 E-value=0.1 Score=57.41 Aligned_cols=101 Identities=13% Similarity=0.061 Sum_probs=68.7
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcE--------------------------------
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-------------------------------- 137 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~-------------------------------- 137 (383)
-++.|++.+.++.|++.|+++.++|+.......... +..|+...-+.
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA-~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVA-RECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQV 733 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccc
Confidence 358899999999999999999999998877666555 66776321111
Q ss_pred ---------------------EEeCCCCC-------------------CCCCChHHHHHHHHHcCCCCCcEEEEecChhh
Q 016755 138 ---------------------IVGSDEVR-------------------TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG 177 (383)
Q Consensus 138 ---------------------i~~~~~~~-------------------~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~D 177 (383)
++.|.++. +.+-.|+--..+.+.+.-...-+.|+||+.||
T Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND 813 (1054)
T TIGR01657 734 EIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGAND 813 (1054)
T ss_pred cccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHH
Confidence 12221110 11223444444445555455679999999999
Q ss_pred hHHHHhcCCEEEEe
Q 016755 178 VVAGKAAGMEVVAV 191 (383)
Q Consensus 178 i~~a~~aG~~~i~v 191 (383)
+.|.++|.+...+-
T Consensus 814 ~~ALK~AdVGIam~ 827 (1054)
T TIGR01657 814 CGALKQADVGISLS 827 (1054)
T ss_pred HHHHHhcCcceeec
Confidence 99999998866554
No 201
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=95.08 E-value=0.06 Score=49.57 Aligned_cols=35 Identities=3% Similarity=0.028 Sum_probs=21.1
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~a 184 (383)
|..++..+++.+|+..+++++|||+.||+.|.+.+
T Consensus 175 Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~ 209 (266)
T PRK10187 175 KGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVV 209 (266)
T ss_pred HHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHH
Confidence 44455555566666666666666666666666655
No 202
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.98 E-value=0.12 Score=45.16 Aligned_cols=92 Identities=16% Similarity=0.206 Sum_probs=46.9
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcc----cCcEEEeCCCCCCCCCCh-HHHHHHHHHcCCC
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNE----SFSVIVGSDEVRTGKPSP-DIFLEAAKRLNME 164 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~----~f~~i~~~~~~~~~kp~p-~~~~~~~~~lg~~ 164 (383)
+|-....|..+++ +...+.+-+.... ....| ...|+.- .|-++. +...||.+. ..+...-++++..
T Consensus 136 lpre~aaLa~~rE--yseti~~rs~d~~~~~~~~~L-~e~glt~v~garf~~v~---~as~gKg~Aa~~ll~~y~rl~~~ 209 (274)
T COG3769 136 LPREQAALAMLRE--YSETIIWRSSDERMAQFTARL-NERGLTFVHGARFWHVL---DASAGKGQAANWLLETYRRLGGA 209 (274)
T ss_pred CChHHhHHHHHHH--hhhheeecccchHHHHHHHHH-HhcCceEEeccceEEEe---ccccCccHHHHHHHHHHHhcCce
Confidence 3444555666665 3455555554441 22334 3445421 112222 223455532 3333333444432
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
. -++.+||++||+.+.......+ .|.
T Consensus 210 r-~t~~~GDg~nD~Pl~ev~d~Af-iV~ 235 (274)
T COG3769 210 R-TTLGLGDGPNDAPLLEVMDYAF-IVK 235 (274)
T ss_pred e-EEEecCCCCCcccHHHhhhhhe-eec
Confidence 2 5999999999999987765443 444
No 203
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=94.94 E-value=0.55 Score=41.36 Aligned_cols=41 Identities=20% Similarity=0.181 Sum_probs=32.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl 131 (383)
..++.||+.+.++.|.+. ..-.++|.+.+.++.+.. ...|+
T Consensus 81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a-~~ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTA-SMIGV 121 (315)
T ss_pred hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHH-HhcCC
Confidence 468999999999999886 666788888888877666 55554
No 204
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=94.93 E-value=0.057 Score=59.54 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=72.5
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC----------------------------------
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF---------------------------------- 135 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f---------------------------------- 135 (383)
-++.||+.+.++.|++.|+++.++|+-..+...... ...|+-..-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA-~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 708 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIG-YSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNN 708 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhh
Confidence 468899999999999999999999997766554443 333432110
Q ss_pred -------cEEEeCCCCC----------------------CCCCChHHHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcC
Q 016755 136 -------SVIVGSDEVR----------------------TGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAG 185 (383)
Q Consensus 136 -------~~i~~~~~~~----------------------~~kp~p~~~~~~~~~lg~~-p~e~l~VGDs~~Di~~a~~aG 185 (383)
..++.|.+.. +.+-.|.--..+.+.+.-. ..-++++||+.||+.|.++|.
T Consensus 709 ~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~Ad 788 (1057)
T TIGR01652 709 LGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEAD 788 (1057)
T ss_pred hccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcC
Confidence 0133332111 1111222222222322222 467999999999999999998
Q ss_pred CEEEEecCCCCccccccccchhhcccccc
Q 016755 186 MEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 186 ~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
+.+ .+.. .+.......||.++.++..+
T Consensus 789 VGI-gi~g-~eg~qA~~aaD~~i~~F~~L 815 (1057)
T TIGR01652 789 VGV-GISG-KEGMQAVMASDFAIGQFRFL 815 (1057)
T ss_pred eee-EecC-hHHHHHHHhhhhhhhhHHHH
Confidence 866 3322 22112334568887765543
No 205
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=94.93 E-value=0.21 Score=45.84 Aligned_cols=90 Identities=21% Similarity=0.245 Sum_probs=55.8
Q ss_pred ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 88 ~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
...+++||+.++|+.|+++|.++.++||++... +...|....++....+.|+++.... ...+.+. .+
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at---------~~~l~~~-~~ 90 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDAT---------ADYLAKQ-KP 90 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHH---------HHHHHhh-CC
Confidence 467899999999999999999999999997554 3344423355655567777664322 1112111 12
Q ss_pred CCcEEEEecChhhhHHHHhcCCEE
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEV 188 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~ 188 (383)
+..|++|| ...+.+..+.+|+..
T Consensus 91 ~~kv~viG-~~~l~~~l~~~G~~~ 113 (269)
T COG0647 91 GKKVYVIG-EEGLKEELEGAGFEL 113 (269)
T ss_pred CCEEEEEC-CcchHHHHHhCCcEE
Confidence 25566666 333455555555543
No 206
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.92 E-value=0.21 Score=41.08 Aligned_cols=97 Identities=16% Similarity=0.152 Sum_probs=60.2
Q ss_pred CCCCchHHHHHHHHHHC-C-CCEEEEeCCChH-------HHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH-
Q 016755 90 VKALPGANRLIKHLSCH-G-VPMALASNSHRA-------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK- 159 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~-G-~~~~i~s~~~~~-------~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~- 159 (383)
....|....-+++++.. | ..++++||+... .....+....|+.- ....+-+|..-.+..+
T Consensus 60 ~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpV----------lRHs~kKP~ct~E~~~y 129 (190)
T KOG2961|consen 60 LAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPV----------LRHSVKKPACTAEEVEY 129 (190)
T ss_pred cccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCce----------EeecccCCCccHHHHHH
Confidence 34455555555555543 3 568889887422 22233333444421 1223333444444444
Q ss_pred HcC----CCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCC
Q 016755 160 RLN----MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 160 ~lg----~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~ 196 (383)
..| ..+++++||||.+ .||.+|...|.-.++..++..
T Consensus 130 ~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 130 HFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred HhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 334 6889999999999 899999999999999988644
No 207
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=94.65 E-value=0.06 Score=47.21 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=27.5
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHH
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKI 125 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l 125 (383)
+.+.+.|++|+++|++++++|+.+...+...+
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~ 51 (204)
T TIGR01484 20 PETIEALERLREAGVKVVLVTGRSLAEIKELL 51 (204)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
Confidence 34567788999999999999999999888877
No 208
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=94.45 E-value=0.038 Score=51.59 Aligned_cols=78 Identities=12% Similarity=-0.048 Sum_probs=53.8
Q ss_pred eCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 114 s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
..++++|++ .+.+.++. ..+++|+|+.+|+....- ...+ ..+++.|+.++.++.
T Consensus 207 ~lsa~~Fi~-iL~~~l~~----~~ivvG~Df~FG~~r~G~-~~l~--------------------~~~~~~gf~v~~v~~ 260 (297)
T cd02169 207 ALDARIFRK-YIAPALNI----TKRYVGEEPFSRVTAIYN-QTMQ--------------------EELLSPAIEVIEIER 260 (297)
T ss_pred cCCHHHHHH-HHHHHcCC----cEEEEcCCCCCCCcchhH-HHHH--------------------HhcccCCCEEEEecc
Confidence 445678887 66556666 899999999999865444 3222 225667899999888
Q ss_pred CCCccccccccchhhccccccCccc
Q 016755 194 LPKQTHRYTAADEVINSLLDLRPEK 218 (383)
Q Consensus 194 ~~~~~~~~~~a~~vi~~l~e~~~~~ 218 (383)
...++... +++.|++.+.+++...
T Consensus 261 ~~~~g~~I-SST~IR~~l~~G~v~~ 284 (297)
T cd02169 261 KKYDGQPI-SASTVRQLLKEGNLEE 284 (297)
T ss_pred cccCCcEE-cHHHHHHHHHcCCHHH
Confidence 66555554 4477777777777664
No 209
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.23 E-value=0.28 Score=47.89 Aligned_cols=93 Identities=19% Similarity=0.208 Sum_probs=74.3
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----CCCCChHHHHHHHHHcCCCCCcEE
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----TGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-.....+..|+++|+-++++|-+....+...+.++. +.++--+++. ..-|+.+-++++++++++..+..+
T Consensus 258 k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp------~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmv 331 (574)
T COG3882 258 KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP------DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMV 331 (574)
T ss_pred HHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC------CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceE
Confidence 345678888999999999999999888888774443 5666555554 457899999999999999999999
Q ss_pred EEecChhhhHHHHhcCCEEEEecC
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
|++|++...+..+.-+- +.+++.
T Consensus 332 FiDD~p~ErE~vk~~~~-v~Vi~~ 354 (574)
T COG3882 332 FIDDNPAERELVKRELP-VSVIEF 354 (574)
T ss_pred EecCCHHHHHHHHhcCc-eeeccC
Confidence 99999998888888765 444443
No 210
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=94.14 E-value=0.076 Score=48.89 Aligned_cols=14 Identities=43% Similarity=0.586 Sum_probs=12.1
Q ss_pred cEEEEecCCccccc
Q 016755 10 SCVILDLDGTLLNT 23 (383)
Q Consensus 10 k~viFDlDGTL~d~ 23 (383)
.+|+||+||||++.
T Consensus 15 ~li~~D~DGTLl~~ 28 (266)
T PRK10187 15 YAWFFDLDGTLAEI 28 (266)
T ss_pred EEEEEecCCCCCCC
Confidence 57889999999973
No 211
>PLN02423 phosphomannomutase
Probab=93.90 E-value=0.03 Score=50.88 Aligned_cols=44 Identities=9% Similarity=-0.167 Sum_probs=36.7
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEec----ChhhhHHHHhcCCEEEEecC
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGD----s~~Di~~a~~aG~~~i~v~~ 193 (383)
..+-.|..+++.++ +++++++||| +.||++|.+.-|+.++.|..
T Consensus 185 ~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 185 PQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred eCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 35566677777766 8999999999 69999999999998888866
No 212
>PRK10444 UMP phosphatase; Provisional
Probab=93.01 E-value=0.82 Score=41.57 Aligned_cols=51 Identities=25% Similarity=0.321 Sum_probs=36.3
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHH--hhcCCcccCcEEEeC
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWNESFSVIVGS 141 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~--~~~gl~~~f~~i~~~ 141 (383)
.+.|++.++++.|+++|.+++++||++......... ..+|+.--.+.++++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts 69 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS 69 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence 367899999999999999999999998754433331 456764333555544
No 213
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=92.60 E-value=0.1 Score=42.24 Aligned_cols=139 Identities=12% Similarity=0.167 Sum_probs=77.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh--
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-- 85 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 85 (383)
+-+.|..|||-||.|....|..++. ..+..+++.. ...|......... ..| .+.+...+
T Consensus 2 ~kk~iaIDmD~vLadll~ewv~~~N-~y~D~~lk~~-----di~gwdik~yv~~---~~g----------~i~~il~ep~ 62 (180)
T COG4502 2 NKKTIAIDMDTVLADLLREWVKRYN-IYKDKLLKMS-----DIKGWDIKNYVKP---ECG----------KIYDILKEPH 62 (180)
T ss_pred CCceEEeeHHHHHHHHHHHHHHHhh-hccccCcChH-----hhcccchhhccCc---cCC----------eeeeeccCcc
Confidence 4568999999999998777766554 2223222211 1111111111000 000 01111111
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCC--ChHHHHH---HHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHH
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNS--HRATIES---KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~--~~~~i~~---~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~ 160 (383)
.+..+.+.|++.+++++|.+. |.++++|.+ .....+. ++.+.+.+-++-..|+|+.-. .-
T Consensus 63 fFRnL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgnKn-iv------------- 127 (180)
T COG4502 63 FFRNLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGNKN-IV------------- 127 (180)
T ss_pred hhhhcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecCCC-eE-------------
Confidence 223567899999999999987 999999887 2222221 233666766665667776421 11
Q ss_pred cCCCCCcEEEEecChhhhHHHHhcC
Q 016755 161 LNMEPSSSLVIEDSVIGVVAGKAAG 185 (383)
Q Consensus 161 lg~~p~e~l~VGDs~~Di~~a~~aG 185 (383)
.--++|.|++..++..+...
T Consensus 128 -----kaDilIDDnp~nLE~F~G~k 147 (180)
T COG4502 128 -----KADILIDDNPLNLENFKGNK 147 (180)
T ss_pred -----EeeEEecCCchhhhhccCce
Confidence 12467899998877665443
No 214
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=92.20 E-value=0.43 Score=47.02 Aligned_cols=88 Identities=15% Similarity=0.149 Sum_probs=67.0
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~ 170 (383)
.+.||+.|-+.+|++.|++..++|+.++-...... +..|++++. ..-+|+--..+.++.+....=+.|
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA-~EAGVDdfi-----------AeatPEdK~~~I~~eQ~~grlVAM 514 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-AEAGVDDFI-----------AEATPEDKLALIRQEQAEGRLVAM 514 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHH-HHhCchhhh-----------hcCChHHHHHHHHHHHhcCcEEEE
Confidence 46789999999999999999999987765444433 667775432 123456666677777777778999
Q ss_pred EecChhhhHHHHhcCCEEEE
Q 016755 171 IEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 171 VGDs~~Di~~a~~aG~~~i~ 190 (383)
.||+.||..+..+|.....+
T Consensus 515 tGDGTNDAPALAqAdVg~AM 534 (681)
T COG2216 515 TGDGTNDAPALAQADVGVAM 534 (681)
T ss_pred cCCCCCcchhhhhcchhhhh
Confidence 99999999999999885544
No 215
>PLN03190 aminophospholipid translocase; Provisional
Probab=91.65 E-value=0.88 Score=50.64 Aligned_cols=49 Identities=20% Similarity=0.210 Sum_probs=35.1
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCc
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~ 216 (383)
.-|+++||+.||+.|.++|.+.+ ++.. .+..+....||+.|.....+..
