Query 016758
Match_columns 383
No_of_seqs 353 out of 2468
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 03:18:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016758.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016758hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nlt_A Protein YDJ1, mitochond 100.0 2.6E-65 8.8E-70 481.5 23.1 241 79-321 6-248 (248)
2 3lz8_A Putative chaperone DNAJ 100.0 1.9E-58 6.4E-63 450.4 18.5 254 2-325 32-315 (329)
3 3agx_A DNAJ homolog subfamily 100.0 8.2E-48 2.8E-52 345.9 19.3 180 84-326 2-181 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 3.3E-46 1.1E-50 335.3 20.9 178 83-325 2-180 (180)
5 1c3g_A Heat shock protein 40; 100.0 9.6E-43 3.3E-47 310.0 15.9 169 85-321 1-170 (170)
6 1xao_A YDJ1, mitochondrial pro 100.0 2E-29 7E-34 211.7 11.9 118 230-350 1-120 (121)
7 3i38_A Putative chaperone DNAJ 99.9 1.5E-26 5.3E-31 190.6 8.7 95 226-326 2-96 (109)
8 2ctt_A DNAJ homolog subfamily 99.8 4.5E-22 1.5E-26 162.7 3.4 102 84-192 1-103 (104)
9 1exk_A DNAJ protein; extended 99.5 1.6E-14 5.6E-19 111.6 6.0 77 101-184 1-78 (79)
10 1bq0_A DNAJ, HSP40; chaperone, 99.5 5E-15 1.7E-19 120.5 1.7 66 2-67 7-98 (103)
11 1nlt_A Protein YDJ1, mitochond 99.3 2.9E-12 9.8E-17 120.0 9.2 130 96-238 41-246 (248)
12 1hdj_A Human HSP40, HDJ-1; mol 99.3 6.7E-13 2.3E-17 102.0 3.9 46 2-47 7-74 (77)
13 2o37_A Protein SIS1; HSP40, J- 99.3 1.5E-12 5.3E-17 103.5 3.8 47 2-48 12-78 (92)
14 2ctr_A DNAJ homolog subfamily 99.3 1.9E-12 6.6E-17 102.1 4.2 47 2-48 11-79 (88)
15 2ej7_A HCG3 gene; HCG3 protein 99.3 1.8E-12 6.2E-17 100.7 3.5 44 2-45 13-80 (82)
16 2och_A Hypothetical protein DN 99.2 2E-12 7E-17 98.2 3.1 42 2-43 12-73 (73)
17 2ctp_A DNAJ homolog subfamily 99.2 2.9E-12 1E-16 98.6 3.1 43 2-44 11-75 (78)
18 2dn9_A DNAJ homolog subfamily 99.2 2.7E-12 9.1E-17 99.1 2.5 43 2-44 11-76 (79)
19 2dmx_A DNAJ homolog subfamily 99.2 5.3E-12 1.8E-16 100.3 2.7 46 2-47 13-82 (92)
20 2lgw_A DNAJ homolog subfamily 99.2 3.6E-12 1.2E-16 102.8 1.5 46 2-47 6-75 (99)
21 2cug_A Mkiaa0962 protein; DNAJ 99.2 7.8E-12 2.7E-16 98.5 2.3 43 2-44 21-85 (88)
22 2ctw_A DNAJ homolog subfamily 99.1 1.5E-11 5E-16 100.9 3.1 45 2-46 21-88 (109)
23 2yua_A Williams-beuren syndrom 99.1 3.2E-11 1.1E-15 97.2 4.4 45 2-46 21-90 (99)
24 2ctq_A DNAJ homolog subfamily 99.1 1.1E-11 3.8E-16 102.1 1.6 45 2-46 24-91 (112)
25 3apq_A DNAJ homolog subfamily 99.1 2.7E-11 9.2E-16 109.7 4.1 63 2-67 6-91 (210)
26 1wjz_A 1700030A21RIK protein; 99.0 8.3E-11 2.9E-15 93.6 3.1 40 2-41 20-88 (94)
27 2qsa_A DNAJ homolog DNJ-2; J-d 98.9 1.4E-10 5E-15 94.9 0.7 41 2-42 19-86 (109)
28 3i38_A Putative chaperone DNAJ 98.9 1.5E-09 5.1E-14 88.9 5.4 52 188-240 40-91 (109)
29 1gh6_A Large T antigen; tumor 98.9 2.5E-10 8.4E-15 94.2 0.5 41 2-42 12-73 (114)
30 2pf4_E Small T antigen; PP2A, 98.9 1.8E-10 6.2E-15 101.6 -0.4 41 2-42 15-76 (174)
31 1faf_A Large T antigen; J doma 98.8 1.5E-09 5E-14 83.7 1.9 42 2-44 15-77 (79)
32 2l6l_A DNAJ homolog subfamily 98.8 2.1E-09 7.1E-14 93.4 3.0 41 2-42 14-83 (155)
33 1xao_A YDJ1, mitochondrial pro 98.7 1.1E-08 3.7E-13 85.3 5.8 54 187-240 35-93 (121)
34 3apo_A DNAJ homolog subfamily 98.7 1.8E-09 6.2E-14 116.0 0.6 47 2-48 25-94 (780)
35 2ys8_A RAB-related GTP-binding 98.6 1.6E-08 5.4E-13 79.8 2.1 35 2-36 31-87 (90)
36 1fpo_A HSC20, chaperone protei 98.5 1.9E-08 6.5E-13 88.8 2.2 40 2-41 5-74 (171)
37 3hho_A CO-chaperone protein HS 98.5 3.4E-08 1.2E-12 87.4 2.4 38 2-39 8-75 (174)
38 3bvo_A CO-chaperone protein HS 98.5 4.4E-08 1.5E-12 89.0 2.5 38 2-39 47-114 (207)
39 1c3g_A Heat shock protein 40; 98.4 2.6E-07 8.8E-12 81.4 6.4 72 237-311 2-81 (170)
40 2q2g_A HSP40 protein, heat sho 98.4 2.9E-07 1E-11 81.8 6.2 74 235-312 3-88 (180)
41 3lz8_A Putative chaperone DNAJ 98.4 2.7E-07 9.1E-12 89.6 5.6 77 232-311 137-226 (329)
42 2guz_A Mitochondrial import in 98.4 1.2E-07 4.2E-12 71.3 2.3 34 2-35 18-71 (71)
43 3agx_A DNAJ homolog subfamily 98.3 1.1E-06 3.8E-11 78.1 8.1 75 235-313 2-89 (181)
44 1iur_A KIAA0730 protein; DNAJ 98.3 8.5E-08 2.9E-12 75.3 0.1 36 2-37 20-79 (88)
45 3uo3_A J-type CO-chaperone JAC 98.2 3E-07 1E-11 81.7 0.9 38 2-39 15-79 (181)
46 1exk_A DNAJ protein; extended 98.0 3.1E-06 1E-10 64.7 3.7 58 97-168 15-78 (79)
47 2ctt_A DNAJ homolog subfamily 98.0 3.3E-06 1.1E-10 68.1 4.1 60 97-170 32-97 (104)
48 2qwo_B Putative tyrosine-prote 98.0 1.5E-06 5.1E-11 68.6 1.5 29 2-30 37-91 (92)
49 3lcz_A YCZA, inhibitor of trap 97.7 5.8E-06 2E-10 58.4 0.8 33 151-185 6-38 (53)
50 3pmq_A Decaheme cytochrome C M 97.6 7.2E-07 2.5E-11 93.5 -8.6 78 88-165 168-257 (669)
51 3lcz_A YCZA, inhibitor of trap 97.1 0.00022 7.5E-09 50.2 2.3 26 112-139 10-35 (53)
52 2bx9_A Anti-trap, AT, tryptoph 97.0 0.00028 9.5E-09 49.7 2.1 28 111-140 9-36 (53)
53 2bx9_A Anti-trap, AT, tryptoph 96.9 0.00066 2.3E-08 47.7 3.6 29 127-168 9-37 (53)
54 2guz_B Mitochondrial import in 95.3 0.0092 3.2E-07 43.6 2.7 28 2-29 8-57 (65)
55 1n4c_A Auxilin; four helix bun 65.8 2.2 7.5E-05 37.3 1.6 15 2-16 121-135 (182)
56 1ltl_A DNA replication initiat 55.9 51 0.0017 30.3 9.2 34 128-166 135-168 (279)
57 3ag7_A Putative uncharacterize 50.2 8.6 0.00029 30.3 2.4 14 2-16 45-58 (106)
58 1ltl_A DNA replication initiat 42.2 32 0.0011 31.7 5.4 18 208-225 206-223 (279)
59 2bx2_L Ribonuclease E, RNAse E 41.4 5.8 0.0002 40.2 0.2 29 140-168 394-422 (517)
60 2rq5_A Protein jumonji; develo 40.7 7.9 0.00027 31.4 0.8 38 2-39 71-111 (121)
61 2vl6_A SSO MCM N-TER, minichro 39.5 55 0.0019 29.8 6.5 65 154-225 168-236 (268)
62 2lll_A Lamin-B2; immunoglobuli 38.3 59 0.002 26.9 5.8 40 249-289 47-87 (139)
63 3pr6_A Trapp-associated protei 33.0 15 0.00053 31.3 1.4 24 9-32 102-129 (162)
64 3jt0_A Lamin-B1; structural ge 32.0 68 0.0023 26.6 5.2 40 249-289 51-90 (144)
65 1ifr_A Lamin A/C; immunoglobul 27.5 1.1E+02 0.0037 24.5 5.6 40 249-289 32-72 (121)
66 3pmq_A Decaheme cytochrome C M 27.1 8.3 0.00028 40.4 -1.5 29 128-163 192-220 (669)
67 2vf7_A UVRA2, excinuclease ABC 25.7 22 0.00076 38.2 1.4 33 129-165 640-672 (842)
68 1sif_A Ubiquitin; hydrophobic 24.2 63 0.0021 23.8 3.4 25 249-273 6-30 (88)
69 1mli_A Muconolactone isomerase 23.9 78 0.0027 24.4 3.9 21 301-321 4-24 (96)
70 3hn9_A Lamin-B1; structural ge 23.7 1.2E+02 0.0042 24.2 5.3 40 249-289 38-77 (123)
71 3vdz_A Ubiquitin-40S ribosomal 23.5 59 0.002 25.3 3.2 40 234-273 14-56 (111)
72 1cf7_A Protein (transcription 22.3 32 0.0011 25.4 1.3 20 21-40 33-52 (76)
73 1ufg_A Lamin A, nuclear lamin; 21.5 1.7E+02 0.0059 24.4 5.9 51 249-302 63-114 (151)
74 2r6f_A Excinuclease ABC subuni 21.3 39 0.0013 36.9 2.3 33 129-165 755-787 (972)
75 1gmu_A UREE; metallochaperone; 21.1 1.6E+02 0.0054 24.2 5.6 44 240-284 16-59 (143)
76 2kdx_A HYPA, hydrogenase/ureas 20.6 51 0.0018 26.1 2.4 28 111-138 73-101 (119)
No 1
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=2.6e-65 Score=481.45 Aligned_cols=241 Identities=45% Similarity=0.871 Sum_probs=220.5
Q ss_pred ccccCCcceeeeEEEehhhhcccceeeecceeeeeCCCCCCCCcccCceeeCCCCcccceEEEEEecCCcceeeeeccCC
Q 016758 79 RRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCN 158 (383)
Q Consensus 79 ~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~ 158 (383)
++++++.|+.+.|.|||||+|+|+++++.+++.+.|++|+|+|+..++..+|+.|+|+|+++..+++|| |+++++.+|+
T Consensus 6 ~~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~ 84 (248)
T 1nlt_A 6 RGPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECD 84 (248)
T ss_dssp --CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCT
T ss_pred CCCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCC
Confidence 345689999999999999999999999999999999999999999887789999999999999999999 9999999999
Q ss_pred CCcceeEEEcCCCCCCCCCCceEEEEcEEEEEEeccCcccCCEEEecCCcCCCCCCCcccEEEEEEEeeCCccccccccc
Q 016758 159 ECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDL 238 (383)
Q Consensus 159 ~C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~vk~h~~f~R~g~dL 238 (383)
.|+|+|+++.++++|+.|+|.+++.+.++|+|+|||||++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+||
T Consensus 85 ~C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL 164 (248)
T 1nlt_A 85 VCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDL 164 (248)
T ss_dssp TCSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEE
T ss_pred CCCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEE
Confidence 99999999988899999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred cccccCCHHHHhCCCEEEEEccCCCEEEEEcCCCCcccCCcEEEEcCCCCCCCCCCCCCCceEEEEEEeCCCC--CCHHH
Q 016758 239 FVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQ 316 (383)
Q Consensus 239 ~~~~~I~l~eAl~G~~~~i~tldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~f~V~~P~~--l~~~~ 316 (383)
|++++|||+|||+|+++.|+||||+.+.|++|||++++||++++|+|+|||..+++ .+|||||+|+|+||++ ||++|
T Consensus 165 ~~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q 243 (248)
T 1nlt_A 165 VYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEEN 243 (248)
T ss_dssp EEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC--------
T ss_pred EEEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHH
Confidence 99999999999999999999999998999999999999999999999999987555 6899999999999999 99999
Q ss_pred HHHHH
Q 016758 317 CKMLE 321 (383)
Q Consensus 317 ~~~l~ 321 (383)
+++|+
T Consensus 244 ~~~l~ 248 (248)
T 1nlt_A 244 LKKLE 248 (248)
T ss_dssp -----
T ss_pred HHhhC
Confidence 98874
No 2
