Query 016756
Match_columns 383
No_of_seqs 255 out of 1263
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 03:16:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016756.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016756hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 100.0 4.4E-29 1.5E-33 241.1 19.0 229 117-372 11-276 (280)
2 1xhb_A Polypeptide N-acetylgal 90.7 4.9 0.00017 39.8 14.9 162 158-327 63-250 (472)
3 2d7i_A Polypeptide N-acetylgal 89.3 10 0.00034 39.0 16.4 161 158-326 146-329 (570)
4 4fix_A UDP-galactofuranosyl tr 83.3 15 0.00051 38.8 14.0 118 204-323 256-403 (657)
5 2ffu_A Ppgalnact-2, polypeptid 82.3 28 0.00094 34.7 15.0 121 207-327 137-282 (501)
6 3bcv_A Putative glycosyltransf 78.8 31 0.0011 29.8 13.2 165 156-330 34-220 (240)
7 2z86_A Chondroitin synthase; G 77.1 65 0.0022 32.8 16.1 116 208-323 166-316 (625)
8 1qg8_A Protein (spore coat pol 75.0 42 0.0014 29.3 15.2 117 206-329 78-208 (255)
9 2z86_A Chondroitin synthase; G 67.2 64 0.0022 32.8 13.3 158 156-329 404-566 (625)
10 4hg6_A Cellulose synthase subu 57.7 75 0.0026 34.0 12.1 120 201-324 224-355 (802)
11 2lnd_A De novo designed protei 49.1 10 0.00034 29.7 2.5 74 125-213 31-104 (112)
12 2bo4_A Mannosylglycerate synth 42.0 46 0.0016 32.8 6.8 168 156-328 28-210 (397)
13 2fy7_A Beta-1,4-galactosyltran 31.5 1.3E+02 0.0044 28.0 7.8 94 211-326 124-219 (287)
14 1vf5_H Protein PET N; photosyn 20.3 74 0.0025 19.9 2.4 23 22-44 4-26 (29)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.96 E-value=4.4e-29 Score=241.09 Aligned_cols=229 Identities=16% Similarity=0.209 Sum_probs=154.4
Q ss_pred CceEEEEEEEcCCCCH-HHHHHHHHHhccCCccchhhccCCeEEEEeecccCCCCchhhHHHHHHhhhCCCeeEcCCC--
Q 016756 117 KKLLAVIGVYTGFGSH-LNRNVYRGSWMPKGDALKKLEERGVVIRFVIGRSANRGDSLDRKIDAENRETKDFLILEGH-- 193 (383)
Q Consensus 117 ~k~~llI~V~Sa~~~~-~RR~aIR~TW~~~~~~l~~l~~~gv~vrFViG~s~~~~~~~~~~I~~E~~~~~DIl~l~d~-- 193 (383)
..-.|+|+|+|++++. .|+.+||+||++... .. .||.+..+ +..+... ..++++.. ++
T Consensus 11 ~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~--------~~--~fifsd~~------d~~l~~~--~~~~~~~~-~~~~ 71 (280)
T 2j0a_A 11 QLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIR--------QQ--TFIFTDSP------DERLQER--LGPHLVVT-QCSA 71 (280)
T ss_dssp CGGGEEEEEECCGGGTTTTHHHHHHTGGGGSG--------GG--EEEEESSC------CHHHHHH--HGGGEEEC-CC--
T ss_pred CcccEEEEEECcHHHHHHHHHHHHHHHhccCC--------Cc--eEEEcCCC------ccccccc--ccccceec-cccc
Confidence 3467889999999865 588999999998763 11 24343322 2233332 24456643 44
Q ss_pred cccCCChhHHHHHHHHHHhhcCCceEEEEEcCCceecHHHHHHHhhccCCCCceEEEEeecCCccccCCCcccccCcccc
Q 016756 194 EEAQEELPKKAKFFFSTAVQIWDAEFYVKVDDNIDLDLEGLIGLLDRSRGQESAYIGCMKSGDVVTEEGRQWYEPEWWKF 273 (383)
Q Consensus 194 ~DsY~nLt~Kt~~~f~wa~~~~~a~fvlKvDDDvfVn~~~L~~~L~~~~~~~~~YiG~~~~g~pir~~~~K~y~p~~~~f 273 (383)
.+++.+++.|+...+++... ++++|++|+|||+|||+++|+++|..+++..++|+|....+.|++. +++.|.+.
