Your job contains 1 sequence.
>016769
MSKRPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS
AAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK
EPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQL
SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG
SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIK
KEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSD
CKLMASASEDSTVALWELYPPHA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016769
(383 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123869 - symbol:EMB2757 "AT4G29860" species:3... 1333 4.1e-136 1
DICTYBASE|DDB_G0289181 - symbol:gnb1l "guanine nucleotide... 371 2.9e-48 2
ZFIN|ZDB-GENE-050320-77 - symbol:gnb1l "guanine nucleotid... 284 2.8e-40 2
UNIPROTKB|F1NF00 - symbol:GNB1L "Uncharacterized protein"... 326 2.1e-29 1
UNIPROTKB|Q9BYB4 - symbol:GNB1L "Guanine nucleotide-bindi... 324 3.4e-29 1
UNIPROTKB|F1RK57 - symbol:GNB1L "Uncharacterized protein"... 315 3.1e-28 1
MGI|MGI:1338057 - symbol:Gnb1l "guanine nucleotide bindin... 312 6.4e-28 1
UNIPROTKB|F1MBU4 - symbol:GNB1L "Uncharacterized protein"... 312 6.4e-28 1
RGD|1594165 - symbol:Gnb1l "guanine nucleotide binding pr... 304 4.5e-27 1
UNIPROTKB|A4RJA0 - symbol:asa1 "ASTRA-associated protein ... 145 1.2e-17 4
POMBASE|SPAC1006.02 - symbol:asa1 "Astra associated prote... 185 2.2e-16 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 203 7.9e-13 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 136 2.2e-11 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 142 3.7e-11 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 141 4.2e-11 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 141 4.9e-11 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 141 4.9e-11 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 141 4.9e-11 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 141 4.9e-11 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 141 4.9e-11 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 147 5.9e-11 2
FB|FBgn0039067 - symbol:wda "will decrease acetylation" s... 151 1.1e-10 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 153 3.5e-10 3
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 144 6.7e-10 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 116 8.5e-10 2
TAIR|locus:2157762 - symbol:AT5G50230 "AT5G50230" species... 135 8.8e-10 2
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 127 1.7e-09 2
DICTYBASE|DDB_G0292592 - symbol:lst8 "WD40 repeat-contain... 125 1.9e-09 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 130 2.2e-09 2
ASPGD|ASPL0000005389 - symbol:sconB species:162425 "Emeri... 164 2.2e-09 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 145 2.6e-09 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 145 2.6e-09 2
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 130 3.0e-09 2
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 117 3.1e-09 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 129 3.3e-09 2
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 146 3.6e-09 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 117 3.8e-09 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 130 4.4e-09 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 130 4.5e-09 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 129 4.6e-09 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 109 5.5e-09 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 128 5.9e-09 2
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 108 7.1e-09 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 108 7.1e-09 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 108 7.1e-09 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 108 7.1e-09 2
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 121 1.0e-08 2
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 148 1.1e-08 2
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 161 1.1e-08 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 131 1.2e-08 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 125 1.3e-08 2
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 123 1.6e-08 2
SGD|S000004212 - symbol:UTP13 "Nucleolar protein" species... 114 1.9e-08 2
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 134 2.5e-08 2
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 136 2.6e-08 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 135 2.8e-08 2
UNIPROTKB|I3LI24 - symbol:GNB2L1 "Guanine nucleotide-bind... 132 3.2e-08 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 117 5.9e-08 2
UNIPROTKB|P63247 - symbol:GNB2L1 "Guanine nucleotide-bind... 134 6.0e-08 2
UNIPROTKB|P63243 - symbol:GNB2L1 "Guanine nucleotide-bind... 134 6.0e-08 2
UNIPROTKB|F1PLR0 - symbol:GNB2L1 "Uncharacterized protein... 134 6.0e-08 2
UNIPROTKB|P63244 - symbol:GNB2L1 "Guanine nucleotide-bind... 134 6.0e-08 2
UNIPROTKB|P63246 - symbol:GNB2L1 "Guanine nucleotide-bind... 134 6.0e-08 2
UNIPROTKB|B1N1C2 - symbol:GNB2L1 "Uncharacterized protein... 134 6.0e-08 2
UNIPROTKB|Q4R7Y4 - symbol:GNB2L1 "Guanine nucleotide-bind... 134 6.0e-08 2
UNIPROTKB|Q5U275 - symbol:gnb2l1 "LOC495666 protein" spec... 134 6.0e-08 2
MGI|MGI:101849 - symbol:Gnb2l1 "guanine nucleotide bindin... 134 6.0e-08 2
RGD|69229 - symbol:Gnb2l1 "guanine nucleotide binding pro... 134 6.0e-08 2
UNIPROTKB|G8JL27 - symbol:GNB2L1 "Guanine nucleotide-bind... 134 6.3e-08 2
DICTYBASE|DDB_G0279507 - symbol:plrg1 "putative RNA splic... 125 6.9e-08 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 112 7.0e-08 2
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 146 7.6e-08 2
ZFIN|ZDB-GENE-990415-89 - symbol:gnb2l1 "guanine nucleoti... 134 7.7e-08 2
RGD|1307480 - symbol:Wdr3 "WD repeat domain 3" species:10... 120 7.9e-08 2
UNIPROTKB|A5PJS1 - symbol:GNB5 "GNB5 protein" species:991... 140 8.0e-08 2
ZFIN|ZDB-GENE-070112-342 - symbol:gnb5a "guanine nucleoti... 142 9.8e-08 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 119 1.0e-07 2
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 108 1.0e-07 2
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 155 1.1e-07 1
FB|FBgn0001105 - symbol:Gbeta13F "G protein beta-subunit ... 131 1.1e-07 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 156 1.2e-07 2
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 98 1.2e-07 2
GENEDB_PFALCIPARUM|PF08_0019 - symbol:PF08_0019 "receptor... 137 1.2e-07 2
UNIPROTKB|Q8IBA0 - symbol:PfRACK "Receptor for activated ... 137 1.2e-07 2
MGI|MGI:2443143 - symbol:Wdr3 "WD repeat domain 3" specie... 121 1.2e-07 2
UNIPROTKB|Q6PNB6 - symbol:GNB5 "Guanine nucleotide-bindin... 140 1.3e-07 2
UNIPROTKB|F1NDZ6 - symbol:FBXW8 "Uncharacterized protein"... 116 1.3e-07 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 107 1.5e-07 2
UNIPROTKB|F1SAY9 - symbol:WDR3 "Uncharacterized protein" ... 124 1.5e-07 2
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 151 1.6e-07 1
ZFIN|ZDB-GENE-050417-160 - symbol:wdr38 "WD repeat domain... 140 1.6e-07 1
UNIPROTKB|O42249 - symbol:gnb2l1 "Guanine nucleotide-bind... 146 1.6e-07 1
RGD|620759 - symbol:Gnb5 "guanine nucleotide binding prot... 139 1.7e-07 2
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 106 1.7e-07 3
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 120 1.9e-07 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 145 1.9e-07 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 151 1.9e-07 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 126 2.0e-07 2
UNIPROTKB|O14775 - symbol:GNB5 "Guanine nucleotide-bindin... 140 2.0e-07 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 114 2.2e-07 2
WARNING: Descriptions of 420 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2123869 [details] [associations]
symbol:EMB2757 "AT4G29860" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0009790 "embryo
development" evidence=IMP] [GO:0048700 "acquisition of desiccation
tolerance in seed" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009790 GO:GO:0080008 GO:GO:0048700 HOGENOM:HOG000007056
OMA:HEEPVMD EMBL:AB191306 IPI:IPI00537829 RefSeq:NP_194715.2
UniGene:At.31884 ProteinModelPortal:Q3MV14 SMR:Q3MV14 STRING:Q3MV14
PRIDE:Q3MV14 EnsemblPlants:AT4G29860.1 GeneID:829108
KEGG:ath:AT4G29860 TAIR:At4g29860 InParanoid:Q3MV14
PhylomeDB:Q3MV14 ProtClustDB:CLSN2680996 Genevestigator:Q3MV14
Uniprot:Q3MV14
Length = 386
Score = 1333 (474.3 bits), Expect = 4.1e-136, P = 4.1e-136
Identities = 250/384 (65%), Positives = 308/384 (80%)
Query: 1 MSKRPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS 60
MSKRPPP DPVAVLRGHR SV DV FH +K +LF G+ GELRIWDT+QHR VSS+W HS
Sbjct: 1 MSKRPPP-DPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHS 59
Query: 61 AAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK 120
A+G+++VA P +G +K+ISQGRDGTVKCWDIE+GGLS +P L ++T +YHFCK SLVK
Sbjct: 60 RANGVLAVAASPWLGEDKIISQGRDGTVKCWDIEDGGLSRDPLLILETCAYHFCKFSLVK 119
Query: 121 EPYANAKQA-NEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP-AEGPKYMAVAGE 178
+P + ++A + + C E++ G+T + DS+ S ++ D AEG ++AV GE
Sbjct: 120 KPKNSLQEAESHSRGCDEQDGGDTCNVQIADDSERSEEDSGLLQDKDHAEGTTFVAVVGE 179
Query: 179 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 238
Q +EVEIWDLNT ++ +L Q+S SPN S+KGRGMCMAVQ + P +SQGF++VLAGYE
Sbjct: 180 QPTEVEIWDLNTGDKIIQLPQSSPDESPNASTKGRGMCMAVQLFCPPESQGFLHVLAGYE 239
Query: 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV 298
DGSIL+WDIRN IPLT++K H EPVL LS+ SC+GGISGGAD KIV+YNL+HSTGSC
Sbjct: 240 DGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGGISGGADDKIVMYNLNHSTGSCT 299
Query: 299 IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFS 358
I+KEI LERPG+SGTSIR D KIAATAGWD R+R+YNYRKG+ALAILKYH ATCNAVS+S
Sbjct: 300 IRKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYS 359
Query: 359 SDCKLMASASEDSTVALWELYPPH 382
DC+LMASASED+TVALW+LYPPH
Sbjct: 360 PDCELMASASEDATVALWKLYPPH 383
>DICTYBASE|DDB_G0289181 [details] [associations]
symbol:gnb1l "guanine nucleotide-binding protein
subunit beta-like protein 1" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289181
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000131 RefSeq:XP_636324.1
ProteinModelPortal:Q54HW5 EnsemblProtists:DDB0267049 GeneID:8626997
KEGG:ddi:DDB_G0289181 OMA:RTHKESA ProtClustDB:CLSZ2846642
Uniprot:Q54HW5
Length = 359
Score = 371 (135.7 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
Identities = 77/206 (37%), Positives = 122/206 (59%)
Query: 181 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK-------SQGFVNV 233
S+VEIWDL + +L N+ K G+ M+++ Y ++ S + +
Sbjct: 156 SQVEIWDLKNKQVINKLKPNN----QQLFEK-LGLPMSLKLYYENENNDNSNQSNDQIRL 210
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
GYE+G +L+WD+RN IPL + K+H EP+L ++ + GISG D I+ +N+++
Sbjct: 211 CTGYENGELLIWDLRNTSIPLVSSKLHNEPILSFALSNNSTKGISGSGDTNIIEFNINYE 270
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN 353
+ I K L GIS IR D KI ATAGWD+R+RI+N++K + LAILKYH +
Sbjct: 271 SKQFNITKTHKLNNGGISEIKIRNDEKIYATAGWDKRIRIFNFKKQTPLAILKYHTESVY 330
Query: 354 AVSFSSDCKLMASASEDSTVALWELY 379
++ F+S+ ++AS S+D +ALW++Y
Sbjct: 331 SIDFNSN-NILASGSKDCKIALWDIY 355
Score = 150 (57.9 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 8 PDPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAA--HG 64
PDP +LRGH+ +V V F + P +L++G+ GEL++W+ + + +S+ HS G
Sbjct: 13 PDPYYILRGHKFNVNSVLFDKVNPNLLYSGSGDGELKLWNIEEKKCISTQIAHSEGIGGG 72
Query: 65 IVSVATGPSIGLNK-----------VISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHF 113
++S+ + N+ ++SQGRDG +K W I + N + ++TNS
Sbjct: 73 VLSLQWLSNDNNNENNNNNDEICGNILSQGRDGVIKIWSIIDNCTFKN-TYRLETNSLSL 131
Query: 114 CKLS 117
K S
Sbjct: 132 GKCS 135
>ZFIN|ZDB-GENE-050320-77 [details] [associations]
symbol:gnb1l "guanine nucleotide binding protein (G
protein), beta polypeptide 1-like" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050320-77
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:54584 HOVERGEN:HBG051745 EMBL:BC090490
IPI:IPI00555398 RefSeq:NP_001013526.1 UniGene:Dr.81918
ProteinModelPortal:Q5BLC9 STRING:Q5BLC9 DNASU:541381 GeneID:541381
KEGG:dre:541381 InParanoid:Q5BLC9 NextBio:20879193 Uniprot:Q5BLC9
Length = 323
Score = 284 (105.0 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 60/170 (35%), Positives = 101/170 (59%)
Query: 214 GMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESC 273
GM M+++ + G V + AGYEDGS+++WD+ + P + +KVH EPV+ L +D
Sbjct: 156 GMLMSMKMW--QADSGPV-LCAGYEDGSVVLWDVSHRR-PFSLLKVHPEPVMSLDVDVCR 211
Query: 274 NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 333
GISG ++ + + LD+ S + I + PG+S IR D KI A+AGWD +R+
Sbjct: 212 QKGISGSSENILQSWRLDNQQ-SLQMHDSIQMTNPGVSQLRIRADGKILASAGWDNNIRV 270
Query: 334 YNYRKGSALAILKYHHATCNAVSFSSDC----KLMASASEDSTVALWELY 379
+ ++K LA+L++H N+V+FS +L+A+ S+D +++W +Y
Sbjct: 271 FGWKKLKPLAVLQHHTDMVNSVAFSDHQDPTQRLLAAGSKDQRISVWSIY 320
Score = 161 (61.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 55/190 (28%), Positives = 89/190 (46%)
Query: 6 PPPDPVAVLRGHRASVTDV---CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA 62
PPPDP+ +LRG ASV + C P+L++G+ G + +W+ R H A
Sbjct: 4 PPPDPLYILRGSGASVNALHFCCDGDGPPLLYSGSGKGAVHVWNLSTRRAERVLESH-AG 62
Query: 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEP 122
+ ++ + T + + +ISQGRD V WD+ G + SL T S FC+ SL+
Sbjct: 63 NSVIWLNTFNN-SRSCLISQGRDMRVCVWDLSEGRSAVTDSL--HTGSVGFCQCSLLGSR 119
Query: 123 YANAKQANEPKDCYEREVGETVDTDSLCDSK-ESNRSFEIIDDV-PAE-GPKYMAVAGEQ 179
+ A+ + E V E +C K +SN + + A+ GP + AG +
Sbjct: 120 LGSTLLAHPTQHMEEVSVVEMSSWTQVCSLKPDSNLGMLMSMKMWQADSGP--VLCAGYE 177
Query: 180 LSEVEIWDLN 189
V +WD++
Sbjct: 178 DGSVVLWDVS 187
>UNIPROTKB|F1NF00 [details] [associations]
symbol:GNB1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0035176 "social
behavior" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 OMA:HEEPVMD
GeneTree:ENSGT00390000018606 EMBL:AADN02034786 IPI:IPI00587443
Ensembl:ENSGALT00000002979 Uniprot:F1NF00
Length = 328
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 97/327 (29%), Positives = 165/327 (50%)
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
+A H + G + + S +G + W+++ + + +L C L +
Sbjct: 17 AAVHALHFSCGGGEPDIPVLFSGSENGFIHVWNLKTHRVDA--ALDGHGRK-SVCGLKTM 73
Query: 120 KEPYANAKQANEPKDC-YEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGE 178
Q + + C ++ G T TDS+ ++ AEG MA A +
Sbjct: 74 DGKERLLSQGRDQRICLWDLAEGRTSVTDSVFTENVGFCRCSLLK--VAEGRWLMATAAK 131
Query: 179 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPS-KSQGFVNVLAGY 237
L EV++ +L + + C P +K GM M ++ + S SQ ++LAGY
Sbjct: 132 ALEEVQVLELPSKT-------SVCTLKPEVGAK-LGMPMCLKLWQGSCGSQP--SLLAGY 181
Query: 238 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC 297
EDGS+L+W++ + G L+ + H EPV+ L D GISG +++ + +++L+ +
Sbjct: 182 EDGSVLLWNL-STGKVLSQLICHQEPVMSLDFDSEKAKGISGSSEKVLSIWSLNEQQ-NL 239
Query: 298 VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSF 357
++K L GIS +IRPD KI ATAGWD R+RI+ ++K LA+L YH AT ++VSF
Sbjct: 240 QVQKTHRLVNAGISDITIRPDKKILATAGWDHRIRIFGWKKLKPLAVLDYHTATVHSVSF 299
Query: 358 S-----SDCKLMASASEDSTVALWELY 379
S SD +L+A+ ++D +++W +Y
Sbjct: 300 SDHKSPSD-RLLAAGAKDHRISIWSIY 325
Score = 168 (64.2 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 63/223 (28%), Positives = 100/223 (44%)
Query: 6 PPPDPVAVLRGHRASVTDVCF-----HQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS 60
PPPDP VLRG A+V + F P+LF+G+ G + +W+ HR ++
Sbjct: 4 PPPDPHFVLRGTGAAVHALHFSCGGGEPDIPVLFSGSENGFIHVWNLKTHRVDAAL---- 59
Query: 61 AAHGIVSVATGPSI-GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
HG SV ++ G +++SQGRD + WD+ G S S + T + FC+ SL+
Sbjct: 60 DGHGRKSVCGLKTMDGKERLLSQGRDQRICLWDLAEGRTSVTDS--VFTENVGFCRCSLL 117
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDSLCDSK-ESNRSFEIIDDVP----AEGPKYMA 174
K A K E +V E S+C K E + + + G +
Sbjct: 118 KVAEGRWLMATAAKALEEVQVLELPSKTSVCTLKPEVGAKLGMPMCLKLWQGSCGSQPSL 177
Query: 175 VAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 215
+AG + V +W+L+T + ++L HQ S K +G+
Sbjct: 178 LAGYEDGSVLLWNLSTGKVLSQLICHQEPVMSLDFDSEKAKGI 220
>UNIPROTKB|Q9BYB4 [details] [associations]
symbol:GNB1L "Guanine nucleotide-binding protein subunit
beta-like protein 1" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035176 "social behavior"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=NAS] [GO:0035556 "intracellular signal transduction"
evidence=NAS] [GO:0009898 "internal side of plasma membrane"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
GO:GO:0007186 GO:GO:0035176 GO:GO:0009898 UniGene:Hs.105642
EMBL:AF238328 EMBL:AF301895 EMBL:AY007378 EMBL:AB049212
EMBL:AB051432 EMBL:CR456496 EMBL:BC012060 IPI:IPI00107339
IPI:IPI00218734 RefSeq:NP_443730.1 ProteinModelPortal:Q9BYB4
SMR:Q9BYB4 IntAct:Q9BYB4 STRING:Q9BYB4 PhosphoSite:Q9BYB4
DMDM:27151507 PaxDb:Q9BYB4 PeptideAtlas:Q9BYB4 PRIDE:Q9BYB4
DNASU:54584 Ensembl:ENST00000329517 Ensembl:ENST00000403325
Ensembl:ENST00000405009 GeneID:54584 KEGG:hsa:54584 UCSC:uc002zqf.1
CTD:54584 GeneCards:GC22M019770 HGNC:HGNC:4397 HPA:HPA034627
HPA:HPA034628 MIM:610778 neXtProt:NX_Q9BYB4 PharmGKB:PA28777
HOGENOM:HOG000007056 HOVERGEN:HBG051745 InParanoid:Q9BYB4
OMA:HEEPVMD OrthoDB:EOG4GF3FM GenomeRNAi:54584 NextBio:57105
ArrayExpress:Q9BYB4 Bgee:Q9BYB4 CleanEx:HS_GNB1L
Genevestigator:Q9BYB4 GermOnline:ENSG00000185838 Uniprot:Q9BYB4
Length = 327
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 87/259 (33%), Positives = 140/259 (54%)
Query: 128 QANEPKDC-YEREVGETVDTDSLC-DSKESNRSFEIIDDVPAEG-PKY-MAVAGEQLSEV 183
Q + K C ++ G + DS+C +S RS + A G P++ +AV G EV
Sbjct: 86 QGRDLKLCLWDLAEGRSAVVDSVCLESVGFCRS-----SILAGGQPRWTLAVPGRGSDEV 140
Query: 184 EIWDLNTAERCTRLHQNSCGGSPNFSSK-GRGMCMAV-QAYLPSKSQGFVNVLAGYEDGS 241
+I ++ + + C P +K G MC+ + QA S+ +LAGYEDGS
Sbjct: 141 QILEMPSKT-------SVCALKPKADAKLGMPMCLRLWQADCSSRPL----LLAGYEDGS 189
Query: 242 ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK 301
+++WD+ + + + H EPV+ L D GISG A + + +++LD + ++
Sbjct: 190 VVLWDVSEQKV-CSRIACHEEPVMDLDFDSQKARGISGSAGKALAVWSLDWQQ-ALQVRG 247
Query: 302 EINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDC 361
L PGI+ +IRPD KI ATAGWD R+R++++R LA+L +H A V+F++D
Sbjct: 248 THELTNPGIAEVTIRPDRKILATAGWDHRIRVFHWRTMQPLAVLAFHSAAVQCVAFTAD- 306
Query: 362 KLMASASEDSTVALWELYP 380
L+A+ S+D ++LW LYP
Sbjct: 307 GLLAAGSKDQRISLWSLYP 325
Score = 152 (58.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 58/223 (26%), Positives = 103/223 (46%)
Query: 5 PPPPDPVAVLRGHRASVTDVCF-----HQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
PPPPDP VLRG ++ V + F Q +P+LF+G+ G + IW R V++ H
Sbjct: 7 PPPPDPQFVLRGTQSPVHALHFCEGAQAQGRPLLFSGSQSGLVHIWSLQTRRAVTTLDGH 66
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
+ + T P G +++SQGRD + WD+ G + S+ ++ S FC+ S++
Sbjct: 67 GG-QCVTWLQTLPQ-G-RQLLSQGRDLKLCLWDLAEGRSAVVDSVCLE--SVGFCRSSIL 121
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---ESNRSFEIIDDV-PAE-GPKYMA 174
A + E ++ E S+C K ++ + + A+ + +
Sbjct: 122 AGGQPRWTLAVPGRGSDEVQILEMPSKTSVCALKPKADAKLGMPMCLRLWQADCSSRPLL 181
Query: 175 VAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 215
+AG + V +WD++ + C+R+ H+ S K RG+
Sbjct: 182 LAGYEDGSVVLWDVSEQKVCSRIACHEEPVMDLDFDSQKARGI 224
>UNIPROTKB|F1RK57 [details] [associations]
symbol:GNB1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035176 "social behavior" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035176 CTD:54584
GeneTree:ENSGT00390000018606 EMBL:CT737290 RefSeq:NP_001230384.1
UniGene:Ssc.11798 UniGene:Ssc.79225 ProteinModelPortal:F1RK57
Ensembl:ENSSSCT00000011091 GeneID:100153889 KEGG:ssc:100153889
OMA:WDGRIRI Uniprot:F1RK57
Length = 293
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 74/220 (33%), Positives = 122/220 (55%)
Query: 168 EGPKYMAVAGEQLSEVEIWDL----NTAERCTRLHQ-NSCGGSPNFSSKGRGMCMAVQAY 222
+GP+ ++ G L ++ +WDL NT L C GS + R M +AV
Sbjct: 78 QGPQLLS-QGRDL-KLCLWDLAEGRNTVVDSVHLESVGFCRGSILAGGQPRWM-LAVPGS 134
Query: 223 LPSKSQGFVN--VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG 280
++ +LAGYEDGS+ +WD+ + + + H EPV+ L +D G+SG
Sbjct: 135 GSDEANSSPRPLLLAGYEDGSVALWDVSEQKV-CSRIACHTEPVMGLDVDSQKARGVSGS 193
Query: 281 ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS 340
A++ + ++++D + +++ L PGI+ IRPD KI ATAGWD RVR++ ++
Sbjct: 194 AEKALAVWSVDEQQ-ALQVRRTHQLTNPGIADIKIRPDRKILATAGWDHRVRVFLWQTMK 252
Query: 341 ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380
LA+L +H AT + V+F++D L+A+ S D +++W LYP
Sbjct: 253 PLAVLAFHSATVHCVAFAAD-SLLAAGSGDHRISIWSLYP 291
Score = 113 (44.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 39/125 (31%), Positives = 64/125 (51%)
Query: 1 MSKRP-PPPDPVAVLRGHRASVTDVCF-----HQTKPILFAGTTGGELRIWDTVQHRTVS 54
M+ P PPPDP VLRG +++V + F Q P+L +G+ G + IW R V+
Sbjct: 1 MADLPLPPPDPQFVLRGTQSAVHALHFCGGAQGQGCPLLLSGSLRGLVHIWSLQTRRVVA 60
Query: 55 SSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFC 114
+ H + + T P G +++SQGRD + WD+ G + S+ ++ S FC
Sbjct: 61 TLDGHGG-QCVTWLQTLPQ-G-PQLLSQGRDLKLCLWDLAEGRNTVVDSVHLE--SVGFC 115
Query: 115 KLSLV 119
+ S++
Sbjct: 116 RGSIL 120
Score = 61 (26.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 215
D P+ + +AG + V +WD++ + C+R+ H G S K RG+
Sbjct: 137 DEANSSPRPLLLAGYEDGSVALWDVSEQKVCSRIACHTEPVMGLDVDSQKARGV 190
>MGI|MGI:1338057 [details] [associations]
symbol:Gnb1l "guanine nucleotide binding protein (G
protein), beta polypeptide 1-like" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0035176 "social behavior"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1338057 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035176 CTD:54584
HOGENOM:HOG000007056 HOVERGEN:HBG051745 OMA:HEEPVMD
OrthoDB:EOG4GF3FM EMBL:AF301595 EMBL:AK010489 EMBL:AK016952
EMBL:BC024635 EMBL:BC037676 IPI:IPI00221803 IPI:IPI00308210
RefSeq:NP_001075151.1 RefSeq:NP_075609.2 UniGene:Mm.236139
ProteinModelPortal:Q9EQ15 SMR:Q9EQ15 STRING:Q9EQ15
PhosphoSite:Q9EQ15 PRIDE:Q9EQ15 Ensembl:ENSMUST00000090086
Ensembl:ENSMUST00000115600 Ensembl:ENSMUST00000167778 GeneID:13972
KEGG:mmu:13972 GeneTree:ENSGT00390000018606 NextBio:284846
Bgee:Q9EQ15 Genevestigator:Q9EQ15 GermOnline:ENSMUSG00000000884
Uniprot:Q9EQ15
Length = 326
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 74/208 (35%), Positives = 118/208 (56%)
Query: 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVN 232
+AV G+ EV+I ++ + + C P ++ GM M + + + S +
Sbjct: 129 LAVPGKGSDEVQILEMPSKT-------SVCTLKPEADARP-GMPMCLGLWQTNSSLRPL- 179
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+LAGYEDGS+ +WDI + + + H EPV+ L D GISG A + + +++LD
Sbjct: 180 LLAGYEDGSVTLWDISERKV-CSQITCHEEPVMGLDFDSQKAKGISGSAGKVLAVWSLDD 238
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
S +KK L PGI+ +IRPD KI ATAGWD R+R++++R LA+L +H A
Sbjct: 239 QQ-SLQVKKTHELTNPGIAEVTIRPDHKILATAGWDHRIRVFHWRTMKPLAVLAFHSAPV 297
Query: 353 NAVSFSSDCKLMASASEDSTVALWELYP 380
V+F++D L+A+ S+D +++W LYP
Sbjct: 298 YCVAFAAD-GLLAAGSKDQRISIWSLYP 324
Score = 162 (62.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/223 (26%), Positives = 105/223 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCF---HQT--KPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
PPPP P VLRG +++V + F Q P+LF+G+ G + IW R V++ H
Sbjct: 6 PPPPGPRFVLRGTQSAVNTLHFCPPSQAAGNPLLFSGSQNGLVHIWSLQTRRIVTTLNGH 65
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
G++ + T P G ++++SQGRD + WD+E G + S ++ +S FC+ S++
Sbjct: 66 GG-QGVIWLKTLPQ-G-HQLLSQGRDLRLCLWDLEEGRNTIMDS--VQLDSVGFCRGSIL 120
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---ESNRSFEIIDDV--PAEGPKYMA 174
A K E ++ E S+C K ++ + + + +
Sbjct: 121 VRGQQCWMLAVPGKGSDEVQILEMPSKTSVCTLKPEADARPGMPMCLGLWQTNSSLRPLL 180
Query: 175 VAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 215
+AG + V +WD++ + C+++ H+ G S K +G+
Sbjct: 181 LAGYEDGSVTLWDISERKVCSQITCHEEPVMGLDFDSQKAKGI 223
>UNIPROTKB|F1MBU4 [details] [associations]
symbol:GNB1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035176 "social behavior" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035176 OMA:HEEPVMD
GeneTree:ENSGT00390000018606 EMBL:DAAA02045774 EMBL:DAAA02045775
EMBL:DAAA02045776 IPI:IPI00710706 ProteinModelPortal:F1MBU4
Ensembl:ENSBTAT00000029367 Uniprot:F1MBU4
Length = 321
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 79/221 (35%), Positives = 127/221 (57%)
Query: 165 VPAEGPK--YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAY 222
V AEGP+ +AV G EV++ +L + T + SC P ++ GM M +Q +
Sbjct: 114 VLAEGPQRWMLAVPGRGSDEVQVLELPSK---TSV---SCL-KPEAGAR-LGMPMCLQLW 165
Query: 223 LPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD 282
S + +LAGYEDGS+ +WD+ + + + H EPV+ L++D G+SG A+
Sbjct: 166 QAESSPRPL-LLAGYEDGSLALWDVSARKV-CSRVACHSEPVMALALDPRRARGVSGSAE 223
Query: 283 QKIVLYNLDHSTGSCVIKKE--INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS 340
+ + +++L+ G +++ + PGI IRPDSKI ATAGWD RVR++ +R
Sbjct: 224 KVLAVWSLE---GQQALQERGGHSAVSPGIPSLKIRPDSKILATAGWDHRVRVFQWRTMK 280
Query: 341 ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381
LA+L +H AT + V+F++ L+A+ S D +++W LYPP
Sbjct: 281 PLAVLAFHSATVHCVAFNTT-GLLAAGSGDQRISVWSLYPP 320
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 53/209 (25%), Positives = 98/209 (46%)
Query: 6 PPPDPVAVLRGHRASVTDVCF-H--QTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA 62
P P+P VLRG R++V + F H Q P+L +G+ G + +W R +++ H
Sbjct: 4 PVPNPQFVLRGARSAVHALHFCHGAQGHPLLLSGSLRGLVHVWSLQTRRPLAALDGHGG- 62
Query: 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEP 122
+ + T P G +++SQGRD + WD+ G + ++ ++ S FC+ S++ E
Sbjct: 63 QCVTWLHTLPQ-G-PQLLSQGRDLQLCVWDLAEGRNAVVDAVHLE--SVGFCRASVLAEG 118
Query: 123 YANAKQANEPKDCYEREVGETVDTDSL-CDSKESNRSFEI---IDDVPAEG-PKYMAVAG 177
A + E +V E S+ C E+ + + AE P+ + +AG
Sbjct: 119 PQRWMLAVPGRGSDEVQVLELPSKTSVSCLKPEAGARLGMPMCLQLWQAESSPRPLLLAG 178
Query: 178 EQLSEVEIWDLNTAERCTRLHQNSCGGSP 206
+ + +WD++ + C+R+ +C P
Sbjct: 179 YEDGSLALWDVSARKVCSRV---ACHSEP 204
>RGD|1594165 [details] [associations]
symbol:Gnb1l "guanine nucleotide binding protein (G protein),
beta polypeptide 1-like" species:10116 "Rattus norvegicus"
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0035176 "social behavior"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1594165 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:54584 OMA:HEEPVMD
GeneTree:ENSGT00390000018606 IPI:IPI00959938 RefSeq:XP_001057185.3
RefSeq:XP_002724806.2 ProteinModelPortal:D4A2F0
Ensembl:ENSRNOT00000002596 GeneID:680266 KEGG:rno:680266
ArrayExpress:D4A2F0 Uniprot:D4A2F0
Length = 326
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 70/208 (33%), Positives = 119/208 (57%)
Query: 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVN 232
+AV G+ EV+I ++ + + C P +K GM M + + + S +
Sbjct: 129 LAVPGKGSDEVQILEMPSKT-------SVCTLKPEADAKP-GMPMCLGLWQTNSSLRPL- 179
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+LAGYEDGS+ +WD+ + + + H EPV+ L D G+SG A + + +++LD
Sbjct: 180 LLAGYEDGSVTLWDVSERKV-CSQITCHEEPVMGLDFDSQKAKGVSGSAGKVLAVWSLDD 238
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
S +KK L PGI+ ++RPD ++ ATAGWD R+R++++R LA+L +H A
Sbjct: 239 QQ-SLQVKKTHELINPGIAEVTLRPDHRLFATAGWDHRIRVFHWRTIKPLAVLAFHSAPV 297
Query: 353 NAVSFSSDCKLMASASEDSTVALWELYP 380
+ V+F++D L+A+ S+D +++W LYP
Sbjct: 298 HCVAFAAD-GLLAAGSKDQRISVWSLYP 324
Score = 158 (60.7 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 57/223 (25%), Positives = 101/223 (45%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQT-----KPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
PPPP P VLRG +++V + F P+LF+G+ G + IW R V++ H
Sbjct: 6 PPPPSPRFVLRGTQSAVNTLHFCPAPGAAENPLLFSGSQNGLVHIWSLQTRRIVATLNGH 65
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
G+ + T P G +++SQGRD + WD+ G + S ++ +S FCK S++
Sbjct: 66 GG-QGVTWLKTLPQ-G-QQLLSQGRDPRLCLWDLAEGRNTVMDS--VQLDSVGFCKSSIL 120
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---ESNRSFEIIDDV--PAEGPKYMA 174
A K E ++ E S+C K ++ + + + +
Sbjct: 121 VRGQLCWMLAVPGKGSDEVQILEMPSKTSVCTLKPEADAKPGMPMCLGLWQTNSSLRPLL 180
Query: 175 VAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 215
+AG + V +WD++ + C+++ H+ G S K +G+
Sbjct: 181 LAGYEDGSVTLWDVSERKVCSQITCHEEPVMGLDFDSQKAKGV 223
>UNIPROTKB|A4RJA0 [details] [associations]
symbol:asa1 "ASTRA-associated protein 1" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016568 EMBL:CM001232 RefSeq:XP_003714908.1
ProteinModelPortal:A4RJA0 EnsemblFungi:MGG_01888T0 GeneID:2679563
KEGG:mgr:MGG_01888 OrthoDB:EOG46DQBT Uniprot:A4RJA0
Length = 469
Score = 145 (56.1 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 301 KEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS 359
K +N + G G IR D +I ATAGWD RVR+Y+ + LA+LK+H C AV+FS+
Sbjct: 357 KVVNTKHAGQQGLRIRSDGRIFATAGWDSRVRVYSCKTMKELAVLKWHQVGCFAVAFST 415
Score = 98 (39.6 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 26/87 (29%), Positives = 40/87 (45%)
Query: 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIV 66
P P ++LRGH+A V F + L G G + +WD R + W AH V
Sbjct: 12 PAHPRSILRGHKAQVHAAAFVRNNERLVTGDADGFVVVWDLTIMRP-RAVW---RAHDDV 67
Query: 67 SVATGPSIGLNKVISQGRDGTVKCWDI 93
+ G G +++I+ GRD + W +
Sbjct: 68 LLGIG-GWGTDRLITHGRDNKLIVWQL 93
Score = 63 (27.2 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 211 KGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV-WDIRNPGIPLTAM------KVHLEP 263
+ GM MA++ + + G+ V GYE+G LV P+ K H +P
Sbjct: 180 QSEGMVMALELF---RVDGYFTVAVGYENGVALVAQQAERSETPVGTWNVRYRSKAHTQP 236
Query: 264 VLCLSIDESCNGGISGGADQKIV 286
VL L + + ++ AD ++
Sbjct: 237 VLSLDVSLGRDFFLTSSADSLLI 259
Score = 55 (24.4 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 355 VSFSSDCKLMASASEDSTVALWELY 379
+S + +A+ S+D V+LWE+Y
Sbjct: 445 ISHAKSAHWLAAGSKDGKVSLWEIY 469
Score = 50 (22.7 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 290
++ G DG ++VWD+ P + H + +L + + I+ G D K++++ L
Sbjct: 38 LVTGDADGFVVVWDLTIMR-PRAVWRAHDDVLLGIG-GWGTDRLITHGRDNKLIVWQL 93
Score = 39 (18.8 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 344 ILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
++ HA + SD ++ A+A DS V ++
Sbjct: 358 VVNTKHAGQQGLRIRSDGRIFATAGWDSRVRVY 390
>POMBASE|SPAC1006.02 [details] [associations]
symbol:asa1 "Astra associated protein 1 Asa1"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IPI] [GO:0070209 "ASTRA complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC1006.02 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016568 OrthoDB:EOG46DQBT
RefSeq:NP_594849.1 ProteinModelPortal:Q9UTR9 STRING:Q9UTR9
EnsemblFungi:SPAC1006.02.1 GeneID:2543255 KEGG:spo:SPAC1006.02
OMA:QQNIRIR NextBio:20804276 GO:GO:0070209 InterPro:IPR027106
PANTHER:PTHR19846 Uniprot:Q9UTR9
Length = 368
Score = 185 (70.2 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 64/224 (28%), Positives = 107/224 (47%)
Query: 182 EVEIWDLNTAERCTRLHQNSCGG------SPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 235
E++++D + + H+ CG P S G M+ + + +V + A
Sbjct: 154 ELDVYDDESLYH-PQTHKEDCGKRLQTRIQPEESVGKTGSVMSTSVTVTDEK--YVLLAA 210
Query: 236 GYEDGSILVW-----DIRNPGIPLTAM-------KVHLEPVLCLSIDESCNGGISGGADQ 283
GYE G ++ + +++ + A+ K H +PVL S++ + + S GAD
Sbjct: 211 GYESGHVVQYICSLENVKTVTLDFKAVWKMVYAYKSHSQPVL--SVEYAGSKLFSTGADD 268
Query: 284 KIVLYNLDHSTGSCVIKKEINLERP--------GISGTSIRPDSKIAATAGWDRRVRIYN 335
I L H T S + +L P G IR D+KI ATAGWD R R+Y+
Sbjct: 269 CICL----HPTPSSIADDLGSLPHPIFRKTKHCGQQNIRIRSDNKILATAGWDGRGRVYS 324
Query: 336 YRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379
+ + LA+LKYH N+++F ++A AS+D+ ++LW+LY
Sbjct: 325 CQTLAPLAVLKYHSDGINSLAFHPGSNVIALASKDTRISLWKLY 368
Score = 82 (33.9 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW-VHSAAHGIV 66
P P VLRGH +SVT V F + L++G G + W R +W H+ +
Sbjct: 4 PTPFYVLRGHSSSVTSVLFDANE-YLYSGDEAGFVICWCLTSMRP-KCAWRAHTKTILGM 61
Query: 67 SVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN 101
+ G ++ + GRD + W I+ ++ N
Sbjct: 62 QIVKGGAL-----CTHGRDCRLVTWKIDFNCMTDN 91
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 203 (76.5 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 90/394 (22%), Positives = 162/394 (41%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHG 64
P + + L GH +V + F +L +G+ + +WD+ + + H H
Sbjct: 779 PATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHP--HS 836
Query: 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN-PSLTIKTNSYHFC---KL---- 116
I SVA P G ++ S D T+K WD+ G L S + S F KL
Sbjct: 837 IWSVAFAPD-G-KELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASS 894
Query: 117 ---SLVK--EPYANA-KQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGP 170
S +K P +Q+ E + + + V + D L E N + ++ + PA G
Sbjct: 895 SLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKN-TVKLWN--PATGE 951
Query: 171 KYMAVAGEQLSEVEIW------DLNTAERCTRLHQ-NSCGGSPNFSSKGRGMCMAVQAYL 223
+ G S + L ++ T + NS G + KG + + A+
Sbjct: 952 LLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFS 1011
Query: 224 PSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ 283
P ++++G +D +I +WD+ + +++ H V ++ S D
Sbjct: 1012 PDGK----HLVSGSDDNTIKLWDLATSELQ-QSLEDHSRSVHAVAFSPDDKQLASSSLDS 1066
Query: 284 KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA 343
I L+ D +TG +++ + G+ + PD K+ A+ +D ++++N G
Sbjct: 1067 TIKLW--DSATGE--LQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQ 1122
Query: 344 ILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
L ++V+FS D K +AS DST+ LW+
Sbjct: 1123 TLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWD 1156
Score = 131 (51.2 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 42/144 (29%), Positives = 67/144 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D ++ +WD G L + H V L+ SG D I L+ D
Sbjct: 765 LVSGSYDDTVKIWDPAT-GELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLW--DS 821
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+TG + E + I + PD K A+A D ++I++ G L H +
Sbjct: 822 ATGELLQTFEGHPH--SIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSV 879
Query: 353 NAVSFSSDCKLMASASEDSTVALW 376
+V+FS D KL+AS+S DST+ +W
Sbjct: 880 RSVAFSPDGKLLASSSLDSTIKVW 903
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 260 HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319
HL PV + +SG D + ++ D +TG + + ++ + + PD
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIW--DPATGELL--QTLDGHSGTVESLAFSPDG 804
Query: 320 KIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
K+ A+ +D + +++ G L + H + +V+F+ D K +ASAS+DST+ +W+L
Sbjct: 805 KLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDL 863
Score = 125 (49.1 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 278 SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 337
SG D I L+ D +TG + E + +R I PD K+ A+ +D+ ++++
Sbjct: 1145 SGYYDSTIKLW--DSATGELLQTLEGHSDR--IQSVVFSPDGKLLASGSYDQTAKLWDPA 1200
Query: 338 KGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
G L I + H +V+FS D KL+AS+S T+ LW+
Sbjct: 1201 TGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD 1240
Score = 119 (46.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 39/141 (27%), Positives = 66/141 (46%)
Query: 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNLDHSTGS 296
D +I +WD + T ++ H + V S+ S +G + S D I L+N TG
Sbjct: 1065 DSTIKLWDSATGELQRT-LEGHSQGVR--SVTFSPDGKLLASNSYDGTIKLWN--PLTGE 1119
Query: 297 CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVS 356
+++ + + + PD K A+ +D +++++ G L L+ H +V
Sbjct: 1120 --LQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVV 1177
Query: 357 FSSDCKLMASASEDSTVALWE 377
FS D KL+AS S D T LW+
Sbjct: 1178 FSPDGKLLASGSYDQTAKLWD 1198
Score = 116 (45.9 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIV-LYNLDHSTGS 296
D +I VW NP + S+ S +G ++ G+++ V L+N +TG
Sbjct: 897 DSTIKVW---NPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN--PATGE 951
Query: 297 CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVS 356
+ E + + + + PD K A++ D ++++N G K H AV+
Sbjct: 952 LLQTLEGHSQ--SVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVA 1009
Query: 357 FSSDCKLMASASEDSTVALWEL 378
FS D K + S S+D+T+ LW+L
Sbjct: 1010 FSPDGKHLVSGSDDNTIKLWDL 1031
Score = 72 (30.4 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 23/86 (26%), Positives = 35/86 (40%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L H V V F L +G+ ++IWD + + HS + S+A P
Sbjct: 746 LENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGT--VESLAFSPD 803
Query: 74 IGLNKVISQGR-DGTVKCWDIENGGL 98
K+++ G D T+ WD G L
Sbjct: 804 ---GKLLASGSYDNTIDLWDSATGEL 826
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 136 (52.9 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D ++ +WD+ G L + H +PV + + + +S D ++ D
Sbjct: 128 IVSGSFDETVRIWDVTT-GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW--DS 184
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH-HAT 351
TG CV K I+ E P +S P+ K D +R++N L H +A
Sbjct: 185 GTGHCV-KTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQ 243
Query: 352 -CNAVSFS-SDCKLMASASEDSTVALWEL 378
C + +FS ++ K + S SED+ V +WEL
Sbjct: 244 YCISSAFSVTNGKRIVSGSEDNCVHMWEL 272
Score = 87 (35.7 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 22/91 (24%), Positives = 38/91 (41%)
Query: 6 PPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGI 65
P +PV GH ++DV F + + + L++WD + + H+ +
Sbjct: 59 PIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHT--NYA 116
Query: 66 VSVATGPSIGLNKVISQGRDGTVKCWDIENG 96
V P N ++S D TV+ WD+ G
Sbjct: 117 FCVNFNPQS--NMIVSGSFDETVRIWDVTTG 145
Score = 73 (30.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 25/109 (22%), Positives = 47/109 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG---ISGGADQKIVLYN 289
+L G D ++ +W+I + L H+ C+S S G +SG D + ++
Sbjct: 213 ILVGTLDNTLRLWNISSAKF-LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338
L+ + K E + E + + P + A+ D+ VRI+ +K
Sbjct: 272 LNSK--KLLQKLEGHTET--VMNVACHPTENLIASGSLDKTVRIWTQKK 316
Score = 71 (30.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 29/105 (27%), Positives = 45/105 (42%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIW--DTVQHRTVSSSWVHSAAH--GIVSVA 69
L H +V+ V F +L + + +R + +T+ ++ H GI VA
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTIND-PIAEPVQEFTGHENGISDVA 78
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFC 114
S ++S D T+K WD+E G L +L TN Y FC
Sbjct: 79 F--SSDARFIVSASDDKTLKLWDVETGSLIK--TLIGHTN-YAFC 118
Score = 68 (29.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 33/148 (22%), Positives = 56/148 (37%)
Query: 229 GFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 288
G + V + Y DG +WD T + PV + + + G D + L+
Sbjct: 167 GSLIVSSSY-DGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLW 225
Query: 289 NLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH 348
N+ + +N + S S+ +I + + D V ++ L L+ H
Sbjct: 226 NISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSE-DNCVHMWELNSKKLLQKLEGH 284
Query: 349 HATCNAVSFSSDCKLMASASEDSTVALW 376
T V+ L+AS S D TV +W
Sbjct: 285 TETVMNVACHPTENLIASGSLDKTVRIW 312
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 142 (55.0 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D S+ +WD++ G L + H +PV + + + +S D ++ D
Sbjct: 144 IVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DT 200
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HA 350
++G C +K I+ + P +S P+ K A D +++++Y KG L H
Sbjct: 201 ASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEK 259
Query: 351 TCNAVSFS-SDCKLMASASEDSTVALWEL 378
C +FS + K + S SED+ V +W L
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 34/146 (23%), Positives = 71/146 (48%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++ +D ++ +WD+ + G L +K H V C + + N +SG D+ + ++ D
Sbjct: 102 LVSASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DV 158
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYHHAT 351
TG C+ K + +S D + ++ +D RI++ G L ++ +
Sbjct: 159 KTGKCL--KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 352 CNAVSFSSDCKLMASASEDSTVALWE 377
+ V FS + K + +A+ D+T+ LW+
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 79 (32.9 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 32/116 (27%), Positives = 49/116 (42%)
Query: 4 RPPPPDPVAVLR----GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
+P P P L+ GH +V+ V F L + + ++IW + + H
Sbjct: 27 KPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 86
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS-YHFC 114
GI VA S N ++S D T+K WD+ +G T+K +S Y FC
Sbjct: 87 KL--GISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKCLK----TLKGHSNYVFC 134
Score = 37 (18.1 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 162 IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR 196
I DV + V+ ++IWD+++ +C +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG-KCLK 123
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 141 (54.7 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D S+ +WD++ G L + H +PV + + + +S D ++ D
Sbjct: 118 IVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DT 174
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HA 350
++G C +K I+ + P +S P+ K A D +++++Y KG L H
Sbjct: 175 ASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK 233
Query: 351 TCNAVSFS-SDCKLMASASEDSTVALWEL 378
C +FS + K + S SED+ V +W L
Sbjct: 234 YCIFANFSVTGGKWIVSGSEDNLVYIWNL 262
