Query 016764
Match_columns 383
No_of_seqs 183 out of 1581
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 03:24:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016764.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016764hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tyza_ c.79.1.1 (A:) 1-aminoc 4.9 1.9E+02 0.014 23.4 2.9 45 28-79 2-48 (338)
2 d2oara1 f.16.1.1 (A:10-118) Ga 4.3 6.2E+02 0.045 18.1 7.3 29 223-251 2-37 (109)
3 d1wuwa_ g.13.1.1 (A:) Hordothi 4.1 1.3E+02 0.0096 18.8 0.8 11 41-51 35-45 (45)
4 d1r1ga_ g.3.7.2 (A:) Neurotoxi 3.8 87 0.0063 17.6 -0.3 7 39-45 16-22 (31)
5 d2nwwa1 f.49.1.1 (A:12-416) Pr 3.7 7E+02 0.051 21.4 6.2 23 327-349 73-95 (405)
6 d2e74d2 f.23.12.1 (D:12-45) IS 3.7 3.1E+02 0.022 15.7 2.2 20 108-127 8-27 (34)
7 d1m6ex_ c.66.1.35 (X:) Salicyl 3.2 3.8E+02 0.027 23.5 3.6 25 30-55 133-157 (359)
8 d1l4db_ d.15.5.1 (B:) Streptok 3.1 4.3E+02 0.031 19.3 3.1 48 5-52 52-105 (122)
9 d1ppjg_ f.23.13.1 (G:) Ubiquin 3.1 5.7E+02 0.042 17.2 3.7 26 269-294 45-70 (75)
10 d2h4oa1 d.368.1.1 (A:2-63) Unc 2.9 1.5E+02 0.011 19.0 0.1 19 10-28 36-54 (62)
No 1
>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Pseudomonas sp., strain ACP [TaxId: 306]}
Probab=4.93 E-value=1.9e+02 Score=23.42 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=28.1
Q ss_pred cccccCCCCCcccccCccccccccccCCc--cccCCCCcccccccccCCCCCCC
Q 016764 28 NIPVLPRNRSLSFSTSWCPVHFRSISHSN--LKFGSSRNFVTNSVSENISGPFD 79 (383)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 79 (383)
|+..|||=+ .--+.|| ..+-|+ ...|...++|.|+-..+.++||.
T Consensus 2 ~~~~~~r~~---l~~g~TP----L~~~~~L~~~lg~~~~i~~K~E~~~ptgS~~ 48 (338)
T d1tyza_ 2 NLQRFPRYP---LTFGPTP----IQPLARLSKHLGGKVHLYAKREDCNSGLAFG 48 (338)
T ss_dssp CGGGSCCCC---CSSSSCC----EEECHHHHHHTTSSSEEEEEEGGGSCSSTTC
T ss_pred CcccCCccc---cCCCCCc----eeEhHHHHHHHCCCCEEEEEECCCCCCcccc
Confidence 456677733 3334444 333333 22356679999999998889986
No 2
>d2oara1 f.16.1.1 (A:10-118) Gated mechanosensitive channel {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=4.33 E-value=6.2e+02 Score=18.09 Aligned_cols=29 Identities=17% Similarity=0.351 Sum_probs=17.1
Q ss_pred CCCCchhHHH-------HHHHHHHHHHHHHHHHHHH
Q 016764 223 DPPLAPLSIV-------MTSLSTATAVFVTPLLSLL 251 (383)
Q Consensus 223 gGd~~~Lal~-------lt~istlla~~~~Pl~l~l 251 (383)
+||+..+|+. ...++++..=+++|+.-.+
T Consensus 2 rGNVidLAVgvIiG~AF~~iV~slV~diimPlIg~i 37 (109)
T d2oara1 2 RGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRI 37 (109)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhcchHhhc
Confidence 5555444443 3456666666788886554
No 3
>d1wuwa_ g.13.1.1 (A:) Hordothionin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=4.05 E-value=1.3e+02 Score=18.80 Aligned_cols=11 Identities=36% Similarity=0.595 Sum_probs=8.7
Q ss_pred ccCcccccccc
Q 016764 41 STSWCPVHFRS 51 (383)
Q Consensus 41 ~~~~~~~~~~~ 51 (383)
|.++||-+||.
T Consensus 35 s~~~CP~dyPk 45 (45)
T d1wuwa_ 35 SGLKCPSSFPK 45 (45)
T ss_dssp SSSSCCTTSCC
T ss_pred cCCcCCCCCCC
Confidence 55889998884
No 4
>d1r1ga_ g.3.7.2 (A:) Neurotoxin bmk37 {Chinese scorpion (Buthus martensi karsch) [TaxId: 34649]}
Probab=3.78 E-value=87 Score=17.61 Aligned_cols=7 Identities=43% Similarity=0.928 Sum_probs=5.0
Q ss_pred ccccCcc
Q 016764 39 SFSTSWC 45 (383)
Q Consensus 39 ~~~~~~~ 45 (383)
-|||++|
T Consensus 16 gfssgkc 22 (31)
T d1r1ga_ 16 GFSSGKC 22 (31)
T ss_dssp TCSEEEE
T ss_pred ecccCcE
Confidence 4787776
No 5
>d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]}
Probab=3.71 E-value=7e+02 Score=21.39 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016764 327 TILLLIITFHLSAFVAGYVVTGL 349 (383)
Q Consensus 327 ~i~l~~~ll~~~gf~lG~llar~ 349 (383)
..+........++..+|+.++..