T Consensus 72 ~~~~~~l~~K~~~~~~~~l~-~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~---~~~~~~~~-- 145 (280)
T 2j0a_A 72 EHSHPALSCKMAAEFDAFLV-SGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHA---SELQSKQR-- 145 (280)
T ss_dssp -----CCCHHHHHHHHHHHH-HTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------
T ss_pred cccccchHHHHHHHHHHHhC-CCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccc---cccCcccc--
Confidence 34788999999999997754 6999999999999999999999999999999999999875555542 34444321
Q ss_pred CCCCCCCcccc-CCeEEECHHHHHHHHHhcccC-------CCCCCchHHHHHHhh-hCCCeEeeCCCcccCCCC-----C
Q 016756 274 GDGKSYFRHAA-GSIFVLSRNLAQYININSASL-------KTYAHDDTSVGSWMM-GVRATYKDDNRFCCSSIN-----R 339 (383)
Q Consensus 274 ~~~~~Yp~y~~-G~gYvlS~dla~~I~~~~~~l-------~~~~~EDV~vG~wl~-~l~v~~id~~~f~~~~~~-----~ 339 (383)
+....| +||+ |+||+||+++++.|+...... .....||+++|.|+. .+||...+...|....+. .
T Consensus 146 ~~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~~~~~~~~ 224 (280)
T 2j0a_A 146 TKLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLETLQLLGA 224 (280)
T ss_dssp -----C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSSCGGGCCT
T ss_pred cccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCchhccCCH
Confidence 122234 5765 569999999999998643221 233468999999998 999999998888543220 0
Q ss_pred CC-------------------CcccccCCCCCchhhhhhhhhhhhhh-ccccc
Q 016756 340 GC-------------------RPLSRLLMPLNNNIIFAASHALIYCI-LWCGF 372 (383)
Q Consensus 340 g~-------------------~C~~sf~~p~~~~~~F~~~h~~~~~~-~~c~~ 372 (383)
.. .-...|. .+++|.+|.++||++||. +||+.
T Consensus 225 ~~l~~~~~~s~~~~~~~~n~~~~~~~f~-~~~dp~r~~~~h~~~~~~~~~~~~ 276 (280)
T 2j0a_A 225 AQLPEQVTLSYGVFEGKLNVIKLPGPFS-HEEDPSRFRSLHCLLYPDTPWCPL 276 (280)
T ss_dssp TTGGGCSEEECEEETTEEECCCCCCSSC-TTTCTTSHHHHHHHHCTTCTTCCC
T ss_pred HHhccCcceecccccCccceeccCCccc-cccCCcceeeeeeeecCCCccccc
Confidence 00 1112363 489999999999999999 99996
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=90.66 E-value=4.9 Score=39.76 Aligned_cols=162 Identities=18% Similarity=0.206 Sum_probs=82.9
Q ss_pred EEEEeecccCCCCchhhHHHHHHhhhCC-CeeEcCCCcccCCChhHHHHHHHHHHhhcCCceEEEEEcCCceecHHHHHH
Q 016756 158 VIRFVIGRSANRGDSLDRKIDAENRETK-DFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVDDNIDLDLEGLIG 236 (383)
Q Consensus 158 ~vrFViG~s~~~~~~~~~~I~~E~~~~~-DIl~l~d~~DsY~nLt~Kt~~~f~wa~~~~~a~fvlKvDDDvfVn~~~L~~ 236 (383)
.|..|-..|.+ +...+.+++-.+++. .+.++. ..++. .+. .....+.+.-..+|++..|+|+.++++-|..
T Consensus 63 EIIvVDd~S~d--~~t~~~l~~~~~~~~~~v~vi~-~~~n~-G~~----~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ 134 (472)
T 1xhb_A 63 EIVLVDDASER--DFLKRPLESYVKKLKVPVHVIR-MEQRS-GLI----RARLKGAAVSRGQVITFLDAHCECTAGWLEP 134 (472)
T ss_dssp EEEEEECSCCC--GGGTHHHHHHHHSSSSCEEEEE-CSSCC-CHH----HHHHHHHHHCCSSEEEEEESSEEECTTCHHH
T ss_pred EEEEEECCCCc--HHHHHHHHHHHHHCCCcEEEEE-CCCCC-ChH----HHHHHHHHhccCCeEEEECCCeEeCccHHHH
Confidence 45555433321 224445555555666 454442 22221 222 2333444456689999999999999888877
Q ss_pred HhhccCCCCceEE-EEee--cCCccc-cCCC-------cccccCccc-c---------CC--CCCCCccccCCeEEECHH
Q 016756 237 LLDRSRGQESAYI-GCMK--SGDVVT-EEGR-------QWYEPEWWK-F---------GD--GKSYFRHAAGSIFVLSRN 293 (383)
Q Consensus 237 ~L~~~~~~~~~Yi-G~~~--~g~pir-~~~~-------K~y~p~~~~-f---------~~--~~~Yp~y~~G~gYvlS~d 293 (383)
+++.....+...+ |... ....+. .... .|.....|. + .+ .....+++.|++++++++
T Consensus 135 ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~ 214 (472)
T 1xhb_A 135 LLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRD 214 (472)