Score = 135 (52.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 34/146 (23%), Positives = 71/146 (48%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++ +D ++ +WD+ + G L +K H V C + + N +SG D+ + ++ D
Sbjct: 76 LVSASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DV 132
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYHHAT 351
TG C+ K + +S D + ++ +D RI++ G L ++ +
Sbjct: 133 KTGKCL--KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 190
Query: 352 CNAVSFSSDCKLMASASEDSTVALWE 377
+ V FS + K + +A+ D+T+ LW+
Sbjct: 191 VSFVKFSPNGKYILAATLDNTLKLWD 216
Score = 78 (32.5 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 32/116 (27%), Positives = 49/116 (42%)
Query: 4 RPPPPDPVAVLR----GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
+P P P L+ GH +V+ V F L + + ++IW + + H
Sbjct: 1 QPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 60
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS-YHFC 114
GI VA S N ++S D T+K WD+ +G T+K +S Y FC
Sbjct: 61 KL--GISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKCLK----TLKGHSNYVFC 108
Score = 37 (18.1 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 162 IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR 196
I DV + V+ ++IWD+++ +C +
Sbjct: 64 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG-KCLK 97
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 141 (54.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D S+ +WD++ G L + H +PV + + + +S D ++ D
Sbjct: 144 IVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DT 200
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HA 350
++G C +K I+ + P +S P+ K A D +++++Y KG L H
Sbjct: 201 ASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK 259
Query: 351 TCNAVSFS-SDCKLMASASEDSTVALWEL 378
C +FS + K + S SED+ V +W L
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 34/146 (23%), Positives = 71/146 (48%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++ +D ++ +WD+ + G L +K H V C + + N +SG D+ + ++ D
Sbjct: 102 LVSASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DV 158
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYHHAT 351
TG C+ K + +S D + ++ +D RI++ G L ++ +
Sbjct: 159 KTGKCL--KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 352 CNAVSFSSDCKLMASASEDSTVALWE 377
+ V FS + K + +A+ D+T+ LW+
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 79 (32.9 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 32/116 (27%), Positives = 49/116 (42%)
Query: 4 RPPPPDPVAVLR----GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
+P P P L+ GH +V+ V F L + + ++IW + + H
Sbjct: 27 KPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 86
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS-YHFC 114
GI VA S N ++S D T+K WD+ +G T+K +S Y FC
Sbjct: 87 KL--GISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKCLK----TLKGHSNYVFC 134
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 162 IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR 196
I DV + V+ ++IWD+++ +C +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG-KCLK 123
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 141 (54.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D S+ +WD++ G L + H +PV + + + +S D ++ D
Sbjct: 144 IVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DT 200
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HA 350
++G C +K I+ + P +S P+ K A D +++++Y KG L H
Sbjct: 201 ASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK 259
Query: 351 TCNAVSFS-SDCKLMASASEDSTVALWEL 378
C +FS + K + S SED+ V +W L
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 34/146 (23%), Positives = 71/146 (48%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++ +D ++ +WD+ + G L +K H V C + + N +SG D+ + ++ D
Sbjct: 102 LVSASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DV 158
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYHHAT 351
TG C+ K + +S D + ++ +D RI++ G L ++ +
Sbjct: 159 KTGKCL--KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 352 CNAVSFSSDCKLMASASEDSTVALWE 377
+ V FS + K + +A+ D+T+ LW+
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 79 (32.9 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 32/116 (27%), Positives = 49/116 (42%)
Query: 4 RPPPPDPVAVLR----GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
+P P P L+ GH +V+ V F L + + ++IW + + H
Sbjct: 27 KPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 86
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS-YHFC 114
GI VA S N ++S D T+K WD+ +G T+K +S Y FC
Sbjct: 87 KL--GISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKCLK----TLKGHSNYVFC 134
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 162 IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR 196
I DV + V+ ++IWD+++ +C +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG-KCLK 123
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 141 (54.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D S+ +WD++ G L + H +PV + + + +S D ++ D
Sbjct: 144 IVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DT 200
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HA 350
++G C +K I+ + P +S P+ K A D +++++Y KG L H
Sbjct: 201 ASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK 259
Query: 351 TCNAVSFS-SDCKLMASASEDSTVALWEL 378
C +FS + K + S SED+ V +W L
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 34/146 (23%), Positives = 71/146 (48%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++ +D ++ +WD+ + G L +K H V C + + N +SG D+ + ++ D
Sbjct: 102 LVSASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DV 158
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYHHAT 351
TG C+ K + +S D + ++ +D RI++ G L ++ +
Sbjct: 159 KTGKCL--KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 352 CNAVSFSSDCKLMASASEDSTVALWE 377
+ V FS + K + +A+ D+T+ LW+
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 79 (32.9 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 32/116 (27%), Positives = 49/116 (42%)
Query: 4 RPPPPDPVAVLR----GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
+P P P L+ GH +V+ V F L + + ++IW + + H
Sbjct: 27 KPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 86
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS-YHFC 114
GI VA S N ++S D T+K WD+ +G T+K +S Y FC
Sbjct: 87 KL--GISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKCLK----TLKGHSNYVFC 134
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 162 IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR 196
I DV + V+ ++IWD+++ +C +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG-KCLK 123
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 141 (54.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D S+ +WD++ G L + H +PV + + + +S D ++ D
Sbjct: 144 IVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DT 200
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HA 350
++G C +K I+ + P +S P+ K A D +++++Y KG L H
Sbjct: 201 ASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK 259
Query: 351 TCNAVSFS-SDCKLMASASEDSTVALWEL 378
C +FS + K + S SED+ V +W L
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 34/146 (23%), Positives = 71/146 (48%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++ +D ++ +WD+ + G L +K H V C + + N +SG D+ + ++ D
Sbjct: 102 LVSASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DV 158
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYHHAT 351
TG C+ K + +S D + ++ +D RI++ G L ++ +
Sbjct: 159 KTGKCL--KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 352 CNAVSFSSDCKLMASASEDSTVALWE 377
+ V FS + K + +A+ D+T+ LW+
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 79 (32.9 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 32/116 (27%), Positives = 49/116 (42%)
Query: 4 RPPPPDPVAVLR----GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
+P P P L+ GH +V+ V F L + + ++IW + + H
Sbjct: 27 KPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 86
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS-YHFC 114
GI VA S N ++S D T+K WD+ +G T+K +S Y FC
Sbjct: 87 KL--GISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKCLK----TLKGHSNYVFC 134
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 162 IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR 196
I DV + V+ ++IWD+++ +C +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG-KCLK 123
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 141 (54.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D S+ +WD++ G L + H +PV + + + +S D ++ D
Sbjct: 144 IVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DT 200
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HA 350
++G C +K I+ + P +S P+ K A D +++++Y KG L H
Sbjct: 201 ASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK 259
Query: 351 TCNAVSFS-SDCKLMASASEDSTVALWEL 378
C +FS + K + S SED+ V +W L
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 34/146 (23%), Positives = 71/146 (48%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++ +D ++ +WD+ + G L +K H V C + + N +SG D+ + ++ D
Sbjct: 102 LVSASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DV 158
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYHHAT 351
TG C+ K + +S D + ++ +D RI++ G L ++ +
Sbjct: 159 KTGKCL--KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 352 CNAVSFSSDCKLMASASEDSTVALWE 377
+ V FS + K + +A+ D+T+ LW+
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 79 (32.9 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 32/116 (27%), Positives = 49/116 (42%)
Query: 4 RPPPPDPVAVLR----GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
+P P P L+ GH +V+ V F L + + ++IW + + H
Sbjct: 27 KPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 86
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS-YHFC 114
GI VA S N ++S D T+K WD+ +G T+K +S Y FC
Sbjct: 87 KL--GISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKCLK----TLKGHSNYVFC 134
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 162 IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR 196
I DV + V+ ++IWD+++ +C +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG-KCLK 123
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 147 (56.8 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 40/151 (26%), Positives = 74/151 (49%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG--ISGGADQKIVLYNL 290
+++G D S+ +W+++ G L + H +P+ ++ + CNG +SG D ++
Sbjct: 138 IVSGSFDESVKIWEVKT-GKCLKTLSAHSDPISAVNFN--CNGSLIVSGSYDGLCRIW-- 192
Query: 291 DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH-- 348
D ++G C ++ + P +S P+ K TA D +++++Y +G L H
Sbjct: 193 DAASGQC-LRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKN 251
Query: 349 HATCNAVSFS-SDCKLMASASEDSTVALWEL 378
C SFS + K + S SED+ V +W L
Sbjct: 252 EKYCLFASFSVTGRKWVVSGSEDNMVYIWNL 282
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 36/146 (24%), Positives = 72/146 (49%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++ +D ++ VWD+R+ G L +K H + V C + N +SG D+ + ++ +
Sbjct: 96 LVSASDDKTLKVWDMRS-GKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV-- 152
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH-HAT 351
TG C+ K ++ IS + + + + +D RI++ G L L +
Sbjct: 153 KTGKCL--KTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPP 210
Query: 352 CNAVSFSSDCKLMASASEDSTVALWE 377
+ V FS + K + +A+ D+T+ LW+
Sbjct: 211 VSFVKFSPNGKYILTATLDNTLKLWD 236
Score = 71 (30.1 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 27/102 (26%), Positives = 44/102 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH A+++ V F L + + IW + + HS I VA S
Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLE--ISDVAW--S 90
Query: 74 IGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS-YHFC 114
++++S D T+K WD+ +G T+K +S + FC
Sbjct: 91 SDSSRLVSASDDKTLKVWDMRSGKCLK----TLKGHSDFVFC 128
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 151 (58.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 40/146 (27%), Positives = 77/146 (52%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V+ G +D S +W + L H + V C++ + N +G AD + L+
Sbjct: 554 VVTGSKDLSARLWSLEKEHA-LIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWC--- 609
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+T +++ + R ++ + PD K+ A AG + +VRI++ G+ LA LK H A+
Sbjct: 610 ATSGKLMRVFADC-RQAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAELKDHSASI 668
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
+++S+S+ + +A+A D T+ LW++
Sbjct: 669 SSLSWSTHNRHLATACSDGTLRLWDI 694
Score = 76 (31.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
LRGH VTDV F P++++ + +R W H ++ S + I + P
Sbjct: 493 LRGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRA--HNLHCAAIYRSHNYPIWCLDESP- 549
Query: 74 IGLNKVISQGRDGTVKCWDIE 94
+G V++ +D + + W +E
Sbjct: 550 VG-QYVVTGSKDLSARLWSLE 569
Score = 51 (23.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 25/130 (19%), Positives = 51/130 (39%)
Query: 100 SNPSLTIKTNSYHFCKLSLVKEPYANAKQ-ANEPKDCYEREVGETVDTDSLCDSKESNRS 158
S P++T+ T SL ++ +N K+ A EP E ++ + V+TD + + +
Sbjct: 302 SKPAVTLNTRGDIRPSKSLTEK--SNRKRPAEEPNIMLETDIKQEVETDESAELSKLQLN 359
Query: 159 FEIIDDVPAEGPKYMAVAGEQLSE-VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCM 217
+ D + + + +L + I + + L + C F + +
Sbjct: 360 IDACLDTLKSATEQILKSQVELPRFLRISERSRGLTSAHLDPSECHMLAGFDNSAVQLWQ 419
Query: 218 AVQAYLPSKS 227
Q+Y KS
Sbjct: 420 LNQSYCRGKS 429
Score = 42 (19.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 188 LNTAERCTRLHQNSCGGSPNF---SSKGRGMCMAVQAYL-PSKSQGFVNVLAGYEDGSIL 243
L+T + T S P F S + RG+ A+L PS+ ++LAG+++ ++
Sbjct: 364 LDTLKSATEQILKSQVELPRFLRISERSRGL---TSAHLDPSEC----HMLAGFDNSAVQ 416
Query: 244 VWDI 247
+W +
Sbjct: 417 LWQL 420
Score = 41 (19.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 81 SQGRDGTVKCWDIEN 95
S +D T++CW N
Sbjct: 514 SVSKDATMRCWRAHN 528
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 153 (58.9 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSI--DESCNGGISGGADQKIVLYNL 290
+ +G D ++ +W+ G+ + H + V+ +S D S G + KI
Sbjct: 362 IASGSNDRTVRIWETTT-GLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKI----W 416
Query: 291 DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
D TGS ++ + ++ S PDS++ A+A DR V+I++ GS L+ H+
Sbjct: 417 DTRTGS--LQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHND 474
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWE 377
+V FS D +L+ASAS+D TV +W+
Sbjct: 475 WVRSVVFSHDSRLIASASDDMTVKIWD 501
Score = 151 (58.2 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 40/139 (28%), Positives = 69/139 (49%)
Query: 238 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC 297
+DG++ +WD G +K H + V + SG D+ + ++ + +TG
Sbjct: 325 DDGTVKIWDTAT-GTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIW--ETTTG-- 379
Query: 298 VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSF 357
+++ + S DS+ A+A V+I++ R GS +L+ H N+VSF
Sbjct: 380 LLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSF 439
Query: 358 SSDCKLMASASEDSTVALW 376
S D +L+ASAS+D TV +W
Sbjct: 440 SPDSRLLASASDDRTVKIW 458
Score = 121 (47.7 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
DS++ A+A D V+I++ GS L+ H N+VSFS D +L+ASAS+D TV +W
Sbjct: 526 DSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 120 (47.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 37/145 (25%), Positives = 69/145 (47%)
Query: 234 LAGYEDG-SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
LA DG ++ +WD R + ++ H + V +S S D+ + +++
Sbjct: 404 LASASDGGNVKIWDTRTGSLQ-NVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHA-- 460
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+TGS +++ + + DS++ A+A D V+I++ L+ H
Sbjct: 461 ATGS--LQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWV 518
Query: 353 NAVSFSSDCKLMASASEDSTVALWE 377
+V FS D +L+ASAS+D TV +W+
Sbjct: 519 RSVVFSHDSRLLASASDDMTVKIWD 543
Score = 85 (35.0 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 26/87 (29%), Positives = 38/87 (43%)
Query: 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
A +GH +V V F +L + + G ++IWDT ++ H+ + SV
Sbjct: 257 AQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHN--EWVKSVVFS 314
Query: 72 PSIGLNKVISQGRDGTVKCWDIENGGL 98
L + S DGTVK WD G L
Sbjct: 315 HDSRL--LASASDDGTVKIWDTATGTL 339
Score = 83 (34.3 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 24/88 (27%), Positives = 37/88 (42%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
+L+GH SV V F ++ +G+ +RIW+T + H + VS A
Sbjct: 342 MLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDS 401
Query: 73 SIGLNKVISQGRDGTVKCWDIENGGLSS 100
++ S G VK WD G L +
Sbjct: 402 ----RRLASASDGGNVKIWDTRTGSLQN 425
Score = 68 (29.0 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 22/83 (26%), Positives = 33/83 (39%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH V V F +L + + G ++IWDT H+ + + SV
Sbjct: 301 LEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDS--VRSVVFSHD 358
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
L + S D TV+ W+ G
Sbjct: 359 SRL--IASGSNDRTVRIWETTTG 379
Score = 59 (25.8 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 25/94 (26%), Positives = 34/94 (36%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVS--SSWVHSAAHGIVS 67
VL GH V V F +L + + ++IW RT+ + WV S S
Sbjct: 426 VLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDS 485
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN 101
+ S D TVK WD L +N
Sbjct: 486 ---------RLIASASDDMTVKIWDTATVPLQNN 510
Score = 37 (18.1 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 6 PPPDPVAVLR 15
P PDP+A +R
Sbjct: 137 PEPDPLAAVR 146
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 144 (55.7 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 40/149 (26%), Positives = 71/149 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D S+ +WD+R G L + H +PV + + + +S D ++ D
Sbjct: 171 IVSGSFDESVRIWDVRT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DT 227
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HA 350
++G C +K I+ + P +S P+ K A D +++++Y KG L H
Sbjct: 228 ASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK 286
Query: 351 TCNAVSFS-SDCKLMASASEDSTVALWEL 378
C +FS + K + S SED+ V +W L
Sbjct: 287 YCIFANFSVTGGKWIVSGSEDNMVYIWNL 315
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 35/146 (23%), Positives = 72/146 (49%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G +D ++ VW++ + G L +K H V C + + N +SG D+ + ++ D
Sbjct: 129 LVSGSDDKTLKVWEL-STGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DV 185
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYHHAT 351
TG C+ K + +S D + ++ +D RI++ G L ++ +
Sbjct: 186 RTGKCL--KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 243
Query: 352 CNAVSFSSDCKLMASASEDSTVALWE 377
+ V FS + K + +A+ D+T+ LW+
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWD 269
Score = 66 (28.3 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 30/103 (29%), Positives = 45/103 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH +V+ V F L + + ++IW + + H GI VA
Sbjct: 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSSD 125
Query: 74 IGLNKVISQGRDGTVKCWDIENGGLSSNPSL-TIKTNS-YHFC 114
L ++S D T+K W+ LS+ SL T+K +S Y FC
Sbjct: 126 SRL--LVSGSDDKTLKVWE-----LSTGKSLKTLKGHSNYVFC 161
Score = 54 (24.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 34/147 (23%), Positives = 54/147 (36%)
Query: 58 VHSAAHGIVSVATGP-SIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIK-TNSYHFCK 115
VH + + +GP S+ N V G + LS P+ T+K T + H
Sbjct: 15 VHPPQQPLPTAPSGPNSLQPNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKA 74
Query: 116 LSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAV 175
+S VK A+ D + G D + S I DV + V
Sbjct: 75 VSAVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGI-SDVAWSSDSRLLV 130
Query: 176 AGEQLSEVEIWDLNTAERCTRL--HQN 200
+G +++W+L+T + L H N
Sbjct: 131 SGSDDKTLKVWELSTGKSLKTLKGHSN 157
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 116 (45.9 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F QT +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W++ G
Sbjct: 204 -G-DHIVSASRDKTMKMWEVATG 224
Score = 98 (39.6 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 23/101 (22%), Positives = 47/101 (46%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++++ STG C++ + + + G P + + D+ +RI++Y
Sbjct: 312 LSGSRDKTIKMWDI--STGMCLMTL-VGHDN-WVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + L H ++ F + + S D TV +WE
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 84 (34.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 27/94 (28%), Positives = 43/94 (45%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSA 61
P PP+ A L GHR+ VT V FH ++ + + +++WD RT+ H+
Sbjct: 96 PRPPEKYA-LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKG---HTD 151
Query: 62 AHGIVSV-ATGPSIGLNKVISQGRDGTVKCWDIE 94
+ +S TG + S D T+K WD +
Sbjct: 152 SVQDISFDQTGKLLA-----SCSADMTIKLWDFQ 180
Score = 77 (32.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/102 (28%), Positives = 43/102 (42%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIW---------DTVQHRTVSS--SWVH 59
V GHR V V +Q +L + + +R+W + +H V SW
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Query: 60 SAAHGIVSVATGPSIGLNK-----VISQGRDGTVKCWDIENG 96
+AH +S ATG + ++S RD T+K WDI G
Sbjct: 287 ESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTG 328
Score = 50 (22.7 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 21/105 (20%), Positives = 44/105 (41%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L+G D +I +WDI + G+ L + H V + +S D+ + ++ D+
Sbjct: 311 LLSGSRDKTIKMWDI-STGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIW--DY 367
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 337
C+ K ++ ++ S T D+ V+++ R
Sbjct: 368 KNKRCM--KTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 39 (18.8 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 311 LLSGSRDKTIKMWDI 325
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 135 (52.6 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 43/181 (23%), Positives = 82/181 (45%)
Query: 197 LHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 256
LH+ C + F+S +C+++ + V +G+ DG++ +WDI+ G L+
Sbjct: 339 LHKGYCTNTVLFTSNCNAICLSIDG---------LTVFSGHMDGNLRLWDIQT-GKLLSE 388
Query: 257 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC-VIKKEINLERPGISGTSI 315
+ H V +S+ + N ++ G D +++ + C ++ N S + I
Sbjct: 389 VAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDT-RTLEICGTLRASGNRLASNWSRSCI 447
Query: 316 RPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVAL 375
PD A D V +++ KG+ ++ILK + S+S K +ASA ++ V
Sbjct: 448 SPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCT 507
Query: 376 W 376
W
Sbjct: 508 W 508
Score = 80 (33.2 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 25/98 (25%), Positives = 41/98 (41%)
Query: 14 LRGHRASVTDVCF-HQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
L G ++ D+ H K ++ A T+ L +WD R + H+ V V+
Sbjct: 263 LYGSLGNILDMAVTHDNKSVI-AATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFS 321
Query: 73 SIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS 110
S V+S D T+K WD+ G ++ T N+
Sbjct: 322 S---RHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNA 356
Score = 46 (21.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 58 VHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98
+H+ G S+ + G + + G+D VK WD +G L
Sbjct: 221 IHAHEGGCGSIVFEYNSGT--LFTGGQDRAVKMWDTNSGTL 259
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 127 (49.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 33/133 (24%), Positives = 67/133 (50%)
Query: 248 RNPGIPLTAMKVHLEPV--LCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL 305
+ P P A K LE +C S ++ D + L+N ST I +
Sbjct: 344 KKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKP--IARMTGH 401
Query: 306 ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMA 365
++ ++ + PD + +A +D +++++ R G ++ + H A+ V++SSDC+L+
Sbjct: 402 QKL-VNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLV 460
Query: 366 SASEDSTVALWEL 378
S S+D+T+ +W++
Sbjct: 461 SCSKDTTLKVWDV 473
Score = 96 (38.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 42/148 (28%), Positives = 68/148 (45%)
Query: 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPV--LCLSIDESCNGGISGGADQKIVLYNLDH 292
+G D ++ VWDI + G + +K H V L LS D + G +K
Sbjct: 294 SGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKK-------P 346
Query: 293 STGSCVIKKEI-NLERP-GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA-LAILKYHH 349
ST KK + N E+ +G S ++ TA D + ++N K + +A + H
Sbjct: 347 STPEEAQKKALENYEKICKKNGNS----EEMMVTASDDYTMFLWNPLKSTKPIARMTGHQ 402
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWE 377
N V+FS D + + SAS D+++ LW+
Sbjct: 403 KLVNHVAFSPDGRYIVSASFDNSIKLWD 430
Score = 86 (35.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 14 LRGHRASVTDVCFHQ-------TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIV 66
LRGH +T + + +KP L + + G ++IWDTV V + + +
Sbjct: 225 LRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSR--VCQYTMSGHTNSVS 282
Query: 67 SVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYA 124
V G G + S D TV+ WDI + G N +K++++ LSL + YA
Sbjct: 283 CVKWG---GQGLLYSGSHDRTVRVWDINSQGRCIN---ILKSHAHWVNHLSLSTD-YA 333
Score = 86 (35.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 42/192 (21%), Positives = 79/192 (41%)
Query: 12 AVLRGHRASVTDVCFH-QTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+ + GH +++ F T + G RIWD + + H + ++ V+
Sbjct: 137 SAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHY--NWVLCVSW 194
Query: 71 GPSIGLNKVISQGR-DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQA 129
P +VI+ G D T++ WD ++G + ++ +S LS EP K
Sbjct: 195 SPD---GEVIATGSMDNTIRLWDPKSGQCLGD---ALRGHSKWITSLSW--EPIHLVKPG 246
Query: 130 NEPKDCYEREVGETV---DTDS-LCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEI 185
++P+ + G T+ DT S +C S + + G + + +G V +
Sbjct: 247 SKPRLASSSKDG-TIKIWDTVSRVCQYTMSGHTNSV--SCVKWGGQGLLYSGSHDRTVRV 303
Query: 186 WDLNTAERCTRL 197
WD+N+ RC +
Sbjct: 304 WDINSQGRCINI 315
Score = 76 (31.8 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS------SSWVHSAAH 63
P+ L+GH V V + ++ G+ +R+WD + + S W+ S +
Sbjct: 178 PMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSW 237
Query: 64 GIVSVATGPSIGLNKVISQGRDGTVKCWD 92
+ + S ++ S +DGT+K WD
Sbjct: 238 EPIHLVKPGS--KPRLASSSKDGTIKIWD 264
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 125 (49.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEP---VLCLSIDESCNGG--ISGGADQKIVL 287
+++G ++GSI VWD+ I T + L P V S+ S +GG ++ K +
Sbjct: 132 LISGDQNGSIRVWDL----ISNTCSR-ELVPDGEVGITSLTISSDGGLVVASNTKGKCFV 186
Query: 288 YNL-DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK 346
+ L + T ++I I T PD+K+ AT D V+I+N +K + + L
Sbjct: 187 WRLGEDDTSRFEPLQKIEAHNAPILKTLFSPDTKLLATCSADHTVKIWNTKKFNVVQTLN 246
Query: 347 YHHATCNAVSFSSDCKLMASASEDSTVALWELY 379
H +FS+D + + S D LW+L+
Sbjct: 247 GHQRWVWDCAFSNDSAYLVTGSSDHLSRLWDLH 279
Score = 80 (33.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P GH+ +VT V F + ++ G+ G ++IWD + + + + +V
Sbjct: 68 PAMSFDGHKGNVTGVGFQKEGKWMYTGSEDGTVKIWDL---KAPGCQRDYECSAPVNTVV 124
Query: 70 TGPSIGLNKVISQGRDGTVKCWDI 93
P+ ++IS ++G+++ WD+
Sbjct: 125 LHPNQA--ELISGDQNGSIRVWDL 146
Score = 62 (26.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 30/117 (25%), Positives = 44/117 (37%)
Query: 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETV 144
D T+K WD +GG + I +H +L + + A N +E
Sbjct: 12 DHTIKFWDPPSGGCYRS----IDCGEFHINRLEITHDKLYIAAAGNPQTRLFEVNTNNNS 67
Query: 145 DTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNS 201
S D + N + EG K+M E V+IWDL A C R ++ S
Sbjct: 68 PAMSF-DGHKGNVTGV---GFQKEG-KWMYTGSED-GTVKIWDLK-APGCQRDYECS 117
Score = 48 (22.0 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 85 DGTVKCWDIENGGLSSNPSLTIKTNS 110
DGTVK WD++ G + + N+
Sbjct: 97 DGTVKIWDLKAPGCQRDYECSAPVNT 122
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 130 (50.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 317 PDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
PDS+I A+A +D+ +++++ R G LA L+ H A +++S+D +L+ S S DST+ +W
Sbjct: 382 PDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 441
Query: 377 EL 378
++
Sbjct: 442 DV 443
Score = 81 (33.6 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 27/92 (29%), Positives = 41/92 (44%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH +V V F T L +G+ +R WD + H H ++S++ P
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHR--HWVLSISWSPD 167
Query: 74 IGLNKVISQGRDGTVKCWDIENGGLSSNPSLT 105
G K+ S ++G V WD + GL +LT
Sbjct: 168 -G-KKLASGCKNGQVLLWD-PSTGLQVGRTLT 196
Score = 80 (33.2 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 38/144 (26%), Positives = 63/144 (43%)
Query: 238 EDGSILVWDIRNPGIPLTAMKVHLEPV--LCLSIDESCNGGISGGADQKIVLYNLDHSTG 295
+D +I VW + G+ ++ H V + LS D + G A+ + N G
Sbjct: 265 QDRTIKVWRAHD-GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATV---NAQDLQG 320
Query: 296 SCVIKKEINLERPGISGTSIRPDSKIAATAGWDR-RVRIYNYRKGSA-LAILKYHHATCN 353
S KE+ ER +R +G D + +++ + LA + H A N
Sbjct: 321 SL---KELK-ERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALIN 376
Query: 354 AVSFSSDCKLMASASEDSTVALWE 377
V FS D +++ASAS D ++ LW+
Sbjct: 377 QVLFSPDSRIVASASFDKSIKLWD 400
Score = 67 (28.6 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 24/92 (26%), Positives = 39/92 (42%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HSAAHGIVSV 68
P +GHR V + + L +G G++ +WD V + HS I +
Sbjct: 148 PHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSK--WITGL 205
Query: 69 ATGPSIGLNK----VISQGRDGTVKCWDIENG 96
+ P + +N V S +DG+V+ WD G
Sbjct: 206 SWEP-LHMNPECRYVASSSKDGSVRVWDTTAG 236
Score = 67 (28.6 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 42/178 (23%), Positives = 72/178 (40%)
Query: 14 LRGHRASVTDVCF---HQTKPILFAGTTG--GELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
L GH +T + + H + ++ G +R+WDT R H+ + + +
Sbjct: 195 LTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQS--VTCL 252
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ 128
G GL + S +D T+K W +G L T++ + H+ + YA
Sbjct: 253 RWGGD-GL--LYSASQDRTIKVWRAHDGVLCR----TLQGHG-HWVNTMALSTDYALRTG 304
Query: 129 ANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIW 186
A EP E V SL + KE R+ + V +GP+ + V+G + +W
Sbjct: 305 AFEPA---EATVNAQDLQGSLKELKE--RASSRYNLVRGQGPERL-VSGSDDFTLFLW 356
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 164 (62.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 48/148 (32%), Positives = 74/148 (50%)
Query: 232 NVLA-GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 290
N+LA G D +I +WD G L ++ H + CL D++ ISG D+ I ++N
Sbjct: 360 NILATGSYDTTIKIWDTET-GEELRTLRGHESGIRCLQFDDTKL--ISGSMDRTIKVWNW 416
Query: 291 DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
TG C+ R G+ G D+ I A+ D+ V+I+N+ S + L+ H
Sbjct: 417 --RTGECI--STYTGHRGGVIGLHF--DASILASGSVDKTVKIWNFEDKSTFS-LRGHTD 469
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWEL 378
NAV + + + SAS+D TV LW+L
Sbjct: 470 WVNAVRVDTSSRTVFSASDDCTVRLWDL 497
Score = 48 (22.0 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 30/106 (28%), Positives = 48/106 (45%)
Query: 3 KRPPPPDPVAVLRGHRASV-TDVCFHQTKPILFAGTTGGELRIWDTV-QHR-TVSSSWVH 59
KR D VAV++ H +S+ +D + F T R W V + R V ++W
Sbjct: 283 KRKLEDDEVAVVKRHCSSLGSDAGVDKDSD--FFKT---RYRPWKEVYKDRFKVGTNW-- 335
Query: 60 SAAHGIVSVAT--GPSIGL------NKVISQGR-DGTVKCWDIENG 96
+G S+ T G + G+ + +++ G D T+K WD E G
Sbjct: 336 --KYGRCSIKTFKGHTNGVMCLQFEDNILATGSYDTTIKIWDTETG 379
Score = 41 (19.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 144 VDTDSLCDSKESNRSFEII--DDV 165
+DT SLC + + +R + + DDV
Sbjct: 196 LDTTSLCKASQVSRGWRALADDDV 219
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 145 (56.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 38/149 (25%), Positives = 73/149 (48%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D S+ +WD++ G+ + + H +PV +S + + SG D + ++ D
Sbjct: 186 VVSGSFDESVRIWDVKT-GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW--DT 242
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT- 351
+ G C IK ++ E P ++ P+ K + D ++++++ KG L H +
Sbjct: 243 ANGQC-IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSK 301
Query: 352 -CNAVSFS-SDCKLMASASEDSTVALWEL 378
C +FS + K + S SED + +W L
Sbjct: 302 YCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 43/185 (23%), Positives = 82/185 (44%)
Query: 200 NSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY-----EDGSILVWDIRNPGIP- 253
N+ G S + S+ + MC ++ + S S + Y D ++ +W++ +
Sbjct: 65 NAAGASASGSANYKLMC-TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICER 123
Query: 254 -LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312
LT K+ + + S D C +S D+ + ++ + S + +K N +
Sbjct: 124 TLTGHKLGVNDI-AWSSDSRCV--VSASDDKTLKIFEIVTSRMTKTLKGHNNY----VFC 176
Query: 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST 372
+ P S + + +D VRI++ + G + L H +AVSF+ D L+AS S D
Sbjct: 177 CNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL 236
Query: 373 VALWE 377
V +W+
Sbjct: 237 VRIWD 241
Score = 60 (26.2 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HSAAHGIVSVA 69
+ L GH S++ F L + ++IW+ + H + H G+ +A
Sbjct: 80 MCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWN-MDHMICERTLTGHKL--GVNDIA 136
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKT-NSYHFC 114
S V+S D T+K ++I ++S + T+K N+Y FC
Sbjct: 137 W--SSDSRCVVSASDDKTLKIFEI----VTSRMTKTLKGHNNYVFC 176
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 145 (56.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 38/149 (25%), Positives = 73/149 (48%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D S+ +WD++ G+ + + H +PV +S + + SG D + ++ D
Sbjct: 186 VVSGSFDESVRIWDVKT-GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW--DT 242
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT- 351
+ G C IK ++ E P ++ P+ K + D ++++++ KG L H +
Sbjct: 243 ANGQC-IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSK 301
Query: 352 -CNAVSFS-SDCKLMASASEDSTVALWEL 378
C +FS + K + S SED + +W L
Sbjct: 302 YCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 43/185 (23%), Positives = 82/185 (44%)
Query: 200 NSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY-----EDGSILVWDIRNPGIP- 253
N+ G S + S+ + MC ++ + S S + Y D ++ +W++ +
Sbjct: 65 NAAGASASGSANYKLMC-TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICER 123
Query: 254 -LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312
LT K+ + + S D C +S D+ + ++ + S + +K N +
Sbjct: 124 TLTGHKLGVNDI-AWSSDSRCV--VSASDDKTLKIFEIVTSRMTKTLKGHNNY----VFC 176
Query: 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST 372
+ P S + + +D VRI++ + G + L H +AVSF+ D L+AS S D
Sbjct: 177 CNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL 236
Query: 373 VALWE 377
V +W+
Sbjct: 237 VRIWD 241
Score = 60 (26.2 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HSAAHGIVSVA 69
+ L GH S++ F L + ++IW+ + H + H G+ +A
Sbjct: 80 MCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWN-MDHMICERTLTGHKL--GVNDIA 136
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKT-NSYHFC 114
S V+S D T+K ++I ++S + T+K N+Y FC
Sbjct: 137 W--SSDSRCVVSASDDKTLKIFEI----VTSRMTKTLKGHNNYVFC 176
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 130 (50.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 42/143 (29%), Positives = 64/143 (44%)
Query: 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV 298
D +I +WD+ G H VL +SI +SG D+ I ++N+ G+C
Sbjct: 84 DKTIRLWDLEK-GECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNI---IGNCK 139
Query: 299 IKKEINLERPGISGT--SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT-CNAV 355
+S S PD+ +AGWD+ V++++ S L Y H +AV
Sbjct: 140 YTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFS-LRTSHYGHTGYVSAV 198
Query: 356 SFSSDCKLMASASEDSTVALWEL 378
+ S D L AS D T+ LW+L
Sbjct: 199 TISPDGSLCASGGRDGTLMLWDL 221
Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 277 ISGGADQKIVLYNL---DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 333
+SG D+ I+L+NL D + G V ++ + +S ++ DS A +A WD+ +R+
Sbjct: 32 LSGSRDKSIILWNLVRDDVNYG--VAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRL 89
Query: 334 YNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
++ KG H + +VS S D + + S S D T+ +W +
Sbjct: 90 WDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNI 134
Score = 73 (30.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 23/89 (25%), Positives = 39/89 (43%)
Query: 12 AVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVS 67
A L GH VT + P IL +G+ + +W+ V+ V+ + +H +
Sbjct: 9 ATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSD 68
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENG 96
A S + +S D T++ WD+E G
Sbjct: 69 CAL--SFDSHYALSASWDKTIRLWDLEKG 95
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 117 (46.2 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 20/61 (32%), Positives = 40/61 (65%)
Query: 317 PDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
PD++I A+A +D+ ++++ R G L L+ H + +++S+D +L+ S S DST+ +W
Sbjct: 395 PDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVW 454
Query: 377 E 377
+
Sbjct: 455 D 455
Score = 94 (38.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 50/196 (25%), Positives = 84/196 (42%)
Query: 13 VLRGHRASVTDVCFH--QTKP---ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS 67
VL GH +T +C+ P L + + G +RIWDT+ R H+ + +
Sbjct: 207 VLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQS--VTC 264
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAK 127
V G GL + S +D T+K W ++G L T++ ++ H+ + Y
Sbjct: 265 VKWGGD-GL--LYSSSQDRTIKVWRSQDGILCR----TLQGHA-HWVNTMALSTDYVLRT 316
Query: 128 QANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIW- 186
A EP E + + SL + K+ ++ + D V +GP+ + V+G + +W
Sbjct: 317 GAFEPA---EATINPQDMSGSLAELKD--KAQQRYDKVRGQGPERL-VSGSDDFTLFLWR 370
Query: 187 ---DLNTAERCTRLHQ 199
D ER T HQ
Sbjct: 371 PAEDKKPLERMTG-HQ 385
Score = 78 (32.5 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 348 HHATCNAVSFSSDCKLMASASEDSTVALWE 377
H A N V FS D +++ASAS D ++ LWE
Sbjct: 384 HQALINQVLFSPDTRIIASASFDKSIKLWE 413
Score = 76 (31.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH +V V F T L +G+ +R WD ++ H H ++S+A P
Sbjct: 123 LEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHR--HWVLSIAWSPD 180
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G K+ S ++ + WD G
Sbjct: 181 -G-KKLASGCKNSQIFLWDPATG 201
Score = 54 (24.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 19/88 (21%), Positives = 35/88 (39%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HSAAHGIVSV 68
P +GHR V + + L +G ++ +WD + HS I +
Sbjct: 161 PQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSK--WITCL 218
Query: 69 ATGPSIGLNK----VISQGRDGTVKCWD 92
P + +N + S +DG+++ WD
Sbjct: 219 CWEP-LHINPECRYLASASKDGSIRIWD 245
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 129 (50.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 317 PDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
PDS+I A+A +D+ +++++ R G LA L+ H A +++S+D +L+ S S DST+ +W
Sbjct: 333 PDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 392
Query: 377 EL 378
++
Sbjct: 393 DV 394
Score = 85 (35.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 32/159 (20%), Positives = 66/159 (41%)
Query: 218 AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI 277
A++ Y + QG +++G +D ++ +W PL M H + +
Sbjct: 280 ALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIA 339
Query: 278 SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 337
S D+ I L+ D TG + ++ + + DS++ + D +++++ +
Sbjct: 340 SASFDKSIKLW--DGRTGKYLASLRGHVA--AVYQIAWSADSRLLVSGSSDSTLKVWDVK 395
Query: 338 KGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
A L H AV +S D + +AS +D + +W
Sbjct: 396 AQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 82 (33.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 48/202 (23%), Positives = 84/202 (41%)
Query: 186 WD-LNTAERCTRLHQNSCGGSPNFSSKGRGMCMAV-----QAYLPSKSQGFVNVLAGYED 239
W+ L+ C + +S GS G C + Q+ + G + + +D
Sbjct: 158 WEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQD 217
Query: 240 GSILVWDIRNPGIPLTAMKVHLEPV--LCLSIDESCNGGISGGADQKIVLYNLDHSTGSC 297
+I VW + G+ ++ H V + LS D + G A+ I N GS
Sbjct: 218 RTIKVWRAHD-GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASI---NAQDLQGSL 273
Query: 298 VIKKEINLERPG-ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA-LAILKYHHATCNAV 355
K+ L R + G P+ ++ + D + +++ + LA + H A N V
Sbjct: 274 QELKDRALRRYNLVRGQG--PERLVSGSD--DFTLFMWSPAEDKKPLARMTGHQALINQV 329
Query: 356 SFSSDCKLMASASEDSTVALWE 377
FS D +++ASAS D ++ LW+
Sbjct: 330 LFSPDSRIIASASFDKSIKLWD 351
Score = 79 (32.9 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 22/84 (26%), Positives = 36/84 (42%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH +V V F T L +G+ +R WD + H H ++S++ P
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHR--HWVLSISWSPD 118
Query: 74 IGLNKVISQG-RDGTVKCWDIENG 96
K ++ G ++G + WD G
Sbjct: 119 ---GKTLASGCKNGQILLWDPSTG 139
Score = 67 (28.6 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 41/179 (22%), Positives = 73/179 (40%)
Query: 13 VLRGHRASVTDVCFH--QTKP---ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS 67
VL GH +T + + P + + + G +R+WDT R H+ + +
Sbjct: 145 VLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQS--VTC 202