T Consensus 73 ~ti~~~l~tt~iA~~igl~~~~~ 95 (405)
T d2nwwa1 73 KIVVYYLLTSAFAVTLGIIMARL 95 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555566666777777754
No 6
>d2e74d2 f.23.12.1 (D:12-45) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Mastigocladus laminosus [TaxId: 83541]}
Probab=3.68 E-value=3.1e+02 Score=15.73 Aligned_cols=20 Identities=15% Similarity=0.293 Sum_probs=13.1
Q ss_pred hhHHHHHHHHHHHHHhccCc
Q 016764 108 NSFLPHVVLGSTMLALVFPP 127 (383)
Q Consensus 108 ~~~l~~~vl~~~~lGl~~P~ 127 (383)
-+.+.+..+.++.+|.++|-
T Consensus 8 mnlltfgt~tg~alg~lypv 27 (34)
T d2e74d2 8 MNLLAFGTVTGVALGALYPL 27 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHhhhhhH
Confidence 34455566777788877764
No 7
>d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]}
Probab=3.21 E-value=3.8e+02 Score=23.53 Aligned_cols=25 Identities=28% Similarity=0.329 Sum_probs=18.9
Q ss_pred cccCCCCCcccccCccccccccccCC
Q 016764 30 PVLPRNRSLSFSTSWCPVHFRSISHS 55 (383)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 (383)
+.||+|| +.|--+.+++|+=+..|.
T Consensus 133 rLfP~~S-lh~~~Ss~alHWLS~vP~ 157 (359)
T d1m6ex_ 133 RLFPRNT-LHFIHSSYSLMWLSQVPI 157 (359)
T ss_dssp CCSCTTC-BSCEEEESCTTBCSSCCS
T ss_pred hcCCCCc-eEEeeehhhhhhhhcCCc
Confidence 6788886 778778888888776654
No 8
>d1l4db_ d.15.5.1 (B:) Streptokinase {Streptococcus equisimilis [TaxId: 119602]}
Probab=3.14 E-value=4.3e+02 Score=19.30 Aligned_cols=48 Identities=19% Similarity=0.261 Sum_probs=30.2
Q ss_pred hhhHHHHhhh----cccce--eEEEeecccccccCCCCCcccccCccccccccc
Q 016764 5 ANMLQAQRSR----FNSKT--FSLTISKHNIPVLPRNRSLSFSTSWCPVHFRSI 52 (383)
Q Consensus 5 ~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 52 (383)
|..|||-|.| +.++. |.+-=-...-...-||..+-|-+..-||.+|.-
T Consensus 52 adLLkAI~~rli~~~~~~d~~~e~iDFA~DA~itdr~~~lyfA~~d~SVtL~~q 105 (122)
T d1l4db_ 52 ADLLKAIQEQLIANVHSNDDYFEVIDFASDATITDRNGKVYFADKDGSVTLPTQ 105 (122)
T ss_dssp HHHHHHHHHHHHHSCCSSSCCEEEEEECTTCEEEETTCCEECCCTTSEEECCSS
T ss_pred HHHHHHHHHHHHHHHHccCCeEEEEEeccCceeecccCcEEEecCCCceecCcc
Confidence 5678888776 44555 433222233344567777888887778888753
No 9
>d1ppjg_ f.23.13.1 (G:) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=3.12 E-value=5.7e+02 Score=17.24 Aligned_cols=26 Identities=15% Similarity=0.111 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhh
Q 016764 269 LQIVVVPIAAGLLLNRFFPRICNAIR 294 (383)
Q Consensus 269 ll~VllPl~lG~llr~~~p~~~~~i~ 294 (383)
++.++.|++++.++-.|-.+..++.+
T Consensus 45 ~l~v~PPfi~~Y~iy~W~~~~~~~~~ 70 (75)
T d1ppjg_ 45 ILRVAPPFVAFYLVYTWGTQEFEKSK 70 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEcCHHHHHHHHHHHHHHHHHHHh
Confidence 57889999999999988665444443
No 10
>d2h4oa1 d.368.1.1 (A:2-63) Uncharacterized protein YonK {Bacillus subtilis [TaxId: 1423]}
Probab=2.91 E-value=1.5e+02 Score=19.05 Aligned_cols=19 Identities=37% Similarity=0.520 Sum_probs=14.9
Q ss_pred HHhhhcccceeEEEeeccc
Q 016764 10 AQRSRFNSKTFSLTISKHN 28 (383)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~ 28 (383)
.--|.||.|..|+|....|
T Consensus 36 eilsefngknvsitvkeen 54 (62)
T d2h4oa1 36 EILSEFNGKNVSITVKEEN 54 (62)
T ss_dssp HHHHTTTTSCCCCCCCCCC
T ss_pred HHHHHhCCCeeEEEeeccc
Confidence 4468999999999886654
Done!