Query 016763
Match_columns 383
No_of_seqs 31 out of 33
Neff 2.2
Searched_HMMs 13730
Date Mon Mar 25 03:23:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016763.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016763hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q4ra_ d.58.4.4 (A:) Hypothet 17.1 62 0.0045 22.8 3.8 32 26-57 17-48 (103)
2 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 16.5 25 0.0018 24.6 1.3 36 87-128 17-52 (59)
3 d1wi9a_ a.4.5.47 (A:) Hypothet 13.5 34 0.0025 25.2 1.5 21 27-52 34-54 (72)
4 d2jpqa1 a.284.1.1 (A:1-75) Hyp 13.1 1E+02 0.0073 22.8 4.0 27 102-128 32-69 (75)
5 d2jrxa1 a.284.1.1 (A:1-75) Unc 10.7 1.3E+02 0.0092 22.2 3.9 27 102-128 32-69 (75)
6 d1pzra_ a.38.2.1 (A:) Erythron 10.0 90 0.0066 22.0 2.7 22 20-41 36-57 (60)
7 d1z0jb1 a.2.19.1 (B:734-784) F 9.9 70 0.0051 22.1 2.0 19 25-43 26-44 (51)
8 d1he1a_ a.24.11.1 (A:) ExoS to 8.2 1.2E+02 0.0088 24.4 3.2 26 17-42 105-130 (135)
9 d1g4us1 a.24.11.1 (S:167-296) 7.6 1.3E+02 0.0092 24.2 3.0 27 16-42 95-121 (130)
10 d1ecwa_ a.61.1.1 (A:) SIV matr 7.0 1.2E+02 0.0084 23.9 2.4 22 15-37 40-61 (114)
No 1
>d1q4ra_ d.58.4.4 (A:) Hypothetical protein AT3G17210.1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=17.09 E-value=62 Score=22.77 Aligned_cols=32 Identities=13% Similarity=0.131 Sum_probs=25.9
Q ss_pred hhHHHHHHHhHhhhhhhcCCceeeeeeecCcc
Q 016763 26 KKVDKCMARLQELQYTVTGGTKMISGVSLSPR 57 (383)
Q Consensus 26 ~kvd~cmaRLQeLQ~Tvagg~kvvsgvsLSpr 57 (383)
..+++-++.|++|+..+-|-..+-.|.+++|.
T Consensus 17 ~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~ 48 (103)
T d1q4ra_ 17 EKIEELIKGYANLVNLIEPMKAFHWGKDVSIE 48 (103)
T ss_dssp HHHHHHHHHHHTHHHHCTTCCEEEEEECCCSS
T ss_pred HHHHHHHHHHHHhhhhCceeEEEEeccccCCc
Confidence 45677788888899999998888889888864
No 2
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.47 E-value=25 Score=24.57 Aligned_cols=36 Identities=28% Similarity=0.579 Sum_probs=26.2
Q ss_pred CCCCCCCCcccccCccchHHHhhHHHHHHHHhhHHHHHHHHh
Q 016763 87 GKFPAPAGGEWRGMSLPAMLVGETVGEILQATQFAREIVAAV 128 (383)
Q Consensus 87 ~kf~~~~~geWr~mSlPAmlvgetv~EIlqASqFareIv~av 128 (383)
-+||+++..-|..+ |-.||.|+.|++.- +++|.+.+
T Consensus 17 ~~~P~gt~~RW~~I---A~~vgkt~~ev~~~---~k~l~e~~ 52 (59)
T d2cqqa1 17 VKFPGGTPGRWEKI---AHELGRSVTDVTTK---AKQLKDSV 52 (59)
T ss_dssp HHSCTTCTTHHHHH---HHHHTSCHHHHHHH---HHHHHHSC
T ss_pred HHCCCCCcHHHHHH---HHHHCCCHHHHHHH---HHHHHHhc
Confidence 47998888788877 55569999998864 34555554
No 3
>d1wi9a_ a.4.5.47 (A:) Hypothetical protein C20orf116 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=13.53 E-value=34 Score=25.24 Aligned_cols=21 Identities=24% Similarity=0.520 Sum_probs=16.6
Q ss_pred hHHHHHHHhHhhhhhhcCCceeeeee
Q 016763 27 KVDKCMARLQELQYTVTGGTKMISGV 52 (383)
Q Consensus 27 kvd~cmaRLQeLQ~Tvagg~kvvsgv 52 (383)
+-+.|..|+|||+-. ..|+||
T Consensus 34 ktqd~i~RIq~Le~~-----g~ltGV 54 (72)
T d1wi9a_ 34 RTQDAINRIQDLLTE-----GTLTGV 54 (72)
T ss_dssp CHHHHHHHHHHHHHH-----SSSCEE
T ss_pred cHHHHHHHHHHHHHC-----CCeeeE
Confidence 567899999999975 447776
No 4
>d2jpqa1 a.284.1.1 (A:1-75) Hypothetical protein VP2129 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=13.11 E-value=1e+02 Score=22.81 Aligned_cols=27 Identities=26% Similarity=0.591 Sum_probs=21.6
Q ss_pred cchHHHhhHHHHHHH-----------HhhHHHHHHHHh
Q 016763 102 LPAMLVGETVGEILQ-----------ATQFAREIVAAV 128 (383)
Q Consensus 102 lPAmlvgetv~EIlq-----------ASqFareIv~av 128 (383)
|--|.+|..|-.||. |.+||.-+...|
