Query 016761
Match_columns 383
No_of_seqs 167 out of 333
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 02:34:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016761.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016761hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03407 Nucleotid_trans: Nucl 100.0 6.5E-42 1.4E-46 317.1 19.2 200 139-338 1-212 (212)
2 cd02537 GT8_Glycogenin Glycoge 98.2 4.6E-05 9.9E-10 72.6 14.0 189 113-326 8-206 (240)
3 cd04194 GT8_A4GalT_like A4GalT 97.9 0.00014 3.1E-09 68.9 11.2 202 109-326 3-240 (248)
4 PF05637 Glyco_transf_34: gala 97.7 4.6E-05 9.9E-10 73.0 5.1 164 154-328 34-232 (239)
5 cd00505 Glyco_transf_8 Members 97.7 0.0012 2.7E-08 62.7 14.2 135 186-327 80-239 (246)
6 PLN00176 galactinol synthase 97.6 0.003 6.6E-08 63.5 16.7 223 105-349 21-292 (333)
7 PLN03181 glycosyltransferase; 97.6 0.009 1.9E-07 61.3 19.8 141 155-310 159-327 (453)
8 cd06914 GT8_GNT1 GNT1 is a fun 97.0 0.0031 6.7E-08 61.9 9.1 115 181-308 73-190 (278)
9 cd06430 GT8_like_2 GT8_like_2 97.0 0.009 1.9E-07 59.4 11.9 149 195-349 89-276 (304)
10 PLN03182 xyloglucan 6-xylosylt 96.9 0.0077 1.7E-07 61.7 11.3 160 155-328 158-359 (429)
11 PF01501 Glyco_transf_8: Glyco 96.8 0.0015 3.3E-08 60.5 4.5 205 109-327 2-241 (250)
12 cd06431 GT8_LARGE_C LARGE cata 96.6 0.0081 1.8E-07 58.9 8.3 153 195-355 89-274 (280)
13 PRK15171 lipopolysaccharide 1, 95.0 0.32 6.8E-06 48.9 12.2 204 107-326 26-264 (334)
14 COG1442 RfaJ Lipopolysaccharid 93.5 0.72 1.6E-05 46.4 10.9 173 109-289 5-201 (325)
15 cd06429 GT8_like_1 GT8_like_1 91.9 0.53 1.1E-05 45.7 7.3 102 205-326 116-234 (257)
16 cd06432 GT8_HUGT1_C_like The C 90.6 0.75 1.6E-05 44.3 6.9 126 194-328 86-240 (248)
17 PF03314 DUF273: Protein of un 88.8 2.3 5E-05 40.3 8.3 94 186-287 25-125 (222)
18 PLN02829 Probable galacturonos 84.7 4 8.7E-05 44.4 8.5 161 178-353 432-629 (639)
19 PLN02718 Probable galacturonos 84.7 3.5 7.5E-05 44.7 8.0 152 187-352 403-592 (603)
20 PLN02867 Probable galacturonos 84.5 4 8.6E-05 43.7 8.3 158 180-350 322-522 (535)
21 PLN02659 Probable galacturonos 83.4 5.2 0.00011 42.8 8.6 157 180-353 321-523 (534)
22 PLN02870 Probable galacturonos 79.6 4 8.6E-05 43.6 6.1 150 190-353 331-522 (533)
23 PLN02523 galacturonosyltransfe 77.4 2.2 4.9E-05 45.6 3.5 144 196-353 370-549 (559)
24 PLN02910 polygalacturonate 4-a 75.4 8.1 0.00018 42.1 7.0 158 178-350 450-644 (657)
25 PLN02742 Probable galacturonos 68.4 15 0.00031 39.5 7.0 158 187-352 338-524 (534)
26 KOG4748 Subunit of Golgi manno 60.2 14 0.00031 37.8 4.9 180 155-353 133-351 (364)
27 PLN02769 Probable galacturonos 52.6 47 0.001 36.4 7.5 146 191-350 441-617 (629)
28 PF11051 Mannosyl_trans3: Mann 46.5 9.8 0.00021 37.0 1.2 32 205-254 93-124 (271)
29 PF08114 PMP1_2: ATPase proteo 42.8 33 0.00072 24.3 3.0 26 32-57 8-33 (43)
30 COG1512 Beta-propeller domains 35.3 2E+02 0.0044 28.4 8.4 64 79-151 36-109 (271)
31 PF02484 Rhabdo_NV: Rhabdoviru 29.3 65 0.0014 26.7 3.2 28 191-218 13-40 (111)
32 KOG3916 UDP-Gal:glucosylcerami 29.3 46 0.00099 34.0 2.8 38 179-216 191-229 (372)
33 PF05726 Pirin_C: Pirin C-term 28.6 40 0.00086 27.8 2.0 31 314-347 70-100 (104)
34 PRK05647 purN phosphoribosylgl 23.7 4.9E+02 0.011 24.2 8.5 55 106-169 3-59 (200)
35 PF00535 Glycos_transf_2: Glyc 20.6 4.6E+02 0.01 21.2 7.8 94 107-223 1-99 (169)
36 PLN02331 phosphoribosylglycina 20.3 5.5E+02 0.012 24.1 8.1 54 107-169 2-57 (207)
37 COG2312 Erythromycin esterase 20.2 83 0.0018 32.8 2.8 89 178-283 53-142 (405)
No 1
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=100.00 E-value=6.5e-42 Score=317.06 Aligned_cols=200 Identities=30% Similarity=0.572 Sum_probs=172.3
Q ss_pred cccccEEEEEecHHHHHHHHhcCccEEEeecCC-cCcccccccccHHHHHHHHHHHHHHHHHHHcCceEEEecceEEecc
Q 016761 139 KLLNHLVIIALDQKAFERCLTLHRHCFALITDG-VDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFR 217 (383)
Q Consensus 139 ~ll~hllVvAlD~~a~~~c~~~g~~c~~~~~~~-~d~s~~~~~gS~~f~~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlR 217 (383)
++++|+||+|+|+++++.|++++++|+...... ........|+++.|++++|.|+.+++++|++||+|+|+|+||||+|
T Consensus 1 ~~~~~~lv~a~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~ 80 (212)
T PF03407_consen 1 HLIDNFLVVALDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLR 80 (212)
T ss_pred CccccEEEEEECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEec
Confidence 357899999999999999999999998877641 1222357899999999999999999999999999999999999999
Q ss_pred CCccCc-CCCCCeeEeccCCCCCC-CCCCCCCceEEEEEeeChHHHHHHHHHHHHHhcCCCCCChHHHHHHHcCCCCCCC
Q 016761 218 DPFPRF-YPDADFQVACDHFLGSP-DDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDI 295 (383)
Q Consensus 218 NP~p~f-~~~aDi~issD~~~g~~-~~~~~~~NtGf~yvRst~~ti~f~~~W~~~~~~~p~~~DQ~vfN~l~~~~~~~~~ 295 (383)
||+++| ++++|+++++|...+.+ ...+..+|+||+|+|+|++|++|++.|.+.+...++.+||.+||.++++......
T Consensus 81 dp~~~~~~~~~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~~~~~~~~ 160 (212)
T PF03407_consen 81 DPLPYFENPDADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAESPGCWDQQAFNELLREQAARYG 160 (212)
T ss_pred CcHHhhccCCCceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHhcccCCc
Confidence 999999 89999999999887643 3345677999999999999999999999988888888999999999965443348
Q ss_pred CcEEEEccccccC----Cccc-cCC-C---CCceEEEeccccCCcccHHHHH
Q 016761 296 GLKIKFLDTAYFG----GLCE-PSE-D---FNVVCTMHANCCYGLNSKLIDL 338 (383)
Q Consensus 296 gl~v~~L~~~~F~----gf~q-~~~-d---~~~p~~vHaN~~~G~~~K~~rL 338 (383)
++++++||...|+ .|++ ... . ..+||+||+|||.|.++|++||
T Consensus 161 ~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n~~~g~~~K~~~~ 212 (212)
T PF03407_consen 161 GLRVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHANCCDGKEGKRQRF 212 (212)
T ss_pred CcEEEEeCHHHeeccccceeecchhhhhccccccceEEEcCCCChHhHHhhC
Confidence 9999999999996 3677 111 1 2589999999999999999986
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=98.15 E-value=4.6e-05 Score=72.60 Aligned_cols=189 Identities=17% Similarity=0.091 Sum_probs=107.6
Q ss_pred cCccccCCChhHHHHHHhhhhccCcccccccEEEEE---ecHHHHHHHHhcCccEEEeecCCcCcccccccccHHHHHHH
Q 016761 113 LNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIA---LDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMM 189 (383)
Q Consensus 113 ~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvA---lD~~a~~~c~~~g~~c~~~~~~~~d~s~~~~~gS~~f~~m~ 189 (383)
+|.+|+.+ +-..+.|++.... . .+++|+. +.++..+.+++.+..+..+.. .+...........+...+
T Consensus 8 ~~~~Y~~~---a~vl~~SL~~~~~--~--~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~--i~~~~~~~~~~~~~~~~~ 78 (240)
T cd02537 8 TNDDYLPG---ALVLGYSLRKVGS--S--YDLVVLVTPGVSEESREALEEVGWIVREVEP--IDPPDSANLLKRPRFKDT 78 (240)
T ss_pred cChhHHHH---HHHHHHHHHhcCC--C--CCEEEEECCCCCHHHHHHHHHcCCEEEecCc--cCCcchhhhccchHHHHH
Confidence 45567542 1123556665321 1 2444444 346667788888866554432 222111112234567788
Q ss_pred HHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCCCCeeEeccCCCCCCCCCCCCCceEEEEEeeChHHHHHHHHHH
Q 016761 190 WKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWY 268 (383)
Q Consensus 190 w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~aDi~issD~~~g~~~~~~~~~NtGf~yvRst~~ti~f~~~W~ 268 (383)
|.|+.+... ..| .||+.|+|++-++|+-+.|..+..+....|.. .....|+||+.++++....+-+.+..
T Consensus 79 ~~kl~~~~l---~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~------~~~~fNsGv~l~~~~~~~~~~~~~~~ 149 (240)
T cd02537 79 YTKLRLWNL---TEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCG------WPDLFNSGVFVLKPSEETFNDLLDAL 149 (240)
T ss_pred hHHHHhccc---cccceEEEEeCCeeEccCHHHHhCCCCceeeecccC------ccccccceEEEEcCCHHHHHHHHHHH
Confidence 889776652 256 59999999999999988886522233333321 13578999999999875544443333
Q ss_pred HHHhcCCCCCChHHHHHHHcCCCCCCCCcEEEEccccc-cC-Ccccc----CCCCCceEEEecc
Q 016761 269 ASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-FG-GLCEP----SEDFNVVCTMHAN 326 (383)
Q Consensus 269 ~~~~~~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F~-gf~q~----~~d~~~p~~vHaN 326 (383)
..... ....||+++|.+.+.. | .+..||..+ +. +.... ......|.++|-+
T Consensus 150 ~~~~~-~~~~DQdiLN~~~~~~-----~-~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~ 206 (240)
T cd02537 150 QDTPS-FDGGDQGLLNSYFSDR-----G-IWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFI 206 (240)
T ss_pred hccCC-CCCCCHHHHHHHHcCC-----C-CEeECCcceeeehhhhccCchhhcccCCcEEEEEe
Confidence 22112 2458999999998431 1 566676553 21 11111 1123568999964
No 3
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=97.85 E-value=0.00014 Score=68.87 Aligned_cols=202 Identities=21% Similarity=0.248 Sum_probs=110.5
Q ss_pred EEEEcCccccCCChhHHHHHHhhhhccCcccccccEEEEEec--HHHHHHHHhc----CccEEEeecCCcCccccccccc
Q 016761 109 ILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALD--QKAFERCLTL----HRHCFALITDGVDFHQEAYFMT 182 (383)
Q Consensus 109 IlT~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvAlD--~~a~~~c~~~----g~~c~~~~~~~~d~s~~~~~gS 182 (383)
|+.++|..|..+ +-.-+.|+........ -++.|++.| ++..+.+++. +..+-.......++... ...+
T Consensus 3 I~~~~d~~y~~~---~~~~l~Sl~~~~~~~~--~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~~~~~-~~~~ 76 (248)
T cd04194 3 IVFAIDDNYAPY---LAVTIKSILANNSKRD--YDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFKFF-PATT 76 (248)
T ss_pred EEEEecHhhHHH---HHHHHHHHHhcCCCCc--eEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHHHhcC-Cccc
Confidence 678889888543 2223556654222111 245666644 6667777665 22222222211112110 0123
Q ss_pred HHHHHHHHHHHHHHHHHHHcCce-EEEecceEEeccCCccCcCCC---CCeeEeccCCCC---------CCCCCCCCCce
Q 016761 183 PQYLKMMWKRIDFLRTVLEMGYN-FIFTDADIMWFRDPFPRFYPD---ADFQVACDHFLG---------SPDDVQNRPNG 249 (383)
Q Consensus 183 ~~f~~m~w~K~~~l~~vL~lGy~-VLfsDvDVVWlRNP~p~f~~~---aDi~issD~~~g---------~~~~~~~~~Nt 249 (383)
+.|..++..|+.+ -+++. .|+ ||+.|+|++-++|+-+.+..+ .-+....|.... .........|+
T Consensus 77 ~~~~~~~y~rl~l-~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNs 154 (248)
T cd04194 77 DHISYATYYRLLI-PDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFNS 154 (248)
T ss_pred ccccHHHHHHHHH-HHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceeee
Confidence 4455666666654 44555 675 999999999999998887542 333444554421 00122357899
Q ss_pred EEEEEeeCh-HHHHHHHHHHHHHhcCC---CCCChHHHHHHHcCCCCCCCCcEEEEccccc-c-CCccccC---------
Q 016761 250 GFNHVKSNN-RSIEFYRFWYASRETYP---GYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-F-GGLCEPS--------- 314 (383)
Q Consensus 250 Gf~yvRst~-~ti~f~~~W~~~~~~~p---~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F-~gf~q~~--------- 314 (383)
|++.+..+. +...+.+.+.+.....+ ...||+++|.+..+ +++.||..+ + .+.+...