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG-~EG~qA~~aSDfaI~~Fr~L~r 920 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISG-QEGRQAVMASDFAMGQFRFLVP 920 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecC-chhHHHHHhhccchhhhHHHHH
Confidence 45999999999999999998866 4432 2222334466888888776543
No 216
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=91.38 E-value=1.6 Score=39.70 Aligned_cols=49 Identities=10% Similarity=0.309 Sum_probs=37.2
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCC---hHHHHHHHHhhcCCcccCcEEEeC
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGS 141 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~---~~~i~~~l~~~~gl~~~f~~i~~~ 141 (383)
+.|++.+++++|+++|+++.++||+. ...+...+ +.+|+....+.|+++
T Consensus 18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l-~~~g~~~~~~~iit~ 69 (249)
T TIGR01457 18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEML-ASFDIPATLETVFTA 69 (249)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEeeH
Confidence 45688999999999999999999843 45555666 667876655666655
No 217
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=91.05 E-value=1.3 Score=39.93 Aligned_cols=94 Identities=20% Similarity=0.270 Sum_probs=53.0
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeC----CC----CCCCCC-------ChHH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS----DE----VRTGKP-------SPDI 153 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~----~~----~~~~kp-------~p~~ 153 (383)
.+.+.+|+.++++.|.++++|+.|.|.+-...++..+ +..+....=-.|++- ++ .++.-| +...
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL-~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~ 166 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVL-RQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESA 166 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHH-HHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHH-HHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccc
Confidence 5788999999999999999999999999999999999 444432211122221 01 011112 1111
Q ss_pred HHH--HHHHcCCCCCcEEEEecChhhhHHHHhc
Q 016755 154 FLE--AAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 154 ~~~--~~~~lg~~p~e~l~VGDs~~Di~~a~~a 184 (383)
+.. ..+++ -...+++..||+..|+.|+..+
T Consensus 167 l~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 167 LEDSPYFKQL-KKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp HTTHHHHHCT-TT--EEEEEESSSGGGGTTTT-
T ss_pred ccCchHHHHh-ccCCcEEEecCccCChHhhcCC
Confidence 110 01111 2457899999999999999777
No 218
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=90.78 E-value=0.58 Score=44.46 Aligned_cols=95 Identities=16% Similarity=0.224 Sum_probs=59.4
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCCh---------HH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHR---------AT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~---------~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
++|.+..=|..|.+.||.+.|.||... .+ ++..+ ..+++ .+......-.-...||...+....++
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~-anl~v--Pi~~~~A~~~~~yRKP~tGMwe~~~~ 181 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIV-ANLGV--PIQLLAAIIKGKYRKPSTGMWEFLKR 181 (422)
T ss_pred eccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHH-HhcCC--ceEEeeeccCCcccCcchhHHHHHHH
Confidence 344455667788888999999888631 11 22233 23333 33444444444688999999988887
Q ss_pred HcC----CCCCcEEEEecCh---------------hhhHHHHhcCCEEE
Q 016755 160 RLN----MEPSSSLVIEDSV---------------IGVVAGKAAGMEVV 189 (383)
Q Consensus 160 ~lg----~~p~e~l~VGDs~---------------~Di~~a~~aG~~~i 189 (383)
.++ +.-..++++||-. .|+..|.++|+...
T Consensus 182 ~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 182 LENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred HhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 664 3344566777632 47888899988653
No 219
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.99 E-value=3.5 Score=37.11 Aligned_cols=94 Identities=12% Similarity=0.194 Sum_probs=62.0
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC-C-------CCCCCC-------ChHHH
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-E-------VRTGKP-------SPDIF 154 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~-~-------~~~~kp-------~p~~~ 154 (383)
+.+..|+.+++..|..+++|+.+.|.+--..++..+.+..++.+ +..+++-. + .++.+| +-..+
T Consensus 137 i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p-n~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~ 215 (298)
T KOG3128|consen 137 IALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP-NVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVL 215 (298)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc-cHHhhhhhhhhcccchhhhhhHHHHHHHccchHHH
Confidence 45667899999999999999999999988888887755555544 22222211 1 112222 12233
Q ss_pred HHHHHHcC--CCCCcEEEEecChhhhHHHHhc
Q 016755 155 LEAAKRLN--MEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 155 ~~~~~~lg--~~p~e~l~VGDs~~Di~~a~~a 184 (383)
+...+.+. -...++++.||+..|+.|+..+
T Consensus 216 ~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 216 QNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 33334333 3567899999999999998765
No 220
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=88.66 E-value=1.1 Score=42.88 Aligned_cols=99 Identities=17% Similarity=0.193 Sum_probs=72.8
Q ss_pred HHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc--CCcccCcEEEeCCC------------------------------
Q 016755 96 ANRLIKHLSCHGVPMALASNSHRATIESKISYQH--GWNESFSVIVGSDE------------------------------ 143 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~--gl~~~f~~i~~~~~------------------------------ 143 (383)
+..+|..+++.|.+..+.||+...+........+ ++..+|+.++....
T Consensus 203 ~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~ 282 (424)
T KOG2469|consen 203 IVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPL 282 (424)
T ss_pred cccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcc
Confidence 3348899999999999999999888776663333 57778887765520
Q ss_pred CCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHH-HHhcCCEEEEecCC
Q 016755 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVA-GKAAGMEVVAVPSL 194 (383)
Q Consensus 144 ~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~-a~~aG~~~i~v~~~ 194 (383)
-..+.+.+.....+++.++....+++++||+. .|+.- -+.-|++++.|.+.
T Consensus 283 e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe 335 (424)
T KOG2469|consen 283 EQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE 335 (424)
T ss_pred hhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehh
Confidence 01234466778888899999999999999999 46544 45668887776653
No 221
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=88.64 E-value=0.76 Score=42.57 Aligned_cols=68 Identities=13% Similarity=0.118 Sum_probs=39.4
Q ss_pred cEEEEecCCcccccHHHH---HHHHHHHHHHcCC-CCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Q 016755 10 SCVILDLDGTLLNTDGMF---SEVLKTFLVKYGK-EWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN 77 (383)
Q Consensus 10 k~viFDlDGTL~d~~~~~---~~a~~~~~~~~g~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (383)
=+++||+||+|+.....+ ..+++.+....|. .++...+..--|.......+.+-..++.+.+++++..
T Consensus 36 fgfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviq 107 (389)
T KOG1618|consen 36 FGFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQ 107 (389)
T ss_pred eeEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHh
Confidence 378999999999874433 3444444444332 3333333333344444555666677787777766643
No 222
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=88.44 E-value=0.73 Score=48.81 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=27.5
Q ss_pred CCchHHHHHHHHHH-CCCCEEEEeCCChHHHHHHH
Q 016755 92 ALPGANRLIKHLSC-HGVPMALASNSHRATIESKI 125 (383)
Q Consensus 92 ~~pg~~~lL~~L~~-~G~~~~i~s~~~~~~i~~~l 125 (383)
+.+.+.+.|+.|.+ .|..++++|+.+...++..+
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~ 549 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWF 549 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHh
Confidence 34566788888888 48999999999988887766
No 223
>PTZ00174 phosphomannomutase; Provisional
Probab=88.16 E-value=0.62 Score=42.27 Aligned_cols=29 Identities=24% Similarity=0.390 Sum_probs=20.5
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFL 35 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~ 35 (383)
|.+|+|+|||||||+++...+.+...+++
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai 31 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTL 31 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHH
Confidence 56899999999999988544433333433
No 224
>PLN02423 phosphomannomutase
Probab=88.11 E-value=0.62 Score=42.25 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=20.8
Q ss_pred CCccEEE-EecCCcccccHHHHHHHHHHHHHHc
Q 016755 7 KLMSCVI-LDLDGTLLNTDGMFSEVLKTFLVKY 38 (383)
Q Consensus 7 ~~ik~vi-FDlDGTL~d~~~~~~~a~~~~~~~~ 38 (383)
.++++++ |||||||++....+.+...++++++
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l 36 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKEATPEMLEFMKEL 36 (245)
T ss_pred CccceEEEEeccCCCcCCCCcCCHHHHHHHHHH
Confidence 3566665 9999999988654444444544443
No 225
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=88.10 E-value=3.1 Score=37.27 Aligned_cols=78 Identities=13% Similarity=0.075 Sum_probs=56.5
Q ss_pred EEEeCCC-hHHHHHHHHhhcCCcccCc--EEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCE
Q 016755 111 ALASNSH-RATIESKISYQHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 111 ~i~s~~~-~~~i~~~l~~~~gl~~~f~--~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~ 187 (383)
++||++. -..+...| ..++..+|. .|+++-. .++...|+.+.+++|-+...-++|||+..-..+|+..+++
T Consensus 179 vLVTs~qLVPaLaKcL--Ly~L~~~f~ieNIYSa~k----vGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wP 252 (274)
T TIGR01658 179 VLVTSGQLIPSLAKCL--LFRLDTIFRIENVYSSIK----VGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWP 252 (274)
T ss_pred EEEEcCccHHHHHHHH--HhccCCccccccccchhh----cchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCC
Confidence 4555543 22222223 356766553 4555433 3457899999999999889999999999999999999999
Q ss_pred EEEecCC
Q 016755 188 VVAVPSL 194 (383)
Q Consensus 188 ~i~v~~~ 194 (383)
++-+...
T Consensus 253 Fw~I~~h 259 (274)
T TIGR01658 253 FVKIDLH 259 (274)
T ss_pred eEEeecC
Confidence 9988763
No 226
>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain. Proteins of this family contain the C-terminal domain of citrate lyase ligase EC:6.2.1.22.
Probab=87.24 E-value=0.66 Score=40.02 Aligned_cols=78 Identities=14% Similarity=-0.033 Sum_probs=49.7
Q ss_pred EeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 113 ~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
...++++|++. +.+.++. ..+++|+|+.+|+....-...+ +...+.|+.+..++
T Consensus 91 a~lsa~~Fi~~-L~~~l~~----~~ivvG~df~FG~~~~G~~~~L---------------------~~~~~~g~~v~~I~ 144 (182)
T smart00764 91 TTLDLRIFRKY-IAPALGI----THRYVGEEPFSPVTAIYNQTMK---------------------QTLLSPAIEVVEIE 144 (182)
T ss_pred hcCCHHHHHHH-HHHHcCc----eEEEEcCCCCCCCCCccCHHHH---------------------HHHhhCCCEEEEEe
Confidence 45578888874 5466666 8999999999997643322221 11235588888887
Q ss_pred CCCCccccccccchhhccccccCcc
Q 016755 193 SLPKQTHRYTAADEVINSLLDLRPE 217 (383)
Q Consensus 193 ~~~~~~~~~~~a~~vi~~l~e~~~~ 217 (383)
+...++.. .+++.+++.+.+++..
T Consensus 145 r~~~~g~~-iSST~IR~~L~~G~v~ 168 (182)
T smart00764 145 RKKANGQP-ISASTVRKLLKEGNLE 168 (182)
T ss_pred cccCCCcE-ECHHHHHHHHHcCCHH
Confidence 75444333 3557777777666543
No 227
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=86.86 E-value=0.87 Score=41.61 Aligned_cols=49 Identities=18% Similarity=0.389 Sum_probs=36.3
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeC
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGS 141 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~ 141 (383)
+.|++.++++.|+++|++++++||++... +...+ ..+|+.--.+.++++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l-~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL-QRLGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH-HHcCCCCCHHHeEcH
Confidence 67899999999999999999999976553 44455 556765333555543
No 228
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=86.52 E-value=1.3 Score=47.48 Aligned_cols=33 Identities=12% Similarity=0.099 Sum_probs=24.1
Q ss_pred CchHHHHHHHH-HHCCCCEEEEeCCChHHHHHHH
Q 016755 93 LPGANRLIKHL-SCHGVPMALASNSHRATIESKI 125 (383)
Q Consensus 93 ~pg~~~lL~~L-~~~G~~~~i~s~~~~~~i~~~l 125 (383)
.|++.++|+.| ++.|..++++|+.....++..+
T Consensus 618 ~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f 651 (854)
T PLN02205 618 SSKSIDILNTLCRDKNNMVFIVSARSRKTLADWF 651 (854)
T ss_pred CHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHh
Confidence 34566777776 5567788888888888777766
No 229
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=86.51 E-value=5.6 Score=36.47 Aligned_cols=46 Identities=13% Similarity=-0.036 Sum_probs=34.1
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcC---CEEEEecCC
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG---MEVVAVPSL 194 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG---~~~i~v~~~ 194 (383)
.+...++.+++++.....-+++.||...|-.+.+... -.++.+..+
T Consensus 182 ~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~ 230 (266)
T COG1877 182 SKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG 230 (266)
T ss_pred chHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC
Confidence 3677788888888777777999999999988887775 444444443
No 230
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
Probab=86.45 E-value=0.59 Score=39.27 Aligned_cols=80 Identities=24% Similarity=0.315 Sum_probs=49.6
Q ss_pred HHHHHHHHHHCCCCEEEE--------eCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCC---hHHHHHHHHHcCCC
Q 016755 96 ANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS---PDIFLEAAKRLNME 164 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~--------s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~---p~~~~~~~~~lg~~ 164 (383)
..+-++.|.+.|+...++ ..++++|++.+|.+.+++ ..+++|+|+.+|+.. .+.++.