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=1.9e-58 Score=450.43 Aligned_cols=254 Identities=25% Similarity=0.376 Sum_probs=158.4
Q ss_pred cccCCCCCCCHHHHH----------------------HHHHHHHHHHhcCCccccchhcccCchhhccCc----C---CC
Q 016758 2 RFSESRKNASQDDLK----------------------KFKELAQAYEVLSDPEKREIYDQYGEDALKEGM----G---GG 52 (383)
Q Consensus 2 ~iLGV~~~As~~EIK----------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~~~~g~----~---~~ 52 (383)
+||||+++||.+||| +|++|++||||||||++|+.||+|+..+...++ . ++
T Consensus 32 ~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~~~~~~~ 111 (329)
T 3lz8_A 32 AILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQRQTHEQS 111 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCcccccccccCC
Confidence 699999999999999 899999999999999999999999543221111 1 11
Q ss_pred CCCCCccchhhcccCCCCCCCCCCCCccccCCcceeeeEEEehhhhcccceeeecceeeeeCCCCCCCCcccCceeeCCC
Q 016758 53 GGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSG 132 (383)
Q Consensus 53 ~~~~~~~d~F~~~Fgg~~f~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~ 132 (383)
.++.++.|||++|||+++++ ++.+++.++.|+.++|.|||+|+|+|++++|.+++.+.|
T Consensus 112 f~~~~f~diF~~~Fg~~g~~---~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~------------------ 170 (329)
T 3lz8_A 112 YSQQDFDDIFSSMFGQQAHQ---RRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN------------------ 170 (329)
T ss_dssp ----------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC------------------
T ss_pred cCCCchhhhhHhhhcCcCCC---CCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec------------------
Confidence 11235779999999853211 112335789999999999999999999999999877632
Q ss_pred CcccceEEEEEecCCcceeeeeccCCCCcceeEEEcCCCCCCCCCCceEEEEcEEEEEEeccCcccCCEEEecCCcCCCC
Q 016758 133 CQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAP 212 (383)
Q Consensus 133 C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~ 212 (383)
|.|.+ .+...++++|+||||+++|++|+|+|+|++.+
T Consensus 171 --g~G~v-----------------------------------------~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~ 207 (329)
T 3lz8_A 171 --VFGMI-----------------------------------------ESETPKTLNVKIPAGVVDGQRIRLKGQGTPGE 207 (329)
T ss_dssp --SCC-C-----------------------------------------CEEEEEEEEEEECTTCCTTCEEEESSCSCCC-
T ss_pred --CCeEE-----------------------------------------EEecceEEEEeCCCCCCCCCEEEEcccccCCC
Confidence 11111 12335689999999999999999999999864
Q ss_pred -CCCcccEEEEEEEeeCCccccccccccccccCCHHHHhCCCEEEEEccCCCEEEEEcCCCCcccCCcEEEEcCCCCCCC
Q 016758 213 -DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMY 291 (383)
Q Consensus 213 -~~~~GDliv~i~vk~h~~f~R~g~dL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~ 291 (383)
++.+|||||+|++++|+.|+|+|+||+++++|+|+|||||+++.|+||||+ +.|+||+| ++||++++|+|+|||..
T Consensus 208 ~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~g--t~~g~~~rl~G~GmP~~ 284 (329)
T 3lz8_A 208 NGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKGKGLVSK 284 (329)
T ss_dssp --CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETTCSCBCS
T ss_pred CCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCC--CCCCCEEEEcCCCCCCC
Confidence 678999999999999999999999999999999999999999999999998 68999998 69999999999999975
Q ss_pred CCCCCCCceEEEEEEeCCCCCCHHHHHHHHhhCC
Q 016758 292 QRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 325 (383)
Q Consensus 292 ~~~~~~GdL~i~f~V~~P~~l~~~~~~~l~~~lp 325 (383)
..+|||||+|+|+||++||++|+++|+++..
T Consensus 285 ---~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~ 315 (329)
T 3lz8_A 285 ---THTGDLFAVIKIVMPTKPDEKARELWQQLAA 315 (329)
T ss_dssp ---SCBCCEEEEEEECCCSSCCHHHHHHHHHHHH
T ss_pred ---CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 3699999999999999999999999999875
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=8.2e-48 Score=345.92 Aligned_cols=180 Identities=39% Similarity=0.677 Sum_probs=160.1
Q ss_pred CcceeeeEEEehhhhcccceeeecceeeeeCCCCCCCCcccCceeeCCCCcccceEEEEEecCCcceeeeeccCCCCcce
Q 016758 84 GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 163 (383)
Q Consensus 84 g~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~ 163 (383)
+.|+.+.|.|||||+|+|+++++.+++.
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~---------------------------------------------------- 29 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHK---------------------------------------------------- 29 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEE----------------------------------------------------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecc----------------------------------------------------
Confidence 4688999999999999999999876431
Q ss_pred eEEEcCCCCCCCCCCceEEEEcEEEEEEeccCcccCCEEEecCCcCCCCCCCcccEEEEEEEeeCCcccccccccccccc
Q 016758 164 GETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHT 243 (383)
Q Consensus 164 G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~vk~h~~f~R~g~dL~~~~~ 243 (383)
|..|+|++++.+.++++|+|||||++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+|||++++
T Consensus 30 ---------c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~ 100 (181)
T 3agx_A 30 ---------RLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPAR 100 (181)
T ss_dssp ---------EECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred ---------cCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEE
Confidence 22333334456789999999999999999999999999888899999999999999999999999999999
Q ss_pred CCHHHHhCCCEEEEEccCCCEEEEEcCCCCcccCCcEEEEcCCCCCCCCCCCCCCceEEEEEEeCCCCCCHHHHHHHHhh
Q 016758 244 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETV 323 (383)
Q Consensus 244 I~l~eAl~G~~~~i~tldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~f~V~~P~~l~~~~~~~l~~~ 323 (383)
|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|+||++||++|+++|+++
T Consensus 101 Isl~eAllG~~i~v~tldG~~~~i~i~~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~ 178 (181)
T 3agx_A 101 ISLREALCGCTVNVPTLDGRTIPVVFKDV--IRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQV 178 (181)
T ss_dssp EEHHHHHHCEEEEEECTTSCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHH
T ss_pred cCHHHHhCCCEEEeECCCCCEEEEECCCc--cCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHh
Confidence 99999999999999999999899999887 7999999999999998765667899999999999999999999999999
Q ss_pred CCC
Q 016758 324 LPP 326 (383)
Q Consensus 324 lp~ 326 (383)
||+
T Consensus 179 ~~~ 181 (181)
T 3agx_A 179 LPI 181 (181)
T ss_dssp SCC
T ss_pred ccC
Confidence 973
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.3e-46 Score=335.25 Aligned_cols=178 Identities=37% Similarity=0.659 Sum_probs=164.4
Q ss_pred CCcceeeeEEEehhhhcccceeeecceeeeeCCCCCCCCcccCceeeCCCCcccceEEEEEecCCcceeeeeccCCCCcc
Q 016758 83 RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKG 162 (383)
Q Consensus 83 kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G 162 (383)
++.|+.+.|.|||||+|+|+++++.+++.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 3679999999999999999999999999888741
Q ss_pred eeEEEcCCCCCCCCCCceEEEEcEEEEEEeccCcccCCEEEecCCcCC-CCCCCcccEEEEEEEeeCCcccccccccccc
Q 016758 163 TGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGDDLFVE 241 (383)
Q Consensus 163 ~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDliv~i~vk~h~~f~R~g~dL~~~ 241 (383)
+++.+.++++|+|||||++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+|||++
T Consensus 36 -----------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~ 98 (180)
T 2q2g_A 36 -----------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMK 98 (180)
T ss_dssp -----------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEE
T ss_pred -----------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEE
Confidence 2345678999999999999999999999999 7889999999999999999999999999999
Q ss_pred ccCCHHHHhCCCEEEEEccCCCEEEEEcCCCCcccCCcEEEEcCCCCCCCCCCCCCCceEEEEEEeCCCCCCHHHHHHHH
Q 016758 242 HTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 321 (383)
Q Consensus 242 ~~I~l~eAl~G~~~~i~tldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~f~V~~P~~l~~~~~~~l~ 321 (383)
++|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|+||++||++|+++|+
T Consensus 99 ~~Isl~eAllG~~i~v~tldG~~v~i~ip~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 176 (180)
T 2q2g_A 99 VTIPLVRALTGFTCPVTTLDNRNLQIPIKEI--VNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIK 176 (180)
T ss_dssp EEEEHHHHHHCEEEEEECTTCCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHH
T ss_pred EEcCHHHHhCCCEEEeeCCCCCEEEEECCCc--cCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHH
Confidence 9999999999999999999999899999987 79999999999999987666679999999999999999999999999
Q ss_pred hhCC
Q 016758 322 TVLP 325 (383)
Q Consensus 322 ~~lp 325 (383)
++||
T Consensus 177 ~~~p 180 (180)
T 2q2g_A 177 EALD 180 (180)
T ss_dssp HHC-
T ss_pred HhcC
Confidence 9985
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=9.6e-43 Score=310.00 Aligned_cols=169 Identities=36% Similarity=0.585 Sum_probs=153.4
Q ss_pred cceeeeEEEehhhhcccceeeecceeeeeCCCCCCCCcccCceeeCCCCcccceEEEEEecCCcceeeeeccCCCCccee
Q 016758 85 EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTG 164 (383)
Q Consensus 85 ~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G 164 (383)
+|+.+.|.|||||+|+|+++++.+.+.. + +