T Consensus 155 Gv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~--------~~~~L~~~~N~~~~~~~~~~~~~~~~~~ 226 (248)
T cd04194 155 GVLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKD--------KILYLPPRYNFQTGFYYLLKKKSKEEQE 226 (248)
T ss_pred cchheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhC--------CeEEcCcccccchhHhHHhhccchhHHH
Confidence 999997653 22233444433333332 35899999999843 167777554 2 2222111
Q ss_pred --CCCCceEEEecc
Q 016761 315 --EDFNVVCTMHAN 326 (383)
Q Consensus 315 --~d~~~p~~vHaN 326 (383)
.....|.++|-+
T Consensus 227 ~~~~~~~~~iiHf~ 240 (248)
T cd04194 227 LEEARKNPVIIHYT 240 (248)
T ss_pred HHHHhcCCEEEEeC
Confidence 123578999975
No 4
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=97.69 E-value=4.6e-05 Score=73.00 Aligned_cols=164 Identities=16% Similarity=0.179 Sum_probs=33.1
Q ss_pred HHHHHhcCccEEEeecCCcCcccccccccHHHHHHHHHHHHHHHHHHHcCc--e-EEEecceEEeccCCcc---CcC-C-
Q 016761 154 FERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGY--N-FIFTDADIMWFRDPFP---RFY-P- 225 (383)
Q Consensus 154 ~~~c~~~g~~c~~~~~~~~d~s~~~~~gS~~f~~m~w~K~~~l~~vL~lGy--~-VLfsDvDVVWlRNP~p---~f~-~- 225 (383)
.++|+..|-.+|...... + -. .-....|.|+.+|++.+..=- + |++.|.|++...-=++ ++. +
T Consensus 34 ~~Ya~~HgY~~~~~~~~~--~------~~-~~~~~~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p~ 104 (239)
T PF05637_consen 34 VDYARRHGYDLYYRNIQE--Y------DD-PERPGSWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSPS 104 (239)
T ss_dssp HHHHHHHT-EEEEE-S----S---------SHHHHHHTHHHHHHHHHHH-TT-SEEEEE-TTEEE---------------
T ss_pred HHHHHhcCCEEEEEChHH--c------CC-CCCChhhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEeccccccccccccc
Confidence 468999998777643311 1 11 223445999999999997532 2 8999999976542233 111 0
Q ss_pred CCCee-------EeccCCC-------CCC-----CCCCCCCceEEEEEeeChHHHHHHHHHHHHHhcCC-----CCCChH
Q 016761 226 DADFQ-------VACDHFL-------GSP-----DDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYP-----GYHDQD 281 (383)
Q Consensus 226 ~aDi~-------issD~~~-------g~~-----~~~~~~~NtGf~yvRst~~ti~f~~~W~~~~~~~p-----~~~DQ~ 281 (383)
.-|-. +.-+... +++ ..-.+.+|+|++++|.++-|+.|++.|..-+.... ...||.
T Consensus 105 ~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~t~d~~gLNtGsFliRns~ws~~fLd~w~~~~~~~~~~~~~~~~EQs 184 (239)
T PF05637_consen 105 RLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLIITQDWNGLNTGSFLIRNSPWSRDFLDAWADPLYRNYDWDQLEFDEQS 184 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00000 0101110 110 11146789999999999999999999976544322 246999
Q ss_pred HHHHHHcCCCCCCCCcEEEEccccccCCccccC---CCCCceEEEecccc
Q 016761 282 VLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPS---EDFNVVCTMHANCC 328 (383)
Q Consensus 282 vfN~l~~~~~~~~~gl~v~~L~~~~F~gf~q~~---~d~~~p~~vHaN~~ 328 (383)
+|..++... ....-++.++|...|..+-... .......++|..=|
T Consensus 185 Al~~ll~~~--~~~~~~~~~vpq~~~nsy~~~~~~~~~~~GDfvvhfaGC 232 (239)
T PF05637_consen 185 ALEHLLQWH--PEILSKVALVPQRWFNSYPEDECNYQYKEGDFVVHFAGC 232 (239)
T ss_dssp --------------------------------------------------
T ss_pred ccccccccc--ccccccccccccccccccccccccccccccccccccccc
Confidence 999888431 2233456678887776543321 22345678887666
No 5
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=97.65 E-value=0.0012 Score=62.73 Aligned_cols=135 Identities=17% Similarity=0.124 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHcCce-EEEecceEEeccCCccCcCCC---CCeeEeccCCCC---C-------CCCCCCCCceEE
Q 016761 186 LKMMWKRIDFLRTVLEMGYN-FIFTDADIMWFRDPFPRFYPD---ADFQVACDHFLG---S-------PDDVQNRPNGGF 251 (383)
Q Consensus 186 ~~m~w~K~~~l~~vL~lGy~-VLfsDvDVVWlRNP~p~f~~~---aDi~issD~~~g---~-------~~~~~~~~NtGf 251 (383)
...++.|+. +-++|. .|+ ||+.|+|++-++|.-+.+.-+ .-+.+..|+... . ........|+|+
T Consensus 80 ~~~~y~RL~-i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yfNsGV 157 (246)
T cd00505 80 KIVTLTKLH-LPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGV 157 (246)
T ss_pred ccceeHHHH-HHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCceeeee
Confidence 344555554 455677 784 999999999999998887532 333344444310 0 011235789999
Q ss_pred EEEeeChHH-HHHHHHHHHHHhc---CCCCCChHHHHHHHcCCCCCCCCcEEEEcccccc-C-CccccC-----CCCCce
Q 016761 252 NHVKSNNRS-IEFYRFWYASRET---YPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYF-G-GLCEPS-----EDFNVV 320 (383)
Q Consensus 252 ~yvRst~~t-i~f~~~W~~~~~~---~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~F-~-gf~q~~-----~d~~~p 320 (383)
+.+..+.-. ..+.+...+.... .....||+++|.++.+ .+.++..||..+= . +.+... ....+|
T Consensus 158 mlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~-----~~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~ 232 (246)
T cd00505 158 FVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQ-----VPFIVKSLPCIWNVRLTGCYRSLNCFKAFVKNA 232 (246)
T ss_pred EEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhc-----CCCeEEECCCeeeEEecCccccccchhhhcCCC
Confidence 999998763 4444443332222 2356899999999843 3366777876542 1 222221 134689
Q ss_pred EEEeccc
Q 016761 321 CTMHANC 327 (383)
Q Consensus 321 ~~vHaN~ 327 (383)
.++|-+.
T Consensus 233 ~iiHy~g 239 (246)
T cd00505 233 KVIHFNG 239 (246)
T ss_pred EEEEeCC
Confidence 9999753
No 6
>PLN00176 galactinol synthase
Probab=97.60 E-value=0.003 Score=63.47 Aligned_cols=223 Identities=17% Similarity=0.212 Sum_probs=121.6
Q ss_pred CCeEEEE--EcCccccCCChhHHHHHHhhhhccCcccccccEEEEEecH---HHHHHHHhcCccEEEeecCCcCcc-ccc
Q 016761 105 DRTVILT--TLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQ---KAFERCLTLHRHCFALITDGVDFH-QEA 178 (383)
Q Consensus 105 d~tVIlT--~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvAlD~---~a~~~c~~~g~~c~~~~~~~~d~s-~~~ 178 (383)
.+..-|| ++|..|.. | .+ ....|+|.. ++. ..++|+..++ +..+.+++.|......+. .... ...
T Consensus 21 ~~~AyVT~L~~n~~Y~~-G-a~-vL~~SLr~~-~s~---~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~--i~~~~~~~ 91 (333)
T PLN00176 21 AKRAYVTFLAGNGDYVK-G-VV-GLAKGLRKV-KSA---YPLVVAVLPDVPEEHRRILVSQGCIVREIEP--VYPPENQT 91 (333)
T ss_pred CceEEEEEEecCcchHH-H-HH-HHHHHHHHh-CCC---CCEEEEECCCCCHHHHHHHHHcCCEEEEecc--cCCccccc
Confidence 4566677 45778854 2 22 235677653 232 3455555443 556667777754433322 1111 112
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCC-CCeeEeccCCCCC-----------------
Q 016761 179 YFMTPQYLKMMWKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPD-ADFQVACDHFLGS----------------- 239 (383)
Q Consensus 179 ~~gS~~f~~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~-aDi~issD~~~g~----------------- 239 (383)
.|. ..+..+.+.|.++... . .| .||+.|+|++-++|--+.|.-. .-+....|++...
T Consensus 92 ~~~-~~~~~i~~tKl~iw~l-~--~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~ 167 (333)
T PLN00176 92 QFA-MAYYVINYSKLRIWEF-V--EYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCP 167 (333)
T ss_pred ccc-cchhhhhhhhhhhccc-c--ccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccch
Confidence 333 2355667778885543 2 47 5999999999999998777532 2243444543210
Q ss_pred -----CCC----CCCCCceEEEEEeeChHHHHHHHHHHHHHhcCCCCCChHHHHHHHcCCCCCCCCcEEEEccccc-cC-
Q 016761 240 -----PDD----VQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-FG- 308 (383)
Q Consensus 240 -----~~~----~~~~~NtGf~yvRst~~ti~f~~~W~~~~~~~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F~- 308 (383)
|.. ....+|+|++.+.++..+.+-+-++....... ...||++||.+++. ++..||..| +.
T Consensus 168 ~~~~wp~~~g~~~~~yFNSGVlvinps~~~~~~ll~~l~~~~~~-~f~DQD~LN~~F~~--------~~~~Lp~~YN~~~ 238 (333)
T PLN00176 168 DKVTWPAELGPPPPLYFNAGMFVFEPSLSTYEDLLETLKITPPT-PFAEQDFLNMFFRD--------IYKPIPPVYNLVL 238 (333)
T ss_pred hhccchhhccCCCCCeEEeEEEEEEcCHHHHHHHHHHHHhcCCC-CCCCHHHHHHHHcC--------cEEECCchhcCch
Confidence 000 12478999999999977644333332211111 35899999999943 345566443 11
Q ss_pred C-ccc-c-CCCCCceEEEeccc------c-CC--cccHHHHHHHHHHH-HHHhh
Q 016761 309 G-LCE-P-SEDFNVVCTMHANC------C-YG--LNSKLIDLRIMLQD-WKYFL 349 (383)
Q Consensus 309 g-f~q-~-~~d~~~p~~vHaN~------~-~G--~~~K~~rLR~~l~d-W~~~~ 349 (383)
. ... + ..+..++.+||-.. . .| ..-++++.+++.+. |.-|-
T Consensus 239 ~~~~~~~~~~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~ 292 (333)
T PLN00176 239 AMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYN 292 (333)
T ss_pred hhhhhChhhcccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhc
Confidence 1 111 1 11245788999732 1 11 12356777887766 55553
No 7
>PLN03181 glycosyltransferase; Provisional
Probab=97.58 E-value=0.009 Score=61.34 Aligned_cols=141 Identities=18% Similarity=0.290 Sum_probs=87.9
Q ss_pred HHHHhcCccEEEeecCCcCcccccccccHHHHHHHHHHHHHHHHHHHcCce---EEEecceEEeccCCccCc----CCCC
Q 016761 155 ERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYN---FIFTDADIMWFRDPFPRF----YPDA 227 (383)
Q Consensus 155 ~~c~~~g~~c~~~~~~~~d~s~~~~~gS~~f~~m~w~K~~~l~~vL~lGy~---VLfsDvDVVWlRNP~p~f----~~~a 227 (383)
++|+.+|..+|.... .... -....|.|+-+++..+..=-+ |.+.|.|.+.. ||-.-+ +.+.