T Consensus 64 ~~ek~~~l~~~Gvd~~~~~~F~~~~~~ls~~~Fi~~iL~~~l~~----~~ivvG~DfrFG~~~~G~~~~L~~-------- 131 (157)
T PF06574_consen 64 LEEKLELLESLGVDYVIVIPFTEEFANLSPEDFIEKILKEKLNV----KHIVVGEDFRFGKNRSGDVELLKE-------- 131 (157)
T ss_dssp HHHHHHHHHHTTESEEEEE-CCCHHCCS-HHHHHHHHCCCHCTE----EEEEEETT-EESGGGEEEHHHHHH--------
T ss_pred HHHHHHHHHHcCCCEEEEecchHHHHcCCHHHHHHHHHHhcCCc----cEEEEccCccCCCCCCCCHHHHHH--------
Confidence 456677778888876554 445778888877446766 899999999999753 333333
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccccc
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 202 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~ 202 (383)
.+++.|+.+..++....+...++
T Consensus 132 ---------------~~~~~g~~v~~v~~~~~~~~~IS 154 (157)
T PF06574_consen 132 ---------------LGKEYGFEVEVVPPVKIDGEKIS 154 (157)
T ss_dssp ---------------CTTTT-SEEEEE---EETTEE-S
T ss_pred ---------------hcccCceEEEEECCEEcCCcEeC
Confidence 25667888888888644444443
No 231
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=85.60 E-value=2.8 Score=44.06 Aligned_cols=99 Identities=16% Similarity=0.134 Sum_probs=60.4
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCc--EEEeCCCCCC----------------CCCCh
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVRT----------------GKPSP 151 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~--~i~~~~~~~~----------------~kp~p 151 (383)
-+..||+.+.++.++..|+.+.++|+..-...+.+. ...|+...=+ .++-|.++.. ....|
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA-~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP 724 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIA-RECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSP 724 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHH-HHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCC
Confidence 457899999999999999999999997765555444 5556543222 3344444431 01112
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEE
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i 189 (383)
.--+.+.+-+.-..+=+.+-||+.||-.+.++|.+...
T Consensus 725 ~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlA 762 (1034)
T KOG0204|consen 725 NDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLA 762 (1034)
T ss_pred chHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchh
Confidence 11111222222222335667999999999999987443
No 232
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=83.88 E-value=8.5 Score=34.55 Aligned_cols=88 Identities=20% Similarity=0.228 Sum_probs=55.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCCh---HHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~---~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p 165 (383)
...++|++.+.++.++++|+++.++||+.. ..+...+.+.+|+.-..+.++.+. ......+++.. +.
T Consensus 12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~---------~~~~~~l~~~~-~~ 81 (236)
T TIGR01460 12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG---------SVTKDLLRQRF-EG 81 (236)
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH---------HHHHHHHHHhC-CC
Confidence 456789999999999999999999998763 333344534366654445555442 22233333322 23
Q ss_pred CcEEEEecChhhhHHHHhcCCE
Q 016755 166 SSSLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~ 187 (383)
..++++|.. ...+.++.+|+.
T Consensus 82 ~~v~v~G~~-~~~~~l~~~g~~ 102 (236)
T TIGR01460 82 EKVYVIGVG-ELRESLEGLGFR 102 (236)
T ss_pred CEEEEECCH-HHHHHHHHcCCc
Confidence 458888853 455666777764
No 233
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=82.32 E-value=4.6 Score=38.19 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=56.9
Q ss_pred CCCCchHHHHHHHHHHC----CCCEEEEeCCC---hHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 90 VKALPGANRLIKHLSCH----GVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~----G~~~~i~s~~~---~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
..+.|++.++++.|+.. |+++.++||+. .......+.+.+|+.--.+.++.+. ......+++++
T Consensus 15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~---------~~~~~ll~~~~ 85 (321)
T TIGR01456 15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH---------SPYKSLVNKYE 85 (321)
T ss_pred ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh---------HHHHHHHHHcC
Confidence 35689999999999998 99999999986 3333333335677643323333331 13344444442
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
..+++||.+- -...++.+|+..++
T Consensus 86 ---~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 86 ---KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred ---CceEEEeChH-HHHHHHHcCCcccc
Confidence 2688898764 56777789987654
No 234
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=82.20 E-value=8.5 Score=39.32 Aligned_cols=22 Identities=9% Similarity=0.200 Sum_probs=17.7
Q ss_pred EEEEecChhhhHHHHhcCCEEE
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i 189 (383)
...||...+|+-.=++.|++..
T Consensus 653 YAgFGNR~TDviSY~~VgVP~~ 674 (738)
T KOG2116|consen 653 YAGFGNRITDVISYRQVGVPLS 674 (738)
T ss_pred eeecCCCcccceeeeeecCCcc
Confidence 4558899999999999988643
No 235
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=77.68 E-value=11 Score=30.20 Aligned_cols=82 Identities=17% Similarity=0.155 Sum_probs=52.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHH-HHHHhhcCCcc---------cCcEEEeCCCCCCCCCChHHHHHHH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIE-SKISYQHGWNE---------SFSVIVGSDEVRTGKPSPDIFLEAA 158 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~-~~l~~~~gl~~---------~f~~i~~~~~~~~~kp~p~~~~~~~ 158 (383)
....++++...|..|++.|+.++++|++....+. +.| +.+.+.. .|..+..++.. +-+.|.+.-
T Consensus 42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L-~~fkvk~~Gvlkps~e~ft~~~~g~gs-----klghfke~~ 115 (144)
T KOG4549|consen 42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGL-ETFKVKQTGVLKPSLEEFTFEAVGDGS-----KLGHFKEFT 115 (144)
T ss_pred eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHH-HHhccCcccccchhhhcCceeeecCcc-----cchhHHHHh
Confidence 3567899999999999999999999999765543 344 4443322 22233333222 334556666
Q ss_pred HHcCCCCCcEEEEecChh
Q 016755 159 KRLNMEPSSSLVIEDSVI 176 (383)
Q Consensus 159 ~~lg~~p~e~l~VGDs~~ 176 (383)
+..++...+..++.|-..
T Consensus 116 n~s~~~~k~~~~fdDesr 133 (144)
T KOG4549|consen 116 NNSNSIEKNKQVFDDESR 133 (144)
T ss_pred hccCcchhceeeeccccc
Confidence 666666666777766553
No 236
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=77.02 E-value=24 Score=39.16 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=26.6
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT 120 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~ 120 (383)
+-++-+|+.+.++.|++.|+++.++|+-..+.
T Consensus 649 EDkLQdgVPetI~~L~~AGIKIWVLTGDK~ET 680 (1151)
T KOG0206|consen 649 EDKLQDGVPETIAKLAQAGIKIWVLTGDKQET 680 (1151)
T ss_pred echhccCchHHHHHHHHcCCEEEEEcCcHHHH
Confidence 34677899999999999999999988865443
No 237
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=76.99 E-value=3.2 Score=44.05 Aligned_cols=38 Identities=13% Similarity=-0.067 Sum_probs=32.6
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcC
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG 185 (383)
.+-.|..+++.+++ +.+++.++++||+.||..|.+.++
T Consensus 654 ~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~ 691 (726)
T PRK14501 654 AGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALP 691 (726)
T ss_pred CCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcc
Confidence 34557788888888 788999999999999999999874
No 238
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=76.85 E-value=5.1 Score=36.82 Aligned_cols=41 Identities=22% Similarity=0.342 Sum_probs=33.8
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF 135 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f 135 (383)
+.+.++|+.|+++|++++++|+.+...+...+ +.+++..++
T Consensus 24 ~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~-~~l~l~~~~ 64 (273)
T PRK00192 24 EPAKPALKALKEKGIPVIPCTSKTAAEVEVLR-KELGLEDPF 64 (273)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCCCE
Confidence 45678899999999999999999998888877 777876543
No 239
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=71.86 E-value=11 Score=34.41 Aligned_cols=37 Identities=14% Similarity=0.181 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
...+.+++++++|+.++++|+.+...+...+ +.+++.
T Consensus 24 ~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~ 60 (270)
T PRK10513 24 AVKQAIAAARAKGVNVVLTTGRPYAGVHRYL-KELHME 60 (270)
T ss_pred HHHHHHHHHHHCCCEEEEecCCChHHHHHHH-HHhCCC
Confidence 4467789999999999999999998888777 667764
No 240
>PLN03017 trehalose-phosphatase
Probab=70.86 E-value=2.4 Score=40.66 Aligned_cols=38 Identities=13% Similarity=-0.100 Sum_probs=30.5
Q ss_pred CCCChHHHHHHHHHcCCCC---CcEEEEecChhhhHHHHhc
Q 016755 147 GKPSPDIFLEAAKRLNMEP---SSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~p---~e~l~VGDs~~Di~~a~~a 184 (383)
+..|..+++.+++.++... .-.+|+||..+|-.+.+.+
T Consensus 281 ~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L 321 (366)
T PLN03017 281 EWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKML 321 (366)
T ss_pred CCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHH
Confidence 3456788999999988653 3589999999998888766
No 241
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=69.94 E-value=3.4 Score=35.74 Aligned_cols=27 Identities=30% Similarity=0.437 Sum_probs=18.2
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHH
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVK 37 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~ 37 (383)
+++||+||||.-........+.+.+..
T Consensus 13 l~lfdvdgtLt~~r~~~~~e~~~~l~~ 39 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPRQKVTPEMLEFLQK 39 (252)
T ss_pred EEEEecCCccccccccCCHHHHHHHHH
Confidence 689999999997754444444444443
No 242
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=69.43 E-value=57 Score=29.71 Aligned_cols=75 Identities=13% Similarity=0.114 Sum_probs=47.1
Q ss_pred CCCEEEEeCCChHHHHHHHHhhc-CCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcC
Q 016755 107 GVPMALASNSHRATIESKISYQH-GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185 (383)
Q Consensus 107 G~~~~i~s~~~~~~i~~~l~~~~-gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG 185 (383)
.++++++|......-++.+ +.+ .|.-..|..+ +--|-++..+++.. .-=++++|...-++.|. .+
T Consensus 186 piRtalVTAR~apah~RvI-~TLr~Wgv~vDEaf----FLgG~~K~~vL~~~--------~phIFFDDQ~~H~~~a~-~~ 251 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVI-RTLRSWGVRVDEAF----FLGGLPKGPVLKAF--------RPHIFFDDQDGHLESAS-KV 251 (264)
T ss_pred ceEEEEEEcCCCchhHHHH-HHHHHcCCcHhHHH----HhCCCchhHHHHhh--------CCCEeecCchhhhhHhh-cC
Confidence 4778999987666556666 322 2221222211 12355665555543 23489999999999988 78
Q ss_pred CEEEEecCCC
Q 016755 186 MEVVAVPSLP 195 (383)
Q Consensus 186 ~~~i~v~~~~ 195 (383)
++++.|+.+.
T Consensus 252 vps~hVP~gv 261 (264)
T PF06189_consen 252 VPSGHVPYGV 261 (264)
T ss_pred CCEEeccCCc
Confidence 8888888764
No 243
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=69.25 E-value=8.7 Score=41.65 Aligned_cols=36 Identities=14% Similarity=0.334 Sum_probs=30.1
Q ss_pred CCCCchHHHHHHHHHHC-CCCEEEEeCCChHHHHHHH
Q 016755 90 VKALPGANRLIKHLSCH-GVPMALASNSHRATIESKI 125 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~-G~~~~i~s~~~~~~i~~~l 125 (383)
..+.|++.++|+.|.+. +-.++|+|+...+.++..+
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~f 657 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENF 657 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHh
Confidence 35667888999999875 4679999999999999888
No 244
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=68.91 E-value=9.8 Score=33.52 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=31.1
Q ss_pred HHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 96 ANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
..++|+.|++.|++++++|+.+...+...+ +.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~-~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQ-KALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCC
Confidence 467788899999999999999999998888 777775
No 245
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=68.69 E-value=37 Score=37.36 Aligned_cols=71 Identities=8% Similarity=0.046 Sum_probs=46.4
Q ss_pred HHHHHHHHhhcCCcccCcEEEeCC-----CCCCCCCChHHHHHHHHHcCCCCCcE-EEEecChh-hhHHHHhcCCE-EEE
Q 016755 119 ATIESKISYQHGWNESFSVIVGSD-----EVRTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSVI-GVVAGKAAGME-VVA 190 (383)
Q Consensus 119 ~~i~~~l~~~~gl~~~f~~i~~~~-----~~~~~kp~p~~~~~~~~~lg~~p~e~-l~VGDs~~-Di~~a~~aG~~-~i~ 190 (383)
..+...| ...++.. +.+++.. -....-.+..+++.++.++|++.+++ +++|||-| |++.... |.+ +|+
T Consensus 924 ~elr~~L-r~~gLr~--~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~-G~~~tvi 999 (1050)
T TIGR02468 924 KELRKLL-RIQGLRC--HAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLG-GLHKTVI 999 (1050)
T ss_pred HHHHHHH-HhCCCce--EEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhC-CceeEEE
Confidence 3455555 4555543 2333332 12345567899999999999999999 55999998 9887743 454 444
Q ss_pred ecC
Q 016755 191 VPS 193 (383)
Q Consensus 191 v~~ 193 (383)
+..
T Consensus 1000 ~~g 1002 (1050)
T TIGR02468 1000 LKG 1002 (1050)
T ss_pred Eec
Confidence 443
No 246
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=68.36 E-value=19 Score=33.77 Aligned_cols=85 Identities=19% Similarity=0.252 Sum_probs=53.3
Q ss_pred cCCCCchHHHHHHHHHHCC-CCEEEEeCCChHHHHHHHHhhcC-------------CcccCcEEEeCCCCCCCCCChHHH
Q 016755 89 KVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHG-------------WNESFSVIVGSDEVRTGKPSPDIF 154 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G-~~~~i~s~~~~~~i~~~l~~~~g-------------l~~~f~~i~~~~~~~~~kp~p~~~ 154 (383)
.-.++||+..+++.|.+.| .++..+||++......+- +.++ +...++.++.+...+.+ ..+
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~-efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~----~~l 268 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQ-EFITNRNFPYGPLLLRRWGGVLDNIIESGAARKG----QSL 268 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHH-HHHhcCCCCCCchhHhhcCCcccccccchhhhcc----cHH
Confidence 4578999999999999988 899999999977644221 2221 12233444444332222 334
Q ss_pred HHHHHHcCCCCCcEEEEecCh-hhhHH
Q 016755 155 LEAAKRLNMEPSSSLVIEDSV-IGVVA 180 (383)
Q Consensus 155 ~~~~~~lg~~p~e~l~VGDs~-~Di~~ 180 (383)
..++.++ +-...+.|||+- .|.+.
