Query 016765
Match_columns 383
No_of_seqs 233 out of 1392
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 03:25:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016765.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016765hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.1E-47 3.7E-52 380.1 17.0 290 1-294 55-398 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 3.8E-45 1.3E-49 361.4 19.2 288 1-299 56-397 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 7.4E-44 2.5E-48 349.7 20.5 287 3-295 43-373 (381)
4 1tzs_A Cathepsin E; hydrolase, 100.0 1.5E-43 5.1E-48 343.8 20.6 251 21-298 78-345 (351)
5 1j71_A Candidapepsin, aspartic 100.0 1.1E-43 3.7E-48 342.6 18.5 242 21-299 76-328 (334)
6 2x0b_A Renin; hydrolase-hormon 100.0 7.3E-44 2.5E-48 349.2 15.4 247 21-295 118-383 (383)
7 2qzx_A Candidapepsin-5; aspart 100.0 2.4E-43 8.1E-48 341.2 17.6 249 21-301 76-337 (342)
8 3psg_A Pepsinogen; hydrolase(a 100.0 1.3E-43 4.4E-48 346.4 15.7 245 21-295 111-370 (370)
9 3pvk_A Candidapepsin-2; hydrol 100.0 3E-43 1E-47 340.4 18.1 249 22-301 77-337 (342)
10 3fv3_A SAPP1P-secreted asparti 100.0 3E-43 1E-47 340.0 17.8 246 22-300 71-334 (339)
11 3cms_A Chymosin B; hydrolase, 100.0 4.5E-43 1.5E-47 336.7 17.3 244 21-295 69-323 (323)
12 4aa9_A Chymosin; hydrolase, as 100.0 8.8E-43 3E-47 334.1 17.1 243 22-295 67-320 (320)
13 1dpj_A Proteinase A; proteinas 100.0 3.2E-42 1.1E-46 331.6 20.1 244 21-295 68-329 (329)
14 1mpp_A Pepsin; hydrolase(acid 100.0 1.1E-42 3.9E-47 338.9 16.6 252 22-299 75-359 (361)
15 3k1w_A Renin; protease, altern 100.0 9.9E-43 3.4E-47 336.6 15.5 247 21-295 75-340 (341)
16 1am5_A Pepsin, acid proteinase 100.0 2.1E-42 7.3E-47 332.1 17.3 243 21-295 67-324 (324)
17 1htr_B Gastricsin; aspartyl pr 100.0 2.8E-42 9.5E-47 332.0 17.0 246 21-295 67-329 (329)
18 1miq_A Plasmepsin; aspartic pr 100.0 3.2E-42 1.1E-46 337.2 17.0 243 21-295 117-374 (375)
19 2apr_A Rhizopuspepsin; hydrola 100.0 7.9E-42 2.7E-46 328.3 18.8 242 21-294 69-323 (325)
20 3c9x_A Trichoderma reesei aspa 100.0 6.4E-42 2.2E-46 329.5 16.5 244 21-294 71-329 (329)
21 1oew_A Endothiapepsin; hydrola 100.0 4.7E-42 1.6E-46 330.4 15.1 242 22-294 71-329 (329)
22 1yg9_A Aspartic protease BLA G 100.0 6.2E-42 2.1E-46 329.7 15.9 245 22-295 72-329 (330)
23 1qdm_A Prophytepsin; aspartic 100.0 8.6E-42 2.9E-46 343.3 17.0 264 21-294 108-477 (478)
24 3qvc_A Histo-aspartic protease 100.0 2.1E-41 7.2E-46 337.8 14.7 243 21-295 192-449 (451)
25 1ibq_A Aspergillopepsin; aspar 100.0 4E-41 1.4E-45 323.4 16.1 243 21-294 66-324 (325)
26 3lpj_A Beta-secretase 1; alzhe 100.0 6.5E-41 2.2E-45 336.0 17.8 273 21-300 125-425 (455)
27 3vf3_A Beta-secretase 1; struc 100.0 1.5E-40 5.1E-45 328.4 20.1 271 21-300 79-379 (402)
28 2ewy_A Beta-secretase 2; BACE2 100.0 9.1E-41 3.1E-45 327.9 17.7 270 22-299 65-359 (383)
29 2qp8_A Beta-secretase 1; BACE1 100.0 1.8E-40 6.1E-45 327.1 19.6 270 22-299 73-371 (395)
30 1izd_A Aspartic proteinase; su 100.0 1.5E-40 5.2E-45 319.1 16.2 241 21-294 67-322 (323)
31 1bxo_A Protein (penicillopepsi 100.0 1.5E-40 5.3E-45 319.1 15.1 240 21-294 67-322 (323)
32 1wkr_A Polyporopepsin; hydrola 100.0 2.9E-40 1E-44 319.3 16.6 263 6-299 38-337 (340)
33 2bju_A Plasmepsin II; aspartic 100.0 9.8E-41 3.4E-45 332.7 12.4 243 21-295 193-450 (453)
34 1lya_B Cathepsin D; lysosomal 100.0 3E-39 1E-43 297.4 17.4 222 52-295 3-241 (241)
35 1b5f_A Protein (cardosin A); h 99.9 1.3E-27 4.4E-32 219.5 11.5 162 22-191 70-238 (239)
36 1b5f_B Protein (cardosin A); h 99.7 2.3E-17 7.8E-22 127.0 4.2 76 217-294 6-86 (87)
37 1lya_A Cathepsin D; lysosomal 96.6 0.0013 4.6E-08 50.6 3.6 27 21-48 70-96 (97)
38 3s8i_A Protein DDI1 homolog 1; 94.8 0.019 6.6E-07 47.6 3.5 114 136-294 22-135 (148)
39 2i1a_A DNA damage-inducible pr 93.8 0.07 2.4E-06 43.9 5.0 28 266-293 108-135 (148)
40 2pmp_A 2-C-methyl-D-erythritol 62.9 9 0.00031 31.6 4.6 41 341-383 90-130 (160)
41 3re3_A 2-C-methyl-D-erythritol 62.7 8.1 0.00028 32.0 4.3 41 341-383 93-133 (162)
42 1t0a_A 2C-methyl-D-erythritol 62.5 10 0.00034 31.3 4.8 41 341-383 89-129 (159)
43 1gx1_A 2-C-methyl-D-erythritol 60.6 10 0.00035 31.3 4.5 41 341-383 88-128 (160)
44 3f0d_A 2-C-methyl-D-erythritol 60.0 11 0.00036 31.9 4.6 41 341-383 110-150 (183)
45 3b6n_A 2-C-methyl-D-erythritol 54.6 11 0.00039 31.8 3.9 41 341-383 115-155 (187)
46 1iv3_A 2-C-methyl-D-erythritol 50.6 16 0.00054 29.9 4.1 41 341-383 87-127 (152)
47 1lya_A Cathepsin D; lysosomal 44.0 21 0.00072 26.6 3.7 16 165-180 29-44 (97)
48 1w55_A ISPD/ISPF bifunctional 30.8 49 0.0017 31.2 4.7 41 341-383 296-336 (371)
49 3ghp_A Cellulosomal scaffoldin 28.2 28 0.00097 29.8 2.2 17 266-289 144-160 (227)
50 2eq7_C 2-oxoglutarate dehydrog 26.2 33 0.0011 20.7 1.8 17 367-383 4-20 (40)
51 3slz_A GAG-Pro-POL polyprotein 23.3 51 0.0018 26.2 2.8 26 143-179 24-49 (132)
52 2eq9_C Pyruvate dehydrogenase 23.3 34 0.0012 20.8 1.4 17 367-383 5-21 (41)
53 3rnm_E Lipoamide acyltransfera 23.2 31 0.0011 23.2 1.3 20 364-383 9-28 (58)
54 2hs1_A HIV-1 protease; ultra-h 22.9 58 0.002 24.5 2.9 30 139-179 6-35 (99)
55 2uzh_A 2C-methyl-D-erythritol 22.8 1.2E+02 0.0042 24.9 5.1 37 341-379 92-128 (165)
56 1fmb_A EIAV protease; hydrolas 22.7 62 0.0021 24.5 3.1 34 139-183 6-39 (104)
57 2eq8_C Pyruvate dehydrogenase 22.4 36 0.0012 20.5 1.4 17 367-383 4-20 (40)
58 1bxo_A Protein (penicillopepsi 22.3 69 0.0023 29.1 4.0 31 136-180 14-44 (323)
59 1nu0_A Hypothetical protein YQ 21.9 54 0.0018 26.2 2.7 21 275-295 1-21 (138)
60 3ec0_A Protease; HIV-2, inhibi 21.8 58 0.002 24.5 2.7 30 138-178 5-34 (99)
61 1izd_A Aspartic proteinase; su 21.2 74 0.0025 28.9 4.0 32 136-181 14-45 (323)
62 1ywx_A 30S ribosomal protein S 20.4 84 0.0029 23.7 3.3 31 353-383 20-50 (102)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.1e-47 Score=380.10 Aligned_cols=290 Identities=22% Similarity=0.407 Sum_probs=229.5
Q ss_pred CCCccccccCCC-CC------CC---CC------CCCCceeEEEe-CCCCeEEEEEEEEEEEeCCCC------CCCCccE
Q 016765 1 MSNTYQALKCNP-DC------NC---DN------DRKECIYERRY-AEMSTSSGVLGVDVISFGNES------ELVPQRA 57 (383)
Q Consensus 1 ~Sst~~~~~C~~-~c------~C---~~------~~~~C~~~i~Y-~~g~~~~G~~~~D~v~l~~~~------~~~~~~~ 57 (383)
+||||++++|.+ .| +| .+ .++.|.|.+.| .+++.+.|++++|+|+|++.. .++++++
T Consensus 55 ~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~ 134 (413)
T 3vla_A 55 VSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRF 134 (413)
T ss_dssp CCTTCEECBTTSHHHHHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEE
T ss_pred CCCCcCccCCCcccccccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCE
Confidence 599999999996 35 23 21 14579999999 588888999999999997421 1467889
Q ss_pred EEEeeEccCCCCcCCCcceEeecCCCCCchHHHhHhcCCCCCceEEeecCCCCCCCceeeCCCCCCC--------C-cee
Q 016765 58 VFGCENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP--------D-MVF 128 (383)
Q Consensus 58 ~fG~~~~~s~~~~~~~~dGIlGLg~~~~S~~~~L~~~g~I~~~FSl~l~~~~~~~G~l~fGg~d~~~--------~-~~~ 128 (383)
.|||++.+........+|||||||++.+|++.||.++++|+++||+||.+....+|.|+||+.|..+ . +.|
T Consensus 135 ~FGc~~~~~~~g~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~ 214 (413)
T 3vla_A 135 IFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTY 214 (413)
T ss_dssp EEEEECGGGGTTSCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEE
T ss_pred EEECcccccccCcccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeE
Confidence 9999998742222346899999999999999999999999899999999865678999999998631 3 566
Q ss_pred eecCCCC------------CCceeEEEeEEEECCEEeeeCCceec----CCCceEEecccceeeeCHHHHHHHHHHHHHH
Q 016765 129 SHSDPFR------------SPYYNIELKELRVAGKPLKVSPRIFD----GGHGTVLDSGTTYAYLPGHAFAAFKDALIKE 192 (383)
Q Consensus 129 ~~~~~~~------------~~~w~v~l~~i~v~~~~~~~~~~~~~----~~~~~ivDSGts~~~lP~~~~~~i~~~i~~~ 192 (383)
+++.... ..+|.|+|++|.||++.+.+++..|. ++..+||||||++++||+++|++|.++|.++
T Consensus 215 tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~ 294 (413)
T 3vla_A 215 TPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKE 294 (413)
T ss_dssp EECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHH
T ss_pred eecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHH
Confidence 6654321 26999999999999999988766553 3578999999999999999999999999988
Q ss_pred cc--ccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECC-CeEEEEcCCceEEEecccCCeEEEEEEeCC---CC
Q 016765 193 TH--VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGN-GQKLTLSPENYLFRHMKVSGAYCLGIFQNS---DS 266 (383)
Q Consensus 193 ~~--~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~-g~~~~l~p~~yi~~~~~~~~~~Cl~~~~~~---~~ 266 (383)
+. .+++..+ ...+..||+.....-...+..+|+|+|+|++ +++|.|++++|+++... +.+|+++.... .+
T Consensus 295 ~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~ 370 (413)
T 3vla_A 295 SAARNITRVAS--VAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRT 370 (413)
T ss_dssp HHHTTCCEECC--CTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSS
T ss_pred hcccCCCcCCC--CCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCccc
Confidence 64 3333321 2346789875432211234589999999964 48999999999998653 67999887654 26
Q ss_pred CeeeccEEEEeEEEEEECCCCEEEEecC
Q 016765 267 TTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (383)
Q Consensus 267 ~~ILG~~Flr~~yvvFD~~~~rIGfa~~ 294 (383)
.||||+.|||++|+|||++++|||||++
T Consensus 371 ~~IlGd~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 371 SIVIGGHQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp SEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence 8999999999999999999999999985
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=3.8e-45 Score=361.36 Aligned_cols=288 Identities=22% Similarity=0.442 Sum_probs=217.8
Q ss_pred CCCccccccCCC-CC---------CCCCC------CCCceeEEEeC-CCCeEEEEEEEEEEEeCCCC--C------CCCc
Q 016765 1 MSNTYQALKCNP-DC---------NCDND------RKECIYERRYA-EMSTSSGVLGVDVISFGNES--E------LVPQ 55 (383)
Q Consensus 1 ~Sst~~~~~C~~-~c---------~C~~~------~~~C~~~i~Y~-~g~~~~G~~~~D~v~l~~~~--~------~~~~ 55 (383)
+||||++++|.+ .| .|.++ ++.|+|.+.|+ +++.+.|.+++|+|+|++.. . ++++
T Consensus 56 ~Sst~~~~~C~s~~C~~~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~ 135 (403)
T 3aup_A 56 SSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVP 135 (403)
T ss_dssp CCSSCBCCCTTBHHHHHTTCCCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEE
T ss_pred CCCCCCccCCCCccccCccccCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCcccccccccccc
Confidence 589999999985 24 13222 35899999998 78889999999999998731 1 4678
Q ss_pred cEEEEeeEccCCC-CcCCCcceEeecCCCCCchHHHhHhcCCCCCceEEeecCCCCCCCceeeCCCCCCC----------
Q 016765 56 RAVFGCENLETGD-LYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP---------- 124 (383)
Q Consensus 56 ~~~fG~~~~~s~~-~~~~~~dGIlGLg~~~~S~~~~L~~~g~I~~~FSl~l~~~~~~~G~l~fGg~d~~~---------- 124 (383)
++.|||++.++.. +....+|||||||++.++++.||.++.+.+++||+||.+....+|.|+||| |+.+
T Consensus 136 ~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~ 214 (403)
T 3aup_A 136 QFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIF 214 (403)
T ss_dssp EEEEEEECGGGGSSSSSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTT
T ss_pred CEEEECCcccccccCCCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-Cchhcccccccccc
Confidence 8999999987544 444578999999999999999997665555999999998656689999999 7643
Q ss_pred -CceeeecCCCCCCceeEEEeEEEECCEEe-eeCCcee----cCCCceEEecccceeeeCHHHHHHHHHHHHHHcccccc
Q 016765 125 -DMVFSHSDPFRSPYYNIELKELRVAGKPL-KVSPRIF----DGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKR 198 (383)
Q Consensus 125 -~~~~~~~~~~~~~~w~v~l~~i~v~~~~~-~~~~~~~----~~~~~~ivDSGts~~~lP~~~~~~i~~~i~~~~~~~~~ 198 (383)
.+.|+++......+|.|.|++|.|+++.+ .++...+ .+...+||||||++++||+++|++|+++|.+++..+.+
T Consensus 215 ~~l~~~Pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~ 294 (403)
T 3aup_A 215 HDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQ 294 (403)
T ss_dssp TTEEEEECEECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGE
T ss_pred CceeecccccCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccc
Confidence 23444443322379999999999999988 6665443 13457999999999999999999999999877643333
Q ss_pred ccCCCCCCccccccCCcCCcccccCCCCeEEEEECCC--eEEEEcCCceEEEecccCCeEEEEEEeCCC---CCeeeccE
Q 016765 199 IRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNG--QKLTLSPENYLFRHMKVSGAYCLGIFQNSD---STTLLGGI 273 (383)
Q Consensus 199 ~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g--~~~~l~p~~yi~~~~~~~~~~Cl~~~~~~~---~~~ILG~~ 273 (383)
.... .....|++ |+.. ..+|+|+|+|+++ ++|.|++++|+++... +..|+++..... +.||||+.
T Consensus 295 ~~~~--~~~~~c~~-----c~~~-~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~~~~~~~~~~~~~~ILG~~ 364 (403)
T 3aup_A 295 VKSV--APFGLCFN-----SNKI-NAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCLGVMNGGMQPRAEITLGAR 364 (403)
T ss_dssp ECCC--TTCSCEEC-----GGGC-CCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEECEEECCSCCSSSEEECHH
T ss_pred cCCC--CCCCceEE-----CCCc-CcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEEEEEcCCCCCCCcEEEChH
Confidence 2211 12346753 4433 3799999999655 6999999999997642 578997766542 58999999
Q ss_pred EEEeEEEEEECCCCEEEE-------ecCCcchh
Q 016765 274 VVRNTLVTYDRGNDKVGF-------WKTNCSEL 299 (383)
Q Consensus 274 Flr~~yvvFD~~~~rIGf-------a~~~C~~~ 299 (383)
|||++|+|||++++|||| ++++|+..
T Consensus 365 fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~~~ 397 (403)
T 3aup_A 365 QLEENLVVFDLARSRVGFSTSSLHSHGVKCADL 397 (403)
T ss_dssp HHTTSCEEEETTTTEEEEESSCGGGGTCCGGGS
T ss_pred HhcCeEEEEECCCCEEEEecccccccCCCcccc
Confidence 999999999999999999 67778754
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=7.4e-44 Score=349.66 Aligned_cols=287 Identities=17% Similarity=0.323 Sum_probs=216.9
Q ss_pred CccccccCCC-CC---------CCCC-------CCCCc-eeEEEeCCCCeEEEEEEEEEEEeCCCC-CCCCccE----EE
Q 016765 3 NTYQALKCNP-DC---------NCDN-------DRKEC-IYERRYAEMSTSSGVLGVDVISFGNES-ELVPQRA----VF 59 (383)
Q Consensus 3 st~~~~~C~~-~c---------~C~~-------~~~~C-~~~i~Y~~g~~~~G~~~~D~v~l~~~~-~~~~~~~----~f 59 (383)
.+|++++|++ .| .|.. .++.| .|.+.|++|+.++|.+++|+|+|++.. .+.++++ .|
T Consensus 43 ~~~~~~~C~s~~C~~~~~~~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~F 122 (381)
T 1t6e_X 43 QPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLA 122 (381)
T ss_dssp CCCCCCBTTSHHHHHHHSSCCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEE
T ss_pred CCCCccCCCCchhccccCCCCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEe
Confidence 4567788874 35 3653 23578 599999999988999999999998521 1344454 67
Q ss_pred EeeEccCCCCcCCCcceEeecCCCCCchHHHhHhcCCCCCceEEeecCCCCCCCceeeCCCCCC---C--CceeeecCCC
Q 016765 60 GCENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPP---P--DMVFSHSDPF 134 (383)
Q Consensus 60 G~~~~~s~~~~~~~~dGIlGLg~~~~S~~~~L~~~g~I~~~FSl~l~~~~~~~G~l~fGg~d~~---~--~~~~~~~~~~ 134 (383)
||++.+........+|||||||++.+|++.||.++++++++||+||.+. .+|.|+|||+|.. + .+.|+++...