T Consensus 159 dYArrHGY~lf~~~a---~Ld~--------~~p~~WaKipalRaAM~a~PeAEWfWWLDsDALIM-Np~~sLPl~ry~~~ 226 (453)
T PLN03181 159 DYCRIHGYDIFYNNA---LLHP--------KMNSYWAKLPVVRAAMLAHPEAEWIWWVDSDAVFT-DMDFKLPLHRYRDH 226 (453)
T ss_pred HHHHHhCCcEEEecc---ccCc--------cCchhhhHHHHHHHHHHHCCCceEEEEecCCceee-cCCCCCCHhhcCCc
Confidence 689999988876533 1111 015579999999998776322 88899998765 552222 2233
Q ss_pred CeeEeccCCCCCCC--CCCCCCceEEEEEeeChHHHHHHHHHHHHHhc-------------------CCCCCChHHHHHH
Q 016761 228 DFQVACDHFLGSPD--DVQNRPNGGFNHVKSNNRSIEFYRFWYASRET-------------------YPGYHDQDVLNII 286 (383)
Q Consensus 228 Di~issD~~~g~~~--~~~~~~NtGf~yvRst~~ti~f~~~W~~~~~~-------------------~p~~~DQ~vfN~l 286 (383)
.+++- ++....+ .--..+|+|.+++|.++-+.+|++.|..+-.+ .+...||.++-.+
T Consensus 227 NLvvh--g~p~~vy~~qdw~GlN~GsFLIRNcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyl 304 (453)
T PLN03181 227 NLVVH--GWPKLIYEKRSWTALNAGVFLIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYL 304 (453)
T ss_pred ccccc--CCcccccccccccccceeeeEEecCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHH
Confidence 33321 1100000 11366899999999999999999999874221 2356899999887
Q ss_pred HcCCCCCCCCcEEEEccccccCCc
Q 016761 287 KFDPSIMDIGLKIKFLDTAYFGGL 310 (383)
Q Consensus 287 ~~~~~~~~~gl~v~~L~~~~F~gf 310 (383)
+-. .-.+-+-++.+=...+|.|+
T Consensus 305 l~~-~~~~w~~k~ylE~~yy~~Gy 327 (453)
T PLN03181 305 LYK-HKEKWGDKIYLEGEYYFEGY 327 (453)
T ss_pred HHh-ccchhccceeeecceeeeee
Confidence 622 12334556655566667664
No 8
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=97.03 E-value=0.0031 Score=61.95 Aligned_cols=115 Identities=12% Similarity=0.033 Sum_probs=72.7
Q ss_pred ccHHHHHHHHHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCC-CCeeEeccCCCCCCCCCCCCCceEEEEEeeCh
Q 016761 181 MTPQYLKMMWKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPD-ADFQVACDHFLGSPDDVQNRPNGGFNHVKSNN 258 (383)
Q Consensus 181 gS~~f~~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~-aDi~issD~~~g~~~~~~~~~NtGf~yvRst~ 258 (383)
+++.|.. ++.|+.+... ..| .||+.|+|++-++|.-+.|.-+ ..-+.+-+ ....+|+|+|.+.++.
T Consensus 73 ~~~~~~~-~~tKl~~~~l---~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~--------~~~~FNSGvmvi~ps~ 140 (278)
T cd06914 73 GDAYWAK-SLTKLRAFNQ---TEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPR--------AYWKFASHLMVIKPSK 140 (278)
T ss_pred CCccHHH-HHHHHHhccc---cceeeEEEecCChhhhcChHHHhcCCcccceeeec--------CcceecceeEEEeCCH
Confidence 3344544 3777776665 457 4999999999999887777433 11111211 1237899999999998
Q ss_pred HHHHHHHHHHHHHhc-CCCCCChHHHHHHHcCCCCCCCCcEEEEccccccC
Q 016761 259 RSIEFYRFWYASRET-YPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFG 308 (383)
Q Consensus 259 ~ti~f~~~W~~~~~~-~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~F~ 308 (383)
.+-.=+..-...... ..+..||+++|.++.. .......++.+||...++
T Consensus 141 ~~~~~l~~~~~~~~~~~~~~~DQdiLN~~~~~-~~~~~~~~~~~Lp~~~y~ 190 (278)
T cd06914 141 EAFKELMTEILPAYLNKKNEYDMDLINEEFYN-SKQLFKPSVLVLPHRQYG 190 (278)
T ss_pred HHHHHHHHHHHHhcccCCCCCChHHHHHHHhC-CccccCcceEEcCccccc
Confidence 774444433222222 2356899999999843 323355667788876544
No 9
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=96.97 E-value=0.009 Score=59.39 Aligned_cols=149 Identities=16% Similarity=0.221 Sum_probs=89.1
Q ss_pred HHHHHHHcCc-eEEEecceEEeccCCccCcCC--CC-C--eeEe-ccCCC------C----CCCCCCCCCceEEEEEeeC
Q 016761 195 FLRTVLEMGY-NFIFTDADIMWFRDPFPRFYP--DA-D--FQVA-CDHFL------G----SPDDVQNRPNGGFNHVKSN 257 (383)
Q Consensus 195 ~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~--~a-D--i~is-sD~~~------g----~~~~~~~~~NtGf~yvRst 257 (383)
++-++|. -+ .||+.|+||+.++|.-+.+.. +- | +... .|... . .+......+|+|++++-=+
T Consensus 89 ~ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGVmLmNL~ 167 (304)
T cd06430 89 FLPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGVMLMNLT 167 (304)
T ss_pred HHHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcccccccccceeeeeHH
Confidence 3445565 44 699999999999988776643 21 1 2221 12211 1 1111123489999998644
Q ss_pred hHH------------HHHHHHHHHHHhcCC---CCCChHHHHHHHcCCCCCCCCcEEEEccccc-c-CCccccC-----C
Q 016761 258 NRS------------IEFYRFWYASRETYP---GYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-F-GGLCEPS-----E 315 (383)
Q Consensus 258 ~~t------------i~f~~~W~~~~~~~p---~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F-~gf~q~~-----~ 315 (383)
.-- ..+-+.|.+...++. ...||++||.++.+ ..-++.+||..+ | +..|+++ +
T Consensus 168 ~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~-----~p~~~~~Lp~~wN~~~d~~~y~~~~~~~ 242 (304)
T cd06430 168 RMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHH-----NPEMLYVFPCHWNYRPDHCMYGSNCKAA 242 (304)
T ss_pred HHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcC-----CCCeEEEcCccccCCccceeeccccccc
Confidence 311 223444544444443 25899999999943 234567777543 2 2445432 3
Q ss_pred CCCceEEEeccccCCcccHHHHHHHHHHHHHHhh
Q 016761 316 DFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFL 349 (383)
Q Consensus 316 d~~~p~~vHaN~~~G~~~K~~rLR~~l~dW~~~~ 349 (383)
+...+-++|.|=..=++.|..-+|.+-+--+.|.
T Consensus 243 ~~~~~~~~H~n~~~~~~~~~~~f~~~~~~~~~~~ 276 (304)
T cd06430 243 EEEGVFILHGNRGVYHSDKQPAFRAVYEAIREYT 276 (304)
T ss_pred ccccceEEEcCCCCCCCccchHHHHHHHHHHhcc
Confidence 3457899999966556889889998765555554
No 10
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=96.94 E-value=0.0077 Score=61.68 Aligned_cols=160 Identities=15% Similarity=0.183 Sum_probs=102.7
Q ss_pred HHHHhcCccEEEeecCCcCcccccccccHHHHHHHHHHHHHHHHHHHcCce---EEEecceEEeccCCccCc---CCCCC
Q 016761 155 ERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYN---FIFTDADIMWFRDPFPRF---YPDAD 228 (383)
Q Consensus 155 ~~c~~~g~~c~~~~~~~~d~s~~~~~gS~~f~~m~w~K~~~l~~vL~lGy~---VLfsDvDVVWlRNP~p~f---~~~aD 228 (383)
++|+..|..+|. ... .+..+ ..-.|.|+-+|+.++...-+ |.+.|.|.+..--+++.= +.+.+
T Consensus 158 dYAr~HGY~~fy-n~~--~ld~~--------~p~~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNmsfelPlery~~~N 226 (429)
T PLN03182 158 DYCRLHGIEIFY-NMA--HLDAE--------MAGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFEIPLEKYEGYN 226 (429)
T ss_pred HHHHHhCCEEEe-ehh--hcCcC--------CCcchhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhHcCCcC
Confidence 688888877765 321 12110 02349999999999876433 788999998865333311 12334
Q ss_pred eeEeccCCCCCC--CCCCCCCceEEEEEeeChHHHHHHHHHHHHHhc-------------------CCCCCChHHHHHHH
Q 016761 229 FQVACDHFLGSP--DDVQNRPNGGFNHVKSNNRSIEFYRFWYASRET-------------------YPGYHDQDVLNIIK 287 (383)
Q Consensus 229 i~issD~~~g~~--~~~~~~~NtGf~yvRst~~ti~f~~~W~~~~~~-------------------~p~~~DQ~vfN~l~ 287 (383)
+++- ++...- ..-.+.+|+|.|++|.++-++.|++.|..+..+ .+...||.++-.++
T Consensus 227 lVih--g~~~~l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl 304 (429)
T PLN03182 227 LVIH--GWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLL 304 (429)
T ss_pred eeec--cchhhheeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHH
Confidence 4332 111100 011456899999999999999999999876441 12468999999988
Q ss_pred cCCCCCCCCcEEEEccccccCCcccc------------C---CCCCceEEEecccc
Q 016761 288 FDPSIMDIGLKIKFLDTAYFGGLCEP------------S---EDFNVVCTMHANCC 328 (383)
Q Consensus 288 ~~~~~~~~gl~v~~L~~~~F~gf~q~------------~---~d~~~p~~vHaN~~ 328 (383)
..+ -..-+-++.+-+..+|-||... + -|...|++.|-.-|
T Consensus 305 ~~~-~~~w~~kv~le~~y~l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~Gc 359 (429)
T PLN03182 305 LTQ-RERWGDKVYLENSYYLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVGC 359 (429)
T ss_pred Hhc-chhhccceEEeecceeccccHHHHHHHHHHHHhcCCCCCCcccceeEeeccc
Confidence 332 2345677888788888886421 1 23457999998755
No 11
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=96.78 E-value=0.0015 Score=60.47 Aligned_cols=205 Identities=17% Similarity=0.139 Sum_probs=101.6
Q ss_pred EEEEcCccccCCChhHHHHHHhhhhccCcccccccEEEEE--ecHHHHHHHHhcCccE----EEeecCCcCcc--ccccc
Q 016761 109 ILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIA--LDQKAFERCLTLHRHC----FALITDGVDFH--QEAYF 180 (383)
Q Consensus 109 IlT~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvA--lD~~a~~~c~~~g~~c----~~~~~~~~d~s--~~~~~ 180 (383)
|+.++|..|..+ +-.-+.|++...... .--++.|+. ..++..+..++.+... ........... .....
T Consensus 2 i~~~~d~~y~~~---~~v~i~Sl~~~~~~~-~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (250)
T PF01501_consen 2 IVLACDDNYLEG---AAVLIKSLLKNNPDP-SNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSP 77 (250)
T ss_dssp EEEECSGGGHHH---HHHHHHHHHHTTTT--SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-H
T ss_pred EEEEeCHHHHHH---HHHHHHHHHHhcccc-ccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhccc
Confidence 677888888542 112355665422211 112233443 3445555665554321 11111110000 01112
Q ss_pred ccHHHHHHHHHHHHHHHHHHHcCce-EEEecceEEeccCCccCcCC--CCC-eeEeccC-----CCC-------CCCCCC
Q 016761 181 MTPQYLKMMWKRIDFLRTVLEMGYN-FIFTDADIMWFRDPFPRFYP--DAD-FQVACDH-----FLG-------SPDDVQ 244 (383)
Q Consensus 181 gS~~f~~m~w~K~~~l~~vL~lGy~-VLfsDvDVVWlRNP~p~f~~--~aD-i~issD~-----~~g-------~~~~~~ 244 (383)
....+..++..|..+-. +| ..|+ ||+.|+||+-++|+-+.|.- ... +....|. ... ......
T Consensus 78 ~~~~~~~~~~~rl~i~~-ll-~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (250)
T PF01501_consen 78 SKRHFSPATFARLFIPD-LL-PDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNK 155 (250)
T ss_dssp CCTCGGGGGGGGGGHHH-HS-TTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTT
T ss_pred ccccccHHHHHHhhhHH-HH-hhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCccc
Confidence 22334555666774444 44 6665 99999999999999888752 222 3333330 000 001235
Q ss_pred CCCceEEEEEeeChHHHHHHHHH-HHHHhcCC---CCCChHHHHHHHcCCCCCCCCcEEEEccccccC--Ccc-----cc
Q 016761 245 NRPNGGFNHVKSNNRSIEFYRFW-YASRETYP---GYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFG--GLC-----EP 313 (383)
Q Consensus 245 ~~~NtGf~yvRst~~ti~f~~~W-~~~~~~~p---~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~F~--gf~-----q~ 313 (383)
...|+|++.+..+.-...-+... ........ ...||+++|.++. -++..||..+-- +.. ..