T Consensus 269 ~nil~~~--p~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 269 RNILRRY--PDRKFVLVGDSGEHDPEI 293 (373)
T ss_pred HHHHHhC--CCceEEEecCCCCcCHHH
Confidence 4444444 346788899887 67654
No 247
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=68.21 E-value=2.8 Score=37.87 Aligned_cols=29 Identities=7% Similarity=0.024 Sum_probs=18.6
Q ss_pred CCchHHHHHHHHHHC-CCCEEEEeCCChHH
Q 016755 92 ALPGANRLIKHLSCH-GVPMALASNSHRAT 120 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~-G~~~~i~s~~~~~~ 120 (383)
+.|++.++|+.|.+. +..++|+|+.+...
T Consensus 26 ~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~ 55 (244)
T TIGR00685 26 VSDRLLTILQKLAARPHNAIWIISGRKFLE 55 (244)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEECCChhh
Confidence 445666777777665 34567888876443
No 248
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=67.55 E-value=11 Score=33.50 Aligned_cols=39 Identities=23% Similarity=0.239 Sum_probs=32.2
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~ 133 (383)
+.+.+++++|+++|++++++|+.+...+...+ +.+|+..
T Consensus 18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~-~~lg~~~ 56 (225)
T TIGR02461 18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYR-EELGVEP 56 (225)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCCC
Confidence 45678899999999999999999988877777 6777643
No 249
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=67.52 E-value=67 Score=29.91 Aligned_cols=96 Identities=17% Similarity=0.175 Sum_probs=58.0
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHH--hhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~--~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~ 166 (383)
.-.+.||+.+.+..|++.|.++.++||++....+.++. ..+|+.. +..++. -.|. ......+++..-..+
T Consensus 36 g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~-----v~e~~i--~ssa-~~~a~ylk~~~~~~k 107 (306)
T KOG2882|consen 36 GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS-----VKEENI--FSSA-YAIADYLKKRKPFGK 107 (306)
T ss_pred cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc-----cCcccc--cChH-HHHHHHHHHhCcCCC
Confidence 45789999999999999999999999998776665552 3455532 111111 1122 222222333333345
Q ss_pred cEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 167 SSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 167 e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
.+.++|-.. =-+-.+++|+.......
T Consensus 108 ~Vyvig~~g-i~~eL~~aG~~~~g~~~ 133 (306)
T KOG2882|consen 108 KVYVIGEEG-IREELDEAGFEYFGGGP 133 (306)
T ss_pred eEEEecchh-hhHHHHHcCceeecCCC
Confidence 677776544 23446778877666554
No 250
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=67.34 E-value=9.2 Score=41.01 Aligned_cols=35 Identities=14% Similarity=0.239 Sum_probs=29.2
Q ss_pred CCCchHHHHHHHHHHC-CCCEEEEeCCChHHHHHHH
Q 016755 91 KALPGANRLIKHLSCH-GVPMALASNSHRATIESKI 125 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~-G~~~~i~s~~~~~~i~~~l 125 (383)
.+.|++.++|+.|.+. +-.++|+|+.+.+.++..+
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~ 567 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNF 567 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHh
Confidence 4567888889998775 5679999999999999888
No 251
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=66.04 E-value=11 Score=33.19 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=32.5
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
+.|...+.+++|++.|++++++|+.+...+...+ +.+++.
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~-~~l~~~ 58 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALA-VLIGTS 58 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHH-HHhCCC
Confidence 3345678899999999999999999988888777 667764
No 252
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=65.40 E-value=13 Score=32.90 Aligned_cols=41 Identities=17% Similarity=0.104 Sum_probs=32.9
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~ 133 (383)
+.|...+.|++|++.|++++++|+.+...+...+ +.+++..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~ 61 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAA-KLIGTSG 61 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH-HHhCCCC
Confidence 3345677889999999999999999998888777 6677653
No 253
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=65.07 E-value=9.3 Score=41.23 Aligned_cols=40 Identities=15% Similarity=-0.011 Sum_probs=33.0
Q ss_pred CCCCChHHHHHHHH---HcCCCCCcEEEEecChhhhHHHHhcC
Q 016755 146 TGKPSPDIFLEAAK---RLNMEPSSSLVIEDSVIGVVAGKAAG 185 (383)
Q Consensus 146 ~~kp~p~~~~~~~~---~lg~~p~e~l~VGDs~~Di~~a~~aG 185 (383)
.+..|..+++.+++ .+|++++.+++|||..||..|.+.++
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 34556777887764 46899999999999999999999876
No 254
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=65.06 E-value=7.5 Score=40.91 Aligned_cols=31 Identities=23% Similarity=0.056 Sum_probs=26.6
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
-..-++|-||+.||+-+.+.|...+...+..
T Consensus 805 ~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~ 835 (1160)
T KOG0209|consen 805 LGYVTLMCGDGTNDVGALKQAHVGVALLNNP 835 (1160)
T ss_pred cCeEEEEecCCCcchhhhhhcccceehhcCC
Confidence 3456999999999999999999988887664
No 255
>PF08057 Ery_res_leader2: Erythromycin resistance leader peptide; InterPro: IPR012559 This family consists of erythromycin resistance gene leader peptides. These leader peptides are involved in the transcriptional attenuation control of the synthesis of the macrolide-lincosamide -streptogramin B resistance protein. It acts as a transcriptional attenuator, in contrast to other inducible erm genes. The mRNA leader sequence can fold in either of two mutually exclusive conformations, one of which is postulated to form in the absence of induction, and to contain two rho factor-independent terminators [].; GO: 0046677 response to antibiotic
Probab=64.79 E-value=2.4 Score=19.36 Aligned_cols=8 Identities=50% Similarity=0.630 Sum_probs=6.6
Q ss_pred cCCccccc
Q 016755 254 LGIPTANL 261 (383)
Q Consensus 254 lg~ptaN~ 261 (383)
|-|||.|.
T Consensus 7 lrfptlnq 14 (14)
T PF08057_consen 7 LRFPTLNQ 14 (14)
T ss_pred eeccccCC
Confidence 78999883
No 256
>PLN02151 trehalose-phosphatase
Probab=64.33 E-value=3.9 Score=39.11 Aligned_cols=38 Identities=13% Similarity=-0.094 Sum_probs=29.8
Q ss_pred CCCChHHHHHHHHHcCCCCC---cEEEEecChhhhHHHHhc
Q 016755 147 GKPSPDIFLEAAKRLNMEPS---SSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~p~---e~l~VGDs~~Di~~a~~a 184 (383)
+..|..++..++++++.... -.+|+||-.+|-.+.+.+
T Consensus 267 ~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L 307 (354)
T PLN02151 267 KWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKIL 307 (354)
T ss_pred CCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHH
Confidence 34567889999998886533 289999999999888754
No 257
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=62.71 E-value=15 Score=33.12 Aligned_cols=38 Identities=16% Similarity=0.354 Sum_probs=31.2
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
+...+.+++|+++|+.++++|+.+...+...+ +.+++.
T Consensus 19 ~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~-~~~~~~ 56 (256)
T TIGR00099 19 PSTKEALAKLREKGIKVVLATGRPYKEVKNIL-KELGLD 56 (256)
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCC
Confidence 34567889999999999999999988887777 666664
No 258
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=60.09 E-value=16 Score=33.33 Aligned_cols=39 Identities=8% Similarity=0.129 Sum_probs=32.0
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~ 133 (383)
+...+.+++|+++|+.++++|+.+...+...+ +.+++..
T Consensus 22 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~ 60 (272)
T PRK15126 22 EKTLSTLARLRERDITLTFATGRHVLEMQHIL-GALSLDA 60 (272)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCCC
Confidence 34567889999999999999999998888777 6677653
No 259
>PTZ00445 p36-lilke protein; Provisional
Probab=59.74 E-value=8.3 Score=33.95 Aligned_cols=16 Identities=19% Similarity=0.235 Sum_probs=14.7
Q ss_pred CCccEEEEecCCcccc
Q 016755 7 KLMSCVILDLDGTLLN 22 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d 22 (383)
..||+|++|+|.||+.
T Consensus 41 ~GIk~Va~D~DnTlI~ 56 (219)
T PTZ00445 41 CGIKVIASDFDLTMIT 56 (219)
T ss_pred cCCeEEEecchhhhhh
Confidence 4799999999999998
No 260
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=59.00 E-value=91 Score=25.20 Aligned_cols=98 Identities=21% Similarity=0.248 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHCCCCEEEEeCCChHHHHHHH-H---hhcCCcccCc-EEEeCCCC--C---CCCCChHHHHHHHHHcCCC
Q 016755 95 GANRLIKHLSCHGVPMALASNSHRATIESKI-S---YQHGWNESFS-VIVGSDEV--R---TGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l-~---~~~gl~~~f~-~i~~~~~~--~---~~kp~p~~~~~~~~~lg~~ 164 (383)
.+.+++....++|-++.++-++....+...+ . ...+...... .+....+. . ..-..+..-..+++.+.+.
T Consensus 23 ~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (138)
T PF13580_consen 23 KAADLIAEALRNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIALNDDALTAISNDLEYDEGFARQLLALYDIR 102 (138)
T ss_dssp HHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEETTSTHHHHHHHHTTGGGTHHHHHHHHTT--
T ss_pred HHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCcccccccccccchHhhhhcccchhhHHHHHHHHHcCCC
Confidence 4455555555677778887777554332222 1 2334443333 33333322 0 1112345556667777889
Q ss_pred CCcEEEE----ecChhhhH---HHHhcCCEEEEec
Q 016755 165 PSSSLVI----EDSVIGVV---AGKAAGMEVVAVP 192 (383)
Q Consensus 165 p~e~l~V----GDs~~Di~---~a~~aG~~~i~v~ 192 (383)
|.+++++ |.+++=++ .|++.|+.+|.++
T Consensus 103 ~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 103 PGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 9998876 56666444 4677799998874
No 261
>PRK10976 putative hydrolase; Provisional
Probab=58.58 E-value=18 Score=32.91 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=31.3
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
|...+.+++++++|++++++|+.+...+...+ +.+++.
T Consensus 22 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~ 59 (266)
T PRK10976 22 PYAKETLKLLTARGIHFVFATGRHHVDVGQIR-DNLEIK 59 (266)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HhcCCC
Confidence 34567789999999999999999998887777 667764
No 262
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=58.49 E-value=10 Score=36.96 Aligned_cols=17 Identities=35% Similarity=0.565 Sum_probs=14.6
Q ss_pred CccEEEEecCCcccccH
Q 016755 8 LMSCVILDLDGTLLNTD 24 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~ 24 (383)
..+.|++|+||||+.++
T Consensus 374 n~kiVVsDiDGTITkSD 390 (580)
T COG5083 374 NKKIVVSDIDGTITKSD 390 (580)
T ss_pred CCcEEEEecCCcEEehh
Confidence 56789999999999774
No 263
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=58.39 E-value=37 Score=31.59 Aligned_cols=38 Identities=16% Similarity=0.252 Sum_probs=31.9
Q ss_pred ccCCCCchHHHHHHHHHHCC-CCEEEEeCCChHHHHHHH
Q 016755 88 CKVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKI 125 (383)
Q Consensus 88 ~~~~~~pg~~~lL~~L~~~G-~~~~i~s~~~~~~i~~~l 125 (383)
....++|...++++.+++.| ++++++||+....+...+
T Consensus 89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~~L 127 (296)
T COG0731 89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLEEL 127 (296)
T ss_pred CCcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHHHh
Confidence 35789999999999999999 799999999985554444
No 264
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=58.26 E-value=21 Score=32.36 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=30.4
Q ss_pred HHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 96 ANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
..+.++.|+++|++++++|+.+...+...+ +.+++.
T Consensus 21 ~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~-~~~~~~ 56 (256)
T TIGR01486 21 AKEVLERLQELGIPVIPCTSKTAAEVEYLR-KELGLE 56 (256)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCC
Confidence 467788899999999999999999888877 667764
No 265
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=57.90 E-value=16 Score=32.07 Aligned_cols=88 Identities=18% Similarity=0.299 Sum_probs=51.5
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHH---HHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATI---ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i---~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
..||+.+.|+.|+.++.++-++||...+.- ...| .++|+.---+.|+ .|.|. -...+++-++.| .
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL-~rlgf~v~eeei~--------tsl~a-a~~~~~~~~lrP--~ 91 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL-QRLGFDVSEEEIF--------TSLPA-ARQYLEENQLRP--Y 91 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH-HHhCCCccHHHhc--------CccHH-HHHHHHhcCCCc--e
Confidence 678999999999999999999999876643 3334 4566532212222 22222 233445555543 4
Q ss_pred EEEecCh-hhhHHHHhcCCEEEEe
Q 016755 169 LVIEDSV-IGVVAGKAAGMEVVAV 191 (383)
Q Consensus 169 l~VGDs~-~Di~~a~~aG~~~i~v 191 (383)
+.|.|.. .|...-....-.++++
T Consensus 92 l~v~d~a~~dF~gidTs~pn~VVi 115 (262)
T KOG3040|consen 92 LIVDDDALEDFDGIDTSDPNCVVI 115 (262)
T ss_pred EEEcccchhhCCCccCCCCCeEEE
Confidence 6666665 4655544443334433
No 266
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=57.83 E-value=6.9 Score=32.31 Aligned_cols=15 Identities=40% Similarity=0.713 Sum_probs=13.1
Q ss_pred cEEEEecCCcccccH
Q 016755 10 SCVILDLDGTLLNTD 24 (383)
Q Consensus 10 k~viFDlDGTL~d~~ 24 (383)
+.+++|+||||+++.
T Consensus 3 ~~lvldld~tl~~~~ 17 (148)
T smart00577 3 KTLVLDLDETLVHST 17 (148)
T ss_pred cEEEEeCCCCeECCC
Confidence 578999999999874
No 267
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=57.40 E-value=19 Score=31.65 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=30.2
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
|...+.|+++++.|++++++|+.+...+...+ +.+++.
T Consensus 18 ~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~-~~l~~~ 55 (225)
T TIGR01482 18 ESALEAIRKAESVGIPVVLVTGNSVQFARALA-KLIGTP 55 (225)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH-HHhCCC
Confidence 34456788899999999999999988888777 666643
No 268
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=57.39 E-value=20 Score=33.44 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=31.3
Q ss_pred HHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc
Q 016755 96 ANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~ 133 (383)
+.+.|++|+++|++++++|+.....+..+. +.+++..
T Consensus 23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~-~~Lgl~~ 59 (302)
T PRK12702 23 ARQALAALERRSIPLVLYSLRTRAQLEHLC-RQLRLEH 59 (302)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHhCCCC
Confidence 467789999999999999999988888777 6778754
No 269
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=56.36 E-value=21 Score=32.39 Aligned_cols=38 Identities=11% Similarity=0.164 Sum_probs=31.0
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
|...+.+++++++|+.++++|+.+...+...+ +.+++.