T Consensus 123 g~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~ 200 (381)
T 1t6e_X 123 ACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTK 200 (381)
T ss_dssp EECCGGGGTTSCTTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCC
T ss_pred ecCcccccCCCCCCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccC
Confidence 9998763221235689999999999999999999997789999999874 6799999998764 1 4556665432
Q ss_pred -CCCceeEEEeEEEECCEEeeeCCceecCCCceEEecccceeeeCHHHHHHHHHHHHHHcc-------ccccccCCCCCC
Q 016765 135 -RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH-------VLKRIRGPDPNY 206 (383)
Q Consensus 135 -~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSGts~~~lP~~~~~~i~~~i~~~~~-------~~~~~~~~~~~~ 206 (383)
...+|.|.|++|.|+++.+.++...|. +..+||||||++++||+++|++|.++|.+++. .+.+... ....
T Consensus 201 ~~~~~y~v~l~~i~vg~~~~~~~~~~~~-~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~-~~~~ 278 (381)
T 1t6e_X 201 GGSPAHYISARSIVVGDTRVPVPEGALA-TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVE-AVAP 278 (381)
T ss_dssp TTCCSCEECEEEEEETTEECCCCTTCSC-TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEEC-CCTT
T ss_pred CCCcceEEEEEEEEEcCEEecCCHHHcc-CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCC-CCCC
Confidence 224677999999999999887765553 45799999999999999999999999988763 1222211 1123
Q ss_pred ccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEEecccCCeEEEEEEeCCC--------CCeeeccEEEEeE
Q 016765 207 DDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNSD--------STTLLGGIVVRNT 278 (383)
Q Consensus 207 ~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~~~~~~~Cl~~~~~~~--------~~~ILG~~Flr~~ 278 (383)
...|++.....-......+|+|+|+|++|++|.|++++|+++... +.+|+++..... +.||||+.|||++
T Consensus 279 ~~~C~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~ 356 (381)
T 1t6e_X 279 FGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACVAFVEMKGVAAGDGRAPAVILGGAQMEDF 356 (381)
T ss_dssp CSCEEEGGGCCEETTEECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEESEEECCCCC------CSEEECHHHHTTE
T ss_pred CCccCCCCCCcccccCCcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEEEEEcCCCcccccCCCceEEEChHHhCCc
Confidence 578975432110011237999999996679999999999998653 679998776543 5799999999999
Q ss_pred EEEEECCCCEEEEecCC
Q 016765 279 LVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 279 yvvFD~~~~rIGfa~~~ 295 (383)
|+|||++++|||||++.
T Consensus 357 yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 357 VLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp EEEEETTTTEEEEEECC
T ss_pred EEEEECCCCEEEEeccc
Confidence 99999999999999874
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=343.82 Aligned_cols=251 Identities=25% Similarity=0.438 Sum_probs=201.0
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCC-CcCCCcceEeecCCCCC------chHHHhHh
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGIlGLg~~~~------S~~~~L~~ 93 (383)
..|.|.+.|++|+ ++|.+++|+|+|++ +++.++.|||++.+.+. +....+|||||||++.+ +++++|++
T Consensus 78 ~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 153 (351)
T 1tzs_A 78 PGQSFSIQYGTGS-LSGIIGADQVSVEG---LTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMA 153 (351)
T ss_dssp CSCEEEEESSSCE-EEEEEEEEEEEETT---EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHH
T ss_pred CCCEEEEEeCCCC-eEEEEEEeEEEECC---eEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHH
Confidence 5799999999997 79999999999998 57889999999887664 33457899999999865 48999999
Q ss_pred cCCCC-CceEEeecCCCCC--CCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEe
Q 016765 94 KGVIS-DSFSLCYGGMDVG--GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (383)
Q Consensus 94 ~g~I~-~~FSl~l~~~~~~--~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivD 169 (383)
+|+|. ++||+||++.... .|.|+|||+|+++ ...+.|++.....+|.|.|++|.|+++.+.. ..+..++||
T Consensus 154 qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~-----~~~~~aiiD 228 (351)
T 1tzs_A 154 QNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMFC-----SEGCQAIVD 228 (351)
T ss_dssp TTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEEC-----TTCEEEEEC
T ss_pred CCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEEc-----CCCceEEec
Confidence 99997 8999999986433 7999999999986 3344454444578999999999999987632 245689999
Q ss_pred cccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEEe
Q 016765 170 SGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRH 249 (383)
Q Consensus 170 SGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~ 249 (383)
|||++++||++++++|.+++++... . ..|..+|+. . ..+|+|+|+| +|.+|.|++++|+++.
T Consensus 229 SGTs~~~lP~~~~~~l~~~~~~~~~-------~-g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~yi~~~ 290 (351)
T 1tzs_A 229 TGTSLITGPSDKIKQLQNAIGAAPV-------D-GEYAVECAN--------L-NVMPDVTFTI-NGVPYTLSPTAYTLLD 290 (351)
T ss_dssp TTCSSEEECHHHHHHHHHHHTCEEC-------S-SSEEECGGG--------G-GGSCCEEEEE-TTEEEEECTTTSEECC
T ss_pred cCCcceeCCHHHHHHHHHHhCCccc-------C-CeEEEeCCC--------C-ccCCcEEEEE-CCEEEEECHHHhEeec
Confidence 9999999999999999999864321 1 234556742 2 4799999999 7999999999999876
Q ss_pred cccCCeEEEEEEeC------CCCCeeeccEEEEeEEEEEECCCCEEEEecCCcch
Q 016765 250 MKVSGAYCLGIFQN------SDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSE 298 (383)
Q Consensus 250 ~~~~~~~Cl~~~~~------~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~C~~ 298 (383)
...++..|+..+.. ..+.||||++|||++|+|||++++|||||+++|..
T Consensus 291 ~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s 345 (351)
T 1tzs_A 291 FVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWS 345 (351)
T ss_dssp -----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC---
T ss_pred cCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCccc
Confidence 53234679865543 24689999999999999999999999999999875
No 5
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-43 Score=342.56 Aligned_cols=242 Identities=19% Similarity=0.336 Sum_probs=204.3
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCcCCCcceEeecCCCCC--------chHHHhH
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL--------SVVDQLV 92 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~~~~~dGIlGLg~~~~--------S~~~~L~ 92 (383)
..|.|.+.|++|+.++|.+++|+|+|++ +++.++.|||++.+. ..+||||||++.+ +++++|+
T Consensus 76 ~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~~~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~~~~~~L~ 146 (334)
T 1j71_A 76 LNQDFSIEYGDLTSSQGSFYKDTVGFGG---ISIKNQQFADVTTTS------VDQGIMGIGFTADEAGYNLYDNVPVTLK 146 (334)
T ss_dssp EEEEEEEEBTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEES------SSSCEEECSCGGGSSTTCCCCCHHHHHH
T ss_pred CCCceEEEECCCCEEEEEEEEEEEEECC---EEEccEEEEEEEecC------CCccEEEEcCCcccCccccCCcHHHHHH
Confidence 3799999999999889999999999998 578899999998764 4899999999764 7899999
Q ss_pred hcCCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEec
Q 016765 93 EKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDS 170 (383)
Q Consensus 93 ~~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDS 170 (383)
++|+|+ ++||+||++.+...|.|+|||+|+++ ...+.|++.....+|.|.|++|.|+++.+.. +..++|||
T Consensus 147 ~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~-------~~~~iiDS 219 (334)
T 1j71_A 147 KQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVST-------NADVVLDS 219 (334)
T ss_dssp HTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEE-------EEEEEECT
T ss_pred HCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEeccC-------CccEEEeC
Confidence 999997 89999999765568999999999987 3455555555667999999999999998753 34799999
Q ss_pred ccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCc-cccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEEe
Q 016765 171 GTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYD-DICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRH 249 (383)
Q Consensus 171 Gts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~ 249 (383)
||++++||++++++|.+++.++.. .....|. .+|+ .+|+|+|+|.+|.++.|++++|+++.
T Consensus 220 GTt~~~lP~~~~~~l~~~~~~~~~------~~~~~~~~~~C~------------~~p~i~f~f~~g~~~~i~~~~y~~~~ 281 (334)
T 1j71_A 220 GTTITYFSQSTADKFARIVGATWD------SRNEIYRLPSCD------------LSGDAVFNFDQGVKITVPLSELILKD 281 (334)
T ss_dssp TCSSEEECHHHHHHHHHHHTCEEE------TTTTEEECSSSC------------CCSEEEEEESTTCEEEEEGGGGEEEC
T ss_pred CCCcEecCHHHHHHHHHHcCCccc------CCCceEEEEcCC------------CCCceEEEEcCCcEEEECHHHheeec
Confidence 999999999999999999976542 1112344 5662 48999999977899999999999986
Q ss_pred cccCCeEEEEEEeCCCCCeeeccEEEEeEEEEEECCCCEEEEecCCcchh
Q 016765 250 MKVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (383)
Q Consensus 250 ~~~~~~~Cl~~~~~~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~C~~~ 299 (383)
.+ +..|+..+... +.||||++|||++|+|||++++|||||+++|...
T Consensus 282 ~~--~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 328 (334)
T 1j71_A 282 SD--SSICYFGISRN-DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSS 328 (334)
T ss_dssp SS--SSCEEESEEEC-TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSC
T ss_pred CC--CCeeEEEEeEC-CCcEEChHhhccEEEEEECCCCEEEEEecCCCCc
Confidence 43 34598777664 5799999999999999999999999999999754
No 6
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=7.3e-44 Score=349.23 Aligned_cols=247 Identities=24% Similarity=0.424 Sum_probs=203.2
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCC-CcCCCcceEeecCCCCC------chHHHhHh
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGIlGLg~~~~------S~~~~L~~ 93 (383)
..|.|.+.|++|+ ++|.+++|+|+|++ ++++ +.|||++.+.+. +....+|||||||++.+ +++++|++
T Consensus 118 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~ 192 (383)
T 2x0b_A 118 NGTELTLRYSTGT-VSGFLSQDIITVGG---ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIIS 192 (383)
T ss_dssp EEEEEEEECSSCE-EEEEEEEEEEEETT---EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHT
T ss_pred CCcEEEEEcCCcc-EEEEEEeeEEEEcC---ceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHHHHHHh
Confidence 3699999999997 79999999999998 5777 999999988664 33457899999999865 58999999
Q ss_pred cCCCC-CceEEeecCCCCC----CCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceE
Q 016765 94 KGVIS-DSFSLCYGGMDVG----GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (383)
Q Consensus 94 ~g~I~-~~FSl~l~~~~~~----~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~i 167 (383)
+|+|. ++||+||++.... +|.|+|||+|+++ ...+.|++.....||.|.|++|.|+++.+. +..+..++
T Consensus 193 qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w~v~l~~i~v~~~~~~-----~~~~~~ai 267 (383)
T 2x0b_A 193 QGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-----CEDGCLAL 267 (383)
T ss_dssp TTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSCEEEECEEEESSCCCB-----STTCEEEE
T ss_pred CCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceEEEEEeEEEeCCceEE-----cCCCcEEE
Confidence 99998 8999999986433 8999999999987 345566655667899999999999998752 23467899
Q ss_pred EecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEE
Q 016765 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (383)
Q Consensus 168 vDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~ 247 (383)
|||||+++++|++++++|.+++++.. ....|..+|+. . ..+|+|+|+| +|++|.|++++|++
T Consensus 268 iDTGTs~~~lP~~~~~~i~~~i~a~~--------~~g~~~v~C~~--------~-~~~P~i~f~~-~g~~~~l~~~~yi~ 329 (383)
T 2x0b_A 268 VDTGASYISGSTSSIEKLMEALGAKK--------RLFDYVVKCNE--------G-PTLPDISFHL-GGKEYTLTSADYVF 329 (383)
T ss_dssp ECTTCSSEEECHHHHHHHHHHHTCEE--------CSSCEEEEGGG--------T-TTCCCEEEEE-TTEEEEECHHHHBC
T ss_pred EcCCCceEEcCHHHHHHHHHHhCCcc--------cCCcEEEeccc--------c-ccCceEEEEE-CCEEEEECHHHhEe
Confidence 99999999999999999999986432 12234456743 2 5799999999 79999999999998
Q ss_pred EecccCCeEEEEEEeC------CCCCeeeccEEEEeEEEEEECCCCEEEEecCC
Q 016765 248 RHMKVSGAYCLGIFQN------SDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 248 ~~~~~~~~~Cl~~~~~------~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~ 295 (383)
+....++..|+..+.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 330 ~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 330 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp CCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 7754335689965543 24689999999999999999999999999863
No 7
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.4e-43 Score=341.20 Aligned_cols=249 Identities=20% Similarity=0.323 Sum_probs=204.7
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCcCCCcceEeecCCCCC--------chHHHhH
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL--------SVVDQLV 92 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~~~~~dGIlGLg~~~~--------S~~~~L~ 92 (383)
..|.|.+.|++|+.++|.+++|+|+|++ +++.++.|||++.++ ..+||||||++.. +++++|+
T Consensus 76 ~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~~~~~~L~ 146 (342)
T 2qzx_A 76 LNTRFDIKYGDGSYAKGKLYKDTVGIGG---VSVRDQLFANVWSTS------ARKGILGIGFQSGEATEFDYDNLPISLR 146 (342)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEEC------SSSCEEECSCGGGCSSSSCCCCHHHHHH
T ss_pred CCCcEEEEeCCCCeEEEEEEEEEEEECC---EEecceEEEEEEecC------CCcCEEEEccccccCCCccCccHHHHHH
Confidence 3799999999999889999999999998 578899999998764 4899999999764 7899999
Q ss_pred hcCCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEec
Q 016765 93 EKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDS 170 (383)
Q Consensus 93 ~~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDS 170 (383)
++|+|+ ++||+||++.+...|.|+|||+|+++ ...+.|++.....+|.|.|++|.|+++.+.. +..++|||
T Consensus 147 ~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~-------~~~aiiDS 219 (342)
T 2qzx_A 147 NQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVDA-------NTNVLLDS 219 (342)
T ss_dssp HTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE-------EEEEEECT
T ss_pred HCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecCC-------CcCEEEeC
Confidence 999997 89999999765568999999999987 3445555555567999999999999998753 34799999
Q ss_pred ccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEEec
Q 016765 171 GTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM 250 (383)
Q Consensus 171 Gts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~ 250 (383)
||++++||++++++|.+++.+..... ......|..+|+ .+|+|+|+|.+|.++.|++++|+++..
T Consensus 220 GTt~~~lP~~~~~~l~~~~~~~~~~~---~~~~~~~~~~C~------------~~p~i~f~f~~g~~~~i~~~~~~~~~~ 284 (342)
T 2qzx_A 220 GTTISYFTRSIVRNILYAIGAQMKFD---SAGNKVYVADCK------------TSGTIDFQFGNNLKISVPVSEFLFQTY 284 (342)
T ss_dssp TCSSEEECHHHHHHHHHHHTCEEEEC---TTSCEEEEECTT------------CCCEEEEEETTTEEEEEEGGGGEECCB
T ss_pred CCCCEEcCHHHHHHHHHHhCCeeeec---cCCCcEEEEECC------------CCCcEEEEECCCcEEEEcHHHhccccc
Confidence 99999999999999999997654210 011113344562 489999999778999999999998743
Q ss_pred ---ccCCeEEEEEEeCCCCCeeeccEEEEeEEEEEECCCCEEEEecCCcchhhh
Q 016765 251 ---KVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWR 301 (383)
Q Consensus 251 ---~~~~~~Cl~~~~~~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~C~~~~~ 301 (383)
...+..|+..+... +.||||++|||++|+|||++++|||||+++|....+
T Consensus 285 ~~~~~~~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~ 337 (342)
T 2qzx_A 285 YTSGKPFPKCEVRIRES-EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSESD 337 (342)
T ss_dssp CTTSCBCSSEEESEEEC-SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCC
T ss_pred ccCCCCCCccEEEEecC-CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCCCC
Confidence 11245798877664 579999999999999999999999999999976443
No 8
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.3e-43 Score=346.39 Aligned_cols=245 Identities=26% Similarity=0.477 Sum_probs=200.1
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCC-CcCCCcceEeecCCCCC------chHHHhHh
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGIlGLg~~~~------S~~~~L~~ 93 (383)
..|.|.+.|++|+ ++|.+++|+|+|++ +++.++.|||++.+.+. +....+|||||||++.+ +++++|++
T Consensus 111 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~ 186 (370)
T 3psg_A 111 TSQELSITYGTGS-MTGILGYDTVQVGG---ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWD 186 (370)
T ss_dssp EEEEEEEESSSCE-EEEEEEEEEEEETT---EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred CCcEEEEEeCCce-EEEEEEEEEEeeCC---cccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHHHHH
Confidence 3699999999997 79999999999998 58889999999988764 44567899999999765 58999999
Q ss_pred cCCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEecc
Q 016765 94 KGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (383)
Q Consensus 94 ~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSG 171 (383)
+|+|+ ++||+||++....+|.|+|||+|+++ ...+.|++.....+|.|.+++|.|+++.+.. ..+..++||||
T Consensus 187 qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~l~~i~v~g~~~~~-----~~~~~aiiDTG 261 (370)
T 3psg_A 187 QGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIAC-----SGGCQAIVDTG 261 (370)
T ss_dssp TTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEEC-----TTCEEEEECTT
T ss_pred CCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccccceeEEEEeEEEECCEEEec-----CCCceEEEcCC
Confidence 99998 89999999875568999999999987 3455565555678999999999999987752 24578999999
Q ss_pred cceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEEecc
Q 016765 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMK 251 (383)
Q Consensus 172 ts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~~ 251 (383)
|+++++|++++++|.+++++... ....|..+|. .. ..+|+|+|+| +|++|.|++++|+.+ .
T Consensus 262 Ts~~~lP~~~~~~i~~~i~a~~~-------~~g~~~v~C~--------~~-~~lP~i~f~~-~g~~~~l~~~~yi~~-~- 322 (370)
T 3psg_A 262 TSLLTGPTSAIANIQSDIGASEN-------SDGEMVISCS--------SI-DSLPDIVFTI-DGVQYPLSPSAYILQ-D- 322 (370)
T ss_dssp CCSEEEEHHHHHHHHHHTTCEEC-------TTCCEECCGG--------GG-GGCCCEEEEE-TTEEEEECHHHHEEE-C-
T ss_pred CCcEECCHHHHHHHHHHhCCccc-------CCCcEEEECC--------Cc-ccCCcEEEEE-CCEEEEECHHHhccc-C-
Confidence 99999999999999999865421 1223445563 33 5799999999 799999999999998 2
Q ss_pred cCCeEEEEEEeCC------CCCeeeccEEEEeEEEEEECCCCEEEEecCC
Q 016765 252 VSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 252 ~~~~~Cl~~~~~~------~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~ 295 (383)
...|+..+... ++.||||++|||++|+|||++++|||||++.