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~------~----------------~---------------------------- 30 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG------P----------------H---------------------------- 30 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE------T----------------T----------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec------C----------------C----------------------------
Confidence 4789999999999999999999987651 0 0
Q ss_pred EEEcCCCCCCCCCCceEEEEcEEEEEEeccCcccCCEEEecCCcCC-CCCCCcccEEEEEEEeeCCcccccccccccccc
Q 016758 165 ETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHT 243 (383)
Q Consensus 165 ~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDliv~i~vk~h~~f~R~g~dL~~~~~ 243 (383)
|.+ +.++++|+|||||++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+|||++++
T Consensus 31 ---------------G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~ 94 (170)
T 1c3g_A 31 ---------------GAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLP 94 (170)
T ss_dssp ---------------TEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEEC
T ss_pred ---------------CcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEE
Confidence 112 568899999999999999999999995 678899999999999999999999999999999
Q ss_pred CCHHHHhCCCEEEEEccCCCEEEEEcCCCCcccCCcEEEEcCCCCCCCCCCCCCCceEEEEEEeCCCCCCHHHHHHHH
Q 016758 244 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 321 (383)
Q Consensus 244 I~l~eAl~G~~~~i~tldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~f~V~~P~~l~~~~~~~l~ 321 (383)
|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|+
T Consensus 95 Isl~eAllG~~~~v~tldG~~~~i~i~~~--t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 95 LSFKESLLGFSKTIQTIDGRTLPLSRVQP--VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp CBHHHHHHCEEEEEECSSSCEEEEEESSC--CCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred cCHHHHhCCCeEEeeCCCCCEEEEECCCc--cCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 99999999999999999999889999987 79999999999999987666678999999999999999999988763
No 6
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2e-29 Score=211.73 Aligned_cols=118 Identities=37% Similarity=0.601 Sum_probs=101.6
Q ss_pred ccccccccccccccCCHHHHhCCCEEEEEccCCCEEEEEcCCCCcccCCcEEEEcCCCCCCCCCCCCCCceEEEEEEeCC
Q 016758 230 KFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFP 309 (383)
Q Consensus 230 ~f~R~g~dL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~f~V~~P 309 (383)
.|+|+|+||+++++|||++||+|+++.|+||||+.+.|++|+|+|++||++++|+|+|||..+++ .+|||||+|+|.||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 49999999999999999999999999999999998999999999999999999999999987655 68999999999999
Q ss_pred CC--CCHHHHHHHHhhCCCCCCCCCccCcccccceeeeccCCh
Q 016758 310 ES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNI 350 (383)
Q Consensus 310 ~~--l~~~~~~~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (383)
+. |+++|+++|+++++..+. . .....+++|++.+.++++
T Consensus 80 ~~~~ls~~q~~~l~~l~~~~~~-~-~~~~~~~~ee~~~~~~~~ 120 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILPPRIV-P-AIPKKATVDECVLADFDP 120 (121)
T ss_dssp CTTCSCHHHHHHHHHHSCCCCC-C-CCCTTSCEEEEECEECCC
T ss_pred CCCCCCHHHHHHHHHHcccccc-c-CCCCCCCceEEEeeccCC
Confidence 99 999999999999987653 1 123346778888888875
No 7
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.93 E-value=1.5e-26 Score=190.57 Aligned_cols=95 Identities=20% Similarity=0.332 Sum_probs=88.1
Q ss_pred eeCCccccccccccccccCCHHHHhCCCEEEEEccCCCEEEEEcCCCCcccCCcEEEEcCCCCCCCCCCCCCCceEEEEE
Q 016758 226 KEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFT 305 (383)
Q Consensus 226 k~h~~f~R~g~dL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~f~ 305 (383)
++|+.|+|+|+||+++++|||.|||+|+++.|+||||+ +.|+||+| ++||++++|+|+|||.. + .+|||||+|+
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g--~~~G~~~rl~G~G~p~~-~--~~GDL~v~~~ 75 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKGKGLVSK-T--HTGDLFAVIK 75 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETTCSCBCS-S--CBCCEEEEEE
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCC--cCcCeEEEECCccCCCC-C--CCcCEEEEEE
Confidence 68999999999999999999999999999999999995 89999999 89999999999999973 2 6999999999
Q ss_pred EeCCCCCCHHHHHHHHhhCCC
Q 016758 306 VDFPESLSPDQCKMLETVLPP 326 (383)
Q Consensus 306 V~~P~~l~~~~~~~l~~~lp~ 326 (383)
|+||++||++|+++|++++..
T Consensus 76 V~~P~~Ls~~q~~~l~~l~~~ 96 (109)
T 3i38_A 76 IVMPTKPDEKARELWQQLAAA 96 (109)
T ss_dssp ECCCSSCCHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999853
No 8
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=4.5e-22 Score=162.65 Aligned_cols=102 Identities=27% Similarity=0.609 Sum_probs=90.4
Q ss_pred CcceeeeEEEehhhhcccceeeecceeeeeCCCCCCCCcccCce-eeCCCCcccceEEEEEecCCcceeeeeccCCCCcc
Q 016758 84 GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKG 162 (383)
Q Consensus 84 g~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G 162 (383)
+.|+.+.|.|||||+|+|++++|.+.+.+.|+.|+|+|+..+.. .+|+.|+|+|++...+ |+ + +++.+|+.|+|
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~--G~--~-~~~~~C~~C~G 75 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT--GP--F-VMRSTCRRCGG 75 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE--TT--E-EEEEECSSSSS
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe--CC--E-EEEEECCcCCC
Confidence 35788999999999999999999999999999999999988765 8999999999876543 54 3 46789999999
Q ss_pred eeEEEcCCCCCCCCCCceEEEEcEEEEEEe
Q 016758 163 TGETINDKDRCPQCKGEKVIQEKKVLEVIV 192 (383)
Q Consensus 163 ~G~~~~~~~~C~~C~G~g~~~~~~~l~V~I 192 (383)
+|++++ ++|+.|+|.+++.+.++|+|+|
T Consensus 76 ~G~~i~--~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 76 RGSIII--SPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SSEECS--SCCSSSSSCSEECCCCSSCCSC
T ss_pred cceECC--CcCCCCCCeeEEEEEEEEEEEc
Confidence 999985 8999999999999999988865
No 9
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.50 E-value=1.6e-14 Score=111.61 Aligned_cols=77 Identities=30% Similarity=0.758 Sum_probs=66.2
Q ss_pred cceeeecceeeeeCCCCCCCCcccCce-eeCCCCcccceEEEEEecCCcceeeeeccCCCCcceeEEEcCCCCCCCCCCc
Q 016758 101 GTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGE 179 (383)
Q Consensus 101 G~~~~i~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~ 179 (383)
|++++|.+.+.+.|+.|+|+|...... .+|+.|+|+|+++..+ |++ +++.+|+.|+|+|.++. ++|+.|+|.
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~ 73 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFF-AVQQTCPHCQGRGTLIK--DPCNKCHGH 73 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTE-EEEEECTTTTTSSEECS--SBCGGGTTS
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCC-EEeeECcCCCCccEECC--CcCCCCCCe
Confidence 677889999999999999999887654 7999999999977533 455 47789999999999875 899999999
Q ss_pred eEEEE
Q 016758 180 KVIQE 184 (383)
Q Consensus 180 g~~~~ 184 (383)
+++.+
T Consensus 74 G~~~~ 78 (79)
T 1exk_A 74 GRVER 78 (79)
T ss_dssp SEEEC
T ss_pred EEEee
Confidence 99865
No 10
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.48 E-value=5e-15 Score=120.46 Aligned_cols=66 Identities=47% Similarity=0.811 Sum_probs=44.5
Q ss_pred cccCCCCCCCHHHHH-----------------------HHHHHHHHHHhcCCccccchhcccCchhhccCcCCCC---CC
Q 016758 2 RFSESRKNASQDDLK-----------------------KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG---GA 55 (383)
Q Consensus 2 ~iLGV~~~As~~EIK-----------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~~~~g~~~~~---~~ 55 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|++++..+..+++ ++
T Consensus 7 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~~~~~~ 86 (103)
T 1bq0_A 7 EILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGG 86 (103)
T ss_dssp TTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC---------
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCCCCCCC
Confidence 699999999999999 8999999999999999999999999988875321111 12
Q ss_pred CCccchhhcccC
Q 016758 56 HDPFDIFQSFFG 67 (383)
Q Consensus 56 ~~~~d~F~~~Fg 67 (383)
.++.++|+.||+
T Consensus 87 ~~~~~~f~~~f~ 98 (103)
T 1bq0_A 87 ADFSDIFGDVFG 98 (103)
T ss_dssp ------------
T ss_pred CCHHHHHHHHHH
Confidence 255677888876
No 11
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.32 E-value=2.9e-12 Score=120.03 Aligned_cols=130 Identities=20% Similarity=0.328 Sum_probs=85.4
Q ss_pred hhhcccceeeecceeeeeCCCCCCCCccc----------CceeeCCCCcccceEEEEEecCCcceeeeeccCCCCcceeE
Q 016758 96 EDLYNGTSKKLSLSRNVICTKCKGKGSKS----------GASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE 165 (383)
Q Consensus 96 ee~~~G~~~~i~~~r~~~C~~C~G~G~~~----------~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~ 165 (383)
-..|.|...+-. . ...|+.|+|+|... ....+|+.|+|+|.++ ....+|+.|+|+|.
T Consensus 41 C~~C~G~G~~~g-~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i-----------~~~~~C~~C~G~g~ 107 (248)
T 1nlt_A 41 CKECEGRGGKKG-A-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDII-----------DPKDRCKSCNGKKV 107 (248)
T ss_dssp CTTTTTCSBSTT-T-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCC-----------CTTSBCSSSTTSCE
T ss_pred CCCCcCccCCCC-C-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEe-----------ccCCCCcccCCCce
Confidence 356777766532 2 38899999999642 1236899999999754 12678999999998
Q ss_pred EEcCCCC-----CCCC------------------CCceEEEEc-------------------------------------
Q 016758 166 TINDKDR-----CPQC------------------KGEKVIQEK------------------------------------- 185 (383)
Q Consensus 166 ~~~~~~~-----C~~C------------------~G~g~~~~~------------------------------------- 185 (383)
+...+.. -..- .|.=++...