T Consensus 23 ~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~-~~l~~~ 60 (272)
T PRK10530 23 PESLEALARAREAGYKVIIVTGRHHVAIHPFY-QALALD 60 (272)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HhcCCC
Confidence 34467788999999999999999988887777 667764
No 270
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=56.34 E-value=15 Score=36.76 Aligned_cols=39 Identities=21% Similarity=0.201 Sum_probs=25.6
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 142 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~ 142 (383)
..+.++.-| +.+++|..|+..++..+.+++|. |.|++.+
T Consensus 138 ~~~v~~~~~-~~~vv~~~PrvMve~Flkeyl~~----d~V~g~E 176 (525)
T PLN02588 138 MFQVLKRGG-KRVGVSDLPQVMIDVFLRDYLEI----EVVVGRD 176 (525)
T ss_pred HHHHHhhcC-cEEEEecCCHHHHHHHHHHhcCc----ceEeeee
Confidence 334444434 45566669999999999888887 5555443
No 271
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=56.00 E-value=22 Score=32.22 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=34.2
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~ 133 (383)
..+...+.|++++++|++++++|+.+...+...+ +.+++..
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~-~~l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSIL-EELGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHH-HHcCCCc
Confidence 3455678889999999999999999998888888 7777754
No 272
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=53.86 E-value=41 Score=32.27 Aligned_cols=76 Identities=21% Similarity=0.221 Sum_probs=52.2
Q ss_pred EEEeCCChH-HHHHHHHhhcCCcccC--cEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCE
Q 016755 111 ALASNSHRA-TIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 111 ~i~s~~~~~-~i~~~l~~~~gl~~~f--~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~ 187 (383)
+++|+..-- .+...| ..||...| ..|++... .++-..|+.+.+|+|- .-.-++|||+.....+|++..|+
T Consensus 374 VlvTttqLipalaKvL--L~gLg~~fpiENIYSa~k----iGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~P 446 (468)
T KOG3107|consen 374 VLVTTTQLIPALAKVL--LYGLGSSFPIENIYSATK----IGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMP 446 (468)
T ss_pred EEEeccchhHHHHHHH--HHhcCCcccchhhhhhhh----ccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCc
Confidence 455654322 222223 34665444 34554433 2346789999999998 67788999999999999999999
Q ss_pred EEEecC
Q 016755 188 VVAVPS 193 (383)
Q Consensus 188 ~i~v~~ 193 (383)
+.-+..
T Consensus 447 fwrI~~ 452 (468)
T KOG3107|consen 447 FWRISS 452 (468)
T ss_pred eEeecc
Confidence 988866
No 273
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=53.44 E-value=40 Score=35.12 Aligned_cols=114 Identities=14% Similarity=0.003 Sum_probs=60.8
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHH-hhcCCcccCcEEEeCCCCCCCCC--ChHHHHHHHHHcCCCCCc
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKIS-YQHGWNESFSVIVGSDEVRTGKP--SPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~-~~~gl~~~f~~i~~~~~~~~~kp--~p~~~~~~~~~lg~~p~e 167 (383)
.-..++..-|..|+.++....++++..-++.-.... +...+..-...+++. ...| +..+.+.+-++-| ..
T Consensus 711 ~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~C----RctPtQKA~v~~llq~~t~---kr 783 (1051)
T KOG0210|consen 711 TSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCC----RCTPTQKAQVVRLLQKKTG---KR 783 (1051)
T ss_pred CCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEE----ecChhHHHHHHHHHHHhhC---ce
Confidence 334467777777887766666666655444333221 112221112344443 1223 3444444434433 78
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
+..|||+-||+.|.+.|.+.+-.+..... +..-.+|+-|.....
T Consensus 784 vc~IGDGGNDVsMIq~A~~GiGI~gkEGk--QASLAADfSItqF~H 827 (1051)
T KOG0210|consen 784 VCAIGDGGNDVSMIQAADVGIGIVGKEGK--QASLAADFSITQFSH 827 (1051)
T ss_pred EEEEcCCCccchheeecccceeeeccccc--ccchhccccHHHHHH
Confidence 99999999999999888775544433222 122234555554443
No 274
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=51.62 E-value=8.6 Score=32.34 Aligned_cols=14 Identities=43% Similarity=0.764 Sum_probs=12.5
Q ss_pred cEEEEecCCccccc
Q 016755 10 SCVILDLDGTLLNT 23 (383)
Q Consensus 10 k~viFDlDGTL~d~ 23 (383)
+.+++|+|+||+.+
T Consensus 2 ~~lvlDLDeTLi~~ 15 (162)
T TIGR02251 2 KTLVLDLDETLVHS 15 (162)
T ss_pred cEEEEcCCCCcCCC
Confidence 47899999999987
No 275
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=48.76 E-value=32 Score=31.43 Aligned_cols=36 Identities=22% Similarity=0.215 Sum_probs=30.6
Q ss_pred HHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 96 ANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
..+.+++|+++|++++++|+.+...+...+ +.+++.
T Consensus 29 ~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~-~~l~~~ 64 (271)
T PRK03669 29 AAPWLTRLREAQVPVILCSSKTAAEMLPLQ-QTLGLQ 64 (271)
T ss_pred HHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHhCCC
Confidence 456788999999999999999999888887 677764
No 276
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=46.94 E-value=13 Score=31.05 Aligned_cols=17 Identities=41% Similarity=0.538 Sum_probs=13.9
Q ss_pred CccEEEEecCCcccccH
Q 016755 8 LMSCVILDLDGTLLNTD 24 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~ 24 (383)
+-..+++|||.||+.+.
T Consensus 5 ~kl~LVLDLDeTLihs~ 21 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTT 21 (156)
T ss_pred CceEEEEeCCCCccccc
Confidence 34578999999999874
No 277
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=46.78 E-value=25 Score=31.37 Aligned_cols=40 Identities=20% Similarity=0.092 Sum_probs=27.4
Q ss_pred CCCChHHHHHHHHHcCCC---CCcEEEEecChhhhHHHHhcCC
Q 016755 147 GKPSPDIFLEAAKRLNME---PSSSLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~---p~e~l~VGDs~~Di~~a~~aG~ 186 (383)
+..|..+++.++++++.. +.-++++||..+|-.+.+.+.-
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~ 205 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRE 205 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTT
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHh
Confidence 334678899999988876 7889999999999999887654
No 278
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=46.18 E-value=2.7e+02 Score=26.44 Aligned_cols=23 Identities=22% Similarity=0.551 Sum_probs=18.2
Q ss_pred cEEEeCCCCCCCCCChHHHHHHHHHc
Q 016755 136 SVIVGSDEVRTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 136 ~~i~~~~~~~~~kp~p~~~~~~~~~l 161 (383)
+.|..|+. |.-+|++|.+..+.+
T Consensus 279 kfvLVGDs---GE~DpeIYae~v~~f 301 (373)
T COG4850 279 KFVLVGDS---GEHDPEIYAEMVRCF 301 (373)
T ss_pred eEEEecCC---CCcCHHHHHHHHHhC
Confidence 67888875 677999999887654
No 279
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=46.13 E-value=16 Score=32.59 Aligned_cols=11 Identities=55% Similarity=0.751 Sum_probs=7.4
Q ss_pred EEecCCccccc
Q 016755 13 ILDLDGTLLNT 23 (383)
Q Consensus 13 iFDlDGTL~d~ 23 (383)
+||+||||.+.
T Consensus 1 ~lDyDGTL~p~ 11 (235)
T PF02358_consen 1 FLDYDGTLAPI 11 (235)
T ss_dssp EEE-TTTSS--
T ss_pred CcccCCccCCC
Confidence 68999999965
No 280
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=45.32 E-value=1.9e+02 Score=25.13 Aligned_cols=90 Identities=16% Similarity=0.163 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHCCCCEE-EEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEec
Q 016755 95 GANRLIKHLSCHGVPMA-LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~-i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGD 173 (383)
|..-+...++..|+++. +-++.+.+.+...+ ...+. +.|..+.-.....+...-+...+++.+..+.-.++||-
T Consensus 100 G~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~-~~~~p----d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG 174 (197)
T TIGR02370 100 GKNIVVTMLRANGFDVIDLGRDVPIDTVVEKV-KKEKP----LMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGG 174 (197)
T ss_pred HHHHHHHHHHhCCcEEEECCCCCCHHHHHHHH-HHcCC----CEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 44445556777888876 44444544444444 22222 56655554444444445555566677777777788888
Q ss_pred ChhhhHHHHhcCCEEE
Q 016755 174 SVIGVVAGKAAGMEVV 189 (383)
Q Consensus 174 s~~Di~~a~~aG~~~i 189 (383)
..-.-..+++.|....
T Consensus 175 ~~~~~~~~~~~gad~~ 190 (197)
T TIGR02370 175 APVTQDWADKIGADVY 190 (197)
T ss_pred hhcCHHHHHHhCCcEE
Confidence 8855567788877543
No 281
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=43.83 E-value=33 Score=32.22 Aligned_cols=51 Identities=22% Similarity=0.160 Sum_probs=36.7
Q ss_pred CCCCCChHHHHHH-------HHHcC--CCCCcEEEEecCh-hhhHHHH---------------hcCCEEEEecCCC
Q 016755 145 RTGKPSPDIFLEA-------AKRLN--MEPSSSLVIEDSV-IGVVAGK---------------AAGMEVVAVPSLP 195 (383)
Q Consensus 145 ~~~kp~p~~~~~~-------~~~lg--~~p~e~l~VGDs~-~Di~~a~---------------~aG~~~i~v~~~~ 195 (383)
..|||.+-.|..+ .++.+ .++....+|||.+ .|+..|. ..|+..|.|.++-
T Consensus 268 t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV 343 (389)
T KOG1618|consen 268 TLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGV 343 (389)
T ss_pred ccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeee
Confidence 5789976555444 32233 2567899999999 7999996 6678888888763
No 282
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=42.50 E-value=2.6e+02 Score=25.23 Aligned_cols=87 Identities=15% Similarity=0.246 Sum_probs=55.2
Q ss_pred HHHHHHC-CCCEEEEeCCCh---HHHHHHHHhhc-CCcccCcEEE-eCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEec
Q 016755 100 IKHLSCH-GVPMALASNSHR---ATIESKISYQH-GWNESFSVIV-GSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173 (383)
Q Consensus 100 L~~L~~~-G~~~~i~s~~~~---~~i~~~l~~~~-gl~~~f~~i~-~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGD 173 (383)
|.+...+ ++.+.+++.+.. +.++......+ .+.+ |.++ .+.+ ..-|-|..-+++++..|+ .|++|||
T Consensus 23 lDErAdRedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~p--Df~i~isPN--~a~PGP~~ARE~l~~~~i---P~IvI~D 95 (277)
T PRK00994 23 LDERADREDIDVRVVGSGAKMGPEEVEEVVKKMLEEWKP--DFVIVISPN--PAAPGPKKAREILKAAGI---PCIVIGD 95 (277)
T ss_pred HHhhhcccCceEEEeccCCCCCHHHHHHHHHHHHHhhCC--CEEEEECCC--CCCCCchHHHHHHHhcCC---CEEEEcC
Confidence 3343333 688888877642 33333331221 3333 4443 3332 356778888888888887 5999999
Q ss_pred Ch--hhhHHHHhcCCEEEEecC
Q 016755 174 SV--IGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 174 s~--~Di~~a~~aG~~~i~v~~ 193 (383)
.+ .+....++.|+..+.+..
T Consensus 96 ~p~~K~~d~l~~~g~GYIivk~ 117 (277)
T PRK00994 96 APGKKVKDAMEEQGLGYIIVKA 117 (277)
T ss_pred CCccchHHHHHhcCCcEEEEec
Confidence 99 367888888998888765
No 283
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=40.69 E-value=32 Score=35.59 Aligned_cols=55 Identities=18% Similarity=0.093 Sum_probs=42.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCC-cccC-cEEEeCCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESF-SVIVGSDEVR 145 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl-~~~f-~~i~~~~~~~ 145 (383)
.+++.|++.++|+.+.+. |.+.+.|.+.+.+...++ +.+.- ..+| +.|++.++..
T Consensus 199 ~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~-~liDP~~~lF~dRIisrde~~ 255 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIA-KLIDPEGKYFGDRIISRDESP 255 (635)
T ss_pred EEEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHH-HHhCCCCccccceEEEecCCC
Confidence 467899999999999987 999999999999988776 43332 2344 5778777743
No 284
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=40.11 E-value=18 Score=31.04 Aligned_cols=17 Identities=35% Similarity=0.526 Sum_probs=14.1
Q ss_pred ccEEEEecCCcccccHH
Q 016755 9 MSCVILDLDGTLLNTDG 25 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~ 25 (383)
.++|++|-||||.....
T Consensus 5 ~k~lflDRDGtin~d~~ 21 (181)
T COG0241 5 QKALFLDRDGTINIDKG 21 (181)
T ss_pred CcEEEEcCCCceecCCC
Confidence 67999999999986533
No 285
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=39.93 E-value=73 Score=29.41 Aligned_cols=15 Identities=47% Similarity=0.709 Sum_probs=13.3
Q ss_pred ccEEEEecCCccccc
Q 016755 9 MSCVILDLDGTLLNT 23 (383)
Q Consensus 9 ik~viFDlDGTL~d~ 23 (383)
.++++||+||||.+.
T Consensus 158 ~~~~~~D~dgtl~~~ 172 (300)
T PHA02530 158 PKAVIFDIDGTLAKM 172 (300)
T ss_pred CCEEEEECCCcCcCC
Confidence 578999999999975
No 286
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=35.15 E-value=4e+02 Score=25.28 Aligned_cols=97 Identities=9% Similarity=0.103 Sum_probs=63.9
Q ss_pred cCCCCchHHHHHHHHHHC---CCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEe-CCCCC--CCCCChHHHHHHHHHcC
Q 016755 89 KVKALPGANRLIKHLSCH---GVPMALASNSHRATIESKISYQHGWNESFSVIVG-SDEVR--TGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~---G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~-~~~~~--~~kp~p~~~~~~~~~lg 162 (383)
...++|+..++++..+.. |+.+..+++.+.....+.. .+|. ..+-- +...+ .+-.+|+.++.+.+...