T Consensus 156 ~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~--------~~~~~L~~~~N~~~~~~~~~~~~~ 227 (250)
T PF01501_consen 156 PYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFY--------GNIKPLPCRYNCQPSWYNQSDDYF 227 (250)
T ss_dssp TSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHT--------TGEEEEEGGGSEEHHHHHHTHHHH
T ss_pred ccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhcc--------ceeEEECchhccccccccccchhh
Confidence 78899999999887665433333 33333332 3689999999983 356677765421 111 00
Q ss_pred CCCCCceEEEeccc
Q 016761 314 SEDFNVVCTMHANC 327 (383)
Q Consensus 314 ~~d~~~p~~vHaN~ 327 (383)
.....++.++|-+-
T Consensus 228 ~~~~~~~~iiHy~g 241 (250)
T PF01501_consen 228 NPILEDAKIIHYSG 241 (250)
T ss_dssp HHHGCC-SEEE--S
T ss_pred HhhcCCeEEEEeCC
Confidence 12345788899743
No 12
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=96.60 E-value=0.0081 Score=58.94 Aligned_cols=153 Identities=19% Similarity=0.235 Sum_probs=81.4
Q ss_pred HHHHHHHcCc-eEEEecceEEeccCCccCcCC-----CCCeeEeccC----CCCC------C-CCCCCCCceEEEEEeeC
Q 016761 195 FLRTVLEMGY-NFIFTDADIMWFRDPFPRFYP-----DADFQVACDH----FLGS------P-DDVQNRPNGGFNHVKSN 257 (383)
Q Consensus 195 ~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~-----~aDi~issD~----~~g~------~-~~~~~~~NtGf~yvRst 257 (383)
++-++|..-+ .||+.|+|||...|.-+.+.. +.-+....+. +.+. + ...+..+|+|++.+--.
T Consensus 89 ~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yFNsGVmlinL~ 168 (280)
T cd06431 89 VLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLDLD 168 (280)
T ss_pred HHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcccccceeeeeeeeeHH
Confidence 4666776445 699999999999999887743 1123322221 1111 1 11234799999987543
Q ss_pred h-HHHHHHHHHHHHHhc------CCCCCChHHHHHHHcCCCCCCCCcEEEEccccc-cC-Cc-ccc-C--CCCCceEEEe
Q 016761 258 N-RSIEFYRFWYASRET------YPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-FG-GL-CEP-S--EDFNVVCTMH 324 (383)
Q Consensus 258 ~-~ti~f~~~W~~~~~~------~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F~-gf-~q~-~--~d~~~p~~vH 324 (383)
. |-..+.++|.....+ ....+||+++|.++.+. .-.+..||..+ +. +. +.. . +....|.++|
T Consensus 169 ~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~-----~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~p~IIH 243 (280)
T cd06431 169 KLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQN-----PFLVYQLPCAWNVQLSDHTRSEQCYRDVSDLKVIH 243 (280)
T ss_pred HHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCC-----cceeEECCCccccccCccchHhHhhcCcCCCEEEE
Confidence 2 112233334321111 13468999999998431 01134455443 21 11 111 0 1235799999
Q ss_pred ccccC--CcccH-HHHHHHHHHHHHHhhcCCccc
Q 016761 325 ANCCY--GLNSK-LIDLRIMLQDWKYFLSLPLTL 355 (383)
Q Consensus 325 aN~~~--G~~~K-~~rLR~~l~dW~~~~~~~~~~ 355 (383)
-+... -..++ .+-+|+ .|++|...+.+.
T Consensus 244 f~g~~KPW~~~~~~~~~~~---~~~~~~~~~~~~ 274 (280)
T cd06431 244 WNSPKKLRVKNKHVEFFRN---LYLTFLEYDGNL 274 (280)
T ss_pred eCCCCCCCCcCCCChHHHH---HHHHHHhcCchh
Confidence 86431 11233 366665 577777666443
No 13
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=95.05 E-value=0.32 Score=48.95 Aligned_cols=204 Identities=15% Similarity=0.116 Sum_probs=97.6
Q ss_pred eEEEEEcCccccCCChhHHHHHHhhhhccCcccccccEEEEE--ecHHHHHHHHhc----CccEEEeecCCcCccccccc
Q 016761 107 TVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIA--LDQKAFERCLTL----HRHCFALITDGVDFHQEAYF 180 (383)
Q Consensus 107 tVIlT~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvA--lD~~a~~~c~~~----g~~c~~~~~~~~d~s~~~~~ 180 (383)
.=|+.++|.+|+.+ +..-+.|+........+ ++-|+. +.++-.+.+.+. +..+-....+...+.+- -
T Consensus 26 i~Iv~~~D~ny~~~---~~vsi~Sil~nn~~~~~--~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~id~~~~~~~--~ 98 (334)
T PRK15171 26 LDIAYGIDKNFLFG---CGVSIASVLLNNPDKSL--VFHVFTDYISDADKQRFSALAKQYNTRINIYLINCERLKSL--P 98 (334)
T ss_pred eeEEEECcHhhHHH---HHHHHHHHHHhCCCCCE--EEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeCHHHHhCC--c
Confidence 33899999999754 22234454322111111 344443 444544444332 33222222111111110 0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCCC--C-eeEe-ccCCC----------CCCCCCCC
Q 016761 181 MTPQYLKMMWKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPDA--D-FQVA-CDHFL----------GSPDDVQN 245 (383)
Q Consensus 181 gS~~f~~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~a--D-i~is-sD~~~----------g~~~~~~~ 245 (383)
.++.+...+..|+ ++-++|...+ .||+.|+||+-.+|--+.+..+- + +... .|... +.+.....
T Consensus 99 ~~~~~s~atY~Rl-~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~ 177 (334)
T PRK15171 99 STKNWTYATYFRF-IIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASG 177 (334)
T ss_pred ccCcCCHHHHHHH-HHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCcccccc
Confidence 1222334444454 3445554456 59999999999998888775432 2 2222 23211 11111134
Q ss_pred CCceEEEEEeeCh-HHHHHHHHHHHHHhcC-----CCCCChHHHHHHHcCCCCCCCCcEEEEccccc-cC-Ccc-ccC--
Q 016761 246 RPNGGFNHVKSNN-RSIEFYRFWYASRETY-----PGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-FG-GLC-EPS-- 314 (383)
Q Consensus 246 ~~NtGf~yvRst~-~ti~f~~~W~~~~~~~-----p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F~-gf~-q~~-- 314 (383)
.+|+|++++--.. |-..+.+.+.+..... -...||++||.++.. ++..||..+ +. +.. +..
T Consensus 178 YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~--------~~~~L~~~wN~~~~~~~~~~~~ 249 (334)
T PRK15171 178 YFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAG--------KVKFIDAKYNTQFSLNYELKDS 249 (334)
T ss_pred ceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcC--------CeEECCHhhCCccchhHHHHhc
Confidence 7899999875432 1111222222222211 124799999999843 466676543 11 111 000
Q ss_pred --CC-CCceEEEecc
Q 016761 315 --ED-FNVVCTMHAN 326 (383)
Q Consensus 315 --~d-~~~p~~vHaN 326 (383)
.. ...|.++|-+
T Consensus 250 ~~~~~~~~p~IIHy~ 264 (334)
T PRK15171 250 VINPVNDETVFIHYI 264 (334)
T ss_pred ccccccCCCEEEEEC
Confidence 01 2468899987
No 14
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=93.53 E-value=0.72 Score=46.44 Aligned_cols=173 Identities=21% Similarity=0.240 Sum_probs=95.9
Q ss_pred EEEEcCccccCC-ChhHHHHHHhhhhccCcccccccEEEEEecHHHHHHHHhcCc--cEEEe--ecCCcCccccccc-cc
Q 016761 109 ILTTLNEAWAAP-DSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHR--HCFAL--ITDGVDFHQEAYF-MT 182 (383)
Q Consensus 109 IlT~~N~a~a~p-gs~ldlFLeS~r~g~~t~~ll~hllVvAlD~~a~~~c~~~g~--~c~~~--~~~~~d~s~~~~~-gS 182 (383)
|+-.+|.+|+.| |..+-.-|++-+ ....-=|+++.-++++=.++.++.-. .++-. ..+...+. ..- -+
T Consensus 5 Iv~a~D~nY~~~~gvsI~SiL~~n~----~~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~--~~~~~~ 78 (325)
T COG1442 5 IAFAFDKNYLIPAGVSIYSLLEHNR----KIFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDIEPFL--DYPPFT 78 (325)
T ss_pred EEEEcccccchhHHHHHHHHHHhCc----cccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEechhhh--cccccc
Confidence 777889999887 433332233222 11222377888899988888877631 12111 11122221 111 46
Q ss_pred HHHHHHHHHHHHHHHHHHHcCceEEEecceEEeccCCccCcCC---CCCeeEeccCCCC----------CCCCCCCCCce
Q 016761 183 PQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYP---DADFQVACDHFLG----------SPDDVQNRPNG 249 (383)
Q Consensus 183 ~~f~~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlRNP~p~f~~---~aDi~issD~~~g----------~~~~~~~~~Nt 249 (383)
+.|..|+..|.- +-+++...=.+|+.|+|||..++=-+.|.- +.=+.+.-|.+.. .....+...|+
T Consensus 79 ~~~s~~v~~R~f-iadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNa 157 (325)
T COG1442 79 KRFSKMVLVRYF-LADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNA 157 (325)
T ss_pred cchHHHHHHHHH-HHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCcc
Confidence 788888888874 445555557799999999999987666532 2222333443321 12234677999
Q ss_pred EEEEEee-----ChHHHHHHHHHHHHHhcCCCCCChHHHHHHHcC
Q 016761 250 GFNHVKS-----NNRSIEFYRFWYASRETYPGYHDQDVLNIIKFD 289 (383)
Q Consensus 250 Gf~yvRs-----t~~ti~f~~~W~~~~~~~p~~~DQ~vfN~l~~~ 289 (383)
|++++-- ..-+-.+++--. .....-...||+++|.++++
T Consensus 158 G~llinl~~W~~~~i~~k~i~~~~-~~~~~~~~~DQdiLN~i~~~ 201 (325)
T COG1442 158 GVLLINLKLWREENIFEKLIELLK-DKENDLLYPDQDILNMIFED 201 (325)
T ss_pred ceeeehHHHHHHhhhHHHHHHHHh-ccccccCCccccHHHHHHHh
Confidence 9998732 111112211110 01111125799999999943
No 15
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=91.91 E-value=0.53 Score=45.71 Aligned_cols=102 Identities=20% Similarity=0.245 Sum_probs=59.0
Q ss_pred eEEEecceEEeccCCccCcCCCC--Cee-EeccCCCCCCCCCCCCCceEEEEEee-----ChHHHHHHHHHHHHHh----
Q 016761 205 NFIFTDADIMWFRDPFPRFYPDA--DFQ-VACDHFLGSPDDVQNRPNGGFNHVKS-----NNRSIEFYRFWYASRE---- 272 (383)
Q Consensus 205 ~VLfsDvDVVWlRNP~p~f~~~a--Di~-issD~~~g~~~~~~~~~NtGf~yvRs-----t~~ti~f~~~W~~~~~---- 272 (383)
.||+.|+|||-.+|=-+.+..+- .+. ...| ..|+|++++-- +.-+.++++ |.+...