T Consensus 108 ~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tld 187 (248)
T 1nlt_A 108 ENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVS 187 (248)
T ss_dssp EEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSS
T ss_pred EeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCC
Confidence 7643222 0000 011111110
Q ss_pred -EEEEEEeccC--cccCCEEEecCCcCCCCC-CCcccEEEEEEEeeCCc--cccccccc
Q 016758 186 -KVLEVIVEKG--MQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPK--FKRKGDDL 238 (383)
Q Consensus 186 -~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~-~~~GDliv~i~vk~h~~--f~R~g~dL 238 (383)
+.++|+|||| +++|++++|+|+|.+..+ ...|||||+|+|..+.. +..+...|
T Consensus 188 G~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 188 GDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp SCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred CCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence 4799999999 999999999999998543 26799999999998876 65554443
No 12
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.32 E-value=6.7e-13 Score=101.97 Aligned_cols=46 Identities=54% Similarity=0.921 Sum_probs=43.6
Q ss_pred cccCCCCCCCHHHHH----------------------HHHHHHHHHHhcCCccccchhcccCchhhcc
Q 016758 2 RFSESRKNASQDDLK----------------------KFKELAQAYEVLSDPEKREIYDQYGEDALKE 47 (383)
Q Consensus 2 ~iLGV~~~As~~EIK----------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~~~~ 47 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|.+++.+
T Consensus 7 ~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 7 QTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 689999999999999 8999999999999999999999999988764
No 13
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.28 E-value=1.5e-12 Score=103.48 Aligned_cols=47 Identities=49% Similarity=0.887 Sum_probs=44.4
Q ss_pred cccCCCCCCCHHHHH--------------------HHHHHHHHHHhcCCccccchhcccCchhhccC
Q 016758 2 RFSESRKNASQDDLK--------------------KFKELAQAYEVLSDPEKREIYDQYGEDALKEG 48 (383)
Q Consensus 2 ~iLGV~~~As~~EIK--------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~~~~g 48 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|++++..+
T Consensus 12 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 12 DLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 589999999999999 89999999999999999999999999988753
No 14
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=1.9e-12 Score=102.07 Aligned_cols=47 Identities=43% Similarity=0.705 Sum_probs=44.3
Q ss_pred cccCCCCCCCHHHHH----------------------HHHHHHHHHHhcCCccccchhcccCchhhccC
Q 016758 2 RFSESRKNASQDDLK----------------------KFKELAQAYEVLSDPEKREIYDQYGEDALKEG 48 (383)
Q Consensus 2 ~iLGV~~~As~~EIK----------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~~~~g 48 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|..++.++
T Consensus 11 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 11 DILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 689999999999999 89999999999999999999999999888754
No 15
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.26 E-value=1.8e-12 Score=100.72 Aligned_cols=44 Identities=45% Similarity=0.813 Sum_probs=41.5
Q ss_pred cccCCCCCCCHHHHH------------------------HHHHHHHHHHhcCCccccchhcccCchhh
Q 016758 2 RFSESRKNASQDDLK------------------------KFKELAQAYEVLSDPEKREIYDQYGEDAL 45 (383)
Q Consensus 2 ~iLGV~~~As~~EIK------------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~~ 45 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|+.++
T Consensus 13 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 13 EVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp HHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 689999999999999 79999999999999999999999997654
No 16
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.25 E-value=2e-12 Score=98.25 Aligned_cols=42 Identities=52% Similarity=0.828 Sum_probs=38.9
Q ss_pred cccCCCCCCCHHHHH--------------------HHHHHHHHHHhcCCccccchhcccCch
Q 016758 2 RFSESRKNASQDDLK--------------------KFKELAQAYEVLSDPEKREIYDQYGED 43 (383)
Q Consensus 2 ~iLGV~~~As~~EIK--------------------kFkeI~~AYevLsD~~kR~~YD~~G~~ 43 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|++
T Consensus 12 ~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 12 DVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 589999999999999 899999999999999999999999863
No 17
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=2.9e-12 Score=98.62 Aligned_cols=43 Identities=47% Similarity=0.787 Sum_probs=40.8
Q ss_pred cccCCCCCCCHHHHH----------------------HHHHHHHHHHhcCCccccchhcccCchh
Q 016758 2 RFSESRKNASQDDLK----------------------KFKELAQAYEVLSDPEKREIYDQYGEDA 44 (383)
Q Consensus 2 ~iLGV~~~As~~EIK----------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~ 44 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|..+
T Consensus 11 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 11 EILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 589999999999999 8999999999999999999999999754
No 18
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.22 E-value=2.7e-12 Score=99.06 Aligned_cols=43 Identities=51% Similarity=0.783 Sum_probs=40.7
Q ss_pred cccCCCCCCCHHHHH-----------------------HHHHHHHHHHhcCCccccchhcccCchh
Q 016758 2 RFSESRKNASQDDLK-----------------------KFKELAQAYEVLSDPEKREIYDQYGEDA 44 (383)
Q Consensus 2 ~iLGV~~~As~~EIK-----------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~ 44 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|..+
T Consensus 11 ~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 11 QILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 589999999999999 8999999999999999999999999754
No 19
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=5.3e-12 Score=100.28 Aligned_cols=46 Identities=43% Similarity=0.692 Sum_probs=43.1
Q ss_pred cccCCCCCCCHHHHH------------------------HHHHHHHHHHhcCCccccchhcccCchhhcc
Q 016758 2 RFSESRKNASQDDLK------------------------KFKELAQAYEVLSDPEKREIYDQYGEDALKE 47 (383)
Q Consensus 2 ~iLGV~~~As~~EIK------------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~~~~ 47 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|..++..
T Consensus 13 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 13 EVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp HHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 689999999999999 7999999999999999999999999877654
No 20
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.18 E-value=3.6e-12 Score=102.79 Aligned_cols=46 Identities=57% Similarity=0.906 Sum_probs=40.7
Q ss_pred cccCCCCCCCHHHHH------------------------HHHHHHHHHHhcCCccccchhcccCchhhcc
Q 016758 2 RFSESRKNASQDDLK------------------------KFKELAQAYEVLSDPEKREIYDQYGEDALKE 47 (383)
Q Consensus 2 ~iLGV~~~As~~EIK------------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~~~~ 47 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|.+++.+
T Consensus 6 ~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 6 EILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp HHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 689999999999999 7999999999999999999999999877753
No 21
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.16 E-value=7.8e-12 Score=98.54 Aligned_cols=43 Identities=44% Similarity=0.763 Sum_probs=40.5
Q ss_pred cccCCCCCCCHHHHH----------------------HHHHHHHHHHhcCCccccchhcccCchh
Q 016758 2 RFSESRKNASQDDLK----------------------KFKELAQAYEVLSDPEKREIYDQYGEDA 44 (383)
Q Consensus 2 ~iLGV~~~As~~EIK----------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~ 44 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|+.+
T Consensus 21 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 21 RVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 589999999999999 7999999999999999999999998753
No 22
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.14 E-value=1.5e-11 Score=100.92 Aligned_cols=45 Identities=47% Similarity=0.708 Sum_probs=42.7
Q ss_pred cccCCCCCCCHHHHH-----------------------HHHHHHHHHHhcCCccccchhcccCchhhc
Q 016758 2 RFSESRKNASQDDLK-----------------------KFKELAQAYEVLSDPEKREIYDQYGEDALK 46 (383)
Q Consensus 2 ~iLGV~~~As~~EIK-----------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~~~ 46 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|..++.
T Consensus 21 ~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 21 HVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 689999999999999 899999999999999999999999988765
No 23
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=3.2e-11 Score=97.17 Aligned_cols=45 Identities=29% Similarity=0.500 Sum_probs=40.4
Q ss_pred cccCCCCCCCHHHHH-----------------------HHHHHHHHHHhcCCccccchhccc--Cchhhc
Q 016758 2 RFSESRKNASQDDLK-----------------------KFKELAQAYEVLSDPEKREIYDQY--GEDALK 46 (383)
Q Consensus 2 ~iLGV~~~As~~EIK-----------------------kFkeI~~AYevLsD~~kR~~YD~~--G~~~~~ 46 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++ +.+.+.
T Consensus 21 ~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~e~~~ 90 (99)
T 2yua_A 21 DLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDLR 90 (99)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCHHHHH
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcccccccc
Confidence 689999999999999 899999999999999999999984 445544
No 24
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=1.1e-11 Score=102.09 Aligned_cols=45 Identities=22% Similarity=0.436 Sum_probs=42.3
Q ss_pred cccCCCCCCCHHHHH-----------------------HHHHHHHHHHhcCCccccchhcccCchhhc
Q 016758 2 RFSESRKNASQDDLK-----------------------KFKELAQAYEVLSDPEKREIYDQYGEDALK 46 (383)
Q Consensus 2 ~iLGV~~~As~~EIK-----------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~~~ 46 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||++|..++.
T Consensus 24 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 24 TLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp HHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 689999999999999 899999999999999999999999987654
No 25
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.11 E-value=2.7e-11 Score=109.74 Aligned_cols=63 Identities=33% Similarity=0.667 Sum_probs=51.4
Q ss_pred cccCCCCCCCHHHHH-----------------------HHHHHHHHHHhcCCccccchhcccCchhhccCcCCCCCCCCc
Q 016758 2 RFSESRKNASQDDLK-----------------------KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGAHDP 58 (383)
Q Consensus 2 ~iLGV~~~As~~EIK-----------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~~~~g~~~~~~~~~~ 58 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||+||+.++..+. ++....
T Consensus 6 ~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~---~~~~~~ 82 (210)
T 3apq_A 6 SLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ---GGQYES 82 (210)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTC---SCCCCC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccccc---cccccc
Confidence 589999999999999 899999999999999999999999998876432 122334
Q ss_pred cchhhcccC
Q 016758 59 FDIFQSFFG 67 (383)
Q Consensus 59 ~d~F~~~Fg 67 (383)
+.+|...|+
T Consensus 83 ~~~~~~~fg 91 (210)
T 3apq_A 83 WSYYRYDFG 91 (210)
T ss_dssp HHHHHHSSS
T ss_pred ccccccccc
Confidence 556666664
No 26
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.03 E-value=8.3e-11 Score=93.59 Aligned_cols=40 Identities=33% Similarity=0.511 Sum_probs=38.3
Q ss_pred cccCCCCCCCHHHHH-----------------------------HHHHHHHHHHhcCCccccchhcccC
Q 016758 2 RFSESRKNASQDDLK-----------------------------KFKELAQAYEVLSDPEKREIYDQYG 41 (383)
Q Consensus 2 ~iLGV~~~As~~EIK-----------------------------kFkeI~~AYevLsD~~kR~~YD~~G 41 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||.+.
T Consensus 20 ~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l 88 (94)
T 1wjz_A 20 SILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp HHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 689999999999999 8999999999999999999999865
No 27
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=98.92 E-value=1.4e-10 Score=94.86 Aligned_cols=41 Identities=32% Similarity=0.559 Sum_probs=39.1
Q ss_pred cccCCCCCC-CHHHHH--------------------------HHHHHHHHHHhcCCccccchhcccCc
Q 016758 2 RFSESRKNA-SQDDLK--------------------------KFKELAQAYEVLSDPEKREIYDQYGE 42 (383)
Q Consensus 2 ~iLGV~~~A-s~~EIK--------------------------kFkeI~~AYevLsD~~kR~~YD~~G~ 42 (383)
+||||+++| |.+||| +|++|++||+||+||.+|+.||+++.
T Consensus 19 ~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 19 DVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp HHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred HHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 689999999 999999 79999999999999999999999875
No 28
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.88 E-value=1.5e-09 Score=88.85 Aligned_cols=52 Identities=25% Similarity=0.354 Sum_probs=43.8
Q ss_pred EEEEeccCcccCCEEEecCCcCCCCCCCcccEEEEEEEeeCCccccccccccc
Q 016758 188 LEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFV 240 (383)
Q Consensus 188 l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~vk~h~~f~R~g~dL~~ 240 (383)
++|+||+|+++|++++++|+|++..+ ..|||||+|+|..+..+..+...|+.