T Consensus 323 --~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 323 --DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp --SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred --CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 34598766542 2359999999999999999999999999973
No 9
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=3e-43 Score=340.36 Aligned_cols=249 Identities=20% Similarity=0.332 Sum_probs=203.3
Q ss_pred CceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCcCCCcceEeecCCCC-------CchHHHhHhc
Q 016765 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGR-------LSVVDQLVEK 94 (383)
Q Consensus 22 ~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~~~~~dGIlGLg~~~-------~S~~~~L~~~ 94 (383)
.|.|.+.|++|+.++|.+++|+|+|++ +++.++.|||++..+ ..+||||||++. .+++++|+++
T Consensus 77 ~~~~~i~Yg~gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~~~~~L~~q 147 (342)
T 3pvk_A 77 NTPFKIGYGDGSSSQGTLYKDTVGFGG---VSIKNQVLADVDSTS------IDQGILGVGYKTNEAGGSYDNVPVTLKKQ 147 (342)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEES------SSSCEEECSCGGGCSSCSSCCHHHHHHHT
T ss_pred CCeEEEEecCCCeEEEEEEEEEEEECC---EEecceEEEEEEccC------CCccEEEecCccccccccCCcHHHHHHhc
Confidence 799999999999899999999999998 578899999998765 479999999986 3799999999
Q ss_pred CCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEeccc
Q 016765 95 GVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGT 172 (383)
Q Consensus 95 g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSGt 172 (383)
|+|. ++||+||++.+...|.|+|||+|+++ ...+.|.+.....+|.|.|++|.|+++.+..+ +..++|||||
T Consensus 148 g~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~------~~~~iiDSGt 221 (342)
T 3pvk_A 148 GVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINTD------NVDVLLDSGT 221 (342)
T ss_dssp TSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEEE------EEEEEECTTC
T ss_pred CCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecCC------CceEEEeCCC
Confidence 9998 89999999866668999999999987 34445555555679999999999999988652 3589999999
Q ss_pred ceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEEeccc
Q 016765 173 TYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV 252 (383)
Q Consensus 173 s~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~~~ 252 (383)
++++||++++++|.+++.+...... .....|..+|+ ..|+|+|+|++|.++.|++++|+++....
T Consensus 222 t~~~lP~~~~~~i~~~~~~~~~~~~---~~~~~~~~~C~------------~~p~i~f~f~~g~~~~vp~~~~~~~~~~~ 286 (342)
T 3pvk_A 222 TITYLQQDLADQIIKAFNGKLTQDS---NGNSFYEVDCN------------LSGDVVFNFSKNAKISVPASEFAASLQGD 286 (342)
T ss_dssp SSEEECHHHHHHHHHHTTCEEEECT---TSCEEEEECSC------------CCSEEEEEESTTCEEEEEGGGGEEC----
T ss_pred CCeecCHHHHHHHHHHcCCeecccC---CCceEEEEecC------------CCCceEEEECCCCEEEEcHHHheeecccc
Confidence 9999999999999999976543110 00112455662 46999999966899999999999874321
Q ss_pred CC---eEEEEEEeCCCCCeeeccEEEEeEEEEEECCCCEEEEecCCcchhhh
Q 016765 253 SG---AYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWR 301 (383)
Q Consensus 253 ~~---~~Cl~~~~~~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~C~~~~~ 301 (383)
.+ ..|+..+.. .+.||||++|||++|+|||++++|||||+++|....+
T Consensus 287 ~g~~~~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~ 337 (342)
T 3pvk_A 287 DGQPYDKCQLLFDV-NDANILGDNFLRSAYIVYDLDDNEISLAQVKYTSASS 337 (342)
T ss_dssp ------CEEESEEE-CTTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCC
T ss_pred CCCcCCeeEEEEee-CCCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCCCC
Confidence 22 679877766 4789999999999999999999999999999985443
No 10
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=3e-43 Score=340.04 Aligned_cols=246 Identities=22% Similarity=0.347 Sum_probs=204.1
Q ss_pred CceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCcCCCcceEeecCCCCC----------------
Q 016765 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL---------------- 85 (383)
Q Consensus 22 ~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~~~~~dGIlGLg~~~~---------------- 85 (383)
.|.|.+.|++|+.++|.+++|+|+|++ ++++++.|||++..++ .+||||||++..
T Consensus 71 ~~~~~i~Yg~gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~------~~GilGLg~~~~~~~~~~~~~~~~~~~~ 141 (339)
T 3fv3_A 71 GAAFTIRYGDGSTSQGTWGKDTVTING---VSITGQQIADVTQTSV------DQGILGIGYTSNEAVYDTSGRQTTPNYD 141 (339)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEESS------SSCEEECSCGGGCCCBCTTSCBCSCCCC
T ss_pred CceEEEEECCCceEEEEEEEEEEEECC---EEECceEEEEEEecCC------CceeEEecCccccccccccccccCccCC
Confidence 799999999998899999999999998 5788999999988764 699999999764
Q ss_pred chHHHhHhcCCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCC
Q 016765 86 SVVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGG 163 (383)
Q Consensus 86 S~~~~L~~~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ 163 (383)
+++++|+++|+|+ ++||+||++.+...|.|+|||+|+++ ...+.|.+.....+|.|+|++|.|+++.+.. +
T Consensus 142 ~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~-------~ 214 (339)
T 3fv3_A 142 NVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF-------G 214 (339)
T ss_dssp CHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE-------E
T ss_pred cHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC-------C
Confidence 3899999999998 89999999876668999999999987 3444555445567999999999999998764 2
Q ss_pred CceEEecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCC
Q 016765 164 HGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPE 243 (383)
Q Consensus 164 ~~~ivDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~ 243 (383)
..++|||||++++||++++++|.+++.+..... ......|..+|+. ..+|+|+|+|++|.+|.|+++
T Consensus 215 ~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~~----------~~~p~i~f~f~~g~~~~v~~~ 281 (339)
T 3fv3_A 215 DGALLDSGTTLTYFPSDFAAQLADKAGARLVQV---ARDQYLYFIDCNT----------DTSGTTVFNFGNGAKITVPNT 281 (339)
T ss_dssp EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE---ETTEEEEEECTTC----------CCCSEEEEEETTSCEEEEEGG
T ss_pred ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc---cccCceEEEecCC----------CCCCcEEEEECCCCEEEECHH
Confidence 579999999999999999999999997654311 0112234556742 368999999966899999999
Q ss_pred ceEEEecccCCeEEEEEEeCCCCCeeeccEEEEeEEEEEECCCCEEEEecCCcchhh
Q 016765 244 NYLFRHMKVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELW 300 (383)
Q Consensus 244 ~yi~~~~~~~~~~Cl~~~~~~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~C~~~~ 300 (383)
+|+++.. ...|+..+.. ++.||||++|||++|+|||++++|||||+++|....
T Consensus 282 ~~~~~~~---~~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s 334 (339)
T 3fv3_A 282 EYVYQNG---DGTCLWGIQP-SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTTDS 334 (339)
T ss_dssp GGEEECS---SSCEEESEEE-CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCC
T ss_pred HheeeCC---CCeEEEEEEe-CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCCcc
Confidence 9998863 4467544444 568999999999999999999999999999998543
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=4.5e-43 Score=336.67 Aligned_cols=244 Identities=24% Similarity=0.412 Sum_probs=200.7
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCC-CcCCCcceEeecCCCCC------chHHHhHh
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGIlGLg~~~~------S~~~~L~~ 93 (383)
..|+|.+.|++|+ ++|.+++|+|+|++ +++.++.|||++.+++. +.....+||||||++.+ +++++|++
T Consensus 69 ~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 144 (323)
T 3cms_A 69 LGKPLSIHYGTGS-MQGILGYDTVTVSN---IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMN 144 (323)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHH
T ss_pred CCcEEEEEeCCCC-eEEEEEEEEEEECC---eEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHH
Confidence 3699999999997 79999999999998 57889999999987653 33456899999999754 58999999
Q ss_pred cCCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEecc
Q 016765 94 KGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (383)
Q Consensus 94 ~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSG 171 (383)
+|+|. ++||+||++.+. .|.|+|||+|+++ ...+.|++.....+|.|.|++|.|+++.+..+ .+..++||||
T Consensus 145 q~~i~~~~FS~~l~~~~~-~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~-----~~~~aiiDSG 218 (323)
T 3cms_A 145 RHLVAQDLFSVYMDRNGQ-ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVACE-----GGCQAILDTG 218 (323)
T ss_dssp TTCSSSSEEEEECCTTSS-CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEEST-----TCEEEEECTT
T ss_pred CCCCCCCEEEEEECCCCC-CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEeecC-----CCcEEEEecC
Confidence 99997 899999998643 3999999999987 34455555556789999999999999987532 3568999999
Q ss_pred cceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEEecc
Q 016765 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMK 251 (383)
Q Consensus 172 ts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~~ 251 (383)
|++++||++++++|.+++.+... ....|..+|+. . ..+|+|+|+| +|+++.|++++|+++.
T Consensus 219 Tt~~~lP~~~~~~l~~~~~~~~~-------~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~~-- 279 (323)
T 3cms_A 219 TSKLVGPSSDILNIQQAIGATQN-------QYGEFDIDCDN--------L-SYMPTVVFEI-NGKMYPLTPSAYTSQD-- 279 (323)
T ss_dssp CCSEEECHHHHHHHHHHHTCEEE-------TTTEEEECTTC--------T-TTSCCEEEEE-TTEEEEECHHHHEEEE--
T ss_pred CccEeCCHHHHHHHHHHhCCeec-------CCCcEEEECCC--------C-ccCceEEEEE-CCEEEEECHHHhccCC--
Confidence 99999999999999999864321 12234456742 2 4799999999 7999999999999982
Q ss_pred cCCeEEEEEEeCC--CCCeeeccEEEEeEEEEEECCCCEEEEecCC
Q 016765 252 VSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 252 ~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~ 295 (383)
+..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 280 --~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 280 --QGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp --TTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 56898655443 5789999999999999999999999999863
No 12
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=8.8e-43 Score=334.13 Aligned_cols=243 Identities=24% Similarity=0.439 Sum_probs=202.3
Q ss_pred CceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCC-CcCCCcceEeecCCCCC------chHHHhHhc
Q 016765 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEK 94 (383)
Q Consensus 22 ~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGIlGLg~~~~------S~~~~L~~~ 94 (383)
.|.|.+.|++|+ ++|.+++|+|+|++ ++++++.|||++.+++. +.....+||||||++.+ +++++|+++
T Consensus 67 ~~~~~i~Yg~gs-~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~ 142 (320)
T 4aa9_A 67 GKPLSIHYGTGS-MEGFLGYDTVTVSN---IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDR 142 (320)
T ss_dssp EEEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHT
T ss_pred CcEEEEEECCcE-EEEEEEEEEEEECC---EeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhC
Confidence 699999999997 79999999999998 57889999999988764 33456799999999754 589999999
Q ss_pred CCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEeccc
Q 016765 95 GVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGT 172 (383)
Q Consensus 95 g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSGt 172 (383)
|+|+ ++||+||++. ...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+..+ .+..++|||||
T Consensus 143 g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~-----~~~~~iiDsGt 216 (320)
T 4aa9_A 143 HLVARDLFSVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVACV-----GGCQAILDTGT 216 (320)
T ss_dssp TCSSSSEEEEECCSS-SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEEST-----TCEEEEECTTC
T ss_pred CCCCCceEEEEeCCC-CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEeccC-----CCcEEEEECCC
Confidence 9997 8999999986 568999999999987 34555555556789999999999999987642 35689999999
Q ss_pred ceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEEeccc
Q 016765 173 TYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV 252 (383)
Q Consensus 173 s~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~~~ 252 (383)
++++||++++++|.+++++... ....|..+|. .. ..+|+|+|+| +|+++.|++++|+.+.
T Consensus 217 t~~~lP~~~~~~i~~~~~~~~~-------~~g~~~~~C~--------~~-~~~p~i~f~f-~g~~~~l~~~~y~~~~--- 276 (320)
T 4aa9_A 217 SVLFGPSSDILKIQMAIGATEN-------RYGEFDVNCG--------NL-RSMPTVVFEI-NGRDYPLSPSAYTSKD--- 276 (320)
T ss_dssp SSEEEEHHHHHHHHHHTTCEEC-------TTSCEEECGG--------GG-GGCCCEEEEE-TTEEEEECHHHHEEEE---
T ss_pred CcEECCHHHHHHHHHHhCCccc-------CCCcEEEeCC--------CC-CcCceEEEEE-CCEEEEECHHHhccCC---
Confidence 9999999999999999854321 1223455664 22 4799999999 7999999999999763
Q ss_pred CCeEEEEEEeC-C-CCCeeeccEEEEeEEEEEECCCCEEEEecCC
Q 016765 253 SGAYCLGIFQN-S-DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 253 ~~~~Cl~~~~~-~-~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~ 295 (383)
+..|+..+.. . ++.||||++|||++|+|||++++|||||+++
T Consensus 277 -~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 277 -QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp -TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 5679864443 3 4679999999999999999999999999874
No 13
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=3.2e-42 Score=331.56 Aligned_cols=244 Identities=21% Similarity=0.405 Sum_probs=199.8
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCC-CCcCCCcceEeecCCCCC------chHHHhHh
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETG-DLYTQRADGIMGLGRGRL------SVVDQLVE 93 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~-~~~~~~~dGIlGLg~~~~------S~~~~L~~ 93 (383)
..|.|.+.|++| +++|.+++|+|+|++ ++++++.|||++.+++ .+.....|||||||++.+ +++++|++
T Consensus 68 ~~~~~~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 143 (329)
T 1dpj_A 68 NGTEFAIQYGTG-SLEGYISQDTLSIGD---LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQ 143 (329)
T ss_dssp EEEEEEEEETTE-EEEEEEEEEEEEETT---EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred CCcEEEEEECCc-eEEEEEEEEEEEECC---eEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHh
Confidence 369999999999 589999999999998 5788999999998765 344456899999999765 47899999
Q ss_pred cCCCC-CceEEeecCCC---CCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEE
Q 016765 94 KGVIS-DSFSLCYGGMD---VGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (383)
Q Consensus 94 ~g~I~-~~FSl~l~~~~---~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~iv 168 (383)
+|+|+ ++||+||++.. ..+|.|+|||+|+++ ...+.|++.....+|.|.|++|.|+++.+.. .+..++|
T Consensus 144 qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~------~~~~aii 217 (329)
T 1dpj_A 144 QDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAEL------ESHGAAI 217 (329)
T ss_dssp TTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEEC------SSCEEEE
T ss_pred cCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEecC------CCccEEe
Confidence 99997 89999998742 247999999999987 3455565555678999999999999988753 3568999
Q ss_pred ecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEE
Q 016765 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (383)
Q Consensus 169 DSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~ 248 (383)
||||++++||++++++|.+++.+.. .....|..+|. .. ..+|+|+|+| +|.++.|++++|+++
T Consensus 218 DSGTt~~~lP~~~~~~l~~~~~~~~-------~~~g~~~~~C~--------~~-~~~P~i~f~f-~g~~~~i~~~~y~~~ 280 (329)
T 1dpj_A 218 DTGTSLITLPSGLAEMINAEIGAKK-------GWTGQYTLDCN--------TR-DNLPDLIFNF-NGYNFTIGPYDYTLE 280 (329)
T ss_dssp CTTCSCEEECHHHHHHHHHHHTCEE-------CTTSSEEECGG--------GG-GGCCCEEEEE-TTEEEEECTTTSEEE
T ss_pred eCCCCcEECCHHHHHHHHHHhCCcc-------CCCCeEEEECC--------CC-CcCCcEEEEE-CCEEEEECHHHhEec
Confidence 9999999999999999999986431 12223444553 22 4799999999 689999999999997
Q ss_pred ecccCCeEEEEEEeC------CCCCeeeccEEEEeEEEEEECCCCEEEEecCC
Q 016765 249 HMKVSGAYCLGIFQN------SDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 249 ~~~~~~~~Cl~~~~~------~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~ 295 (383)
.. ..|+..+.. .++.||||++|||++|+|||++++|||||+++
T Consensus 281 ~~----~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 281 VS----GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp ET----TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CC----CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 63 579865542 24679999999999999999999999999864
No 14
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.1e-42 Score=338.87 Aligned_cols=252 Identities=19% Similarity=0.312 Sum_probs=203.6
Q ss_pred CceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCC-----C-CcCCCcceEeecCCCC-----------
Q 016765 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETG-----D-LYTQRADGIMGLGRGR----------- 84 (383)
Q Consensus 22 ~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~-----~-~~~~~~dGIlGLg~~~----------- 84 (383)
.|.|.+.|++|+ ++|.+++|+|+|++ +++.++.|||++.+++ . +.....+||||||++.
T Consensus 75 ~~~~~i~Yg~Gs-~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 150 (361)
T 1mpp_A 75 DYNLNITYGTGG-ANGIYFRDSITVGG---ATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDT 150 (361)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCC
T ss_pred CCeEEEEECCce-EEEEEEEEEEEECC---EEEeceEEEEEEeccCccccccccccCCCCCEEEeCCccccccccccccc
Confidence 699999999998 79999999999998 5788999999998876 3 4456789999999964
Q ss_pred -CchHHHhHhcCCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCCCCC----ceeEEEeEEEECCEEeeeCC
Q 016765 85 -LSVVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSP----YYNIELKELRVAGKPLKVSP 157 (383)
Q Consensus 85 -~S~~~~L~~~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~----~w~v~l~~i~v~~~~~~~~~ 157 (383)
.+++++|+++|+|. ++||+||++. ...|.|+|||+|+++ ...+.|++..... +|.|.|++|.|+++.+..+
T Consensus 151 ~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~- 228 (361)
T 1mpp_A 151 YNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSF- 228 (361)
T ss_dssp CCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEE-
T ss_pred CCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeeccC-
Confidence 35788999999997 8999999985 457999999999986 2333443333333 8999999999999887432
Q ss_pred ceecCCCceE-EecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCC-CeEEEEEC-C
Q 016765 158 RIFDGGHGTV-LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTF-PQVDMVFG-N 234 (383)
Q Consensus 158 ~~~~~~~~~i-vDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~-P~i~f~f~-~ 234 (383)
.+..++ |||||++++||++++++|.+++.+... .....|..+|+. . ..+ |+|+|+|. +
T Consensus 229 ----~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~------~~~g~~~~~C~~--------~-~~~~p~i~f~f~~g 289 (361)
T 1mpp_A 229 ----DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT------ESQQGYTVPCSK--------Y-QDSKTTFSLVLQKS 289 (361)
T ss_dssp ----EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE------EETTEEEEEHHH--------H-TTCCCEEEEEEECT
T ss_pred ----CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc------CCCCcEEEECCC--------c-ccCCCcEEEEEEcC
Confidence 245899 999999999999999999999966432 112234566753 2 467 99999993 3
Q ss_pred -----CeEEEEcCCceEEEecccCCeEEEEEEeC-CCCCeeeccEEEEeEEEEEECCCCEEEEecCCcchh
Q 016765 235 -----GQKLTLSPENYLFRHMKVSGAYCLGIFQN-SDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (383)
Q Consensus 235 -----g~~~~l~p~~yi~~~~~~~~~~Cl~~~~~-~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~C~~~ 299 (383)
|.+|.|++++|+++... ++..|+..+.. .++.||||++|||++|+|||++++|||||+++|...