T Consensus 116 kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d-----------yfNsGV~linl~~wr~~~i~~~~~~-~~~~~~~~~~ 183 (257)
T cd06429 116 KVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET-----------SWNPGVNVVNLTEWRRQNVTETYEK-WMELNQEEEV 183 (257)
T ss_pred eEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh-----------hcccceEEEeHHHHHhccHHHHHHH-HHHHhhhccc
Confidence 69999999999998777775321 122 2222 67999998754 333444443 433222
Q ss_pred cCCCCCChHHHHHHHcCCCCCCCCcEEEEccccc-c-C-Ccccc--CCCCCceEEEecc
Q 016761 273 TYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-F-G-GLCEP--SEDFNVVCTMHAN 326 (383)
Q Consensus 273 ~~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F-~-gf~q~--~~d~~~p~~vHaN 326 (383)
......||+++|.++.. ++..||..+ + + |+... ......|.++|-+
T Consensus 184 ~~~~~~dqd~ln~~~~~--------~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~ 234 (257)
T cd06429 184 TLWKLITLPPGLIVFYG--------LTSPLDPSWHVRGLGYNYGIRPQDIKAAAVLHFN 234 (257)
T ss_pred chhhcCCccHHHHHccC--------eeEECChHHcccCCcccccccccccCCcEEEEEC
Confidence 12334689999988732 345555432 1 1 11111 1223578999976
No 16
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=90.63 E-value=0.75 Score=44.27 Aligned_cols=126 Identities=16% Similarity=0.083 Sum_probs=66.9
Q ss_pred HHHHHHHHcCc-eEEEecceEEeccCCccCcCC---CCCeeEeccCCCCC-----C---------C-CCCCCCceEEEEE
Q 016761 194 DFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYP---DADFQVACDHFLGS-----P---------D-DVQNRPNGGFNHV 254 (383)
Q Consensus 194 ~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~---~aDi~issD~~~g~-----~---------~-~~~~~~NtGf~yv 254 (383)
-++..+|...+ .||+.|+|+|...|=-+.+.. ++=+.+..|+-... . . ....+.|+|++++
T Consensus 86 L~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGVmli 165 (248)
T cd06432 86 LFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISALYVV 165 (248)
T ss_pred HHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceeeEEE
Confidence 34444887777 699999999988765555532 22122222321100 0 0 1123789999987
Q ss_pred e-----eChHHHHHHHHHHHHHhcCC---CCCChHHHHHHHcCCCCCCCCcEEEEcccccc--CCccccCCCCCceEEEe
Q 016761 255 K-----SNNRSIEFYRFWYASRETYP---GYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYF--GGLCEPSEDFNVVCTMH 324 (383)
Q Consensus 255 R-----st~~ti~f~~~W~~~~~~~p---~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~F--~gf~q~~~d~~~p~~vH 324 (383)
- ...-+-++.+ .++.+...+ ..+||+++|.++.. .++..||..+- -++|--.+ ..++-++|
T Consensus 166 NL~~wR~~~i~~~~~~-~~~~l~~~~~~l~~~DQDiLN~v~~~-------~~i~~Lp~~w~~~~~~~~~~~-~~~~~~~~ 236 (248)
T cd06432 166 DLKRFRRIAAGDRLRG-QYQQLSQDPNSLANLDQDLPNNMQHQ-------VPIFSLPQEWLWCETWCSDES-KKKAKTID 236 (248)
T ss_pred eHHHHHHHhHHHHHHH-HHHHHhcCCCccccCCchhhHHHhcc-------CCeEECChHHHHHHHHhcccc-cCccceee
Confidence 4 3332222111 111222222 24799999999832 34788887761 13333222 44577777
Q ss_pred cccc
Q 016761 325 ANCC 328 (383)
Q Consensus 325 aN~~ 328 (383)
--|-
T Consensus 237 ~~~~ 240 (248)
T cd06432 237 LCNN 240 (248)
T ss_pred cccC
Confidence 6443
No 17
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=88.81 E-value=2.3 Score=40.34 Aligned_cols=94 Identities=23% Similarity=0.261 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHcCceEEEecceEEeccCCccC----cCCCCCeeEeccCCCCCCCCCCCCCceEEEEEeeChHHH
Q 016761 186 LKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPR----FYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSI 261 (383)
Q Consensus 186 ~~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlRNP~p~----f~~~aDi~issD~~~g~~~~~~~~~NtGf~yvRst~~ti 261 (383)
...+.+|--++..+|..===|||.|+||.- =||-.. +.+..|++.- |-+. ...+.+|-|++|.|+.++
T Consensus 25 kd~fFrRHCvva~~L~~~~~vlflDaDigV-vNp~~~iEefid~~~Di~fy-dR~~------n~Ei~agsYlvkNT~~~~ 96 (222)
T PF03314_consen 25 KDKFFRRHCVVAKILPEYDWVLFLDADIGV-VNPNRRIEEFIDEGYDIIFY-DRFF------NWEIAAGSYLVKNTEYSR 96 (222)
T ss_pred hhHHHHHHHHHHHHhccCCEEEEEcCCcee-ecCcccHHHhcCCCCcEEEE-eccc------chhhhhccceeeCCHHHH
Confidence 456778888888998754349999999863 478544 4578888765 3221 345689999999999999
Q ss_pred HHHHHHHHHHhcCCC---CCChHHHHHHH
Q 016761 262 EFYRFWYASRETYPG---YHDQDVLNIIK 287 (383)
Q Consensus 262 ~f~~~W~~~~~~~p~---~~DQ~vfN~l~ 287 (383)
+|++.|...-.+-|. ..|-.++...+
T Consensus 97 ~fl~~~a~~E~~lP~sfhGtDNGAlH~~L 125 (222)
T PF03314_consen 97 DFLKEWADYEFKLPNSFHGTDNGALHIFL 125 (222)
T ss_pred HHHHHHhhhCccCCCccccCccHHHHHHH
Confidence 999999876445553 25777777765
No 18
>PLN02829 Probable galacturonosyltransferase
Probab=84.74 E-value=4 Score=44.36 Aligned_cols=161 Identities=17% Similarity=0.173 Sum_probs=86.7
Q ss_pred cccccHHHH-HHHHHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCC---CCeeEeccCCC-----------CCC-
Q 016761 178 AYFMTPQYL-KMMWKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPD---ADFQVACDHFL-----------GSP- 240 (383)
Q Consensus 178 ~~~gS~~f~-~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~---aDi~issD~~~-----------g~~- 240 (383)
..|..+.|. .++..|+ +|-+++. .+ .||+.|.|||-.+|--+.+..+ .-+....|+.. .++
T Consensus 432 ~k~r~p~ylS~lnY~Rf-yLPeLLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~ 509 (639)
T PLN02829 432 LKYRNPKYLSILNHLRF-YLPEIFP-KLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPL 509 (639)
T ss_pred cccCCcchhhHHHHHHH-HHHHHhc-ccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchH
Confidence 345555554 3344554 3445555 34 6999999999999988776432 21222233311 111
Q ss_pred ----C-CCCCCCceEEEEE-----eeChHHHHHHHHHHHHHhcCCCCCChHHHHHHH--cCCCCCCCCcEEEEccccc-c
Q 016761 241 ----D-DVQNRPNGGFNHV-----KSNNRSIEFYRFWYASRETYPGYHDQDVLNIIK--FDPSIMDIGLKIKFLDTAY-F 307 (383)
Q Consensus 241 ----~-~~~~~~NtGf~yv-----Rst~~ti~f~~~W~~~~~~~p~~~DQ~vfN~l~--~~~~~~~~gl~v~~L~~~~-F 307 (383)
. ...-..|+|++++ |-..-|..+. .|++. ......|||.++|-++ -.+ +++.||..+ +
T Consensus 510 i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~-~wm~~-n~~r~L~dlgaLPp~Ll~F~g-------~i~~LD~rWNv 580 (639)
T PLN02829 510 ISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYH-SWQKL-NHDRQLWKLGTLPPGLITFWK-------RTYPLDRSWHV 580 (639)
T ss_pred hhhccCCcccceecceEEEeHHHHHHhChHHHHH-HHHHH-ccCCccccccCCChHHHHhcC-------ceEecChhhee
Confidence 0 1123578999976 5555555554 67643 2233569999999754 121 244454433 2
Q ss_pred -C-Cccc--cCCCCCceEEEeccccCCc---ccHHHHHHHHHHHHHHhhcCCc
Q 016761 308 -G-GLCE--PSEDFNVVCTMHANCCYGL---NSKLIDLRIMLQDWKYFLSLPL 353 (383)
Q Consensus 308 -~-gf~q--~~~d~~~p~~vHaN~~~G~---~~K~~rLR~~l~dW~~~~~~~~ 353 (383)
+ |+-. ..++...+.++|.|-. ++ +..++++| +.|.+|.....
T Consensus 581 ~GLGy~~~v~~~~i~~aaIIHynG~-~KPWle~~i~~yr---~lW~kYl~~~~ 629 (639)
T PLN02829 581 LGLGYNPNVNQRDIERAAVIHYNGN-MKPWLEIGIPKYR---NYWSKYVDYDQ 629 (639)
T ss_pred cCCCCCcccchhcccCCeEEEECCC-CCccccCCcccch---HHHHHHHhcCc
Confidence 2 1111 1245667899997742 12 22233444 46888866433
No 19
>PLN02718 Probable galacturonosyltransferase
Probab=84.68 E-value=3.5 Score=44.71 Aligned_cols=152 Identities=14% Similarity=0.120 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHcCceEEEecceEEeccCCccCcCCC---CCeeEeccCCCC--------------CC-----CC-C
Q 016761 187 KMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPD---ADFQVACDHFLG--------------SP-----DD-V 243 (383)
Q Consensus 187 ~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlRNP~p~f~~~---aDi~issD~~~g--------------~~-----~~-~ 243 (383)
..+..|+.+-. ++..==.||+.|+|||-.+|--+.+.-+ .-+.+..|+..+ +| .+ .
T Consensus 403 ~~~y~Rl~ipe-llp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn~~ 481 (603)
T PLN02718 403 ALNHARFYLPD-IFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFDPK 481 (603)
T ss_pred HHHHHHHHHHH-HhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhcccCCC
Confidence 44455554433 4442127999999999999998886432 112223343221 00 00 0
Q ss_pred CCCCceEEEEE-----eeChHHHHHHHHHHHHHhcCCCCCChHHHH---HHHcCCCCCCCCcEEEEccccc--cC-Cccc
Q 016761 244 QNRPNGGFNHV-----KSNNRSIEFYRFWYASRETYPGYHDQDVLN---IIKFDPSIMDIGLKIKFLDTAY--FG-GLCE 312 (383)
Q Consensus 244 ~~~~NtGf~yv-----Rst~~ti~f~~~W~~~~~~~p~~~DQ~vfN---~l~~~~~~~~~gl~v~~L~~~~--F~-gf~q 312 (383)
.-..|+|++.+ |-..-|.. +..|+..... ...|||+++| .++ .+ ++..||..+ .+ |+..
T Consensus 482 ~CyfNsGVlLIDLk~WReenITe~-~~~~l~~n~~-~~l~dqdaLpp~LlvF-~g-------ri~~LD~rWNv~gLG~~~ 551 (603)
T PLN02718 482 ACTWAFGMNLFDLEEWRRQKLTSV-YHKYLQLGVK-RPLWKAGSLPIGWLTF-YN-------QTVALDKRWHVLGLGHES 551 (603)
T ss_pred ccccccceEEEeHHHHHhcChHHH-HHHHHHhccC-ccccCcccccHHHHHh-cC-------ceeecChHHhccCccccc
Confidence 12467899965 44444444 4456543222 2569999988 444 21 345555443 22 2111
Q ss_pred --cCCCCCceEEEecccc--CCcccHHHHHHHHHHHHHHhhcCC
Q 016761 313 --PSEDFNVVCTMHANCC--YGLNSKLIDLRIMLQDWKYFLSLP 352 (383)
Q Consensus 313 --~~~d~~~p~~vHaN~~--~G~~~K~~rLR~~l~dW~~~~~~~ 352 (383)
...+...|.++|-|-. --.+..+.+.|+ .|++|+...
T Consensus 552 ~i~~~~i~~aaIIHYnG~~KPWle~~i~~yr~---~W~k~v~~~ 592 (603)
T PLN02718 552 GVGASDIEQAAVIHYDGVMKPWLDIGIGKYKR---YWNIHVPYH 592 (603)
T ss_pred cccccccCCCEEEEECCCCCccccCChhhHHH---HHHhhcCCC
Confidence 1234568999997642 112333455554 599996643
No 20
>PLN02867 Probable galacturonosyltransferase
Probab=84.45 E-value=4 Score=43.69 Aligned_cols=158 Identities=18% Similarity=0.275 Sum_probs=81.1
Q ss_pred cccHHHHHHH-HHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCCC--C-eeEeccCC--------------C--C
Q 016761 180 FMTPQYLKMM-WKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPDA--D-FQVACDHF--------------L--G 238 (383)
Q Consensus 180 ~gS~~f~~m~-w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~a--D-i~issD~~--------------~--g 238 (383)
+.++.|..++ ..|+ +|-+++. -+ .||+.|.|||-.+|--+.+..|- - +..-.|.+ . .
T Consensus 322 ~~~pkylS~lnYlRf-lIPeLLP-~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfs 399 (535)
T PLN02867 322 ALSPSCLSLLNHLRI-YIPELFP-DLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFS 399 (535)
T ss_pred hcChhhhhHHHHHHH-HHHHHhh-ccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhcccc
Confidence 3455665443 4555 3445555 33 69999999999998887775321 1 11111211 0 0
Q ss_pred CC------CCCCCCCceEEEEE-----eeChHHHHHHHHHHHHHh-cCCCCCChHHHHHHH--cCCCCCCCCcEEEEccc
Q 016761 239 SP------DDVQNRPNGGFNHV-----KSNNRSIEFYRFWYASRE-TYPGYHDQDVLNIIK--FDPSIMDIGLKIKFLDT 304 (383)
Q Consensus 239 ~~------~~~~~~~NtGf~yv-----Rst~~ti~f~~~W~~~~~-~~p~~~DQ~vfN~l~--~~~~~~~~gl~v~~L~~ 304 (383)
+| ....-+.|+|++.+ |-.+-|.++ ..|++.-. .....+||+++|..+ -. =++..||.
T Consensus 400 np~i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~-~~~Le~n~~~~~~l~dqd~LN~~LlvF~-------g~v~~LD~ 471 (535)
T PLN02867 400 HPLISSNLDQERCAWLYGMNVFDLKAWRRTNITEAY-HKWLKLSLNSGLQLWQPGALPPALLAFK-------GHVHPIDP 471 (535)
T ss_pred chhhhccCCCCCcceecceeeeeHHHHHHhcHHHHH-HHHHHhchhcccccccccccchHHHHhc-------CcEEECCh
Confidence 11 01123578999986 444444333 34544322 123468999999732 12 13556654
Q ss_pred cc-c-C-Ccccc--C-CCCCceEEEecccc--CCcccHHHHHHHHHHHHHHhhc
Q 016761 305 AY-F-G-GLCEP--S-EDFNVVCTMHANCC--YGLNSKLIDLRIMLQDWKYFLS 350 (383)
Q Consensus 305 ~~-F-~-gf~q~--~-~d~~~p~~vHaN~~--~G~~~K~~rLR~~l~dW~~~~~ 350 (383)
.+ + + |+... . .....|.++|-|-. --++.-++++|+ .|.+|..