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAK 127
+ G GL + S +D T+K W +G L T++ + H+ + YA
Sbjct: 203 LRWGGD-GL--LYSASQDRTIKVWRAHDGVLCR----TLQGHG-HWVNTMALSTDYALRT 254
Query: 128 QANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIW 186
A EP E + SL + K+ R+ + V +GP+ + V+G + +W
Sbjct: 255 GAFEPA---EASINAQDLQGSLQELKD--RALRRYNLVRGQGPERL-VSGSDDFTLFMW 307
Score = 65 (27.9 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 21/89 (23%), Positives = 35/89 (39%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HSA-AHGIVS 67
P +GHR V + + L +G G++ +WD + V HS G+
Sbjct: 99 PHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSW 158
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENG 96
+ + S +DG+V+ WD G
Sbjct: 159 EPLHANPECRYMASSSKDGSVRVWDTTAG 187
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 146 (56.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 39/146 (26%), Positives = 64/146 (43%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G D ++ +WDI G+ K H + V+ ++ ISG D I ++N +
Sbjct: 86 LSGSWDNTLRLWDITK-GVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWN---T 141
Query: 294 TGSCVIKKE-INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
G C E + +S P++ + WD +V+I++ + L H
Sbjct: 142 LGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYV 201
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D+ LWEL
Sbjct: 202 NTVTISPDGSLCASGGKDTFACLWEL 227
Score = 116 (45.9 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 233 VLAGYEDGSILVWD-IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291
+++G D +I VW+ + L + H + V C+ + +SG D K+ ++++
Sbjct: 127 IISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDI- 185
Query: 292 HSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
+ C + G T +I PD + A+ G D ++ G L L+ +
Sbjct: 186 -KSFKC---NHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARN- 240
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWEL 378
T NA++FS + K SA+ D + +W+L
Sbjct: 241 TINALAFSPN-KYWLSAATDDKIIIWDL 267
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 26/102 (25%), Positives = 51/102 (50%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPG--ISGTSIRPDSKIAATAGWDRRVRIY 334
IS D+ ++++ L + + K +L+ + I D + A + WD +R++
Sbjct: 38 ISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLW 97
Query: 335 NYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
+ KG + + K H +V+FSSD + + S S D+T+ +W
Sbjct: 98 DITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVW 139
Score = 88 (36.0 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH V DV +G+ LR+WD + VS+ ++SVA S
Sbjct: 66 LKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDIT--KGVSTRLFKGHTQDVMSVAF--S 121
Query: 74 IGLNKVISQGRDGTVKCWD 92
++IS RD T+K W+
Sbjct: 122 SDNRQIISGSRDATIKVWN 140
Score = 55 (24.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 19/89 (21%), Positives = 30/89 (33%)
Query: 11 VAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
V L GH VT + P + + + + +W S H + G
Sbjct: 14 VGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFV 73
Query: 70 TGPSIGLNK--VISQGRDGTVKCWDIENG 96
I + +S D T++ WDI G
Sbjct: 74 QDVVISHDGQFALSGSWDNTLRLWDITKG 102
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 117 (46.2 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 37/147 (25%), Positives = 64/147 (43%)
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
F +++ ED +I VWD T +K H + V +S D + S AD I L+
Sbjct: 120 FSVIVSASEDATIKVWDHETGDFERT-LKGHTDSVQDISFDHTGKLLASCSADMTIKLW- 177
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D C+ + ++ +S +I P+ +A D+ ++++ G + H
Sbjct: 178 -DFQGFECI--RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHR 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALW 376
V + D L+AS+S D TV +W
Sbjct: 235 EWVRMVRPNQDGTLIASSSNDQTVRVW 261
Score = 113 (44.8 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F T +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVATG 224
Score = 95 (38.5 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 24/101 (23%), Positives = 45/101 (44%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++ D S G C++ + + + G + P K + D+ +RI++Y
Sbjct: 312 LSGSRDKTIKMW--DVSIGMCLMTL-VGHDN-WVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ L H ++ F + + S D TV +WE
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 88 (36.0 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 25/90 (27%), Positives = 38/90 (42%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHG 64
P PP+ A L GHR+ VT V FH ++ + + +++WD H T
Sbjct: 96 PRPPEKYA-LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWD---HETGDFERTLKGHTD 151
Query: 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
V + G + S D T+K WD +
Sbjct: 152 SVQDISFDHTG-KLLASCSADMTIKLWDFQ 180
Score = 70 (29.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/102 (25%), Positives = 42/102 (41%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIW---------DTVQHRTVSS--SWVH 59
V GHR V V +Q ++ + + +R+W + +H V SW
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Query: 60 SAAHGIVSVATGPSIGLNK-----VISQGRDGTVKCWDIENG 96
+AH + ATG + ++S RD T+K WD+ G
Sbjct: 287 ESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIG 328
Score = 46 (21.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 19/105 (18%), Positives = 44/105 (41%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L+G D +I +WD+ + G+ L + H V + + +S D+ + ++ D+
Sbjct: 311 LLSGSRDKTIKMWDV-SIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIW--DY 367
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 337
C K ++ ++ + T D+ V+++ R
Sbjct: 368 KNKRCT--KTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 311 LLSGSRDKTIKMWDV 325
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 130 (50.8 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 317 PDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
PDS+I A+A +D+ +++++ R G LA L+ H A +++S+D +L+ S S DST+ +W
Sbjct: 382 PDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 441
Query: 377 EL 378
++
Sbjct: 442 DV 443
Score = 87 (35.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 35/160 (21%), Positives = 68/160 (42%)
Query: 218 AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI 277
A+ Y + QG +++G +D ++ +W PLT M H + +
Sbjct: 329 ALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVA 388
Query: 278 SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 337
S D+ I L+ D TG + ++ + + DS++ + D +++++
Sbjct: 389 SASFDKSIKLW--DGRTGKYLASLRGHVA--AVYQIAWSADSRLLVSGSSDSTLKVWDV- 443
Query: 338 KGSALAI-LKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
K LA+ L H AV +S D + +AS +D + +W
Sbjct: 444 KAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 78 (32.5 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH +V V F T L +G+ +R WD + H H ++S++ P
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHR--HWVLSISWSPD 167
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G K+ S ++G + WD G
Sbjct: 168 -G-RKLASGCKNGQILLWDPSTG 188
Score = 70 (29.7 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 43/178 (24%), Positives = 72/178 (40%)
Query: 14 LRGHRASVTDVCF---HQTKPILFAGTTG--GELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
L GH +T + + H + ++ G +RIWDT R H+ + + +
Sbjct: 195 LAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQS--VTCL 252
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ 128
G GL + S +D T+K W +G L T++ + H+ + YA
Sbjct: 253 RWGGD-GL--LYSASQDRTIKVWRAHDGVLCR----TLQGHG-HWVNTMALSTDYALRTG 304
Query: 129 ANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIW 186
A EP E V SL + KE R+ + V +GP+ + V+G + +W
Sbjct: 305 AFEPA---EASVNPQDLQGSLQELKE--RALSRYNLVRGQGPERL-VSGSDDFTLFLW 356
Score = 69 (29.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 22/89 (24%), Positives = 36/89 (40%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HSA-AHGIVS 67
P +GHR V + + L +G G++ +WD + V + HS G+
Sbjct: 148 PHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSW 207
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENG 96
+ V S +DG+V+ WD G
Sbjct: 208 EPLHANPECRYVASSSKDGSVRIWDTTAG 236
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 130 (50.8 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 317 PDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
PDS+I A+A +D+ +++++ R G LA L+ H A +++S+D +L+ S S DST+ +W
Sbjct: 384 PDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 443
Query: 377 EL 378
++
Sbjct: 444 DV 445
Score = 78 (32.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH +V V F T L +G+ +R WD + H H ++S++ P
Sbjct: 112 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHR--HWVLSISWSPD 169
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G K+ S ++G + WD G
Sbjct: 170 -G-KKLASGCKNGQILLWDPSTG 190
Score = 71 (30.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 24/93 (25%), Positives = 40/93 (43%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD----TVQHRTVS--SSWVHSAAH 63
P +GHR V + + L +G G++ +WD T RT++ S W+ +
Sbjct: 150 PHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSW 209
Query: 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96
+ + P V S +DG+V+ WD G
Sbjct: 210 EPLHM--NPEC--RYVASSSKDGSVRVWDTTAG 238
Score = 67 (28.6 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 42/178 (23%), Positives = 72/178 (40%)
Query: 14 LRGHRASVTDVCF---HQTKPILFAGTTG--GELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
L GH +T + + H + ++ G +R+WDT R H+ + + +
Sbjct: 197 LTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQS--VTCL 254
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ 128
G GL + S +D T+K W +G L T++ + H+ + YA
Sbjct: 255 RWGGD-GL--LYSASQDRTIKVWRAHDGVLCR----TLQGHG-HWVNTMALSTDYALRTG 306
Query: 129 ANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIW 186
A EP E V SL + KE R+ + V +GP+ + V+G + +W
Sbjct: 307 AFEPA---EATVNAQDLQGSLKELKE--RASSRYNLVRGQGPERL-VSGSDDFTLFLW 358
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 129 (50.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 317 PDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
PDS+I A+A +D+ +++++ R G LA L+ H A +++S+D +L+ S S DST+ +W
Sbjct: 382 PDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 441
Query: 377 EL 378
++
Sbjct: 442 DV 443
Score = 84 (34.6 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 31/159 (19%), Positives = 65/159 (40%)
Query: 218 AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI 277
A+ Y + +G +++G +D ++ +W PL M H + +
Sbjct: 329 ALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIA 388
Query: 278 SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 337
S D+ I L+ D TG + ++ + + DS++ + D +++++ +
Sbjct: 389 SASFDKSIKLW--DGRTGKYLASLRGHVA--AVYQIAWSADSRLLVSGSSDSTLKVWDVK 444
Query: 338 KGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
A L H AV +S D + +AS +D + +W
Sbjct: 445 AQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 81 (33.6 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 52/224 (23%), Positives = 93/224 (41%)
Query: 166 PAEGPKY-MAVAGEQLSEVEI-WD-LNTAERCTRLHQNSCGGSPNFSSKGRGMCMAV--- 219
P+ G + A+AG + W+ L+ C + +S GS G C +
Sbjct: 185 PSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTG 244
Query: 220 --QAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV--LCLSIDESCNG 275
Q+ + G + + +D +I VW + G+ ++ H V + LS D +
Sbjct: 245 HTQSVTCLRWGGDGLLYSASQDRTIKVWRAHD-GVLCRTLQGHGHWVNTMALSTDYALRT 303
Query: 276 GISGGADQKIVLYNLDHSTGSCVIKKEINLERPG-ISGTSIRPDSKIAATAGWDRRVRIY 334
G A+ + N GS KE L R + G + ++ + + D + ++
Sbjct: 304 GAFEPAEASV---NAQDLRGSLQELKERALSRYNLVRGRGLE---RLVSGSD-DFTLFLW 356
Query: 335 NYRKGSA-LAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + LA + H A N V FS D +++ASAS D ++ LW+
Sbjct: 357 SPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWD 400
Score = 79 (32.9 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH +V V F T L +G+ +R WD + H H ++S++ P
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHR--HWVLSISWSPD 167
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G K+ S ++G + WD G
Sbjct: 168 -G-KKLASGCKNGQILLWDPSTG 188
Score = 69 (29.3 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 24/92 (26%), Positives = 40/92 (43%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HSAAHGIVSV 68
P +GHR V + + L +G G++ +WD + V + HS I ++
Sbjct: 148 PHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSK--WITAL 205
Query: 69 ATGPSIGLNK----VISQGRDGTVKCWDIENG 96
+ P + N V S +DG+V+ WD G
Sbjct: 206 SWEP-LHANPECRYVASSSKDGSVRVWDTTAG 236
Score = 59 (25.8 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 29/126 (23%), Positives = 51/126 (40%)
Query: 14 LRGHRASVTDVCF---HQTKPILFAGTTG--GELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
L GH +T + + H + ++ G +R+WDT R H+ + + +
Sbjct: 195 LAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQS--VTCL 252
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ 128
G GL + S +D T+K W +G L T++ + H+ + YA
Sbjct: 253 RWGGD-GL--LYSASQDRTIKVWRAHDGVLCR----TLQGHG-HWVNTMALSTDYALRTG 304
Query: 129 ANEPKD 134
A EP +
Sbjct: 305 AFEPAE 310
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 109 (43.4 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 42/152 (27%), Positives = 72/152 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D I VWD+R + T M+ H + V LS+ + +S D + ++++
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 293 STGS--CV--IKKEI-NLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYRKGSALAILK 346
CV + + N E+ + S PD SKIAA + DR V +++ L L
Sbjct: 268 FAPKERCVKIFQGNVHNFEK-NLLRCSWSPDGSKIAAGSA-DRFVYVWDTTSRRVLYKLP 325
Query: 347 YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H + N V+F D ++ SAS D + + E+
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 96 (38.9 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDI 93
GP + V + DGTVK WDI
Sbjct: 161 ARRGPQL----VCTGSDDGTVKLWDI 182
Score = 72 (30.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/88 (21%), Positives = 47/88 (53%)
Query: 14 LRGHRASVTDVCFHQTK-P-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
L+GH + V C+ + P ++ G+ G +++WD ++ + ++ ++ + +++V
Sbjct: 148 LKGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWD-IRKKAAVQTFQNT--YQVLAVTFN 203
Query: 72 PSIGLNKVISQGRDGTVKCWDIENGGLS 99
+ +++IS G D +K WD+ L+
Sbjct: 204 DTS--DQIISGGIDNDIKVWDLRQNKLT 229
Score = 54 (24.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 24/91 (26%), Positives = 34/91 (37%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIW----DTVQHRTVSSSWVHSAAHGI 65
P+ +L GH V FH L + + +W D + T+ HS A
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG---HSGAVME 115
Query: 66 VSVATGPSIGLNKVISQGRDGTVKCWDIENG 96
+ T S+ + S D TV WD E G
Sbjct: 116 LHYNTDGSM----LFSASTDKTVAVWDSETG 142
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 128 (50.1 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 22/62 (35%), Positives = 43/62 (69%)
Query: 317 PDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
PDS++ A+A +D+ +++++ R G LA L+ H A +++S+D +L+ S S DST+ +W
Sbjct: 383 PDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 442
Query: 377 EL 378
++
Sbjct: 443 DV 444
Score = 82 (33.9 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 38/144 (26%), Positives = 65/144 (45%)
Query: 238 EDGSILVWDIRNPGIPLTAMKVHLEPV--LCLSIDESCNGGISGGADQKIVLYNLDHSTG 295
+D +I VW + G+ ++ H V + LS D + G A+ + N G
Sbjct: 266 QDRTIKVWRAHD-GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASV---NAQDLRG 321
Query: 296 SCVIKKEINLERPG-ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA-LAILKYHHATCN 353
S KE L R + G P+ ++ + D + +++ + LA + H A N
Sbjct: 322 SLQELKERALSRYNLVRGQG--PERLVSGSD--DFTLFLWSPAEDKKPLARMTGHQALIN 377
Query: 354 AVSFSSDCKLMASASEDSTVALWE 377
V FS D +++ASAS D ++ LW+
Sbjct: 378 QVVFSPDSRVIASASFDKSIKLWD 401
Score = 79 (32.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH +V V F T L +G+ +R WD + H H ++S++ P
Sbjct: 111 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHR--HWVLSISWSPD 168
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G K+ S ++G + WD G
Sbjct: 169 -G-KKLASGCKNGQILLWDPSTG 189
Score = 74 (31.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 43/178 (24%), Positives = 72/178 (40%)
Query: 14 LRGHRASVTDVCF---HQTKPILFAGTTG--GELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
L GH +T + + H + ++ G +R+WDT R + H A + +
Sbjct: 196 LTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGH--AQSVTCL 253
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ 128
G GL + S +D T+K W +G L T++ + H+ + YA
Sbjct: 254 RWGGD-GL--LYSASQDRTIKVWRAHDGVLCR----TLQGHG-HWVNTMALSTDYALRTG 305
Query: 129 ANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIW 186
A EP E V SL + KE R+ + V +GP+ + V+G + +W
Sbjct: 306 AFEPA---EASVNAQDLRGSLQELKE--RALSRYNLVRGQGPERL-VSGSDDFTLFLW 357
Score = 69 (29.3 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 24/92 (26%), Positives = 40/92 (43%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HSAAHGIVSV 68
P +GHR V + + L +G G++ +WD + V + HS I ++
Sbjct: 149 PHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSK--WITAL 206
Query: 69 ATGPSIGLNK----VISQGRDGTVKCWDIENG 96
+ P + N V S +DG+V+ WD G
Sbjct: 207 SWEP-LHANPECRYVASSSKDGSVRVWDTTAG 237
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 108 (43.1 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 42/152 (27%), Positives = 72/152 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D I VWD+R + T M+ H + V LS+ + +S D + ++++
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 266
Query: 293 STGS--CV--IKKEI-NLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYRKGSALAILK 346
CV + + N E+ + S PD SKIAA + DR V +++ L L
Sbjct: 267 FAPKERCVKIFQGNVHNFEK-NLLRCSWSPDGSKIAAGSA-DRFVYVWDTTSRRILYKLP 324
Query: 347 YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H + N V+F D ++ SAS D + + E+
Sbjct: 325 GHAGSINEVAFHPDEPIIISASSDKRLYMGEI 356
Score = 96 (38.9 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 100 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 159
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDI 93
GP + V + DGTVK WDI
Sbjct: 160 ARRGPQL----VCTGSDDGTVKLWDI 181
Score = 72 (30.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 19/88 (21%), Positives = 47/88 (53%)
Query: 14 LRGHRASVTDVCFHQTK-P-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
L+GH + V C+ + P ++ G+ G +++WD ++ + ++ ++ + +++V
Sbjct: 147 LKGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWD-IRKKAAIQTFQNT--YQVLAVTFN 202
Query: 72 PSIGLNKVISQGRDGTVKCWDIENGGLS 99
+ +++IS G D +K WD+ L+
Sbjct: 203 DTS--DQIISGGIDNDIKVWDLRQNKLT 228
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 24/91 (26%), Positives = 34/91 (37%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIW----DTVQHRTVSSSWVHSAAHGI 65
P+ +L GH V FH L + + +W D + T+ HS A
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG---HSGAVME 114
Query: 66 VSVATGPSIGLNKVISQGRDGTVKCWDIENG 96
+ T S+ + S D TV WD E G
Sbjct: 115 LHYNTDGSM----LFSASTDKTVAVWDSETG 141
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 108 (43.1 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 42/152 (27%), Positives = 72/152 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D I VWD+R + T M+ H + V LS+ + +S D + ++++
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 293 STGS--CV--IKKEI-NLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYRKGSALAILK 346
CV + + N E+ + S PD SKIAA + DR V +++ L L
Sbjct: 268 FAPKERCVKIFQGNVHNFEK-NLLRCSWSPDGSKIAAGSA-DRFVYVWDTTSRRILYKLP 325
Query: 347 YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H + N V+F D ++ SAS D + + E+
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 96 (38.9 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDI 93
GP + V + DGTVK WDI
Sbjct: 161 ARRGPQL----VCTGSDDGTVKLWDI 182
Score = 72 (30.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 19/88 (21%), Positives = 47/88 (53%)
Query: 14 LRGHRASVTDVCFHQTK-P-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
L+GH + V C+ + P ++ G+ G +++WD ++ + ++ ++ + +++V
Sbjct: 148 LKGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWD-IRKKAAIQTFQNT--YQVLAVTFN 203
Query: 72 PSIGLNKVISQGRDGTVKCWDIENGGLS 99
+ +++IS G D +K WD+ L+
Sbjct: 204 DTS--DQIISGGIDNDIKVWDLRQNKLT 229
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 24/91 (26%), Positives = 34/91 (37%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIW----DTVQHRTVSSSWVHSAAHGI 65
P+ +L GH V FH L + + +W D + T+ HS A
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG---HSGAVME 115
Query: 66 VSVATGPSIGLNKVISQGRDGTVKCWDIENG 96
+ T S+ + S D TV WD E G
Sbjct: 116 LHYNTDGSM----LFSASTDKTVAVWDSETG 142
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 108 (43.1 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 42/152 (27%), Positives = 72/152 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D I VWD+R + T M+ H + V LS+ + +S D + ++++
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 293 STGS--CV--IKKEI-NLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYRKGSALAILK 346
CV + + N E+ + S PD SKIAA + DR V +++ L L
Sbjct: 268 FAPKERCVRIFQGNVHNFEK-NLLRCSWSPDGSKIAAGSA-DRFVYVWDTTSRRILYKLP 325
Query: 347 YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H + N V+F D ++ SAS D + + E+
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 96 (38.9 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDI 93
GP + V + DGTVK WDI
Sbjct: 161 ARRGPQL----VCTGSDDGTVKLWDI 182
Score = 72 (30.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 19/88 (21%), Positives = 47/88 (53%)
Query: 14 LRGHRASVTDVCFHQTK-P-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
L+GH + V C+ + P ++ G+ G +++WD ++ + ++ ++ + +++V
Sbjct: 148 LKGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWD-IRKKAAIQTFQNT--YQVLAVTFN 203
Query: 72 PSIGLNKVISQGRDGTVKCWDIENGGLS 99
+ +++IS G D +K WD+ L+
Sbjct: 204 DTS--DQIISGGIDNDIKVWDLRQNKLT 229
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 24/91 (26%), Positives = 34/91 (37%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIW----DTVQHRTVSSSWVHSAAHGI 65
P+ +L GH V FH L + + +W D + T+ HS A
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG---HSGAVME 115
Query: 66 VSVATGPSIGLNKVISQGRDGTVKCWDIENG 96
+ T S+ + S D TV WD E G
Sbjct: 116 LHYNTDGSM----LFSASTDKTVAVWDSETG 142
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 108 (43.1 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 42/152 (27%), Positives = 72/152 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D I VWD+R + T M+ H + V LS+ + +S D + ++++
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 293 STGS--CV--IKKEI-NLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYRKGSALAILK 346
CV + + N E+ + S PD SKIAA + DR V +++ L L
Sbjct: 268 FAPKERCVKIFQGNVHNFEK-NLLRCSWSPDGSKIAAGSA-DRFVYVWDTTSRRILYKLP 325
Query: 347 YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H + N V+F D ++ SAS D + + E+
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 96 (38.9 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDI 93
GP + V + DGTVK WDI
Sbjct: 161 ARRGPQL----VCTGSDDGTVKLWDI 182
Score = 72 (30.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 19/88 (21%), Positives = 47/88 (53%)
Query: 14 LRGHRASVTDVCFHQTK-P-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
L+GH + V C+ + P ++ G+ G +++WD ++ + ++ ++ + +++V
Sbjct: 148 LKGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWD-IRKKAAIQTFQNT--YQVLAVTFN 203
Query: 72 PSIGLNKVISQGRDGTVKCWDIENGGLS 99
+ +++IS G D +K WD+ L+
Sbjct: 204 DTS--DQIISGGIDNDIKVWDLRQNKLT 229
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 24/91 (26%), Positives = 34/91 (37%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIW----DTVQHRTVSSSWVHSAAHGI 65
P+ +L GH V FH L + + +W D + T+ HS A
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG---HSGAVME 115
Query: 66 VSVATGPSIGLNKVISQGRDGTVKCWDIENG 96
+ T S+ + S D TV WD E G
Sbjct: 116 LHYNTDGSM----LFSASTDKTVAVWDSETG 142
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 121 (47.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 25/98 (25%), Positives = 51/98 (52%)
Query: 281 ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS 340
A +Y D + S + + + ++ ++ + PD A+AG+D V+++N R G
Sbjct: 380 ASDDFTMYLWDPESSSKPVARLLGHQKE-VNHVTFSPDMAYIASAGFDNHVKLWNGRDGK 438
Query: 341 ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ L+ H FS+D +L+ S+S+D+T+ +W +
Sbjct: 439 FITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNV 476
Score = 87 (35.7 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 26/144 (18%), Positives = 59/144 (40%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++ +D ++ +WD + P+ + H + V ++ S G D + L+N
Sbjct: 377 LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRD 436
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
++ + + DS++ ++ D ++++N R G L H
Sbjct: 437 GKFITTLRGHVG----AVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEV 492
Query: 353 NAVSFSSDCKLMASASEDSTVALW 376
AV +S D + + S +D + +W
Sbjct: 493 FAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 85 (35.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 22/88 (25%), Positives = 41/88 (46%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P+ L+GH + V V + ++ G+ +RIWD + + + + + I S+A
Sbjct: 183 PLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAP-LKGHVKWITSLA 241
Query: 70 TGP----SIGLNKVISQGRDGTVKCWDI 93
P G ++ S +D TV+ WD+
Sbjct: 242 WEPYHLQQSGHPRLASASKDSTVRIWDV 269
Score = 76 (31.8 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 27/94 (28%), Positives = 43/94 (45%)
Query: 12 AVLRGHRASVTDVC---FHQTK---PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGI 65
A L+GH +T + +H + P L + + +RIWD + R + V S G
Sbjct: 228 APLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKR---ADIVLSGHKGS 284
Query: 66 VS-VATGPSIGLNKVISQGRDGTVKCWDIENGGL 98
V+ V G G K+ + D T+K W+ + G L
Sbjct: 285 VTCVRWG---GTGKIYTSSHDRTIKVWNSQTGTL 315
Score = 67 (28.6 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 12 AVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
A + GH ++ F + + +G+ RIWD + + H++ +++V+
Sbjct: 142 ASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTS--WVLAVSY 199
Query: 71 GPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQAN 130
P+ + + + D TV+ WD + G P +K + SL EPY + +Q+
Sbjct: 200 SPNGAM--IATGSMDNTVRIWDAKKGQALGAP---LKGHVKWIT--SLAWEPY-HLQQSG 251
Query: 131 EPK 133
P+
Sbjct: 252 HPR 254
Score = 58 (25.5 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 37 TTGGELRIWDTVQH----RTVSSSWVHSAAHGIVSVATGPS-IGLNKVISQGRDGTVKCW 91
TT ++++ T Q + VS A HG +AT S + + ++S D T + W
Sbjct: 117 TTEDTIQLYFTPQAIFRVKAVSRCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIW 176
Query: 92 DIENG 96
D + G
Sbjct: 177 DCDTG 181
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 148 (57.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/149 (26%), Positives = 74/149 (49%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D S+ +WD+R G+ + + H +PV +S + + SG D + ++ D
Sbjct: 178 VVSGSFDESVRIWDVRT-GMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW--DT 234
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT- 351
+ G CV K ++ E P ++ P+ K ++ D ++++++ KG L + H
Sbjct: 235 ANGQCV-KTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNK 293
Query: 352 -CNAVSFS-SDCKLMASASEDSTVALWEL 378
C +FS + K + S SED + +W L
Sbjct: 294 YCIFANFSVTGGKWIISGSEDCKIYVWNL 322
Score = 120 (47.3 bits), Expect = 0.00019, P = 0.00019
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 232 NVLAGYEDGSILVWDIRNPGIPLT-AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 290
+++ +D ++ ++++ P + + +K H V C + + + +SG D+ + ++
Sbjct: 135 SIVTASDDKTLKIYEV--PTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW-- 190
Query: 291 DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYHH 349
D TG CV K + +S S D + + +D VRI++ G + ++ +
Sbjct: 191 DVRTGMCV--KTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDEN 248
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWE 377
V FS + K + S++ D+T+ LW+
Sbjct: 249 PPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Score = 50 (22.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 24/107 (22%), Positives = 45/107 (42%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIW---DTVQHRTVSSSWVHSAAHGIVS 67
++ + GH S++ V F L + ++IW D RT++ H G+
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTG---HKL--GVND 126
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFC 114
A S +++ D T+K +++ ++ +L TN Y FC
Sbjct: 127 FAW--SADSKSIVTASDDKTLKIYEVPTVKMAK--TLKGHTN-YVFC 168
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 46/153 (30%), Positives = 79/153 (51%)
Query: 232 NVLA-GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG--ISGGADQKIVLY 288
N LA G ED ++ VWDI I T L+ S+D S +G +SG D+K ++
Sbjct: 340 NYLATGAEDKTVKVWDIHTKKIQHTFYGHELD---IYSLDYSSDGRFIVSGSGDKKAKIW 396
Query: 289 NLDHSTGSCVI---KKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL 345
+++ G C +E+ + G++ ++ PD ++ A D VR+++ + G L
Sbjct: 397 DIEK--GKCAFTLGNEEVG-PKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERY 453
Query: 346 KYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ H + +V+FS D K +AS S D ++ LW+L
Sbjct: 454 EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDL 486
Score = 104 (41.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 34/148 (22%), Positives = 63/148 (42%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V AG D + +WD + G L + HL+ V ++ SG D+ + L++L
Sbjct: 430 VAAGSLDNIVRLWDAQT-GYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSG 488
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
S + N + + + PD + DR V+ ++ R G+ +L+ H +
Sbjct: 489 SRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSV 548
Query: 353 NAVSFS---SDCKLMASASEDSTVALWE 377
+V+ S + + A+ S D LW+
Sbjct: 549 ISVALSPKNNSHGVFATGSGDFRSRLWK 576
Score = 69 (29.3 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 19/85 (22%), Positives = 39/85 (45%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSWVHSAAHGIVSVATGP 72
GH + + + + +G+ + +IWD + + T+ + V +G+ SVA P
Sbjct: 367 GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEV-GPKNGVTSVAMSP 425
Query: 73 SIGLNKVISQGR-DGTVKCWDIENG 96
++++ G D V+ WD + G
Sbjct: 426 D---GRLVAAGSLDNIVRLWDAQTG 447
Score = 59 (25.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 20/76 (26%), Positives = 30/76 (39%)
Query: 21 VTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI 80
+ VCF L G +++WD + + + H I S+ S G ++
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHEL--DIYSLDYS-SDG-RFIV 385
Query: 81 SQGRDGTVKCWDIENG 96
S D K WDIE G
Sbjct: 386 SGSGDKKAKIWDIEKG 401
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 131 (51.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 30/102 (29%), Positives = 60/102 (58%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+S D +++L++ ST I K ++ + ++ S PD + ATA +D VR+++
Sbjct: 362 VSASDDLQLILWDPQKSTKP--ITK-MHGHQKVVNHASFSPDGRCIATASFDSSVRLWDG 418
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ G LA L+ H A ++S+D +L+ S+S+D+T+ +W++
Sbjct: 419 KTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDV 460
Score = 87 (35.7 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 38/172 (22%), Positives = 71/172 (41%)
Query: 207 NFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV-- 264
+FS + R A + Y Q +++ +D +++WD + P+T M H + V
Sbjct: 338 SFSDERR---KAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNH 394
Query: 265 LCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 324
S D C S D + L+ D TG + ++ + + DS++ +
Sbjct: 395 ASFSPDGRCIATAS--FDSSVRLW--DGKTGKFLATLRGHVA--AVYQCAWSTDSRLLVS 448
Query: 325 AGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
+ D +++++ R L H AV +S D + +AS D V +W
Sbjct: 449 SSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 73 (30.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 5 PPPPDPVA-VLRGHRASVTDVCF---H---QTKPILFA-GTTGGELRIWDTVQHRTVSSS 56
P P+ LR H + +C+ H + P L A G+ +RIW+ V+ RT+ +
Sbjct: 206 PKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWN-VKLRTLLFT 264
Query: 57 WV-HSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96
H+A I V G G N + S D T++ WD ++G
Sbjct: 265 LSGHTAP--ITCVRWG---GQNWIYSSSYDKTIRIWDAKDG 300
Score = 72 (30.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 19/90 (21%), Positives = 40/90 (44%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P+A ++GH V+ V + I+ G+ +R WD + + + + I+++
Sbjct: 169 PIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDA-LRRHTKPIMALC 227
Query: 70 -----TGPSIGLNKVISQGRDGTVKCWDIE 94
P G + S +D TV+ W+++
Sbjct: 228 WQPLHLAPDSGPYLLASGSKDNTVRIWNVK 257
Score = 65 (27.9 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 19/86 (22%), Positives = 36/86 (41%)
Query: 12 AVLRGHRASVTDVCFH-QTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
A + GH ++ F T L G+ R+WD +++ H+ + + VA
Sbjct: 128 ASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHT--NWVSCVAW 185
Query: 71 GPSIGLNKVISQGRDGTVKCWDIENG 96
P + + + D T++ WD + G
Sbjct: 186 APDASI--IATGSMDNTIRFWDPKKG 209
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
L GH A +T V + I ++ + +RIWD + + H+A +S++T
Sbjct: 265 LSGHTAPITCVRWGGQNWI-YSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLST 320
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 75/381 (19%), Positives = 148/381 (38%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+AV GH + + + F T L +G+ +++W+ + V + V + I V
Sbjct: 182 MAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNG 241
Query: 71 GPSIGLNKVI-SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQA 129
P K++ + G + WD ++G +P + T+S + +V P++
Sbjct: 242 QPE---EKILYTAGEGNLILAWDWKSGS-RLDPGVDT-THSETNAIIQVV--PFSENTLL 294
Query: 130 NEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLN 189
+ D + + V + K+ N SF+ + D G ++AV S E D+
Sbjct: 295 SVHSDL-SLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVC----SNTEFIDVI 349
Query: 190 TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249
+ + G+ F G V L S G V + G +D ++ +W++
Sbjct: 350 STD-----------GTQVFGVL-EGHTDIVLT-LDSSEDG-VWLATGAKDNTVRLWNLNI 395
Query: 250 PGIPLTAMKV---HLEPVLCLSIDE-SCNGG----ISGGADQKIVLYNLDHSTGSCVIKK 301
+ V H V +++ NG S D+ + +NL
Sbjct: 396 EDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSN 455
Query: 302 E----INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSF 357
I ++ + D +I A+A D+ +++++ G + +L+ H A SF
Sbjct: 456 RAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSF 515
Query: 358 SSDCKLMASASEDSTVALWEL 378
+ + +AS S D T+ +W +
Sbjct: 516 NPFSRQLASGSGDRTIRIWNV 536
Score = 113 (44.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 59/250 (23%), Positives = 99/250 (39%)
Query: 135 CYEREVGETVDTDS--LCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAE 192
C E + + TD + E + + D +G ++A G + + V +W+LN +
Sbjct: 340 CSNTEFIDVISTDGTQVFGVLEGHTDIVLTLDSSEDGV-WLAT-GAKDNTVRLWNLNIED 397
Query: 193 RCTRLHQNSCGGSPNFSSKGRGMCMAVQAY---LPSKSQGFVNVLAGYEDGSIL-VWDIR 248
+ G + + ++ G + V Y L S SQ L + GS L D
Sbjct: 398 NVYKCIHVFTGHTASVTAVALGP-LDVNGYPTFLASSSQD--RTLKRFNLGSQLNKSDFS 454
Query: 249 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 308
N + +K H V + + + +G I A Q + D STG V + R
Sbjct: 455 NRAV--WTIKAHDRDVNAIQVSK--DGRIIASASQDKTIKLWDSSTGEVV--GVLRGHRR 508
Query: 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASAS 368
G+ S P S+ A+ DR +RI+N + L+ H + + S + SA+
Sbjct: 509 GVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAA 568
Query: 369 EDSTVALWEL 378
D V +W L
Sbjct: 569 ADGLVKVWSL 578
Score = 97 (39.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 15 RGHRASVTDVCF--HQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA-HGIVSVATG 71
RGH ++ +CF HQ +L +G +R+WD R+++ HS+ G+ TG
Sbjct: 142 RGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTG 201
Query: 72 PSIGLNKVISQGRDGTVKCWDIE 94
+ +S RD TV+ W+I+
Sbjct: 202 SFL-----LSGSRDKTVQVWNIK 219
Score = 95 (38.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/145 (22%), Positives = 65/145 (44%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+ + +D +I +WD + G + ++ H V S + SG D+ I ++N+D
Sbjct: 480 IASASQDKTIKLWD-SSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVD- 537
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
T CV E + + I +++ + A D V++++ G +A L H
Sbjct: 538 -TQQCVQTLEGHTGAI-LKLIYISQGTQVVSAAA-DGLVKVWSLSSGECVATLDNHEDRV 594
Query: 353 NAVSFSSDCKLMASASEDSTVALWE 377
A++ D L+ S D+ V++W+
Sbjct: 595 WALASRFDGSLLVSGGADAVVSVWK 619
Score = 63 (27.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HS-AAHG-IVSVAT 70
++ H V + T +L G G +++WD ++ ++V HS HG ++S
Sbjct: 99 MKAHETPVITMTIDPTNTLLATGGAEGLVKVWD------IAGAYVTHSFRGHGGVISALC 152
Query: 71 GPSIGLNKVISQGRDGT-VKCWDIEN 95
V++ G D + V+ WD+ +
Sbjct: 153 FGKHQNTWVLASGADDSRVRLWDLNS 178
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 123 (48.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 300 KKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS 359
KK + + ++ PD K A+A +D+ VR++N G + + + H VS+S+
Sbjct: 353 KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA 412
Query: 360 DCKLMASASEDSTVALWEL 378
D +L+ S S+DST+ +WE+
Sbjct: 413 DSRLLLSGSKDSTLKIWEI 431
Score = 80 (33.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
+ GH +V V F L +G+ +R+WD + + H + +++VA P
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHK--NWVLTVAWSPD 162
Query: 74 IGLNKVISQGRDGTVKCWDIENGGLSSNP 102
G + ++S + G + CW+ + G L +P
Sbjct: 163 -GKH-LVSGSKSGEICCWNPKKGELEGSP 189
Score = 68 (29.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 22/90 (24%), Positives = 40/90 (44%)
Query: 14 LRGHRASVTDVCF---HQTKPI--LFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
L GH+ +T + + H + P + G+ RIWD +++ H+ A + V
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLA--VTCV 247
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGL 98
G G+ + + +D T+K W+ G L
Sbjct: 248 KWGGD-GI--IYTGSQDCTIKMWETTQGKL 274
Score = 65 (27.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 19/87 (21%), Positives = 37/87 (42%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P+ +GH+ V V + L +G+ GE+ W+ + + S + I ++
Sbjct: 143 PLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGE-LEGSPLTGHKKWITGIS 201
Query: 70 TGP---SIGLNKVISQGRDGTVKCWDI 93
P S + ++ +DG + WDI
Sbjct: 202 WEPVHLSSPCRRFVTSSKDGDARIWDI 228
Score = 53 (23.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
+ L GH +VT V + I++ G+ +++W+T Q + + H H I S+A
Sbjct: 234 IICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHG--HWINSLA 289
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 114 (45.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE 369
I+ S+ P+ I ATA +D+ +I+N G A L H VSF KL+A++S
Sbjct: 494 INALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSG 553
Query: 370 DSTVALWEL 378
D TV +W L
Sbjct: 554 DKTVKIWSL 562
Score = 95 (38.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 15 RGHRASVTDVCFH---QTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVH-SAAHG--IVS 67
+GH +++ + F+ +K +L +G T G +++WD V+ + + + H SA G I+
Sbjct: 141 KGHGGTISSLKFYGQLNSKIWLLASGDTNGMVKVWDLVKRKCLHTLQEHTSAVRGLDIIE 200
Query: 68 VATGPSIGLNKVISQGRDGTVKCWD 92
V LN ++S GRD + WD
Sbjct: 201 VPDNDEPSLN-LLSGGRDDIINLWD 224
Score = 94 (38.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 46/194 (23%), Positives = 85/194 (43%)
Query: 196 RLHQNSCGGSPNFSSKGRGMCMAVQAY-LPS-KSQGFVN-VLAGYEDGSILVWDIRNP-- 250
R ++NSC + +K G AV A LP+ S+G+ +L D +I W I P
Sbjct: 416 RYNENSC--KFDIYAKYIGHSAAVTAVGLPNIVSKGYPEFLLTASNDLTIKKWIIPKPTA 473
Query: 251 GIPLTAMKV-------HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI 303
+ + +KV H + + LS+ + + + D+ ++NL++ +
Sbjct: 474 SMDVQIIKVSEYTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLA--- 530
Query: 304 NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKL 363
N +R G+ S K+ AT+ D+ V+I++ S + L+ H SF + K
Sbjct: 531 NHKR-GLWDVSFCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQ 589
Query: 364 MASASEDSTVALWE 377
+ S D + +W+
Sbjct: 590 LISCGADGLIKIWD 603
Score = 72 (30.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 30/143 (20%), Positives = 58/143 (40%)
Query: 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 294
A Y D + +W++ N + T H + +S + + D+ + +++LD T
Sbjct: 509 ASY-DKTCKIWNLENGELEATLAN-HKRGLWDVSFCQYDKLLATSSGDKTVKIWSLD--T 564
Query: 295 GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA 354
S + K + + S K + G D ++I++ G L L H+ A
Sbjct: 565 FS--VMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSGECLKTLDGHNNRLWA 622
Query: 355 VSFSSDCKLMASASEDSTVALWE 377
+S +D ++ SA D W+
Sbjct: 623 LSTMNDGDMIVSADADGVFQFWK 645
Score = 57 (25.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 172 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV 231
++ +G+ V++WDL +C LH +S RG+ + ++ +P + +
Sbjct: 161 WLLASGDTNGMVKVWDL-VKRKC--LHTLQ-----EHTSAVRGLDI-IE--VPDNDEPSL 209
Query: 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSID---ESCNGGISGGADQKIVLY 288
N+L+G D I +WD MK + + L ++ ESC G + G D K ++Y
Sbjct: 210 NLLSGGRDDIINLWDFN--------MKKKCKLLKTLPVNQQVESC-GFLKDG-DGKRIIY 259
Score = 52 (23.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 26/121 (21%), Positives = 52/121 (42%)
Query: 83 GRDGTVKCWDIENGGLSSN---PSLTIKTNSYHF---CKLSLVKEPYANAKQANEPKDCY 136
G DG++ DIENG ++ + TI + ++ K+ L+ N + D