T Consensus 40 ~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~~V~~P~~Ls~~q~~~l~ 91 (109)
T 3i38_A 40 ILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVIKIVMPTKPDEKARELWQ 91 (109)
T ss_dssp EEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEEEECCCSSCCHHHHHHHH
T ss_pred EEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEEEEECCCCCCHHHHHHHH
Confidence 67999999999999999999998754 78999999999988876655554443
No 29
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=98.88 E-value=2.5e-10 Score=94.23 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=39.2
Q ss_pred cccCCCCCCCH--HHHH-------------------HHHHHHHHHHhcCCccccchhcccCc
Q 016758 2 RFSESRKNASQ--DDLK-------------------KFKELAQAYEVLSDPEKREIYDQYGE 42 (383)
Q Consensus 2 ~iLGV~~~As~--~EIK-------------------kFkeI~~AYevLsD~~kR~~YD~~G~ 42 (383)
+||||+++|+. +||| +|++|++||+||+||.+|+.||.||.
T Consensus 12 ~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 12 DLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred HHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 68999999999 9999 89999999999999999999999885
No 30
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=98.87 E-value=1.8e-10 Score=101.64 Aligned_cols=41 Identities=17% Similarity=0.240 Sum_probs=39.0
Q ss_pred cccCCCCCCC--HHHHH-------------------HHHHHHHHHHhcCCccccchhcccCc
Q 016758 2 RFSESRKNAS--QDDLK-------------------KFKELAQAYEVLSDPEKREIYDQYGE 42 (383)
Q Consensus 2 ~iLGV~~~As--~~EIK-------------------kFkeI~~AYevLsD~~kR~~YD~~G~ 42 (383)
+||||+++|| .+||| +|++|++||+|||||.+|+.||+||.
T Consensus 15 ~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 15 DLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred HHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 6899999999 69999 89999999999999999999999985
No 31
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=98.78 E-value=1.5e-09 Score=83.72 Aligned_cols=42 Identities=7% Similarity=0.095 Sum_probs=38.0
Q ss_pred cccCCCCC--CCHHHHH-------------------HHHHHHHHHHhcCCccccchhcccCchh
Q 016758 2 RFSESRKN--ASQDDLK-------------------KFKELAQAYEVLSDPEKREIYDQYGEDA 44 (383)
Q Consensus 2 ~iLGV~~~--As~~EIK-------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~ 44 (383)
+||||+++ ||.+||| +|++|++||+||+|+.+|.. |.||.++
T Consensus 15 ~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 15 ELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 58999999 9999999 89999999999999999988 5677654
No 32
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=98.78 E-value=2.1e-09 Score=93.41 Aligned_cols=41 Identities=32% Similarity=0.455 Sum_probs=38.5
Q ss_pred cccCCCCCCCHHHHH-----------------------------HHHHHHHHHHhcCCccccchhcccCc
Q 016758 2 RFSESRKNASQDDLK-----------------------------KFKELAQAYEVLSDPEKREIYDQYGE 42 (383)
Q Consensus 2 ~iLGV~~~As~~EIK-----------------------------kFkeI~~AYevLsD~~kR~~YD~~G~ 42 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.||.++.
T Consensus 14 ~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 14 SILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred HhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 589999999999999 79999999999999999999998653
No 33
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.73 E-value=1.1e-08 Score=85.26 Aligned_cols=54 Identities=15% Similarity=0.180 Sum_probs=41.3
Q ss_pred EEEEEeccC--cccCCEEEecCCcCCCCCC-CcccEEEEEEEeeCCc--cccccccccc
Q 016758 187 VLEVIVEKG--MQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPK--FKRKGDDLFV 240 (383)
Q Consensus 187 ~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GDliv~i~vk~h~~--f~R~g~dL~~ 240 (383)
.++|+||+| +++|++++++|+|++..+. ..|||||+|+|..+.. +..+..+|+.
T Consensus 35 ~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~l~ 93 (121)
T 1xao_A 35 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKKLE 93 (121)
T ss_dssp EEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHHHH
T ss_pred EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
Confidence 578999999 9999999999999985432 6799999999998876 6655544433
No 34
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.71 E-value=1.8e-09 Score=116.01 Aligned_cols=47 Identities=36% Similarity=0.680 Sum_probs=33.4
Q ss_pred cccCCCCCCCHHHHH-----------------------HHHHHHHHHHhcCCccccchhcccCchhhccC
Q 016758 2 RFSESRKNASQDDLK-----------------------KFKELAQAYEVLSDPEKREIYDQYGEDALKEG 48 (383)
Q Consensus 2 ~iLGV~~~As~~EIK-----------------------kFkeI~~AYevLsD~~kR~~YD~~G~~~~~~g 48 (383)
+||||+++||.+||| +|++|++||+|||||.+|+.||+||++++..+
T Consensus 25 ~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 25 SLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp HHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 589999999999999 79999999999999999999999999888654
No 35
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.57 E-value=1.6e-08 Score=79.83 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=33.2
Q ss_pred cccCCCCCCCHHHHH----------------------HHHHHHHHHHhcCCccccch
Q 016758 2 RFSESRKNASQDDLK----------------------KFKELAQAYEVLSDPEKREI 36 (383)
Q Consensus 2 ~iLGV~~~As~~EIK----------------------kFkeI~~AYevLsD~~kR~~ 36 (383)
+||||+++||.+||| +|++|++||+||+||.+|+.
T Consensus 31 ~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 31 DMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 589999999999999 89999999999999999974
No 36
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=98.54 E-value=1.9e-08 Score=88.81 Aligned_cols=40 Identities=18% Similarity=0.129 Sum_probs=37.6
Q ss_pred cccCCCCCC--CHHHHH----------------------------HHHHHHHHHHhcCCccccchhcccC
Q 016758 2 RFSESRKNA--SQDDLK----------------------------KFKELAQAYEVLSDPEKREIYDQYG 41 (383)
Q Consensus 2 ~iLGV~~~A--s~~EIK----------------------------kFkeI~~AYevLsD~~kR~~YD~~G 41 (383)
+||||+++| |.++|| +|++|++||+|||||.+|+.||...
T Consensus 5 ~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 5 TLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 589999999 999999 6999999999999999999999853
No 37
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=98.49 E-value=3.4e-08 Score=87.41 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=36.4
Q ss_pred cccCCCCCCC--HHHHH----------------------------HHHHHHHHHHhcCCccccchhcc
Q 016758 2 RFSESRKNAS--QDDLK----------------------------KFKELAQAYEVLSDPEKREIYDQ 39 (383)
Q Consensus 2 ~iLGV~~~As--~~EIK----------------------------kFkeI~~AYevLsD~~kR~~YD~ 39 (383)
+||||+++|| .++|| +|++|++||+||+||.+|+.||.
T Consensus 8 ~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~ 75 (174)
T 3hho_A 8 ELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLL 75 (174)
T ss_dssp HHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 5899999999 99999 79999999999999999999997
No 38
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=98.47 E-value=4.4e-08 Score=89.02 Aligned_cols=38 Identities=18% Similarity=0.332 Sum_probs=35.4
Q ss_pred cccCCCCC--CCHHHHH----------------------------HHHHHHHHHHhcCCccccchhcc
Q 016758 2 RFSESRKN--ASQDDLK----------------------------KFKELAQAYEVLSDPEKREIYDQ 39 (383)
Q Consensus 2 ~iLGV~~~--As~~EIK----------------------------kFkeI~~AYevLsD~~kR~~YD~ 39 (383)
+||||+++ ||.+||| +|++|++||+|||||.+|+.||.
T Consensus 47 ~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 47 SLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp HHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 58999987 7999999 68999999999999999999995
No 39
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.43 E-value=2.6e-07 Score=81.40 Aligned_cols=72 Identities=19% Similarity=0.131 Sum_probs=59.7
Q ss_pred cccccccCCHHHHhCCCEEEEEcc----CC----CEEEEEcCCCCcccCCcEEEEcCCCCCCCCCCCCCCceEEEEEEeC
Q 016758 237 DLFVEHTLSLTEALCGFQFVITHL----DG----RQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDF 308 (383)
Q Consensus 237 dL~~~~~I~l~eAl~G~~~~i~tl----dG----~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~f~V~~ 308 (383)
|+.+++.|||.||+.|+++.|..- +| +.+.|+||+| +..|+.++++|+|-+-.. ....|||||.++|.-
T Consensus 2 d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~~~~-gg~~GDl~v~i~v~~ 78 (170)
T 1c3g_A 2 TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPG--WKAGTKITYKNQGDYNPQ-TGRRKTLQFVIQEKS 78 (170)
T ss_dssp EEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTT--CCTTCEEEESSCSSBCSS-SSCBCEEEEEEEECC
T ss_pred CEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCC--ccCCCEEEEeccccCCCC-CCccccEEEEEEEcc
Confidence 788999999999999999887633 23 7899999999 899999999999986432 345799999999985
Q ss_pred CCC
Q 016758 309 PES 311 (383)
Q Consensus 309 P~~ 311 (383)
.+.
T Consensus 79 h~~ 81 (170)
T 1c3g_A 79 HPN 81 (170)
T ss_dssp CSS
T ss_pred CCc
Confidence 544
No 40
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.41 E-value=2.9e-07 Score=81.82 Aligned_cols=74 Identities=16% Similarity=0.095 Sum_probs=60.7
Q ss_pred cccccccccCCHHHHhCCCEEEEEcc-----------CCCEEEEEcCCCCcccCCcEEEEcCCCCC-CCCCCCCCCceEE
Q 016758 235 GDDLFVEHTLSLTEALCGFQFVITHL-----------DGRQLLIKSQPGEVVKPDQFKAINDEGMP-MYQRPFMRGKLYI 302 (383)
Q Consensus 235 g~dL~~~~~I~l~eAl~G~~~~i~tl-----------dG~~l~i~ip~g~vi~~g~~~~i~g~Gmp-~~~~~~~~GdL~i 302 (383)
+.|+.+++.|||.||+.|+++.|..- ..+.+.|.||+| ++.|+.++++|+|-+ .. ....|||||
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~g~~--gg~~GDl~v 78 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPG--WKDGTKLTYSGEGDQESP--GTSPGDLVL 78 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTT--CCTTCEEEETTCSCCSST--TSCCCEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCC--CcCCcEEEEeeccCCCCC--CCccccEEE
Confidence 67999999999999999998877632 247799999999 899999999999987 33 235799999
Q ss_pred EEEEeCCCCC
Q 016758 303 HFTVDFPESL 312 (383)
Q Consensus 303 ~f~V~~P~~l 312 (383)
.++|.-.+.+
T Consensus 79 ~i~~~~h~~F 88 (180)
T 2q2g_A 79 IIQTKTHPRF 88 (180)
T ss_dssp EEEECCCSSC
T ss_pred EEEEEecccE
Confidence 9999854443
No 41
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.38 E-value=2.7e-07 Score=89.62 Aligned_cols=77 Identities=22% Similarity=0.207 Sum_probs=60.0
Q ss_pred ccccccccccccCCHHHHhCCCEEEEEcc------C-------CCEEEEEcCCCCcccCCcEEEEcCCCCCCCCCCCCCC
Q 016758 232 KRKGDDLFVEHTLSLTEALCGFQFVITHL------D-------GRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRG 298 (383)
Q Consensus 232 ~R~g~dL~~~~~I~l~eAl~G~~~~i~tl------d-------G~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~G 298 (383)
.++|.||.+++.|+|.||+.|.++.|..- . .+.|.|+|||| +++|+.++++|+|.|..+ ....|
T Consensus 137 ~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~G--v~~G~~Irl~G~G~~g~~-gg~~G 213 (329)
T 3lz8_A 137 AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAG--VVDGQRIRLKGQGTPGEN-GGPNG 213 (329)
T ss_dssp CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTT--CCTTCEEEESSCSCCC----CCCC
T ss_pred cCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCC--CCCCCEEEEcccccCCCC-CCCCC
Confidence 35688999999999999999987665432 2 34688999999 799999999999998642 24589
Q ss_pred ceEEEEEEeCCCC
Q 016758 299 KLYIHFTVDFPES 311 (383)
Q Consensus 299 dL~i~f~V~~P~~ 311 (383)
||||+++|.-.+.