T Consensus 472 rWNv~gLgy~~~~~~~~~i~~paIIHYnG~~KPW~e~~~~~yR~---~W~kyl~ 522 (535)
T PLN02867 472 SWHVAGLGSRPPEVPREILESAAVLHFSGPAKPWLEIGFPEVRS---LWYRHVN 522 (535)
T ss_pred hhcccCCCcccccchhhhcCCcEEEEECCCCCcccccCCCchhH---HHHHhcC
Confidence 43 2 2 22111 1 22467999998732 011223345544 6888843
No 21
>PLN02659 Probable galacturonosyltransferase
Probab=83.43 E-value=5.2 Score=42.79 Aligned_cols=157 Identities=20% Similarity=0.261 Sum_probs=82.2
Q ss_pred cccHHHHHHH-HHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCCC--CeeE-eccC-----CC-----------C
Q 016761 180 FMTPQYLKMM-WKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPDA--DFQV-ACDH-----FL-----------G 238 (383)
Q Consensus 180 ~gS~~f~~m~-w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~a--Di~i-ssD~-----~~-----------g 238 (383)
+..+.|..|. ..|+. +=++|. .+ .||+.|.|||-.+|=-+.+..|- .+.. ..|+ +. +
T Consensus 321 ~~~p~ylS~~nY~RL~-IPeLLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s 398 (534)
T PLN02659 321 ALSPKYNSVMNHIRIH-LPELFP-SLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFS 398 (534)
T ss_pred cCCccceeHHHHHHHH-HHHHhh-hcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhccc
Confidence 4566666544 45543 444444 23 69999999999988777664321 1222 2232 10 0
Q ss_pred CCC-----C-CCCCCceEEEEE-----eeChHHHHHHHHHHHHH-hcCCCCCChHHHH---HHHcCCCCCCCCcEEEEcc
Q 016761 239 SPD-----D-VQNRPNGGFNHV-----KSNNRSIEFYRFWYASR-ETYPGYHDQDVLN---IIKFDPSIMDIGLKIKFLD 303 (383)
Q Consensus 239 ~~~-----~-~~~~~NtGf~yv-----Rst~~ti~f~~~W~~~~-~~~p~~~DQ~vfN---~l~~~~~~~~~gl~v~~L~ 303 (383)
+|. + ..-+.|+|++++ |-..-|.++++ |++.. ...-..|||+++| .++ .+ ++..||
T Consensus 399 ~p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~-~l~~n~~~~l~l~DQdaLp~~LivF-~g-------~v~~LD 469 (534)
T PLN02659 399 HPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHH-WLEENLKSDLSLWQLGTLPPGLIAF-HG-------HVHVID 469 (534)
T ss_pred chhhhhccCccccceecceeEeeHHHHHhcChHHHHHH-HHHhcccccccccccccchHHHHHh-cC-------CEEECC
Confidence 110 0 122568899976 44455555443 44322 1223468999995 444 22 355555
Q ss_pred ccc--cCCcccc---CCCCCceEEEecc-----ccCCcccHHHHHHHHHHHHHHhhcCCc
Q 016761 304 TAY--FGGLCEP---SEDFNVVCTMHAN-----CCYGLNSKLIDLRIMLQDWKYFLSLPL 353 (383)
Q Consensus 304 ~~~--F~gf~q~---~~d~~~p~~vHaN-----~~~G~~~K~~rLR~~l~dW~~~~~~~~ 353 (383)
..+ ++-..+. ..+...|.++|-| |... -++..| ..|.+|.....
T Consensus 470 ~rWN~~gLg~~~~~~~~~i~~paIIHYnG~~KPW~~~---~~~~yr---~~W~kYl~~s~ 523 (534)
T PLN02659 470 PFWHMLGLGYQENTSLADAESAGVVHFNGRAKPWLDI---AFPQLR---PLWAKYIDSSD 523 (534)
T ss_pred hhheecCCcccccccccccCCcEEEEECCCCCccccc---cCCcch---hHHHHHhccCC
Confidence 433 2211111 1244679999976 3311 123333 46988876443
No 22
>PLN02870 Probable galacturonosyltransferase
Probab=79.62 E-value=4 Score=43.61 Aligned_cols=150 Identities=19% Similarity=0.223 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCCC--CeeE-eccCCCC----------------CC------CCC
Q 016761 190 WKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPDA--DFQV-ACDHFLG----------------SP------DDV 243 (383)
Q Consensus 190 w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~a--Di~i-ssD~~~g----------------~~------~~~ 243 (383)
..|+. +-+++. -+ .||+.|.|||-.+|--+.+..|- -+.. ..|+..+ +| +..
T Consensus 331 y~Rl~-LPelLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i~~~fd~~ 408 (533)
T PLN02870 331 HLRIY-LPELFP-NLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLDPE 408 (533)
T ss_pred HHHHH-HHHHhh-hcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccchhhcccCcc
Confidence 34443 334444 23 79999999999999888775321 1222 2332111 11 001
Q ss_pred CCCCceEEEEE-----eeChHHHHHHHHHHHH-HhcCCCCCChHHHH---HHHcCCCCCCCCcEEEEccccc--cC-Ccc
Q 016761 244 QNRPNGGFNHV-----KSNNRSIEFYRFWYAS-RETYPGYHDQDVLN---IIKFDPSIMDIGLKIKFLDTAY--FG-GLC 311 (383)
Q Consensus 244 ~~~~NtGf~yv-----Rst~~ti~f~~~W~~~-~~~~p~~~DQ~vfN---~l~~~~~~~~~gl~v~~L~~~~--F~-gf~ 311 (383)
.-..|+|++++ |-..-|.++++ |++. ..+.-..|||+++| .++ .+ ++..||..+ ++ |+.
T Consensus 409 ~cyfNSGVlLINL~~WRe~nITek~~~-~l~~n~~~~l~l~DQdaLp~~livf-~g-------~v~~LD~rWN~~gLgy~ 479 (533)
T PLN02870 409 ECAWAYGMNIFDLRAWRKTNIRETYHS-WLKENLKSNLTMWKLGTLPPALIAF-KG-------HVHPIDPSWHMLGLGYQ 479 (533)
T ss_pred cceeeccchhccHHHHHHcChHHHHHH-HHHhhhhcCceecccccccHhHHHh-cC-------ceEECChHHhcCCCCCc
Confidence 22467999965 55555554443 4432 22223469999995 444 21 355665543 22 221
Q ss_pred c--cCCCCCceEEEeccccC--CcccHHHHHHHHHHHHHHhhcCCc
Q 016761 312 E--PSEDFNVVCTMHANCCY--GLNSKLIDLRIMLQDWKYFLSLPL 353 (383)
Q Consensus 312 q--~~~d~~~p~~vHaN~~~--G~~~K~~rLR~~l~dW~~~~~~~~ 353 (383)
. .......|.++|-|-.. -++.-+++.| ..|++|.....
T Consensus 480 ~~~~~~~i~~aaIIHY~G~~KPW~~~~~~~yr---~~W~kYl~~s~ 522 (533)
T PLN02870 480 SKTNIESVKKAAVIHYNGQSKPWLEIGFEHLR---PFWTKYVNYSN 522 (533)
T ss_pred ccccccccCCcEEEEECCCCCCccccCccchh---HHHHHHHccCc
Confidence 1 11234679999976320 0011122222 46888876443
No 23
>PLN02523 galacturonosyltransferase
Probab=77.44 E-value=2.2 Score=45.64 Aligned_cols=144 Identities=15% Similarity=0.212 Sum_probs=76.8
Q ss_pred HHHHHHcCceEEEecceEEeccCCccCcCCCC-C-ee-EeccCCC-----------CCCCCCCCCCce-------EEEEE
Q 016761 196 LRTVLEMGYNFIFTDADIMWFRDPFPRFYPDA-D-FQ-VACDHFL-----------GSPDDVQNRPNG-------GFNHV 254 (383)
Q Consensus 196 l~~vL~lGy~VLfsDvDVVWlRNP~p~f~~~a-D-i~-issD~~~-----------g~~~~~~~~~Nt-------Gf~yv 254 (383)
|=+++..==.||+.|.|||-.+|--+.+..|- + +. ...|++. ++|. ....+|+ |++++
T Consensus 370 IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~-i~~yFNs~aC~wnsGVmlI 448 (559)
T PLN02523 370 LPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYLNFSHPL-IKEKFNPKACAWAYGMNIF 448 (559)
T ss_pred HHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHHHHHHHhhcccchh-hhhCcCCCcccccCCcEEE
Confidence 44555532269999999999999888875321 1 22 2234421 1111 1124555 99976
Q ss_pred -----eeChHHHHHHHHHHHHHhcCCCCCChHHHHH---HHcCCCCCCCCcEEEEccccc-cCC-ccc---cCCCCCceE
Q 016761 255 -----KSNNRSIEFYRFWYASRETYPGYHDQDVLNI---IKFDPSIMDIGLKIKFLDTAY-FGG-LCE---PSEDFNVVC 321 (383)
Q Consensus 255 -----Rst~~ti~f~~~W~~~~~~~p~~~DQ~vfN~---l~~~~~~~~~gl~v~~L~~~~-F~g-f~q---~~~d~~~p~ 321 (383)
|-..-|.++ ..|... ......|||+++|. ++ .+ ++..||..+ +.| +.. ...+..+|.
T Consensus 449 NL~~WRe~nITek~-~~w~~l-n~~~~l~DqdaLpp~LivF-~g-------ri~~LD~rWNvlglGy~~~i~~~~i~~pa 518 (559)
T PLN02523 449 DLDAWRREKCTEQY-HYWQNL-NENRTLWKLGTLPPGLITF-YS-------TTKPLDKSWHVLGLGYNPSISMDEIRNAA 518 (559)
T ss_pred eHHHHHHhchHHHH-HHHHHh-ccccccccccccchHHHHh-cC-------ceEecCchhhccCCccCCCccccccCCCE
Confidence 445555554 567542 33345799999973 33 22 245554443 211 111 123457899
Q ss_pred EEecccc--CCcccHHHHHHHHHHHHHHhhcCCc
Q 016761 322 TMHANCC--YGLNSKLIDLRIMLQDWKYFLSLPL 353 (383)
Q Consensus 322 ~vHaN~~--~G~~~K~~rLR~~l~dW~~~~~~~~ 353 (383)
++|-|-. --.+....+.| +.|.+|.....
T Consensus 519 IIHYnG~~KPWle~~i~~yr---~~W~kYl~~~~ 549 (559)
T PLN02523 519 VIHFNGNMKPWLDIAMNQFK---PLWTKYVDYDM 549 (559)
T ss_pred EEEECCCCCccccCCCCcch---HHHHHHHccCC
Confidence 9997632 01122223333 45888876444
No 24
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=75.36 E-value=8.1 Score=42.13 Aligned_cols=158 Identities=18% Similarity=0.230 Sum_probs=84.9
Q ss_pred cccccHHHHHHH-HHHHHHHHHHHHcCceEEEecceEEeccCCccCcCCC--CCee-EeccCCC-----------CCCC-
Q 016761 178 AYFMTPQYLKMM-WKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPD--ADFQ-VACDHFL-----------GSPD- 241 (383)
Q Consensus 178 ~~~gS~~f~~m~-w~K~~~l~~vL~lGy~VLfsDvDVVWlRNP~p~f~~~--aDi~-issD~~~-----------g~~~- 241 (383)
..|-.+.|..+. ..|+ +|-++|.-=-.||+.|+|||-.+|--+.+.-+ ..+. +.-|+.. .+|.
T Consensus 450 ~k~r~p~ylS~lnY~Rf-~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i 528 (657)
T PLN02910 450 LKYRNPKYLSMLNHLRF-YLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPKI 528 (657)
T ss_pred cccCCcchhhHHHHHHH-HHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChhh
Confidence 345556665443 3444 44555552126999999999999988876432 1122 2233321 1111
Q ss_pred -----CCCCCCceEEEEE-----eeChHHHHHHHHHHHHHhcCCCCCChHHHHH---HHcCCCCCCCCcEEEEccccc--
Q 016761 242 -----DVQNRPNGGFNHV-----KSNNRSIEFYRFWYASRETYPGYHDQDVLNI---IKFDPSIMDIGLKIKFLDTAY-- 306 (383)
Q Consensus 242 -----~~~~~~NtGf~yv-----Rst~~ti~f~~~W~~~~~~~p~~~DQ~vfN~---l~~~~~~~~~gl~v~~L~~~~-- 306 (383)
...-..|+|++++ |-..-|. .++.|.+.. .....|||.++|- ++ .+. +..||..+
T Consensus 529 ~~yFNs~aCyfNsGVmVIDL~~WRe~nITe-~ye~w~eln-~~~~L~dqgsLPpgLLvF-~g~-------i~pLD~rWNv 598 (657)
T PLN02910 529 SENFDPNACGWAFGMNMFDLKEWRKRNITG-IYHYWQDLN-EDRTLWKLGSLPPGLITF-YNL-------TYPLDRSWHV 598 (657)
T ss_pred hhccCCCCceeecccEEEeHHHHHHhhHHH-HHHHHHHhc-ccccccccCCCChHHHHH-hCc-------eeecCchhee
Confidence 0012346799976 4444444 777887643 3345799999994 33 222 33444433
Q ss_pred cCCcccc---CCCCCceEEEeccccCCc---ccHHHHHHHHHHHHHHhhc
Q 016761 307 FGGLCEP---SEDFNVVCTMHANCCYGL---NSKLIDLRIMLQDWKYFLS 350 (383)
Q Consensus 307 F~gf~q~---~~d~~~p~~vHaN~~~G~---~~K~~rLR~~l~dW~~~~~ 350 (383)
.+-++.+ ......|.++|.|-. ++ +..+++.| +.|.+|..