Sbjct: 121 GTDGSIIVVDIENGYITHSFKGHGGTISSLKFYGQLNSKIWLLASGDTNGMV--KVWDLV 178
Query: 137 EREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR 196
+R+ T+ + + R +II+ + P ++G + + +WD N ++C
Sbjct: 179 KRKCLHTLQ-----EHTSAVRGLDIIEVPDNDEPSLNLLSGGRDDIINLWDFNMKKKCKL 233
Query: 197 L 197
L
Sbjct: 234 L 234
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 134 (52.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 40/141 (28%), Positives = 67/141 (47%)
Query: 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG--ISGGADQKIVLYNLDHSTGS 296
D VWD+R G + + H++PV S++ S NG SGG D + +++L
Sbjct: 402 DSLARVWDLRT-GRSILVFQGHIKPVF--SVNFSPNGYHLASGGEDNQCRIWDLRMRKSL 458
Query: 297 CVIKKEINLERPGISGTSIRP-DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAV 355
+I NL +S P + ATA +D +V I++ R S + L H + ++
Sbjct: 459 YIIPAHANL----VSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASL 514
Query: 356 SFSSDCKLMASASEDSTVALW 376
++D +A+ S D T+ LW
Sbjct: 515 DITADSSCIATVSHDRTIKLW 535
Score = 100 (40.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/88 (26%), Positives = 48/88 (54%)
Query: 291 DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
D +TG+ ++ +E + + G + + D +AA+ G D R+++ R G ++ + + H
Sbjct: 367 DINTGAELLLQEGHSR--SVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIK 424
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWEL 378
+V+FS + +AS ED+ +W+L
Sbjct: 425 PVFSVNFSPNGYHLASGGEDNQCRIWDL 452
Score = 68 (29.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 24/93 (25%), Positives = 38/93 (40%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHG 64
P + +AVL+ H+ TDV F L + ++W T T+ ++
Sbjct: 285 PQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKT--DGTLLQTF-EGHLDR 341
Query: 65 IVSVATGPSIGLNKVI-SQGRDGTVKCWDIENG 96
+ VA PS K + + D T + WDI G
Sbjct: 342 LARVAFHPS---GKYLGTTSYDKTWRLWDINTG 371
Score = 54 (24.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 23/84 (27%), Positives = 32/84 (38%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGEL--RIWDTVQHRTVSSSWVHS-AAHGIVSVATGP 72
GH + V FH + L GTT + R+WD + HS + +GI G
Sbjct: 337 GHLDRLARVAFHPSGKYL--GTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGA 394
Query: 73 SIGLNKVISQGRDGTVKCWDIENG 96
S G D + WD+ G
Sbjct: 395 LAA-----SCGLDSLARVWDLRTG 413
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 136 (52.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 281 ADQKIVLYNLDH-STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG 339
A +Y D + G+ I + I ++ ++ + PD + A+AGWD +++N R G
Sbjct: 387 ASDDFTMYLFDPLNDGTKPIARMIGHQKQ-VNHVTFSPDGSMIASAGWDNATKLWNARDG 445
Query: 340 SALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ L+ H A SFS+D +L+ +AS+D+T+ +W +
Sbjct: 446 KFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNV 484
Score = 65 (27.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 30/92 (32%), Positives = 38/92 (41%)
Query: 14 LRGHRASVTDVCF---HQTK---PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS 67
L+GH V + + H + P L + + RIW TV T + V S G VS
Sbjct: 234 LKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIW-TVN--TGRTEHVLSGHKGSVS 290
Query: 68 -VATGPSIGLNKVISQGRDGTVKCWDIENGGL 98
V G G V + D TVK WD G L
Sbjct: 291 CVRWGAGNGTGVVYTASHDKTVKVWDAVKGTL 322
Score = 65 (27.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 22/91 (24%), Positives = 36/91 (39%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P L+GH V V + L + +RIWD + V S + A + +A
Sbjct: 187 PKHTLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSE-LKGHAKWVQGIA 245
Query: 70 TGP----SIGLNKVISQGRDGTVKCWDIENG 96
P G +++S +D T + W + G
Sbjct: 246 WEPLHLWRDGTPRLVSASKDFTARIWTVNTG 276
Score = 43 (20.2 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 63 HG--IVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIK 107
HG I+ P+ G D T + WD E G P T+K
Sbjct: 151 HGEPILCAQFSPASSARLATGSG-DNTARIWDAETG----TPKHTLK 192
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 135 (52.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 38/149 (25%), Positives = 71/149 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D +I +W+++ G + +K H P+ + + + +S D ++ D
Sbjct: 143 IVSGSFDETIRIWEVKT-GKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW--DA 199
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HA 350
G+C +K I+ + P +S P+ K A D +++ NY G L + H
Sbjct: 200 KEGTC-LKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKV 258
Query: 351 TCNAVSFS-SDCKLMASASEDSTVALWEL 378
C +FS ++ K + S SED+ V LW+L
Sbjct: 259 FCITSAFSVTNGKYIVSGSEDNCVYLWDL 287
Score = 59 (25.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 17/82 (20%), Positives = 36/82 (43%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-HRTVSSSWVHSAAHGIVSVATGPSI 74
GH + ++D+ + + + LRIWD + + H+ + + V P
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHT--NFVFCVNFNPPS 140
Query: 75 GLNKVISQGRDGTVKCWDIENG 96
L ++S D T++ W+++ G
Sbjct: 141 NL--IVSGSFDETIRIWEVKTG 160
Score = 58 (25.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH A+++ V F +L + + + +W + + HS+ GI +A S
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSS--GISDLAW--S 94
Query: 74 IGLNKVISQGRDGTVKCWD 92
+ S D T++ WD
Sbjct: 95 SDSHYTCSASDDCTLRIWD 113
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 132 (51.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 39/147 (26%), Positives = 61/147 (41%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 79 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 134
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V ++N H
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTNHIGHTGY 194
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 113 F--SSDNRQIVSGSRDKTIKLWN 133
Score = 89 (36.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNL 179
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 180 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 235 II-NALCFSPNRYWLCAATGPS-IKIWDL 261
Score = 61 (26.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 20/87 (22%), Positives = 37/87 (42%)
Query: 14 LRGHRASVTDVCFH-QTKPILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + H +T+ + + + +W + T + + +H + V
Sbjct: 11 LKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 71 IS-SDG-QFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 117 (46.2 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 39/155 (25%), Positives = 64/155 (41%)
Query: 225 SKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQK 284
S Q FV +D ++ VW L ++ H+ V C +S D+
Sbjct: 113 SDGQSFVTAS---DDKTVKVWSTHRQKF-LFSLSQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 285 IVLYNLDHSTGSCVIKKEINLERPG-ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA 343
+ L+ D ++ CV E G ++ P A AG D V++++ R L
Sbjct: 169 VKLW--DKTSRECV---HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 223
Query: 344 ILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ H A NA+SF + +AS DST+ + +L
Sbjct: 224 HYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 258
Score = 81 (33.6 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 305 LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM 364
L ++ S P TA D ++I + +G L L H V+FS +
Sbjct: 227 LHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 286
Query: 365 ASASEDSTVALWE 377
AS D V +W+
Sbjct: 287 ASGGSDEQVMVWK 299
Score = 79 (32.9 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 34/114 (29%), Positives = 46/114 (40%)
Query: 7 PPDPVAV--LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH- 63
P DP +GHR +VT V F L +G+ L +W H + A H
Sbjct: 6 PEDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVW----HMKPQTRAYRFAGHK 61
Query: 64 -GIVSVATGPSIGLNKVISQGRDGTVKCWDIEN--GGLSSNPSLTIKTNSYHFC 114
+ V PS L + S RD TV+ W + N G + + T S HFC
Sbjct: 62 DAVTCVNFSPSGHL--LASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC 112
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 134 (52.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 79 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 134
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V+++N H
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 113 F--SSDNRQIVSGSRDKTIKLWN 133
Score = 90 (36.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 180 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 235 II-NALCFSPNRYWLCAATGPS-IKIWDL 261
Score = 56 (24.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + P ++ + + + +W + T + + +H + V
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 71 IS-SDG-QFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 134 (52.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 79 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 134
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V+++N H
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 113 F--SSDNRQIVSGSRDKTIKLWN 133
Score = 90 (36.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 180 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 235 II-NALCFSPNRYWLCAATGPS-IKIWDL 261
Score = 56 (24.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + P ++ + + + +W + T + + +H + V
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 71 IS-SDG-QFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 134 (52.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 79 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 134
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V+++N H
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 113 F--SSDNRQIVSGSRDKTIKLWN 133
Score = 90 (36.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 180 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 235 II-NALCFSPNRYWLCAATGPS-IKIWDL 261
Score = 56 (24.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + P ++ + + + +W + T + + +H + V
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 71 IS-SDG-QFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 134 (52.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 79 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 134
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V+++N H
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 113 F--SSDNRQIVSGSRDKTIKLWN 133
Score = 90 (36.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 180 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 235 II-NALCFSPNRYWLCAATGPS-IKIWDL 261
Score = 56 (24.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + P ++ + + + +W + T + + +H + V
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 71 IS-SDG-QFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 134 (52.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 79 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 134
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V+++N H
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 113 F--SSDNRQIVSGSRDKTIKLWN 133
Score = 90 (36.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 180 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 235 II-NALCFSPNRYWLCAATGPS-IKIWDL 261
Score = 56 (24.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + P ++ + + + +W + T + + +H + V
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 71 IS-SDG-QFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 134 (52.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 79 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 134
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V+++N H
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 113 F--SSDNRQIVSGSRDKTIKLWN 133
Score = 90 (36.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 180 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 235 II-NALCFSPNRYWLCAATGPS-IKIWDL 261
Score = 56 (24.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + P ++ + + + +W + T + + +H + V
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 71 IS-SDG-QFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 134 (52.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 79 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 134
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V+++N H
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 113 F--SSDNRQIVSGSRDKTIKLWN 133
Score = 90 (36.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 180 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 235 II-NALCFSPNRYWLCAATGPS-IKIWDL 261
Score = 56 (24.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + P ++ + + + +W + T + + +H + V
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 71 IS-SDG-QFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 134 (52.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 79 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 134
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V+++N H
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 113 F--SSDNRQIVSGSRDKTIKLWN 133
Score = 90 (36.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 180 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 235 II-NALCFSPNRYWLCAATGPS-IKIWDL 261
Score = 56 (24.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + P ++ + + + +W + T + + +H + V
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 71 IS-SDG-QFALSGSWDGTLRLWDLTTG 95
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 134 (52.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 79 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 134
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V+++N H
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 113 F--SSDNRQIVSGSRDKTIKLWN 133
Score = 90 (36.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 180 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 235 II-NALCFSPNRYWLCAATGPS-IKIWDL 261
Score = 56 (24.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + P ++ + + + +W + T + + +H + V
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 71 IS-SDG-QFALSGSWDGTLRLWDLTTG 95
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 134 (52.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 79 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 134
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V+++N H
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 113 F--SSDNRQIVSGSRDKTIKLWN 133
Score = 90 (36.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 180 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 235 II-NALCFSPNRYWLCAATGPS-IKIWDL 261
Score = 56 (24.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + P ++ + + + +W + T + + +H + V
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 71 IS-SDG-QFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 134 (52.2 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 82 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 137
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V+++N H
Sbjct: 138 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 197
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 198 LNTVTVSPDGSLCASGGKDGQAMLWDL 224
Score = 97 (39.2 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 58 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 115
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 116 F--SSDNRQIVSGSRDKTIKLWN 136
Score = 90 (36.7 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 123 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 182
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 183 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 237
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 238 II-NALCFSPNRYWLCAATGPS-IKIWDL 264
Score = 56 (24.8 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + P ++ + + + +W + T + + +H + V
Sbjct: 14 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 73
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 74 IS-SDG-QFALSGSWDGTLRLWDLTTG 98
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 125 (49.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 60/273 (21%), Positives = 119/273 (43%)
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDS--LCDSKESNRSFE-IIDDVPAEGPKYMAVA 176
++P A AKQ + P T T+S + E ++S + II +P + K +
Sbjct: 106 RKPAATAKQTSTPT---------TTSTESKPTIEEMEIDKSIDNIIKSLPKQDEKRRKIE 156
Query: 177 GEQLSEVEIWD-LNTAE--RCTRLHQNS--CGGSPNFSSKGRGMCMA------VQAYLPS 225
++ S++ I++ NT + T ++Q P + + M + V+A
Sbjct: 157 DDKSSQITIYNKTNTDDINNRTLINQYEPLTYTKPEWHPPWKLMRVISGHTGWVRAIAVD 216
Query: 226 KSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKI 285
KS + G D +I VWD+ + + +T + H+ + L + S G D K+
Sbjct: 217 KSNEWF--ATGSTDNTIKVWDLASGELKVT-LTGHVSAIRGLEVSSRHPYLFSVGEDNKV 273
Query: 286 VLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL 345
+ ++L+ + ++ R G+ ++ P + + G D VR+++ R + + +
Sbjct: 274 LCWDLESNKQ---VRNYYG-HRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEM 329
Query: 346 KYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
K H T ++ + + S S D+TV LW+L
Sbjct: 330 KGHKGTILSLKSQNADPQVISGSMDTTVKLWDL 362
Score = 108 (43.1 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 32/145 (22%), Positives = 64/145 (44%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+ +G D + VWD+R + MK H +L L + ISG D + L++L
Sbjct: 306 LFSGGRDNCVRVWDMRTRA-NIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLAT 364
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
T + + + G+ I AT D ++ + GS + L H++
Sbjct: 365 GTSAATLTNH----KKGVRSMVIHEKEYSFATGAADN-IKQWKCPDGSFIKNLSGHNSII 419
Query: 353 NAVSFSSDCKLMASASEDSTVALWE 377
NA++ ++D ++ S ++ +++ W+
Sbjct: 420 NAMALNAD-NVLVSGGDNGSISFWD 443
Score = 91 (37.1 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH +++ + P LF+ ++ WD ++ V + + H G+ SVA P+
Sbjct: 245 LTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHR--QGVYSVALHPT 302
Query: 74 IGLNKVISQGRDGTVKCWDI 93
L+ + S GRD V+ WD+
Sbjct: 303 --LDVLFSGGRDNCVRVWDM 320
Score = 84 (34.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 23/91 (25%), Positives = 38/91 (41%)
Query: 6 PPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH-SAAHG 64
PP + V+ GH V + ++ G+T +++WD + H SA G
Sbjct: 195 PPWKLMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRG 254
Query: 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95
+ + P + S G D V CWD+E+
Sbjct: 255 LEVSSRHPYL-----FSVGEDNKVLCWDLES 280
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 112 (44.5 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 33/145 (22%), Positives = 63/145 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
++ G D +++VWD + G + + H + S + C+ ++G D+ L+ D
Sbjct: 234 IITGSFDHTVVVWDA-DTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLW--DA 290
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ G CV + I + K+ ATA D RI++ +A L+ H
Sbjct: 291 TNGKCVAT--LTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEI 348
Query: 353 NAVSFSSDCKLMASASEDSTVALWE 377
+ +SF+ + + S D T +W+
Sbjct: 349 SKISFNPQGNHLLTGSSDKTARIWD 373
Score = 101 (40.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/144 (22%), Positives = 63/144 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L G D + +WD N G + + H + +L D + + AD +++
Sbjct: 276 ILTGSMDKTCKLWDATN-GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSA-- 332
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+T C+ K E + IS S P T D+ RI++ + G L +L+ H
Sbjct: 333 ATRKCIAKLEGH--EGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEI 390
Query: 353 NAVSFSSDCKLMASASEDSTVALW 376
+ +F+ ++ + S+D+T +W
Sbjct: 391 FSCAFNYKGNIVITGSKDNTCRIW 414
Score = 100 (40.3 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 32/145 (22%), Positives = 59/145 (40%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+ G D + +W + G + H ++CLS + +G D L+++ +
Sbjct: 150 IATGSFDKTCKLWSVET-GKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQN 208
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
++ + E I S T +D V +++ G + IL H A
Sbjct: 209 GEEVYTLRGH-SAE---IISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEI 264
Query: 353 NAVSFSSDCKLMASASEDSTVALWE 377
++ SF+ DC L+ + S D T LW+
Sbjct: 265 SSASFNWDCSLILTGSMDKTCKLWD 289
Score = 84 (34.6 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI 74
RGH A + + F+ ++ G+ ++WD V + HSA I+S++ S
Sbjct: 174 RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAE--IISLSFNTS- 230
Query: 75 GLNKVISQGRDGTVKCWDIENG 96
G +++I+ D TV WD + G
Sbjct: 231 G-DRIITGSFDHTVVVWDADTG 251
Score = 80 (33.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 24/88 (27%), Positives = 38/88 (43%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
+ V LRGH A + + F+ + + G+ + +WD R V+ H A I S
Sbjct: 210 EEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAE--ISSA 267
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENG 96
+ L +++ D T K WD NG
Sbjct: 268 SFNWDCSL--ILTGSMDKTCKLWDATNG 293
Score = 77 (32.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/84 (22%), Positives = 38/84 (45%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VL+ H +T+V +++ G+ ++WDT +++ H + ++A
Sbjct: 87 VLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNV--VYAIAFNN 144
Query: 73 SIGLNKVISQGRDGTVKCWDIENG 96
G +K+ + D T K W +E G
Sbjct: 145 PYG-DKIATGSFDKTCKLWSVETG 167
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 146 (56.5 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 39/126 (30%), Positives = 62/126 (49%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312
PL HL V C + N +G +D+ + L+ D G+CV + + I
Sbjct: 575 PLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLW--DVLNGNCV--RIFTGHKGPIHS 630
Query: 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST 372
+ P+ K A+ D RV +++ G +A LK H T A+ FS D +++AS S D+T
Sbjct: 631 LAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNT 690
Query: 373 VALWEL 378
V LW++
Sbjct: 691 VRLWDV 696
Score = 143 (55.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 40/146 (27%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L+ EDG+I +W ++ L K H PV +SGG D+ L+ DH
Sbjct: 514 LLSSSEDGTIRLWSLQTFTC-LVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDH 572
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ + ++ T P+S AT DR VR+++ G+ + I H
Sbjct: 573 YQPLRIFAGHL----ADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPI 628
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
++++FS + K +AS S D V LW++
Sbjct: 629 HSLAFSPNGKFLASGSTDGRVLLWDI 654
Score = 54 (24.1 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIW 45
+L GH V V F + L + + G +R+W
Sbjct: 494 ILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLW 526
Score = 54 (24.1 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 48 VQHRTVSSSWV-HSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
+ +T S S + H + + V+ P N ++S DGT++ W ++
Sbjct: 484 MDEKTSSESKILHGHSGPVYGVSFSPD--RNYLLSSSEDGTIRLWSLQ 529
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 134 (52.2 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 39/147 (26%), Positives = 63/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 79 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN---T 134
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + + +S P+S I + GWD+ V+++N H
Sbjct: 135 LGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGY 194
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 55 (24.4 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVA 69
L+GH VT + P ++ + + + +W + T + + +H + V
Sbjct: 11 LKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DGT++ WD+ G
Sbjct: 71 IS-SDG-QFALSGSWDGTLRLWDLTTG 95
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 120 (47.3 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 260 HLEPVLCLSIDESCNGGI--SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317
H PV+C+ I S +G + +G AD+ + ++ LD G C + + + P
Sbjct: 589 HKLPVICMDI--SHDGALIATGSADRNVKIWGLDF--GDC--HRSLFAHDDSVMHLRFVP 642
Query: 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT--CNAVSFSSDCKLMASASEDSTVAL 375
S + TAG D +++ ++ K + L+ HH C AVS S D + SAS D ++ L
Sbjct: 643 KSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGD--YVVSASHDKSLRL 700
Query: 376 WE 377
WE
Sbjct: 701 WE 702
Score = 92 (37.4 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 32/153 (20%), Positives = 67/153 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V+ G + G++ ++D+ + + L + H + +S+ G ++GGAD+ + ++ +
Sbjct: 468 VVIGTKTGNMQLYDLASGNL-LETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFEL 526
Query: 293 STGSCVIKKEINLERPGISGTS-------IRPDSKIAATAGWDRRVRIYNYRKGSALAIL 345
T +K +++++ I PD ++ A + D V+I+ L
Sbjct: 527 VTDKNSTQKRLSVKQTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSL 586
Query: 346 KYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H + S D L+A+ S D V +W L
Sbjct: 587 YGHKLPVICMDISHDGALIATGSADRNVKIWGL 619
Score = 84 (34.6 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
GHRA+VT + + Q L +G+ ++ IWD + + H A V+ A
Sbjct: 105 GHRAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDA---VTQALFLR-E 160
Query: 76 LNKVISQGRDGTVKCWDIEN 95
N +++ G+D VK WD++N
Sbjct: 161 RNLLVTSGKDTMVKWWDLDN 180
Score = 60 (26.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH-SAAHGIVSVATGP 72
L+GH+ +VT F + + +L ++ WD + H + G+V V+
Sbjct: 145 LKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEE- 203
Query: 73 SIGLNKVISQGRDGTVKCWDI 93
++I+ D ++ WDI
Sbjct: 204 ----TRLITGAADSELRAWDI 220
Score = 56 (24.8 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 36 GTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
GT G ++++D + + H A + S++ P ++ G D VK WD E
Sbjct: 471 GTKTGNMQLYDLASGNLLETIAAHDGA--LWSMSLSPD--QRGFVTGGADKAVKFWDFE 525
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 22/91 (24%), Positives = 40/91 (43%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
+ + +L+G + VT +C L G G +R++ + + H AA + S+
Sbjct: 56 EKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAA--VTSL 113
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIEN-GGL 98
+G ++ S +D V WD+ N GL
Sbjct: 114 KYD-QLG-GRLASGSKDTDVIIWDVINESGL 142
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 140 (54.3 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 46/178 (25%), Positives = 79/178 (44%)
Query: 207 NFSSKGRGMCMAVQAYLPSKS--QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 264
N ++K + + M YL + S + +L DG+ +WD+ + G L + H V
Sbjct: 141 NMAAKKKSVAMHTN-YLSACSFTNSDMQILTASGDGTCALWDVES-GQLLQSFHGHGADV 198
Query: 265 LCLSI--DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 322
LCL + E+ N +SGG D+K +++ D +G CV + I+ P
Sbjct: 199 LCLDLAPSETGNTFVSGGCDKKAMVW--DMRSGQCV--QAFETHESDINSVRYYPSGDAF 254
Query: 323 ATAGWDRRVRIYNYRKGSALAILKYHHATCNA--VSFSSDCKLMASASEDSTVALWEL 378
A+ D R+Y+ R +AI A V FS +L+ + D T+ +W++
Sbjct: 255 ASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 312
Score = 100 (40.3 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 43/169 (25%), Positives = 70/169 (41%)
Query: 209 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLS 268
S G G + PS++ G V G D +VWD+R+ G + A + H + +
Sbjct: 190 SFHGHGADVLCLDLAPSET-GNTFVSGGC-DKKAMVWDMRS-GQCVQAFETHESDINSVR 246
Query: 269 IDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW- 327
S + SG D LY+L + KE + G S ++ AG+
Sbjct: 247 YYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF--GASSVDFSLSGRLLF-AGYN 303
Query: 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
D + +++ KGS ++IL H + + S D S S D T+ +W
Sbjct: 304 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
Score = 52 (23.4 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 78 KVISQGRDGTVKCWDIENGGL 98
++++ DGT WD+E+G L
Sbjct: 167 QILTASGDGTCALWDVESGQL 187
Score = 50 (22.7 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV----QHR-TVSSSWVHSAAH 63
L+GH V + + + K L + + G++ +WD+ +H T+ +WV + A+
Sbjct: 59 LKGHGNKVLCMDWCKDKRRLVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 113
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 78 KVISQGRDGTVKCWD 92
+++S +DG V WD
Sbjct: 77 RLVSSSQDGKVIVWD 91
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 142 (55.0 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 48/192 (25%), Positives = 84/192 (43%)
Query: 193 RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK--SQGFVNVLAGYEDGSILVWDIRNP 250
+C+ ++ S + N ++K + + M YL + + + +L DG+ +WD+ +
Sbjct: 130 KCS-VYPLSLDKNENLAAKKKSVAMHTN-YLSACCFTNSDMQILTSSGDGTCALWDVES- 186
Query: 251 GIPLTAMKVHLEPVLCLSI--DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 308
G L + H VLCL + E+ N +SGG D+K ++ D TG CV +
Sbjct: 187 GQMLQSFHGHAADVLCLDLAPSETGNTFVSGGCDKKACVW--DMRTGQCV--QSFESHDS 242
Query: 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA--VSFSSDCKLMAS 366
I+ P A+ D R+Y+ R +AI A V FS +L+
Sbjct: 243 DINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFG 302
Query: 367 ASEDSTVALWEL 378
D T+ +W++
Sbjct: 303 GYNDYTINVWDV 314
Score = 47 (21.6 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV----QHR-TVSSSWVHSAAH 63
L+GH V + + + K + + + G++ +WD +H T+ +WV + A+
Sbjct: 61 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDAFTTNKEHAVTMPCTWVMACAY 115
Score = 41 (19.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 78 KVISQGRDGTVKCWD 92
+++S +DG V WD
Sbjct: 79 RIVSSSQDGKVIVWD 93
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 119 (46.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 40/155 (25%), Positives = 64/155 (41%)
Query: 225 SKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQK 284
S Q FV +D +I VW L ++ H+ V C +S D+
Sbjct: 144 SDGQSFVTAS---DDKTIKVWSTHRQKF-LFSLSQHINWVRCAKFSPDGRLIVSASDDKT 199
Query: 285 IVLYNLDHSTGSCVIKKEINLERPG-ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA 343
+ L+ D ++ CV E G ++ P A AG D V++++ R L
Sbjct: 200 VKLW--DKTSRECV---HSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQ 254
Query: 344 ILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ H A NA+SF + +AS DST+ + +L
Sbjct: 255 HYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 289
Score = 73 (30.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 34/115 (29%), Positives = 45/115 (39%)
Query: 6 PPPDPVAV--LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH 63
P DP +GHR +VT V F L +G+ L +W H S H
Sbjct: 36 PQEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVW----HMKPQSRAYRFTGH 91
Query: 64 --GIVSVATGPSIGLNKVISQGRDGTVKCWDIEN--GGLSSNPSLTIKTNSYHFC 114
+ V PS L + S RD TV+ W + N G + + T S HFC
Sbjct: 92 KDAVTCVNFSPSGHL--LASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFC 143
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 108 (43.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 35/155 (22%), Positives = 68/155 (43%)
Query: 228 QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVL 287
QG V G DG+I +WD+RN +K H + + L+I + + +S D + +
Sbjct: 188 QG-TQVFIGGIDGAIKIWDLRNNHCS-HVLKGHKDIITSLAISKDGSSLLSNSMDNTVRI 245
Query: 288 YNLDHSTGSC----VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA 343
+++ + + + I+ + + G + +S+ D+ V +++ G
Sbjct: 246 FDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYVWS-ATGDLRY 304
Query: 344 ILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+L H + N V F ++ S S D T+ L EL
Sbjct: 305 VLPGHEGSVNHVDFHPHQDIILSCSSDRTIFLGEL 339
Score = 84 (34.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 19/80 (23%), Positives = 37/80 (46%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VL G + ++TD+ + + +++ ++ L WD V + + H G+V+
Sbjct: 88 VLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRK---HKGHAGVVNALDVL 144
Query: 73 SIGLNKVISQGRDGTVKCWD 92
+G + S D T+K WD
Sbjct: 145 KVGSELLTSVSDDCTMKVWD 164
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/146 (29%), Positives = 76/146 (52%)
Query: 233 VLA-GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291
VLA G +D ++ +WD + T ++ H VL ++ SG D+ + L+ D
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQT-LEGHSGWVLSVAFSPDGRLLASGSFDKTVRLW--D 765
Query: 292 HSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
+TGS +++ + + + PD ++ A+ +D+ VR+++ GS L+ H T
Sbjct: 766 PATGS--LQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDT 823
Query: 352 CNAVSFSSDCKLMASASEDSTVALWE 377
+V+FS D +L+AS S D TV LW+
Sbjct: 824 VRSVAFSPDGRLLASGSFDKTVRLWD 849
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 131 (51.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 46/192 (23%), Positives = 82/192 (42%)
Query: 201 SCGGSPNFSS----KGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL---------VWDI 247
+CGG N S K R + V LP G+++ +D I+ +WDI
Sbjct: 113 ACGGLDNMCSIYNLKTREGNVRVSRELPGHG-GYLSCCRFLDDNQIVTSSGDMSCGLWDI 171
Query: 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 307
G+ +T+ H V+ LS+ C +SG D L+++ G C K+
Sbjct: 172 ET-GLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIRE--GVC--KQTFPGHE 226
Query: 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN--AVSFSSDCKLMA 365
I+ + P+ + AT D R+++ R LA+ + + C +V+FS +L+
Sbjct: 227 SDINAVTFFPNGQAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLL 286
Query: 366 SASEDSTVALWE 377
+ +D +W+
Sbjct: 287 AGYDDFNCNVWD 298
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 32/147 (21%), Positives = 65/147 (44%)
Query: 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291
N+++ +DG ++VWD + A+ + V+ + S + GG D +YNL
Sbjct: 69 NLVSASQDGKLIVWDSHTTN-KVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLK 127
Query: 292 HSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G+ + +E+ +S D++I ++G D +++ G + H
Sbjct: 128 TREGNVRVSRELPGHGGYLSCCRFLDDNQIVTSSG-DMSCGLWDIETGLQVTSFLGHTGD 186
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
A+S + CK S + D++ LW++
Sbjct: 187 VMALSLAPQCKTFVSGACDASAKLWDI 213
Score = 58 (25.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDT-----VQHRTVSSSWVHSAAHGIVS- 67
LRGH A + + + L + + G+L +WD+ V + SSWV + A+
Sbjct: 51 LRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 110
Query: 68 -VATGPSIGLNKVIS----QGRDGTVK 89
VA G GL+ + S + R+G V+
Sbjct: 111 YVACG---GLDNMCSIYNLKTREGNVR 134
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 156 (60.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 41/141 (29%), Positives = 70/141 (49%)
Query: 238 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC 297
+D ++ +WD + T ++ H + V + S D + ++ D TGS
Sbjct: 399 DDSTVKIWDTGTGSLQHT-LEGHRDWVRSVIFSHDSQLLASASDDSTVKIW--DTGTGS- 454
Query: 298 VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSF 357
++ + R + DS++ A+A DR VRI++ KGS L+ H + +VSF
Sbjct: 455 -LQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSF 513
Query: 358 SSDCKLMASASEDSTVALWEL 378
S D +L+ASAS D TV +W++
Sbjct: 514 SHDSRLLASASNDQTVRIWDI 534
Score = 134 (52.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 39/145 (26%), Positives = 68/145 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+LA D ++ +WD + T ++ H + V + S D + ++ D
Sbjct: 352 LLASASDSTVKIWDTGTGSLQHT-LEGHRDWVRSVIFSHDSQLLASASDDSTVKIW--DT 408
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
TGS ++ + R + DS++ A+A D V+I++ GS L+ H
Sbjct: 409 GTGS--LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWV 466
Query: 353 NAVSFSSDCKLMASASEDSTVALWE 377
+V FS D +L+ASAS+D TV +W+
Sbjct: 467 RSVIFSHDSRLLASASDDRTVRIWD 491
Score = 132 (51.5 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 37/140 (26%), Positives = 69/140 (49%)
Query: 238 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC 297
+D ++ +WD + T ++ H + V + ++ +D + ++ D TGS
Sbjct: 316 DDRTVKIWDTETGSLQHT-LEGHSDLVRSVIFSHDSRL-LASASDSTVKIW--DTGTGS- 370
Query: 298 VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSF 357
++ + R + DS++ A+A D V+I++ GS L+ H +V F
Sbjct: 371 -LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF 429
Query: 358 SSDCKLMASASEDSTVALWE 377
S D +L+ASAS+DSTV +W+
Sbjct: 430 SHDSQLLASASDDSTVKIWD 449
Score = 38 (18.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 6 PPPDPVAVLR 15
P PDP+A +R
Sbjct: 139 PEPDPLATIR 148
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 98 (39.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/152 (25%), Positives = 71/152 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D I VWD+R + T M+ H + V LS+ + +S D + ++++
Sbjct: 235 IISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRP 293
Query: 293 STGS--CV--IKKEI-NLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYRKGSALAILK 346
CV + + N E+ + S PD SKIA + DR V +++ L L
Sbjct: 294 FAPKERCVKIFQGNVHNFEK-NLLRCSWSPDGSKIAGGSA-DRFVYVWDTTSRRILYKLP 351
Query: 347 YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H + N ++F + ++ SAS D + + E+
Sbjct: 352 GHAGSVNELAFHPEEPIILSASSDKRLYMGEI 383
Score = 96 (38.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 127 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 186
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDI 93
GP + V + DGTVK WDI
Sbjct: 187 ARRGPQL----VCTGSDDGTVKLWDI 208
Score = 72 (30.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 19/88 (21%), Positives = 47/88 (53%)
Query: 14 LRGHRASVTDVCFHQTK-P-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
L+GH + V C+ + P ++ G+ G +++WD ++ + ++ ++ + +++V
Sbjct: 174 LKGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWD-IRKKAAVQTFQNT--YQVLAVTFN 229
Query: 72 PSIGLNKVISQGRDGTVKCWDIENGGLS 99
+ +++IS G D +K WD+ L+
Sbjct: 230 DTS--DQIISGGIDNDIKVWDLRQNKLT 255
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 137 (53.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/103 (30%), Positives = 51/103 (49%)
Query: 277 ISGGADQKIVLYNL--DHSTGSC-VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 333
+S D+K++++N+ D +G KK + I+ SI D A + WD VR+
Sbjct: 39 VSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRL 98
Query: 334 YNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
++ G + H + +VSFS D + + SAS D T+ LW
Sbjct: 99 WDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLW 141
Score = 111 (44.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 39/151 (25%), Positives = 74/151 (49%)
Query: 233 VLAGYEDGSILVWD-IRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYN 289
+++ D +I +W+ + +T + H + + C+ S N I S G D+ + ++N
Sbjct: 129 IVSASRDKTIKLWNTLAQCKYTITDQQ-HTDWITCVRFSPSPNQAIIVSCGWDKLVKVWN 187
Query: 290 LDHSTGSCVIKKEINLE-RPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY 347
L + C + K NLE G+ T +I PD + A+ G D ++++ ++G L L+
Sbjct: 188 LKN----CDLNK--NLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLET 241
Query: 348 HHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+T N++ FS C A+ D + +W L
Sbjct: 242 G-STINSLCFSP-CDYWLCAATDRFIRIWNL 270
Score = 50 (22.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 46 DTVQHRTVSSSWVHSAAHG--IVSVATGPSIGLNKVISQGRDGTVKCWDI 93
D ++ +S V H + SV+T L ++S RD + W+I
Sbjct: 3 DNIKEAEISLRGVLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNI 52
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 137 (53.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/103 (30%), Positives = 51/103 (49%)
Query: 277 ISGGADQKIVLYNL--DHSTGSC-VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 333
+S D+K++++N+ D +G KK + I+ SI D A + WD VR+
Sbjct: 39 VSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRL 98
Query: 334 YNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
++ G + H + +VSFS D + + SAS D T+ LW
Sbjct: 99 WDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLW 141
Score = 111 (44.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 39/151 (25%), Positives = 74/151 (49%)
Query: 233 VLAGYEDGSILVWD-IRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYN 289
+++ D +I +W+ + +T + H + + C+ S N I S G D+ + ++N
Sbjct: 129 IVSASRDKTIKLWNTLAQCKYTITDQQ-HTDWITCVRFSPSPNQAIIVSCGWDKLVKVWN 187
Query: 290 LDHSTGSCVIKKEINLE-RPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY 347
L + C + K NLE G+ T +I PD + A+ G D ++++ ++G L L+
Sbjct: 188 LKN----CDLNK--NLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLET 241
Query: 348 HHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+T N++ FS C A+ D + +W L
Sbjct: 242 G-STINSLCFSP-CDYWLCAATDRFIRIWNL 270
Score = 50 (22.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 46 DTVQHRTVSSSWVHSAAHG--IVSVATGPSIGLNKVISQGRDGTVKCWDI 93
D ++ +S V H + SV+T L ++S RD + W+I
Sbjct: 3 DNIKEAEISLRGVLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNI 52
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 121 (47.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 38/122 (31%), Positives = 60/122 (49%)
Query: 260 HLEPVLCLSIDESCNGGI--SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317
H PVLC+ I S +G + +G AD+ + ++ LD G C + + + P
Sbjct: 589 HKLPVLCMDI--SHDGALIATGSADRNVKIWGLDF--GDC--HRSLFAHDDSVMYLRFVP 642
Query: 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT--CNAVSFSSDCKLMASASEDSTVAL 375
S + TAG D +++ ++ K + L+ HH C AVS S D + SAS D ++ L
Sbjct: 643 KSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGD--YVVSASHDKSLRL 700
Query: 376 WE 377
WE
Sbjct: 701 WE 702
Score = 96 (38.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 32/153 (20%), Positives = 68/153 (44%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V+ G + G++ ++D+ + G L + H + +S+ G ++GGAD+ + ++ +
Sbjct: 468 VVIGTKTGNLQLYDLAS-GTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFEL 526
Query: 293 STGSCVIKKEINLERP-------GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL 345
T +K +++++ + S P+ K+ A + D V+++ L
Sbjct: 527 VTDKNSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSL 586
Query: 346 KYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H + S D L+A+ S D V +W L