T ss_dssp HHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHH
T ss_pred HHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHH
Confidence 7776543333333 3221 111000 0000 011000000 0 00 122345788999999999
Q ss_pred HHHHHHHhcccCCCCCCchHHHHHH--hhhCCCeEe
Q 016756 294 LAQYININSASLKTYAHDDTSVGSW--MMGVRATYK 327 (383)
Q Consensus 294 la~~I~~~~~~l~~~~~EDV~vG~w--l~~l~v~~i 327 (383)
+.+.+-.-...+..+..||+-++.- ..|..+..+
T Consensus 215 ~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~ 250 (472)
T 1xhb_A 215 YFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIV 250 (472)
T ss_dssp HHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEE
T ss_pred HHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEc
Confidence 9998754333444556899888764 445444433
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=89.34 E-value=10 Score=39.00 Aligned_cols=161 Identities=16% Similarity=0.127 Sum_probs=82.8
Q ss_pred EEEEeecccCCCCchhhHHHHHHhhhCCCeeEcCCCcccCCChhHHHHHHHHHHhhcCCceEEEEEcCCceecHHHHHHH
Q 016756 158 VIRFVIGRSANRGDSLDRKIDAENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVDDNIDLDLEGLIGL 237 (383)
Q Consensus 158 ~vrFViG~s~~~~~~~~~~I~~E~~~~~DIl~l~d~~DsY~nLt~Kt~~~f~wa~~~~~a~fvlKvDDDvfVn~~~L~~~ 237 (383)
.|+.|-..|. ++.+.+.|++-.+++..|.++. ..++ .++..-. ..+.+.-..+|++..|+|+.++++-|..+
T Consensus 146 EIIVVDDgS~--D~tl~~~l~~~~~~~~~v~vi~-~~~n-~G~~~A~----N~G~~~A~gd~i~fLD~D~~~~p~~L~~l 217 (570)
T 2d7i_A 146 EIVLVDDFSD--REHLKKPLEDYMALFPSVRILR-TKKR-EGLIRTR----MLGASVATGDVITFLDSHCEANVNWLPPL 217 (570)
T ss_dssp EEEEEECSCC--CGGGTHHHHHHHTTSTTEEEEE-CSSC-CCHHHHH----HHHHHHCCSSEEEECCSSEEECTTCSHHH
T ss_pred EEEEEECCCC--cHHHHHHHHHHHHhCCeEEEEE-CCCC-CCHHHHH----HHHHHhcCCCEEEEEcCCccccccHHHHH
Confidence 4555544332 2232455665556666665552 2222 2333333 33333456799999999999998877777
Q ss_pred hhccCCCCceEEEEee---cCCcc--ccC--C-C----ccc-----ccCcc--ccC--CCCCCCccccCCeEEECHHHHH
Q 016756 238 LDRSRGQESAYIGCMK---SGDVV--TEE--G-R----QWY-----EPEWW--KFG--DGKSYFRHAAGSIFVLSRNLAQ 296 (383)
Q Consensus 238 L~~~~~~~~~YiG~~~---~g~pi--r~~--~-~----K~y-----~p~~~--~f~--~~~~Yp~y~~G~gYvlS~dla~ 296 (383)
+......+.+.+|... .+..+ +.. . . .|. .+... .+. ......+++.|+++++++++..
T Consensus 218 l~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~ 297 (570)
T 2d7i_A 218 LDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFW 297 (570)
T ss_dssp HHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHH
T ss_pred HHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHH
Confidence 6665434444444321 11110 000 0 0 010 00000 000 0011234678999999999999
Q ss_pred HHHHhcccCCCCCCchHHHHHHh--hhCCCeE
Q 016756 297 YININSASLKTYAHDDTSVGSWM--MGVRATY 326 (383)
Q Consensus 297 ~I~~~~~~l~~~~~EDV~vG~wl--~~l~v~~ 326 (383)
.+-.-...+..+..||+-+..=+ .|..+..
T Consensus 298 ~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~ 329 (570)
T 2d7i_A 298 ELGGYDPGLEIWGGEQYEISFKVWMCGGRMED 329 (570)
T ss_dssp HTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred hcCCCCCcccccCcchHHHHHHHHhCCCeEEE
Confidence 88543333444457999887644 4444433
No 4
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=83.27 E-value=15 Score=38.76 Aligned_cols=118 Identities=14% Similarity=0.080 Sum_probs=66.0
Q ss_pred HHHHHHHHhhcCCceEEEEEcCCceecHHHHHHHhhccC--CCCceEEEEeec-CCc-cccCCCcccc-------c--C-
Q 016756 204 AKFFFSTAVQIWDAEFYVKVDDNIDLDLEGLIGLLDRSR--GQESAYIGCMKS-GDV-VTEEGRQWYE-------P--E- 269 (383)
Q Consensus 204 t~~~f~wa~~~~~a~fvlKvDDDvfVn~~~L~~~L~~~~--~~~~~YiG~~~~-g~p-ir~~~~K~y~-------p--~- 269 (383)
--.+++.+....+++|++..|||+.+.++.|..++.... +...+..|.+.. ..+ .....+.+.. + .