T Consensus 599 ~GLGyd~~v~~~~i~~AAVLHynG~-~KPWl~l~i~~Yr---~~W~kYl~ 644 (657)
T PLN02910 599 LGLGYDPALNQTEIENAAVVHYNGN-YKPWLDLAIAKYK---PYWSRYVQ 644 (657)
T ss_pred cCCCCCcccccccccCcEEEEeCCC-CCcccccCcccch---HHHHHHcc
Confidence 1201111 234567999997732 11 22233433 46998866
No 25
>PLN02742 Probable galacturonosyltransferase
Probab=68.38 E-value=15 Score=39.52 Aligned_cols=158 Identities=15% Similarity=0.138 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHcCceEEEecceEEeccCCccCcCCC---CCeeEeccC------CC-----CCC-----CC-CCCC
Q 016761 187 KMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPD---ADFQVACDH------FL-----GSP-----DD-VQNR 246 (383)
Q Consensus 187 ~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlRNP~p~f~~~---aDi~issD~------~~-----g~~-----~~-~~~~ 246 (383)
-.+..|+.+ -+++..==.||+.|+|||-.+|--+.+..+ .=+...-|| |. .+| .+ ..-.
T Consensus 338 ~~~y~R~~l-P~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~~~aC~ 416 (534)
T PLN02742 338 MLNHLRFYI-PEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHFDPDACG 416 (534)
T ss_pred HHHHHHHHH-HHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhhhhhhhhcccchhhhccCCCCccc
Confidence 344455544 345542127999999999999988877432 112223344 11 111 11 1234
Q ss_pred CceEEEEE-----eeChHHHHHHHHHHHHHhcCCCCCChHHHHHHH--cCCCCCCCCcEEEEccccccCCccccCCCCCc
Q 016761 247 PNGGFNHV-----KSNNRSIEFYRFWYASRETYPGYHDQDVLNIIK--FDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNV 319 (383)
Q Consensus 247 ~NtGf~yv-----Rst~~ti~f~~~W~~~~~~~p~~~DQ~vfN~l~--~~~~~~~~gl~v~~L~~~~F~gf~q~~~d~~~ 319 (383)
.|+|++.+ |-..-|. .+..|.+. ......|||+++|..+ -.+.+....-++.+++.-+-.+ -.......
T Consensus 417 fNsGV~ViDL~~WRe~nITe-~~~~w~e~-n~~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~gLG~~~~--v~~~~i~~ 492 (534)
T PLN02742 417 WAFGMNVFDLVAWRKANVTA-IYHYWQEQ-NVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLGLGYDTN--IDPRLIES 492 (534)
T ss_pred cccCcEEEeHHHHHhhcHHH-HHHHHHHh-ccccccccccccchHHHHHcCcceecChhheecccccccc--cchhhccC
Confidence 68999975 4444455 66778753 3334579999999752 1222222222222222111000 01134567
Q ss_pred eEEEeccccC--CcccHHHHHHHHHHHHHHhhcCC
Q 016761 320 VCTMHANCCY--GLNSKLIDLRIMLQDWKYFLSLP 352 (383)
Q Consensus 320 p~~vHaN~~~--G~~~K~~rLR~~l~dW~~~~~~~ 352 (383)
|.++|-|-.. -.+..+++.|. .|.+|....
T Consensus 493 aaILHynG~~KPWl~~~i~~yr~---~W~kYl~~s 524 (534)
T PLN02742 493 AAVLHFNGNMKPWLKLAIERYKP---LWERYVNYS 524 (534)
T ss_pred CeEEEECCCCCcccccCCcccch---HHHHHHccC
Confidence 8899976330 01222234444 688886543
No 26
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=60.23 E-value=14 Score=37.78 Aligned_cols=180 Identities=14% Similarity=0.103 Sum_probs=102.3
Q ss_pred HHHHhcCccEEEeecCCcCcccccccccHHHHHHHHHHHHHHHHHHHcCce---EEEecceEEeccCCccCc----C---
Q 016761 155 ERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYN---FIFTDADIMWFRDPFPRF----Y--- 224 (383)
Q Consensus 155 ~~c~~~g~~c~~~~~~~~d~s~~~~~gS~~f~~m~w~K~~~l~~vL~lGy~---VLfsDvDVVWlRNP~p~f----~--- 224 (383)
++|+.+|..-+...+... ..| .=....|.|+-+|++.+..=-+ +-+.|.|.+.+ ||---+ +
T Consensus 133 dYA~rHgy~~~~~~~~~~-----~~~---~e~~~~W~KiP~Ir~tM~kyP~AeWIWWlD~DAlim-n~~lsL~~~ilk~~ 203 (364)
T KOG4748|consen 133 DYARRHGYEFEYKNATLD-----KRY---HELPGVWAKLPAIRQTMLKYPDAEWIWWLDQDALIM-NPDLSLQDHILKPE 203 (364)
T ss_pred HHHHHhCCeEEEEecccc-----ccc---ccccchhHHhHHHHHHHHHCCCCcEEEEecccchhh-CcccchhHHhcCHH
Confidence 689999987665543211 111 2235679999999999987655 66777776543 332111 1
Q ss_pred -------C-CCCeeEecc-------CCCC-C--------CCCCCCCCceEEEEEeeChHHHHHHHHHHHHHhcC--CCCC
Q 016761 225 -------P-DADFQVACD-------HFLG-S--------PDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETY--PGYH 278 (383)
Q Consensus 225 -------~-~aDi~issD-------~~~g-~--------~~~~~~~~NtGf~yvRst~~ti~f~~~W~~~~~~~--p~~~ 278 (383)
+ +.-.+..-. .+.- + +.| .+.+|+|=+++|..+-+..+++.|-+....+ -+..
T Consensus 204 ~L~~~l~~nd~~~~~~~n~~~~~~~~~~~d~~~~~~~ii~qD-~nG~naGSfLirns~~~~~llD~w~dp~l~~~~~~~~ 282 (364)
T KOG4748|consen 204 NLVTHLLRNDQKSINPLNIFRLRPRTPSLDDLEDIAFIIPQD-CNGINAGSFLIRNSEWGRLLLDAWNDPLLYELLWGQK 282 (364)
T ss_pred HHHHhhccccccccccCCccccccccccccchhhhceecccC-CCCccccceEEecCccchhHHHhccCHHHHhhccchH
Confidence 1 111111100 0000 0 111 3458999999999999999999996644433 3468
Q ss_pred ChHHHHHHHcCCCCCCCCcEEEEccccccCCccccCC---CCCceEEEeccccCCcccHHHHHHHHHHHHHHhhcCCc
Q 016761 279 DQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSE---DFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSLPL 353 (383)
Q Consensus 279 DQ~vfN~l~~~~~~~~~gl~v~~L~~~~F~gf~q~~~---d~~~p~~vHaN~~~G~~~K~~rLR~~l~dW~~~~~~~~ 353 (383)
||.++-.++... ...-=.+.+|+..++-.+-+.+- +-.-+.++|.-=|.+.+ ..++.|.+|..+-.
T Consensus 283 Eq~al~~~~e~h--~~l~~~vgilp~r~ins~~~~~~~~g~~egdlvvhFaGC~~~~-------~C~~~~~~y~~~~~ 351 (364)
T KOG4748|consen 283 EQDALGHFLENH--PQLHSHVGILPLRYINSYPNGAPGYGYEEGDLVVHFAGCYVRN-------RCLEEMEKYFNLID 351 (364)
T ss_pred HHHHHHHHHhhc--hhhhhheeeccHHHHhcCCCCCCCCccccCCeEEEecccccHh-------HHHHHHHHHHHHHH
Confidence 999998887321 22223467777766543322221 22357899988884421 23455555554433
No 27
>PLN02769 Probable galacturonosyltransferase
Probab=52.57 E-value=47 Score=36.44 Aligned_cols=146 Identities=14% Similarity=0.076 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHcCceEEEecceEEeccCCccCcCCCC--Cee-EeccCCC--CC--------CCC-CCCCCceEEEEE--
Q 016761 191 KRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDA--DFQ-VACDHFL--GS--------PDD-VQNRPNGGFNHV-- 254 (383)
Q Consensus 191 ~K~~~l~~vL~lGy~VLfsDvDVVWlRNP~p~f~~~a--Di~-issD~~~--g~--------~~~-~~~~~NtGf~yv-- 254 (383)
.|+. |=+++..==.||+.|.|||-.+|--+.+.-|- .+. ...|+.. +. ..+ ..-..|+|++.+
T Consensus 441 ~Rfy-IPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl~~~~~yl~~~~F~~~~CyFNSGVLLINL 519 (629)
T PLN02769 441 SHFL-LPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRLGQLKNYLGDTNFDTNSCAWMSGLNVIDL 519 (629)
T ss_pred HHHH-HHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhhhhhhhhhcccCCCccccccccCeeEeeH
Confidence 4443 44555521279999999999999888875321 122 2223211 10 000 022469999987
Q ss_pred ---eeChHHHHHHHHHHHHHhc-CCCCCChH---HHHHHHcCCCCCCCCcEEEEccccc-cC--Cccc--cCCCCCceEE
Q 016761 255 ---KSNNRSIEFYRFWYASRET-YPGYHDQD---VLNIIKFDPSIMDIGLKIKFLDTAY-FG--GLCE--PSEDFNVVCT 322 (383)
Q Consensus 255 ---Rst~~ti~f~~~W~~~~~~-~p~~~DQ~---vfN~l~~~~~~~~~gl~v~~L~~~~-F~--gf~q--~~~d~~~p~~ 322 (383)
|-..-|..+.+ |.+.... ....++|. ++|.++. =++..||..+ +. |+.. .......|.+
T Consensus 520 ~~WRk~nITe~~~~-~~~~~~~~~~~~~~~~~Lp~lnlvF~--------g~v~~LD~rWNv~gLG~~~~i~~~~i~~paI 590 (629)
T PLN02769 520 DKWRELDVTETYLK-LLQKFSKDGEESLRAAALPASLLTFQ--------DLIYPLDDRWVLSGLGHDYGIDEQAIKKAAV 590 (629)
T ss_pred HHHHHhCHHHHHHH-HHHHhhhcccccccccCcCHHHHHhc--------CeEEECCHHHccccccccccccccccCCcEE
Confidence 43444444443 4333222 22334444 4444542 2456666544 22 2211 1233468999
Q ss_pred Eecccc---CCcccHHHHHHHHHHHHHHhhc
Q 016761 323 MHANCC---YGLNSKLIDLRIMLQDWKYFLS 350 (383)
Q Consensus 323 vHaN~~---~G~~~K~~rLR~~l~dW~~~~~ 350 (383)
+|-|-. +. +.-.++.|+ .|.+|..
T Consensus 591 IHYnG~~KPW~-e~~i~~yr~---~W~kYl~ 617 (629)
T PLN02769 591 LHYNGNMKPWL-ELGIPKYKK---YWKRFLN 617 (629)
T ss_pred EEECCCCCCcc-CCCCChHHH---HHHHHhc
Confidence 997622 11 112234444 5777755
No 28
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=46.54 E-value=9.8 Score=37.00 Aligned_cols=32 Identities=22% Similarity=0.199 Sum_probs=25.6
Q ss_pred eEEEecceEEeccCCccCcCCCCCeeEeccCCCCCCCCCCCCCceEEEEE
Q 016761 205 NFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHV 254 (383)
Q Consensus 205 ~VLfsDvDVVWlRNP~p~f~~~aDi~issD~~~g~~~~~~~~~NtGf~yv 254 (383)
+|||.|+|.|-++||-.+|.. ..+-.+|.+|+
T Consensus 93 evllLDaD~vpl~~p~~lF~~------------------~~yk~tG~lfw 124 (271)
T PF11051_consen 93 EVLLLDADNVPLVDPEKLFES------------------EEYKKTGALFW 124 (271)
T ss_pred eEEEEcCCcccccCHHHHhcC------------------ccccccCEEEE
Confidence 599999999999999887731 23447888888
No 29
>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase. Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].