T Consensus 214 DL~v~I~v~~h~~ 226 (329)
T 3lz8_A 214 DLWLVIHIAPHPL 226 (329)
T ss_dssp CEEEEECCCCCSS
T ss_pred cEEEEEEEecCCc
Confidence 9999998875443
No 42
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.36 E-value=1.2e-07 Score=71.31 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=31.4
Q ss_pred cccCCCC-CCCHHHHH-------------------HHHHHHHHHHhcCCccccc
Q 016758 2 RFSESRK-NASQDDLK-------------------KFKELAQAYEVLSDPEKRE 35 (383)
Q Consensus 2 ~iLGV~~-~As~~EIK-------------------kFkeI~~AYevLsD~~kR~ 35 (383)
+||||++ +||.+||| +|++|++||+||+|+..|+
T Consensus 18 ~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 18 QILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhhcC
Confidence 5899999 79999999 8999999999999988774
No 43
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.33 E-value=1.1e-06 Score=78.14 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=58.8
Q ss_pred cccccccccCCHHHHhCCCEEEEEcc------CC-------CEEEEEcCCCCcccCCcEEEEcCCCCCCCCCCCCCCceE
Q 016758 235 GDDLFVEHTLSLTEALCGFQFVITHL------DG-------RQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLY 301 (383)
Q Consensus 235 g~dL~~~~~I~l~eAl~G~~~~i~tl------dG-------~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~ 301 (383)
+.|+.+++.|||.||+.|.++.|.-- .| +.+.|+||+| +..|+.++++|+|-+..+ +..||||
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G--~~~G~~ir~~G~G~~~~~--g~~GDl~ 77 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKG--WKEGTKITFPKEGDQTSN--NIPADIV 77 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTT--CCTTCEEEETTCSCCCSS--SCCCCEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCC--ccCCcEEEEeeccccCCC--CCcccEE
Confidence 46899999999999999998776532 34 6799999999 899999999999987653 3579999
Q ss_pred EEEEEeCCCCCC
Q 016758 302 IHFTVDFPESLS 313 (383)
Q Consensus 302 i~f~V~~P~~l~ 313 (383)
|.++|.-.+.+.
T Consensus 78 v~i~~~~h~~F~ 89 (181)
T 3agx_A 78 FVLKDKPHNIFK 89 (181)
T ss_dssp EEEEECCCSSCE
T ss_pred EEEEEeccccce
Confidence 999998555443
No 44
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=98.30 E-value=8.5e-08 Score=75.31 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=32.8
Q ss_pred cccCCCCCCCHHHHH------------------------HHHHHHHHHHhcCCccccchh
Q 016758 2 RFSESRKNASQDDLK------------------------KFKELAQAYEVLSDPEKREIY 37 (383)
Q Consensus 2 ~iLGV~~~As~~EIK------------------------kFkeI~~AYevLsD~~kR~~Y 37 (383)
+||||+++||.+||| +|++|++||+||+|...|..+
T Consensus 20 ~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 20 SVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp HHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 689999999999999 899999999999999887433
No 45
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=98.17 E-value=3e-07 Score=81.74 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=34.6
Q ss_pred ccc------CCCC-CCCHHHHH--------------------HHHHHHHHHHhcCCccccchhcc
Q 016758 2 RFS------ESRK-NASQDDLK--------------------KFKELAQAYEVLSDPEKREIYDQ 39 (383)
Q Consensus 2 ~iL------GV~~-~As~~EIK--------------------kFkeI~~AYevLsD~~kR~~YD~ 39 (383)
+|| |+++ +||.+||| +|++|++||+|||||.+|+.||.
T Consensus 15 ~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~ 79 (181)
T 3uo3_A 15 ELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYML 79 (181)
T ss_dssp GGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHH
T ss_pred HHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 578 4654 99999999 89999999999999999999998
No 46
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=98.02 E-value=3.1e-06 Score=64.69 Aligned_cols=58 Identities=31% Similarity=0.766 Sum_probs=43.8
Q ss_pred hhcccceeeecceeeeeCCCCCCCCcccC------ceeeCCCCcccceEEEEEecCCcceeeeeccCCCCcceeEEEc
Q 016758 97 DLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN 168 (383)
Q Consensus 97 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~ 168 (383)
..++|.... .......|+.|+|+|.... ...+|+.|+|+|.++ ..+|+.|+|.|.+..
T Consensus 15 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~G~~~~ 78 (79)
T 1exk_A 15 DVCHGSGAK-PGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI-------------KDPCNKCHGHGRVER 78 (79)
T ss_dssp GGGTTTSBC-SSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC-------------SSBCGGGTTSSEEEC
T ss_pred CCCcccccC-CCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEEC-------------CCcCCCCCCeEEEee
Confidence 556776643 2344578999999997642 125899999999864 679999999999853
No 47
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.02 E-value=3.3e-06 Score=68.12 Aligned_cols=60 Identities=28% Similarity=0.692 Sum_probs=45.1
Q ss_pred hhcccceeeecceeeeeCCCCCCCCccc---C---ceeeCCCCcccceEEEEEecCCcceeeeeccCCCCcceeEEEcCC
Q 016758 97 DLYNGTSKKLSLSRNVICTKCKGKGSKS---G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK 170 (383)
Q Consensus 97 e~~~G~~~~i~~~r~~~C~~C~G~G~~~---~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~ 170 (383)
+.+.|...+ .-.....|+.|+|+|... + ...+|+.|+|+|.++ ..+|+.|+|+|.+...+
T Consensus 32 ~~C~G~G~~-~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i-------------~~~C~~C~G~G~v~~~k 97 (104)
T 2ctt_A 32 ERCNGKGNE-PGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII-------------ISPCVVCRGAGQAKQKK 97 (104)
T ss_dssp SSSSSSSSC-TTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC-------------SSCCSSSSSCSEECCCC
T ss_pred CCCcCCccC-CCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC-------------CCcCCCCCCeeEEEEEE
Confidence 556776544 334457899999999653 2 236899999999864 68999999999987643
No 48
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=98.00 E-value=1.5e-06 Score=68.64 Aligned_cols=29 Identities=17% Similarity=0.272 Sum_probs=27.1
Q ss_pred cccCCCCCCCHHHHH--------------------------HHHHHHHHHHhcCC
Q 016758 2 RFSESRKNASQDDLK--------------------------KFKELAQAYEVLSD 30 (383)
Q Consensus 2 ~iLGV~~~As~~EIK--------------------------kFkeI~~AYevLsD 30 (383)
++|||+++||++||| +|++|++|||||.+
T Consensus 37 ~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 37 KPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 589999999999999 79999999999975
No 49
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.74 E-value=5.8e-06 Score=58.37 Aligned_cols=33 Identities=30% Similarity=0.859 Sum_probs=27.1
Q ss_pred eeeeccCCCCcceeEEEcCCCCCCCCCCceEEEEc
Q 016758 151 QQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEK 185 (383)
Q Consensus 151 ~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~ 185 (383)
||++.+|+.|+|+|.++. ++|+.|+|.|++.+.
T Consensus 6 qq~~~~C~~C~GsG~~i~--~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 6 DDLETTCPNCNGSGREEP--EPCPKCLGKGVILTA 38 (53)
T ss_dssp HHHEEECTTTTTSCEETT--EECTTTTTSSEEECH
T ss_pred CceeccCcCCcccccCCC--CcCCCCCCcEEEEEE
Confidence 567888999999998876 889999999887664
No 50
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.57 E-value=7.2e-07 Score=93.48 Aligned_cols=78 Identities=17% Similarity=0.220 Sum_probs=58.8
Q ss_pred eeeEEEehhhhcccceeeecceeeeeCCCCCCCCcccCc----eeeCCCCcccceEE--------EEEecCCcceeeeec
Q 016758 88 IHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGA----SMKCSGCQGSGMKV--------SIRHLGPSMIQQMQH 155 (383)
Q Consensus 88 ~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~----~~~C~~C~G~G~~~--------~~~~~gpg~~~~~~~ 155 (383)
.+.+.++|+|+..|..+++.+.+...|..|+|+|++.+. ..+|+.|+|+.... ..+.+-.|.+-+...
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~ 247 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS 247 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence 468899999999999999999999999999999998875 47999999994110 001111122224467
Q ss_pred cCCCCcceeE
Q 016758 156 PCNECKGTGE 165 (383)
Q Consensus 156 ~C~~C~G~G~ 165 (383)
.|..|+..+.
T Consensus 248 ~C~~CH~~~~ 257 (669)
T 3pmq_A 248 NCQTCHADNP 257 (669)
T ss_dssp CCTTTSCCCT
T ss_pred cchhhcCCcc
Confidence 8999998774
No 51
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.09 E-value=0.00022 Score=50.20 Aligned_cols=26 Identities=31% Similarity=0.870 Sum_probs=13.6
Q ss_pred eeCCCCCCCCcccCceeeCCCCcccceE
Q 016758 112 VICTKCKGKGSKSGASMKCSGCQGSGMK 139 (383)
Q Consensus 112 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~ 139 (383)
..|+.|+|+|.... .+|+.|+|+|.+
T Consensus 10 ~~C~~C~GsG~~i~--~~C~~C~G~G~v 35 (53)
T 3lcz_A 10 TTCPNCNGSGREEP--EPCPKCLGKGVI 35 (53)
T ss_dssp EECTTTTTSCEETT--EECTTTTTSSEE
T ss_pred ccCcCCcccccCCC--CcCCCCCCcEEE
Confidence 45666666654432 445555555543
No 52
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.99 E-value=0.00028 Score=49.67 Aligned_cols=28 Identities=36% Similarity=0.935 Sum_probs=17.5
Q ss_pred eeeCCCCCCCCcccCceeeCCCCcccceEE
Q 016758 111 NVICTKCKGKGSKSGASMKCSGCQGSGMKV 140 (383)
Q Consensus 111 ~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~ 140 (383)
...|+.|+|+|.... .+|+.|+|+|.++
T Consensus 9 ~~~C~~C~GsG~~~~--~~C~~C~G~G~v~ 36 (53)
T 2bx9_A 9 EVACPKCERAGEIEG--TPCPACSGKGVIL 36 (53)
T ss_dssp EEECTTTTTSSEETT--EECTTTTTSSEEE
T ss_pred cccCCCCcceeccCC--CCCccCCCCccEE
Confidence 346777777776542 4666666666654
No 53
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.92 E-value=0.00066 Score=47.72 Aligned_cols=29 Identities=28% Similarity=0.790 Sum_probs=25.1
Q ss_pred eeeCCCCcccceEEEEEecCCcceeeeeccCCCCcceeEEEc
Q 016758 127 SMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN 168 (383)
Q Consensus 127 ~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~ 168 (383)
..+|+.|+|+|.++ ..+|+.|+|+|.++.