T Consensus 256 ~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 335 (657)
T 4fix_A 256 YSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHA 335 (657)
T ss_dssp HHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTC
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccc
Confidence 345666666545789999999999999888877776542 233333334431 111 0000011110 0 0
Q ss_pred -c-ccc--------------CCCCCCCccccCCeEEECHHHHHHHHHhcccCCCCCCchHHHHHHhhhCC
Q 016756 270 -W-WKF--------------GDGKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVR 323 (383)
Q Consensus 270 -~-~~f--------------~~~~~Yp~y~~G~gYvlS~dla~~I~~~~~~l~~~~~EDV~vG~wl~~l~ 323 (383)
+ ..| ........|++|.+.++.+++.+.+---.. -....||+-++.=+...|
T Consensus 336 ~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~--~F~~~ED~Dl~lR~~~~G 403 (657)
T 4fix_A 336 EYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLP--LFIKWDDADYGLRAAEHG 403 (657)
T ss_dssp CSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCS--CSSSSHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChh--HhccCcHHHHHHHHHHcC
Confidence 0 000 001123458899999999999998742222 123469999987554444
No 5
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=82.25 E-value=28 Score=34.72 Aligned_cols=121 Identities=12% Similarity=0.122 Sum_probs=66.2
Q ss_pred HHHHHhhcCCceEEEEEcCCceecHHHHHHHhhccCCCCceEEEEee---cCCccc--cC------CCcccccCccc---
Q 016756 207 FFSTAVQIWDAEFYVKVDDNIDLDLEGLIGLLDRSRGQESAYIGCMK---SGDVVT--EE------GRQWYEPEWWK--- 272 (383)
Q Consensus 207 ~f~wa~~~~~a~fvlKvDDDvfVn~~~L~~~L~~~~~~~~~YiG~~~---~g~pir--~~------~~K~y~p~~~~--- 272 (383)
....+.+.-..+|++..|+|+.+.++-|..+++.....+...++... ....+. .. .-.|.....|.
T Consensus 137 A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (501)
T 2ffu_A 137 SRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMT 216 (501)
T ss_dssp HHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCC
Confidence 34445555678999999999999988887777765433333333321 000000 00 00010000000
Q ss_pred -------c-CC-CCCCCccccCCeEEECHHHHHHHHHhcccCCCCCCchHHHHHH--hhhCCCeEe
Q 016756 273 -------F-GD-GKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSW--MMGVRATYK 327 (383)
Q Consensus 273 -------f-~~-~~~Yp~y~~G~gYvlS~dla~~I~~~~~~l~~~~~EDV~vG~w--l~~l~v~~i 327 (383)
. .+ .....+++.|++.++++++...+-.-...+..+..||+-+..- ..|..+..+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~ 282 (501)
T 2ffu_A 217 PEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEII 282 (501)
T ss_dssp HHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEc
Confidence 0 00 1122356789999999999998854333344455899988754 445444433
No 6
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=78.83 E-value=31 Score=29.78 Aligned_cols=165 Identities=11% Similarity=0.124 Sum_probs=78.0
Q ss_pred CeEEEEeecccCCCCchhhHHHHHHhhhCCCeeEcCCCcccCCChhHHHHHHHHHHhhcCCceEEEEEcCCceecHHHHH
Q 016756 156 GVVIRFVIGRSANRGDSLDRKIDAENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVDDNIDLDLEGLI 235 (383)
Q Consensus 156 gv~vrFViG~s~~~~~~~~~~I~~E~~~~~DIl~l~d~~DsY~nLt~Kt~~~f~wa~~~~~a~fvlKvDDDvfVn~~~L~ 235 (383)
.+.|..|-..|.+ ...+.+++-.+++..|.++. .++ .... .....+.+....+|++.+|+|.++.++.|.
T Consensus 34 ~~eiIvvDd~S~d---~t~~~~~~~~~~~~~i~~i~--~~n-~G~~----~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~ 103 (240)
T 3bcv_A 34 DIEIILIDDESPD---NCPKICDDYAAQYPNIKVIH--KKN-AGLG----MACNSGLDVATGEYVAFCDSDDYVDSDMYM 103 (240)
T ss_dssp SEEEEEEECCCSS---SHHHHHHHHHHHCSSEEEEE--CCC-CCHH----HHHHHHHHHCCSSEEEECCTTCCCCTTHHH
T ss_pred CeEEEEEECCCCc---CHHHHHHHHHhhCCCEEEEE--CCC-CChH----HHHHHHHHHcCCCEEEEECCCCcCCHHHHH
Confidence 4566666544432 23334444445566666552 221 1222 234445555677999999999999988887
Q ss_pred HHhhccCC-CCceEEEEee----cCC---cccc--CCCcccccC----cc-c-cCCCCCCC----ccccCCeEEECHHHH
Q 016756 236 GLLDRSRG-QESAYIGCMK----SGD---VVTE--EGRQWYEPE----WW-K-FGDGKSYF----RHAAGSIFVLSRNLA 295 (383)
Q Consensus 236 ~~L~~~~~-~~~~YiG~~~----~g~---pir~--~~~K~y~p~----~~-~-f~~~~~Yp----~y~~G~gYvlS~dla 295 (383)
..+..... ...+.+|... .+. .+.. ....++... +. . +.....+. ...+|++.++.+++.