T Consensus 32 LSLMvLGN~vTniln~~V~~~qR~~iAe~Fa~AL~~Sv 69 (75)
T d2jpqa1 32 LTLMIAGNIATNVLNQRVAASQRKLIAEKFAQALMSSL 69 (75)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Confidence 445999999999986 667887777777
No 5
>d2jrxa1 a.284.1.1 (A:1-75) Uncharacterized protein YejL {Escherichia coli [TaxId: 562]}
Probab=10.65 E-value=1.3e+02 Score=22.19 Aligned_cols=27 Identities=30% Similarity=0.634 Sum_probs=22.2
Q ss_pred cchHHHhhHHHHHHH-----------HhhHHHHHHHHh
Q 016763 102 LPAMLVGETVGEILQ-----------ATQFAREIVAAV 128 (383)
Q Consensus 102 lPAmlvgetv~EIlq-----------ASqFareIv~av 128 (383)
|--|.+|..|-.||. |.+||.-+...|
T Consensus 32 LSLMvLGN~vTniln~~V~~~qR~~iAe~Fa~AL~~Sv 69 (75)
T d2jrxa1 32 LSLMVLGNMVTNLINTSIAPAQRQAIANSFARALQSSI 69 (75)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Confidence 445999999999996 678888888777
No 6
>d1pzra_ a.38.2.1 (A:) Erythronolide synthase {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=9.99 E-value=90 Score=22.03 Aligned_cols=22 Identities=36% Similarity=0.570 Sum_probs=20.1
Q ss_pred HHHHhHhhHHHHHHHhHhhhhh
Q 016763 20 LLRETVKKVDKCMARLQELQYT 41 (383)
Q Consensus 20 l~ret~~kvd~cmaRLQeLQ~T 41 (383)
.|+.|+-++|-+-+||.|..|.
T Consensus 36 YLkRTv~eLdsVtaRLrEvEyR 57 (60)
T d1pzra_ 36 YLKRTVTELDSVTARLREVEHR 57 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 5788999999999999999986
No 7
>d1z0jb1 a.2.19.1 (B:734-784) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.89 E-value=70 Score=22.09 Aligned_cols=19 Identities=26% Similarity=0.412 Sum_probs=15.8
Q ss_pred HhhHHHHHHHhHhhhhhhc
Q 016763 25 VKKVDKCMARLQELQYTVT 43 (383)
Q Consensus 25 ~~kvd~cmaRLQeLQ~Tva 43 (383)
+.+|+-.-.-|.|||+|.+
T Consensus 26 ~deve~ltenl~elk~tl~ 44 (51)
T d1z0jb1 26 LDEVEVLTENLRELKHTLA 44 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 5677778889999999976
No 8
>d1he1a_ a.24.11.1 (A:) ExoS toxin {Pseudomonas aeruginosa [TaxId: 287]}
Probab=8.20 E-value=1.2e+02 Score=24.43 Aligned_cols=26 Identities=27% Similarity=0.439 Sum_probs=24.2
Q ss_pred chHHHHHhHhhHHHHHHHhHhhhhhh
Q 016763 17 NPVLLRETVKKVDKCMARLQELQYTV 42 (383)
Q Consensus 17 Np~l~ret~~kvd~cmaRLQeLQ~Tv 42 (383)
-|.+++|-.+++...|+.++.||+-|
T Consensus 105 s~e~l~~~~~qlh~l~~eva~l~~av 130 (135)
T d1he1a_ 105 SPELRREITDQLHQVMSEVALLRQAV 130 (135)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999999999976
No 9
>d1g4us1 a.24.11.1 (S:167-296) SptP tyrosine phosphatase {Salmonella typhimurium [TaxId: 90371]}
Probab=7.59 E-value=1.3e+02 Score=24.18 Aligned_cols=27 Identities=19% Similarity=0.231 Sum_probs=24.6
Q ss_pred cchHHHHHhHhhHHHHHHHhHhhhhhh
Q 016763 16 LNPVLLRETVKKVDKCMARLQELQYTV 42 (383)
Q Consensus 16 LNp~l~ret~~kvd~cmaRLQeLQ~Tv 42 (383)
--|.+++|-++++...|..+..||+-|
T Consensus 95 AS~e~l~ea~~~Lh~~~~eva~l~~~v 121 (130)
T d1g4us1 95 ASTHELTQAVKKIHVIAKELKNVTAEL 121 (130)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358899999999999999999999975
No 10
>d1ecwa_ a.61.1.1 (A:) SIV matrix antigen {Simian immunodeficiency virus [TaxId: 11723]}
Probab=6.99 E-value=1.2e+02 Score=23.92 Aligned_cols=22 Identities=27% Similarity=0.294 Sum_probs=14.5
Q ss_pred CcchHHHHHhHhhHHHHHHHhHh
Q 016763 15 PLNPVLLRETVKKVDKCMARLQE 37 (383)
Q Consensus 15 ~LNp~l~ret~~kvd~cmaRLQe 37 (383)
+|||.|| ||-.-..|-|..||-
T Consensus 40 alnp~LL-eT~eGC~qIl~qlqP 61 (114)
T d1ecwa_ 40 GLAESLL-ENKEGCQKILSVLAP 61 (114)
T ss_dssp TCCGGGG-GSHHHHHHHHHHHGG
T ss_pred cCCchhh-hcHHHHHHHHHHhCc
Confidence 7999987 566555555555543
Done!