Sbjct: 587 YGHKLPVLCMDISHDGALIATGSADRNVKIWGL 619
Score = 81 (33.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
GH+A+VT + + Q L +G+ ++ IWD + + H A V+ A
Sbjct: 105 GHKAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDA---VTQALFLR-E 160
Query: 76 LNKVISQGRDGTVKCWDIEN 95
N +++ G+D VK WD++N
Sbjct: 161 RNLLVTSGKDTMVKWWDLDN 180
Score = 62 (26.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/82 (21%), Positives = 36/82 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH-SAAHGIVSVATGP 72
L+GH+ +VT F + + +L ++ WD + H + G+V V+
Sbjct: 145 LKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEE- 203
Query: 73 SIGLNKVISQGRDGTVKCWDIE 94
++I+ D ++ WDI+
Sbjct: 204 ----KRLITGAADSELRAWDID 221
Score = 56 (24.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 23/91 (25%), Positives = 41/91 (45%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
+ + +L+G++ VT +C L G G +RI+ + + H AA + S+
Sbjct: 56 EKILILQGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHKAA--VTSL 113
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIEN-GGL 98
+G ++ S +D V WD+ N GL
Sbjct: 114 KYD-QLG-GRLASGSKDTDVIIWDVINESGL 142
Score = 43 (20.2 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 13/36 (36%), Positives = 14/36 (38%)
Query: 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQN 200
V G K VA V IWDL E+ L N
Sbjct: 29 VTLRGEKGRYVAVPACEHVFIWDLRKGEKILILQGN 64
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 140 (54.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 46/178 (25%), Positives = 79/178 (44%)
Query: 207 NFSSKGRGMCMAVQAYLPSKS--QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 264
N ++K + + M YL + S + +L DG+ +WD+ + G L + H V
Sbjct: 141 NMAAKKKSVAMHTN-YLSACSFTNSDMQILTASGDGTCALWDVES-GQLLQSFHGHGADV 198
Query: 265 LCLSI--DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 322
LCL + E+ N +SGG D+K +++ D +G CV + I+ P
Sbjct: 199 LCLDLAPSETGNTFVSGGCDKKAMVW--DMRSGQCV--QAFETHESDINSVRYYPSGDAF 254
Query: 323 ATAGWDRRVRIYNYRKGSALAILKYHHATCNA--VSFSSDCKLMASASEDSTVALWEL 378
A+ D R+Y+ R +AI A V FS +L+ + D T+ +W++
Sbjct: 255 ASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 312
Score = 97 (39.2 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 42/169 (24%), Positives = 70/169 (41%)
Query: 209 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLS 268
S G G + PS++ G V G D +VWD+R+ G + A + H + +
Sbjct: 190 SFHGHGADVLCLDLAPSET-GNTFVSGGC-DKKAMVWDMRS-GQCVQAFETHESDINSVR 246
Query: 269 IDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW- 327
S + SG D LY+L + KE + G S ++ AG+
Sbjct: 247 YYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF--GASSVDFSLSGRLLF-AGYN 303
Query: 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
D + +++ KG+ ++IL H + + S D S S D T+ +W
Sbjct: 304 DYTINVWDVLKGARVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 78 KVISQGRDGTVKCWDIENGGL 98
++++ DGT WD+E+G L
Sbjct: 167 QILTASGDGTCALWDVESGQL 187
Score = 48 (22.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV----QHR-TVSSSWVHSAAH 63
L+GH V + + + K + + + G++ +WD+ +H T+ +WV + A+
Sbjct: 59 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 113
Score = 41 (19.5 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 78 KVISQGRDGTVKCWD 92
+++S +DG V WD
Sbjct: 77 RIVSSSQDGKVIVWD 91
>UNIPROTKB|F1NDZ6 [details] [associations]
symbol:FBXW8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0060712 "spongiotrophoblast layer development" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 SUPFAM:SSF81383 GO:GO:0019005
OMA:NIFQYLD GeneTree:ENSGT00390000017221 EMBL:AADN02050454
IPI:IPI00601523 Ensembl:ENSGALT00000013364 Uniprot:F1NDZ6
Length = 580
Score = 116 (45.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 37/127 (29%), Positives = 62/127 (48%)
Query: 259 VHLEPVLCLSID-ESCNGGISG-----GADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312
V+ +PV CL + G+ G +++LYNL+ T C+ K++ +
Sbjct: 362 VYGQPVTCLDVSAHEAAFGVKGFGWMLNEPNQVLLYNLE--TSQCL--KKLGNSMGDFTC 417
Query: 313 TSIRPDS--KIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED 370
+++ DS + T DRRVR+Y+ R+ +AL L H +AV D K++ S ED
Sbjct: 418 VNLQ-DSPPNMLVTGNKDRRVRVYDLRRSTALCSLYAHRLGVSAVQMD-DWKIV-SGGED 474
Query: 371 STVALWE 377
V +W+
Sbjct: 475 GLVCVWD 481
Score = 81 (33.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 27 HQTKPILFAGTTGGELRIWDTVQHRTVS-SSWVHSAAHGIVSVATGPSIGLNKV-----I 80
H ++ AG T GE+R+WDT RT ++ + AHG P + ++ +
Sbjct: 196 HSCDGVVIAGYTSGEVRLWDT---RTWDYTAPILEPAHGPGDAGPQPHVSFVRINSSLAV 252
Query: 81 SQGRDGTVKCWDIENG 96
+ DGTV W + G
Sbjct: 253 AAYEDGTVSVWSLMIG 268
Score = 51 (23.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 233 VLAGYEDGSILVWDIR 248
V+AGY G + +WD R
Sbjct: 202 VIAGYTSGEVRLWDTR 217
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 107 (42.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 34/148 (22%), Positives = 62/148 (41%)
Query: 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291
+++ +D ++ VW L ++ H+ V C +S D+ + L+ D
Sbjct: 117 SLVTASDDKTVKVWSTHRQKF-LFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLW--D 173
Query: 292 HSTGSCVIKKEINLERPG-ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
++ CV E G ++ P A A D V++++ R L + H A
Sbjct: 174 KTSRECV---HSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSA 230
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+SF + +AS DST+ + +L
Sbjct: 231 AVNALSFHPSGNYLLTASSDSTLKILDL 258
Score = 86 (35.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 36/116 (31%), Positives = 47/116 (40%)
Query: 5 PPPPDPVAV--LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA 62
P P DP +GHR ++T V F L +G+ L +W H S A
Sbjct: 4 PCPEDPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVW----HMKPQSRAYRFAG 59
Query: 63 H--GIVSVATGPSIGLNKVISQGRDGTVKCWDIEN--GGLSSNPSLTIKTNSYHFC 114
H + V PS L + S RD TV+ W I N G + + T S HFC
Sbjct: 60 HKDAVTCVNFSPSGHL--LASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFC 112
Score = 80 (33.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 305 LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM 364
L ++ S P TA D ++I + +G L L H V+FS +
Sbjct: 227 LHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 286
Query: 365 ASASEDSTVALWE 377
AS D V +W+
Sbjct: 287 ASGGSDEQVMVWK 299
Score = 56 (24.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/76 (28%), Positives = 32/76 (42%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
GH+ +VT V F + +L +G+ +RIW S V A V S G
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWIP---NVKGESTVFRAHTATVRSVHFCSDG 115
Query: 76 LNKVISQGRDGTVKCW 91
+++ D TVK W
Sbjct: 116 -QSLVTASDDKTVKVW 130
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 124 (48.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 260 HLEPVLCLSIDESCNGGI--SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317
H PV+C+ I S +G + +G AD+ + ++ LD G C K + + P
Sbjct: 590 HKLPVICMDI--SYDGALIATGSADRNVKIWGLDF--GDC--HKSLFAHDDSVMYLKFVP 643
Query: 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT--CNAVSFSSDCKLMASASEDSTVAL 375
S + TAG DR+++ ++ K + L+ HH C A+S S D + S+S D ++ L
Sbjct: 644 KSHLFFTAGKDRKIKQWDADKFEHVQTLEGHHQEIWCLAISPSGD--YVVSSSHDKSLRL 701
Query: 376 WE 377
WE
Sbjct: 702 WE 703
Score = 91 (37.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 35/154 (22%), Positives = 68/154 (44%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD- 291
V+ G + G + ++D+ + + L + H + LS+ G ++GGAD+ + ++ +
Sbjct: 469 VVIGTKTGKLQLYDLASGNL-LETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFEL 527
Query: 292 ----HSTGSCVIKKE---INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAI 344
+ST + K+ + L+ + S P+ K+ A + D V+I+
Sbjct: 528 VKDENSTQKRLSVKQTRTLQLDEEVLC-VSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLS 586
Query: 345 LKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
L H + S D L+A+ S D V +W L
Sbjct: 587 LYGHKLPVICMDISYDGALIATGSADRNVKIWGL 620
Score = 77 (32.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
GH+A+VT + + Q L +G+ ++ +WD + + H A ++ A
Sbjct: 105 GHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDA---ITQALFLR-E 160
Query: 76 LNKVISQGRDGTVKCWDIE 94
N ++S G+D VK WD++
Sbjct: 161 KNLLVSSGKDTMVKWWDLD 179
Score = 65 (27.9 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 21/83 (25%), Positives = 39/83 (46%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDT-VQH--RTVSSSWVHSAAHGIVSVAT 70
L+GH+ ++T F + K +L + ++ WD QH +TV + G+V V+
Sbjct: 145 LKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGH--RTEVWGLVLVSE 202
Query: 71 GPSIGLNKVISQGRDGTVKCWDI 93
++I+ D ++ WDI
Sbjct: 203 E-----KRLITGASDSELRAWDI 220
Score = 51 (23.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 22/91 (24%), Positives = 40/91 (43%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
+ + +L+G + VT +C L G G +RI+ + + H AA + S+
Sbjct: 56 EKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAA--VTSL 113
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIEN-GGL 98
+G ++ S +D + WD+ N GL
Sbjct: 114 KYD-QLG-GRLASGSKDTDIIVWDVINESGL 142
Score = 41 (19.5 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL----HQNSC 202
V G K VA V IWDL E+ L H+ +C
Sbjct: 29 VTLRGEKGRYVAVPACEHVFIWDLRKGEKILILQGLKHEVTC 70
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 54/215 (25%), Positives = 96/215 (44%)
Query: 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQA-YLPSKSQG 229
KY+A + +I+D+NT E+ L ++ + + R +C + YL +
Sbjct: 312 KYVATGCNR--SAQIFDVNTGEKVCVLQDDNADTTGDLYI--RSVCFSPDGKYLAT---- 363
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
G ED I VWDI I + H + + L SG D+ + L++
Sbjct: 364 ------GAEDKQIRVWDITTRTIRIQ-FAGHEQDIYSLDFARDGRTIASGSGDRTVRLWD 416
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY-- 347
+++ T V E G++ +I PD+K A D+ VR+++ +G + L+
Sbjct: 417 IENGTALTVFTIE-----DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPD 471
Query: 348 -HHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381
H + +V+FS + + + + S D T+ LWEL P
Sbjct: 472 GHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATP 506
Score = 119 (46.9 bits), Expect = 0.00053, P = 0.00053
Identities = 36/143 (25%), Positives = 67/143 (46%)
Query: 245 WDIRNPGIP--LTAMKVHL---EPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCV 298
W I N +P L VH E V+C + S +G ++ G ++ +++++ CV
Sbjct: 277 WAIFNQAVPRVLDVDLVHTLQHESVVCC-VRFSADGKYVATGCNRSAQIFDVNTGEKVCV 335
Query: 299 IKKEINLERPG---ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAV 355
++ + N + G I PD K AT D+++R+++ + H ++
Sbjct: 336 LQDD-NADTTGDLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSL 394
Query: 356 SFSSDCKLMASASEDSTVALWEL 378
F+ D + +AS S D TV LW++
Sbjct: 395 DFARDGRTIASGSGDRTVRLWDI 417
Score = 99 (39.9 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 38/157 (24%), Positives = 68/157 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKV---HLEPVLCLSIDESCNGGISGGADQKIVLYN 289
V AG D S+ VWD+ G P+ ++ H + V ++ + ++G D+ I L+
Sbjct: 444 VAAGSLDKSVRVWDLTQ-GCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWE 502
Query: 290 LDHSTGS----------CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG 339
L G+ CV K R + ++ PD++ + DR V+ ++ R G
Sbjct: 503 LATPRGNMQNQGSKGGRCV--KTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTG 560
Query: 340 SALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
S +L+ H + +V+ S A+ S D +W
Sbjct: 561 STQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 82 (33.9 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 21 VTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH--GIVSVATGPSIGLNK 78
+ VCF L G ++R+WD + RT+ + A H I S+ +
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWD-ITTRTIR---IQFAGHEQDIYSLDFARD---GR 401
Query: 79 VISQGR-DGTVKCWDIENG 96
I+ G D TV+ WDIENG
Sbjct: 402 TIASGSGDRTVRLWDIENG 420
Score = 75 (31.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 20/82 (24%), Positives = 40/82 (48%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
GH + + F + + +G+ +R+WD +++ T + V + G+ +VA P
Sbjct: 386 GHEQDIYSLDFARDGRTIASGSGDRTVRLWD-IENGTALT--VFTIEDGVTTVAISPD-- 440
Query: 76 LNKVISQGR-DGTVKCWDIENG 96
K ++ G D +V+ WD+ G
Sbjct: 441 -TKYVAAGSLDKSVRVWDLTQG 461
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 140 (54.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 37/139 (26%), Positives = 62/139 (44%)
Query: 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVI 299
G + +W + L ++ H PV C S +G + A + +S+ C
Sbjct: 44 GKLYLWKTSTAKL-LASVSGHTGPVKCCVF--SSDGRLFASASHDCSVRTWCNSSLKCT- 99
Query: 300 KKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS 359
+ R + S PD + + GWD R I++ + G+ L LK H+A + FSS
Sbjct: 100 -HTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSGALLEELKGHNAAVQSSVFSS 158
Query: 360 DCKLMASASEDSTVALWEL 378
D + +A+ S D V +W+L
Sbjct: 159 DSQSVATGSWDRAVRVWKL 177
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 146 (56.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 60/218 (27%), Positives = 93/218 (42%)
Query: 167 AEGPKY--MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP 224
A PKY M ++ + + +W L TR N G P S KG ++ +
Sbjct: 22 ATTPKYPDMILSASRDKSIIMWKL------TRDETNY--GIPQRSLKGHSHFVS-DVVIS 72
Query: 225 SKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQK 284
S Q F L+G DG++ +WD+ G+ H + VL ++ +SG D+
Sbjct: 73 SDGQ-FA--LSGAWDGTLRLWDLTT-GLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKT 128
Query: 285 IVLYNLDHSTGSC--VIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGS 340
I L+N + G C I+ E + E +S P+S I + GWD+ V+++N
Sbjct: 129 IKLWN---TLGVCKYTIQDEGHTE--WVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCK 183
Query: 341 ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H N V+ S D L AS +D LW+L
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 92 (37.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNL 179
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 180 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGD 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+ FS + + +A+ S + +W+L
Sbjct: 235 VI-NALCFSPNRYWLCAATGPS-IKIWDL 261
Score = 91 (37.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 25/83 (30%), Positives = 37/83 (44%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P L+GH V+DV +G G LR+WD T H+ ++SVA
Sbjct: 55 PQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTK--DVLSVA 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 113 F--SADNRQIVSGSRDKTIKLWN 133
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 139 (54.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 207 NFSSKGRGMCMAVQAYLPSKS--QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 264
N ++K + + M YL + S + +L DG+ +WD+ + G L + H V
Sbjct: 141 NMAAKKKSVAMHTN-YLSACSFTNSDMQILTASGDGTCALWDVES-GQLLQSFHGHGADV 198
Query: 265 LCLSI--DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 322
LCL + E+ N +SGG D+K +++ D +G CV + ++ P
Sbjct: 199 LCLDLAPSETGNTFVSGGCDKKAMVW--DMRSGQCV--QAFETHESDVNSVRYYPSGDAF 254
Query: 323 ATAGWDRRVRIYNYRKGSALAILKYHHATCNA--VSFSSDCKLMASASEDSTVALWEL 378
A+ D R+Y+ R +AI A V FS +L+ + D T+ +W++
Sbjct: 255 ASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 312
Score = 101 (40.6 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 44/169 (26%), Positives = 70/169 (41%)
Query: 209 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLS 268
S G G + PS++ G V G D +VWD+R+ G + A + H V +
Sbjct: 190 SFHGHGADVLCLDLAPSET-GNTFVSGGC-DKKAMVWDMRS-GQCVQAFETHESDVNSVR 246
Query: 269 IDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW- 327
S + SG D LY+L + KE + G S ++ AG+
Sbjct: 247 YYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF--GASSVDFSLSGRLLF-AGYN 303
Query: 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
D + +++ KGS ++IL H + + S D S S D T+ +W
Sbjct: 304 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
Score = 52 (23.4 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 78 KVISQGRDGTVKCWDIENGGL 98
++++ DGT WD+E+G L
Sbjct: 167 QILTASGDGTCALWDVESGQL 187
Score = 48 (22.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV----QHR-TVSSSWVHSAAH 63
L+GH V + + + K + + + G++ +WD+ +H T+ +WV + A+
Sbjct: 59 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 113
Score = 41 (19.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 78 KVISQGRDGTVKCWD 92
+++S +DG V WD
Sbjct: 77 RIVSSSQDGKVIVWD 91
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 106 (42.4 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 29/117 (24%), Positives = 53/117 (45%)
Query: 260 HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319
H PV+CL I + I+G AD+ I ++ LD+ G C K I S P +
Sbjct: 572 HKLPVMCLDISDDSTLIITGSADKNIKIWGLDY--GDC--HKSFFAHDDSIMQVSFIPST 627
Query: 320 KIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
+A D+R++ ++ K + ++ HH +++ S S S D ++ ++
Sbjct: 628 HHFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIF 684
Score = 99 (39.9 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
AV GHR SVT + F++ IL +G+ E+ +WD + + H I SV
Sbjct: 95 AVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQ--ITSVKLL 152
Query: 72 PSIGLNKVISQGRDGTVKCWDIE 94
N +I+ +DG +K WD E
Sbjct: 153 ERS--NHLITSSKDGFIKIWDTE 173
Score = 96 (38.9 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 35/160 (21%), Positives = 68/160 (42%)
Query: 229 GFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 288
G ++V+ G + G+I V+++ + + ++K H V L + G SGGAD+ + +
Sbjct: 446 GNLHVIVGTKTGTIEVFELASAA-RVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFW 504
Query: 289 NLD---------HSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG 339
+ + H + + K + +E + D+K A + D V+I+ Y
Sbjct: 505 DFELIASQENSKHKVLNLSLTKTLKVESD-VLALKYSADNKFLAVSLLDNTVKIF-YTDT 562
Query: 340 SALAILKY-HHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ Y H + S D L+ + S D + +W L
Sbjct: 563 VKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGL 602
Score = 91 (37.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLN 77
+A VT+VC + +L +G + G +RIW ++ + V + G V+ T +G N
Sbjct: 59 KAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQA---VFNGHRGSVTTMTFNRLG-N 114
Query: 78 KVISQGRDGTVKCWDI--ENG 96
++S +D V WDI E+G
Sbjct: 115 ILVSGSKDTEVIVWDIITESG 135
Score = 61 (26.5 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 33 LFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92
+ GT G + +++ V+S H + + S+ P L V S G D VK WD
Sbjct: 450 VIVGTKTGTIEVFELASAARVASIKAHEGS--VWSLVLTPD--LRGVTSGGADKLVKFWD 505
Query: 93 IE 94
E
Sbjct: 506 FE 507
Score = 38 (18.4 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 92 DIENGGLSSNPSLTIKTNS 110
DI + LSSN + + T+S
Sbjct: 398 DIRSLSLSSNDQMLVSTSS 416
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 120 (47.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 225 SKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQK 284
++S+ V +G D +I VWDIR I + +M H++ + L + +S D
Sbjct: 200 AQSEAGNEVFSGGIDNAIHVWDIRKKAI-VYSMAGHMDTITSLEVSPDSQTLLSNSFDST 258
Query: 285 IVLYNLDH--STGSCVIKKE---INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG 339
+ +++ T + + + LE+ I + KIAA +G DR V +++++ G
Sbjct: 259 VRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSG-DRSVVVWDFKTG 317
Query: 340 SALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWEL 378
L L H T N V F+ + + ++ SAS D + L EL
Sbjct: 318 KILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLMLGEL 357
Score = 69 (29.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 22/87 (25%), Positives = 37/87 (42%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P+ L GH V V F T + +G+ + +W+T + + + S G + +
Sbjct: 58 PIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNT--YGQCENYGILSGHKGAI-LD 114
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S + S D T+ WDIE+G
Sbjct: 115 LQWSRDSKTIFSASADMTLASWDIESG 141
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 44/148 (29%), Positives = 70/148 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV--LCLSIDESCNGGISGGADQKIVLYNL 290
+L +DG + VW ++ G L + H PV C S D S +D I L+++
Sbjct: 41 LLTASDDGCVYVWGTKS-GRLLWRLAGHRGPVKSCCFSPDGRLIA--SSSSDHSIRLWDV 97
Query: 291 DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
S V+K +R + S PDSK A+ GWD+R ++ + G + +L H
Sbjct: 98 ARSKCLHVLKGH---QR-SVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCD 153
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + FS +A+ S DSTV +W+L
Sbjct: 154 SIQSSDFSPTSDSLATGSWDSTVHIWDL 181
Score = 101 (40.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 36/160 (22%), Positives = 76/160 (47%)
Query: 214 GMCMAVQA--YLPSKSQGFVNVLAGYEDGSILVWDIR--NPGIPLTAMKVHLEPVLCLSI 269
G C ++Q+ + P+ ++ G D ++ +WD+R P + ++ H + CL
Sbjct: 150 GHCDSIQSSDFSPTSD----SLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCY 205
Query: 270 DESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD 328
S +G ++ G+ D+ I ++ +T + + ++ ++ + PD A+AG+
Sbjct: 206 --SASGLLASGSWDKTICVWK--PTTNNLPL--QLKGHTIWVNSLAFSPDELKLASAGYS 259
Query: 329 RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASAS 368
R V++++ G L LK +A F+ D KL+ S +
Sbjct: 260 RTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGA 299
Score = 76 (31.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 18/83 (21%), Positives = 38/83 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GHR V CF ++ + ++ +R+WD + + + H + + +V+ P
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRS--VETVSFSPD 121
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
++ S G D W++++G
Sbjct: 122 S--KQLASGGWDKRAIVWEVQSG 142
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 151 (58.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 40/160 (25%), Positives = 76/160 (47%)
Query: 219 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS 278
V + + KS G + + G ED + +W + P + ++ H V C+ + S ++
Sbjct: 23 VSSLVLGKSSGRL-LATGGEDCRVNIWAVSKPNC-IMSLTGHTSAVGCIQFNSSEERVVA 80
Query: 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338
G + L++L+ + I + + + IS P + A+ D +++++ R+
Sbjct: 81 GSLSGSLRLWDLE----AAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRR 136
Query: 339 GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ K H ++FS D K +ASAS+DSTV LW+L
Sbjct: 137 KGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDL 176
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/146 (28%), Positives = 65/146 (44%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V+AG GS+ +WD+ I T M H + L SG D I L+++
Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRTLMG-HKASISSLDFHPMGEYLASGSVDSNIKLWDVRR 136
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
CV + + + + + + PD K A+A D V++++ G + H +
Sbjct: 137 K--GCVFRYKGHTQ--AVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAV 192
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
N V F + L+AS S D TV LW+L
Sbjct: 193 NVVQFHPNEYLLASGSADRTVKLWDL 218
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 44/181 (24%), Positives = 76/181 (41%)
Query: 199 QNSCGGSPNFSSKGRGMCMAVQA--YLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 256
Q+S P+ RG A+ + + +K Q + +G D + +W ++ P +
Sbjct: 3 QHSVEEDPSLERHFRGHRDAITSVDFSLNKKQ----LASGSMDSCLKIWSMK-PQMRAYC 57
Query: 257 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 316
+ H + V+C+ S + SG D+ + L+ S V K R
Sbjct: 58 LVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVR----SVHFS 113
Query: 317 PDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
D + TA D+ ++++ + L L H FS D +L+ASAS+D TV LW
Sbjct: 114 SDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLW 173
Query: 377 E 377
+
Sbjct: 174 D 174
Score = 111 (44.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNL 290
+++ +D +I VW + L ++ H+ V C S +G I+ +D K V
Sbjct: 118 SLVTASDDKTIKVWTVHRQKF-LFSLSQHINWVRCARF--SPDGRLIASASDDKTVKL-W 173
Query: 291 DHSTGSCVIKKEINLERPGISG-TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D ++ C+ E G + P A AG D+ V++++ R L + H
Sbjct: 174 DKTSRECI---HSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHT 230
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
A N++SF + +AS DST+ + +L
Sbjct: 231 AAVNSLSFHPSGNYLITASNDSTLKILDL 259
Score = 77 (32.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 32/100 (32%), Positives = 41/100 (41%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI 74
RGHR ++T V F K L +G+ L+IW H A ++ V PS
Sbjct: 17 RGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDA--VMCVQFSPSG 74
Query: 75 GLNKVISQGRDGTVKCWDIENGGLSSN-PSLTIKTNSYHF 113
L V S RD TV W G S+ + T S HF
Sbjct: 75 HL--VASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHF 112
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 140 (54.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 46/178 (25%), Positives = 79/178 (44%)
Query: 207 NFSSKGRGMCMAVQAYLPSKS--QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 264
N ++K + + M YL + S + +L DG+ +WD+ + G L + H V
Sbjct: 183 NMAAKKKSVAMHTN-YLSACSFTNSDMQILTASGDGTCALWDVES-GQLLQSFHGHGADV 240
Query: 265 LCLSI--DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 322
LCL + E+ N +SGG D+K +++ D +G CV + I+ P
Sbjct: 241 LCLDLAPSETGNTFVSGGCDKKAMVW--DMRSGQCV--QAFETHESDINSVRYYPSGDAF 296
Query: 323 ATAGWDRRVRIYNYRKGSALAILKYHHATCNA--VSFSSDCKLMASASEDSTVALWEL 378
A+ D R+Y+ R +AI A V FS +L+ + D T+ +W++
Sbjct: 297 ASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 354
Score = 100 (40.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 43/169 (25%), Positives = 70/169 (41%)
Query: 209 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLS 268
S G G + PS++ G V G D +VWD+R+ G + A + H + +
Sbjct: 232 SFHGHGADVLCLDLAPSET-GNTFVSGGC-DKKAMVWDMRS-GQCVQAFETHESDINSVR 288
Query: 269 IDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW- 327
S + SG D LY+L + KE + G S ++ AG+
Sbjct: 289 YYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF--GASSVDFSLSGRLLF-AGYN 345
Query: 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
D + +++ KGS ++IL H + + S D S S D T+ +W
Sbjct: 346 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 394
Score = 52 (23.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 78 KVISQGRDGTVKCWDIENGGL 98
++++ DGT WD+E+G L
Sbjct: 209 QILTASGDGTCALWDVESGQL 229
Score = 48 (22.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV----QHR-TVSSSWVHSAAH 63
L+GH V + + + K + + + G++ +WD+ +H T+ +WV + A+
Sbjct: 101 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 155
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 78 KVISQGRDGTVKCWD 92
+++S +DG V WD
Sbjct: 119 RIVSSSQDGKVIVWD 133
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 114 (45.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 32/146 (21%), Positives = 63/146 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
++ G D +++VWD + G + + H + C+ ++G D+ +L+ D
Sbjct: 234 IITGSFDHTVVVWDA-STGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLW--DA 290
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
++G CV + I + K+ ATA D R+YN + L+ H
Sbjct: 291 TSGKCVAT--LTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEI 348
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
+ +SF+ + + S D T +W++
Sbjct: 349 SKISFNPQGNRLLTGSSDKTARIWDV 374
Score = 105 (42.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 33/144 (22%), Positives = 64/144 (44%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L G D + ++WD + G + + H + +L D + + AD +YN
Sbjct: 276 ILTGSMDKTCMLWDATS-GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNA-- 332
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+T C+ K E + IS S P T D+ RI++ + G L +L+ H
Sbjct: 333 TTRKCITKLEGH--EGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEI 390
Query: 353 NAVSFSSDCKLMASASEDSTVALW 376
+ +F+ ++ + S+D++ +W
Sbjct: 391 FSCAFNYKGNIVITGSKDNSCRIW 414
Score = 77 (32.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI 74
RGH A + + F+ ++ G+ ++WD V + H A I+S++ S
Sbjct: 174 RGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAE--IISLSFDTS- 230
Query: 75 GLNKVISQGRDGTVKCWDIENG 96
G +++I+ D TV WD G
Sbjct: 231 G-DRIITGSFDHTVVVWDASTG 251
Score = 74 (31.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 20/84 (23%), Positives = 35/84 (41%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VLR H +T+V ++ G+ ++WDT + + H + ++A
Sbjct: 87 VLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNV--VYAIAFNN 144
Query: 73 SIGLNKVISQGRDGTVKCWDIENG 96
G +K+ + D T K W E G
Sbjct: 145 PYG-DKIATGSFDKTCKLWSAETG 167
Score = 63 (27.2 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 21/88 (23%), Positives = 36/88 (40%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
+ V L GH A + + F + + G+ + +WD R V + H A +S
Sbjct: 210 EEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAE---ISS 266
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENG 96
A S + +++ D T WD +G
Sbjct: 267 ALF-SWDCSLILTGSMDKTCMLWDATSG 293
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/146 (27%), Positives = 63/146 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
++AG + GSI VWD+ I T M H + L SG D I L+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
CV + + + + PD K A+A D V++++ G ++ H
Sbjct: 137 K--GCVFRYRGHSQ--AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
N V F + L+AS S D T+ W+L
Sbjct: 193 NVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 34/160 (21%), Positives = 73/160 (45%)
Query: 219 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS 278
V + + K+ G + + G +D + +W I P + ++ H PV + ++ ++
Sbjct: 23 VSSLVLGKASGRL-LATGGDDCRVNLWSINKPNC-IMSLTGHTSPVESVRLNTPEELIVA 80
Query: 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338
G I +++L+ + I + + + I P + A+ D +++++ R+
Sbjct: 81 GSQSGSIRVWDLE----AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 339 GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + H + FS D K +ASA++D TV LW+L
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 101 (40.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 33/146 (22%), Positives = 61/146 (41%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V +G +D +I +WDIR G + + H + V CL S D + L++L
Sbjct: 120 VASGSQDTNIKLWDIRRKGC-VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL-- 176
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ G + E ++ P+ + A+ DR +R ++ K ++ ++
Sbjct: 177 TAGKMM--SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Query: 353 NAVSFSSD-CKLMASASEDSTVALWE 377
+V F+ D C L + + V WE
Sbjct: 235 RSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 96 (38.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS 67
P+ + L GH + V V + + ++ AG+ G +R+WD + + + H A I S
Sbjct: 53 PNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA--NICS 110
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGG 97
+ P G V S +D +K WDI G
Sbjct: 111 LDFHP-YG-EFVASGSQDTNIKLWDIRRKG 138
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/146 (27%), Positives = 63/146 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
++AG + GSI VWD+ I T M H + L SG D I L+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
CV + + + + PD K A+A D V++++ G ++ H
Sbjct: 137 K--GCVFRYRGHSQ--AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
N V F + L+AS S D T+ W+L
Sbjct: 193 NVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 34/160 (21%), Positives = 73/160 (45%)
Query: 219 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS 278
V + + K+ G + + G +D + +W I P + ++ H PV + ++ ++
Sbjct: 23 VSSLVLGKASGRL-LATGGDDCRVNLWSINKPNC-IMSLTGHTSPVESVRLNTPEELIVA 80
Query: 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338
G I +++L+ + I + + + I P + A+ D +++++ R+
Sbjct: 81 GSQSGSIRVWDLE----AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 339 GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + H + FS D K +ASA++D TV LW+L
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 101 (40.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 33/146 (22%), Positives = 61/146 (41%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V +G +D +I +WDIR G + + H + V CL S D + L++L
Sbjct: 120 VASGSQDTNIKLWDIRRKGC-VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL-- 176
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ G + E ++ P+ + A+ DR +R ++ K ++ ++
Sbjct: 177 TAGKMM--SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Query: 353 NAVSFSSD-CKLMASASEDSTVALWE 377
+V F+ D C L + + V WE
Sbjct: 235 RSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 96 (38.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS 67
P+ + L GH + V V + + ++ AG+ G +R+WD + + + H A I S
Sbjct: 53 PNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA--NICS 110
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGG 97
+ P G V S +D +K WDI G
Sbjct: 111 LDFHP-YG-EFVASGSQDTNIKLWDIRRKG 138
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/146 (27%), Positives = 63/146 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
++AG + GSI VWD+ I T M H + L SG D I L+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
CV + + + + PD K A+A D V++++ G ++ H
Sbjct: 137 K--GCVFRYRGHSQ--AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
N V F + L+AS S D T+ W+L
Sbjct: 193 NVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 34/160 (21%), Positives = 73/160 (45%)
Query: 219 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS 278
V + + K+ G + + G +D + +W I P + ++ H PV + ++ ++
Sbjct: 23 VSSLVLGKASGRL-LATGGDDCRVNLWSINKPNC-IMSLTGHTSPVESVRLNTPEELIVA 80
Query: 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338
G I +++L+ + I + + + I P + A+ D +++++ R+
Sbjct: 81 GSQSGSIRVWDLE----AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 339 GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + H + FS D K +ASA++D TV LW+L
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 101 (40.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 33/146 (22%), Positives = 61/146 (41%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V +G +D +I +WDIR G + + H + V CL S D + L++L
Sbjct: 120 VASGSQDTNIKLWDIRRKGC-VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL-- 176
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ G + E ++ P+ + A+ DR +R ++ K ++ ++
Sbjct: 177 TAGKMM--SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Query: 353 NAVSFSSD-CKLMASASEDSTVALWE 377
+V F+ D C L + + V WE
Sbjct: 235 RSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 96 (38.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS 67
P+ + L GH + V V + + ++ AG+ G +R+WD + + + H A I S
Sbjct: 53 PNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA--NICS 110
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGG 97
+ P G V S +D +K WDI G
Sbjct: 111 LDFHP-YG-EFVASGSQDTNIKLWDIRRKG 138
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/146 (27%), Positives = 63/146 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
++AG + GSI VWD+ I T M H + L SG D I L+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
CV + + + + PD K A+A D V++++ G ++ H
Sbjct: 137 K--GCVFRYRGHSQ--AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
N V F + L+AS S D T+ W+L
Sbjct: 193 NVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 34/160 (21%), Positives = 73/160 (45%)
Query: 219 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS 278
V + + K+ G + + G +D + +W I P + ++ H PV + ++ ++
Sbjct: 23 VSSLVLGKASGRL-LATGGDDCRVNLWSINKPNC-IMSLTGHTSPVESVRLNTPEELIVA 80
Query: 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338
G I +++L+ + I + + + I P + A+ D +++++ R+
Sbjct: 81 GSQSGSIRVWDLE----AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 339 GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + H + FS D K +ASA++D TV LW+L
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 101 (40.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 33/146 (22%), Positives = 61/146 (41%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V +G +D +I +WDIR G + + H + V CL S D + L++L
Sbjct: 120 VASGSQDTNIKLWDIRRKGC-VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL-- 176
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ G + E ++ P+ + A+ DR +R ++ K ++ ++
Sbjct: 177 TAGKMM--SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Query: 353 NAVSFSSD-CKLMASASEDSTVALWE 377
+V F+ D C L + + V WE
Sbjct: 235 RSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 96 (38.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS 67
P+ + L GH + V V + + ++ AG+ G +R+WD + + + H A I S
Sbjct: 53 PNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA--NICS 110
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGG 97
+ P G V S +D +K WDI G
Sbjct: 111 LDFHP-YG-EFVASGSQDTNIKLWDIRRKG 138
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 108 (43.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE 369
++ S+ PD+ G D V +Y++ G+ + + K HH N FS D AS S
Sbjct: 224 VNCASLHPDNSKFIAGGSDFWVHVYDFSTGNEIEVNKGHHGPVNCCRFSPDGASFASGSL 283
Query: 370 DSTVALWE 377
D T+ LW+
Sbjct: 284 DGTIRLWK 291
Score = 78 (32.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 45/207 (21%), Positives = 82/207 (39%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
D + GH+ +V F+ T + +++WDT+ + S + S H +
Sbjct: 47 DWIGTFEGHKGAVWSSRFNSTASQALTASADYTVKLWDTL-----NGSEILSIEHQSIVK 101
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIK--TNSYHFCKLSLVKEPYANA 126
S ++V++ G + ++ +D+E ++P L I TN+ S+ + +
Sbjct: 102 TADFSNNNSRVVTGGSEKILRIFDLER---PNDPLLQISGHTNTIKTATWSVHNDDIVLS 158
Query: 127 KQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD----VPAEGPKYMAVAGEQLSE 182
+E ++ G V SLC +K S S E D V G + +
Sbjct: 159 GGLDEVIRIWDLRSGTQV---SLC-AKSSITSMEFSKDRRFLVTTAGNEVTFWDAQSFYP 214
Query: 183 VEIWDLNTAERCTRLH-QNS---CGGS 205
++++ L C LH NS GGS
Sbjct: 215 LKVYSLPFDVNCASLHPDNSKFIAGGS 241
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 139 (54.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 207 NFSSKGRGMCMAVQAYLPSKS--QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 264
N ++K + + M YL + S + +L DG+ +WD+ + G L + H V
Sbjct: 183 NMAAKKKSVAMHTN-YLSACSFTNSDMQILTASGDGTCALWDVES-GQLLQSFHGHGADV 240
Query: 265 LCLSI--DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 322
LCL + E+ N +SGG D+K +++ D +G CV + ++ P
Sbjct: 241 LCLDLAPSETGNTFVSGGCDKKAMVW--DMRSGQCV--QAFETHESDVNSVRYYPSGDAF 296
Query: 323 ATAGWDRRVRIYNYRKGSALAILKYHHATCNA--VSFSSDCKLMASASEDSTVALWEL 378
A+ D R+Y+ R +AI A V FS +L+ + D T+ +W++
Sbjct: 297 ASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 354
Score = 101 (40.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 44/169 (26%), Positives = 70/169 (41%)
Query: 209 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLS 268
S G G + PS++ G V G D +VWD+R+ G + A + H V +
Sbjct: 232 SFHGHGADVLCLDLAPSET-GNTFVSGGC-DKKAMVWDMRS-GQCVQAFETHESDVNSVR 288
Query: 269 IDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW- 327
S + SG D LY+L + KE + G S ++ AG+
Sbjct: 289 YYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF--GASSVDFSLSGRLLF-AGYN 345
Query: 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
D + +++ KGS ++IL H + + S D S S D T+ +W
Sbjct: 346 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 394
Score = 52 (23.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 78 KVISQGRDGTVKCWDIENGGL 98
++++ DGT WD+E+G L
Sbjct: 209 QILTASGDGTCALWDVESGQL 229
Score = 48 (22.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV----QHR-TVSSSWVHSAAH 63
L+GH V + + + K + + + G++ +WD+ +H T+ +WV + A+
Sbjct: 101 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 155
Score = 41 (19.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 78 KVISQGRDGTVKCWD 92
+++S +DG V WD
Sbjct: 119 RIVSSSQDGKVIVWD 133
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 32/146 (21%), Positives = 65/146 (44%)
Query: 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291
++ +G D ++++W ++ P H + V C++ S + SG D+ + ++ +
Sbjct: 33 HLASGSMDSTLMIWHMK-PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VP 90
Query: 292 HSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
+ G + + D ++ TA D+ V++++ + L L H
Sbjct: 91 NVKGESTV---FRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINW 147
Query: 352 CNAVSFSSDCKLMASASEDSTVALWE 377
FS D +L+ SAS+D TV LW+
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 111 (44.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 38/153 (24%), Positives = 65/153 (42%)
Query: 227 SQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIV 286
S G + V A +D ++ VW L ++ H+ V C +S D+ +
Sbjct: 113 SDGQLLVTAS-DDKTVKVWSTHRQRF-LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 287 LYNLDHSTGSCVIKKEINLERPG-ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL 345
L+ D ++ CV E G ++ P A AG D V++++ R +
Sbjct: 171 LW--DKTSRECV---HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHY 225
Query: 346 KYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ H A NA+SF + +AS DST+ + +L
Sbjct: 226 QLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Score = 81 (33.6 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 24/100 (24%), Positives = 39/100 (39%)
Query: 278 SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 337
+ G D + ++ D T V + L ++ S P TA D ++I +
Sbjct: 204 AAGMDNTVKVW--DTRTHRLV--QHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLM 259
Query: 338 KGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+G L L H V+FS + AS D V +W+
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 76 (31.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 32/104 (30%), Positives = 42/104 (40%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH--GIVSVATGP 72