T Consensus 104 ~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~ 183 (240)
T 3bcv_A 104 TMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLI 183 (240)
T ss_dssp HHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHH
T ss_pred HHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHH
Confidence 77665432 3344443321 111 0100 000111100 00 0 00000000 014578899999999
Q ss_pred HHHHHhcccCCCCCCchHHHHHHhhh--CCCeEeeCC
Q 016756 296 QYININSASLKTYAHDDTSVGSWMMG--VRATYKDDN 330 (383)
Q Consensus 296 ~~I~~~~~~l~~~~~EDV~vG~wl~~--l~v~~id~~ 330 (383)
+.+-........+..||.-+..-+.. ..+..+++.
T Consensus 184 ~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~ 220 (240)
T 3bcv_A 184 EKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQT 220 (240)
T ss_dssp HHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC--
T ss_pred HHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCC
Confidence 88531111111234699999875544 344455544
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=77.07 E-value=65 Score=32.77 Aligned_cols=116 Identities=9% Similarity=0.105 Sum_probs=62.6
Q ss_pred HHHHhhcCCceEEEEEcCCceecHHHHHHHhhccCCCC-ceEEEEee-c-CCc--c----cc------------------
Q 016756 208 FSTAVQIWDAEFYVKVDDNIDLDLEGLIGLLDRSRGQE-SAYIGCMK-S-GDV--V----TE------------------ 260 (383)
Q Consensus 208 f~wa~~~~~a~fvlKvDDDvfVn~~~L~~~L~~~~~~~-~~YiG~~~-~-g~p--i----r~------------------ 260 (383)
...+.+..+.+|++..|+|+.+..+.|..++......+ ...+|... . ... . ..
T Consensus 166 ~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (625)
T 2z86_A 166 RNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAG 245 (625)
T ss_dssp HHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------
T ss_pred HHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhh
Confidence 34444456789999999999999888877776653222 23333321 0 000 0 00
Q ss_pred -----CCCcccccCcc---ccCCCCCCCccccCCeEEECHHHHHHHHHhcccCCCCCCchHHHHHHhhhCC
Q 016756 261 -----EGRQWYEPEWW---KFGDGKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVR 323 (383)
Q Consensus 261 -----~~~K~y~p~~~---~f~~~~~Yp~y~~G~gYvlS~dla~~I~~~~~~l~~~~~EDV~vG~wl~~l~ 323 (383)
....|....+. .+........++.|++.++++++...+-.-...+..+..||.-++.=+...|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G 316 (625)
T 2z86_A 246 KVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREG 316 (625)
T ss_dssp ------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTT
T ss_pred hhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCC
Confidence 00011000000 0000111223578999999999999884333333344579999987554444
No 8
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=74.98 E-value=42 Score=29.29 Aligned_cols=117 Identities=10% Similarity=0.044 Sum_probs=67.1
Q ss_pred HHHHHHhhcCCceEEEEEcCCceecHHHHHHHhhccC--CCCceEEEEeec---C---CccccCCCcccccCccccCCCC
Q 016756 206 FFFSTAVQIWDAEFYVKVDDNIDLDLEGLIGLLDRSR--GQESAYIGCMKS---G---DVVTEEGRQWYEPEWWKFGDGK 277 (383)
Q Consensus 206 ~~f~wa~~~~~a~fvlKvDDDvfVn~~~L~~~L~~~~--~~~~~YiG~~~~---g---~pir~~~~K~y~p~~~~f~~~~ 277 (383)
..+..+.+..+.+|++..|||.++.++.|...+.... +.-.+..|.... + .++. .+..|.. .+. .