T Consensus 290 ~~~~~g~~~~i~~~~y~~~~~~-~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~ 359 (361)
T 1mpp_A 290 GSSSDTIDVSVPISKMLLPVDK-SGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYE 359 (361)
T ss_dssp TCSSCEEEEEEEGGGGEEECSS-SSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTC
T ss_pred CcCCCCeEEEECHHHhEEecCC-CCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCCC
Confidence 89999999999998653 34689844443 467899999999999999999999999999999864
No 15
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=9.9e-43 Score=336.58 Aligned_cols=247 Identities=24% Similarity=0.419 Sum_probs=204.5
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCC-CcCCCcceEeecCCCCC------chHHHhHh
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGIlGLg~~~~------S~~~~L~~ 93 (383)
..|.|.+.|++|+ ++|.+++|+|+|++ +++ ++.|||++..++. +.....+||||||++.. +++++|++
T Consensus 75 ~~~~~~i~Yg~gs-~~G~~~~D~v~ig~---~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 149 (341)
T 3k1w_A 75 NGTELTLRYSTGT-VSGFLSQDIITVGG---ITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIIS 149 (341)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEEEETT---EEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred CCCEEEEEECCcE-EEEEEEEEEEEECC---cee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHH
Confidence 4799999999997 79999999999998 467 9999999988764 44556899999999775 48999999
Q ss_pred cCCCC-CceEEeecCCC----CCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceE
Q 016765 94 KGVIS-DSFSLCYGGMD----VGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (383)
Q Consensus 94 ~g~I~-~~FSl~l~~~~----~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~i 167 (383)
+|+|. ++||+||++.. ...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+..+ .+..++
T Consensus 150 qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~-----~~~~~i 224 (341)
T 3k1w_A 150 QGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCE-----DGCLAL 224 (341)
T ss_dssp HTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEECT-----TCEEEE
T ss_pred CCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEeecC-----CCCEEE
Confidence 99998 89999999864 348999999999987 34555655557889999999999999975432 356899
Q ss_pred EecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEE
Q 016765 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (383)
Q Consensus 168 vDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~ 247 (383)
|||||++++||++++++|.+++++... ... |..+|. .. ..+|+|+|+| +|.++.|++++|++
T Consensus 225 iDsGtt~~~lP~~~~~~i~~~~~~~~~-------~~g-~~~~C~--------~~-~~~p~i~f~f-~g~~~~l~~~~~~~ 286 (341)
T 3k1w_A 225 VDTGASYISGSTSSIEKLMEALGAKKR-------LFD-YVVKCN--------EG-PTLPDISFHL-GGKEYTLTSADYVF 286 (341)
T ss_dssp ECTTCSSEEECHHHHHHHHHHHTCEEC-------SSC-EEEEGG--------GG-GGCCCEEEEE-TTEEEEECHHHHBC
T ss_pred EECCCChhcCCHHHHHHHHHHcCCeec-------CCC-eEEeCC--------CC-CcCCcEEEEE-CCEEEEECHHHhee
Confidence 999999999999999999999965431 111 555663 22 4789999999 79999999999998
Q ss_pred EecccCCeEEEEEEeC-----C-CCCeeeccEEEEeEEEEEECCCCEEEEecCC
Q 016765 248 RHMKVSGAYCLGIFQN-----S-DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 248 ~~~~~~~~~Cl~~~~~-----~-~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~ 295 (383)
+....++..|+..+.. . .+.||||++|||++|+|||++++|||||+++
T Consensus 287 ~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 287 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp CSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 7654346789865554 2 5689999999999999999999999999985
No 16
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.1e-42 Score=332.08 Aligned_cols=243 Identities=24% Similarity=0.422 Sum_probs=200.1
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCC-CcCCCcceEeecCCCCC------chHHHhHh
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGIlGLg~~~~------S~~~~L~~ 93 (383)
..|.|++.|++|+. +|.+++|+|+|++ +++.++.|||++.+++. +.....+||||||++.+ +++++|++
T Consensus 67 ~~~~~~i~Yg~Gs~-~G~~~~D~v~~g~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 142 (324)
T 1am5_A 67 TGKTVDLTYGTGGM-RGILGQDTVSVGG---GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGS 142 (324)
T ss_dssp EEEEEEEECSSCEE-EEEEEEEEEESSS---SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred CCcEEEEEECCCCe-EEEEEECceeECC---cEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHh
Confidence 36999999999975 9999999999998 57889999999988764 34467899999999765 58999999
Q ss_pred cCCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEecc
Q 016765 94 KGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (383)
Q Consensus 94 ~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSG 171 (383)
+|+|. ++||+||++.+...|.|+|||+|+++ ...+.|++.....+|.|.|++|.|+++.+.. .+ ..++||||
T Consensus 143 qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~-----~~-~~aiiDSG 216 (324)
T 1am5_A 143 QSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAAC-----EG-CQAIVDTG 216 (324)
T ss_dssp TTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECCC-----CC-EEEEECTT
T ss_pred cCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceeec-----cC-ceEEEecC
Confidence 99997 89999999865568999999999986 2334444333567999999999999987632 12 68999999
Q ss_pred cceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEEecc
Q 016765 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMK 251 (383)
Q Consensus 172 ts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~~ 251 (383)
|++++||++++++|.+++.+. . ....|..+|+. . ..+|+|+|+| +|.++.|++++|+++.
T Consensus 217 Tt~~~lp~~~~~~l~~~~~~~-~-------~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~~-- 276 (324)
T 1am5_A 217 TSKIVAPVSALANIMKDIGAS-E-------NQGEMMGNCAS--------V-QSLPDITFTI-NGVKQPLPPSAYIEGD-- 276 (324)
T ss_dssp CSSEEECTTTHHHHHHHHTCE-E-------CCCCEECCTTS--------S-SSSCCEEEEE-TTEEEEECHHHHEEES--
T ss_pred CccEECCHHHHHHHHHHhCCc-c-------cCCcEEEeCCC--------c-ccCCcEEEEE-CCEEEEECHHHhcccC--
Confidence 999999999999999998654 1 12234566743 2 4799999999 7999999999999876
Q ss_pred cCCeEEEEEEeCC------CCCeeeccEEEEeEEEEEECCCCEEEEecCC
Q 016765 252 VSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 252 ~~~~~Cl~~~~~~------~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~ 295 (383)
+..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 277 --~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 277 --QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp --SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred --CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 45798655432 4579999999999999999999999999873
No 17
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.8e-42 Score=331.99 Aligned_cols=246 Identities=24% Similarity=0.454 Sum_probs=201.2
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCC-CcCCCcceEeecCCCCC------chHHHhHh
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGIlGLg~~~~------S~~~~L~~ 93 (383)
..|.|++.|++|+. +|.+++|+|+|++ +++.++.|||++.+++. +.....+||||||++.+ +++++|++
T Consensus 67 ~~~~~~i~Yg~gs~-~G~~~~D~v~~g~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 142 (329)
T 1htr_B 67 NGQTFSLQYGSGSL-TGFFGYDTLTVQS---IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQ 142 (329)
T ss_dssp EEEEEEEEETTEEE-EEEEEEEEEEETT---EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHH
T ss_pred CCcEEEEEeCCCCe-EEEEEeeeEEEcc---eEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHh
Confidence 36999999999975 9999999999998 57889999999988664 33457899999999865 58999999
Q ss_pred cCCCC-CceEEeecCCCCC-CCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEec
Q 016765 94 KGVIS-DSFSLCYGGMDVG-GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDS 170 (383)
Q Consensus 94 ~g~I~-~~FSl~l~~~~~~-~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDS 170 (383)
+|+|. ++||+||++.... .|.|+|||+|+++ ...+.|++.....+|.|.|++|.|+++.+.. ...+..++|||
T Consensus 143 qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~----~~~~~~aiiDS 218 (329)
T 1htr_B 143 EGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGW----CSEGCQAIVDT 218 (329)
T ss_dssp TTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCT----TTTCEEEEECT
T ss_pred cCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeee----cCCCceEEEec
Confidence 99997 8999999986443 7999999999987 3445555545678999999999999987642 12356899999
Q ss_pred ccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEEec
Q 016765 171 GTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM 250 (383)
Q Consensus 171 Gts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~ 250 (383)
||++++||++++++|.+++.+... ....|..+|+. . ..+|+|+|+| +|.++.|++++|+++..
T Consensus 219 GTt~~~lp~~~~~~l~~~~~~~~~-------~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~~~ 281 (329)
T 1htr_B 219 GTSLLTVPQQYMSALLQATGAQED-------EYGQFLVNCNS--------I-QNLPSLTFII-NGVEFPLPPSSYILSNN 281 (329)
T ss_dssp TCCSEEEEGGGHHHHHHHHTCEEC-------TTSCEEECGGG--------G-GGSCCEEEEE-TTEEEEECHHHHEEECS
T ss_pred CCccEECCHHHHHHHHHHhCCeec-------CCCeEEEeCCC--------c-ccCCcEEEEE-CCEEEEECHHHhcccCC
Confidence 999999999999999999865331 12234556742 2 4799999999 79999999999999874
Q ss_pred ccCCeEEEEEEeCC------CC-CeeeccEEEEeEEEEEECCCCEEEEecCC
Q 016765 251 KVSGAYCLGIFQNS------DS-TTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 251 ~~~~~~Cl~~~~~~------~~-~~ILG~~Flr~~yvvFD~~~~rIGfa~~~ 295 (383)
+ .|+..+... ++ .||||++|||++|+|||++++|||||+++
T Consensus 282 ---g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 282 ---G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp ---S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 3 898644331 34 79999999999999999999999999863
No 18
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3.2e-42 Score=337.15 Aligned_cols=243 Identities=23% Similarity=0.341 Sum_probs=200.4
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEc----cCCCCcCCCcceEeecCCCCC------chHHH
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENL----ETGDLYTQRADGIMGLGRGRL------SVVDQ 90 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~----~s~~~~~~~~dGIlGLg~~~~------S~~~~ 90 (383)
..|.|.+.|++|+ ++|.+++|+|+|++ +++.+ .|||++. ++ .+....+|||||||++.+ +++++
T Consensus 117 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~ 190 (375)
T 1miq_A 117 DGTKVDITYGSGT-VKGFFSKDLVTLGH---LSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIVVE 190 (375)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEEEETT---EEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHHHH
T ss_pred CCcEEEEEeCCCe-EEEEEEEEEEEEcC---ceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHHHH
Confidence 3699999999998 79999999999998 57788 9999998 55 343457899999999865 58999
Q ss_pred hHhcCCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEE
Q 016765 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (383)
Q Consensus 91 L~~~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~iv 168 (383)
|+++|+|. ++||+||++.+..+|.|+|||+|+++ ...+.|++.....+|.|.++ |.|+++.+ .+..++|
T Consensus 191 l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~--------~~~~aii 261 (375)
T 1miq_A 191 LKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM--------EKANVIV 261 (375)
T ss_dssp HHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE--------EEEEEEE
T ss_pred HHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc--------ccceEEe
Confidence 99999997 89999999865568999999999987 34455555556789999999 99999876 1358999
Q ss_pred ecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEE
Q 016765 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (383)
Q Consensus 169 DSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~ 248 (383)
||||++++||++++++|.+++.+... .....|..+|+. ..+|+|+|+| +|.+|.|++++|+++
T Consensus 262 DSGTs~~~lP~~~~~~l~~~~~~~~~------~~~g~~~~~C~~----------~~~P~i~f~f-~g~~~~l~~~~yi~~ 324 (375)
T 1miq_A 262 DSGTTTITAPSEFLNKFFANLNVIKV------PFLPFYVTTCDN----------KEMPTLEFKS-ANNTYTLEPEYYMNP 324 (375)
T ss_dssp CTTBSSEEECHHHHHHHHHHHTCEEC------TTSSCEEEETTC----------TTCCCEEEEC-SSCEEEECGGGSEEE
T ss_pred cCCCccEEcCHHHHHHHHHHhCCccc------CCCCeEEEECCC----------CCCCcEEEEE-CCEEEEECHHHhEee
Confidence 99999999999999999999965421 122235566742 3799999999 799999999999998
Q ss_pred ecccCCeEEEEEEeCCC---CCeeeccEEEEeEEEEEECCCCEEEEecCC
Q 016765 249 HMKVSGAYCLGIFQNSD---STTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 249 ~~~~~~~~Cl~~~~~~~---~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~ 295 (383)
....+...|+..+...+ +.||||++|||++|+|||++++|||||+++
T Consensus 325 ~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 325 ILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp SSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 75323468985554432 689999999999999999999999999873
No 19
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=7.9e-42 Score=328.30 Aligned_cols=242 Identities=22% Similarity=0.425 Sum_probs=198.7
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCcCCCcceEeecCCCCC-------chHHHhHh
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL-------SVVDQLVE 93 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~~~~~dGIlGLg~~~~-------S~~~~L~~ 93 (383)
..|.|.+.|++|+.++|.+++|+|+|++ +++.++.|||++.+++.+.....+||||||++.+ +++++|++
T Consensus 69 ~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~ 145 (325)
T 2apr_A 69 DGRTWSISYGDGSSASGILAKDNVNLGG---LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLIS 145 (325)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHH
T ss_pred CCCEEEEEECCCCCEEEEEEEEEEEECC---EEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHh
Confidence 3599999999999889999999999998 5788999999998776555556899999999754 58999999
Q ss_pred cCCCC-CceEEeecCC-CCCCCceeeCCCCCCC---CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEE
Q 016765 94 KGVIS-DSFSLCYGGM-DVGGGAMVLGGITPPP---DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (383)
Q Consensus 94 ~g~I~-~~FSl~l~~~-~~~~G~l~fGg~d~~~---~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~iv 168 (383)
+|+|. ++||+||++. ....|.|+|||+|+++ .+.++++.. ...+|.|.+++|.|+++ +. ..+..++|
T Consensus 146 qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~~v~l~~i~vg~~-~~------~~~~~~ii 217 (325)
T 2apr_A 146 QGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDN-SRGWWGITVDRATVGTS-TV------ASSFDGIL 217 (325)
T ss_dssp TTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBC-TTSSCEEEECEEEETTE-EE------ECCEEEEE
T ss_pred cCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccC-CCCEEEEEEeEEEECCE-ec------CCCceEEE
Confidence 99997 8999999763 3468999999999986 344444432 46799999999999993 32 23568999
Q ss_pred ecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEE
Q 016765 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (383)
Q Consensus 169 DSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~ 248 (383)
||||++++||+++|++|++++.+.+. +. ..|..+|+ . ..+|+|+|+| +|.++.|++++|++.
T Consensus 218 DSGTs~~~lP~~~~~~~~~~~~~~~~------~~-g~~~~~C~--------~--~~~p~i~f~f-~g~~~~ip~~~~~~~ 279 (325)
T 2apr_A 218 DTGTTLLILPNNIAASVARAYGASDN------GD-GTYTISCD--------T--SAFKPLVFSI-NGASFQVSPDSLVFE 279 (325)
T ss_dssp CTTCSSEEEEHHHHHHHHHHHTCEEC------SS-SCEEECSC--------G--GGCCCEEEEE-TTEEEEECGGGGEEE
T ss_pred ecCCccEECCHHHHHHHHHHHhcccC------CC-CeEEEECC--------C--CCCCcEEEEE-CCEEEEECHHHEEEc
Confidence 99999999999999999999965543 11 23445664 1 2589999999 566999999999987
Q ss_pred ecccCCeEEEEEEeCC-CCCeeeccEEEEeEEEEEECCCCEEEEecC
Q 016765 249 HMKVSGAYCLGIFQNS-DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (383)
Q Consensus 249 ~~~~~~~~Cl~~~~~~-~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~ 294 (383)
.. +..|+..+... .+.||||++|||++|+|||++++|||||++
T Consensus 280 ~~---~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 323 (325)
T 2apr_A 280 EF---QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPV 323 (325)
T ss_dssp EE---TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred CC---CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEec
Confidence 64 56898876543 678999999999999999999999999987
No 20
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=6.4e-42 Score=329.49 Aligned_cols=244 Identities=15% Similarity=0.244 Sum_probs=195.1
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCcC-CCcceEeecCCCCC---------chHHH
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYT-QRADGIMGLGRGRL---------SVVDQ 90 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~~-~~~dGIlGLg~~~~---------S~~~~ 90 (383)
..|.|.+.|++|+.++|.+++|+|+|++ ++++++.|||++.+++.+.. ...|||||||++.+ +++++
T Consensus 71 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 147 (329)
T 3c9x_A 71 SGASWSISYGDGSSSSGDVYTDKVTIGG---FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSN 147 (329)
T ss_dssp TTCBEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCeEEEEeCCCCcEEEEEEEEEEEECC---EEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHH
Confidence 4799999999999889999999999998 57889999999987765432 46899999999653 48899
Q ss_pred hHhcCCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCC-CCCceeEEEeEEEECCEEeeeCCceecCCCceE
Q 016765 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (383)
Q Consensus 91 L~~~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~i 167 (383)
|+++ |. ++||+||.+ ...|.|+|||+|+++ ...+.|.+.. ...+|.|.|++|.|+++.+. ..+..++
T Consensus 148 l~~~--i~~~~FS~~l~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~------~~~~~ai 217 (329)
T 3c9x_A 148 AASS--LAEPLFTADLRH--GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN------RNSIDGI 217 (329)
T ss_dssp HHTT--SSSSEEEEECCS--SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC------SCCEEEE
T ss_pred HHHh--cCCCEEEEEecC--CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc------CCCceEE
Confidence 9886 65 899999987 357999999999986 2334443332 46799999999999998663 1346899
Q ss_pred EecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEE
Q 016765 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (383)
Q Consensus 168 vDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~ 247 (383)
|||||++++||++++++|.+++..... ......|..+|+ ..+|+|+|+| +|.++.|++++|++
T Consensus 218 iDSGTt~~~lp~~~~~~i~~~i~~a~~-----~~~~~~~~~~C~-----------~~~P~i~f~f-~g~~~~ip~~~~~~ 280 (329)
T 3c9x_A 218 ADTGTTLLLLDDNVVDAYYANVQSAQY-----DNQQEGVVFDCD-----------EDLPSFSFGV-GSSTITIPGDLLNL 280 (329)
T ss_dssp ECTTCCSEEECHHHHHHHHTTCTTCEE-----ETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECGGGGEE
T ss_pred EECCCCcEeCCHHHHHHHHHhCCCcEE-----cCCCCEEEEECC-----------CCCCcEEEEE-CCEEEEECHHHeee
Confidence 999999999999999999988743221 111223445663 3689999999 69999999999998
Q ss_pred EecccCCeEEEEEEeCC--CCCeeeccEEEEeEEEEEECCCCEEEEecC
Q 016765 248 RHMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (383)
Q Consensus 248 ~~~~~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~ 294 (383)
.....+...|+..+... .+.||||++|||++|+|||++++|||||+.