+GHR +VT V F L +G+ L IW H S H + V P
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIW----HMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 73 SIGLNKVISQGRDGTVKCWDIEN--GGLSSNPSLTIKTNSYHFC 114
S L + S RD TV+ W + N G + + T S HFC
Sbjct: 72 SGHL--LASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC 112
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 111 (44.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 28/102 (27%), Positives = 56/102 (54%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D + ++N T + + +++ ++ PD++ A+A +D+ V+++
Sbjct: 333 VSGSDDFTLFMWN-PKETKQSINRMTGHMQL--VNQVVFSPDTRYIASASFDKSVKLWCG 389
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
R G LA L+ H V++S+D +L+ S S DST+ ++EL
Sbjct: 390 RTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFEL 431
Score = 81 (33.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 35/135 (25%), Positives = 56/135 (41%)
Query: 14 LRGHRASVTDVCF---HQTKPILFAGTTG--GELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
L+ H+ +T + + H+ + G G + IWDTVQ V H+A+ + +
Sbjct: 186 LKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTAS--VTCL 243
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ 128
G GL + S +D TVK W ++G + N T H+ + YA
Sbjct: 244 RWGGE-GL--IYSGSQDRTVKMWRADDGVMCRN-----MTGHAHWINTLALNTDYALRTS 295
Query: 129 ANEP-KDCYEREVGE 142
EP K C + + E
Sbjct: 296 CFEPSKRCIKPDTVE 310
Score = 54 (24.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/90 (20%), Positives = 35/90 (38%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P+ + H++ V + + + + GE+ IW+ + + + I S+A
Sbjct: 139 PLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKT-LKRHKQWITSLA 197
Query: 70 TGP---SIGLNKVISQGRDGTVKCWDIENG 96
P + S G+DG + WD G
Sbjct: 198 WQPMHKDPTCRLLASCGKDGNIFIWDTVQG 227
Score = 51 (23.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 11 VAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIW---DTVQHRTVS--SSWVHSAA 62
V L GH ASVT C + ++++G+ +++W D V R ++ + W+++ A
Sbjct: 230 VRCLSGHTASVT--CLRWGGEGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLA 285
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 107 (42.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 52/220 (23%), Positives = 94/220 (42%)
Query: 5 PPPPDPVAV-------LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW 57
PPPP P +V LRGH V+ V F ++ +G G +++W + + +
Sbjct: 156 PPPPKPESVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFE 215
Query: 58 VHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLS 117
H A GI +++ P G + S D T++ W++ G ++P+ I ++Y + +
Sbjct: 216 GHLA--GISTISWSPD-GAT-IASGSDDKTIRLWNVLTG--KAHPTPFIGHHNYVY---A 266
Query: 118 LVKEPYANAKQANEPKDC-YEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVA 176
+ P N + + + +V SL + +++ D G + A
Sbjct: 267 IAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWD----GTLIASCA 322
Query: 177 GEQLSEVEIWDLNTAERCTR--LHQ-NSCGGSPNFSSKGR 213
+ L V IWD +T + C R +H+ N S FS G+
Sbjct: 323 TDGL--VRIWDTSTGQ-CLRTLVHEDNPPVSSVKFSPNGK 359
Score = 86 (35.3 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 34/125 (27%), Positives = 62/125 (49%)
Query: 183 VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 242
V +WD RC + +Q + +S G + Q+ +P ++ G+ ++G EDG+I
Sbjct: 370 VRLWDY-VEGRCLKTYQGH--SNKKYSLSG-AFGVYGQS-IPGRTPGYAFAVSGSEDGAI 424
Query: 243 LVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE 302
L WD+ + L ++ H + V+ L +D +C S G + +V LD G+ + +E
Sbjct: 425 LCWDVVTKKV-LQRIEAH-DGVV-LGVD-TC----STGEGRFMVSCGLD---GTVRVWEE 473
Query: 303 INLER 307
+ ER
Sbjct: 474 VGPER 478
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 125 (49.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 260 HLEPVLCLSIDESCNGGI--SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317
H PV+C+ I S +G + +G AD+ + ++ LD G C K + + P
Sbjct: 590 HKLPVICMDI--SYDGALIATGSADRNVKIWGLDF--GDC--HKSLFAHDDSVMYLRFVP 643
Query: 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT--CNAVSFSSDCKLMASASEDSTVAL 375
S + TAG DR+++ ++ K + L+ HH C AVS S D + S+S D ++ L
Sbjct: 644 KSHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGD--YVVSSSHDKSLRL 701
Query: 376 WE 377
WE
Sbjct: 702 WE 703
Score = 73 (30.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
GH+A++T + + Q L +G+ ++ +WD + + H A ++ A
Sbjct: 105 GHKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDA---ITQALFLR-E 160
Query: 76 LNKVISQGRDGTVKCWDIE 94
N +++ G+D VK WD++
Sbjct: 161 KNLLVTSGKDTMVKWWDLD 179
Score = 64 (27.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 19/81 (23%), Positives = 36/81 (44%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDT-VQHRTVSSSWVHSAAHGIVSVATGP 72
L+GH+ ++T F + K +L ++ WD QH + + G+V V+
Sbjct: 145 LKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEE- 203
Query: 73 SIGLNKVISQGRDGTVKCWDI 93
++I+ D ++ WDI
Sbjct: 204 ----KRLITGASDSELRAWDI 220
Score = 52 (23.4 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
+ + +L+G + VT +C L G G +RI+ + + H AA I S+
Sbjct: 56 EKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAA--ITSL 113
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIEN-GGL 98
+G ++ S +D + WD+ N GL
Sbjct: 114 KYD-QLG-GRLASGSKDTDIIVWDVINESGL 142
Score = 41 (19.5 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL----HQNSC 202
V G K VA V IWDL E+ L H+ +C
Sbjct: 29 VTLRGEKGRYVAVPACEHVFIWDLRKGEKILILQGLKHEVTC 70
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/146 (27%), Positives = 63/146 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
++AG + GSI VWD+ I T M H + L SG D I L+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
CV + + + + PD K A+A D V++++ G ++ H
Sbjct: 137 K--GCVFRYRGHSQ--AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
N V F + L+AS S D T+ W+L
Sbjct: 193 NVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 34/160 (21%), Positives = 73/160 (45%)
Query: 219 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS 278
V + + K+ G + + G +D + +W I P + ++ H PV + ++ ++
Sbjct: 23 VSSLVLGKASGRL-LATGGDDCRVNLWSINKPNC-IMSLTGHTSPVESVRLNTPEELIVA 80
Query: 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338
G I +++L+ + I + + + I P + A+ D +++++ R+
Sbjct: 81 GSQSGSIRVWDLE----AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 339 GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + H + FS D K +ASA++D TV LW+L
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 100 (40.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 32/146 (21%), Positives = 61/146 (41%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V +G +D +I +WDIR G + + H + V CL S D + L++L
Sbjct: 120 VASGSQDTNIKLWDIRRKGC-VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL-- 176
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ G + E ++ P+ + A+ DR +R ++ K ++ ++
Sbjct: 177 TAGKMM--SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Query: 353 NAVSFSSD-CKLMASASEDSTVALWE 377
++ F+ D C L + + V WE
Sbjct: 235 RSILFNPDGCCLYSGCQDSLRVYGWE 260
Score = 96 (38.9 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS 67
P+ + L GH + V V + + ++ AG+ G +R+WD + + + H A I S
Sbjct: 53 PNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA--NICS 110
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGG 97
+ P G V S +D +K WDI G
Sbjct: 111 LDFHP-YG-EFVASGSQDTNIKLWDIRRKG 138
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 138 (53.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 207 NFSSKGRGMCMAVQAYLPSKS--QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 264
N ++K + + M YL + S + +L DG+ +WD+ + G L + H V
Sbjct: 183 NMAAKKKSVAMHTN-YLSACSFTNSDMQILTASGDGTCALWDVES-GQLLQSFHGHGADV 240
Query: 265 LCLSI--DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 322
LCL + E+ N +SGG D+K +++ D +G C+ + I+ P
Sbjct: 241 LCLDLAPSETGNTFVSGGCDKKAMVW--DMRSGQCI--QSFETHDSDINSVRYYPSGDAF 296
Query: 323 ATAGWDRRVRIYNYRKGSALAILKYHHATCNA--VSFSSDCKLMASASEDSTVALWEL 378
A+ D R+Y+ R +AI A V FS +L+ + D T+ +W++
Sbjct: 297 ASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 354
Score = 98 (39.6 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 42/169 (24%), Positives = 70/169 (41%)
Query: 209 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLS 268
S G G + PS++ G V G D +VWD+R+ G + + + H + +
Sbjct: 232 SFHGHGADVLCLDLAPSET-GNTFVSGGC-DKKAMVWDMRS-GQCIQSFETHDSDINSVR 288
Query: 269 IDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW- 327
S + SG D LY+L + KE + G S ++ AG+
Sbjct: 289 YYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF--GASSVDFSLSGRLLF-AGYN 345
Query: 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
D + +++ KGS ++IL H + + S D S S D T+ +W
Sbjct: 346 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRIW 394
Score = 52 (23.4 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 78 KVISQGRDGTVKCWDIENGGL 98
++++ DGT WD+E+G L
Sbjct: 209 QILTASGDGTCALWDVESGQL 229
Score = 48 (22.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV----QHR-TVSSSWVHSAAH 63
L+GH V + + + K + + + G++ +WD+ +H T+ +WV + A+
Sbjct: 101 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 155
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 78 KVISQGRDGTVKCWD 92
+++S +DG V WD
Sbjct: 119 RIVSSSQDGKVIVWD 133
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 134 (52.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG++ +WD+ G H + VL ++ +SG D+ I L+N +
Sbjct: 38 LSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---T 93
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G C + +S P+S I + GWD+ V+++N H
Sbjct: 94 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 153
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 154 LNTVTVSPDGSLCASGGKDGQAMLWDL 180
Score = 97 (39.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P LRGH V+DV +G+ G LR+WD T H+ ++SVA
Sbjct: 14 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK--DVLSVA 71
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S +++S RD T+K W+
Sbjct: 72 F--SSDNRQIVSGSRDKTIKLWN 92
Score = 74 (31.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 26/116 (22%), Positives = 53/116 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
+++G D +I +W+ + H E V C+ + + I S G D+ + ++NL
Sbjct: 79 IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 138
Query: 291 DHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIYNYRKGSALAIL 345
+C +K ++ G T ++ PD + A+ G D + +++ +G L L
Sbjct: 139 ----ANCKLKTN-HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 189
>FB|FBgn0034876 [details] [associations]
symbol:wmd "wing morphogenesis defect" species:7227
"Drosophila melanogaster" [GO:0005102 "receptor binding"
evidence=ISS] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007476 GeneTree:ENSGT00630000089849 KO:K13137 OMA:LWQTTVG
EMBL:AY061000 RefSeq:NP_001097436.1 RefSeq:NP_611804.1
UniGene:Dm.3756 SMR:Q9W1N4 STRING:Q9W1N4 EnsemblMetazoa:FBtr0072114
EnsemblMetazoa:FBtr0113112 GeneID:37727 KEGG:dme:Dmel_CG3957
UCSC:CG3957-RA CTD:37727 FlyBase:FBgn0034876 InParanoid:Q9W1N4
OrthoDB:EOG4QBZMZ ChiTaRS:wmd GenomeRNAi:37727 NextBio:805102
Uniprot:Q9W1N4
Length = 328
Score = 135 (52.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 41/147 (27%), Positives = 73/147 (49%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEP-VLCLSIDESCNGGISGGADQKIVLYNLD 291
+++ ED ++ +WD R GI + ++ + P L +S D IS G+ I + +D
Sbjct: 161 IISAAEDKTVRLWD-RMTGIEVQRLQFNSNPNSLEISSDNHILT-ISHGSS--ISFWEID 216
Query: 292 HSTGSCVIKKEINLERP-GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
+KK ++ P ++ S+ PD + G D ++ ++Y G+ + K H
Sbjct: 217 ------TLKKLKEVKVPTNVASASLHPDKHVFVCGGEDFKMYKFDYITGNEIESFKGHFG 270
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWE 377
++V FS D +L AS SED T+ LW+
Sbjct: 271 PVHSVKFSPDGELYASGSEDGTLRLWQ 297
Score = 48 (22.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
D V GH+ +V + ++ + +G ++W+ V + S + H H + SV
Sbjct: 53 DWVGTFEGHKGAVWNATLNRNATLAASGAADFTGKVWNAVTGAEIHS-FQHK--HIVKSV 109
Query: 69 A 69
A
Sbjct: 110 A 110
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 136 (52.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 47/181 (25%), Positives = 80/181 (44%)
Query: 207 NFSSKGRGMCMAVQAYLPSKSQGFVN-----VLAGYEDGSILVWDIRNPGIPLTAMKVHL 261
N ++K + + M YL + S F N +L DG+ +WD+ + G L + H
Sbjct: 141 NMAAKKKSVAMHTN-YLSACS--FTNSDMQQILTASGDGTCALWDVES-GQLLQSFHGHG 196
Query: 262 EPVLCLSI--DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319
VLCL + E+ N +SGG D+K +++ D +G C+ + I+ P
Sbjct: 197 ADVLCLDLAPSETGNTFVSGGCDKKAMVW--DMRSGQCI--QAFETHESDINSVRYYPSG 252
Query: 320 KIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA--VSFSSDCKLMASASEDSTVALWE 377
A+ D R+Y+ R +AI A V FS +L+ + D T+ +W+
Sbjct: 253 DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 312
Query: 378 L 378
+
Sbjct: 313 V 313
Score = 101 (40.6 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 43/169 (25%), Positives = 70/169 (41%)
Query: 209 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLS 268
S G G + PS++ G V G D +VWD+R+ G + A + H + +
Sbjct: 191 SFHGHGADVLCLDLAPSET-GNTFVSGGC-DKKAMVWDMRS-GQCIQAFETHESDINSVR 247
Query: 269 IDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW- 327
S + SG D LY+L + KE + G S ++ AG+
Sbjct: 248 YYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF--GASSVDFSLSGRLLF-AGYN 304
Query: 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
D + +++ KGS ++IL H + + S D S S D T+ +W
Sbjct: 305 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353
Score = 55 (24.4 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 61 AAH-GIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98
A H +S + + + ++++ DGT WD+E+G L
Sbjct: 150 AMHTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQL 188
Score = 48 (22.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV----QHR-TVSSSWVHSAAH 63
L+GH V + + + K + + + G++ +WD+ +H T+ +WV + A+
Sbjct: 59 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 113
Score = 41 (19.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 78 KVISQGRDGTVKCWD 92
+++S +DG V WD
Sbjct: 77 RIVSSSQDGKVIVWD 91
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 150 (57.9 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV 298
D + +W PL HL V C+ + N +G D+ + L++ G+ V
Sbjct: 417 DRTARLWSFART-YPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQ--GASV 473
Query: 299 IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFS 358
+ R + + P+ K A+AG D+R+++++ G L+ H T +++SFS
Sbjct: 474 --RLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFS 531
Query: 359 SDCKLMASASEDSTVALWELYPPH 382
D L+ASAS D+TV +W++ H
Sbjct: 532 QDSSLVASASMDNTVRVWDIRNAH 555
Score = 40 (19.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 79 VISQGRDGTVKCWDIEN 95
++S D TV+ WD+++
Sbjct: 369 LLSCSEDSTVRYWDLKS 385
Score = 40 (19.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD 46
+ LRGH V F L + + +R WD
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWD 382
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 111 (44.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 34/148 (22%), Positives = 63/148 (42%)
Query: 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291
+++ +D ++ VW L ++ H+ V C +S D+ + L+ D
Sbjct: 117 SLVTASDDKTVKVWSTHRQRF-LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW--D 173
Query: 292 HSTGSCVIKKEINLERPG-ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
++ C+ E G ++ P A AG D V++++ R L + H A
Sbjct: 174 KTSRECI---HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSA 230
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+SF + +AS DST+ + +L
Sbjct: 231 AVNALSFHPSGNYLITASSDSTLKILDL 258
Score = 77 (32.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 35/116 (30%), Positives = 45/116 (38%)
Query: 5 PPPPDPVAV--LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA 62
P DP +GHR +VT V F L +G+ L IW H S
Sbjct: 4 PSQEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIW----HMKPQSRAYRFTG 59
Query: 63 H--GIVSVATGPSIGLNKVISQGRDGTVKCWDIEN--GGLSSNPSLTIKTNSYHFC 114
H + V PS L + S RD TV+ W + N G + + T S HFC
Sbjct: 60 HKDAVTCVNFSPSGHL--LASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC 112
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 107 (42.7 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 34/141 (24%), Positives = 67/141 (47%)
Query: 238 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC 297
+D +I +WD + +K H V + + +SG D+ + ++NL G+C
Sbjct: 116 DDKTIRIWDFEKR-CSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQD--GTC 172
Query: 298 VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYHHATCNAVS 356
+ + E P IS SI D + ATA +D RI++ G L +++ + + +
Sbjct: 173 LRMLPAHSE-PIIS-VSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQ 230
Query: 357 FSSDCKLMASASEDSTVALWE 377
F+ + K + ++ +S + LW+
Sbjct: 231 FTENRKYLLVSNLNSQIRLWD 251
Score = 96 (38.9 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 31/131 (23%), Positives = 64/131 (48%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D ++ +W++++ G L + H EP++ +SI S +G + A + D
Sbjct: 153 LVSGSWDETVRIWNLQD-GTCLRMLPAHSEPIISVSI--SADGTLCATASYDGMARIWDV 209
Query: 293 STGSCV--IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
+G C+ + + IN+ P +S + K + + ++R+++YR+ + I H
Sbjct: 210 LSGQCLKTLVEPINV--P-LSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVN 266
Query: 351 TCNAVSFSSDC 361
T S S DC
Sbjct: 267 T--RYSMSWDC 275
Score = 80 (33.2 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 23/81 (28%), Positives = 34/81 (41%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH SVT V K + ++ G ++IW + R + + H V ATG
Sbjct: 50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSK 109
Query: 74 IGLNKVISQGRDGTVKCWDIE 94
+ S D T++ WD E
Sbjct: 110 Y----LASASDDKTIRIWDFE 126
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 141 (54.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 4 RPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH 63
R P+PVA GHR +VT V F Q + + G +++WD V+ ++ ++ H+A
Sbjct: 61 RTTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWD-VRSPSIPRNYKHNAP- 118
Query: 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPY 123
+ V P+ G ++IS RDG ++ WD+ G LT + ++ LS+ +
Sbjct: 119 -VNEVVIHPNQG--ELISCDRDGNIRIWDL--GENQCTHQLTPEDDT-SLQSLSMASDGS 172
Query: 124 ANAKQANEPKDCYEREVGETVDTDSL 149
A AN +CY E+ D L
Sbjct: 173 MLAA-ANTKGNCYVWEMPNHTDASHL 197
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 32/107 (29%), Positives = 53/107 (49%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+S G D I + + TG C + I ++ I D K+ ATAG + VR+Y+
Sbjct: 6 VSAGYDHTIRFW--EALTGVC--SRTIQHSDSQVNRLEITNDKKLLATAG-HQNVRLYDI 60
Query: 337 R--KGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381
R + +A + H +VSF D + M ++SED T+ +W++ P
Sbjct: 61 RTTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWDVRSP 107
Score = 110 (43.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 40/147 (27%), Positives = 66/147 (44%)
Query: 238 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC 297
EDG+I VWD+R+P IP H PV + I + IS D I +++L + +
Sbjct: 95 EDGTIKVWDVRSPSIPRNYK--HNAPVNEVVIHPNQGELISCDRDGNIRIWDLGENQCTH 152
Query: 298 VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIY---NYRKGSALA-ILKYH-HAT- 351
+ E + + S+ D + A A ++ N+ S L + K+ H+T
Sbjct: 153 QLTPE---DDTSLQSLSMASDGSMLAAANTKGNCYVWEMPNHTDASHLKPVTKFRAHSTY 209
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
+ SSD K +A+ S D T +W +
Sbjct: 210 ITRILLSSDVKHLATCSADHTARVWSI 236
Score = 41 (19.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 20/112 (17%), Positives = 47/112 (41%)
Query: 79 VISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYER 138
++S G D T++ W+ G S TI+ + +L + + A ++ Y+
Sbjct: 5 LVSAGYDHTIRFWEALTGVCSR----TIQHSDSQVNRLEITNDKKLLATAGHQNVRLYDI 60
Query: 139 EVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNT 190
T + + + S E +R + + ++M + E +++WD+ +
Sbjct: 61 R---TTNPNPVA-SFEGHRG-NVTSVSFQQDNRWMVTSSED-GTIKVWDVRS 106
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 145 (56.1 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 47/184 (25%), Positives = 76/184 (41%)
Query: 198 HQNSCGGSPNFSSKGRGMCMAVQA---YLPSKS-QGFVNVLAGYEDGSILVWDIRNPGIP 253
H N + F K C +L S S GF+ V Y G L D++
Sbjct: 200 HPNVLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVW-DYISGK-LKKDLQYQADE 257
Query: 254 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGT 313
+ +H +PVLC+ SG D KI ++ + TG C+ + + G++
Sbjct: 258 --SFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRI--RTGVCI--RRFDAHSQGVTSL 311
Query: 314 SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTV 373
S D + +D+ RI+ + G L + H + N F+SD + +AS D TV
Sbjct: 312 SFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTV 371
Query: 374 ALWE 377
+W+
Sbjct: 372 KVWD 375
>UNIPROTKB|E1BCH1 [details] [associations]
symbol:MAPKBP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007256 "activation of JNKK activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0007256 OMA:EDGIVYP
GeneTree:ENSGT00620000087755 EMBL:DAAA02028569 IPI:IPI00707220
Ensembl:ENSBTAT00000032090 Uniprot:E1BCH1
Length = 1504
Score = 109 (43.4 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 30/104 (28%), Positives = 52/104 (50%)
Query: 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR----PDSKIAATAGWDRRVRIY 334
G D+ I ++N+ S+G +K++ G GT I+ P AT+ D+ + I+
Sbjct: 629 GCQDRNIRIFNI--SSGK---QKKLFKGSQGEDGTLIKVQTDPSGIYIATSCSDKNLSIF 683
Query: 335 NYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
++ G +A + H + FS+DCK + S S DS + +W L
Sbjct: 684 DFSSGECVATMFGHSEIVTGMKFSNDCKHLISVSGDSCIFVWRL 727
Score = 80 (33.2 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGG--ELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+L R ++T + F L G +G +R+WD +H V+ H +G+ VA
Sbjct: 86 ILNSSRKTITALAFSPDGKYLVTGESGHMPAVRVWDVAEHSQVAELQEHK--YGVACVAF 143
Query: 71 GPSIGLNKVISQGRDGTVKCW 91
PS + D V W
Sbjct: 144 SPSAKYIVSVGYQHDMIVNVW 164
Score = 55 (24.4 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 237 YEDGSILVWDIRNP 250
Y D SI VWD+R+P
Sbjct: 358 YNDHSIYVWDVRDP 371
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 136 (52.9 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 47/181 (25%), Positives = 80/181 (44%)
Query: 207 NFSSKGRGMCMAVQAYLPSKSQGFVN-----VLAGYEDGSILVWDIRNPGIPLTAMKVHL 261
N ++K + + M YL + S F N +L DG+ +WD+ + G L + H
Sbjct: 183 NMAAKKKSVAMHTN-YLSACS--FTNSDMQQILTASGDGTCALWDVES-GQLLQSFHGHG 238
Query: 262 EPVLCLSI--DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319
VLCL + E+ N +SGG D+K +++ D +G C+ + I+ P
Sbjct: 239 ADVLCLDLAPSETGNTFVSGGCDKKAMVW--DMRSGQCI--QAFETHESDINSVRYYPSG 294
Query: 320 KIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA--VSFSSDCKLMASASEDSTVALWE 377
A+ D R+Y+ R +AI A V FS +L+ + D T+ +W+
Sbjct: 295 DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 354
Query: 378 L 378
+
Sbjct: 355 V 355
Score = 101 (40.6 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 43/169 (25%), Positives = 70/169 (41%)
Query: 209 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLS 268
S G G + PS++ G V G D +VWD+R+ G + A + H + +
Sbjct: 233 SFHGHGADVLCLDLAPSET-GNTFVSGGC-DKKAMVWDMRS-GQCIQAFETHESDINSVR 289
Query: 269 IDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW- 327
S + SG D LY+L + KE + G S ++ AG+
Sbjct: 290 YYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF--GASSVDFSLSGRLLF-AGYN 346
Query: 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
D + +++ KGS ++IL H + + S D S S D T+ +W
Sbjct: 347 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 395
Score = 55 (24.4 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 61 AAH-GIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98
A H +S + + + ++++ DGT WD+E+G L
Sbjct: 192 AMHTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQL 230
Score = 48 (22.0 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV----QHR-TVSSSWVHSAAH 63
L+GH V + + + K + + + G++ +WD+ +H T+ +WV + A+
Sbjct: 101 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 155
Score = 41 (19.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 78 KVISQGRDGTVKCWD 92
+++S +DG V WD
Sbjct: 119 RIVSSSQDGKVIVWD 133
>UNIPROTKB|O60336 [details] [associations]
symbol:MAPKBP1 "Mitogen-activated protein kinase-binding
protein 1" species:9606 "Homo sapiens" [GO:0007256 "activation of
JNKK activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 EMBL:CH471125 GO:GO:0007256 EMBL:AB177850
EMBL:AB011168 EMBL:AK292414 EMBL:AL833267 EMBL:AC020659
EMBL:AC073657 EMBL:BC036660 EMBL:BC113983 EMBL:BC114493
IPI:IPI00167154 IPI:IPI00479587 IPI:IPI00782945 IPI:IPI00783044
IPI:IPI00943806 IPI:IPI00963846 PIR:T00270 RefSeq:NP_001122080.1
RefSeq:NP_001252540.1 RefSeq:NP_055809.2 UniGene:Hs.513661
ProteinModelPortal:O60336 SMR:O60336 IntAct:O60336
MINT:MINT-2870106 STRING:O60336 PhosphoSite:O60336 PaxDb:O60336
PRIDE:O60336 Ensembl:ENST00000456763 Ensembl:ENST00000457542
Ensembl:ENST00000514566 GeneID:23005 KEGG:hsa:23005 UCSC:uc001zoj.4
UCSC:uc001zok.4 UCSC:uc010bci.3 UCSC:uc010bck.3 UCSC:uc010bcl.3
CTD:23005 GeneCards:GC15P042067 H-InvDB:HIX0022002 HGNC:HGNC:29536
HPA:HPA030832 neXtProt:NX_O60336 PharmGKB:PA142671479
HOVERGEN:HBG108669 InParanoid:O60336 OMA:EDGIVYP ChiTaRS:MAPKBP1
GenomeRNAi:23005 NextBio:43917 ArrayExpress:O60336 Bgee:O60336
CleanEx:HS_MAPKBP1 Genevestigator:O60336 Uniprot:O60336
Length = 1514
Score = 109 (43.4 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 30/104 (28%), Positives = 52/104 (50%)
Query: 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR----PDSKIAATAGWDRRVRIY 334
G D+ I ++N+ S+G +K++ G GT I+ P AT+ D+ + I+
Sbjct: 634 GCQDRNIRIFNI--SSGK---QKKLFKGSQGEDGTLIKVQTDPSGIYIATSCSDKNLSIF 688
Query: 335 NYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
++ G +A + H + FS+DCK + S S DS + +W L
Sbjct: 689 DFSSGECVATMFGHSEIVTGMKFSNDCKHLISVSGDSCIFVWRL 732
Score = 80 (33.2 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGG--ELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+L R ++T + F L G +G +R+WD +H V+ H +G+ VA
Sbjct: 85 ILNSSRKTITALAFSPDGKYLVTGESGHMPAVRVWDVAEHSQVAELQEHK--YGVACVAF 142
Query: 71 GPSIGLNKVISQGRDGTVKCW 91
PS + D V W
Sbjct: 143 SPSAKYIVSVGYQHDMIVNVW 163
Score = 55 (24.4 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 237 YEDGSILVWDIRNP 250
Y D SI VWD+R+P
Sbjct: 363 YNDHSIYVWDVRDP 376
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 148 (57.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 52/211 (24%), Positives = 94/211 (44%)
Query: 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ 228
GP + + L +V IWD+ T + ++L G P +S RG A YL +
Sbjct: 37 GPGQLITSA--LEDVNIWDIKTGDLVSKLSD----GLPPGASDARGAKPAECTYLEAHKD 90
Query: 229 GFVNVLA-GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVL 287
++LA GY DG I VWD+ + + L H + L D + ISG D I++
Sbjct: 91 --TDLLAVGYADGVIKVWDLMSKTVLLN-FNGHKAAITLLQFDGTGTRLISGSKDSNIIV 147
Query: 288 YNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY 347
++L G + K + + I+G + + + +T+ D +++++ + +
Sbjct: 148 WDL---VGEVGLYK-LRSHKDSITGFWCQGEDWLISTSK-DGMIKLWDLKTHQCIETHIA 202
Query: 348 HHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H C ++ D L+ + DS V +W+L
Sbjct: 203 HTGECWGLAVKDD--LLITTGTDSQVKIWKL 231
Score = 94 (38.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/118 (24%), Positives = 51/118 (43%)
Query: 260 HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319
H PVL + I I+ AD+ I ++ LD G C K + + I P S
Sbjct: 572 HKLPVLSIDISFDSKMIITSSADKNIKIWGLDF--GDC--HKSLFAHQDSIMNVKFLPQS 627
Query: 320 KIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ D V+ ++ K + L H + A++ ++D + S+S D ++ +WE
Sbjct: 628 HNFFSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWE 685
Score = 81 (33.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 27/111 (24%), Positives = 50/111 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
LR H+ S+T + Q + L + + G +++WD H+ + + H+ G +
Sbjct: 159 LRSHKDSITGF-WCQGEDWLISTSKDGMIKLWDLKTHQCIETHIAHTGE------CWGLA 211
Query: 74 IGLNKVISQGRDGTVKCW--DIEN---GGLSSNPSLTIKTNSYHFCKLSLV 119
+ + +I+ G D VK W DIEN GG + + K + K+ +
Sbjct: 212 VKDDLLITTGTDSQVKIWKLDIENDKMGGKLTEMGIFEKQSKQRGLKIEFI 262
Score = 75 (31.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
GH+A++T + F T L +G+ + +WD V V + S I G
Sbjct: 119 GHKAAITLLQFDGTGTRLISGSKDSNIIVWDLVGE--VGLYKLRSHKDSITGFWCQ---G 173
Query: 76 LNKVISQGRDGTVKCWDIE 94
+ +IS +DG +K WD++
Sbjct: 174 EDWLISTSKDGMIKLWDLK 192
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 36/139 (25%), Positives = 62/139 (44%)
Query: 238 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC 297
ED +I VWD + T +K H + V ++ID + +S +D I L++ T C
Sbjct: 126 EDATIKVWDYETGQLERT-LKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQ-TYDC 183
Query: 298 VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSF 357
+ K + +S + P +A D ++ ++ G + + H+ +
Sbjct: 184 L--KSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRI 241
Query: 358 SSDCKLMASASEDSTVALW 376
S+D L ASAS D TV +W
Sbjct: 242 SNDGTLFASASLDQTVTVW 260
Score = 104 (41.7 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 49/231 (21%), Positives = 94/231 (40%)
Query: 160 EIIDDVPAEGP-KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMA 218
+ ++D+ + K + LS +++WD C + S KG ++
Sbjct: 149 DAVNDIAIDAAGKQLVSCSSDLS-IKLWDFGQTYDCLK------------SLKGHEHTVS 195
Query: 219 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS 278
+LP+ FV L+ D +I WDI + G + + H + V + I S
Sbjct: 196 SVTFLPTGD--FV--LSASRDHTIKQWDI-STGYCVYTFRGHNDWVRMIRISNDGTLFAS 250
Query: 279 GGADQKIVLYNLDHSTGSCVIKK-EINLE----RPGISGTSI---RPDSK---IAATAGW 327
DQ + +++ + V++ E +E P + T++ +P+ I +
Sbjct: 251 ASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSR 310
Query: 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
DR ++ +N G L L H ++F K + S ++D T+ +WEL
Sbjct: 311 DRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWEL 361
Score = 83 (34.3 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD--TVQ-HRTVSSSWVHSA 61
P PP+ L GHR +T V FH I+ + + +++WD T Q RT+ H+
Sbjct: 94 PRPPE-TQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKG---HTD 149
Query: 62 AHGIVSV-ATGPSIGLNKVISQGRDGTVKCWD 92
A +++ A G +++S D ++K WD
Sbjct: 150 AVNDIAIDAAG-----KQLVSCSSDLSIKLWD 176
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 145 (56.1 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 36/143 (25%), Positives = 66/143 (46%)
Query: 236 GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG 295
G ED I +WDI + + H + + L + +SG D+ + L++++
Sbjct: 364 GVEDQQIRIWDIAQKRV-YRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQ 422
Query: 296 SCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAV 355
++ + G++ PD + A D+ +RI+ G+ + L H + +V
Sbjct: 423 KLILHTD-----DGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSV 476
Query: 356 SFSSDCKLMASASEDSTVALWEL 378
+FS D K + S S D+T+ LWEL
Sbjct: 477 AFSPDGKYLVSGSLDNTIKLWEL 499
Score = 126 (49.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 37/141 (26%), Positives = 73/141 (51%)
Query: 246 DIRNPGIPLTAMKVH-LE--PVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCV-IK 300
++ N P++ +H LE V+C + S +G ++ G ++ +++N++ TG + +
Sbjct: 280 NVPNKEPPISVQLLHTLEHTSVICY-VRFSADGKFLATGCNRAAMVFNVE--TGKLITLL 336
Query: 301 KEINLERPG---ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSF 357
+E + +R G + + PD K AT D+++RI++ + +L H ++ F
Sbjct: 337 QEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDF 396
Query: 358 SSDCKLMASASEDSTVALWEL 378
S D K + S S D TV LW++
Sbjct: 397 SKDGKTLVSGSGDRTVCLWDV 417
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 116 (45.9 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 39/143 (27%), Positives = 65/143 (45%)
Query: 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 294
+G + +I +WD G+ T + H VL L SG D I L+ D +
Sbjct: 172 SGSAEKTIKLWDSATCGLKHT-LGGHSNWVLPLVFSPDGRLLASGSNDATIKLW--DPPS 228
Query: 295 GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA 354
GS +K + I + P+ ++ A+ D +++++ GS LK H +
Sbjct: 229 GS--LKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLS 286
Query: 355 VSFSSDCKLMASASEDSTVALWE 377
V FS D +L+ S S D+T+ LW+
Sbjct: 287 VVFSPDSQLLESGSGDNTIKLWD 309
Score = 113 (44.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 48/217 (22%), Positives = 92/217 (42%)
Query: 173 MAVAGEQLSEVEIWDLNTA--ERCTRLHQNSCGG---SPNFSSKGRGMCMAVQAYLPSKS 227
+ +G + +++WD + ++ H +S SPN G S S
Sbjct: 55 LLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSAS 114
Query: 228 QGFVNVLAGYEDG--SILV---WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGG 280
+ + G+ D S+ + NP I + LS+ S +G + SG
Sbjct: 115 DSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGS 174
Query: 281 ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS 340
A++ I L+ D +T C +K + + PD ++ A+ D +++++ GS
Sbjct: 175 AEKTIKLW--DSAT--CGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGS 230
Query: 341 ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
L+ H +++FS + +L+AS S D+T+ LW+
Sbjct: 231 LKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWD 267
Score = 70 (29.7 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH + V F +L +G+ +++WD + HS++ + SVA P+
Sbjct: 37 LEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSS--VQSVAFSPN 94
Query: 74 IGLNKVISQGRDGTVKCWDIENGGL 98
L + S D T+K W+ + L
Sbjct: 95 GQL--LASGSSDTTIKLWNSASDSL 117
Score = 67 (28.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 22/80 (27%), Positives = 35/80 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIW----DTVQHRTVS-SSWVHSAAHGIVSV 68
L GH +SV V F +L +G++ +++W D+++H S V S A
Sbjct: 79 LEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQ 138
Query: 69 ATGPSIGLNKVISQGRDGTV 88
P+IG K +G V
Sbjct: 139 LWNPAIGSLKHTIEGHSDWV 158
Score = 50 (22.7 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 47 TVQHRTVSSSW------VHSAAHGIVSVATGPSIGLNKVISQG-RDGTVKCWDIENGGL 98
T+Q V +W + + I +V P ++++ G D T+K WD +GGL
Sbjct: 20 TLQRPKVEDNWGPELQTLEGHSDWIETVTFSPD---GRLLASGSNDTTIKLWDPASGGL 75
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 130 (50.8 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 38/149 (25%), Positives = 66/149 (44%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G D ++ +WD+ N G+ H + VL ++ +SG D+ I L+N +
Sbjct: 85 LSGSWDKTLRLWDL-NQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWN---T 140
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKY--HH 349
C + +S P ++ + +AGWD+ V+++N G+ + H
Sbjct: 141 LAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNL--GNCRLKTNHIGHT 198
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 199 GYVNTVTVSPDGSLCASGGKDGQAMLWDL 227
Score = 50 (22.7 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95
+ +AT V+S RD T+ WD+++
Sbjct: 19 VTQIATYTRNDKTTVLSSSRDKTILVWDVDS 49
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 130 (50.8 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 38/149 (25%), Positives = 66/149 (44%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G D ++ +WD+ N G+ H + VL ++ +SG D+ I L+N +
Sbjct: 85 LSGSWDKTLRLWDL-NQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWN---T 140
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGSALAILKY--HH 349
C + +S P ++ + +AGWD+ V+++N G+ + H
Sbjct: 141 LAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNL--GNCRLKTNHIGHT 198
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D LW+L
Sbjct: 199 GYVNTVTVSPDGSLCASGGKDGQAMLWDL 227
Score = 50 (22.7 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95
+ +AT V+S RD T+ WD+++
Sbjct: 19 VTQIATYTRNDKTTVLSSSRDKTILVWDVDS 49
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 124 (48.7 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 37/143 (25%), Positives = 67/143 (46%)
Query: 238 EDGSILVWDIRNPG-IPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG 295
+D SI VWD+ +P I L + V H V + DE +S D+ I ++ ST
Sbjct: 308 KDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYI--VSASGDRTIKVW----STS 361
Query: 296 SCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAV 355
+C + +N + GI+ R ++ + D +R+++ G+ L +L+ H +
Sbjct: 362 TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCI 419
Query: 356 SFSSDCKLMASASEDSTVALWEL 378
F D K + S + D + +W+L
Sbjct: 420 RF--DTKRIVSGAYDGKIKVWDL 440
Score = 106 (42.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/147 (21%), Positives = 69/147 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLD 291
+++G D ++ VWD+ N G + + H E VL L + NG ++ D+ I ++++
Sbjct: 263 IISGSSDSTVRVWDV-NTGEMVNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMT 318
Query: 292 HSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
S +++ + R ++ D K +A DR +++++ + L H
Sbjct: 319 -SPSEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG 375
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
+ + +L+ S S D+++ LW++
Sbjct: 376 IACLQYRD--RLVVSGSSDNSIRLWDI 400
Score = 63 (27.2 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 17/83 (20%), Positives = 38/83 (45%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
V L GH SV +C ++ +G++ +R+WD V++ H A ++ +
Sbjct: 243 VKTLMGHTGSV--LCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA--VLHLRF 298
Query: 71 GPSIGLNKVISQGRDGTVKCWDI 93
+ +++ +D ++ WD+
Sbjct: 299 NNGM----MVTCSKDRSIAVWDM 317
Score = 61 (26.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 15/72 (20%), Positives = 30/72 (41%)
Query: 25 CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84
C + +G ++IWD + V + H+ + ++ + + +IS
Sbjct: 215 CLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGS--VLCLQYDDKV----IISGSS 268
Query: 85 DGTVKCWDIENG 96
D TV+ WD+ G
Sbjct: 269 DSTVRVWDVNTG 280
Score = 52 (23.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 175 VAGEQLSEVEIWDLNTAERC-TRLH 198
++G S V +WD+NT E T +H
Sbjct: 264 ISGSSDSTVRVWDVNTGEMVNTLIH 288
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 108 (43.1 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 29/131 (22%), Positives = 57/131 (43%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGG---ISGGADQKIVLYNLDHSTGSCVIKKEINLER-- 307
P + H + +S+ +S N ++G D I + + ++ S V E
Sbjct: 419 PFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHD 478
Query: 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASA 367
I+ + P+ + ATA +D+ +++ G + +LK H ++F KL+ +
Sbjct: 479 KDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTG 538
Query: 368 SEDSTVALWEL 378
S D T+ +W L
Sbjct: 539 SGDKTIKVWSL 549
Score = 85 (35.0 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 39/181 (21%), Positives = 78/181 (43%)
Query: 14 LRGHRASVTDVCFHQTKPI----LFAGTTGGELRIWDTVQHRTVSSSWVHSAA-HGIVSV 68
L+GH ++ + FH L +G T G ++IWD V+ R + + H+ A G+
Sbjct: 139 LKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFD 198
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ 128
G + IS GRD V ++ +N + + + + F L ++ +
Sbjct: 199 QDG-----DLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGS 253
Query: 129 ANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPK-YMAVAGEQLSEVEIWD 187
N K ++ + GE + + ++N IID + Y+ ++ + L E+++ +
Sbjct: 254 ENVLK-IWDIKSGEMIGRSPI--PLKTNEELLIIDVIKLYNNNLYLVISDQTLIELDLQE 310
Query: 188 L 188
L
Sbjct: 311 L 311
Score = 81 (33.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/101 (22%), Positives = 46/101 (45%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA--AHGIVSV 68
+ L+ H +V V F Q + +G + I++T +T+++ ++ A G VS+
Sbjct: 182 IHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSL 241
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTN 109
+ G + +K WDI++G + + +KTN
Sbjct: 242 IDDRQY----FYTGGSENVLKIWDIKSGEMIGRSPIPLKTN 278
Score = 80 (33.2 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 315 IRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVA 374
+ P+ + A A +RI + K L + + H NAV S+D K +A+AS+D+
Sbjct: 347 VGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEAR 406
Query: 375 LW 376
LW
Sbjct: 407 LW 408
Score = 56 (24.8 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 83 GRDGTVKCWDIENG 96
G DG + WDIENG
Sbjct: 120 GSDGVITVWDIENG 133
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 108 (43.1 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 29/131 (22%), Positives = 57/131 (43%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGG---ISGGADQKIVLYNLDHSTGSCVIKKEINLER-- 307
P + H + +S+ +S N ++G D I + + ++ S V E
Sbjct: 419 PFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHD 478
Query: 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASA 367
I+ + P+ + ATA +D+ +++ G + +LK H ++F KL+ +
Sbjct: 479 KDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTG 538
Query: 368 SEDSTVALWEL 378
S D T+ +W L
Sbjct: 539 SGDKTIKVWSL 549
Score = 85 (35.0 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 39/181 (21%), Positives = 78/181 (43%)
Query: 14 LRGHRASVTDVCFHQTKPI----LFAGTTGGELRIWDTVQHRTVSSSWVHSAA-HGIVSV 68
L+GH ++ + FH L +G T G ++IWD V+ R + + H+ A G+
Sbjct: 139 LKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFD 198
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ 128
G + IS GRD V ++ +N + + + + F L ++ +
Sbjct: 199 QDG-----DLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGS 253
Query: 129 ANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPK-YMAVAGEQLSEVEIWD 187
N K ++ + GE + + ++N IID + Y+ ++ + L E+++ +