T Consensus 78 ~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~-~~~--~ 150 (255)
T 1qg8_A 78 ALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVK----ETVRPAA-QVT--W 150 (255)
T ss_dssp HHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEE----EEEECCC-SCB--S
T ss_pred HHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchh----hccCchH-HHH--H
Confidence 3455566667889999999999999888877766543 333444444321 1 1111 1112211 111 1
Q ss_pred CCCccccCCeEEECHHHHHHHH-Hhc----ccCCCCCCchHHHHHHhhhCC-CeEeeC
Q 016756 278 SYFRHAAGSIFVLSRNLAQYIN-INS----ASLKTYAHDDTSVGSWMMGVR-ATYKDD 329 (383)
Q Consensus 278 ~Yp~y~~G~gYvlS~dla~~I~-~~~----~~l~~~~~EDV~vG~wl~~l~-v~~id~ 329 (383)
....+..|++.++.+++...+- .-. ........||.-+..-+...+ +..+++
T Consensus 151 ~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g~~~~~~~ 208 (255)
T 1qg8_A 151 NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFYPFYPLDE 208 (255)
T ss_dssp CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTCCBEEEEE
T ss_pred hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhCCEEEecC
Confidence 2344567899999999999875 220 011234679998876554333 434443
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=67.20 E-value=64 Score=32.80 Aligned_cols=158 Identities=9% Similarity=0.005 Sum_probs=77.3
Q ss_pred CeEEEEeecccCCCCchhhHHHHHHhhhCCCeeEcCCCcccCCChhHHHHHHHHHHhhcCCceEEEEEcCCceecHHHHH
Q 016756 156 GVVIRFVIGRSANRGDSLDRKIDAENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVDDNIDLDLEGLI 235 (383)
Q Consensus 156 gv~vrFViG~s~~~~~~~~~~I~~E~~~~~DIl~l~d~~DsY~nLt~Kt~~~f~wa~~~~~a~fvlKvDDDvfVn~~~L~ 235 (383)
.+.+..|-..|.+ ...+.+.+-.+.+..+.++. .++ .+.. ..+..+.+..+.+|++..|+|.++.++.|.
T Consensus 404 ~~eiivvdd~S~d---~t~~~~~~~~~~~~~i~~~~--~~n-~G~~----~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~ 473 (625)
T 2z86_A 404 DLEVCICDDGSTD---DTLRILQEHYANHPRVRFIS--QKN-KGIG----SASNTAVRLCRGFYIGQLDSDDFLEPDAVE 473 (625)
T ss_dssp SEEEEEEEESCSS---SHHHHHHHHHTTCTTEEEEE--ECC-CCHH----HHHHHHHHHCCSSEEEECCTTCEECTTHHH
T ss_pred CeEEEEEECcCCh---hHHHHHHHHHhhCCcEEEEe--CCC-CCHH----HHHHHHHHhcCCCEEEEECCCcccChhHHH
Confidence 4566555544432 22334444344555565441 221 1222 234445555678999999999999998887
Q ss_pred HHhhccC--CCCceEEEEeecCCccccCCCcccccC-ccc-cCCCCCCCccccCCeEEECHHHHHHHHHhcccCCCCCCc
Q 016756 236 GLLDRSR--GQESAYIGCMKSGDVVTEEGRQWYEPE-WWK-FGDGKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHD 311 (383)
Q Consensus 236 ~~L~~~~--~~~~~YiG~~~~g~pir~~~~K~y~p~-~~~-f~~~~~Yp~y~~G~gYvlS~dla~~I~~~~~~l~~~~~E 311 (383)
..+.... +.-.+..|... ..++.+++.... .|. +........++.|.+.++.+++...+-.-... ....|
T Consensus 474 ~~~~~~~~~~~~~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ggfd~~--~~~~e 547 (625)
T 2z86_A 474 LCLDEFRKDLSLACVYTTNR----NIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNES--ISNAV 547 (625)
T ss_dssp HHHHHHHHCTTCSEEEEEEE----EECTTSCEEEECCCCSSCCHHHHTTSCCCCSCEEEEHHHHTTTTCCCSS--CSSCH
T ss_pred HHHHHHHhCCCeeEEEeeeE----EECCCCCEeccCcccccCCHHHHhhcccCCceEEEEHHHHHHhCCCCCc--cCChH
Confidence 7776542 22222223211 011111111100 000 00001122345678889999876654321111 22569
Q ss_pred hHHHHHHhhhCC-CeEeeC
Q 016756 312 DTSVGSWMMGVR-ATYKDD 329 (383)
Q Consensus 312 DV~vG~wl~~l~-v~~id~ 329 (383)
|.-+..-+...+ +.+++.
T Consensus 548 D~dl~~r~~~~g~~~~~~~ 566 (625)
T 2z86_A 548 DYDMYLKLSEVGPFKHINK 566 (625)
T ss_dssp HHHHHHHHTTTSCEEEEEE
T ss_pred HHHHHHHHHHhCCEEEeCC
Confidence 998866555444 334443
No 10
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=57.74 E-value=75 Score=34.03 Aligned_cols=120 Identities=15% Similarity=-0.076 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHhhcCCceEEEEEcCCceecHHHHHHHhhccC--CCCceEEEEee--cCCccccCCCccc--ccCccccC
Q 016756 201 PKKAKFFFSTAVQIWDAEFYVKVDDNIDLDLEGLIGLLDRSR--GQESAYIGCMK--SGDVVTEEGRQWY--EPEWWKFG 274 (383)
Q Consensus 201 t~Kt~~~f~wa~~~~~a~fvlKvDDDvfVn~~~L~~~L~~~~--~~~~~YiG~~~--~g~pir~~~~K~y--~p~~~~f~ 274 (383)
..|.. .+..+.+..+.+|++.+|+|+.+.++.|.+.+.... ++-.+..|... ...+.......+. ..+...++
T Consensus 224 ~GKa~-alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (802)
T 4hg6_A 224 HAKAG-NMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFY 302 (802)
T ss_dssp SHHHH-HHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHH
T ss_pred CcchH-HHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHH
Confidence 34544 355566667889999999999999988888777652 22222222211 1111100000000 00000000
Q ss_pred C------CCCCCccccCCeEEECHHHHHHHHHhcccCCCCCCchHHHHHHhhhCCC
Q 016756 275 D------GKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVRA 324 (383)
Q Consensus 275 ~------~~~Yp~y~~G~gYvlS~dla~~I~~~~~~l~~~~~EDV~vG~wl~~l~v 324 (383)
. ...-.+++.|++.++.+++.+.+-.-. ...-.||..++.-+...|.