T Consensus 281 ~~~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 281 TPLEEGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp EESSTTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred eccCCCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 76432347899865543 568999999999999999999999999973
No 21
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=4.7e-42 Score=330.44 Aligned_cols=242 Identities=18% Similarity=0.320 Sum_probs=195.0
Q ss_pred CceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCcC-CCcceEeecCCCCC---------chHHHh
Q 016765 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYT-QRADGIMGLGRGRL---------SVVDQL 91 (383)
Q Consensus 22 ~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~~-~~~dGIlGLg~~~~---------S~~~~L 91 (383)
.|.|.+.|++|+.++|.+++|+|+|++ +++.++.|||++.+++.+.. ...|||||||++.+ +++++|
T Consensus 71 ~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 147 (329)
T 1oew_A 71 GATWSISYGDGSSSSGDVYTDTVSVGG---LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNA 147 (329)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred CCeEEEEeCCCCcEEEEEEEEEEEECC---EEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHH
Confidence 689999999999889999999999998 57889999999987765432 46899999999654 488999
Q ss_pred HhcCCCC-CceEEeecCCCCCCCceeeCCCCCCC---CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceE
Q 016765 92 VEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP---DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (383)
Q Consensus 92 ~~~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~---~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~i 167 (383)
+++ |. ++||+||.+ ...|.|+|||+|+++ .+.++++.. ...+|.|.|++|.|+++.+.. .+..++
T Consensus 148 ~~~--i~~~~FS~~L~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~~v~l~~i~v~~~~~~~------~~~~ai 216 (329)
T 1oew_A 148 KAS--LDSPVFTADLGY--HAPGTYNFGFIDTTAYTGSITYTAVST-KQGFWEWTSTGYAVGSGTFKS------TSIDGI 216 (329)
T ss_dssp TTT--SSSSEEEEECCS--SSCEEEEESCCCTTSSSSCCEEEECBC-TTSSCEEEEEEEEETTSCCEE------EEEEEE
T ss_pred HHh--ccCcEEEEEccC--CCCeEEEEeccChHhcccceEEEEccC-CCceEEEEEeeEEECCeeccC------CCceEE
Confidence 887 65 899999987 357999999999987 344444432 467999999999999986631 245899
Q ss_pred EecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEE
Q 016765 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (383)
Q Consensus 168 vDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~ 247 (383)
|||||++++||++++++|.+++..... ......|..+|+ ..+|+|+|+| +|.++.|++++|++
T Consensus 217 iDSGTt~~~lP~~~~~~l~~~i~~a~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~ip~~~~~~ 279 (329)
T 1oew_A 217 ADTGTTLLYLPATVVSAYWAQVSGAKS-----SSSVGGYVFPCS-----------ATLPSFTFGV-GSARIVIPGDYIDF 279 (329)
T ss_dssp ECTTCCSEEECHHHHHHHHTTSTTCEE-----ETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEE
T ss_pred EeCCCCCEECCHHHHHHHHHhCCCcEE-----cCCCCEEEEECC-----------CCCCcEEEEE-CCEEEEECHHHeee
Confidence 999999999999999999988743221 111223445663 3689999999 89999999999998
Q ss_pred EecccCCeEEEEEEeCC--CCCeeeccEEEEeEEEEEEC-CCCEEEEecC
Q 016765 248 RHMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDR-GNDKVGFWKT 294 (383)
Q Consensus 248 ~~~~~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvvFD~-~~~rIGfa~~ 294 (383)
.....+...|+..+... .+.||||++|||++|+|||+ +++|||||+.
T Consensus 280 ~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 280 GPISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EESSTTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred eecCCCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 76332347899866543 56899999999999999999 9999999974
No 22
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=6.2e-42 Score=329.69 Aligned_cols=245 Identities=17% Similarity=0.288 Sum_probs=199.8
Q ss_pred CceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCcCCCcceEeecCCCCCc-------hHHHhHhc
Q 016765 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRLS-------VVDQLVEK 94 (383)
Q Consensus 22 ~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~~~~~dGIlGLg~~~~S-------~~~~L~~~ 94 (383)
.|.|++.|++|+. +|.+++|+|+|++ +++.++.|||++.+...+....++||||||++.++ ++++|+++
T Consensus 72 ~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~---~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~q 147 (330)
T 1yg9_A 72 GNVQVKFFDTGSA-VGRGIEDSLTISQ---LTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEE 147 (330)
T ss_dssp EEEEEEETTTEEE-EEEEEEEEEEETT---EEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHT
T ss_pred CCEEEEEECCceE-EEEEEEEEEEECC---EEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHHHHHhc
Confidence 4789999999975 9999999999998 57889999999988433444568999999998765 89999999
Q ss_pred CCCCCceEEeecCCCCC--CCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEecc
Q 016765 95 GVISDSFSLCYGGMDVG--GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (383)
Q Consensus 95 g~I~~~FSl~l~~~~~~--~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSG 171 (383)
|+|+++||+||++.... .|.|+|||+|+++ ...+.|++.....+|.|.|++|.|+++.+. ..+..++||||
T Consensus 148 g~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~------~~~~~aiiDSG 221 (330)
T 1yg9_A 148 NLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA------PAGTQAIIDTS 221 (330)
T ss_dssp TSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE------CTTCEEEECTT
T ss_pred CCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc------CCCcEEEEecC
Confidence 98888899999986322 7999999999987 344555544567899999999999998764 23568999999
Q ss_pred cceeeeCHHHHHHHHHHHHHHccccccccCCCCCC-ccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEEec
Q 016765 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNY-DDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM 250 (383)
Q Consensus 172 ts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~ 250 (383)
|++++||++++++|.+++++.... .+ ...| ..+|. .. ..+|+|+|+| +|.++.|++++|+++.
T Consensus 222 Ts~~~lP~~~~~~l~~~~~~~~~~----~g-~~~~~~~~C~--------~~-~~~p~i~f~f-gg~~~~l~~~~y~~~~- 285 (330)
T 1yg9_A 222 KAIIVGPKAYVNPINEAIGCVVEK----TT-TRRICKLDCS--------KI-PSLPDVTFVI-NGRNFNISSQYYIQQN- 285 (330)
T ss_dssp CSSEEEEHHHHHHHHHHHTCEEEE----CS-SCEEEEECGG--------GG-GGSCCEEEEE-TTEEEEECHHHHEEEE-
T ss_pred CccccCCHHHHHHHHHHhCCcccC----CC-ceEEEEEECC--------Cc-cccCcEEEEE-CCEEEEECHHHhcccC-
Confidence 999999999999999999654310 01 0023 34453 32 4799999999 7999999999999987
Q ss_pred ccCCeEEEEEEeC--CCCCeeeccEEEEeEEEEEECCCCEEEEecCC
Q 016765 251 KVSGAYCLGIFQN--SDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 251 ~~~~~~Cl~~~~~--~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~ 295 (383)
+..|+..+.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 286 ---~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 286 ---GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp ---TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 4579865553 25689999999999999999999999999873
No 23
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=8.6e-42 Score=343.33 Aligned_cols=264 Identities=23% Similarity=0.396 Sum_probs=206.2
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCC-CcCCCcceEeecCCCCCc------hHHHhHh
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRLS------VVDQLVE 93 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGIlGLg~~~~S------~~~~L~~ 93 (383)
..|+|.+.|++|+ ++|.+++|+|+|++ +++.++.|||++.+.+. |....+|||||||++.++ ++++|++
T Consensus 108 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~ 183 (478)
T 1qdm_A 108 NGKPAAIQYGTGS-IAGYFSEDSVTVGD---LVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIE 183 (478)
T ss_dssp CCCEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHHHHTT
T ss_pred CCcEEEEEcCCCC-eEEEEEEEEEEECC---eEECCEEEEEEEecCCcccccccccceecccccccccCCCCcHHHHHHH
Confidence 5799999999997 79999999999998 57889999999987654 334568999999998764 7899999
Q ss_pred cCCCC-CceEEeecCCC--CCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEe
Q 016765 94 KGVIS-DSFSLCYGGMD--VGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (383)
Q Consensus 94 ~g~I~-~~FSl~l~~~~--~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivD 169 (383)
+|+|+ ++||+||++.. ..+|.|+|||+|+++ ...+.|++.....||.|.|++|.|+++.+.+.. .+..++||
T Consensus 184 qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~----~~~~aiiD 259 (478)
T 1qdm_A 184 QGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCA----GGCAAIAD 259 (478)
T ss_dssp TTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCEEETTEECSTTT----TCEEEEEC
T ss_pred CCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEEEECCEEEeecC----CCceEEEc
Confidence 99998 89999998752 358999999999987 344555544467899999999999999876532 35689999
Q ss_pred cccceeeeCHHHHHHHHHHHHHHcc----------------------c---------cccc--cCC--------------
Q 016765 170 SGTTYAYLPGHAFAAFKDALIKETH----------------------V---------LKRI--RGP-------------- 202 (383)
Q Consensus 170 SGts~~~lP~~~~~~i~~~i~~~~~----------------------~---------~~~~--~~~-------------- 202 (383)
|||+++++|++++++|.++|++... . +... .+.
T Consensus 260 TGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~ 339 (478)
T 1qdm_A 260 SGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDE 339 (478)
T ss_dssp SSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC-------------------
T ss_pred CCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccccccccccccc
Confidence 9999999999999999999865310 0 0000 000
Q ss_pred -----CC-------------------------------CCccccccC------CcCCcccccCCCCeEEEEECCCeEEEE
Q 016765 203 -----DP-------------------------------NYDDICFSG------AGRDVSELSKTFPQVDMVFGNGQKLTL 240 (383)
Q Consensus 203 -----~~-------------------------------~~~~~C~~~------~~~~~~~~~~~~P~i~f~f~~g~~~~l 240 (383)
.. .....|+.. +.++|+.. ..+|+|+|+| +|+.|.|
T Consensus 340 ~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~-~~lP~i~f~~-gg~~~~l 417 (478)
T 1qdm_A 340 PVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSL-GSMPDIEFTI-GGKKFAL 417 (478)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGG-TTCCCEEEEE-TTEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccc-cccccEEEEE-CCEEEEE
Confidence 00 001345432 34677654 5899999999 7999999
Q ss_pred cCCceEEEecccCCeEEEEEEeCC------CCCeeeccEEEEeEEEEEECCCCEEEEecC
Q 016765 241 SPENYLFRHMKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (383)
Q Consensus 241 ~p~~yi~~~~~~~~~~Cl~~~~~~------~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~ 294 (383)
+|++|+++...+....|+..+... ++.||||+.|||++|+|||++++|||||++
T Consensus 418 ~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 418 KPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp CHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 999999987643346898866532 467999999999999999999999999986
No 24
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2.1e-41 Score=337.76 Aligned_cols=243 Identities=20% Similarity=0.276 Sum_probs=202.3
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEc----cCCCCcCCCcceEeecCCCCC------chHHH
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENL----ETGDLYTQRADGIMGLGRGRL------SVVDQ 90 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~----~s~~~~~~~~dGIlGLg~~~~------S~~~~ 90 (383)
..|.|.+.|++|+ ++|.+++|+|+|++ ++++ +.|||++. +++ +.....|||||||++.+ +++++
T Consensus 192 ~~~~f~i~YgdGs-~~G~~~~Dtv~igg---~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~~~~~~ 265 (451)
T 3qvc_A 192 DDTPVKLTSKAGT-ISGIFSKDLVTIGK---LSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSIDPYIVE 265 (451)
T ss_dssp EEEEEEEECSSEE-EEEEEEEEEEEETT---EEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCCCHHHH
T ss_pred CCCEEEEEECCCE-EEEEEEEEEEEECC---EEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCCCHHHH
Confidence 4799999999998 89999999999998 5777 99999988 666 55557899999999764 68999
Q ss_pred hHhcCCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEE
Q 016765 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (383)
Q Consensus 91 L~~~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~iv 168 (383)
|+++|+|+ ++||+||++.+...|.|+|||+|+++ ...+.|.+.....+|.|.++ |.|+++ . ..+..++|
T Consensus 266 L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~-~-------~~~~~aii 336 (451)
T 3qvc_A 266 LKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV-S-------SKKANVIL 336 (451)
T ss_dssp HHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE-E-------EEEEEEEE
T ss_pred HHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc-c-------CCCceEEE
Confidence 99999998 89999999876668999999999987 34555655557889999999 999998 1 12468999
Q ss_pred ecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEE
Q 016765 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (383)
Q Consensus 169 DSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~ 248 (383)
||||++++||++++++|.+++++... .....|..+| + ...+|+|+|+| +|.++.|++++|+.+
T Consensus 337 DSGTt~i~lP~~~~~~i~~~i~a~~~------~~~g~y~v~C--------~--~~~~P~itf~f-gg~~i~lp~~~yi~~ 399 (451)
T 3qvc_A 337 DSATSVITVPTEFFNQFVESASVFKV------PFLSLYVTTC--------G--NTKLPTLEYRS-PNKVYTLEPKQYLEP 399 (451)
T ss_dssp CTTBSSEEECHHHHHHHHTTTTCEEC------TTSSCEEEET--------T--CTTCCCEEEEE-TTEEEEECHHHHEEE
T ss_pred eCCCccccCCHHHHHHHHHHcCCeec------CCCCeEEeeC--------C--cCcCCcEEEEE-CCEEEEEcHHHheee
Confidence 99999999999999999998865432 1122344555 3 25899999999 799999999999998
Q ss_pred ecccCCeEEEEEEeCC---CCCeeeccEEEEeEEEEEECCCCEEEEecCC
Q 016765 249 HMKVSGAYCLGIFQNS---DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 249 ~~~~~~~~Cl~~~~~~---~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~ 295 (383)
....++..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 400 ~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 400 LENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp CTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 7643456898766554 3679999999999999999999999999974
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=4e-41 Score=323.38 Aligned_cols=243 Identities=16% Similarity=0.323 Sum_probs=196.3
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCcC-CCcceEeecCCCCC---------chHHH
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYT-QRADGIMGLGRGRL---------SVVDQ 90 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~~-~~~dGIlGLg~~~~---------S~~~~ 90 (383)
..|+|++.|++|+.++|.+++|+|+|++ ++++++.|||++.+++.+.. ...|||||||++.+ +++++
T Consensus 66 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~ 142 (325)
T 1ibq_A 66 SGYSWDISYGDGSSASGDVYRDTVTVGG---VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDT 142 (325)
T ss_dssp TTCBEEEECSSSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCEEEEEeCCCCEEEEEEEEeEEEECC---EEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHH
Confidence 5799999999999889999999999998 57889999999987765443 46899999999754 47899
Q ss_pred hHhcCCCC-CceEEeecCCCCCCCceeeCCCCCCC---CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCce
Q 016765 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP---DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGT 166 (383)
Q Consensus 91 L~~~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~---~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ 166 (383)
|+++ |. ++||+||.+. ..|.|+|||+|+++ .+.++++.. ...+|.|.|++|.|+++.+. ..+..+
T Consensus 143 l~~~--i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~w~v~l~~i~v~~~~~~------~~~~~a 211 (325)
T 1ibq_A 143 VKSQ--LDSPLFAVQLKHD--APGVYDFGYIDDSKYTGSITYTDADS-SQGYWGFSTDGYSIGDGSSS------SSGFSA 211 (325)
T ss_dssp HGGG--SSSSEEEEEEETT--EEEEEEESSCCGGGBSSCCEEEECBC-TTSSCEEEECEEEETTSCCB------SCCEEE
T ss_pred HHHh--cCCcEEEEEecCC--CCceEEECCcChhhccCceEEEEcCC-CCceEEEEECcEEECCeecc------CCCceE
Confidence 9987 55 8999999973 57999999999987 344444432 56799999999999998663 135689
Q ss_pred EEecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceE
Q 016765 167 VLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYL 246 (383)
Q Consensus 167 ivDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi 246 (383)
+|||||++++||++++++|.+++..... ......|..+|+ ..+|+|+|+| +|.++.|++++|+
T Consensus 212 iiDSGTt~~~lP~~~~~~i~~~i~~a~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~i~~~~~~ 274 (325)
T 1ibq_A 212 IADTGTTLILLDDEIVSAYYEQVSGAQE-----SYEAGGYVFSCS-----------TDLPDFTVVI-GDYKAVVPGKYIN 274 (325)
T ss_dssp EECTTCCSEEECHHHHHHHHTTSTTCBC-----CSSSSSCEEETT-----------CCCCCEEEEE-TTEEEEECHHHHE
T ss_pred EEeCCCCcEeCCHHHHHHHHHhCCCceE-----cCcCCeEEEEcC-----------CCCCcEEEEE-CCEEEEECHHHhc
Confidence 9999999999999999999988742211 011223444563 3789999999 8999999999999
Q ss_pred EEecccCCeEEEEEEeCC--CCCeeeccEEEEeEEEEEECCCCEEEEecC
Q 016765 247 FRHMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (383)
Q Consensus 247 ~~~~~~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~ 294 (383)
+.....+...|+..++.. .+.||||++|||++|+|||++++|||||++
T Consensus 275 ~~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 324 (325)
T 1ibq_A 275 YAPVSTGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQ 324 (325)
T ss_dssp EEESSTTCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred ccccCCCCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeC
Confidence 876432247899866543 568999999999999999999999999986
No 26
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=6.5e-41 Score=336.00 Aligned_cols=273 Identities=22% Similarity=0.343 Sum_probs=210.1
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCc-CCCcceEeecCCCCC--------chHHHh
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-TQRADGIMGLGRGRL--------SVVDQL 91 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~-~~~~dGIlGLg~~~~--------S~~~~L 91 (383)
..|.|.+.|++|+. +|.+++|+|+|++...+ ...+.|+++......+. ...+|||||||++.+ +++++|
T Consensus 125 ~~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~~-~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 202 (455)
T 3lpj_A 125 LRKGVYVPYTQGKW-EGELGTDLVSIPHGPNV-TVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 202 (455)
T ss_dssp EEEEEEEECSSCEE-EEEEEEEEEECTTSCSC-EEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred CCccEEEEeCCeEE-EEEEEEEEEEECCCcce-eeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHH
Confidence 37999999999985 99999999999863211 22467888887766554 356899999999653 689999
Q ss_pred HhcCCCCCceEEeecCC----------CCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCcee
Q 016765 92 VEKGVISDSFSLCYGGM----------DVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIF 160 (383)
Q Consensus 92 ~~~g~I~~~FSl~l~~~----------~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 160 (383)
+++++|+++||+||++. ....|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.++...+
T Consensus 203 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~ 282 (455)
T 3lpj_A 203 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEY 282 (455)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGG
T ss_pred HHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEcccccccc
Confidence 99999998999999853 2458999999999987 344555555567899999999999999988765433
Q ss_pred cCCCceEEecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCe----
Q 016765 161 DGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQ---- 236 (383)
Q Consensus 161 ~~~~~~ivDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~---- 236 (383)
....++|||||++++||++++++|.++|.+.........+....+..+|+...... +..+|+|+|+|+++.