Probab=42.78 E-value=33 Score=24.29 Aligned_cols=26 Identities=12% Similarity=0.147 Sum_probs=18.5
Q ss_pred cCCCcchhHHHHHHHHHHHHHHhhcc
Q 016761 32 ESAARPRALFSVASILLTCILVYGVA 57 (383)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (383)
+|.-+--++.+++++++.|++.||.-
T Consensus 8 ~GVIlVF~lVglv~i~iva~~iYRKw 33 (43)
T PF08114_consen 8 GGVILVFCLVGLVGIGIVALFIYRKW 33 (43)
T ss_pred CCeeeehHHHHHHHHHHHHHHHHHHH
Confidence 44333344778888999999999853
No 30
>COG1512 Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
Probab=35.31 E-value=2e+02 Score=28.36 Aligned_cols=64 Identities=19% Similarity=0.418 Sum_probs=37.0
Q ss_pred CCCCCCccccccchhHHHHHHHHhcCC--CeEEEEEcCcc------ccCCChhHHHHHHhhhhccCccccccc--EEEEE
Q 016761 79 SALDNDSLQVSEENRLETVLNNAAMQD--RTVILTTLNEA------WAAPDSVIDLFLESFRIGDGTRKLLNH--LVIIA 148 (383)
Q Consensus 79 ~~~~~~~~~~~~~~~L~~lL~~aA~~d--~tVIlT~~N~a------~a~pgs~ldlFLeS~r~g~~t~~ll~h--llVvA 148 (383)
+.|....+...|...|++.|+.-+.+. ..++||+-.-. |+ .++ .+.|+.|+... ++ +||||
T Consensus 36 V~D~t~~Ls~~e~~~Leq~l~~L~~kt~~QiaVv~vpSt~g~~IE~ya-----~rl-fd~W~lG~k~~---~dGvLLlVa 106 (271)
T COG1512 36 VTDLTGTLSAAERGALEQQLADLEQKTGAQIAVVTVPSTGGETIEQYA-----TRL-FDKWKLGDKAQ---DDGVLLLVA 106 (271)
T ss_pred eeeccccCChhhHHHHHHHHHHHHhccCCeEEEEEecCCCCCCHHHHH-----HHH-HHhcCCCcccc---CCCEEEEEE
Confidence 444455555566789999999888654 34444443322 22 333 34566664322 22 67888
Q ss_pred ecH
Q 016761 149 LDQ 151 (383)
Q Consensus 149 lD~ 151 (383)
+|+
T Consensus 107 ~~d 109 (271)
T COG1512 107 MND 109 (271)
T ss_pred cCC
Confidence 887
No 31
>PF02484 Rhabdo_NV: Rhabdovirus Non-virion protein; InterPro: IPR003490 Infectious hematopoietic necrosis virus (IHNV) is a member of the family Rhabdoviridae. The non-virion protein (NV) is coded for by one of the six genes of the IHNV genome [], but is absent in vesiculovirus-like rhabdovirus [].
Probab=29.32 E-value=65 Score=26.72 Aligned_cols=28 Identities=29% Similarity=0.418 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHcCceEEEecceEEeccC
Q 016761 191 KRIDFLRTVLEMGYNFIFTDADIMWFRD 218 (383)
Q Consensus 191 ~K~~~l~~vL~lGy~VLfsDvDVVWlRN 218 (383)
.|-.+-+.+--.|+.|||-|.|+||-.+
T Consensus 13 l~~~lryk~~va~hgflfddg~~vw~e~ 40 (111)
T PF02484_consen 13 LRDALRYKNEVARHGFLFDDGDIVWSED 40 (111)
T ss_pred HHHHHHHHhhccccceEecCCcEEEecC
Confidence 3444444455579999999999999764
No 32
>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]
Probab=29.30 E-value=46 Score=34.00 Aligned_cols=38 Identities=21% Similarity=0.410 Sum_probs=30.8
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHcCce-EEEecceEEec
Q 016761 179 YFMTPQYLKMMWKRIDFLRTVLEMGYN-FIFTDADIMWF 216 (383)
Q Consensus 179 ~~gS~~f~~m~w~K~~~l~~vL~lGy~-VLfsDvDVVWl 216 (383)
++|.+.|++-+-.-+-++-.+-..|++ |+|.|||.+=.
T Consensus 191 Q~g~~~FNRakL~NVGf~eAlkd~~wdCfIFHDVDllPe 229 (372)
T KOG3916|consen 191 QAGNKPFNRAKLLNVGFLEALKDYGWDCFIFHDVDLLPE 229 (372)
T ss_pred ecCCCcccHHHhhhhHHHHHHHhcCCCEEEEeccccccc
Confidence 467778888877788888777789999 89999998733
No 33
>PF05726 Pirin_C: Pirin C-terminal cupin domain; InterPro: IPR008778 This entry represents C-terminal domain of Pirin proteins from both eukaryotes and prokaryotes. The function of Pirin is unknown but the gene coding for this protein is known to be expressed in all tissues in the human body although it is expressed most strongly in the liver and heart. Pirin is known to be a nuclear protein, exclusively localised within the nucleoplasma and predominantly concentrated within dot-like subnuclear structures []. Pirin is composed of two structurally similar domains arranged face to face. The N-terminal domain additionally features four beta-strands, and the C-terminal domain also includes four additional -strands and a short alpha-helix. Although the two domains are similar, the C-terminal domain of Pirin differs from the N-terminal domain as it does not contain a metal binding site and its sequence does not contain the conserved metal-coordinating residues []. Pirin is confirmed to be a member of the cupin superfamily on the basis of primary sequence and structural similarity. The presence of a metal binding site in the N-terminal beta-barrel of Pirin, may be significant in its role in regulating NFI DNA replication and NF-kappaB transcription factor activity []. Pirin structure has been found to closely resemble members of the cupin superfamily. Pirin contains the two characteristic sequences of the cupin superfamily, namely PG-(X)5-HXH-(X)4-E-(X)6-G and G-(X)5-PXG-(X)2-H-(X)3-N separated by a variable stretch of 15-50 amino acids. These motifs are best conserved in the N-terminal where the conserved histidine and glutamic acid residues correspond to the metal-coordinating residues. The C-terminal domain motifs lack the metal binding residues normally associated with the cupin fold []. Pirin was identified to be a metal-binding protein [], and was found that the metal-binding residues of Pirins are highly conserved across mammals, plants, fungi, and prokaryotic organisms. Pirin acts as a cofactor for the transcription factor NFI, the regulatory mechanism of which is generally believed to require the assistance of a metal ion []. Structural data supports the hypothesis that the bound iron of Pirin may participate in this transcriptional regulation by enhancing and stabilising the formation of the p50,Bcl3,DNA complex []. Metals have been implicated directly or indirectly in the NF-kappaB family of transcription factors that control expression of a number of early response genes associated with inflammatory responses, cell growth, cell cycle progression, and neoplastic transformation []. However, most metal-dependent transcription factors are DNA-binding proteins that bind to specific sequences when the metal binds to the protein. Pirin, on the other hand, appears to function differently and bind to the transcription factor DNA complex [].; PDB: 1J1L_A 3ACL_A 2P17_A.
Probab=28.64 E-value=40 Score=27.81 Aligned_cols=31 Identities=10% Similarity=0.106 Sum_probs=20.5
Q ss_pred CCCCCceEEEeccccCCcccHHHHHHHHHHHHHH
Q 016761 314 SEDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKY 347 (383)
Q Consensus 314 ~~d~~~p~~vHaN~~~G~~~K~~rLR~~l~dW~~ 347 (383)
.+-+++|++.|.|+. -+-.+.+.++.+||++
T Consensus 70 GePl~Epi~~~GpFV---mnt~eeI~qA~~dy~~ 100 (104)
T PF05726_consen 70 GEPLNEPIVQYGPFV---MNTREEIEQAFEDYQN 100 (104)
T ss_dssp E----S--EEETTEE---ESSHHHHHHHHHHHHC
T ss_pred ccCCCCCEEEECCcc---cCCHHHHHHHHHHHHh
Confidence 356789999999999 4556778889999974
No 34
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=23.72 E-value=4.9e+02 Score=24.15 Aligned_cols=55 Identities=20% Similarity=0.240 Sum_probs=33.2
Q ss_pred CeEEEEEcCccccCCChhHHHHHHhhhhccCcccccccEEEEEe--cHHHHHHHHhcCccEEEeec
Q 016761 106 RTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIAL--DQKAFERCLTLHRHCFALIT 169 (383)
Q Consensus 106 ~tVIlT~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvAl--D~~a~~~c~~~g~~c~~~~~ 169 (383)
|.+|++..|... +.-+++.+..+. ....-++|++- |..+.++|++.|+||+..+.
T Consensus 3 ki~vl~sg~gs~------~~~ll~~~~~~~---~~~~I~~vvs~~~~~~~~~~a~~~gIp~~~~~~ 59 (200)
T PRK05647 3 RIVVLASGNGSN------LQAIIDACAAGQ---LPAEIVAVISDRPDAYGLERAEAAGIPTFVLDH 59 (200)
T ss_pred eEEEEEcCCChh------HHHHHHHHHcCC---CCcEEEEEEecCccchHHHHHHHcCCCEEEECc
Confidence 456676666444 666666665432 11222344444 34577899999999988643
No 35
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=20.60 E-value=4.6e+02 Score=21.21 Aligned_cols=94 Identities=17% Similarity=0.132 Sum_probs=47.3
Q ss_pred eEEEEEcCccccCCChhHHHHHHhhhhccCcccccccEEEEEecH--HHHHHHHhc---CccEEEeecCCcCcccccccc
Q 016761 107 TVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQ--KAFERCLTL---HRHCFALITDGVDFHQEAYFM 181 (383)
Q Consensus 107 tVIlT~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvAlD~--~a~~~c~~~---g~~c~~~~~~~~d~s~~~~~g 181 (383)
+||+.+-|.. ..|.-.|+|++.- + .....++|+--.. ++.+.+++. ..+...+... .+.
T Consensus 1 Svvip~~n~~-----~~l~~~l~sl~~q--~-~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~-~n~------- 64 (169)
T PF00535_consen 1 SVVIPTYNEA-----EYLERTLESLLKQ--T-DPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNP-ENL------- 64 (169)
T ss_dssp EEEEEESS-T-----TTHHHHHHHHHHH--S-GCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHC-CCS-------
T ss_pred CEEEEeeCCH-----HHHHHHHHHHhhc--c-CCCEEEEEecccccccccccccccccccccccccccc-ccc-------
Confidence 5888888883 2377788888642 1 1223444443322 567777765 3333333221 111
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCceEEEecceEEeccCCccCc
Q 016761 182 TPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRF 223 (383)
Q Consensus 182 S~~f~~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlRNP~p~f 223 (383)
.....+...+..+ .|-=+++.|.|.+|..+=+..+
T Consensus 65 -----g~~~~~n~~~~~a--~~~~i~~ld~D~~~~~~~l~~l 99 (169)
T PF00535_consen 65 -----GFSAARNRGIKHA--KGEYILFLDDDDIISPDWLEEL 99 (169)
T ss_dssp -----HHHHHHHHHHHH----SSEEEEEETTEEE-TTHHHHH
T ss_pred -----ccccccccccccc--ceeEEEEeCCCceEcHHHHHHH
Confidence 1112233333332 3336999999999988744333
No 36
>PLN02331 phosphoribosylglycinamide formyltransferase
Probab=20.35 E-value=5.5e+02 Score=24.10 Aligned_cols=54 Identities=6% Similarity=-0.074 Sum_probs=33.0
Q ss_pred eEEEEEcCccccCCChhHHHHHHhhhhccCcccccccEEEEEecH--HHHHHHHhcCccEEEeec
Q 016761 107 TVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQ--KAFERCLTLHRHCFALIT 169 (383)
Q Consensus 107 tVIlT~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvAlD~--~a~~~c~~~g~~c~~~~~ 169 (383)
.+|+...|..- +...++.++.+.- -.+-++|++-.+ .+.++|++.|++++..+.
T Consensus 2 i~vl~Sg~Gsn------~~al~~~~~~~~l---~~~i~~visn~~~~~~~~~A~~~gIp~~~~~~ 57 (207)
T PLN02331 2 LAVFVSGGGSN------FRAIHDACLDGRV---NGDVVVVVTNKPGCGGAEYARENGIPVLVYPK 57 (207)
T ss_pred EEEEEeCCChh------HHHHHHHHHcCCC---CeEEEEEEEeCCCChHHHHHHHhCCCEEEecc
Confidence 45566655443 5556666654421 123456666644 447999999999987643
No 37
>COG2312 Erythromycin esterase homolog [General function prediction only]
Probab=20.23 E-value=83 Score=32.76 Aligned_cols=89 Identities=18% Similarity=0.240 Sum_probs=49.2
Q ss_pred cccccHHHHHHHHHHHHHHHHHHH-cCceEEEecceEEeccCCccCcCCCCCeeEeccCCCCCCCCCCCCCceEEEEEee
Q 016761 178 AYFMTPQYLKMMWKRIDFLRTVLE-MGYNFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKS 256 (383)
Q Consensus 178 ~~~gS~~f~~m~w~K~~~l~~vL~-lGy~VLfsDvDVVWlRNP~p~f~~~aDi~issD~~~g~~~~~~~~~NtGf~yvRs 256 (383)
...|+..|.+. |..+++.+.+ +||.+|-..+|. .|.+-..+...|...++...++ ||+|.=-
T Consensus 53 ~sHGt~e~~~~---k~rm~r~Lvee~Gf~~iA~EA~~-------------~d~~av~~Yv~~~~~d~~~~~~-~~~~~~W 115 (405)
T COG2312 53 PSHGTGEFFAF---KARMFRALVEELGFRAIAFEADF-------------PDAQAVNRYVRGGGDDLREAMD-GFIFWVW 115 (405)
T ss_pred CCCCccHHHHH---HHHHHHHHHHHhCcceEEeccCc-------------HHHHHHHHHHhccCCChHHHHh-ccchhhh
Confidence 34566666665 8888888775 999999988885 1222111112233334444444 6665544
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCChHHH
Q 016761 257 NNRSIEFYRFWYASRETYPGYHDQDVL 283 (383)
Q Consensus 257 t~~ti~f~~~W~~~~~~~p~~~DQ~vf 283 (383)
+...+.=+-.|+......-..-+|.-|
T Consensus 116 r~~~v~~lv~wlr~~na~r~~~~~~~f 142 (405)
T COG2312 116 RRAEVRDLVEWLREFNAARSAGPQVGF 142 (405)
T ss_pred hHHHHHHHHHHHHHHhccCCcccccce
Confidence 444555555686654443223455533
Done!