T Consensus 303 ~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~---~~~~~ED~~l~~rl~~~G~ 355 (802)
T 4hg6_A 303 GKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFA---GETITEDAETALEIHSRGW 355 (802)
T ss_dssp HTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCC---CSSSSHHHHHHHHHHTTTC
T ss_pred HHHHhhHhhcCCceecccchhhhHHHHHHcCCcC---CCCcchHHHHHHHHHHcCC
Confidence 0 000113467999999999999873211 2223599999987765553
No 11
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=49.08 E-value=10 Score=29.74 Aligned_cols=74 Identities=23% Similarity=0.241 Sum_probs=46.5
Q ss_pred EEcCCCCHHHHHHHHHHhccCCccchhhccCCeEEEEeecccCCCCchhhHHHHHHhhhCCCeeEcCCCcccCCChhHHH
Q 016756 125 VYTGFGSHLNRNVYRGSWMPKGDALKKLEERGVVIRFVIGRSANRGDSLDRKIDAENRETKDFLILEGHEEAQEELPKKA 204 (383)
Q Consensus 125 V~Sa~~~~~RR~aIR~TW~~~~~~l~~l~~~gv~vrFViG~s~~~~~~~~~~I~~E~~~~~DIl~l~d~~DsY~nLt~Kt 204 (383)
|.|+.++.+-|+.|...=-+- .-.++||-|.+.+.-.+.+.+-..|--.| |++--. ..++|+..+
T Consensus 31 irtatssqdirdiiksmkdng----------kplvvfvngasqndvnefqneakkegvsy-dvlkst----dpeeltqrv 95 (112)
T 2lnd_A 31 IRTATSSQDIRDIIKSMKDNG----------KPLVVFVNGASQNDVNEFQNEAKKEGVSY-DVLKST----DPEELTQRV 95 (112)
T ss_dssp EEEECSHHHHHHHHHHHTTCC----------SCEEEEECSCCHHHHHHHHHHHHHHTCEE-EEEECC----CHHHHHHHH
T ss_pred eeeccchhhHHHHHHHHHhcC----------CeEEEEecCcccccHHHHHHHHHhcCcch-hhhccC----CHHHHHHHH
Confidence 677778888899887642221 23577999987553333334444444445 666332 234689999
Q ss_pred HHHHHHHhh
Q 016756 205 KFFFSTAVQ 213 (383)
Q Consensus 205 ~~~f~wa~~ 213 (383)
..+++.+-.
T Consensus 96 reflktags 104 (112)
T 2lnd_A 96 REFLKTAGS 104 (112)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHhccc
Confidence 999988754
No 12
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=42.04 E-value=46 Score=32.82 Aligned_cols=168 Identities=11% Similarity=-0.043 Sum_probs=86.2
Q ss_pred CeEEEEeecccCCCCchhhHHHHHHhh-hCCC-eeEcCCCc-cc--CCChhHHHHHHHHHHhhcCCceEEEEEcCCc-ee
Q 016756 156 GVVIRFVIGRSANRGDSLDRKIDAENR-ETKD-FLILEGHE-EA--QEELPKKAKFFFSTAVQIWDAEFYVKVDDNI-DL 229 (383)
Q Consensus 156 gv~vrFViG~s~~~~~~~~~~I~~E~~-~~~D-Il~l~d~~-Ds--Y~nLt~Kt~~~f~wa~~~~~a~fvlKvDDDv-fV 229 (383)
...|.+|=+-|.+.+.++-+++..+.. .++. ++.+. .. .+ -.....=...+|+||.+..+.++++-+|-|. ..