T Consensus 176 ~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~--~~g~----~avmPl~~pIGsg~gv~~p~~i~~~~e~~~ 249 (326)
T PRK11840 176 AKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLE--DAGA----VAVMPLGAPIGSGLGIQNPYTIRLIVEGAT 249 (326)
T ss_pred CCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH--hcCC----EEEeeccccccCCCCCCCHHHHHHHHHcCC
Confidence 345778888887776665 9998666665555444333 3444 22222 33333 33448999999988833
Q ss_pred CCCCcEEEEecCh---hhhHHHHhcCCEEEEecCCC
Q 016755 163 MEPSSSLVIEDSV---IGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 163 ~~p~e~l~VGDs~---~Di~~a~~aG~~~i~v~~~~ 195 (383)
--+.+|-+. .|+..|-+.|+..+.++.+-
T Consensus 250 ----vpVivdAGIg~~sda~~AmelGadgVL~nSaI 281 (326)
T PRK11840 250 ----VPVLVDAGVGTASDAAVAMELGCDGVLMNTAI 281 (326)
T ss_pred ----CcEEEeCCCCCHHHHHHHHHcCCCEEEEccee
Confidence 346777655 69999999999999998853
No 287
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=34.94 E-value=24 Score=24.46 Aligned_cols=25 Identities=8% Similarity=0.177 Sum_probs=14.5
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHH
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~ 182 (383)
.+..++++|+ .+++||...|+++..
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 3556777776 789999999998864
No 288
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=34.91 E-value=2.7e+02 Score=27.21 Aligned_cols=57 Identities=9% Similarity=0.068 Sum_probs=43.3
Q ss_pred CCCHHHHHHHHHHHHHhhhccCCCCchH-HHHHHHHHHCCCCEEEEeCCChHHHHHHH
Q 016755 69 PCAKHEFVNEVYSMFSDHLCKVKALPGA-NRLIKHLSCHGVPMALASNSHRATIESKI 125 (383)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~-~~lL~~L~~~G~~~~i~s~~~~~~i~~~l 125 (383)
+.+.+.+++.+.++..+......+.-|+ .+.++.+++.|--..++|-+..-...+.+
T Consensus 136 ~mt~d~~~~~ie~qa~dGVDfmTiH~Gi~~~~~~~~~~~~R~~giVSRGGs~~~~WM~ 193 (423)
T TIGR00190 136 DMDEDDMFRAIEKQAKDGVDFMTIHAGVLLEYVERLKRSGRITGIVSRGGAILAAWML 193 (423)
T ss_pred hCCHHHHHHHHHHHHHhCCCEEEEccchhHHHHHHHHhCCCccCeecCcHHHHHHHHH
Confidence 4567888888888888887778888886 78999999887777888887655444433
No 289
>COG1964 Predicted Fe-S oxidoreductases [General function prediction only]
Probab=34.64 E-value=1.8e+02 Score=28.84 Aligned_cols=133 Identities=18% Similarity=0.173 Sum_probs=77.7
Q ss_pred cCCCCchHHHHHHHHHHCCC-CEEEEeCCCh-----HHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 89 KVKALPGANRLIKHLSCHGV-PMALASNSHR-----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~-~~~i~s~~~~-----~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
...+..++.++++..++.|+ .+.+.||+-+ ++.. .+ +..|+ ..++-+.|--..++.+..+..+-.
T Consensus 120 EPTvr~DL~eiv~~a~e~g~~hVqinTnGirlA~~~~~~~-~l-~~ag~----~tvYlsFDG~~e~~~~~~~~eIk~--- 190 (475)
T COG1964 120 EPTLRDDLIEIIKIAREEGYDHVQLNTNGIRLAFDPEYVK-KL-REAGV----NTVYLSFDGVTPKTNWKNHWEIKQ--- 190 (475)
T ss_pred CccchhhHHHHHHHHhhcCccEEEEccCceeeccCHHHHH-HH-HhcCC----cEEEEecCCCCCCchhhHhhhhHH---
Confidence 45667789999999999998 5778888743 3332 33 34454 677777776667777666444322
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCE-EEEecCCCCccccccccchhhccc-cccCccccCCCCCcccccCCCCCCceeee
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGME-VVAVPSLPKQTHRYTAADEVINSL-LDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~-~i~v~~~~~~~~~~~~a~~vi~~l-~e~~~~~~~l~~~~~~la~~llg~p~~~~ 240 (383)
-++.++++|.. +++|+........... -.+|+-. ...+. .+...-.|++++
T Consensus 191 --------------alen~r~~g~~svVLVptl~rgvNd~~l-G~iirfa~~n~dv------------VrgVnfQPVslt 243 (475)
T COG1964 191 --------------ALENCRKAGLPSVVLVPTLIRGVNDHEL-GAIIRFALNNIDV------------VRGVNFQPVSLT 243 (475)
T ss_pred --------------HHHHHHhcCCCcEEEEeehhcccChHHH-HHHHHHHHhcccc------------ccccceEEEEEe
Confidence 24558899987 6677763211111001 1233222 22221 333446799999
Q ss_pred eeeeecccCCCcccCCcc
Q 016755 241 GPVVKGLGRGSKVLGIPT 258 (383)
Q Consensus 241 G~v~~G~~~g~~~lg~pt 258 (383)
|.+..-...-.+ |=.|-
T Consensus 244 Gr~~~~~r~~~R-ITIPd 260 (475)
T COG1964 244 GRMPQKERERFR-ITIPD 260 (475)
T ss_pred cccchhhhhheE-eechh
Confidence 999876554333 54443
No 290
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=33.75 E-value=1.8e+02 Score=27.07 Aligned_cols=27 Identities=26% Similarity=0.433 Sum_probs=22.1
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCChH
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHRA 119 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~~ 119 (383)
.||+..+-+.|+..|.++.++|.....
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~~ 88 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERCA 88 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHHH
Confidence 358889999999999999999976543
No 291
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=33.65 E-value=4.7e+02 Score=25.69 Aligned_cols=57 Identities=11% Similarity=0.084 Sum_probs=43.9
Q ss_pred CCCHHHHHHHHHHHHHhhhccCCCCchH-HHHHHHHHHCCCCEEEEeCCChHHHHHHH
Q 016755 69 PCAKHEFVNEVYSMFSDHLCKVKALPGA-NRLIKHLSCHGVPMALASNSHRATIESKI 125 (383)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~-~~lL~~L~~~G~~~~i~s~~~~~~i~~~l 125 (383)
+.+.+.+++.+.++..+..+...+.-|+ .+.++.+++.+--+.++|-+..-...+.+
T Consensus 139 ~mt~d~~~~~ie~qa~~GVDfmTiHcGi~~~~~~~~~~~~R~~giVSRGGs~~~~WM~ 196 (431)
T PRK13352 139 DMTEDDLFDVIEKQAKDGVDFMTIHCGVTRETLERLKKSGRIMGIVSRGGSFLAAWML 196 (431)
T ss_pred hCCHHHHHHHHHHHHHhCCCEEEEccchhHHHHHHHHhcCCccCeecCCHHHHHHHHH
Confidence 3567888888888888888888888886 78999999887778888887655444433
No 292
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=33.20 E-value=2.1e+02 Score=28.91 Aligned_cols=101 Identities=13% Similarity=0.209 Sum_probs=56.8
Q ss_pred cCCCCchHHHHHHHHHHCC--CCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHH-cC---
Q 016755 89 KVKALPGANRLIKHLSCHG--VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR-LN--- 162 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G--~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~-lg--- 162 (383)
.++..|.+.+.+..+...+ +...++ ......... +.++....-..++.+.....|++..+-+...+.. .+
T Consensus 127 ~Cp~Cp~~v~~~~~~a~~~~~i~~~~i---d~~~~~~~~-~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~ 202 (517)
T PRK15317 127 SCHNCPDVVQALNLMAVLNPNITHTMI---DGALFQDEV-EARNIMAVPTVFLNGEEFGQGRMTLEEILAKLDTGAAARA 202 (517)
T ss_pred CCCCcHHHHHHHHHHHHhCCCceEEEE---EchhCHhHH-HhcCCcccCEEEECCcEEEecCCCHHHHHHHHhccccccc
Confidence 3455567777776666542 222222 111122223 4555554434444444455666665545444432 12
Q ss_pred ------CCCCcEEEEecChhhhHHHH---hcCCEEEEecC
Q 016755 163 ------MEPSSSLVIEDSVIGVVAGK---AAGMEVVAVPS 193 (383)
Q Consensus 163 ------~~p~e~l~VGDs~~Di~~a~---~aG~~~i~v~~ 193 (383)
...-+++.||-++..+.+|. +.|.+++++..
T Consensus 203 ~~~~~~~~~~dvvIIGgGpaGl~aA~~la~~G~~v~li~~ 242 (517)
T PRK15317 203 AEELNAKDPYDVLVVGGGPAGAAAAIYAARKGIRTGIVAE 242 (517)
T ss_pred hhhcccCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEec
Confidence 23458999999999988875 45888888854
No 293
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=31.23 E-value=41 Score=35.82 Aligned_cols=98 Identities=14% Similarity=0.135 Sum_probs=55.5
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHH----------------HhhcCCc-----cc-C-cEEEeCCCCCCC
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKI----------------SYQHGWN-----ES-F-SVIVGSDEVRTG 147 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l----------------~~~~gl~-----~~-f-~~i~~~~~~~~~ 147 (383)
+|.+.+.+.+..+++.|+++.++|+-......... .++.+.. .. - ..|+.|.+...-
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~ 669 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDM 669 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccccc
Confidence 35567788899999999999988876433222211 0222110 00 0 123444433211
Q ss_pred CCChHHHHHHHHHcC------CCC--------------CcEEEEecChhhhHHHHhcCCEEEE
Q 016755 148 KPSPDIFLEAAKRLN------MEP--------------SSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 148 kp~p~~~~~~~~~lg------~~p--------------~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
.++-+.++++... .+| +-+.+.||+.||-.|.++|.+.+++
T Consensus 670 --~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAM 730 (1019)
T KOG0203|consen 670 --SSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 730 (1019)
T ss_pred --CHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceee
Confidence 2344444444332 122 3366789999999999999987665
No 294
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=31.09 E-value=1e+02 Score=27.65 Aligned_cols=44 Identities=9% Similarity=0.007 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEe
Q 016755 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG 140 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~ 140 (383)
...++++.++++|+.++++|+.+...+...+ +.+++.. .+.+++
T Consensus 25 ~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~-~~~~~~~-p~~~I~ 68 (249)
T TIGR01485 25 RLNALLEDHRGEDSLLVYSTGRSPHSYKELQ-KQKPLLT-PDIWVT 68 (249)
T ss_pred HHHHHHHHhhccCceEEEEcCCCHHHHHHHH-hcCCCCC-CCEEEE
Confidence 3456778888899999999999988888776 5555533 244444
No 295
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=29.72 E-value=2.7e+02 Score=28.16 Aligned_cols=101 Identities=15% Similarity=0.279 Sum_probs=57.8
Q ss_pred cCCCCchHHHHHHHHHHCC--CCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHc-----
Q 016755 89 KVKALPGANRLIKHLSCHG--VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL----- 161 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G--~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~l----- 161 (383)
.++..|.+.+.+..+.... +...++- ........ +.++....-..++.+.....|++..+.+...+...
T Consensus 128 ~Cp~Cp~~v~~~~~~a~~~p~i~~~~id---~~~~~~~~-~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~l~~~~~~~~ 203 (515)
T TIGR03140 128 TCQNCPDVVQALNQMALLNPNISHTMID---GALFQDEV-EALGIQGVPAVFLNGEEFHNGRMDLAELLEKLEETAGVEA 203 (515)
T ss_pred CCCCCHHHHHHHHHHHHhCCCceEEEEE---chhCHHHH-HhcCCcccCEEEECCcEEEecCCCHHHHHHHHhhccCccc
Confidence 3455677777777666542 2222221 11122233 44555544344455555566777665554444322
Q ss_pred -----CCCCCcEEEEecChhhhHHHH---hcCCEEEEecC
Q 016755 162 -----NMEPSSSLVIEDSVIGVVAGK---AAGMEVVAVPS 193 (383)
Q Consensus 162 -----g~~p~e~l~VGDs~~Di~~a~---~aG~~~i~v~~ 193 (383)
...+.+++.||-++..+.+|. +.|.+++++..
T Consensus 204 ~~~~~~~~~~dVvIIGgGpAGl~AA~~la~~G~~v~li~~ 243 (515)
T TIGR03140 204 ASALEQLDPYDVLVVGGGPAGAAAAIYAARKGLRTAMVAE 243 (515)
T ss_pred chhccccCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEec
Confidence 244578999999999988874 45888888753
No 296
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=29.15 E-value=1.2e+02 Score=26.07 Aligned_cols=79 Identities=15% Similarity=0.201 Sum_probs=31.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHh----hcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY----QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~----~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
+.++.| .+|..++++|++++++...-.+.-...... .-.+...|+.|.+-++ .-..-+.++|++
T Consensus 103 EtElWP---nll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aqs~---------~da~r~~~lG~~ 170 (186)
T PF04413_consen 103 ETELWP---NLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQSE---------ADAERFRKLGAP 170 (186)
T ss_dssp S----H---HHHHH-----S-EEEEEE--------------HHHHHHGGG-SEEEESSH---------HHHHHHHTTT-S
T ss_pred ccccCH---HHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEECCH---------HHHHHHHHcCCC
Confidence 455555 678888899999999876543221111000 0012234577776653 234456789999
Q ss_pred CCcEEEEecChhhhH
Q 016755 165 PSSSLVIEDSVIGVV 179 (383)
Q Consensus 165 p~e~l~VGDs~~Di~ 179 (383)
++++...||--.|..
T Consensus 171 ~~~v~v~GnlKfd~~ 185 (186)
T PF04413_consen 171 PERVHVTGNLKFDQA 185 (186)
T ss_dssp --SEEE---GGG---
T ss_pred cceEEEeCcchhccc
Confidence 999999999877653
No 297
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=28.53 E-value=4.3e+02 Score=23.65 Aligned_cols=94 Identities=17% Similarity=0.142 Sum_probs=53.5
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCC--hHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHc-CCCCCcEEE
Q 016755 94 PGANRLIKHLSCHGVPMALASNSH--RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLV 170 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~--~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~l-g~~p~e~l~ 170 (383)
+...++++.+++.|++..++-+.. .+.++..+ +.. + ..++.+-+-+.+..-+......++++ ...++..+.
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~-~~~---~--~~l~msv~~~~g~~~~~~~~~~i~~lr~~~~~~~i~ 189 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLS-KLS---P--LFIYYGLRPATGVPLPVSVERNIKRVRNLVGNKYLV 189 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHH-HhC---C--CEEEEEeCCCCCCCchHHHHHHHHHHHHhcCCCCEE
Confidence 467789999999999988776653 34455555 322 1 12222322222322222222222222 222233477
Q ss_pred EecCh---hhhHHHHhcCCEEEEecC
Q 016755 171 IEDSV---IGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 171 VGDs~---~Di~~a~~aG~~~i~v~~ 193 (383)
+|=+. .++..+.++|...+++..