T Consensus 9 ~~~C~~C~GsG~~~-------------~~~C~~C~G~G~v~~ 37 (53)
T 2bx9_A 9 EVACPKCERAGEIE-------------GTPCPACSGKGVILT 37 (53)
T ss_dssp EEECTTTTTSSEET-------------TEECTTTTTSSEEEC
T ss_pred cccCCCCcceeccC-------------CCCCccCCCCccEEE
Confidence 46899999999863 578999999999875
No 54
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=95.32 E-value=0.0092 Score=43.65 Aligned_cols=28 Identities=14% Similarity=0.172 Sum_probs=25.3
Q ss_pred cccCCCCC---CCHHHHH-------------------HHHHHHHHHHhcC
Q 016758 2 RFSESRKN---ASQDDLK-------------------KFKELAQAYEVLS 29 (383)
Q Consensus 2 ~iLGV~~~---As~~EIK-------------------kFkeI~~AYevLs 29 (383)
.||||+++ ||.++|| .+..|++|+|+|-
T Consensus 8 ~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~ 57 (65)
T 2guz_B 8 KILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLK 57 (65)
T ss_dssp HHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 59999999 9999999 5789999999994
No 55
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=65.80 E-value=2.2 Score=37.32 Aligned_cols=15 Identities=7% Similarity=0.060 Sum_probs=14.3
Q ss_pred cccCCCCCCCHHHHH
Q 016758 2 RFSESRKNASQDDLK 16 (383)
Q Consensus 2 ~iLGV~~~As~~EIK 16 (383)
+||||+++||.+|||
T Consensus 121 ~vLgv~~~As~~eIK 135 (182)
T 1n4c_A 121 KPVGMADLVTPEQVK 135 (182)
T ss_dssp CCCCGGGGSSHHHHH
T ss_pred hcCCCCCCCCHHHHH
Confidence 689999999999999
No 56
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=55.92 E-value=51 Score=30.25 Aligned_cols=34 Identities=26% Similarity=0.612 Sum_probs=17.3
Q ss_pred eeCCCCcccceEEEEEecCCcceeeeeccCCCCcceeEE
Q 016758 128 MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET 166 (383)
Q Consensus 128 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~ 166 (383)
-.|..|+-.. ...+... .+ .....|+.|..+|..
T Consensus 135 f~C~~C~~~~---~v~~~~~-~~-~~P~~Cp~C~~~~f~ 168 (279)
T 1ltl_A 135 FECRGCMRHH---AVTQSTN-MI-TEPSLCSECGGRSFR 168 (279)
T ss_dssp EEETTTCCEE---EEECSSS-SC-CCCSCCTTTCCCCEE
T ss_pred EEcCCCCCEE---EEEecCC-cc-cCCCcCCCCCCCCcE
Confidence 4688887432 2222222 11 223467777777743
No 57
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=50.18 E-value=8.6 Score=30.32 Aligned_cols=14 Identities=0% Similarity=-0.033 Sum_probs=12.5
Q ss_pred cccCCCCCCCHHHHH
Q 016758 2 RFSESRKNASQDDLK 16 (383)
Q Consensus 2 ~iLGV~~~As~~EIK 16 (383)
+||||+. ||.+|||
T Consensus 45 ~vl~~~~-As~~eIK 58 (106)
T 3ag7_A 45 PVPLMDM-IEGNAVR 58 (106)
T ss_dssp CCCGGGS-CSHHHHH
T ss_pred HHcCCCC-CCHHHHH
Confidence 5899986 9999999
No 58
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=42.23 E-value=32 Score=31.68 Aligned_cols=18 Identities=33% Similarity=0.305 Sum_probs=10.8
Q ss_pred cCCCCCCCcccEEEEEEE
Q 016758 208 ADEAPDTVTGDIVFVLQQ 225 (383)
Q Consensus 208 G~~~~~~~~GDliv~i~v 225 (383)
++-.....|||.+.+.-+
T Consensus 206 ~dLvd~~~PGDrV~vtGI 223 (279)
T 1ltl_A 206 DDLVDTLTPGDIVRVTGT 223 (279)
T ss_dssp GGGTTCCCTTCEEEEEEE
T ss_pred ccccCccCCCCEEEEEEE
Confidence 333445678988775544
No 59
>2bx2_L Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonu nuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A
Probab=41.43 E-value=5.8 Score=40.24 Aligned_cols=29 Identities=34% Similarity=0.689 Sum_probs=20.9
Q ss_pred EEEEecCCcceeeeeccCCCCcceeEEEc
Q 016758 140 VSIRHLGPSMIQQMQHPCNECKGTGETIN 168 (383)
Q Consensus 140 ~~~~~~gpg~~~~~~~~C~~C~G~G~~~~ 168 (383)
+..++.+|.+...+..+|+.|+|+|.+..
T Consensus 394 mTRkR~r~sL~e~~~~~Cp~C~G~G~v~s 422 (517)
T 2bx2_L 394 MSRQRLSPSLGESSHHVCPRCSGTGTVRD 422 (517)
T ss_dssp EEECCCSCCHHHHHCCCCSSSSSSSCCCC
T ss_pred EeecCcCcChhhhhcCcCCCcCCceeECC
Confidence 33445677777777788999999997654
No 60
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=40.70 E-value=7.9 Score=31.42 Aligned_cols=38 Identities=21% Similarity=0.311 Sum_probs=31.5
Q ss_pred cccCCCCCCC--HHHHH-HHHHHHHHHHhcCCccccchhcc
Q 016758 2 RFSESRKNAS--QDDLK-KFKELAQAYEVLSDPEKREIYDQ 39 (383)
Q Consensus 2 ~iLGV~~~As--~~EIK-kFkeI~~AYevLsD~~kR~~YD~ 39 (383)
+.||+++.++ ...+| .+..+=.+||.+++.+|++..|.
T Consensus 71 ~~lg~p~~~~sa~~~Lr~~Y~k~L~~YE~~~~~e~~~l~~~ 111 (121)
T 2rq5_A 71 DMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKE 111 (121)
T ss_dssp HHTCCCTTCSSHHHHHHHHHHTTHHHHHHCCHHHHHHHHHH
T ss_pred HHhCCCCCcCcHHHHHHHHHHHHhHHHHCcCHHHHhhHHHH
Confidence 4689998775 44677 78889999999999999998875
No 61
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=39.50 E-value=55 Score=29.75 Aligned_cols=65 Identities=17% Similarity=0.179 Sum_probs=30.5
Q ss_pred eccCCCCcceeEEEcCCCCCCCCCCceEEEEcEEEEEEecc-CcccCC---EEEecCCcCCCCCCCcccEEEEEEE
Q 016758 154 QHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEK-GMQNGQ---KITFPGEADEAPDTVTGDIVFVLQQ 225 (383)
Q Consensus 154 ~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~-G~~~G~---~i~~~g~G~~~~~~~~GDliv~i~v 225 (383)
...|+.|..+|...-.-+.| .......++|.=.| .++.|+ .+.+.=.++-.....|||-+.+.=+
T Consensus 168 P~~Cp~C~~~~~~~l~~~~s-------~f~D~Q~ikiQE~pe~vp~G~~Prsi~v~l~~dLvd~~~PGDrV~vtGI 236 (268)
T 2vl6_A 168 PTICPKCGKPGQFRLIPEKT-------KLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGI 236 (268)
T ss_dssp CSBCTTTCCBCEEEECGGGC-------EEEEEEEEEEECCGGGSCTTSCCCEEEEEEEGGGTTSSCTTCEEEEEEE
T ss_pred CccCCCCCCCCCEEEecCcc-------EEEeeEEEEEEeCCCCCCCCCCCcEEEEEEccCccCcccCCCEEEEEEE
Confidence 35688888776332211222 22334455553222 233333 1222223443445679998775443
No 62
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=38.32 E-value=59 Score=26.86 Aligned_cols=40 Identities=13% Similarity=0.204 Sum_probs=30.7
Q ss_pred HhCCCEEEEEccCCC-EEEEEcCCCCcccCCcEEEEcCCCCC
Q 016758 249 ALCGFQFVITHLDGR-QLLIKSQPGEVVKPDQFKAINDEGMP 289 (383)
Q Consensus 249 Al~G~~~~i~tldG~-~l~i~ip~g~vi~~g~~~~i~g~Gmp 289 (383)
.|-|+++.= ..||+ .+..+.|++-+++||..++|-..|.-
T Consensus 47 ~L~GW~L~r-~v~g~~~~~y~Fp~~~~L~pg~~VtIws~~~g 87 (139)
T 2lll_A 47 SLGNWRIKR-QVLEGEEIAYKFTPKYILRAGQMVTVWAAGAG 87 (139)
T ss_dssp ECSSCEEEE-EETTSCEEEEECCTTCEECTTCEEEEEEGGGT
T ss_pred ccCCCEEEE-ecCCCccEEEEECCCcEECCCCEEEEEeCCCC
Confidence 566777664 34554 37789999999999999999988753
No 63
>3pr6_A Trapp-associated protein TCA17; longin fold, vesicle tethering regulation, trapp complex, TR network, transport protein; 1.80A {Saccharomyces cerevisiae}
Probab=33.05 E-value=15 Score=31.27 Aligned_cols=24 Identities=21% Similarity=0.483 Sum_probs=20.3
Q ss_pred CCCH--HHHH-HHHHHHHHH-HhcCCcc
Q 016758 9 NASQ--DDLK-KFKELAQAY-EVLSDPE 32 (383)
Q Consensus 9 ~As~--~EIK-kFkeI~~AY-evLsD~~ 32 (383)
...+ ++|| -|+++.+|| .+++||=
T Consensus 102 ~~~D~~~~Ik~~F~~vh~~Yvk~l~NPF 129 (162)
T 3pr6_A 102 GADDEFEAINQIFETVRKIYIRVKCNPL 129 (162)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3556 7999 999999999 6999993
No 64
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=31.98 E-value=68 Score=26.64 Aligned_cols=40 Identities=15% Similarity=0.206 Sum_probs=31.4
Q ss_pred HhCCCEEEEEccCCCEEEEEcCCCCcccCCcEEEEcCCCCC
Q 016758 249 ALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMP 289 (383)
Q Consensus 249 Al~G~~~~i~tldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp 289 (383)
.|-|+++. ...||+.+..+.|++.+++||..++|-.+|.-
T Consensus 51 ~LgGW~L~-r~v~g~~~~y~FP~~~~L~pg~~VtVwa~g~g 90 (144)
T 3jt0_A 51 PMGGWEMI-RKIGDTSVSYKYTSRYVLKAGQTVTIWAANAG 90 (144)
T ss_dssp ECTTCEEE-EEETTEEEEEECCTTCEECTTCEEEEEETTSC
T ss_pred ecCCcEEE-EEeCCCceEEEcCCCcEECCCCEEEEEECCCC
Confidence 45677766 34677766789999999999999999877753
No 65
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=27.46 E-value=1.1e+02 Score=24.51 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=30.7
Q ss_pred HhCCCEEEEEccCCC-EEEEEcCCCCcccCCcEEEEcCCCCC
Q 016758 249 ALCGFQFVITHLDGR-QLLIKSQPGEVVKPDQFKAINDEGMP 289 (383)
Q Consensus 249 Al~G~~~~i~tldG~-~l~i~ip~g~vi~~g~~~~i~g~Gmp 289 (383)
.|-|+++.=. .||+ .+..+.|++-+++||..++|-..|.-
T Consensus 32 ~L~gW~l~r~-v~~~~~~~y~Fp~~~~L~pg~~vtIws~~~g 72 (121)
T 1ifr_A 32 SMGNWQIKRQ-NGDDPLLTYRFPPKFTLKAGQVVTIWAAGAG 72 (121)
T ss_dssp ECTTCEEEEE-ETTSCCEEEECCSSCEECTTCEEEEEETTSS
T ss_pred ccCCCEEEEE-cCCCccEEEEeCCCcEECCCCEEEEEeCCCC
Confidence 5667776533 4654 37788999999999999999988754
No 66
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=27.14 E-value=8.3 Score=40.36 Aligned_cols=29 Identities=14% Similarity=0.336 Sum_probs=20.4
Q ss_pred eeCCCCcccceEEEEEecCCcceeeeeccCCCCcce
Q 016758 128 MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 163 (383)
Q Consensus 128 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~ 163 (383)
.+|..|+|+|-. +|--.....+|+.|+|+
T Consensus 192 ~~C~tCHGsGA~-------~Gt~~~~~~tC~tCHGs 220 (669)
T 3pmq_A 192 DTCNSCHSNLAF-------HGGRYNQVETCVTCHNS 220 (669)
T ss_dssp HHHHHHHSSCCT-------TTTTSCSSSCSTTTSST
T ss_pred CcCCCCCCCCCc-------CCccCcCCccCCCCCCC
Confidence 579999999962 22211135689999999
No 67
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=25.73 E-value=22 Score=38.23 Aligned_cols=33 Identities=33% Similarity=0.707 Sum_probs=19.2
Q ss_pred eCCCCcccceEEEEEecCCcceeeeeccCCCCcceeE
Q 016758 129 KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE 165 (383)
Q Consensus 129 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~ 165 (383)
.|+.|.|.|.+....+.-| ....+|+.|+|+.+
T Consensus 640 ~c~~c~g~G~~~~~~~f~~----~v~~~c~~c~G~r~ 672 (842)
T 2vf7_A 640 RCEHCQGEGWVMVELLFLP----SVYAPCPVCHGTRY 672 (842)
T ss_dssp BCTTTTTCSEEEETTCSSS----CEEEECTTTTTCCB
T ss_pred ccccccCCCccchhhhcCC----ccceecccccCccc
Confidence 3888888887643332222 23456777766654
No 68
>1sif_A Ubiquitin; hydrophobic mutants, folding, stability, structural protein; 2.18A {Homo sapiens} SCOP: d.15.1.1
Probab=24.16 E-value=63 Score=23.78 Aligned_cols=25 Identities=28% Similarity=0.631 Sum_probs=17.4
Q ss_pred HhCCCEEEEEccCCCEEEEEcCCCC
Q 016758 249 ALCGFQFVITHLDGRQLLIKSQPGE 273 (383)
Q Consensus 249 Al~G~~~~i~tldG~~l~i~ip~g~ 273 (383)
.|.|.++.|.+++|+.+.+.+++..