T Consensus 283 -~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~----~~~~P~i~f~f~g~~~~~~ 357 (455)
T 3lpj_A 283 -NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTP----WNIFPVISLYLMGEVTNQS 357 (455)
T ss_dssp -GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCC----GGGSCCEEEEEECSSTTEE
T ss_pred -CCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCc----hhcCCcEEEEEcCCCcCce
Confidence 24689999999999999999999999999875311000000012357787543221 346999999995442
Q ss_pred -EEEEcCCceEEEecccC--CeEEEEE-EeCCCCCeeeccEEEEeEEEEEECCCCEEEEecCCcchhh
Q 016765 237 -KLTLSPENYLFRHMKVS--GAYCLGI-FQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELW 300 (383)
Q Consensus 237 -~~~l~p~~yi~~~~~~~--~~~Cl~~-~~~~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~C~~~~ 300 (383)
+|.|+|++|+.+..... ...|+++ ....++.||||++|||++|+|||++++|||||+++|....
T Consensus 358 ~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~ 425 (455)
T 3lpj_A 358 FRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHD 425 (455)
T ss_dssp EEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCC
T ss_pred EEEEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEeccccccc
Confidence 59999999999876432 2589863 2223678999999999999999999999999999998765
No 27
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.5e-40 Score=328.39 Aligned_cols=271 Identities=21% Similarity=0.348 Sum_probs=206.0
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCc-cEEEEeeEccCCCCc-CCCcceEeecCCCCC--------chHHH
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQ-RAVFGCENLETGDLY-TQRADGIMGLGRGRL--------SVVDQ 90 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~-~~~fG~~~~~s~~~~-~~~~dGIlGLg~~~~--------S~~~~ 90 (383)
..|.|.+.|++|+ ++|.+++|+|+|++.. ... .+.|+++....+.+. ....|||||||++.+ +++++
T Consensus 79 ~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~ 155 (402)
T 3vf3_A 79 LRKGVYVPYTQGK-WEGELGTDLVSIPHGP--NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDS 155 (402)
T ss_dssp EEEEEEEECSSCE-EEEEEEEEEEECTTSC--SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHH
T ss_pred CCCEEEEEECcEE-EEEEEEEEEEEECCcc--ccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHH
Confidence 3799999999998 5999999999998532 232 345788776665543 356899999999643 68999
Q ss_pred hHhcCCCCCceEEeecCC----------CCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCce
Q 016765 91 LVEKGVISDSFSLCYGGM----------DVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRI 159 (383)
Q Consensus 91 L~~~g~I~~~FSl~l~~~----------~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~ 159 (383)
|+++++|+++||+||++. ....|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.++...
T Consensus 156 L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~ 235 (402)
T 3vf3_A 156 LVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKE 235 (402)
T ss_dssp HHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGG
T ss_pred HHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccc
Confidence 999999998999999753 2457999999999987 34455555556789999999999999998876543
Q ss_pred ecCCCceEEecccceeeeCHHHHHHHHHHHHHHccccccccCC-CCCCccccccCCcCCcccccCCCCeEEEEECCCe--
Q 016765 160 FDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGP-DPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQ-- 236 (383)
Q Consensus 160 ~~~~~~~ivDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~-- 236 (383)
++ ...++|||||++++||++++++|.+++.+.... ...... ...+..+|+...... +..+|+|+|+|+++.
T Consensus 236 ~~-~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~~C~~~~~~~----~~~~P~i~f~f~g~~~~ 309 (402)
T 3vf3_A 236 YN-YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGFWLGEQLVCWQAGTTP----WNIFPVISLYLMGEVTN 309 (402)
T ss_dssp GG-SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT-SCCCTTGGGTCSCEEEETTCCC----GGGSCCEEEEEECSSTT
T ss_pred cC-CCeEEEECCCCcccCCHHHHHHHHHHHhhhccc-cccCccccccccccccccccch----HhhCCceEEEEecCCCC
Confidence 32 468999999999999999999999999987531 111111 012356786543221 347999999995432
Q ss_pred ---EEEEcCCceEEEecccC--CeEEEEE-EeCCCCCeeeccEEEEeEEEEEECCCCEEEEecCCcchhh
Q 016765 237 ---KLTLSPENYLFRHMKVS--GAYCLGI-FQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELW 300 (383)
Q Consensus 237 ---~~~l~p~~yi~~~~~~~--~~~Cl~~-~~~~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~C~~~~ 300 (383)
++.|+|++|+.+..... ...|+++ .....+.||||++|||++|+|||++++|||||+++|....
T Consensus 310 ~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~ 379 (402)
T 3vf3_A 310 QSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHD 379 (402)
T ss_dssp EEEEEEECHHHHEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBC
T ss_pred ceEEEEECHHHheehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccCccc
Confidence 69999999999875421 2589862 2223678999999999999999999999999999999764
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=9.1e-41 Score=327.87 Aligned_cols=270 Identities=23% Similarity=0.394 Sum_probs=204.2
Q ss_pred CceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCc-CCCcceEeecCCCCC--------chHHHhH
Q 016765 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-TQRADGIMGLGRGRL--------SVVDQLV 92 (383)
Q Consensus 22 ~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~-~~~~dGIlGLg~~~~--------S~~~~L~ 92 (383)
.|.|++.|++|+ ++|.+++|+|+|++.. .....+.|+++....+.+. ...+|||||||++.+ +++++|+
T Consensus 65 ~~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~ 142 (383)
T 2ewy_A 65 GFDVTVKYTQGS-WTGFVGEDLVTIPKGF-NTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLV 142 (383)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEETTTE-EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred CceEEEEECCcE-EEEEEEEEEEEECCCc-cceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHH
Confidence 699999999997 5999999999998742 1122467888766555443 246799999999654 5889999
Q ss_pred hcCCCCCceEEeecCC-------CCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCC
Q 016765 93 EKGVISDSFSLCYGGM-------DVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGH 164 (383)
Q Consensus 93 ~~g~I~~~FSl~l~~~-------~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~ 164 (383)
+++.|+++||+||++. ....|.|+|||+|+++ ...+.|.+.....+|.|.|++|.|+++.+.++...+. ..
T Consensus 143 ~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~-~~ 221 (383)
T 2ewy_A 143 TQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYN-AD 221 (383)
T ss_dssp HHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTT-SS
T ss_pred HccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccC-Cc
Confidence 9999988999999742 2458999999999886 3445555555568999999999999999877654332 45
Q ss_pred ceEEecccceeeeCHHHHHHHHHHHHHHcccccccc-CCCCCCccccccCCcCCcccccCCCCeEEEEECCC-----eEE
Q 016765 165 GTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIR-GPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNG-----QKL 238 (383)
Q Consensus 165 ~~ivDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g-----~~~ 238 (383)
.++|||||++++||++++++|.+++.+..... ... +....+...|+..... .+..+|+|+|+|+++ .++
T Consensus 222 ~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~C~~~~~~----~~~~~P~i~f~f~g~~~~~~~~~ 296 (383)
T 2ewy_A 222 KAIVDSGTTLLRLPQKVFDAVVEAVARASLIP-EFSDGFWTGSQLACWTNSET----PWSYFPKISIYLRDENSSRSFRI 296 (383)
T ss_dssp CEEECTTCSSEEEEHHHHHHHHHHHHHTTCSS-CCCHHHHHTSEEEEECSSSC----GGGGSCCEEEEEECSSTTEEEEE
T ss_pred cEEEEcCCccccCCHHHHHHHHHHHhhhcccc-cCccccccccccccccCCcc----cHhhCCcEEEEECCCCCCceEEE
Confidence 89999999999999999999999998865410 000 0001235678754321 124799999999643 479
Q ss_pred EEcCCceEEEeccc-CCeEEEEE-EeCCCCCeeeccEEEEeEEEEEECCCCEEEEecCCcchh
Q 016765 239 TLSPENYLFRHMKV-SGAYCLGI-FQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (383)
Q Consensus 239 ~l~p~~yi~~~~~~-~~~~Cl~~-~~~~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~C~~~ 299 (383)
.|++++|+.+.... .+..|+++ +...++.||||++|||++|+|||++++|||||+++|...
T Consensus 297 ~l~~~~yi~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 359 (383)
T 2ewy_A 297 TILPQLYIQPMMGAGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEI 359 (383)
T ss_dssp EECHHHHEEEECCCTTCSEEEEESEEEESSCEEECHHHHTTEEEEEETTTTEEEEEECTTCBS
T ss_pred EEChHHheeecccCCCCceeEEEEecCCCCcEEEChHHhCCeeEEEECCCCeEEEEeccCCCc
Confidence 99999999886421 25679852 333356899999999999999999999999999999853
No 29
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.8e-40 Score=327.11 Aligned_cols=270 Identities=23% Similarity=0.344 Sum_probs=205.1
Q ss_pred CceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCc-cEEEEeeEccCCCCc-CCCcceEeecCCCCC--------chHHHh
Q 016765 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQ-RAVFGCENLETGDLY-TQRADGIMGLGRGRL--------SVVDQL 91 (383)
Q Consensus 22 ~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~-~~~fG~~~~~s~~~~-~~~~dGIlGLg~~~~--------S~~~~L 91 (383)
.|.|++.|++|+. +|.+++|+|+|++. .... .+.|+++....+.+. ....|||||||++.+ +++++|
T Consensus 73 ~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g--~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l 149 (395)
T 2qp8_A 73 RKGVYVPYTQGKW-EGELGTDLVSIPHG--PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 149 (395)
T ss_dssp EEEEEEECSSCEE-EEEEEEEEEECTTS--CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred CceEEEEECCcEE-EEEEEeEEEEECCC--CCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHH
Confidence 6999999999975 99999999999842 2232 366887765554443 356799999999653 588999
Q ss_pred HhcCCCCCceEEeecCC----------CCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCcee
Q 016765 92 VEKGVISDSFSLCYGGM----------DVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIF 160 (383)
Q Consensus 92 ~~~g~I~~~FSl~l~~~----------~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 160 (383)
+++++|+++||+||++. ....|.|+|||+|+++ ...+.|.+.....+|.|.|++|.|+++.+.++...+
T Consensus 150 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~ 229 (395)
T 2qp8_A 150 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEY 229 (395)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGG
T ss_pred HHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCcccc
Confidence 99999998999999863 1367999999999987 344555554556899999999999999987765444
Q ss_pred cCCCceEEecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCC-----
Q 016765 161 DGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNG----- 235 (383)
Q Consensus 161 ~~~~~~ivDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g----- 235 (383)
+ ...++|||||++++||++++++|.++|.+.........+....+..+|+..... .+..+|+|+|+|+++
T Consensus 230 ~-~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~----~~~~~P~i~f~f~g~~~~~~ 304 (395)
T 2qp8_A 230 N-YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTT----PWNIFPVISLYLMGEVTNQS 304 (395)
T ss_dssp G-SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCC----CGGGSCCEEEEEECSSTTEE
T ss_pred C-CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccc----hHhhCCcEEEEEccCCCCce
Confidence 3 358999999999999999999999999887541100000001224678754321 234799999999654
Q ss_pred eEEEEcCCceEEEeccc--CCeEEEE-EEeCCCCCeeeccEEEEeEEEEEECCCCEEEEecCCcchh
Q 016765 236 QKLTLSPENYLFRHMKV--SGAYCLG-IFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (383)
Q Consensus 236 ~~~~l~p~~yi~~~~~~--~~~~Cl~-~~~~~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~C~~~ 299 (383)
.+|.|+|++|+.+.... ....|++ .+...++.||||++|||++|+|||++++|||||+++|...
T Consensus 305 ~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 371 (395)
T 2qp8_A 305 FRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 371 (395)
T ss_dssp EEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCC
T ss_pred EEEEECHHHhEeecccCCCCCceEEEEEecCCCCcEEEChHHhCCeeEEEECCCCEEEEEeccCCCC
Confidence 27999999999986531 2358974 3333357899999999999999999999999999999864
No 30
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.5e-40 Score=319.11 Aligned_cols=241 Identities=14% Similarity=0.245 Sum_probs=194.7
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCcC-CCcceEeecCCCCC---------chHHH
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYT-QRADGIMGLGRGRL---------SVVDQ 90 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~~-~~~dGIlGLg~~~~---------S~~~~ 90 (383)
+.|+|++.|++|+.++|.+++|+|+|++ ++++++.|||++.+++.+.. ...+||||||++.+ +++++
T Consensus 67 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~ 143 (323)
T 1izd_A 67 DGATWSISYGDGSSASGDVYKDKVTVGG---VSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDN 143 (323)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCeEEEEcCCCCeEEEEEEEEEEEECC---EEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHH
Confidence 3699999999999889999999999998 57889999999988765432 46899999999754 47899
Q ss_pred hHhcCCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCC-CCCceeEEEeEEEECCEEeeeCCceecCCCceE
Q 016765 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (383)
Q Consensus 91 L~~~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~i 167 (383)
|+++ |. ++||+||++. ..|.|+|||+|+++ ...+.|++.. ...+|.|.+++|.|++ .+. ..+..++
T Consensus 144 l~~~--i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~------~~~~~ai 212 (323)
T 1izd_A 144 VKSS--LSEPIFAVALKHN--APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS------SDSITGI 212 (323)
T ss_dssp HGGG--SSSSEEEEECCTT--SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE------CCCEEEE
T ss_pred HHHh--ccCcEEEEEccCC--CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc------CCCceEE
Confidence 9987 55 8999999873 57999999999987 3344444332 5679999999999999 442 2356899
Q ss_pred EecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEE
Q 016765 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (383)
Q Consensus 168 vDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~ 247 (383)
|||||++++||++++++|.+++..... ......|..+|+ ..+|+|+|+| +|+++.|++++|++
T Consensus 213 iDSGTs~~~lp~~~~~~i~~~i~ga~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~i~~~~~~~ 275 (323)
T 1izd_A 213 ADTGTTLLLLDDSIVDAYYEQVNGASY-----DSSQGGYVFPSS-----------ASLPDFSVTI-GDYTATVPGEYISF 275 (323)
T ss_dssp ECTTCCSEEECHHHHHHHHTTSTTCEE-----ETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEE
T ss_pred EeCCCcceeCCHHHHHHHHHhCCCcEE-----cCcCCEEEEECC-----------CCCceEEEEE-CCEEEecCHHHeEE
Confidence 999999999999999999988742211 011223444563 3789999999 89999999999998
Q ss_pred EecccCCeEEEEEEeCC--CCCeeeccEEEEeEEEEEECCCCEEEEecC
Q 016765 248 RHMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (383)
Q Consensus 248 ~~~~~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~ 294 (383)
... ++..|+..+... .+.||||++|||++|+|||++++|||||++
T Consensus 276 ~~~--~~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 276 ADV--GNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp EEC--STTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ecC--CCCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 764 256899855543 568999999999999999999999999986
No 31
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.5e-40 Score=319.05 Aligned_cols=240 Identities=16% Similarity=0.319 Sum_probs=193.6
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCcC-CCcceEeecCCCCC---------chHHH
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYT-QRADGIMGLGRGRL---------SVVDQ 90 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~~-~~~dGIlGLg~~~~---------S~~~~ 90 (383)
..|+|++.|++|+.++|.+++|+|+|++ ++++++.|||++.+++.+.. ...|||||||++.+ +++++
T Consensus 67 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 143 (323)
T 1bxo_A 67 SGYTWSISYGDGSSASGNVFTDSVTVGG---VTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDT 143 (323)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCeEEEEeCCCCeEEEEEEEEEEEECC---EEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHH
Confidence 4699999999999889999999999998 57889999999987665443 46899999999643 48899
Q ss_pred hHhcCCCC-CceEEeecCCCCCCCceeeCCCCCCC---CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCce
Q 016765 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP---DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGT 166 (383)
Q Consensus 91 L~~~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~---~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ 166 (383)
|+++ |. ++||+||++ ...|.|+|||+|+++ .+.++++.. ...+|.|.|++|.|++ +. ..+..+
T Consensus 144 l~~~--i~~~~FS~~L~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~w~v~l~~i~v~~--~~------~~~~~a 210 (323)
T 1bxo_A 144 VKSS--LAQPLFAVALKH--QQPGVYDFGFIDSSKYTGSLTYTGVDN-SQGFWSFNVDSYTAGS--QS------GDGFSG 210 (323)
T ss_dssp HGGG--BSSSEEEEECCS--SSCEEEEESSCCGGGBSSCCEEEECBC-TTSSCEEEEEEEEETT--EE------EEEEEE
T ss_pred HHHh--cCCcEEEEEEeC--CCCceEEEeCcChhhccCceEEEECCC-CCCeEEEEEeeEEECC--cc------CCCceE
Confidence 9987 55 899999987 357999999999986 344444432 5679999999999999 21 134589
Q ss_pred EEecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceE
Q 016765 167 VLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYL 246 (383)
Q Consensus 167 ivDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi 246 (383)
+|||||++++||++++++|.++|..... ......|..+|+ ..+|+|+|+| +|.++.|++++|+
T Consensus 211 iiDSGTs~~~lP~~~~~~l~~~i~~a~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~l~~~~~~ 273 (323)
T 1bxo_A 211 IADTGTTLLLLDDSVVSQYYSQVSGAQQ-----DSNAGGYVFDCS-----------TNLPDFSVSI-SGYTATVPGSLIN 273 (323)
T ss_dssp EECTTCSSEEECHHHHHHHHTTSTTCEE-----ETTTTEEEECTT-----------CCCCCEEEEE-TTEEEEECHHHHE
T ss_pred EEeCCCCceeCCHHHHHHHHHhCCCceE-----cCcCCEEEEECC-----------CCCceEEEEE-CCEEEEECHHHeE
Confidence 9999999999999999999988743221 011223444563 3789999999 8999999999999
Q ss_pred EEecccCCeEEEEEEeCC--CCCeeeccEEEEeEEEEEECCCCEEEEecC
Q 016765 247 FRHMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (383)
Q Consensus 247 ~~~~~~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~ 294 (383)
+.... +...|+..+... .+.||||++|||++|+|||++++|||||++
T Consensus 274 ~~~~~-~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 274 YGPSG-DGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp EEECS-SSSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred EeccC-CCCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecC
Confidence 87643 236898866543 568999999999999999999999999986
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.9e-40 Score=319.26 Aligned_cols=263 Identities=18% Similarity=0.288 Sum_probs=201.4
Q ss_pred ccccCCCCCCCCC--CCCCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCCCcCCCcceEeecCCC
Q 016765 6 QALKCNPDCNCDN--DRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRG 83 (383)
Q Consensus 6 ~~~~C~~~c~C~~--~~~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~~~~~~~dGIlGLg~~ 83 (383)
-++.|....++.. ....|.|.+.|++|+ ++|.+++|+|+|++ +++.++.|||++.+.+ +. .++||||||++
T Consensus 38 lWv~~~~~y~~s~Ss~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~~g~---~~v~~~~fg~~~~~~~-~~--~~~GilGLg~~ 110 (340)
T 1wkr_A 38 TWLGADKSYVKTSTSSATSDKVSVTYGSGS-FSGTEYTDTVTLGS---LTIPKQSIGVASRDSG-FD--GVDGILGVGPV 110 (340)
T ss_dssp CEECSSSCCCCCTTCEEEEEEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEEES-CT--TCSEEEECSCG
T ss_pred heecCCCccCCcCCccccCceEEEEECCcE-EEEEEEEEEEEECC---EEEcceEEEEEEccCC-Cc--CCCcEEECCcc
Confidence 3466764222221 134799999999997 79999999999998 5788999999998765 32 58999999996
Q ss_pred CC--------------chHHHhHhcCCCC-CceEEeecCC---CCCCCceeeCCCCCCC---CceeeecCCC--CCCcee
Q 016765 84 RL--------------SVVDQLVEKGVIS-DSFSLCYGGM---DVGGGAMVLGGITPPP---DMVFSHSDPF--RSPYYN 140 (383)
Q Consensus 84 ~~--------------S~~~~L~~~g~I~-~~FSl~l~~~---~~~~G~l~fGg~d~~~---~~~~~~~~~~--~~~~w~ 140 (383)
.+ +++++|+++|+|+ ++||+||.+. ....|.|+|||+|+++ .+.++++... ...+|.