T Consensus 190 v~gGI~~~e~i~~~~~~gaD~vvvGS 215 (244)
T PRK13125 190 VGFGLDSPEDARDALSAGADGVVVGT 215 (244)
T ss_pred EeCCcCCHHHHHHHHHcCCCEEEECH
Confidence 88766 588888889998888766
No 298
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=27.98 E-value=66 Score=31.25 Aligned_cols=18 Identities=28% Similarity=0.200 Sum_probs=15.3
Q ss_pred cCCccEEEEecCCccccc
Q 016755 6 KKLMSCVILDLDGTLLNT 23 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~ 23 (383)
+..|.+|-||||+||...
T Consensus 24 l~~i~~~GfdmDyTL~~Y 41 (424)
T KOG2469|consen 24 LENIGIVGFDMDYTLARY 41 (424)
T ss_pred hhcCcEEeeccccchhhh
Confidence 357899999999999964
No 299
>PF03622 IBV_3B: IBV 3B protein ; InterPro: IPR005295 These proteins are the product of ORF 3B from Infectious bronchitis virus). Currently, the function of this protein remains unknown [].
Probab=27.60 E-value=70 Score=21.79 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCcc-----cccccCCCCccccCCC
Q 016755 344 ETLIAKIHEDRKVAERALDLPL-----YSKYRDDPYLKITSSK 381 (383)
Q Consensus 344 ~~l~~~i~~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 381 (383)
+.++.||.-|.+..-..|+..- .--|+.-||+|+.|+.
T Consensus 12 ~qviqqisf~Lq~ISsvl~t~iFDPFE~cyyrgGsfwEieSad 54 (64)
T PF03622_consen 12 EQVIQQISFNLQHISSVLNTEIFDPFEVCYYRGGSFWEIESAD 54 (64)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCeeEEEEecCcEEEeeccc
Confidence 5788999999999888876533 3678888999887753
No 300
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=27.58 E-value=2.8e+02 Score=28.29 Aligned_cols=88 Identities=7% Similarity=0.041 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC
Q 016755 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS 174 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs 174 (383)
++...|...+..+-++++++-.....--..+...+++.- +.+.... .-+......-+++.|+ -++|||.
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~i--~~~~~~~-----~~e~~~~~~~l~~~G~----~~viG~~ 153 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLDI--VQRSYVT-----EEDARSCVNDLRARGI----GAVVGAG 153 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce--EEEEecC-----HHHHHHHHHHHHHCCC----CEEECCh
Confidence 455556666666678888877544332223334455431 1111110 0011222222344454 4778999
Q ss_pred hhhhHHHHhcCCEEEEecCC
Q 016755 175 VIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 175 ~~Di~~a~~aG~~~i~v~~~ 194 (383)
.. ...|+++|+..+.+..+
T Consensus 154 ~~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 154 LI-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred HH-HHHHHHcCCceEEEecH
Confidence 65 68899999999999774
No 301
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=26.80 E-value=52 Score=24.13 Aligned_cols=18 Identities=28% Similarity=0.661 Sum_probs=15.1
Q ss_pred cEEEEecCCcccccHHHH
Q 016755 10 SCVILDLDGTLLNTDGMF 27 (383)
Q Consensus 10 k~viFDlDGTL~d~~~~~ 27 (383)
-.|+++-|||.+|++..+
T Consensus 40 ~~lvLeeDGT~Vd~EeyF 57 (81)
T cd06537 40 LTLVLEEDGTAVDSEDFF 57 (81)
T ss_pred eEEEEecCCCEEccHHHH
Confidence 468899999999997655
No 302
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=26.66 E-value=1.8e+02 Score=23.89 Aligned_cols=25 Identities=16% Similarity=0.161 Sum_probs=21.8
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCCh
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHR 118 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~ 118 (383)
+.+.++++.+++.|+++.+.||...
T Consensus 75 ~~l~~ll~~lk~~Gl~i~l~Tg~~~ 99 (147)
T TIGR02826 75 EALLSLLKIFKEKGLKTCLYTGLEP 99 (147)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCC
Confidence 5688999999999999999998654
No 303
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=26.31 E-value=55 Score=23.87 Aligned_cols=19 Identities=32% Similarity=0.749 Sum_probs=15.4
Q ss_pred ccEEEEecCCcccccHHHH
Q 016755 9 MSCVILDLDGTLLNTDGMF 27 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~ 27 (383)
.-.++++-|||.+|++..+
T Consensus 40 ~~~lvL~eDGT~Vd~EeyF 58 (78)
T cd06539 40 LVTLVLEEDGTVVDTEEFF 58 (78)
T ss_pred CcEEEEeCCCCEEccHHHH
Confidence 3468899999999997655
No 304
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=26.26 E-value=31 Score=31.82 Aligned_cols=107 Identities=18% Similarity=0.208 Sum_probs=64.1
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe-cC-CCC---ccccccccchhhccccccCcccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV-PS-LPK---QTHRYTAADEVINSLLDLRPEKW 219 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v-~~-~~~---~~~~~~~a~~vi~~l~e~~~~~~ 219 (383)
.+|.|+|+.|+++++-+ ++|.+.|++++.+ ++ +-. ..+...++..+.++|.+.-
T Consensus 127 NFGm~~PeGyRKAlRlm-----------------~~AekF~lPiitfIDT~GAypG~~AEErGQ~eAIA~nL~em~---- 185 (317)
T COG0825 127 NFGMPRPEGYRKALRLM-----------------KLAEKFGLPIITFIDTPGAYPGIGAEERGQSEAIARNLREMA---- 185 (317)
T ss_pred cCCCCCchHHHHHHHHH-----------------HHHHHhCCCEEEEecCCCCCCCcchhhcccHHHHHHHHHHHh----
Confidence 37899999999998864 6699999997764 43 211 1222335567888887732
Q ss_pred CCCCCcccccCCCCCCceeeeeeeeecccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCC
Q 016755 220 GLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWN 299 (383)
Q Consensus 220 ~l~~~~~~la~~llg~p~~~~G~v~~G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~ 299 (383)
.-..-+-.+|+---+-|. .|++-.+|-. ..+- +.+|.+- +. .|.++|=|+
T Consensus 186 --------------~LkvPiI~iVIGEGgSGG-ALAi~vad~V-----~mle---~s~ySVi---sP----EG~AsILWk 235 (317)
T COG0825 186 --------------RLKVPIISIVIGEGGSGG-ALAIGVADRV-----LMLE---NSTYSVI---SP----EGCASILWK 235 (317)
T ss_pred --------------CCCCCEEEEEecCCCchh-hHHhhHHHHH-----HHHH---hceeeec---Ch----hhhhhhhhc
Confidence 112223334442223344 4888888743 3333 6887663 22 566777776
Q ss_pred Ccc
Q 016755 300 PYF 302 (383)
Q Consensus 300 pt~ 302 (383)
-+-
T Consensus 236 D~~ 238 (317)
T COG0825 236 DAS 238 (317)
T ss_pred Chh
Confidence 554
No 305
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=26.08 E-value=60 Score=23.41 Aligned_cols=19 Identities=26% Similarity=0.600 Sum_probs=15.2
Q ss_pred ccEEEEecCCcccccHHHH
Q 016755 9 MSCVILDLDGTLLNTDGMF 27 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~ 27 (383)
.-.|+++-|||.+|++..+
T Consensus 38 ~~~l~L~eDGT~VddEeyF 56 (74)
T smart00266 38 PVTLVLEEDGTIVDDEEYF 56 (74)
T ss_pred CcEEEEecCCcEEccHHHH
Confidence 3468899999999987655
No 306
>PF09338 Gly_reductase: Glycine/sarcosine/betaine reductase component B subunits; InterPro: IPR015417 This is a family of glycine reductase, sarcosine reductase and betaine reductases. These enzymes catalyse the following reactions: sarcosine reductase: Acetyl phosphate + methylamine + thioredoxin disulphide = N-methylglycine + phosphate + thioredoxin. glycine reductase: Acetyl phosphate + NH3 + thioredoxin disulphide = glycine + phosphate + thioredoxin. betaine reductase: Acetyl phosphate + trimethylamine + thioredoxin disulphide = N,N,N-trimethylglycine + phosphate + thioredoxin. ; GO: 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process
Probab=26.04 E-value=3.8e+02 Score=26.44 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=29.5
Q ss_pred hhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 127 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 127 ~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+.+++ |.++.+.+ ++|.|+.+....+ +.+.+.|++++.+...
T Consensus 300 ~~Lga----DGaIvs~e-G~GN~d~D~~~~~---------------------~~~e~~GIktV~it~e 341 (428)
T PF09338_consen 300 EMLGA----DGAIVSEE-GFGNPDVDFAMNI---------------------EEIEKRGIKTVGITDE 341 (428)
T ss_pred HHhCC----CEEEEEec-CCCchhHHHHHHH---------------------HHHHHCCCCEEEecce
Confidence 45666 77776664 6777777666543 4478889999999863
No 307
>PF07535 zf-DBF: DBF zinc finger; InterPro: IPR006572 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. In eukaryotes, initiation of DNA replication requires the assembly of pre-replication complexes (pre-RCs) on chromatin during the G1 phase. In the S phase, pre-RCs are activated by two protein kinases, Cdk2 and Cdc7, which results in the loading of replication factors and the unwinding of replication origins by the MCM helicase complex []. Cdc7 is a serine/threonine kinase that is conserved from yeast to human. It is regulated by its association with a regulatory subunit, the Dbf4 protein. This complex is often referred to as DDK (Dbf4-dependent kinase) []. DBF4 contains an N-terminal BRCT domain and a C-terminal conserved region that could potentially coordinate one zinc atom, the DBF4-type zinc finger. This entry represents the zinc finger, which is important for the interaction with Cdc7 [, ]. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding
Probab=25.87 E-value=16 Score=24.01 Aligned_cols=20 Identities=25% Similarity=0.662 Sum_probs=16.9
Q ss_pred eeccCCCCCCCHHHHHHHHH
Q 016755 332 GYIRPEANFPSLETLIAKIH 351 (383)
Q Consensus 332 ~~~r~e~~f~~~~~l~~~i~ 351 (383)
+|-+...+|.+||+|+.+++
T Consensus 29 ~FA~~~~Nf~~lD~li~~l~ 48 (49)
T PF07535_consen 29 KFAENDSNFKELDSLISQLQ 48 (49)
T ss_pred HHHcCcccHHHHHHHHHHhc
Confidence 46678889999999999886
No 308
>PLN02887 hydrolase family protein
Probab=25.65 E-value=1.6e+02 Score=30.46 Aligned_cols=41 Identities=12% Similarity=0.168 Sum_probs=34.5
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
.+.+...+.+++++++|+.++++|+.+...+...+ +.+++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l-~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDIL-KMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHhCcc
Confidence 45677889999999999999999999998888777 666653
No 309
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=24.50 E-value=5.4e+02 Score=23.37 Aligned_cols=97 Identities=20% Similarity=0.248 Sum_probs=52.2
Q ss_pred CCchHHHHHHHHHHCCCCEE-EEeCCC-hHHHHHHHHhhcCCcccCcEEEeCCCCCCCC--CChHHHHHHHHHcCCCCCc
Q 016755 92 ALPGANRLIKHLSCHGVPMA-LASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGK--PSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~-i~s~~~-~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~k--p~p~~~~~~~~~lg~~p~e 167 (383)
+.+...++++.+++.|+... +++.+. .+.+...+ +.. +-|-.+++...++-.+ -.++. ...++++.-....
T Consensus 125 p~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~-~~~---~gfiy~vs~~G~TG~~~~~~~~~-~~~i~~lr~~~~~ 199 (256)
T TIGR00262 125 PLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIA-EKS---QGFVYLVSRAGVTGARNRAASAL-NELVKRLKAYSAK 199 (256)
T ss_pred ChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHH-HhC---CCCEEEEECCCCCCCcccCChhH-HHHHHHHHhhcCC
Confidence 44577889999999998866 444433 34444444 222 2124454443332111 12222 2222222211122
Q ss_pred EEEEecCh---hhhHHHHhcCCEEEEecC
Q 016755 168 SLVIEDSV---IGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 168 ~l~VGDs~---~Di~~a~~aG~~~i~v~~ 193 (383)
-+++|=+. .++..+.++|...+++.+
T Consensus 200 pi~vgfGI~~~e~~~~~~~~GADgvVvGS 228 (256)
T TIGR00262 200 PVLVGFGISKPEQVKQAIDAGADGVIVGS 228 (256)
T ss_pred CEEEeCCCCCHHHHHHHHHcCCCEEEECH
Confidence 36677655 488888889998888765
No 310
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=24.39 E-value=1.3e+02 Score=31.62 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=32.8
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
..+...+.|+.|+++|++++++|+.+...+...+ +.+++.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~-~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYR-NELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HHcCCC
Confidence 3456688899999999999999999988887777 667664
No 311
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.34 E-value=41 Score=33.43 Aligned_cols=15 Identities=40% Similarity=0.578 Sum_probs=13.2
Q ss_pred CccEEEEecCCcccc
Q 016755 8 LMSCVILDLDGTLLN 22 (383)
Q Consensus 8 ~ik~viFDlDGTL~d 22 (383)
..|++++|+|+||+-
T Consensus 221 ~kK~LVLDLDNTLWG 235 (574)
T COG3882 221 SKKALVLDLDNTLWG 235 (574)
T ss_pred ccceEEEecCCcccc
Confidence 468999999999984
No 312
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=24.22 E-value=43 Score=30.62 Aligned_cols=93 Identities=11% Similarity=0.121 Sum_probs=48.3
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCC-cccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl-~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
.-.|++.++|....+. +.+.+.|.+.+.+...++ ..+.- ...+.+-+-.+.+.... ..+-.-+..+|-+..+++
T Consensus 131 ~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~-D~LD~~~~i~~~RlyR~~C~~~~---g~yvKdls~~~~dL~~vi 205 (262)
T KOG1605|consen 131 RKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLL-DILDPDRKIISHRLYRDSCTLKD---GNYVKDLSVLGRDLSKVI 205 (262)
T ss_pred EcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHH-HHccCCCCeeeeeecccceEeEC---CcEEEEcceeccCcccEE
Confidence 3456666666666655 566666666666655555 33322 11111111111111000 001111245666888999
Q ss_pred EEecChhhhHHHHhcCCEE
Q 016755 170 VIEDSVIGVVAGKAAGMEV 188 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~ 188 (383)
.|.|++.-..+=-.-|+++
T Consensus 206 IiDNsP~sy~~~p~NgIpI 224 (262)
T KOG1605|consen 206 IVDNSPQSYRLQPENGIPI 224 (262)
T ss_pred EEcCChHHhccCccCCCcc
Confidence 9999997777666666643
No 313
>PF14819 QueF_N: Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term; PDB: 3UXV_C 3RJB_A 3BP1_D 3RZP_B 3RJ4_A 3UXJ_C 3S19_D 3RZQ_B.