T Consensus 6 ~~~~~~i~v~~~~G~~~~l~v~~~~ 30 (88)
T 1sif_A 6 HLQGLQLFIKTLTGKTFTVEMEPSD 30 (88)
T ss_dssp ----CEEEEEETTSCEEEEECCTTS
T ss_pred cccceEEEEEeCCCCEEEEEECCCC
Confidence 4678889999999988888877654
No 69
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=23.85 E-value=78 Score=24.45 Aligned_cols=21 Identities=24% Similarity=0.550 Sum_probs=17.5
Q ss_pred EEEEEEeCCCCCCHHHHHHHH
Q 016758 301 YIHFTVDFPESLSPDQCKMLE 321 (383)
Q Consensus 301 ~i~f~V~~P~~l~~~~~~~l~ 321 (383)
.|++.|++|..+++++...|+
T Consensus 4 lV~m~V~~P~~~~~~~~~~~~ 24 (96)
T 1mli_A 4 HVKMTVKLPVDMDPAKATQLK 24 (96)
T ss_pred EEEEEeeCCCCCCHHHHHHHH
Confidence 589999999999998866554
No 70
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=23.68 E-value=1.2e+02 Score=24.23 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=30.5
Q ss_pred HhCCCEEEEEccCCCEEEEEcCCCCcccCCcEEEEcCCCCC
Q 016758 249 ALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMP 289 (383)
Q Consensus 249 Al~G~~~~i~tldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp 289 (383)
.|-|+++.= ..||.....+.|++-+++||..++|-.+|.-
T Consensus 38 ~L~gW~l~r-~v~~~~~~y~Fp~~~~L~pg~~vtVwa~g~g 77 (123)
T 3hn9_A 38 PMGGWEMIR-KIGDTSVSYKYTSRYVLKAGQTVTIWAANAG 77 (123)
T ss_dssp ECTTCEEEE-EETTEEEEEECCTTCEECTTCEEEEEETTSS
T ss_pred ecCCcEEEE-EeCCCceEEEcCCCcEECCCCEEEEEECCCC
Confidence 556777663 3577655689999999999999999887763
No 71
>3vdz_A Ubiquitin-40S ribosomal protein S27A; gadolinium, MRI contrast agent, peptide-based contrast agent lanthanide binding TAG; 2.40A {Synthetic construct} PDB: 2ojr_A
Probab=23.47 E-value=59 Score=25.27 Aligned_cols=40 Identities=20% Similarity=0.548 Sum_probs=26.3
Q ss_pred ccccccccccCC---HHHHhCCCEEEEEccCCCEEEEEcCCCC
Q 016758 234 KGDDLFVEHTLS---LTEALCGFQFVITHLDGRQLLIKSQPGE 273 (383)
Q Consensus 234 ~g~dL~~~~~I~---l~eAl~G~~~~i~tldG~~l~i~ip~g~ 273 (383)
++.++++....+ ..+.....++.|++++|+.+.|.+++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~m~I~Vk~~~G~~~~l~v~~~~ 56 (111)
T 3vdz_A 14 DGDELYIDTDNDGSIDGDELLAMQIFVKTLTGKTITLEVEPSD 56 (111)
T ss_dssp CGGGEEECTTCSSCCCTGGGGCEEEEEECSSSCEEEEEECTTC
T ss_pred CCceeccccccccccCcCCCccEEEEEEeCCCCEEEEEeCCCC
Confidence 456677665554 3344455678888888888777777653
No 72
>1cf7_A Protein (transcription factor E2F-4); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=22.31 E-value=32 Score=25.40 Aligned_cols=20 Identities=40% Similarity=0.483 Sum_probs=16.1
Q ss_pred HHHHHHhcCCccccchhccc
Q 016758 21 LAQAYEVLSDPEKREIYDQY 40 (383)
Q Consensus 21 I~~AYevLsD~~kR~~YD~~ 40 (383)
|++|-+.|.=.++|++||-.
T Consensus 33 l~~aa~~L~v~~kRRiYDI~ 52 (76)
T 1cf7_A 33 LKLAADTLAVRQKRRIYDIT 52 (76)
T ss_dssp HHHHHHHTTTCCTHHHHHHH
T ss_pred HHHHHHHhCCccceehhhHH
Confidence 67888888765799999964
No 73
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=21.49 E-value=1.7e+02 Score=24.36 Aligned_cols=51 Identities=16% Similarity=0.139 Sum_probs=34.6
Q ss_pred HhCCCEEEEEccCCC-EEEEEcCCCCcccCCcEEEEcCCCCCCCCCCCCCCceEE
Q 016758 249 ALCGFQFVITHLDGR-QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI 302 (383)
Q Consensus 249 Al~G~~~~i~tldG~-~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i 302 (383)
.|-|+++.=. .||. .+..+.|++-+++||..++|-..+.-....| -.||+-
T Consensus 63 ~L~GW~L~r~-vdg~~~~~y~Fp~~~~L~pg~tVtIws~~~g~~~~p--p~dlv~ 114 (151)
T 1ufg_A 63 SMGNWQIRRQ-NGDDPLMTYRFPPKFTLKAGQVVTIWASGAGATHSP--PTDLVW 114 (151)
T ss_dssp ECSSCEEEEE-ETTSCCEEEECCTTCEECTTCEEEEEESSSSCCCCT--TTEEEE
T ss_pred ccCCCEEEEe-cCCCccEEEEECCCcEECCCCEEEEEeCCCCCCCCC--chhEEE
Confidence 5567776533 4654 3778899999999999999998875322222 355554
No 74
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=21.34 E-value=39 Score=36.90 Aligned_cols=33 Identities=27% Similarity=0.699 Sum_probs=20.0
Q ss_pred eCCCCcccceEEEEEecCCcceeeeeccCCCCcceeE
Q 016758 129 KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE 165 (383)
Q Consensus 129 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~ 165 (383)
.|+.|.|.|.+....+.- .....+|..|.|+.+
T Consensus 755 rC~~C~g~G~i~~em~fl----~~v~~~ce~c~G~r~ 787 (972)
T 2r6f_A 755 RCEACHGDGIIKIEMHFL----PDVYVPCEVCHGKRY 787 (972)
T ss_dssp BCTTTTTCSEEEECCSSS----CCEEEECTTTTTCCB
T ss_pred cccccccccceeeehhcc----ccccccccccccccc
Confidence 488888888865433222 223456777777643
No 75
>1gmu_A UREE; metallochaperone; 1.5A {Klebsiella aerogenes} SCOP: b.107.1.1 d.58.38.1 PDB: 1gmw_A 1gmw_D 1gmv_A
Probab=21.09 E-value=1.6e+02 Score=24.21 Aligned_cols=44 Identities=16% Similarity=0.136 Sum_probs=35.3
Q ss_pred ccccCCHHHHhCCCEEEEEccCCCEEEEEcCCCCcccCCcEEEEc
Q 016758 240 VEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIN 284 (383)
Q Consensus 240 ~~~~I~l~eAl~G~~~~i~tldG~~l~i~ip~g~vi~~g~~~~i~ 284 (383)
-++.++..+. .=....+.|-+|+.+-|.+|.+..+++|+++...
T Consensus 16 ~~v~L~~~~r-~k~R~r~~t~~G~e~~l~L~r~~~L~dGDvL~~d 59 (143)
T 1gmu_A 16 ASVTLPIDVR-VKSRVKVTLNDGRDAGLLLPRGLLLRGGDVLSNE 59 (143)
T ss_dssp EEEEECHHHH-TCSEEEEECTTSCEEEEECCSSCCCCTTCEEECT
T ss_pred eEEEeCHHHH-hcceEEEECCCCCEEEEECCCCcccCCCCEEEEC
Confidence 3456776666 3346788999999999999999999999999765
No 76
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=20.61 E-value=51 Score=26.10 Aligned_cols=28 Identities=14% Similarity=0.471 Sum_probs=15.5
Q ss_pred eeeCCCCCCCCcccCcee-eCCCCcccce
Q 016758 111 NVICTKCKGKGSKSGASM-KCSGCQGSGM 138 (383)
Q Consensus 111 ~~~C~~C~G~G~~~~~~~-~C~~C~G~G~ 138 (383)
...|..|.-.-....... .||.|++.-.
T Consensus 73 ~~~C~~CG~~~e~~~~~~~~CP~Cgs~~~ 101 (119)
T 2kdx_A 73 ELECKDCSHVFKPNALDYGVCEKCHSKNV 101 (119)
T ss_dssp EEECSSSSCEECSCCSTTCCCSSSSSCCC
T ss_pred eEEcCCCCCEEeCCCCCCCcCccccCCCc
Confidence 456777754433223335 6777766644
Done!