T Consensus 28 ~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~-~~r~~~~n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~ 106 (397)
T 2bo4_A 28 RVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRL-QERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSF 106 (397)
T ss_dssp TCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEE-CCCCSSSSSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSC
T ss_pred CeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEe-cccCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCC
Confidence 356778887775533233333333443 3444 33221 11 01 2345556778888887446789999999999 48
Q ss_pred cHHHHHHHhhccCCCCceEEEEeec---CCccccCCCcccccCccccCC--CCCCCccccCCeEEECHHHHHHHHHhc--
Q 016756 230 DLEGLIGLLDRSRGQESAYIGCMKS---GDVVTEEGRQWYEPEWWKFGD--GKSYFRHAAGSIFVLSRNLAQYININS-- 302 (383)
Q Consensus 230 n~~~L~~~L~~~~~~~~~YiG~~~~---g~pir~~~~K~y~p~~~~f~~--~~~Yp~y~~G~gYvlS~dla~~I~~~~-- 302 (383)
++.-+.++++...+.-++.+|.... +..+.....++.... +++ .....+...++.+++++++++.+....
T Consensus 107 ~P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~---~~~~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~ 183 (397)
T 2bo4_A 107 GPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFAL---LWPHTELSWIEQPLGGELLMRREVAAMLYEDERV 183 (397)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHH---HCTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHH
T ss_pred CHHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHH---HHHHhhccccccCCcccEEEeHHHHHHHhhhccc
Confidence 8887777776543334566675321 111111111110000 111 001222335777899999999885321
Q ss_pred ccCCCCCCchHHHHHHh--hhCCCeEee
Q 016756 303 ASLKTYAHDDTSVGSWM--MGVRATYKD 328 (383)
Q Consensus 303 ~~l~~~~~EDV~vG~wl--~~l~v~~id 328 (383)
...+.|. -|+.+-.-+ .|+.|..+.
T Consensus 184 ~~~~~fg-~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 184 RRRSDWG-IDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp HTCCSTT-HHHHHHHHHHHTTCCEEEEE
T ss_pred CcCCCcc-hHHHHHHHHHHcCCEEEEEE
Confidence 1233343 366655433 345554443
No 13
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=31.49 E-value=1.3e+02 Score=27.97 Aligned_cols=94 Identities=16% Similarity=0.123 Sum_probs=51.5
Q ss_pred HhhcCCceEEEEEcCCceecHHHHHHHhhccCCCCceEEEEeecCCccccCCCcccccCccccCCCCCCCccccCCeEEE
Q 016756 211 AVQIWDAEFYVKVDDNIDLDLEGLIGLLDRSRGQESAYIGCMKSGDVVTEEGRQWYEPEWWKFGDGKSYFRHAAGSIFVL 290 (383)
Q Consensus 211 a~~~~~a~fvlKvDDDvfVn~~~L~~~L~~~~~~~~~YiG~~~~g~pir~~~~K~y~p~~~~f~~~~~Yp~y~~G~gYvl 290 (383)
+.+..+.+|++..|+|+.+..+.+. ......++.+ . +....+ .+ ...| ....|+..++
T Consensus 124 al~~A~gd~i~flD~D~i~~~d~~~---~~~~~~p~~~----~-----------~~~~~~-~~--~~~~-~~~~G~~~~~ 181 (287)
T 2fy7_A 124 ALKDYDYTCFVFSDVDLIPMNDHNA---YRCFSQPRHI----S-----------VAMDKF-GF--SLPY-VQYFGGVSAL 181 (287)
T ss_dssp HHHHSCCCEEEEECTTEEESBTTSC---CSCCSSCEEC----C-----------CEEGGG-TT--SCSS-TTCCCSEEEE
T ss_pred HHHhCCCCEEEEECCCcccCCCcce---EecCCCCceE----E-----------Eeeccc-cc--CCCc-CceeeeEEEE
Confidence 4355678999999999999888521 0000111100 0 000000 00 0112 2456889999
Q ss_pred CHHHHHHHHHhcccCCCCCCchHHHHHHhh--hCCCeE
Q 016756 291 SRNLAQYININSASLKTYAHDDTSVGSWMM--GVRATY 326 (383)
Q Consensus 291 S~dla~~I~~~~~~l~~~~~EDV~vG~wl~--~l~v~~ 326 (383)
.+++...+---...+..+..||+-++.=+. |..+.+
T Consensus 182 rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~ 219 (287)
T 2fy7_A 182 SKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISR 219 (287)
T ss_dssp EHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBC
T ss_pred EHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEe
Confidence 999988774333333444579998876443 444443
No 14
>1vf5_H Protein PET N; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.27.1 PDB: 2d2c_H* 2e74_H* 2e75_H* 2e76_H* 2zt9_H*
Probab=20.33 E-value=74 Score=19.87 Aligned_cols=23 Identities=22% Similarity=0.163 Sum_probs=19.8
Q ss_pred CCchhHHHHHHHHHHHHHHHhcc
Q 016756 22 HTSKPSVVLAFFSCLAWLYVAGR 44 (383)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~ 44 (383)
++--|+.++.+|+|-+.+.|-||
T Consensus 4 vsl~WaalmvvftfSlslVVWGR 26 (29)
T 1vf5_H 4 DVLGWVALLVVFTWSIAMVVWGR 26 (29)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhheeeeEEEEec
Confidence 45568999999999999999887
Done!