Probab=24.22 E-value=76 Score=24.76 Aligned_cols=21 Identities=33% Similarity=0.404 Sum_probs=16.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 016755 338 ANFPSLETLIAKIHEDRKVAE 358 (383)
Q Consensus 338 ~~f~~~~~l~~~i~~d~~~~~ 358 (383)
.+|+|.+++.+.|.+|...|-
T Consensus 82 trf~s~~~v~~~i~~DLS~~~ 102 (110)
T PF14819_consen 82 TRFESWEAVQATIERDLSAAA 102 (110)
T ss_dssp -B-S-HHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHc
Confidence 589999999999999998763
No 314
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=23.97 E-value=3.8e+02 Score=21.52 Aligned_cols=85 Identities=8% Similarity=0.016 Sum_probs=39.7
Q ss_pred HHHHHHHCCCCEEEEeC--CChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-
Q 016755 99 LIKHLSCHGVPMALASN--SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV- 175 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~--~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~- 175 (383)
+-..|+..|+.+.-... +++++++..... +. +.+..+.-.....+....+...+++.|.+ .-.+++|-..
T Consensus 22 v~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~--~a----dii~iSsl~~~~~~~~~~~~~~L~~~g~~-~i~vivGG~~~ 94 (132)
T TIGR00640 22 IATAYADLGFDVDVGPLFQTPEEIARQAVEA--DV----HVVGVSSLAGGHLTLVPALRKELDKLGRP-DILVVVGGVIP 94 (132)
T ss_pred HHHHHHhCCcEEEECCCCCCHHHHHHHHHHc--CC----CEEEEcCchhhhHHHHHHHHHHHHhcCCC-CCEEEEeCCCC
Confidence 34446666766543322 244555544422 11 44443332222222222333334444432 3456666433
Q ss_pred -hhhHHHHhcCCEEEE
Q 016755 176 -IGVVAGKAAGMEVVA 190 (383)
Q Consensus 176 -~Di~~a~~aG~~~i~ 190 (383)
.|.+..+++|+.-+.
T Consensus 95 ~~~~~~l~~~Gvd~~~ 110 (132)
T TIGR00640 95 PQDFDELKEMGVAEIF 110 (132)
T ss_pred hHhHHHHHHCCCCEEE
Confidence 367778888886543
No 315
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=23.58 E-value=71 Score=23.32 Aligned_cols=18 Identities=28% Similarity=0.575 Sum_probs=14.8
Q ss_pred cEEEEecCCcccccHHHH
Q 016755 10 SCVILDLDGTLLNTDGMF 27 (383)
Q Consensus 10 k~viFDlDGTL~d~~~~~ 27 (383)
-.|+++-|||.+|++..+
T Consensus 41 ~~lvL~eDGTeVddEeYF 58 (78)
T cd01615 41 VTLVLEEDGTEVDDEEYF 58 (78)
T ss_pred eEEEEeCCCcEEccHHHH
Confidence 358899999999987655
No 316
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=23.23 E-value=2.5e+02 Score=25.33 Aligned_cols=80 Identities=15% Similarity=0.272 Sum_probs=48.7
Q ss_pred CCCEEEEeCCCh---HHHHHHHHhhc-CCcccCcEEE-eCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh--hhhH
Q 016755 107 GVPMALASNSHR---ATIESKISYQH-GWNESFSVIV-GSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV--IGVV 179 (383)
Q Consensus 107 G~~~~i~s~~~~---~~i~~~l~~~~-gl~~~f~~i~-~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~--~Di~ 179 (383)
++.+.+++.+.. +.++....+.+ .+.+ |.++ .+.+ ...|-|..-++++...|++ |++|||.+ .+..
T Consensus 30 dI~vrv~gsGaKm~pe~~e~~~~~~~~~~~p--df~I~isPN--~~~PGP~~ARE~l~~~~iP---~IvI~D~p~~k~kd 102 (276)
T PF01993_consen 30 DIDVRVVGSGAKMGPEDVEEVVTKMLKEWDP--DFVIVISPN--AAAPGPTKAREMLSAKGIP---CIVISDAPTKKAKD 102 (276)
T ss_dssp SEEEEEEEEET--SHHHHHHHHHHHHHHH----SEEEEE-S---TTSHHHHHHHHHHHHSSS----EEEEEEGGGGGGHH
T ss_pred CceEEEeccCCCCCHHHHHHHHHHHHHhhCC--CEEEEECCC--CCCCCcHHHHHHHHhCCCC---EEEEcCCCchhhHH
Confidence 566777766542 22333331221 2333 4433 3332 3577888888888887775 99999999 3677
Q ss_pred HHHhcCCEEEEecC
Q 016755 180 AGKAAGMEVVAVPS 193 (383)
Q Consensus 180 ~a~~aG~~~i~v~~ 193 (383)
..++.|+..+.+..
T Consensus 103 ~l~~~g~GYIivk~ 116 (276)
T PF01993_consen 103 ALEEEGFGYIIVKA 116 (276)
T ss_dssp HHHHTT-EEEEETT
T ss_pred HHHhcCCcEEEEec
Confidence 88999999988865
No 317
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=22.88 E-value=4e+02 Score=24.23 Aligned_cols=53 Identities=9% Similarity=0.120 Sum_probs=29.2
Q ss_pred HHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCC
Q 016755 96 ANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~ 150 (383)
+..++.++...|+++.=++...-..+..++ ..+.-.+ ...|+..+|..+...+
T Consensus 69 Vkall~~y~~~GLRlIev~k~~L~~l~~l~-~~l~~~~-~kFIlf~DDLsFe~~d 121 (249)
T PF05673_consen 69 VKALLNEYADQGLRLIEVSKEDLGDLPELL-DLLRDRP-YKFILFCDDLSFEEGD 121 (249)
T ss_pred HHHHHHHHhhcCceEEEECHHHhccHHHHH-HHHhcCC-CCEEEEecCCCCCCCc
Confidence 455666677777766666555444444444 3222112 2667777776665544
No 318
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=22.27 E-value=71 Score=23.43 Aligned_cols=18 Identities=28% Similarity=0.601 Sum_probs=14.8
Q ss_pred cEEEEecCCcccccHHHH
Q 016755 10 SCVILDLDGTLLNTDGMF 27 (383)
Q Consensus 10 k~viFDlDGTL~d~~~~~ 27 (383)
-.|+++-|||.+|++..+
T Consensus 43 ~~lvL~eDGT~VddEeyF 60 (80)
T cd06536 43 ITLVLAEDGTIVEDEDYF 60 (80)
T ss_pred eEEEEecCCcEEccHHHH
Confidence 457899999999997655
No 319
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=21.42 E-value=1.3e+02 Score=25.07 Aligned_cols=46 Identities=13% Similarity=0.180 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC
Q 016755 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~ 145 (383)
++.++-+.|++.|+++.+..+.+.+.+...+ +..++ ..|++..+..
T Consensus 54 sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~-~~~~~----~~V~~~~~~~ 99 (165)
T PF00875_consen 54 SLADLQESLRKLGIPLLVLRGDPEEVLPELA-KEYGA----TAVYFNEEYT 99 (165)
T ss_dssp HHHHHHHHHHHTTS-EEEEESSHHHHHHHHH-HHHTE----SEEEEE---S
T ss_pred HHHHHHHHHHhcCcceEEEecchHHHHHHHH-HhcCc----CeeEeccccC
Confidence 4567778889999999999999888877777 66665 6777776644
No 320
>PRK01060 endonuclease IV; Provisional
Probab=20.87 E-value=6.1e+02 Score=22.88 Aligned_cols=89 Identities=12% Similarity=0.166 Sum_probs=50.0
Q ss_pred CCchHHHHHHHHHHCCCCEE-EEeCCCh------------HHHHHHHHhhcCCcccCcEEE-eCCCCCCCCCChHHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMA-LASNSHR------------ATIESKISYQHGWNESFSVIV-GSDEVRTGKPSPDIFLEA 157 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~-i~s~~~~------------~~i~~~l~~~~gl~~~f~~i~-~~~~~~~~kp~p~~~~~~ 157 (383)
+..+..+.++.+++.|+.-. +...++. ..+...+ +..|+.-. ...+ .........|+++.....
T Consensus 10 ~~~~~~~~l~~~~~~G~d~vEl~~~~p~~~~~~~~~~~~~~~lk~~~-~~~gl~~~-~~~~h~~~~~nl~~~d~~~r~~s 87 (281)
T PRK01060 10 AAGGLEGAVAEAAEIGANAFMIFTGNPQQWKRKPLEELNIEAFKAAC-EKYGISPE-DILVHAPYLINLGNPNKEILEKS 87 (281)
T ss_pred cCCCHHHHHHHHHHcCCCEEEEECCCCCCCcCCCCCHHHHHHHHHHH-HHcCCCCC-ceEEecceEecCCCCCHHHHHHH
Confidence 45567888888988888754 2222221 1133344 45555310 0111 122234566777766665
Q ss_pred HHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 158 ~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
.+.+. .-++.|++.|++.+++..+.
T Consensus 88 ~~~~~-------------~~i~~A~~lga~~vv~h~G~ 112 (281)
T PRK01060 88 RDFLI-------------QEIERCAALGAKLLVFHPGS 112 (281)
T ss_pred HHHHH-------------HHHHHHHHcCCCEEEEcCCc
Confidence 55432 35677999999988887654
No 321
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=20.87 E-value=1.3e+02 Score=27.16 Aligned_cols=38 Identities=24% Similarity=0.400 Sum_probs=31.4
Q ss_pred HHHHHHHHHcCCCC--CcEEEEecCh-hhhHHHHhcCCEEE
Q 016755 152 DIFLEAAKRLNMEP--SSSLVIEDSV-IGVVAGKAAGMEVV 189 (383)
Q Consensus 152 ~~~~~~~~~lg~~p--~e~l~VGDs~-~Di~~a~~aG~~~i 189 (383)
+.|...++.+|++| .++-+|.|.. +-..+|...|+.+.
T Consensus 89 elYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWEVW 129 (279)
T cd00733 89 ELYLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWEVW 129 (279)
T ss_pred HHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEE
Confidence 56777889999988 5799999999 77888888888763
No 322
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=20.60 E-value=4.3e+02 Score=27.05 Aligned_cols=88 Identities=9% Similarity=0.035 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC
Q 016755 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS 174 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs 174 (383)
++...|...+..+-++++++-.....--..+.+.+++.-..-.+...+ +......-++..|+ -++|||.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i~~~~~~~~~-------e~~~~v~~lk~~G~----~~vvG~~ 163 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRIEQRSYVTEE-------DARGQINELKANGI----EAVVGAG 163 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCceEEEEecCHH-------HHHHHHHHHHHCCC----CEEEcCc
Confidence 455556666666678888877554332223334455432111111111 12222233344555 4778997
Q ss_pred hhhhHHHHhcCCEEEEecCC
Q 016755 175 VIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 175 ~~Di~~a~~aG~~~i~v~~~ 194 (383)
.. ...|+++|+..+.+...
T Consensus 164 ~~-~~~A~~~g~~g~~~~s~ 182 (538)
T PRK15424 164 LI-TDLAEEAGMTGIFIYSA 182 (538)
T ss_pred hH-HHHHHHhCCceEEecCH
Confidence 76 78899999999888653
No 323
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=20.37 E-value=6.5e+02 Score=22.83 Aligned_cols=98 Identities=10% Similarity=0.142 Sum_probs=61.6
Q ss_pred cCCCCchHHHHHHHHHHC---CCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEe-CCCCC--CCCCChHHHHHHHHHcC
Q 016755 89 KVKALPGANRLIKHLSCH---GVPMALASNSHRATIESKISYQHGWNESFSVIVG-SDEVR--TGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~---G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~-~~~~~--~~kp~p~~~~~~~~~lg 162 (383)
.-.++|+..++++..+.. |+.+.-+++.+.....+.. .+|. +.+-. +...+ .+-.+|+.++.+.+..+
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~--~~G~----~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~ 175 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLE--DAGC----AAVMPLGSPIGSGQGLLNPYNLRIIIERAD 175 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH--HcCC----CEeCCCCcCCCCCCCCCCHHHHHHHHHhCC
Confidence 345788888888776665 9988745555544444333 3454 23211 12222 34446888888777643
Q ss_pred CCCCcEEEEecC---hhhhHHHHhcCCEEEEecCCCC
Q 016755 163 MEPSSSLVIEDS---VIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 163 ~~p~e~l~VGDs---~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
+ .++++-+ +.|+..+-+.|...+++.+.-.
T Consensus 176 v----pVI~egGI~tpeda~~AmelGAdgVlV~SAIt 208 (248)
T cd04728 176 V----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIA 208 (248)
T ss_pred C----cEEEeCCCCCHHHHHHHHHcCCCEEEEChHhc
Confidence 2 3556544 4799999999999999988543
No 324
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=20.35 E-value=85 Score=23.67 Aligned_cols=25 Identities=16% Similarity=0.201 Sum_probs=18.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHcCC
Q 016755 339 NFPSLETLIAKIHEDRKVAERALDL 363 (383)
Q Consensus 339 ~f~~~~~l~~~i~~d~~~~~~~~~~ 363 (383)
.|++-+|=-+.++++|++||+-|++
T Consensus 62 tFnDcpeA~~eL~~eI~eAK~dLr~ 86 (91)
T PF08285_consen 62 TFNDCPEAAKELQKEIKEAKADLRK 86 (91)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4677777777888888888887753
No 325
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=20.27 E-value=2.2e+02 Score=25.17 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=26.4
Q ss_pred HHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEe
Q 016755 103 LSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG 140 (383)
Q Consensus 103 L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~ 140 (383)
++++|+.++++|+.+...+...+ ..+++.. .+.+++
T Consensus 26 ~~~~gi~~viaTGR~~~~v~~~~-~~l~l~~-~~~~I~ 61 (236)
T TIGR02471 26 GSGDAVGFGIATGRSVESAKSRY-AKLNLPS-PDVLIA 61 (236)
T ss_pred hcCCCceEEEEeCCCHHHHHHHH-HhCCCCC-CCEEEE
Confidence 46678999999999999998888 6666642 244444
Done!