Sbjct: 254 ENVLK-IWDIKSGEMIGRSPI--PLKTNEELLIIDVIKLYNNNLYLVISDQTLIELDLQE 310
Query: 188 L 188
L
Sbjct: 311 L 311
Score = 81 (33.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/101 (22%), Positives = 46/101 (45%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA--AHGIVSV 68
+ L+ H +V V F Q + +G + I++T +T+++ ++ A G VS+
Sbjct: 182 IHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSL 241
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTN 109
+ G + +K WDI++G + + +KTN
Sbjct: 242 IDDRQY----FYTGGSENVLKIWDIKSGEMIGRSPIPLKTN 278
Score = 80 (33.2 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 315 IRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVA 374
+ P+ + A A +RI + K L + + H NAV S+D K +A+AS+D+
Sbjct: 347 VGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEAR 406
Query: 375 LW 376
LW
Sbjct: 407 LW 408
Score = 56 (24.8 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 83 GRDGTVKCWDIENG 96
G DG + WDIENG
Sbjct: 120 GSDGVITVWDIENG 133
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 117 (46.2 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 45/192 (23%), Positives = 78/192 (40%)
Query: 201 SCGGSPNFSS----KGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL---------VWDI 247
+CGG N S K R + V LP + G+++ +DG I+ +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHT-GYLSCCRFLDDGQIITSSGDTTCALWDI 171
Query: 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 307
G T H V+ LS+ +SG D L+++ G C ++
Sbjct: 172 ET-GQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDI--RDGMC--RQSFTGHI 226
Query: 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN--AVSFSSDCKLMA 365
I+ S P AT D R+++ R L + + + C +V+FS +L+
Sbjct: 227 SDINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLL 286
Query: 366 SASEDSTVALWE 377
+ +D ++W+
Sbjct: 287 AGYDDFNCSVWD 298
Score = 65 (27.9 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV----QHRT-VSSSWVHSAAHGIVS- 67
LRGH A + + + +L + + G+L IWD+ H + SSWV + A+
Sbjct: 51 LRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGN 110
Query: 68 -VATGPSIGLNKVIS----QGRDGTVK 89
VA G GL+ + S + R+G V+
Sbjct: 111 YVACG---GLDNICSIYNLKTREGNVR 134
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 117 (46.2 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 45/192 (23%), Positives = 78/192 (40%)
Query: 201 SCGGSPNFSS----KGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL---------VWDI 247
+CGG N S K R + V LP + G+++ +DG I+ +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHT-GYLSCCRFLDDGQIITSSGDTTCALWDI 171
Query: 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 307
G T H V+ LS+ +SG D L+++ G C ++
Sbjct: 172 ET-GQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDI--RDGMC--RQSFTGHI 226
Query: 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN--AVSFSSDCKLMA 365
I+ S P AT D R+++ R L + + + C +V+FS +L+
Sbjct: 227 SDINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLL 286
Query: 366 SASEDSTVALWE 377
+ +D ++W+
Sbjct: 287 AGYDDFNCSVWD 298
Score = 65 (27.9 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV----QHRT-VSSSWVHSAAHGIVS- 67
LRGH A + + + +L + + G+L IWD+ H + SSWV + A+
Sbjct: 51 LRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGN 110
Query: 68 -VATGPSIGLNKVIS----QGRDGTVK 89
VA G GL+ + S + R+G V+
Sbjct: 111 YVACG---GLDNICSIYNLKTREGNVR 134
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 110 (43.8 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 239 DGSILVWDI---RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG 295
DG+I WD+ RN +V CL++D S I GG+ +Y TG
Sbjct: 402 DGTIRAWDLIRFRNFKTFTATSRVQFN---CLAVDPS-GEVIVGGSQDTFEIYVWSVQTG 457
Query: 296 SCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN-YRKGSALAILKYHH-ATCN 353
++ E P IS + ++ I A+A WD+ +RI+N + + + ++ A C
Sbjct: 458 Q-LLDSLTGHEGP-ISCLTFGKENSILASASWDKTIRIWNIFSRNQTVEPIEIQSDALC- 514
Query: 354 AVSFSSDCKLMASASEDSTVALWEL 378
++ DCK +A ++ D V ++++
Sbjct: 515 -LTMRPDCKELAVSTLDGHVTIFDI 538
Score = 107 (42.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 35/164 (21%), Positives = 66/164 (40%)
Query: 217 MAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG 276
M Y P S+ ++ G +DG I +WD+R+ G L H V + +
Sbjct: 342 MNTLCYSPDGSR----LVTGSDDGKIKIWDVRS-GFCLMTFTEHTSAVTQVQFAKRGQVL 396
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR-RVRIYN 335
S D I ++L K R + ++ P ++ D + +++
Sbjct: 397 FSSSLDGTIRAWDLIRFRN---FKTFTATSRVQFNCLAVDPSGEVIVGGSQDTFEIYVWS 453
Query: 336 YRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379
+ G L L H + ++F + ++ASAS D T+ +W ++
Sbjct: 454 VQTGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIWNIF 497
Score = 84 (34.6 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI 74
+GH S+ +C+ L G+ G+++IWD + + H++A V A +
Sbjct: 336 QGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQV 395
Query: 75 GLNKVISQGRDGTVKCWDI 93
+ S DGT++ WD+
Sbjct: 396 ----LFSSSLDGTIRAWDL 410
Score = 59 (25.8 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 25 CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV-ATG 71
CFH +L G T GE R+++ + S + A V++ TG
Sbjct: 261 CFHPQSKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQNAVNTVNINKTG 308
Score = 49 (22.3 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 77 NKVISQGRDGTVKCWDIENG 96
+++++ DG +K WD+ +G
Sbjct: 352 SRLVTGSDDGKIKIWDVRSG 371
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 110 (43.8 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 239 DGSILVWDI---RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG 295
DG+I WD+ RN +V CL++D S I GG+ +Y TG
Sbjct: 402 DGTIRAWDLIRFRNFKTFTATSRVQFN---CLAVDPS-GEVIVGGSQDTFEIYVWSVQTG 457
Query: 296 SCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN-YRKGSALAILKYHH-ATCN 353
++ E P IS + ++ I A+A WD+ +RI+N + + + ++ A C
Sbjct: 458 Q-LLDSLTGHEGP-ISCLTFGKENSILASASWDKTIRIWNIFSRNQTVEPIEIQSDALC- 514
Query: 354 AVSFSSDCKLMASASEDSTVALWEL 378
++ DCK +A ++ D V ++++
Sbjct: 515 -LTMRPDCKELAVSTLDGHVTIFDI 538
Score = 107 (42.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 35/164 (21%), Positives = 66/164 (40%)
Query: 217 MAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG 276
M Y P S+ ++ G +DG I +WD+R+ G L H V + +
Sbjct: 342 MNTLCYSPDGSR----LVTGSDDGKIKIWDVRS-GFCLMTFTEHTSAVTQVQFAKRGQVL 396
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR-RVRIYN 335
S D I ++L K R + ++ P ++ D + +++
Sbjct: 397 FSSSLDGTIRAWDLIRFRN---FKTFTATSRVQFNCLAVDPSGEVIVGGSQDTFEIYVWS 453
Query: 336 YRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379
+ G L L H + ++F + ++ASAS D T+ +W ++
Sbjct: 454 VQTGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIWNIF 497
Score = 84 (34.6 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI 74
+GH S+ +C+ L G+ G+++IWD + + H++A V A +
Sbjct: 336 QGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQV 395
Query: 75 GLNKVISQGRDGTVKCWDI 93
+ S DGT++ WD+
Sbjct: 396 ----LFSSSLDGTIRAWDL 410
Score = 59 (25.8 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 25 CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV-ATG 71
CFH +L G T GE R+++ + S + A V++ TG
Sbjct: 261 CFHPQSKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQNAVNTVNINKTG 308
Score = 49 (22.3 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 77 NKVISQGRDGTVKCWDIENG 96
+++++ DG +K WD+ +G
Sbjct: 352 SRLVTGSDDGKIKIWDVRSG 371
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 99 (39.9 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L G D + +WD N G + + H + +L D + + AD +++
Sbjct: 276 ILTGSMDKTCKLWDAVN-GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSA-- 332
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+T CV K E + IS S P T D+ RI++ + G L +L+ H
Sbjct: 333 ATRECVTKLEGH--EGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEI 390
Query: 353 NAVSFSSDCKLMASASEDSTVALW 376
+ +F+ ++ + S+D+T +W
Sbjct: 391 FSCAFNYKGDIIITGSKDNTCRIW 414
Score = 92 (37.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 30/145 (20%), Positives = 59/145 (40%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
++ G D ++ VW+ + G + + H + + C+ ++G D+ L+ D
Sbjct: 234 IITGSFDHTVTVWEA-DTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLW--DA 290
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
G CV + I + K+ ATA D RI++ + L+ H
Sbjct: 291 VNGKCVAT--LTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEI 348
Query: 353 NAVSFSSDCKLMASASEDSTVALWE 377
+ +SF+ + + S D T +W+
Sbjct: 349 SKISFNPQGNRLLTGSSDKTARIWD 373
Score = 90 (36.7 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 31/145 (21%), Positives = 55/145 (37%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+ G D + +W + G + H ++CLS + +G D L+++
Sbjct: 150 IATGSFDKTCKLWSVET-GKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ- 207
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+G V + I S T +D V ++ G + L H A
Sbjct: 208 -SGEEVFT--LTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEI 264
Query: 353 NAVSFSSDCKLMASASEDSTVALWE 377
++ F+ DC L+ + S D T LW+
Sbjct: 265 SSAVFNWDCSLILTGSMDKTCKLWD 289
Score = 87 (35.7 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI 74
RGH A + + F+ ++ G+ ++WD V + HSA I+S++ S
Sbjct: 174 RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAE--IISLSFNTS- 230
Query: 75 GLNKVISQGRDGTVKCWDIENG 96
G N++I+ D TV W+ + G
Sbjct: 231 G-NRIITGSFDHTVTVWEADTG 251
Score = 78 (32.5 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VLR H +T+V +++ G+ ++WDT + + H + ++A
Sbjct: 87 VLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNV--VYAIAFNN 144
Query: 73 SIGLNKVISQGRDGTVKCWDIENG 96
G +K+ + D T K W +E G
Sbjct: 145 PYG-DKIATGSFDKTCKLWSVETG 167
Score = 69 (29.3 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/88 (25%), Positives = 36/88 (40%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
+ V L GH A + + F+ + + G+ + +W+ R V + H A I S
Sbjct: 210 EEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAE--ISSA 267
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENG 96
L +++ D T K WD NG
Sbjct: 268 VFNWDCSL--ILTGSMDKTCKLWDAVNG 293
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 111 (44.1 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 32/150 (21%), Positives = 71/150 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
++ G D ++ VWD+ + G L + H V C+ D + +SGG D + ++N H
Sbjct: 351 LVTGSRDTTLRVWDVES-GRHLATLHGHHAAVRCVQFDGTTV--VSGGYDFTVKIWNA-H 406
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK--GS-ALAILKYHH 349
TG C+ + + + + I + D +R++++ + G +A+L+ H
Sbjct: 407 -TGRCI--RTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHT 463
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWELY 379
+ + + + ++ S + DS V +W+++
Sbjct: 464 SLTSGMQLRGN--ILVSCNADSHVRVWDIH 491
Score = 102 (41.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 32/147 (21%), Positives = 69/147 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D ++ +W+ G + + H V L + + SG D I +++
Sbjct: 391 VVSGGYDFTVKIWNAHT-GRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTR 449
Query: 293 STGS-CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G CV + + SG +R + ++ A D VR+++ +G+ + +L H +
Sbjct: 450 PEGQECVALLQGHTSLT--SGMQLRGNILVSCNA--DSHVRVWDIHEGTCVHMLSGHRSA 505
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
++ + ++A++S+D TV LW++
Sbjct: 506 ITSLQWFGR-NMVATSSDDGTVKLWDI 531
Score = 98 (39.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 30/149 (20%), Positives = 70/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D ++ VW + G L ++ H V C+++ S ++G D + +++++
Sbjct: 311 IVSGSTDRTVKVWSTVD-GSLLHTLQGHTSTVRCMAMAGSIL--VTGSRDTTLRVWDVE- 366
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+G + L + ++ D + G+D V+I+N G + L H+
Sbjct: 367 -SG----RHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRV 421
Query: 353 NAVSFSSDCKLMASASEDSTVALWELYPP 381
++ F S+ ++ S S D+++ +W+ P
Sbjct: 422 YSLLFESERSIVCSGSLDTSIRVWDFTRP 450
Score = 86 (35.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 27/83 (32%), Positives = 38/83 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH ++V C IL G+ LR+WD R +++ H AA V G +
Sbjct: 334 LQGHTSTVR--CMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF-DGTT 390
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
V+S G D TVK W+ G
Sbjct: 391 -----VVSGGYDFTVKIWNAHTG 408
Score = 78 (32.5 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH V Q + +G+T +++W TV + + H++ + +A S
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTST--VRCMAMAGS 349
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
I +++ RD T++ WD+E+G
Sbjct: 350 I----LVTGSRDTTLRVWDVESG 368
Score = 69 (29.3 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 24/87 (27%), Positives = 36/87 (41%)
Query: 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
AVLRGH V C +L G+ L++W + + + H+ G V +
Sbjct: 249 AVLRGHEDHVI-TCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHT---GGVWTSQI 304
Query: 72 PSIGLNKVISQGRDGTVKCWDIENGGL 98
G ++S D TVK W +G L
Sbjct: 305 SQCG-RYIVSGSTDRTVKVWSTVDGSL 330
Score = 40 (19.1 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRLH 198
V G + + + +WD+ + LH
Sbjct: 352 VTGSRDTTLRVWDVESGRHLATLH 375
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 111 (44.1 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 32/150 (21%), Positives = 71/150 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
++ G D ++ VWD+ + G L + H V C+ D + +SGG D + ++N H
Sbjct: 351 LVTGSRDTTLRVWDVES-GRHLATLHGHHAAVRCVQFDGTTV--VSGGYDFTVKIWNA-H 406
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK--GS-ALAILKYHH 349
TG C+ + + + + I + D +R++++ + G +A+L+ H
Sbjct: 407 -TGRCI--RTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHT 463
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWELY 379
+ + + + ++ S + DS V +W+++
Sbjct: 464 SLTSGMQLRGN--ILVSCNADSHVRVWDIH 491
Score = 102 (41.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 32/147 (21%), Positives = 69/147 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D ++ +W+ G + + H V L + + SG D I +++
Sbjct: 391 VVSGGYDFTVKIWNAHT-GRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTR 449
Query: 293 STGS-CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G CV + + SG +R + ++ A D VR+++ +G+ + +L H +
Sbjct: 450 PEGQECVALLQGHTSLT--SGMQLRGNILVSCNA--DSHVRVWDIHEGTCVHMLSGHRSA 505
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
++ + ++A++S+D TV LW++
Sbjct: 506 ITSLQWFGR-NMVATSSDDGTVKLWDI 531
Score = 98 (39.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 30/149 (20%), Positives = 70/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D ++ VW + G L ++ H V C+++ S ++G D + +++++
Sbjct: 311 IVSGSTDRTVKVWSTVD-GSLLHTLQGHTSTVRCMAMAGSIL--VTGSRDTTLRVWDVE- 366
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+G + L + ++ D + G+D V+I+N G + L H+
Sbjct: 367 -SG----RHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRV 421
Query: 353 NAVSFSSDCKLMASASEDSTVALWELYPP 381
++ F S+ ++ S S D+++ +W+ P
Sbjct: 422 YSLLFESERSIVCSGSLDTSIRVWDFTRP 450
Score = 86 (35.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 27/83 (32%), Positives = 38/83 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH ++V C IL G+ LR+WD R +++ H AA V G +
Sbjct: 334 LQGHTSTVR--CMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF-DGTT 390
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
V+S G D TVK W+ G
Sbjct: 391 -----VVSGGYDFTVKIWNAHTG 408
Score = 78 (32.5 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH V Q + +G+T +++W TV + + H++ + +A S
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTST--VRCMAMAGS 349
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
I +++ RD T++ WD+E+G
Sbjct: 350 I----LVTGSRDTTLRVWDVESG 368
Score = 69 (29.3 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 24/87 (27%), Positives = 36/87 (41%)
Query: 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
AVLRGH V C +L G+ L++W + + + H+ G V +
Sbjct: 249 AVLRGHEDHVI-TCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHT---GGVWTSQI 304
Query: 72 PSIGLNKVISQGRDGTVKCWDIENGGL 98
G ++S D TVK W +G L
Sbjct: 305 SQCG-RYIVSGSTDRTVKVWSTVDGSL 330
Score = 40 (19.1 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRLH 198
V G + + + +WD+ + LH
Sbjct: 352 VTGSRDTTLRVWDVESGRHLATLH 375
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 37/129 (28%), Positives = 64/129 (49%)
Query: 255 TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTS 314
++M H E VL + G +S G D + ++++ ST + +K N + +
Sbjct: 134 SSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNW----VLQVA 189
Query: 315 IRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYHHATCNAVSF-----SSDCKLMASAS 368
PDSK ATAG + +RI+ + G L + LK H +S+ + C +AS+S
Sbjct: 190 WSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSS 249
Query: 369 EDSTVALWE 377
+DST+ +W+
Sbjct: 250 KDSTIRIWD 258
Score = 114 (45.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 27/102 (26%), Positives = 54/102 (52%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
ISG D ++++N S I + + + I+ S PD + A+A +D+ +++++
Sbjct: 367 ISGSDDFTVIMWN--PSVTKTSISR-LTGHQQLINLVSFSPDGRYFASASFDKSIKLWDG 423
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ G L + H V +SSD + + S S+DST+ +W++
Sbjct: 424 QSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDI 465
Score = 73 (30.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 10 PVAVLRGHRASVTDVCFH-QTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
P L+GH V V + +K I AG G ++RIW + + S+ + I +
Sbjct: 174 PTHTLKGHTNWVLQVAWSPDSKKIATAGMEG-DIRIWCPQTGKQLGST-LKGHTKFITGL 231
Query: 69 ATGPSIGLN----KVISQGRDGTVKCWDIEN 95
+ P LN ++ S +D T++ WD E+
Sbjct: 232 SWEP-FHLNPKCVRLASSSKDSTIRIWDTES 261
Score = 54 (24.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 51 RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIK 107
R SS H+ A +++ A P G +S G D TV+ WDI +S P+ T+K
Sbjct: 131 RCASSMSGHTEA--VLNCAFSPD-GKG-FVSVGGDTTVRIWDI----YTSTPTHTLK 179
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 101 (40.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 300 KKEINLERPGISG-TSIRPDSKIA-ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSF 357
+KEI + +G T+ P+S I A+A +D VR+++ +G L+ H +V+F
Sbjct: 397 RKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAF 456
Query: 358 SSDCKLMASASEDSTVALW 376
S D K +AS S D V +W
Sbjct: 457 SPDGKYLASGSFDKCVHIW 475
Score = 87 (35.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/104 (25%), Positives = 48/104 (46%)
Query: 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW------VHS 60
PP+ VLRGH + V ++ +L +G+ RIW+ ++ + +S+ +
Sbjct: 164 PPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIRE 223
Query: 61 AAHGIVSVATGPSIGLNK---VISQGR-DGTVKCWDIENGGLSS 100
H + S S+ N +++ G DG + W ENG L+S
Sbjct: 224 GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-ENGNLAS 266
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 113 (44.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 39/155 (25%), Positives = 63/155 (40%)
Query: 225 SKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQK 284
S Q FV +D ++ VW L ++ H+ V C +S D+
Sbjct: 113 SDGQSFVTAS---DDKTVKVWATHRQKF-LFSLSQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 285 IVLYNLDHSTGSCVIKKEINLERPG-ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA 343
+ L+ D S+ CV E G ++ P A AG D V++++ R L
Sbjct: 169 VKLW--DKSSRECV---HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 223
Query: 344 ILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ H A N +SF + +AS DST+ + +L
Sbjct: 224 HYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 258
Score = 71 (30.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/104 (29%), Positives = 42/104 (40%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH--GIVSVATGP 72
+GHR +VT V F L +G+ L +W H S H + V P
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVW----HMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 73 SIGLNKVISQGRDGTVKCWDIEN--GGLSSNPSLTIKTNSYHFC 114
S L + S RD TV+ W + N G + + T S HFC
Sbjct: 72 SGHL--LASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC 112
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 122 (48.0 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 42/154 (27%), Positives = 68/154 (44%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG + +WD+ + G+ H + VL ++ +S D+ I L+N +
Sbjct: 91 LSGSWDGELRLWDL-STGVTTRRFVGHDKDVLSVAFSVDNRQIVSASRDRTIKLWN---T 146
Query: 294 TGSCVIKKEINLERPGISG-----TSIR--PDS--KIAATAGWDRRVRIYNYRKGSALAI 344
G C K I + G G + +R P++ + WDR V+++N
Sbjct: 147 LGEC--KYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLRCN 204
Query: 345 LKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
L+ H NAV+ S D L AS +D LW+L
Sbjct: 205 LEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDL 238
Score = 94 (38.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 26/83 (31%), Positives = 37/83 (44%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P L GH V DV +G+ GELR+WD T H ++SVA
Sbjct: 67 PFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDK--DVLSVA 124
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
S+ +++S RD T+K W+
Sbjct: 125 F--SVDNRQIVSASRDRTIKLWN 145
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/108 (25%), Positives = 55/108 (50%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPG--ISGTSIRPDSKIAATAGWDRRVRIY 334
+SG D+ + ++NL + C K NLE G ++ ++ PD + A+ G D ++
Sbjct: 183 VSGSWDRTVKVWNLTN----C--KLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLW 236
Query: 335 NYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPPH 382
+ +G L L + +++ FS + + +A++DS + +W+L H
Sbjct: 237 DLAEGKRLYSLDAG-SIIHSLCFSPNRYWLCAATQDS-IKIWDLESKH 282
Score = 53 (23.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 21/95 (22%), Positives = 37/95 (38%)
Query: 13 VLRGHRASVTDVCFH-QTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGI-VSVAT 70
V+ GH VT + P + + + L +WD ++ +G+ T
Sbjct: 13 VMHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLT 72
Query: 71 GPSIGLNKVI--SQGR-------DGTVKCWDIENG 96
G S + V+ S G+ DG ++ WD+ G
Sbjct: 73 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTG 107
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/144 (26%), Positives = 71/144 (49%)
Query: 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 294
+G D + +W PL HL V C+ + N +G D+ + L++
Sbjct: 401 SGSHDRTARLWSFDRT-YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-- 457
Query: 295 GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA 354
G+ V + R + S P+ K A+AG D+R+++++ G+ L+ H + +
Sbjct: 458 GNSV--RLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITS 515
Query: 355 VSFSSDCKLMASASEDSTVALWEL 378
++FS D L+ASAS D++V +W++
Sbjct: 516 LAFSPDSGLIASASMDNSVRVWDI 539
>ASPGD|ASPL0000054401 [details] [associations]
symbol:AN0305 species:162425 "Emericella nidulans"
[GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000006 InterPro:IPR007148 Pfam:PF04003
HOGENOM:HOG000212524 KO:K14556 OMA:SIFAHDD OrthoDB:EOG4N07P3
RefSeq:XP_657909.1 ProteinModelPortal:Q5BGM5 STRING:Q5BGM5
EnsemblFungi:CADANIAT00002409 GeneID:2876084 KEGG:ani:AN0305.2
Uniprot:Q5BGM5
Length = 963
Score = 114 (45.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 55/217 (25%), Positives = 94/217 (43%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL 234
+A +++W++ T + C R + CG + +C A+LP G V+
Sbjct: 440 LASASNGSLKVWNVRT-QNCLRTLE--CGYA---------LC---SAFLP----GDKIVV 480
Query: 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL---- 290
G +DG + ++DI + + L +K H PV L + +SG AD+ +N
Sbjct: 481 VGNKDGELEIFDIASSTL-LDTIKAHDGPVWSLQVHPDGKSLVSGSADKSAKFWNFQVVQ 539
Query: 291 DHSTGSCVIKKEINLERPG---ISGT--SIR--PDSKIAATAGWDRRVRIYNYRKGSALA 343
+ G+ + L +S S+R PD+++ A A D V+++ + L
Sbjct: 540 EEIPGTKRTTPRLRLVHTRTLKVSDDILSVRFSPDARLLAVALLDNTVKVF-FNDSLKLF 598
Query: 344 ILKYHHA--TCNAVSFSSDCKLMASASEDSTVALWEL 378
+ Y H N + S D KL+ + S D TV LW L
Sbjct: 599 LNLYGHKLPVLN-MDISWDSKLIVTCSADKTVRLWGL 634
Score = 79 (32.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/108 (30%), Positives = 49/108 (45%)
Query: 18 RASVTDVCFHQTKPILFA-GTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGL 76
RA VT + +T +FA G G +R+WD+ + S H +A I +A + G+
Sbjct: 72 RAQVTVITQSKTDEDIFAVGYEDGSIRLWDSRTETVMISFNGHKSA--ITQLAFD-NAGV 128
Query: 77 NKVISQGRDGTVKCWD-IENGGLSSNPSLTIKTNSYHFC--KLSLVKE 121
++ S RD + WD I GL T + S HF L L+ E
Sbjct: 129 -RLASGSRDTNIILWDLISEVGLFKLRGHTDQITSLHFLVPTLELLNE 175
Score = 67 (28.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 19/87 (21%), Positives = 42/87 (48%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS----AAHGIV-SVAT 70
GH++++T + F L +G+ + +WD + + H+ + H +V ++
Sbjct: 113 GHKSAITQLAFDNAGVRLASGSRDTNIILWDLISEVGLFKLRGHTDQITSLHFLVPTLEL 172
Query: 71 GPSIGLNK----VISQGRDGTVKCWDI 93
GL++ +I+ G+D +K WD+
Sbjct: 173 LNEAGLSEHAGFLITTGKDALIKVWDL 199
Score = 65 (27.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 26/98 (26%), Positives = 41/98 (41%)
Query: 14 LRGHRASVTDVCFH-QTKPIL-------FAG---TTGGE--LRIWDTVQHRTVSSSWVHS 60
LRGH +T + F T +L AG TTG + +++WD + + S
Sbjct: 153 LRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDALIKVWDLASQHCIETHIAQS 212
Query: 61 AAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98
S+ P + I+ G DG +K W I+ G +
Sbjct: 213 NGE-CWSLGLAPD--QSGCITGGNDGELKAWSIDEGAM 247
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 119 (46.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 208 FSSKGRGMCMAVQAYLPSKSQGFVN----VLAGYEDGSILVWDIRNPGIPLTAMKVHLEP 263
F ++ +G Q P S F + ++ G D I VWDIRN PL + H +
Sbjct: 175 FDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDT 234
Query: 264 VLCLSIDESCNGGISGGADQKIVLYNL-DHSTGSCVIKK----EINLERPGI-SGTSIRP 317
+ S+ + +S D ++++ ++ + IK + N E+ I S SI
Sbjct: 235 ITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSI-- 292
Query: 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
D + DR+V I++ L H T N V+F + ++AS S D T+ L E
Sbjct: 293 DGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGE 352
Query: 378 LYP 380
+ P
Sbjct: 353 IKP 355
Score = 62 (26.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/86 (19%), Positives = 38/86 (44%)
Query: 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
+VL+GH+ ++ ++ + ++ T + +WD+ + + HS G+V+
Sbjct: 99 SVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHS---GVVNSCCP 155
Query: 72 PSIGLNKVISQGRDGTVKCWDIENGG 97
G V S D + + +D + G
Sbjct: 156 ARRGPPLVASGSDDRSARIFDTRSKG 181
Score = 56 (24.8 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 19/89 (21%), Positives = 38/89 (42%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P+ L GH+ + F+ L +G + E+ +W+ V ++ S + I+ +
Sbjct: 54 PIMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWN-VYGECINYSVLKGHKGTILELH 112
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENGGL 98
S N++ + D ++ WD G L
Sbjct: 113 W--STDSNEIYTACTDKSIGVWDSNKGEL 139
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 137 (53.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312
PL HL V C + N +G AD+ + L+ D G+CV + + I
Sbjct: 379 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW--DVLNGNCV--RIFTGHKGPIHS 434
Query: 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST 372
+ P+ + AT D RV +++ G + LK H T ++ FS D +++AS S D+T
Sbjct: 435 LTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 494
Query: 373 VALWE 377
V LW+
Sbjct: 495 VRLWD 499
Score = 133 (51.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L+ EDG++ +W ++ L K H PV +SGG D+ L+ DH
Sbjct: 318 LLSSSEDGTVRLWSLQTFTC-LVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH 376
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ + ++ T P+S AT DR VR+++ G+ + I H
Sbjct: 377 YQPLRIFAGHL----ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPI 432
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
++++FS + + +A+ + D V LW++
Sbjct: 433 HSLTFSPNGRFLATGATDGRVLLWDI 458
Score = 48 (22.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 77 NKVISQGRDGTVKCWDIE 94
N ++S DGTV+ W ++
Sbjct: 316 NYLLSSSEDGTVRLWSLQ 333
Score = 47 (21.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIW 45
+L GH V F + L + + G +R+W
Sbjct: 298 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW 330
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 120 (47.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 47/192 (24%), Positives = 79/192 (41%)
Query: 201 SCGGSPN----FSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL---------VWDI 247
+CGG N +S K R + V LP + G+++ +D I+ +WDI
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDNQIVTSSGDMTCALWDI 171
Query: 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 307
G TA H V+ LS+ ISG D L+++ G C K+
Sbjct: 172 ET-GQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDI--RDGMC--KQTFPGHE 226
Query: 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN--AVSFSSDCKLMA 365
I+ + P AT D R+++ R LA+ + + C +V+FS +L+
Sbjct: 227 SDINAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLF 286
Query: 366 SASEDSTVALWE 377
+ +D +W+
Sbjct: 287 AGYDDFNCNVWD 298
Score = 60 (26.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS-----SSWVHSAAHGIVS- 67
LRGH A + + + L + + G+L +WD+ V SSWV + A+
Sbjct: 51 LRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGS 110
Query: 68 -VATGPSIGLNKVIS-QGRDGTVK 89
VA G + + S + R+G V+
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVR 134
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 118 (46.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 36/143 (25%), Positives = 67/143 (46%)
Query: 238 EDGSILVWDIRNP-GIPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG 295
+D SI VWD+ +P I L + V H V + D+ +S D+ I ++ ST
Sbjct: 323 KDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYI--VSASGDRTIKVW----STS 376
Query: 296 SCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAV 355
+C + +N + GI+ R ++ + D +R+++ G+ L +L+ H +
Sbjct: 377 TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 434
Query: 356 SFSSDCKLMASASEDSTVALWEL 378
F D K + S + D + +W+L
Sbjct: 435 RF--DNKRIVSGAYDGKIKVWDL 455
Score = 114 (45.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 34/147 (23%), Positives = 68/147 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLD 291
++ G D ++ VWD+ N G L + H E VL L CNG ++ D+ I ++++
Sbjct: 278 IVTGSSDSTVRVWDV-NSGEVLNTLIHHNEAVLHLRF---CNGLMVTCSKDRSIAVWDMA 333
Query: 292 HSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
T +++ + R ++ D K +A DR +++++ + L H
Sbjct: 334 SPT-DISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG 390
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
+ + +L+ S S D+T+ LW++
Sbjct: 391 IACLQYRD--RLVVSGSSDNTIRLWDI 415
Score = 68 (29.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
+L GH SV +C + ++ G++ +R+WD V V ++ +H H +
Sbjct: 260 ILTGHTGSV--LCLQYDERVIVTGSSDSTVRVWD-VNSGEVLNTLIH---HNEAVLHLRF 313
Query: 73 SIGLNKVISQGRDGTVKCWDI 93
GL +++ +D ++ WD+
Sbjct: 314 CNGL--MVTCSKDRSIAVWDM 332
Score = 52 (23.4 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 175 VAGEQLSEVEIWDLNTAERC-TRLHQN 200
V G S V +WD+N+ E T +H N
Sbjct: 279 VTGSSDSTVRVWDVNSGEVLNTLIHHN 305
Score = 49 (22.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/72 (16%), Positives = 29/72 (40%)
Query: 25 CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84
C + +G ++IWD + H+ + ++ + + +++
Sbjct: 230 CLQYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGS--VLCLQYDERV----IVTGSS 283
Query: 85 DGTVKCWDIENG 96
D TV+ WD+ +G
Sbjct: 284 DSTVRVWDVNSG 295
Score = 40 (19.1 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRL 197
++G + + ++IWD T E C ++
Sbjct: 239 ISGLRDNSIKIWDKQTLE-CLKI 260
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 41/167 (24%), Positives = 69/167 (41%)
Query: 212 GRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE 271
G C+ + PS F +++ ED +I VWD + T +K H V + D+
Sbjct: 104 GHRNCINSVKFHPS----FSLMVSASEDATIKVWDFESGEFERT-LKGHTNAVQDIDFDK 158
Query: 272 SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRV 331
+ N S AD I L+ D T CV K ++ +S P ++ D+ +
Sbjct: 159 TGNLLASCSADLTIKLW--DFQTYDCV--KTLHGHDHNVSCVRFTPSGDQLISSSRDKTI 214
Query: 332 RIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+++ G + L H ++ S D +AS S D T+ W +
Sbjct: 215 KVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNI 261
Score = 102 (41.0 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH +V D+ F +T +L + + +++WD + V + +H H + V PS
Sbjct: 144 LKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKT--LHGHDHNVSCVRFTPS 201
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G +++IS RD T+K W+ G
Sbjct: 202 -G-DQLISSSRDKTIKVWEAATG 222
Score = 89 (36.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 33/129 (25%), Positives = 58/129 (44%)
Query: 232 NVLAGYE-DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 290
N+LA D +I +WD + T + H V C+ S + IS D+ I ++
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKT-LHGHDHNVSCVRFTPSGDQLISSSRDKTIKVW-- 217
Query: 291 DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
+ +TG C IK + E + ++ D A+ D+ ++ +N KG LA + H
Sbjct: 218 EAATGYC-IKTLVGHE-DWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSH 275
Query: 351 TCNAVSFSS 359
++FS+
Sbjct: 276 VVECLAFST 284
Score = 82 (33.9 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 24/91 (26%), Positives = 40/91 (43%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS-AAH 63
P PP+ +L GHR + V FH + ++ + + +++WD + H+ A
Sbjct: 94 PRPPEK-HILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQ 152
Query: 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
I TG N + S D T+K WD +
Sbjct: 153 DIDFDKTG-----NLLASCSADLTIKLWDFQ 178
Score = 74 (31.1 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 323 ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
AT D+ ++I+ G LA H AV F K + S +D T+ +W++
Sbjct: 320 ATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDI 375
Score = 62 (26.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96
I SV PS L ++S D T+K WD E+G
Sbjct: 109 INSVKFHPSFSL--MVSASEDATIKVWDFESG 138
Score = 52 (23.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 361 CKLMASASEDSTVALWEL 378
C +A+ S D T+ +WEL
Sbjct: 316 CGYLATGSRDKTIKIWEL 333
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 120 (47.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 260 HLEPVLCLSIDESCNGGI--SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317
H PV+C+ I S +G + +G AD+ + ++ LD G C K + + P
Sbjct: 590 HKLPVICMDI--SHDGALIATGSADRNVKIWGLDF--GDC--HKSLFAHDDSVMYLQFVP 643
Query: 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT--CNAVSFSSDCKLMASASEDSTVAL 375
S + TAG D +++ ++ K + L+ HH C AVS S D + S+S D ++ L
Sbjct: 644 KSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGD--YVVSSSHDKSLRL 701
Query: 376 WE 377
WE
Sbjct: 702 WE 703
Score = 72 (30.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
GH+A++T + + Q L +G+ ++ +WD + + H A ++ A
Sbjct: 105 GHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDA---ITQALFLR-E 160
Query: 76 LNKVISQGRDGTVKCWDIE 94
N +++ G+D VK WD++
Sbjct: 161 KNLLVTSGKDTMVKWWDLD 179
Score = 60 (26.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 18/81 (22%), Positives = 36/81 (44%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDT-VQHRTVSSSWVHSAAHGIVSVATGP 72
L+GH+ ++T F + K +L ++ WD QH + + G+V ++
Sbjct: 145 LKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEE- 203
Query: 73 SIGLNKVISQGRDGTVKCWDI 93
++I+ D ++ WDI
Sbjct: 204 ----KRLITGASDSELRVWDI 220
Score = 59 (25.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 36 GTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
GT G+L+++D + + H A + S++ P ++ G D +VK WD E
Sbjct: 472 GTKTGKLQLYDLASGNLLETIDAHDGA--LWSMSLSPD--QRGFVTGGADKSVKFWDFE 526
Score = 53 (23.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
+ + +L+G + VT +C L G G +RI+ + + H AA ++
Sbjct: 56 EKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAA---ITT 112
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIEN-GGL 98
+G ++ S +D + WD+ N GL
Sbjct: 113 LKYDQLG-GRLASGSKDTDIIVWDVINESGL 142
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 116 (45.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 49/203 (24%), Positives = 91/203 (44%)
Query: 183 VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 242
V +WD T ER RL G +F V + P++ +G V G +DG++
Sbjct: 133 VAVWDSETGERVKRLK-----GHTSF----------VNSCYPAR-RGPQLVCTGSDDGTV 176
Query: 243 LVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE 302
+WDIR T + VL ++ +++ + ISGG D I +++L + + ++
Sbjct: 177 KLWDIRKKAAIQTFQNTY--QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 234
Query: 303 INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR----KGSALAILK--YHHATCNAV- 355
+ ++G S+ + + D VR+++ R K + I + H+ N +
Sbjct: 235 AD----SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 290
Query: 356 -SFSSDCKLMASASEDSTVALWE 377
S+S D +A+ S D V +W+
Sbjct: 291 CSWSPDGSKIAAGSADRFVYVWD 313
Score = 96 (38.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 100 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 159
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDI 93
GP + V + DGTVK WDI
Sbjct: 160 ARRGPQL----VCTGSDDGTVKLWDI 181
Score = 88 (36.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 37/134 (27%), Positives = 62/134 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D I VWD+R + T M+ H + V LS+ + +S D + ++++
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 266
Query: 293 STGS--CV--IKKEI-NLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYRKGSALAILK 346
CV + + N E+ + S PD SKIAA + DR V +++ L L
Sbjct: 267 FAPKERCVKIFQGNVHNFEK-NLLRCSWSPDGSKIAAGSA-DRFVYVWDTTSRRILYKLP 324
Query: 347 YHHATCNAVSFSSD 360
H + N V+F D
Sbjct: 325 GHAGSINEVAFHPD 338
Score = 54 (24.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 24/91 (26%), Positives = 34/91 (37%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIW----DTVQHRTVSSSWVHSAAHGI 65
P+ +L GH V FH L + + +W D + T+ HS A
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG---HSGAVME 114
Query: 66 VSVATGPSIGLNKVISQGRDGTVKCWDIENG 96
+ T S+ + S D TV WD E G
Sbjct: 115 LHYNTDGSM----LFSASTDKTVAVWDSETG 141
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 119 (46.9 bits), Expect = 0.00086, P = 0.00086
Identities = 42/153 (27%), Positives = 74/153 (48%)
Query: 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNLDH 292
AG+ I VWD+ + + K H PV+ ++ S GG+ + GAD+K++++++D
Sbjct: 78 AGHSR-QIRVWDLETLKC-IRSWKGHEGPVMGMACHAS--GGLLATAGADRKVLVWDVDG 133
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYR-KGS---ALAILK 346
G C + +S PDS I + D VR+++ K + LAI++
Sbjct: 134 --GFCT--HYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIME 189
Query: 347 YHHATCNAVSFSSDCKLMASASEDSTVALWELY 379
H + +++ S D + SA D V LW+L+
Sbjct: 190 KHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLH 222
Score = 102 (41.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 26/85 (30%), Positives = 38/85 (44%)
Query: 15 RGHRASVTDVCFH--QTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH--GIVSVAT 70
RGH+ V+ + FH K IL +G+ +R+WD T H + S+A
Sbjct: 141 RGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIAL 200
Query: 71 GPSIGLNKVISQGRDGTVKCWDIEN 95
GL + S GRD V WD+ +
Sbjct: 201 SED-GLT-LFSAGRDKVVNLWDLHD 223
Score = 89 (36.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 55/251 (21%), Positives = 109/251 (43%)
Query: 140 VGETVDTDSLCDSKESNRSFEIIDDVPAEGPK--YMAVAGEQLSEVEIWDLNTAERCTRL 197
V E V+ L SK E I D+ G + ++AVA L EV ++D+ T
Sbjct: 339 VVENVEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVA-TNLEEVRVYDVATM------ 391
Query: 198 HQNSCGGSPNFSSKG-RGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 256
SC ++ G + + +++ + S G V ++ G +D ++ +W+ + +
Sbjct: 392 ---SC----SYVLAGHKEVVLSLDTCV--SSSGNVLIVTGSKDKTVRLWNATSKSC-IGV 441
Query: 257 MKVHLEPVLCLSI-DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG------ 309
H +L ++ +S + +SG D+ + +++LD + ++ INL+
Sbjct: 442 GTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDS--EEPINLKTRSVVAAHD 499
Query: 310 --ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASA 367
I+ ++ + + T DR I+ + LK H +V FS+ + + +A
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTA 559
Query: 368 SEDSTVALWEL 378
S D TV +W +
Sbjct: 560 SGDKTVKIWAI 570
Score = 80 (33.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 27/145 (18%), Positives = 57/145 (39%)
Query: 233 VLAGYEDGSILVWDIRNPG-IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291
V G ED + +W R P + + +K H + + ++ D+ + ++ +
Sbjct: 514 VCTGSEDRTASIW--RLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAI- 570
Query: 292 HSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
S GSC+ K + S D + G D ++++N +A H
Sbjct: 571 -SDGSCL--KTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDK 627
Query: 352 CNAVSFSSDCKLMASASEDSTVALW 376
A++ +++A+ D+ + LW
Sbjct: 628 VWALAVGKKTEMIATGGGDAVINLW 652
Score = 71 (30.1 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 232 NVL-AGYEDGSILVWDIRNPGIP---LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVL 287
N+L +G +D ++ VWD+ L M+ H V +++ E S G D+ + L
Sbjct: 159 NILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNL 218
Query: 288 YNL-DHSTGSCVIKKEI 303
++L D+S + V E+
Sbjct: 219 WDLHDYSCKATVATYEV 235
Score = 71 (30.1 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 19/85 (22%), Positives = 38/85 (44%)
Query: 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