T Consensus 111 ~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~ 190 (340)
T 1wkr_A 111 DLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWG 190 (340)
T ss_dssp GGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSE
T ss_pred ccccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEE
Confidence 53 5799999999998 8999999864 2347999999999876 3344444321 167999
Q ss_pred EEEeEEEECC-EEeeeCCceecCCCceEEecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCcCCcc
Q 016765 141 IELKELRVAG-KPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVS 219 (383)
Q Consensus 141 v~l~~i~v~~-~~~~~~~~~~~~~~~~ivDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 219 (383)
|. ++|.|++ +.+.. +..++|||||++++||++++++|.+++++... .....+..+|.
T Consensus 191 v~-~~i~v~~~~~l~~-------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~------~~~g~~~~~C~-------- 248 (340)
T 1wkr_A 191 IN-QSIRYGSSTSILS-------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD------NNTGLLRLTTA-------- 248 (340)
T ss_dssp EE-EEEEETTTEEEEE-------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC------TTTSSEEECHH--------
T ss_pred EE-eeEEECCCeEccC-------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc------CCCCeEEeecc--------
Confidence 99 9999998 77641 24799999999999999999999988865432 11123344553
Q ss_pred cccCCCCeEEEEECCCeEEEEcCCceEEEeccc-----CCeEEEEEEeC-C-----CCCeeeccEEEEeEEEEEECCCCE
Q 016765 220 ELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV-----SGAYCLGIFQN-S-----DSTTLLGGIVVRNTLVTYDRGNDK 288 (383)
Q Consensus 220 ~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~~~-----~~~~Cl~~~~~-~-----~~~~ILG~~Flr~~yvvFD~~~~r 288 (383)
.. ..+|+|+|+| +|.++.|+|++|+++.... ....|+..+.. . +..||||++|||++|+|||++++|
T Consensus 249 ~~-~~~p~i~f~f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~ 326 (340)
T 1wkr_A 249 QY-ANLQSLFFTI-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKR 326 (340)
T ss_dssp HH-HTCCCEEEEE-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTE
T ss_pred cc-ccCCcEEEEE-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCe
Confidence 22 4789999999 7899999999999865421 12456544432 1 246999999999999999999999
Q ss_pred EEEecCCcchh
Q 016765 289 VGFWKTNCSEL 299 (383)
Q Consensus 289 IGfa~~~C~~~ 299 (383)
||||+++|...
T Consensus 327 igfA~~~~~~~ 337 (340)
T 1wkr_A 327 LGLATTSFTTA 337 (340)
T ss_dssp EEEEECTTTTC
T ss_pred EEEEecCCCCC
Confidence 99999998754
No 33
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=9.8e-41 Score=332.68 Aligned_cols=243 Identities=23% Similarity=0.303 Sum_probs=198.5
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccC--CC-CcCCCcceEeecCCCCC------chHHHh
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLET--GD-LYTQRADGIMGLGRGRL------SVVDQL 91 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s--~~-~~~~~~dGIlGLg~~~~------S~~~~L 91 (383)
..|+|.+.|++|+ ++|.+++|+|+|++ ++++ +.|||++.++ +. +.....|||||||++.+ +++++|
T Consensus 193 ~~~~~~i~YgdGs-~~G~~~~Dtv~ig~---~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L 267 (453)
T 2bju_A 193 DGTKVEMNYVSGT-VSGFFSKDLVTVGN---LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVEL 267 (453)
T ss_dssp EEEEEEEECSSSE-EEEEEEEEEEEETT---EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHH
T ss_pred CCcEEEEEcCCCC-eEEEEEEEEEEEeC---cEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHH
Confidence 3699999999998 79999999999998 5777 9999999887 54 33456899999999754 589999
Q ss_pred HhcCCCC-CceEEeecCCCCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEe
Q 016765 92 VEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (383)
Q Consensus 92 ~~~g~I~-~~FSl~l~~~~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivD 169 (383)
+++|+|. ++||+||++.+..+|.|+|||+|+++ ...+.|++.....+|.|.++ |.|++ .+ + .+..++||
T Consensus 268 ~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~-~------~~~~aIiD 338 (453)
T 2bju_A 268 KNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM-L------EKANCIVD 338 (453)
T ss_dssp HHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE-E------EEEEEEEC
T ss_pred HHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE-e------ccccEEEc
Confidence 9999997 89999999865568999999999987 34455554455789999999 99999 33 1 24589999
Q ss_pred cccceeeeCHHHHHHHHHHHHHHccccccccCCCC-CCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEE
Q 016765 170 SGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDP-NYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (383)
Q Consensus 170 SGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~ 248 (383)
|||++++||++++++|.+++.+.. .... .|..+|+. ..+|+|+|+| +|.++.|+|++|+++
T Consensus 339 SGTsl~~lP~~~~~~l~~~i~~~~-------~~~g~~~~v~C~~----------~~~P~itf~f-gg~~~~l~~~~yi~~ 400 (453)
T 2bju_A 339 SGTSAITVPTDFLNKMLQNLDVIK-------VPFLPFYVTLCNN----------SKLPTFEFTS-ENGKYTLEPEYYLQH 400 (453)
T ss_dssp TTCCSEEECHHHHHHHTTTSSCEE-------CTTSSCEEEETTC----------TTCCCEEEEC-SSCEEEECHHHHEEE
T ss_pred CCCCeEecCHHHHHHHHHHhCCcc-------cCCCceEEEecCC----------CCCCcEEEEE-CCEEEEECHHHhEee
Confidence 999999999999999998875421 1111 34556742 4799999999 799999999999998
Q ss_pred ecccCCeEEEEEEeCC---CCCeeeccEEEEeEEEEEECCCCEEEEecCC
Q 016765 249 HMKVSGAYCLGIFQNS---DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 249 ~~~~~~~~Cl~~~~~~---~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~~ 295 (383)
....+...|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 401 ~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 401 IEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 7532346898655544 3589999999999999999999999999974
No 34
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=3e-39 Score=297.37 Aligned_cols=222 Identities=24% Similarity=0.439 Sum_probs=179.7
Q ss_pred CCCccEEEEeeEccCCC-CcCCCcceEeecCCCCC------chHHHhHhcCCCC-CceEEeecCCCCC--CCceeeCCCC
Q 016765 52 LVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEKGVIS-DSFSLCYGGMDVG--GGAMVLGGIT 121 (383)
Q Consensus 52 ~~~~~~~fG~~~~~s~~-~~~~~~dGIlGLg~~~~------S~~~~L~~~g~I~-~~FSl~l~~~~~~--~G~l~fGg~d 121 (383)
++++++.|||++.+++. +....+|||||||++.+ +++++|+++|+|. ++||+||++.... .|.|+|||+|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 56789999999988764 44567899999999765 5899999999997 8999999986433 8999999999
Q ss_pred CCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEecccceeeeCHHHHHHHHHHHHHHcccccccc
Q 016765 122 PPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIR 200 (383)
Q Consensus 122 ~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~ 200 (383)
+++ ...+.|++.....+|.|.+++|.|+++.+. ...+..++|||||+++++|++++++|.+++++...
T Consensus 83 ~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-----~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------ 151 (241)
T 1lya_B 83 SKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-----CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL------ 151 (241)
T ss_dssp GGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-----STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE------
T ss_pred HHHcCCceEEEECccccEEEEEEeEEEECCeeEe-----ccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec------
Confidence 987 345555555567899999999999998652 12456899999999999999999999999865432
Q ss_pred CCCCCCccccccCCcCCcccccCCCCeEEEEECCCeEEEEcCCceEEEecccCCeEEEEEEeC------CCCCeeeccEE
Q 016765 201 GPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQN------SDSTTLLGGIV 274 (383)
Q Consensus 201 ~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~~~~~~~Cl~~~~~------~~~~~ILG~~F 274 (383)
....|..+|+. . ..+|+|+|+| +|++++|++++|+++....+...|+..+.. ..+.||||++|
T Consensus 152 -~~g~~~~~C~~--------~-~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~f 220 (241)
T 1lya_B 152 -IQGEYMIPCEK--------V-STLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVF 220 (241)
T ss_dssp -ETTEEEEEGGG--------G-GGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHH
T ss_pred -cCCcEEEECCC--------C-ccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHH
Confidence 12234556642 2 4799999999 799999999999998764335689864443 24689999999
Q ss_pred EEeEEEEEECCCCEEEEecCC
Q 016765 275 VRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 275 lr~~yvvFD~~~~rIGfa~~~ 295 (383)
||++|+|||++++|||||+++
T Consensus 221 l~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 221 IGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp HTTEEEEEETTTTEEEEEEEC
T ss_pred hcceEEEEECCCCEEEEEEcC
Confidence 999999999999999999863
No 35
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.94 E-value=1.3e-27 Score=219.47 Aligned_cols=162 Identities=21% Similarity=0.310 Sum_probs=136.1
Q ss_pred CceeEEEeCCCCeEEEEEEEEEEEeCCCCCCCCccEEEEeeEccCCC-CcCCCcceEeecCCCCCc--hHHHhHhcCCCC
Q 016765 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRLS--VVDQLVEKGVIS 98 (383)
Q Consensus 22 ~C~~~i~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGIlGLg~~~~S--~~~~L~~~g~I~ 98 (383)
.|.|.+.|++|+ ++|.+++|+|+|++ +++.++.|||+..+.+. |....+|||||||++.++ ++++|+++|+|.
T Consensus 70 ~~~~~i~Yg~Gs-~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~qg~i~ 145 (239)
T 1b5f_A 70 GTFGAIIYGTGS-ITGFFSQDSVTIGD---LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQGLVK 145 (239)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHHTTCCS
T ss_pred CcEEEEEECCCc-EEEEEEEEEEEECC---cEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHHCCCCC
Confidence 589999999997 79999999999998 57889999999887643 444568999999998875 789999999997
Q ss_pred -CceEEeecCC--CCCCCceeeCCCCCCC-CceeeecCCCCCCceeEEEeEEEECCEEeeeCCceecCCCceEEecccce
Q 016765 99 -DSFSLCYGGM--DVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTY 174 (383)
Q Consensus 99 -~~FSl~l~~~--~~~~G~l~fGg~d~~~-~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSGts~ 174 (383)
++||+||++. ....|.|+|||+|+++ ...+.|++.....+|.|.|++|.|+++.+.+.. .+..++|||||++
T Consensus 146 ~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~----~~~~aiiDTGTt~ 221 (239)
T 1b5f_A 146 ERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCA----PGCQAFADSGTSL 221 (239)
T ss_dssp SSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTT----TCEEEEECTTCSS
T ss_pred CCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccC----CCCEEEEecCcch
Confidence 8999999875 2458999999999987 334455444456799999999999999876543 3468999999999
Q ss_pred eeeCHHHHHHHHHHHHH
Q 016765 175 AYLPGHAFAAFKDALIK 191 (383)
Q Consensus 175 ~~lP~~~~~~i~~~i~~ 191 (383)
++||++++++|.++|++
T Consensus 222 ~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 222 LSGPTAIVTQINHAIGA 238 (239)
T ss_dssp EEECHHHHHHHHHHTTC
T ss_pred hhCCHHHHHHHHHHhCC
Confidence 99999999999998853
No 36
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.67 E-value=2.3e-17 Score=126.99 Aligned_cols=76 Identities=29% Similarity=0.541 Sum_probs=63.5
Q ss_pred CcccccCCCCeEEEEECCCeEEEEcCCceEEEecccCCeEEEEEEeC-----CCCCeeeccEEEEeEEEEEECCCCEEEE
Q 016765 217 DVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQN-----SDSTTLLGGIVVRNTLVTYDRGNDKVGF 291 (383)
Q Consensus 217 ~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~~~~~~~Cl~~~~~-----~~~~~ILG~~Flr~~yvvFD~~~~rIGf 291 (383)
+|+.. ..+|+|+|+| +|+++.|+|++|+.+....+...|+..++. ..+.||||+.|||++|+|||++++||||
T Consensus 6 ~C~~~-~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGf 83 (87)
T 1b5f_B 6 DCNTL-SSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGF 83 (87)
T ss_dssp CGGGG-GGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEE
T ss_pred ECCCC-CcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEE
Confidence 44443 4799999999 799999999999998754334689976654 2457999999999999999999999999
Q ss_pred ecC
Q 016765 292 WKT 294 (383)
Q Consensus 292 a~~ 294 (383)
|++
T Consensus 84 A~~ 86 (87)
T 1b5f_B 84 AEA 86 (87)
T ss_dssp EEE
T ss_pred EEc
Confidence 986
No 37
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=96.62 E-value=0.0013 Score=50.59 Aligned_cols=27 Identities=26% Similarity=0.324 Sum_probs=24.7
Q ss_pred CCceeEEEeCCCCeEEEEEEEEEEEeCC
Q 016765 21 KECIYERRYAEMSTSSGVLGVDVISFGN 48 (383)
Q Consensus 21 ~~C~~~i~Y~~g~~~~G~~~~D~v~l~~ 48 (383)
..|.|.+.|++|+ ++|.+++|+|+|++
T Consensus 70 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 70 NGTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred CCCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 3699999999998 79999999999987
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=94.76 E-value=0.019 Score=47.60 Aligned_cols=114 Identities=18% Similarity=0.268 Sum_probs=64.9
Q ss_pred CCceeEEEeEEEECCEEeeeCCceecCCCceEEecccceeeeCHHHHHHHHHHHHHHccccccccCCCCCCccccccCCc
Q 016765 136 SPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAG 215 (383)
Q Consensus 136 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSGts~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~ 215 (383)
...+.|+ +.|||+.+ .++||||.+.+.++.+..+++- +..... .+..+ .. .+
T Consensus 22 ~~~l~v~---~~Ing~~v-----------~~LVDTGAs~s~Is~~~A~rlG--L~~~~~--~~~~~------~a----~g 73 (148)
T 3s8i_A 22 VTMLYIN---CKVNGHPL-----------KAFVDSGAQMTIMSQACAERCN--IMRLVD--RRWAG------VA----KG 73 (148)
T ss_dssp CCCCEEE---EEETTEEE-----------EEEECTTCSSCEEEHHHHHHTT--CGGGEE--GGGCE------EC----CC
T ss_pred cCEEEEE---EEECCEEE-----------EEEEeCCCCcEeeCHHHHHHcC--CccccC--cceeE------EE----Ec
Confidence 3345555 45888877 5799999999999999888762 100000 00000 00 00
Q ss_pred CCcccccCCCCeEEEEECCCeEEEEcCCceEEEecccCCeEEEEEEeCCCCCeeeccEEEEeEEEEEECCCCEEEEecC
Q 016765 216 RDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (383)
Q Consensus 216 ~~~~~~~~~~P~i~f~f~~g~~~~l~p~~yi~~~~~~~~~~Cl~~~~~~~~~~ILG~~Flr~~yvvFD~~~~rIGfa~~ 294 (383)
..-...........+++ ++..+. +-+.++...+...|||..||+++-.+.|+.++++-|...
T Consensus 74 ~G~~~~~g~v~~~~I~I-g~~~~~----------------~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 74 VGTQRIIGRVHLAQIQI-EGDFLQ----------------CSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp ---CEEEEEEEEEEEEE-TTEEEE----------------EEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred CCccEEEEEEEEEEEEE-CCEEEE----------------EEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 00000001233344555 333211 113333333456899999999999999999999999764
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.79 E-value=0.07 Score=43.89 Aligned_cols=28 Identities=14% Similarity=0.171 Sum_probs=25.5
Q ss_pred CCeeeccEEEEeEEEEEECCCCEEEEec
Q 016765 266 STTLLGGIVVRNTLVTYDRGNDKVGFWK 293 (383)
Q Consensus 266 ~~~ILG~~Flr~~yvvFD~~~~rIGfa~ 293 (383)
...|||..||+++-+++|+.++++-|..
T Consensus 108 ~d~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 108 IDVLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp CSEEECHHHHHHTTCEEETTTTEEEETT
T ss_pred CCeEecHHHHhhCCEEEECCCCEEEEcc
Confidence 4589999999999999999999999963
No 40
>2pmp_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; plant enzymes, MEP pathway, isoprenoid proteins, CMP, zinc IONS, lyase; HET: C5P; 2.30A {Arabidopsis thaliana}
Probab=62.86 E-value=9 Score=31.63 Aligned_cols=41 Identities=20% Similarity=0.382 Sum_probs=35.1
Q ss_pred CceEEEEEEEEEEeeecCCCCCcchhHHHHHHhhhcccCcCCC
Q 016765 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEV 383 (383)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (383)
...+|+++ ++.+.....++.|+..+..+.||.-|+++.+||
T Consensus 90 ~G~~i~Nv--D~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V 130 (160)
T 2pmp_A 90 AGYEIGNL--DATLILQRPKISPHKETIRSNLSKLLGADPSVV 130 (160)
T ss_dssp HTEEEEEE--EEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGE
T ss_pred cCCEEEEE--EEEEEecCCcCHHHHHHHHHHHHHHHCCCcceE
Confidence 36788887 455567899999999999999999999998875
No 41
>3re3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; structural genomics, center for structural genomics of infec diseases, csgid; 2.65A {Francisella tularensis subsp} SCOP: d.79.5.0
Probab=62.70 E-value=8.1 Score=31.96 Aligned_cols=41 Identities=17% Similarity=0.346 Sum_probs=35.1
Q ss_pred CceEEEEEEEEEEeeecCCCCCcchhHHHHHHhhhcccCcCCC
Q 016765 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEV 383 (383)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (383)
...+|+++ ++.+.....+++|+..+..+.||.-|+++.+||
T Consensus 93 ~G~~i~Nv--D~tii~q~PKl~p~~~~m~~~la~~L~~~~~~V 133 (162)
T 3re3_A 93 KQYSISNI--DCTIIAQAPKMLPHIEKMRACLANILEIQISQI 133 (162)
T ss_dssp TTCEEEEE--EEEEECSSSCCGGGHHHHHHHHHHHHTSCGGGE
T ss_pred cCCEEEEE--EEEEEcCCCcchhHHHHHHHHHHHHHCCCCceE
Confidence 35778877 566678899999999999999999999998775
No 42
>1t0a_A 2C-methyl-D-erythritol 2,4-cyclodiphosphate synth; mixed alpha beta, homotrimer, synthase, lyase; HET: FPP; 1.60A {Shewanella oneidensis} SCOP: d.79.5.1 PDB: 1vh8_A* 1vha_A* 1jn1_A 3fpi_A* 3f6m_A*
Probab=62.47 E-value=10 Score=31.30 Aligned_cols=41 Identities=20% Similarity=0.527 Sum_probs=35.3
Q ss_pred CceEEEEEEEEEEeeecCCCCCcchhHHHHHHhhhcccCcCCC
Q 016765 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEV 383 (383)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (383)
...+|+++ ++.+.....++.|+..+..+.||.-|+++.+||
T Consensus 89 ~G~~i~Nv--D~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V 129 (159)
T 1t0a_A 89 KGFELGNL--DVTIIAQAPKMAPHIEDMRQVLAADLNADVADI 129 (159)
T ss_dssp TTEEEEEE--EEEEECSSSCCGGGHHHHHHHHHHHTTCCGGGE
T ss_pred cCCEEEEE--EEEEEcCCCcChHHHHHHHHHHHHHhCCCCceE
Confidence 46788887 455568999999999999999999999998775
No 43
>1gx1_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, lyase, isoprene biosynthesis; HET: CDP; 1.8A {Escherichia coli} SCOP: d.79.5.1 PDB: 1h47_A* 1h48_A* 3ern_A* 3eor_A* 3elc_A* 3esj_A* 3fba_A* 2amt_A* 1knj_A* 1knk_A 1u3l_A* 1u3p_A 1u40_A* 1u43_A* 1jy8_A* 2gzl_A* 1yqn_A* 3ghz_A* 3t80_A*
Probab=60.64 E-value=10 Score=31.31 Aligned_cols=41 Identities=22% Similarity=0.454 Sum_probs=35.1
Q ss_pred CceEEEEEEEEEEeeecCCCCCcchhHHHHHHhhhcccCcCCC
Q 016765 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEV 383 (383)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (383)
...+|+++ ++.+.....++.|+..+..+.||.-|+++.+||
T Consensus 88 ~G~~i~Nv--D~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V 128 (160)
T 1gx1_A 88 KGYTLGNV--DVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDV 128 (160)
T ss_dssp TTCEEEEE--EEEEECSSSCCGGGHHHHHHHHHHHTTCCGGGE
T ss_pred cCCEEEEE--EEEEEcCCCcchHHHHHHHHHHHHHhCCCCceE
Confidence 36778887 455568999999999999999999999998875
No 44
>3f0d_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; ssgcid, niaid, isoprene biosynthe lyase, metal-binding, structural genomics; 1.20A {Burkholderia pseudomallei} PDB: 3f0e_A 3f0f_A* 3f0g_A* 3ieq_A* 3iew_A* 3jvh_A* 3k14_A* 3k2x_A* 3ke1_A* 3mbm_A* 3p0z_A* 3p10_A* 3q8h_A* 3qhd_A* 3ikf_A* 3ike_A*
Probab=60.05 E-value=11 Score=31.87 Aligned_cols=41 Identities=20% Similarity=0.310 Sum_probs=35.4
Q ss_pred CceEEEEEEEEEEeeecCCCCCcchhHHHHHHhhhcccCcCCC
Q 016765 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEV 383 (383)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (383)
...+|++| ++.+.....+++|+..+..+.||.-|+++.+||
T Consensus 110 ~G~~I~Nv--D~tIiaq~PKl~p~~~~mr~~la~~L~i~~~~V 150 (183)
T 3f0d_A 110 AGFAIRNV--DSTIIAQAPKLAPHIDAMRANIAADLDLPLDRV 150 (183)
T ss_dssp TTEEEEEE--EEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGE
T ss_pred cCCEEEEE--EEEEEcCCCcchhHHHHHHHHHHHHHCCCcceE
Confidence 46778887 566678899999999999999999999998775
No 45
>3b6n_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; malaria isoprenoid biosynthesis and prenylation pathways ISPF; 2.26A {Plasmodium vivax sai-1}
Probab=54.61 E-value=11 Score=31.77 Aligned_cols=41 Identities=17% Similarity=0.290 Sum_probs=35.5
Q ss_pred CceEEEEEEEEEEeeecCCCCCcchhHHHHHHhhhcccCcCCC
Q 016765 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEV 383 (383)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (383)
...+||.| ++.+.....++.|+..+..+.||.-|+++.+||
T Consensus 115 ~Gy~I~Nv--D~tiiaq~PKi~p~~~~m~~nia~~L~i~~~~V 155 (187)
T 3b6n_A 115 RNYAIANV--DIIVIAEVPKISPIREEIVRNISSALGISESQV 155 (187)
T ss_dssp TTEEEEEE--EEEEECSSSCSHHHHHHHHHHHHHHHTCCGGGE
T ss_pred cCCEEEEE--EEEEEeCCCcchHHHHHHHHHHHHHhCCCcceE
Confidence 36788888 555678899999999999999999999998876
No 46
>1iv3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, non-mevalonate, riken structural genomics/proteomics initiative, RSGI; 1.52A {Thermus thermophilus} SCOP: d.79.5.1 PDB: 1iv2_A 1iv4_A* 1iv1_A
Probab=50.57 E-value=16 Score=29.88 Aligned_cols=41 Identities=7% Similarity=0.214 Sum_probs=34.8
Q ss_pred CceEEEEEEEEEEeeecCCCCCcchhHHHHHHhhhcccCcCCC
Q 016765 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEV 383 (383)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (383)
...+|+++ ++.+.....++.|+..+..+.||.-|+++.+||
T Consensus 87 ~G~~i~Nv--D~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V 127 (152)
T 1iv3_A 87 RGAKLLQA--SLVLTLDRPKLGPHRKALVDSLSRLMRLPQDRI 127 (152)
T ss_dssp TTCCEEEE--EEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGE
T ss_pred cCCEEEEE--EEEEEecCCcCHHHHHHHHHHHHHHhCCCCceE
Confidence 35678887 455577899999999999999999999998875
No 47
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=44.03 E-value=21 Score=26.57 Aligned_cols=16 Identities=25% Similarity=0.609 Sum_probs=14.2
Q ss_pred ceEEecccceeeeCHH
Q 016765 165 GTVLDSGTTYAYLPGH 180 (383)
Q Consensus 165 ~~ivDSGts~~~lP~~ 180 (383)
.++||||++.+++|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEeEc
Confidence 6799999999999864
No 48
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=30.80 E-value=49 Score=31.18 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=35.2
Q ss_pred CceEEEEEEEEEEeeecCCCCCcchhHHHHHHhhhcccCcCCC
Q 016765 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEV 383 (383)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (383)
...+|+++ ++.+.....+++|+..+..+.||..|+++.+||
T Consensus 296 ~g~~~~n~--d~~~~~~~pk~~~~~~~~~~~~~~~~~~~~~~v 336 (371)
T 1w55_A 296 IGFELINI--DICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRI 336 (371)
T ss_dssp TTEEEEEE--EEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGE
T ss_pred cCCEEEEE--eEEEEeCCCCchhHHHHHHHHHHHHhCCCcceE
Confidence 36778877 566678899999999999999999999998775
No 49
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta barrel, alpha helix, beta flaps, structural protein; 2.49A {Acetivibrio cellulolyticus}
Probab=28.21 E-value=28 Score=29.80 Aligned_cols=17 Identities=6% Similarity=0.308 Sum_probs=12.2
Q ss_pred CCeeeccEEEEeEEEEEECCCCEE
Q 016765 266 STTLLGGIVVRNTLVTYDRGNDKV 289 (383)
Q Consensus 266 ~~~ILG~~Flr~~yvvFD~~~~rI 289 (383)
+..|-|. ..||+..+||
T Consensus 144 Pnai~GT-------~LfDW~gn~i 160 (227)
T 3ghp_A 144 PNGITGT-------TLFNWYGNRI 160 (227)
T ss_dssp TTCBTTE-------EEEETTSCBC
T ss_pred CCCccee-------EEEeccCcEe
Confidence 4456554 5699998887
No 50
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=26.20 E-value=33 Score=20.71 Aligned_cols=17 Identities=29% Similarity=0.257 Sum_probs=14.0
Q ss_pred HHHHHHhhhcccCcCCC
Q 016765 367 ELSEFIAHELQVDDIEV 383 (383)
Q Consensus 367 ~~~~~~~~~~~~~~~~~ 383 (383)
-.+..+|.|++||.++|
T Consensus 4 P~ar~la~e~gidl~~v 20 (40)
T 2eq7_C 4 PAAERLMQEKGVSPAEV 20 (40)
T ss_dssp HHHHHHHHHTTCCTTTS
T ss_pred cHHHHHHHHhCCChhhc
Confidence 35777999999998876
No 51
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=23.29 E-value=51 Score=26.18 Aligned_cols=26 Identities=27% Similarity=0.492 Sum_probs=21.1
Q ss_pred EeEEEECCEEeeeCCceecCCCceEEecccceeeeCH
Q 016765 143 LKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPG 179 (383)
Q Consensus 143 l~~i~v~~~~~~~~~~~~~~~~~~ivDSGts~~~lP~ 179 (383)
+..+.|+|+.+ .++||||...+.|++
T Consensus 24 ~v~i~I~G~~~-----------~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 24 RITLKVGGQPV-----------TFLVDTGAQHSVLTQ 49 (132)
T ss_dssp EEEEEETTEEE-----------EEEECTTCSSCEECS
T ss_pred EEEEEECCEEE-----------EEEEeCCCCeEEEcc
Confidence 34488899866 479999999999886
No 52
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus}
Probab=23.29 E-value=34 Score=20.77 Aligned_cols=17 Identities=29% Similarity=0.233 Sum_probs=14.0
Q ss_pred HHHHHHhhhcccCcCCC
Q 016765 367 ELSEFIAHELQVDDIEV 383 (383)
Q Consensus 367 ~~~~~~~~~~~~~~~~~ 383 (383)
-.+..+|.|++||.++|
T Consensus 5 P~ar~la~e~gidl~~v 21 (41)
T 2eq9_C 5 PAARKLARELGIPIEEV 21 (41)
T ss_dssp HHHHHHHHHTTCCGGGS
T ss_pred hHHHHHHHHcCCChhhc
Confidence 45778999999998875
No 53
>3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A
Probab=23.20 E-value=31 Score=23.20 Aligned_cols=20 Identities=25% Similarity=0.032 Sum_probs=16.4
Q ss_pred chhHHHHHHhhhcccCcCCC
Q 016765 364 NFTELSEFIAHELQVDDIEV 383 (383)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~ 383 (383)
..+-.|..+|.|++||.++|
T Consensus 9 ~aSPaaRrlA~e~gIdl~~V 28 (58)
T 3rnm_E 9 LATPAVRNLAMENNIKLSEV 28 (58)
T ss_dssp CCCHHHHHHHHHTTCCGGGC
T ss_pred CcCHHHHHHHHHcCCCHHHC
Confidence 34567899999999998876
No 54
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=22.92 E-value=58 Score=24.47 Aligned_cols=30 Identities=17% Similarity=0.386 Sum_probs=23.4
Q ss_pred eeEEEeEEEECCEEeeeCCceecCCCceEEecccceeeeCH
Q 016765 139 YNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPG 179 (383)
Q Consensus 139 w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSGts~~~lP~ 179 (383)
|.=.+-.+.|+|+.+ .+++|||.-.+.+.+
T Consensus 6 ~~rP~vtvkI~Gq~~-----------eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLK-----------EALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEE-----------EEEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEE-----------EEEeccCCCcEEEec
Confidence 444566688999876 579999999988775
No 55
>2uzh_A 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; ISPF, lyase, mycobacteria, complex with CDP; HET: CDP IPE; 2.2A {Mycobacterium smegmatis}
Probab=22.77 E-value=1.2e+02 Score=24.89 Aligned_cols=37 Identities=16% Similarity=0.237 Sum_probs=31.2
Q ss_pred CceEEEEEEEEEEeeecCCCCCcchhHHHHHHhhhcccC
Q 016765 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVD 379 (383)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (383)
...+|+++ ++.+.....++.|+..+..+.||.-|+++
T Consensus 92 ~G~~i~Nv--D~tii~q~PKi~p~~~~m~~~ia~~L~~~ 128 (165)
T 2uzh_A 92 AGFVIGNA--TVQVIGNRPKVGPRREEAQQVLSELVGAP 128 (165)
T ss_dssp TTEEEEEE--EEEEESSSSCCGGGHHHHHHHHHHHHTSC
T ss_pred cCCEEEEE--EEEEEcCCCcchHHHHHHHHHHHHHhCCC
Confidence 36788887 45557789999999999999999999875
No 56
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=22.69 E-value=62 Score=24.50 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=26.2
Q ss_pred eeEEEeEEEECCEEeeeCCceecCCCceEEecccceeeeCHHHHH
Q 016765 139 YNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFA 183 (383)
Q Consensus 139 w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSGts~~~lP~~~~~ 183 (383)
|.=.+-.+.|+|+.+ .+++|||.-.+.+.+....
T Consensus 6 ~~RP~v~v~I~Gq~~-----------e~LLDTGAD~TVl~~~~w~ 39 (104)
T 1fmb_A 6 EKRPTTIVLINDTPL-----------NVLLDTGADTSVLTTAHYN 39 (104)
T ss_dssp SSCCEEEEEETTEEE-----------EEEECTTCSSCEEEHHHHH
T ss_pred cCCCEEEEEECCEEE-----------EEEeccCCCcEEEccccCc
Confidence 444556688999865 5799999999999876653
No 57
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus}
Probab=22.36 E-value=36 Score=20.55 Aligned_cols=17 Identities=29% Similarity=0.216 Sum_probs=13.8
Q ss_pred HHHHHHhhhcccCcCCC
Q 016765 367 ELSEFIAHELQVDDIEV 383 (383)
Q Consensus 367 ~~~~~~~~~~~~~~~~~ 383 (383)
-.+..+|.|++||.++|
T Consensus 4 P~ar~la~e~gidl~~v 20 (40)
T 2eq8_C 4 PSIRRLARELGVDLTRL 20 (40)
T ss_dssp HHHHHHHHHHTCCGGGC
T ss_pred hHHHHHHHHhCCChhhc
Confidence 35777999999998875
No 58
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=22.30 E-value=69 Score=29.12 Aligned_cols=31 Identities=16% Similarity=0.315 Sum_probs=22.7
Q ss_pred CCceeEEEeEEEECCEEeeeCCceecCCCceEEecccceeeeCHH
Q 016765 136 SPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGH 180 (383)
Q Consensus 136 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSGts~~~lP~~ 180 (383)
...|.++ |.||.+.+ .++||||++.+++|..
T Consensus 14 ~~~Y~~~---i~iG~Q~~-----------~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 14 DEEYITP---VTIGGTTL-----------NLNFDTGSADLWVFST 44 (323)
T ss_dssp GSCEEEE---EEETTEEE-----------EEEEETTCCCEEECBT
T ss_pred CCEEEEE---EEECCEEE-----------EEEEeCCCcceEEecC
Confidence 4456554 77884433 5799999999999975
No 59
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=21.93 E-value=54 Score=26.18 Aligned_cols=21 Identities=24% Similarity=0.460 Sum_probs=17.3
Q ss_pred EEeEEEEEECCCCEEEEecCC
Q 016765 275 VRNTLVTYDRGNDKVGFWKTN 295 (383)
Q Consensus 275 lr~~yvvFD~~~~rIGfa~~~ 295 (383)
|...++-+|+..+|||+|-++
T Consensus 1 ~~~~iLglD~G~kriGvAvsd 21 (138)
T 1nu0_A 1 MSGTLMAFDFGTKSIGVAVGQ 21 (138)
T ss_dssp CCCEEEEEECCSSEEEEEEEE
T ss_pred CCCeEEEEEeCCCEEEEEEEc
Confidence 345688999999999999764
No 60
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=21.85 E-value=58 Score=24.51 Aligned_cols=30 Identities=17% Similarity=0.420 Sum_probs=23.4
Q ss_pred ceeEEEeEEEECCEEeeeCCceecCCCceEEecccceeeeC
Q 016765 138 YYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLP 178 (383)
Q Consensus 138 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSGts~~~lP 178 (383)
.|.=.+..+.|+|+.+ .+++|||.-.+.+.
T Consensus 5 l~~RP~vti~I~Gq~~-----------e~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPV-----------EVLLDTGADDSIVA 34 (99)
T ss_dssp SSSCCEEEEEETTEEE-----------EEEECTTCSSCEES
T ss_pred cccCCeEEEEECCEEE-----------EEEEecCCCceEEc
Confidence 3555667789999977 47999999888873
No 61
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=21.24 E-value=74 Score=28.90 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=23.0
Q ss_pred CCceeEEEeEEEECCEEeeeCCceecCCCceEEecccceeeeCHHH
Q 016765 136 SPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHA 181 (383)
Q Consensus 136 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ivDSGts~~~lP~~~ 181 (383)
...|.++ |.||.+.+ .++||||++.+++|..-
T Consensus 14 ~~~Y~~~---i~iG~q~~-----------~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 14 DEEYITQ---VTVGDDTL-----------GLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp GCCEEEE---EEETTEEE-----------EEEEETTCCCEEECBTT
T ss_pred CCEEEEE---EEECCEEE-----------EEEEcCCCcceEEecCC
Confidence 4456544 77884433 67999999999999753
No 62
>1ywx_A 30S ribosomal protein S24E; GFT MRR16, nesgc, structural genomics, PSI, protein structure initiative; NMR {Methanococcus maripaludis} SCOP: d.12.1.3
Probab=20.43 E-value=84 Score=23.74 Aligned_cols=31 Identities=10% Similarity=0.237 Sum_probs=25.2
Q ss_pred EeeecCCCCCcchhHHHHHHhhhcccCcCCC
Q 016765 353 SFSLNNSHMKPNFTELSEFIAHELQVDDIEV 383 (383)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (383)
.+-+.|..-+|.-+|+.+-||..|+++.++|
T Consensus 20 ~~~v~H~~~tpsk~eirekLAk~~~~~~d~V 50 (102)
T 1ywx_A 20 KFTVSFDAATPSIKDVKMKLVAVLNANKQVL 50 (102)
T ss_dssp EEEEECSSCCCCHHHHHHHHHHHHTSCSTTE
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHCCCCCEE
Confidence 3445566678999999999999999998764
Done!