+ + G ++T + +LF+ ++R+WD + + S H ++ +A
Sbjct: 54 STIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGP--VMGMACH 111
Query: 72 PSIGLNKVISQGRDGTVKCWDIENG 96
S GL + + G D V WD++ G
Sbjct: 112 ASGGL--LATAGADRKVLVWDVDGG 134
Score = 67 (28.6 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 324 TAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
TA D+ V+I+ GS L + H ++ SF +D S D + LW +
Sbjct: 558 TASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNV 612
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 142 (55.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 39/125 (31%), Positives = 60/125 (48%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312
PL HL V C + N +G AD+ + L+ D G+CV + + I
Sbjct: 599 PLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLW--DVLNGNCV--RIFTGHKGPIHS 654
Query: 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST 372
+ P+ + AT D RV +++ G + LK H T A+ FS D +++AS S D+T
Sbjct: 655 LAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNT 714
Query: 373 VALWE 377
V LW+
Sbjct: 715 VRLWD 719
Score = 129 (50.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L+ EDG++ +W ++ L K H PV +SGG D+ L+ DH
Sbjct: 538 LLSCSEDGTVRLWSLQTFTC-LVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH 596
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ + ++ T P+S AT DR VR+++ G+ + I H
Sbjct: 597 YQPLRIFAGHL----ADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPI 652
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
++++FS + + +A+ + D V LW++
Sbjct: 653 HSLAFSPNGRFLATGATDGRVLLWDI 678
Score = 45 (20.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 77 NKVISQGRDGTVKCWDIE 94
N ++S DGTV+ W ++
Sbjct: 536 NYLLSCSEDGTVRLWSLQ 553
Score = 44 (20.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIW 45
+L GH V F + L + + G +R+W
Sbjct: 518 ILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLW 550
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/151 (25%), Positives = 71/151 (47%)
Query: 227 SQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIV 286
SQ + + +D +I +WD+ + G + +K H E V +S + N +SG D+ +
Sbjct: 97 SQDSKLICSASDDKTIKIWDVES-GKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVR 155
Query: 287 LYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK 346
++ D +TG C K I+ ++G D + + +D VRI++ G L +
Sbjct: 156 IW--DVNTGECT--KMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIS 211
Query: 347 YHHAT-CNAVSFSSDCKLMASASEDSTVALW 376
+ V FS + K + + + D+T+ LW
Sbjct: 212 TEDGKEVSFVKFSPNGKFVLAGTLDNTLRLW 242
Score = 116 (45.9 bits), Expect = 0.00045, P = 0.00045
Identities = 32/139 (23%), Positives = 62/139 (44%)
Query: 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV 298
D +I +W + T ++ H E + ++ + S D+ I +++++ +G V
Sbjct: 67 DKTIKIWGAYDGKFERT-LEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVE--SGKMV 123
Query: 299 IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFS 358
K + + + G S P S + + +D VRI++ G ++ H V F+
Sbjct: 124 --KTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFN 181
Query: 359 SDCKLMASASEDSTVALWE 377
D L+ S S D TV +W+
Sbjct: 182 RDGTLVVSGSYDGTVRIWD 200
Score = 114 (45.2 bits), Expect = 0.00075, P = 0.00075
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN 353
T + ++K + IS PD K A+A D+ ++I+ G L+ H +
Sbjct: 33 TPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGIS 92
Query: 354 AVSFSSDCKLMASASEDSTVALWEL 378
+++S D KL+ SAS+D T+ +W++
Sbjct: 93 DIAWSQDSKLICSASDDKTIKIWDV 117
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 104 (41.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 35/152 (23%), Positives = 69/152 (45%)
Query: 231 VNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 290
V V AG D VWD+R + + H V L++ E ++G D I L++L
Sbjct: 261 VLVTAG-RDAVARVWDMRTRQ-NVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDL 318
Query: 291 DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
+ G + + + + S+ PD A+ D ++ + + +G+ + + H+A
Sbjct: 319 --AAGKTLTT--LTHHKKTVRALSLHPDEFTFASGSSDN-IKHWKFPEGAFMGNFEGHNA 373
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWELYPPH 382
N +S +SD +M S +++ ++ W+ H
Sbjct: 374 IVNTLSINSD-NVMFSGADNGSMCFWDWKSGH 404
Score = 80 (33.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 19/80 (23%), Positives = 37/80 (46%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH A+V + P LF+ ++ WD ++ + H G+ ++ P+
Sbjct: 201 LTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRH--YHGHLSGVYALKLHPT 258
Query: 74 IGLNKVISQGRDGTVKCWDI 93
L+ +++ GRD + WD+
Sbjct: 259 --LDVLVTAGRDAVARVWDM 276
Score = 60 (26.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 21/84 (25%), Positives = 33/84 (39%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
V+ GH V V G ++IWD ++S + G ++ G
Sbjct: 158 VISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWD------LASGVLKLTLTGHIATVRGL 211
Query: 73 SIGLNK--VISQGRDGTVKCWDIE 94
++ + S G D VKCWD+E
Sbjct: 212 AVSPRHPYLFSCGEDKMVKCWDLE 235
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 108 (43.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 35/149 (23%), Positives = 64/149 (42%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSI--DESCNGGISGGADQKIVLYNL 290
+L G D + +WD+ + G L + H V+ + + +E+ N +SG D+ ++
Sbjct: 173 ILTGSGDSTCALWDVES-GQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIW-- 229
Query: 291 DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
D +G V + + ++ P AT D R+Y+ R +A+
Sbjct: 230 DMRSGHVV--QSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESI 287
Query: 351 T--CNAVSFSSDCKLMASASEDSTVALWE 377
N+V FS +L+ + D TV LW+
Sbjct: 288 IFGVNSVDFSVSGRLLFAGYNDYTVNLWD 316
Score = 87 (35.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 32/145 (22%), Positives = 62/145 (42%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIV-LYNLDH 292
++G D +WD+R+ G + + + H V + C I+ G+D LY++
Sbjct: 218 VSGSCDRMAFIWDMRS-GHVVQSFEGHQSDVNSVKF-HPCGDAIATGSDDSSCRLYDMRA 275
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGW-DRRVRIYNYRKGSALAILKYHHAT 351
V KE + G++ ++ AG+ D V +++ K + +L H
Sbjct: 276 DREVAVFAKESIIF--GVNSVDFSVSGRLLF-AGYNDYTVNLWDTLKSERVCLLYGHENK 332
Query: 352 CNAVSFSSDCKLMASASEDSTVALW 376
+ V S D +++ S D T+ +W
Sbjct: 333 VSCVQVSPDGTALSTGSWDYTIRVW 357
Score = 72 (30.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 31/111 (27%), Positives = 49/111 (44%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV----QHR-TVSSSWVHSAAHG 64
P VL+GH+A V + K + + + G L IWD +H T+ ++W+ + A+
Sbjct: 62 PRKVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYA 121
Query: 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTN-SYHFC 114
PS G N V G D V + I + + T+ T+ SY C
Sbjct: 122 -------PS-G-NFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSC 163
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 144 (55.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 38/148 (25%), Positives = 71/148 (47%)
Query: 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 294
+G D + +W PL HL V C+ + N +G D+ + L++
Sbjct: 401 SGSHDRTARLWSFDRT-YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-- 457
Query: 295 GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA 354
G+ V + R + + P+ K A+AG D+R+++++ G+ L+ H +
Sbjct: 458 GNSV--RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITS 515
Query: 355 VSFSSDCKLMASASEDSTVALWELYPPH 382
++FS D L+ASAS D++V +W++ H
Sbjct: 516 LTFSPDSSLIASASMDNSVRVWDIRNTH 543
Score = 39 (18.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD 46
VLRGH V F L + + +R WD
Sbjct: 337 VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD 370
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 121 (47.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 33/146 (22%), Positives = 68/146 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V + D +I +W + N + ++ H V LS+ + + +S DQ ++
Sbjct: 280 VFSASPDATIRIWSVPNASC-VQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQ- 337
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
TG + K ++ PD I T D +++I++ ++ + +A H
Sbjct: 338 -TGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPI 396
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
+++FS + +A+A++DS+V LW+L
Sbjct: 397 TSIAFSENGYYLATAADDSSVKLWDL 422
Score = 62 (26.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 23 DVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82
D+C T IL G + ++D + +++ HS + SV PS L V S
Sbjct: 229 DLCPSDTNKILTGGADKNVI-VFDKSSEQILATLKGHSKK--VTSVVFHPSQDL--VFSA 283
Query: 83 GRDGTVKCWDIEN 95
D T++ W + N
Sbjct: 284 SPDATIRIWSVPN 296
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 137 (53.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 38/140 (27%), Positives = 68/140 (48%)
Query: 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV 298
D + +W + PL M HL V C+ +CN +G +D+ + L+ D TG CV
Sbjct: 481 DRTARIWSMDRIQ-PLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLW--DVQTGECV 537
Query: 299 IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFS 358
+ I R + ++ PD + A+ D + +++ + L H++ ++S+S
Sbjct: 538 -RIFIG-HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYS 595
Query: 359 SDCKLMASASEDSTVALWEL 378
+ L+AS S D TV LW++
Sbjct: 596 GEGSLLASGSADCTVKLWDV 615
Score = 48 (22.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 233 VLAGYEDGSILVWDIRNPG 251
V G+ D SI VWD+ G
Sbjct: 367 VAGGFSDSSIKVWDMAKIG 385
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 85 DGTVKCWDIENGGLSSNPSLTIKTNS 110
D ++K WD+ G + + +L + +S
Sbjct: 373 DSSIKVWDMAKIGQAGSGALQAENDS 398
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDT 47
+L GH V F + + + +R+W T
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWST 447
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 120 (47.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 36/143 (25%), Positives = 67/143 (46%)
Query: 238 EDGSILVWDIRNP-GIPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG 295
+D SI VWD+ +P I L + V H V + D+ +S D+ I ++N T
Sbjct: 302 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI--VSASGDRTIKVWN----TS 355
Query: 296 SCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAV 355
+C + +N + GI+ R ++ + D +R+++ G+ L +L+ H +
Sbjct: 356 TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 413
Query: 356 SFSSDCKLMASASEDSTVALWEL 378
F D K + S + D + +W+L
Sbjct: 414 RF--DNKRIVSGAYDGKIKVWDL 434
Score = 116 (45.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 34/147 (23%), Positives = 68/147 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLD 291
++ G D ++ VWD+ N G L + H E VL L + NG ++ D+ I ++++
Sbjct: 257 IITGSSDSTVRVWDV-NAGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMA 312
Query: 292 HSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
T +++ + R ++ D K +A DR ++++N + L H
Sbjct: 313 SPT-DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 369
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
+ + +L+ S S D+T+ LW++
Sbjct: 370 IACLQYRD--RLVVSGSSDNTIRLWDI 394
Score = 63 (27.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 15/81 (18%), Positives = 39/81 (48%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
+L GH SV +C + ++ G++ +R+WD V + ++ +H ++ +
Sbjct: 239 ILTGHTGSV--LCLQYDERVIITGSSDSTVRVWD-VNAGEMLNTLIHHC-EAVLHLRFNN 294
Query: 73 SIGLNKVISQGRDGTVKCWDI 93
+ +++ +D ++ WD+
Sbjct: 295 GM----MVTCSKDRSIAVWDM 311
Score = 49 (22.3 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 78 KVISQGRDGTVKCWD 92
K++S RD T+K WD
Sbjct: 216 KIVSGLRDNTIKIWD 230
Score = 46 (21.3 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 175 VAGEQLSEVEIWDLNTAERC-TRLH 198
+ G S V +WD+N E T +H
Sbjct: 258 ITGSSDSTVRVWDVNAGEMLNTLIH 282
Score = 44 (20.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRL 197
V+G + + ++IWD +T E C R+
Sbjct: 218 VSGLRDNTIKIWDKSTLE-CKRI 239
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 127 (49.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 40/171 (23%), Positives = 72/171 (42%)
Query: 207 NFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLC 266
NF KG + + PS Q + +G D S++VW+++ P H + V C
Sbjct: 13 NF--KGHRDAITSLDFSPSGKQ----IASGSVDASVMVWNMK-PQSRAYRFTGHKDAVTC 65
Query: 267 LSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG 326
+ S + S D+ + L+ + G V+ + D + TA
Sbjct: 66 VQFSPSAHLLASSSRDKTVRLW-VPSVKGESVL---FRAHTGSVRSVCFSADGQSLLTAS 121
Query: 327 WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
D+ +++++ + + L+ H+ FS D +LM S S+D TV LW+
Sbjct: 122 DDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWD 172
Score = 113 (44.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 40/148 (27%), Positives = 64/148 (43%)
Query: 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291
++L +D SI +W + I T ++ H V C +S D+ + L+ D
Sbjct: 116 SLLTASDDQSIKLWSVHRQKIICT-LREHNNWVRCARFSPDGQLMVSVSDDRTVKLW--D 172
Query: 292 HSTGSCVIKKEINLERPGISG-TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
S+ + E G S P S ATA D VR+++ R + L + H A
Sbjct: 173 ASSRQLI---HTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSA 229
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWEL 378
NA+SF + +AS DST+ + +L
Sbjct: 230 AVNALSFHPSGNHLLTASSDSTLKILDL 257
Score = 68 (29.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI 74
+GHR ++T + F + + +G+ + +W+ H A + V PS
Sbjct: 15 KGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDA--VTCVQFSPSA 72
Query: 75 GLNKVISQGRDGTVKCW 91
L + S RD TV+ W
Sbjct: 73 HL--LASSSRDKTVRLW 87
>FB|FBgn0044323 [details] [associations]
symbol:Cka "Connector of kinase to AP-1" species:7227
"Drosophila melanogaster" [GO:0007254 "JNK cascade"
evidence=NAS;TAS] [GO:0007391 "dorsal closure"
evidence=IMP;NAS;TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0042051 "compound eye photoreceptor development"
evidence=IMP] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0072686 "mitotic spindle" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007254 GO:GO:0007391 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046330 GO:GO:0072686
InterPro:IPR013258 Pfam:PF08232 EMBL:AF011332
ProteinModelPortal:Q86M30 SMR:Q86M30 STRING:Q86M30 PaxDb:Q86M30
PRIDE:Q86M30 FlyBase:FBgn0044323 InParanoid:Q86M30
OrthoDB:EOG4HX3G4 ArrayExpress:Q86M30 Bgee:Q86M30 Uniprot:Q86M30
Length = 730
Score = 101 (40.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 44/156 (28%), Positives = 67/156 (42%)
Query: 185 IWDLNTAERCTRLH--QNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 242
++D T ++ RL Q G + F +K + LP + + A +ED I
Sbjct: 591 VYDTETGKQVVRLEAAQEMSGNTGKFINK-----VVSHPTLP------ITITA-HEDRHI 638
Query: 243 LVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE 302
WD G + +M HLEPV L++D +SG D I L+NLD+ T CV +E
Sbjct: 639 RFWD-NTSGTLVHSMVAHLEPVTSLAVDAHGLYLLSGSHDCSIRLWNLDNKT--CV--QE 693
Query: 303 INLERP----GISGTSIRPDSKIAATAGWDRRVRIY 334
I R I + A+AG D +++
Sbjct: 694 ITAHRKKFDESIFDVAFHATKPYIASAGADGLAKVF 729
Score = 88 (36.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 37/158 (23%), Positives = 63/158 (39%)
Query: 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291
N+++ DG++ +W N PL E + S + + D +V YN
Sbjct: 533 NIVSCSADGTVKLWSPYNKE-PLLRTYTASEAE---GVPSSVDF-VRNEVDHIVVAYNSA 587
Query: 292 H------STGSCVIKKEINLERPGISGTSIR-----PDSKIAATAGWDRRVRIYNYRKGS 340
H TG V++ E E G +G I P I TA DR +R ++ G+
Sbjct: 588 HCIVYDTETGKQVVRLEAAQEMSGNTGKFINKVVSHPTLPITITAHEDRHIRFWDNTSGT 647
Query: 341 ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + H +++ + + S S D ++ LW L
Sbjct: 648 LVHSMVAHLEPVTSLAVDAHGLYLLSGSHDCSIRLWNL 685
Score = 87 (35.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 25/87 (28%), Positives = 38/87 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWD---TVQHRTVSSSWVHSA----AHGIV 66
LR H V + FH +P+L + L++W+ TVQ + +S V AH
Sbjct: 411 LRSHFDGVRSLIFHPEEPVLITASEDHTLKLWNLQKTVQAKKSASLDVEPLYTFRAHTGP 470
Query: 67 SVATGPSIGLNKVISQGRDGTVKCWDI 93
+ G S S G DG ++CW +
Sbjct: 471 VLCLGMSSSGETCYSGGLDGNIECWQL 497
>FB|FBgn0261119 [details] [associations]
symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS]
[GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 OMA:QWQELKV FlyBase:FBgn0261119
EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 SMR:Q7KLW9
IntAct:Q7KLW9 STRING:Q7KLW9 EnsemblMetazoa:FBtr0086723 GeneID:37123
KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9
GenomeRNAi:37123 NextBio:802060 Uniprot:Q7KLW9
Length = 505
Score = 139 (54.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 39/146 (26%), Positives = 74/146 (50%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V+ G D +I +W + L ++ H PV LS+ + + +S +D+ ++
Sbjct: 280 VITGSPDMNIRIWHVPTSQTQLL-LRCHEGPVTGLSLHPTGDYLLSTSSDKHWAFSDI-- 336
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
TG ++ K I+ G++ PD I T D +V+I++ ++ S +A H
Sbjct: 337 RTGR-LLTKVIDTAEVGLTTAQFHPDGLIFGTGTVDSQVKIWDLKEQSNVANFPGHTGPI 395
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
+A+SFS + +A+A++D+ V LW+L
Sbjct: 396 SAISFSENGYYLATAADDACVKLWDL 421
Score = 88 (36.0 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 35/145 (24%), Positives = 58/145 (40%)
Query: 236 GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIV-LYNLDHS 293
G D + +WD++ + H P+ +S E NG ++ AD V L++L
Sbjct: 368 GTVDSQVKIWDLKEQS-NVANFPGHTGPISAISFSE--NGYYLATAADDACVKLWDLRKL 424
Query: 294 TGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN 353
I+ + E + A AG D VR+Y ++ L + H A
Sbjct: 425 KNFKTIQLDDGYE---VKDLCFDQSGTYLAIAGSD--VRVYLCKQWQELKVFNDHTALAT 479
Query: 354 AVSFSSDCKLMASASEDSTVALWEL 378
V F + +AS S D T+ L+ +
Sbjct: 480 GVRFGKHAQYLASTSMDRTLKLYAI 504
Score = 74 (31.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT 52
VA+L+GH +T V +H + + G+ +RIW +T
Sbjct: 258 VAILKGHTKKITKVIYHPNEDTVITGSPDMNIRIWHVPTSQT 299
>UNIPROTKB|G4MWF1 [details] [associations]
symbol:MGG_08345 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 EMBL:CM001232
KO:K03361 RefSeq:XP_003715718.1 EnsemblFungi:MGG_08345T0
GeneID:2678612 KEGG:mgr:MGG_08345 Uniprot:G4MWF1
Length = 1033
Score = 137 (53.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 54/212 (25%), Positives = 99/212 (46%)
Query: 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK--- 226
PK + + G + S++ +W L E +R + + G P ++ +Q + S
Sbjct: 761 PKPLIITGSRDSQLRVWRL--PEAGSRRYIQT--GPPANDAECPYFLRILQGHTHSVRAI 816
Query: 227 SQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIV 286
S +++G D S+ VW I + G L ++ H + V + +D N ISG D +
Sbjct: 817 SAHADTLVSGSYDCSVRVWRI-STGEQLHWLQGHSQKVYSVVLDHKRNRCISGSMDSLVK 875
Query: 287 LYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK 346
+++L+ TG+C+ E + G+ +R + ++A A D +RI++ G +IL
Sbjct: 876 IWDLE--TGACLYTLEGHSLLVGL--LDLRDERLVSAAA--DSTLRIWDPENGKCKSILT 929
Query: 347 YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H A F D + + S SE TV +W++
Sbjct: 930 AHTAAITC--FQHDSRKVISGSE-KTVKMWDI 958
Score = 52 (23.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 77 NKVISQGRDGTVKCWDIENG 96
N ++S D +V+ WDIE G
Sbjct: 705 NTLVSGSTDRSVRVWDIEKG 724
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 30 KPILFAGTTGGELRIW 45
KP++ G+ +LR+W
Sbjct: 762 KPLIITGSRDSQLRVW 777
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 50/216 (23%), Positives = 102/216 (47%)
Query: 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRG-MCMAVQAYLPSKSQG 229
K++A + ++V +++ T E +L S + + ++ G + + + P G
Sbjct: 213 KFIATGCNKTTQV--FNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPD---G 267
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
+ + G ED I +WD+ I + ++ H + + L + +SG D+ + +++
Sbjct: 268 KL-LATGAEDKLIRIWDLSTKRI-IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWD 325
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY-- 347
L T C + +++E G++ ++ PD K+ A DR VR+++ G + L
Sbjct: 326 L--RTSQCSLT--LSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGN 380
Query: 348 -----HHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H + +V+FS++ + +AS S D TV LW L
Sbjct: 381 ENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHL 416
Score = 102 (41.0 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 29/89 (32%), Positives = 41/89 (46%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+ +LRGH + + F L +G+ +RIWD RT S S G+ +VA
Sbjct: 290 IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL---RTSQCSLTLSIEDGVTTVAV 346
Query: 71 GPSIGLNKVISQGR-DGTVKCWDIENGGL 98
P K+I+ G D TV+ WD G L
Sbjct: 347 SPD---GKLIAAGSLDRTVRVWDSTTGFL 372
Score = 68 (29.0 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 32/159 (20%), Positives = 67/159 (42%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKV-------HLEPVLCLSIDESCNGGISGGADQKI 285
+ AG D ++ VWD G + + H + V ++ + SG D+ +
Sbjct: 353 IAAGSLDRTVRVWD-STTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTV 411
Query: 286 VLYNLDHST---GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL 342
L++L+ + +C + I + + PD++ + DR V ++ G+ L
Sbjct: 412 KLWHLEGKSDKKSTCEVTY-IG-HKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPL 469
Query: 343 AILKYHHATCNAVSFSSDCK----LMASASEDSTVALWE 377
+L+ H + +V+ S + K + A+ S D +W+
Sbjct: 470 LMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWK 508
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 50/216 (23%), Positives = 102/216 (47%)
Query: 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRG-MCMAVQAYLPSKSQG 229
K++A + ++V +++ T E +L S + + ++ G + + + P G
Sbjct: 213 KFIATGCNKTTQV--FNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPD---G 267
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
+ + G ED I +WD+ I + ++ H + + L + +SG D+ + +++
Sbjct: 268 KL-LATGAEDKLIRIWDLSTKRI-IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWD 325
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY-- 347
L T C + +++E G++ ++ PD K+ A DR VR+++ G + L
Sbjct: 326 L--RTSQCSLT--LSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGN 380
Query: 348 -----HHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H + +V+FS++ + +AS S D TV LW L
Sbjct: 381 ENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHL 416
Score = 102 (41.0 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 29/89 (32%), Positives = 41/89 (46%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+ +LRGH + + F L +G+ +RIWD RT S S G+ +VA
Sbjct: 290 IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL---RTSQCSLTLSIEDGVTTVAV 346
Query: 71 GPSIGLNKVISQGR-DGTVKCWDIENGGL 98
P K+I+ G D TV+ WD G L
Sbjct: 347 SPD---GKLIAAGSLDRTVRVWDSTTGFL 372
Score = 68 (29.0 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 32/159 (20%), Positives = 67/159 (42%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKV-------HLEPVLCLSIDESCNGGISGGADQKI 285
+ AG D ++ VWD G + + H + V ++ + SG D+ +
Sbjct: 353 IAAGSLDRTVRVWD-STTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTV 411
Query: 286 VLYNLDHST---GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL 342
L++L+ + +C + I + + PD++ + DR V ++ G+ L
Sbjct: 412 KLWHLEGKSDKKSTCEVTY-IG-HKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPL 469
Query: 343 AILKYHHATCNAVSFSSDCK----LMASASEDSTVALWE 377
+L+ H + +V+ S + K + A+ S D +W+
Sbjct: 470 LMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWK 508
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 106 (42.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 35/140 (25%), Positives = 65/140 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V G D + +WD+ + G ++ + H ++ L + + + ++G D +L+ D
Sbjct: 192 VATGSMDTTAKLWDVES-GEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILW--DV 248
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+G V ++ R IS D + ATA D+ ++++ G LA L H+
Sbjct: 249 PSGRKV--HVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEV 306
Query: 353 NAVSFSSDCKLMASASEDST 372
V F+ +L+A+AS D T
Sbjct: 307 LDVCFNYTGQLIATASADGT 326
Score = 85 (35.0 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 29/145 (20%), Positives = 56/145 (38%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V G D + +W G + H ++CL+ + +G D L++++
Sbjct: 150 VATGSFDKTCKLWSAET-GKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVE- 207
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+G V + I T +D +++ G + +L H
Sbjct: 208 -SGEEVSTLAGHFAE--IISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEI 264
Query: 353 NAVSFSSDCKLMASASEDSTVALWE 377
+ V F+ DC L+A+AS D + +W+
Sbjct: 265 SCVQFNWDCSLIATASLDKSCKVWD 289
Score = 82 (33.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 31/138 (22%), Positives = 60/138 (43%)
Query: 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV 298
D S VWD G L + H + VL + + + + AD +++ D T C+
Sbjct: 282 DKSCKVWDAEG-GQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTD--TFQCL 338
Query: 299 IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFS 358
+ E + + IS TA D+ R++ + G+ L +L+ H + +F+
Sbjct: 339 CQLEGH--KGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFN 396
Query: 359 SDCKLMASASEDSTVALW 376
+ + + S+D+T +W
Sbjct: 397 YEGDTIITGSKDNTCRIW 414
Score = 79 (32.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 24/88 (27%), Positives = 37/88 (42%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
+ V+ L GH A + +CF+ T L G+ +WD R V V S G +S
Sbjct: 210 EEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVH---VLSGHRGEISC 266
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENG 96
+ + + + D + K WD E G
Sbjct: 267 VQF-NWDCSLIATASLDKSCKVWDAEGG 293
Score = 76 (31.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 20/82 (24%), Positives = 39/82 (47%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI 74
RGH A + + F+ ++ G+ ++WD VS+ H A I+S+ +
Sbjct: 174 RGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAE--IISLCFNTT- 230
Query: 75 GLNKVISQGRDGTVKCWDIENG 96
G +++++ D T WD+ +G
Sbjct: 231 G-DRLVTGSFDHTAILWDVPSG 251
Score = 75 (31.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+ H +T+V F+++ G+ +IWDT + + H + ++A
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNV--VYAIAFNNP 145
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G +KV + D T K W E G
Sbjct: 146 YG-DKVATGSFDKTCKLWSAETG 167
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 101 (40.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 36/114 (31%), Positives = 57/114 (50%)
Query: 267 LSIDESCNGG-ISGGADQKIVLYNL-DHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 324
LSI S +G ++ GA I+ N+ D +TG + E + P I + PDS++ T
Sbjct: 152 LSIAYSPDGKYLASGAIDGII--NIFDIATGKLLHTLEGHA-MP-IRSLTFSPDSQLLVT 207
Query: 325 AGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
A D ++IY + S A L H + V+FS D S+S D +V +W++
Sbjct: 208 ASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDV 261
Score = 76 (31.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91
++ +G+ +++W R S + G+VSV PS G N + S D ++ W
Sbjct: 34 LVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPS-G-NIMASSSLDAHIRLW 91
Query: 92 DIENG 96
D+E+G
Sbjct: 92 DLESG 96
Score = 52 (23.4 bits), Expect = 0.00083, Sum P(2) = 0.00082
Identities = 18/86 (20%), Positives = 37/86 (43%)
Query: 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
+ L GH+ V V + I+ + + +R+WD + + + + + SVA
Sbjct: 58 STLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRA--IDAGPVDAWSVAFS 115
Query: 72 PSIGLNKVISQGRD-GTVKCWDIENG 96
P ++ ++ G G V + +E G
Sbjct: 116 PD---SQHLATGSHVGKVNIFGVETG 138
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 115 (45.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 307 RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMAS 366
R + S P+ K A+AG D+R+++++ G+ L+ H + +++FS D L+AS
Sbjct: 22 RGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIAS 81
Query: 367 ASEDSTVALWEL 378
AS D++V +W++
Sbjct: 82 ASMDNSVRVWDI 93
>UNIPROTKB|G4MUL1 [details] [associations]
symbol:MGG_07284 "Target-rapamycin complex subunit LST8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0001558 "regulation of cell growth"
evidence=ISS] [GO:0006810 "transport" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0010008 "endosome membrane"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0030950 "establishment or maintenance of actin
cytoskeleton polarity" evidence=ISS] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=ISS] [GO:0031505
"fungal-type cell wall organization" evidence=ISS] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=ISS] [GO:0031931
"TORC1 complex" evidence=ISS] [GO:0031932 "TORC2 complex"
evidence=ISS] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558 GO:GO:0031929
GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030295
GO:GO:0010008 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 EMBL:CM001232 GO:GO:0031932 GO:GO:0031234 KO:K08266
RefSeq:XP_003715510.1 ProteinModelPortal:G4MUL1
EnsemblFungi:MGG_07284T0 GeneID:2683030 KEGG:mgr:MGG_07284
Uniprot:G4MUL1
Length = 317
Score = 110 (43.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS 67
P+ + GH +VT V FH + + G ++IW+T + T+ S+ H + +
Sbjct: 65 PNALLTFEGHTGNVTGVAFHCEGKWMVTSSEDGTVKIWET-RTGTIQRSYNHQSP--VND 121
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSS 100
V P+ G ++IS R GT++ WD+ + +S
Sbjct: 122 VVIHPNQG--EIISCDRAGTIRLWDLADNKCTS 152
Score = 66 (28.3 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 34/154 (22%), Positives = 61/154 (39%)
Query: 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQK--IVLYNLDHSTGSC 297
G+I +WD+ + T+ V E V S+ + +G + A+ + + ++ L
Sbjct: 138 GTIRLWDLADN--KCTSEMVPEEDVSVSSLTVATDGSLLCAANNRGNVFVWTLSQGLERT 195
Query: 298 VIKK--EINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY------RKGSAL-----AI 344
+ + + I+ + PD K AT D +I+ + G A+ A
Sbjct: 196 IATAMTQFSAHDQYITRVLLSPDVKKLATCSADHTAKIWEVDVEPTLQAGKAVPFELEAT 255
Query: 345 LKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
L H +FS+D + +A D LWEL
Sbjct: 256 LANHQRWVWDCAFSADSAYLVTACSDHYARLWEL 289
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 92 (37.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 33/152 (21%), Positives = 69/152 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL-D 291
+ G D + VWD+R +T ++ H + + +S+ + ++ G D K+ ++++
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMT-LEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRP 253
Query: 292 HSTGSCVIK----KEINLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYRKGSALAILK 346
++ + +K + N E+ + S PD +K+ A + DR V I++ + L
Sbjct: 254 YAPQNRCVKIFEGHQHNFEK-NLLKCSWSPDGTKVTAGSS-DRMVHIWDTTSRRTIYKLP 311
Query: 347 YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H + N F ++ S S D + L E+
Sbjct: 312 GHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 33/149 (22%), Positives = 62/149 (41%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV-LCLSIDESCNGGISGGADQKIVLYNLD 291
+++ D ++ WD+ G + M H V C ISG D L+++
Sbjct: 111 IVSASPDKTVRAWDVET-GKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM- 168
Query: 292 HSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
G+ + ++ I+ S + T G D V++++ RKG A L+ H T
Sbjct: 169 RQRGAI----QTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDT 224
Query: 352 CNAVSFSSDCKLMASASEDSTVALWELYP 380
+S S D + + D+ + +W++ P
Sbjct: 225 ITGMSLSPDGSYLLTNGMDNKLCVWDMRP 253
Score = 87 (35.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 22/92 (23%), Positives = 42/92 (45%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVSVATG 71
VL+GH+ ++ D+ + + + + +R WD + + HS+ + G
Sbjct: 91 VLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRG 150
Query: 72 PSIGLNKVISQGRDGTVKCWDI-ENGGLSSNP 102
P + +IS DGT K WD+ + G + + P
Sbjct: 151 PPL----IISGSDDGTAKLWDMRQRGAIQTFP 178
Score = 82 (33.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/87 (24%), Positives = 41/87 (47%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P+ +L GH ++V + F+ ++ +G+ E+ +W H + V +
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRV--HGDCKNFMVLKGHKNAILDL 102
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIENG 96
S G ++++S D TV+ WD+E G
Sbjct: 103 HWTSDG-SQIVSASPDKTVRAWDVETG 128
Score = 78 (32.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 17 HRASVTDVC-FHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
H + V C + P++ +G+ G ++WD Q + + + I +V+ S
Sbjct: 137 HSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQT---FPDKYQITAVSF--SDA 191
Query: 76 LNKVISQGRDGTVKCWDIENG 96
+K+ + G D VK WD+ G
Sbjct: 192 ADKIFTGGVDNDVKVWDLRKG 212
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 135 (52.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 38/151 (25%), Positives = 67/151 (44%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEP-----VLCLSIDESCNGGISGGADQKIVL 287
+++ +DG ++VWD T KVH P V+ + S N GG D +
Sbjct: 70 LVSASQDGKLIVWDT------YTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSI 123
Query: 288 YNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY 347
YNL G+ + +E++ +S D+ I ++G D +++ G +
Sbjct: 124 YNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIVTSSG-DTTCALWDIETGQQKTVFLG 182
Query: 348 HHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H C +++ S D KL S + D+T LW++
Sbjct: 183 HTGDCMSLAVSPDFKLFISGACDATAKLWDV 213
Score = 95 (38.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 43/192 (22%), Positives = 75/192 (39%)
Query: 201 SCGGSPNFSS----KGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL---------VWDI 247
+CGG N S K R + V L S G+++ +D SI+ +WDI
Sbjct: 113 ACGGLDNMCSIYNLKTREGNVKVSREL-SAHTGYLSCCRFLDDNSIVTSSGDTTCALWDI 171
Query: 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 307
G T H + L++ ISG D L+ D G+C ++ +
Sbjct: 172 ET-GQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLW--DVREGTC--RQTFSGHE 226
Query: 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN--AVSFSSDCKLMA 365
I+ P+ + T D R+++ R L + + C +V+FS +L+
Sbjct: 227 SDINAICFFPNGEAICTGSDDATCRLFDLRADQELIVYSHESIICGITSVAFSRSGRLLL 286
Query: 366 SASEDSTVALWE 377
+ +D +W+
Sbjct: 287 AGYDDFNCNIWD 298
Score = 93 (37.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 25/114 (21%), Positives = 55/114 (48%)
Query: 266 CLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG-ISGTSIRPDSKIAAT 324
C +D+ N ++ D L++++ TG +K + L G ++ PD K+ +
Sbjct: 149 CRFLDD--NSIVTSSGDTTCALWDIE--TGQ---QKTVFLGHTGDCMSLAVSPDFKLFIS 201
Query: 325 AGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
D ++++ R+G+ H + NA+ F + + + + S+D+T L++L
Sbjct: 202 GACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDL 255
Score = 71 (30.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS-----SSWVHSAAHGIVS- 67
LRGH A + + + +L + + G+L +WDT V SSWV + A+
Sbjct: 51 LRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 68 -VATGPSIGLNKVIS----QGRDGTVK 89
VA G GL+ + S + R+G VK
Sbjct: 111 FVACG---GLDNMCSIYNLKTREGNVK 134
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 137 (53.3 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312
PL HL V C + N +G AD+ + L+ D G+CV + + I
Sbjct: 617 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW--DVLNGNCV--RIFTGHKGPIHS 672
Query: 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST 372
+ P+ + AT D RV +++ G + LK H T ++ FS D +++AS S D+T
Sbjct: 673 LTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 732
Query: 373 VALWE 377
V LW+
Sbjct: 733 VRLWD 737
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L+ EDG++ +W ++ L K H PV +SGG D+ L+ DH
Sbjct: 556 LLSSSEDGTVRLWSLQTFTC-LVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH 614
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ + ++ T P+S AT DR VR+++ G+ + I H
Sbjct: 615 YQPLRIFAGHL----ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPI 670
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
++++FS + + +A+ + D V LW++
Sbjct: 671 HSLTFSPNGRFLATGATDGRVLLWDI 696
Score = 48 (22.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 77 NKVISQGRDGTVKCWDIE 94
N ++S DGTV+ W ++
Sbjct: 554 NYLLSSSEDGTVRLWSLQ 571
Score = 47 (21.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIW 45
+L GH V F + L + + G +R+W
Sbjct: 536 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW 568
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 137 (53.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312
PL HL V C + N +G AD+ + L+ D G+CV + + I
Sbjct: 619 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW--DVLNGNCV--RIFTGHKGPIHS 674
Query: 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST 372
+ P+ + AT D RV +++ G + LK H T ++ FS D +++AS S D+T
Sbjct: 675 LTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 734
Query: 373 VALWE 377
V LW+
Sbjct: 735 VRLWD 739
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L+ EDG++ +W ++ L K H PV +SGG D+ L+ DH
Sbjct: 558 LLSSSEDGTVRLWSLQTFTC-LVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH 616
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ + ++ T P+S AT DR VR+++ G+ + I H
Sbjct: 617 YQPLRIFAGHL----ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPI 672
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
++++FS + + +A+ + D V LW++
Sbjct: 673 HSLTFSPNGRFLATGATDGRVLLWDI 698
Score = 48 (22.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 77 NKVISQGRDGTVKCWDIE 94
N ++S DGTV+ W ++
Sbjct: 556 NYLLSSSEDGTVRLWSLQ 573
Score = 47 (21.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIW 45
+L GH V F + L + + G +R+W
Sbjct: 538 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW 570
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 137 (53.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312
PL HL V C + N +G AD+ + L+ D G+CV + + I
Sbjct: 619 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW--DVLNGNCV--RIFTGHKGPIHS 674
Query: 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST 372
+ P+ + AT D RV +++ G + LK H T ++ FS D +++AS S D+T
Sbjct: 675 LTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 734
Query: 373 VALWE 377
V LW+
Sbjct: 735 VRLWD 739
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L+ EDG++ +W ++ L K H PV +SGG D+ L+ DH
Sbjct: 558 LLSSSEDGTVRLWSLQTFTC-LVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH 616
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ + ++ T P+S AT DR VR+++ G+ + I H
Sbjct: 617 YQPLRIFAGHL----ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPI 672
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
++++FS + + +A+ + D V LW++
Sbjct: 673 HSLTFSPNGRFLATGATDGRVLLWDI 698
Score = 48 (22.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 77 NKVISQGRDGTVKCWDIE 94
N ++S DGTV+ W ++
Sbjct: 556 NYLLSSSEDGTVRLWSLQ 573
Score = 47 (21.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIW 45
+L GH V F + L + + G +R+W
Sbjct: 538 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW 570
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 137 (53.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312
PL HL V C + N +G AD+ + L+ D G+CV + + I
Sbjct: 620 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW--DVLNGNCV--RIFTGHKGPIHS 675
Query: 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST 372
+ P+ + AT D RV +++ G + LK H T ++ FS D +++AS S D+T
Sbjct: 676 LTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 735
Query: 373 VALWE 377
V LW+
Sbjct: 736 VRLWD 740
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L+ EDG++ +W ++ L K H PV +SGG D+ L+ DH
Sbjct: 559 LLSSSEDGTVRLWSLQTFTC-LVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH 617
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ + ++ T P+S AT DR VR+++ G+ + I H
Sbjct: 618 YQPLRIFAGHL----ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPI 673
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
++++FS + + +A+ + D V LW++
Sbjct: 674 HSLTFSPNGRFLATGATDGRVLLWDI 699
Score = 48 (22.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 77 NKVISQGRDGTVKCWDIE 94
N ++S DGTV+ W ++
Sbjct: 557 NYLLSSSEDGTVRLWSLQ 574
Score = 47 (21.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIW 45
+L GH V F + L + + G +R+W
Sbjct: 539 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW 571
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 101 (40.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 39/132 (29%), Positives = 60/132 (45%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVI-----KKEINLER 307
P+ + H V + D S S D + ++++ T CV KEI +
Sbjct: 350 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDT--CVHDLQAHSKEIYTIK 407
Query: 308 --PGISGTSIRPDSKIA-ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM 364
P GTS P+S I A+A +D VR+++ +G + L H +V+FS D K +
Sbjct: 408 WSPTGPGTS-NPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYL 466
Query: 365 ASASEDSTVALW 376
AS S D V +W
Sbjct: 467 ASGSFDKCVHIW 478
Score = 82 (33.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW------VHS 60
PP+ VLRGH + V ++ +L +G+ RIW+ ++ S+ +
Sbjct: 167 PPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIRE 226
Query: 61 AAHGIVSVATGPSIGLNK---VISQGR-DGTVKCWDIENGGLSS 100
H + S S+ N +++ G DG + W E+G L+S
Sbjct: 227 GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLAS 269
>UNIPROTKB|Q6PAX7 [details] [associations]
symbol:wdr1-b "WD repeat-containing protein 1-B"
species:8355 "Xenopus laevis" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005884 "actin filament"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0030043 "actin filament fragmentation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003779
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005884
GO:GO:0030043 HSSP:Q02793 HOVERGEN:HBG000780 EMBL:BC060007
RefSeq:NP_001083198.1 UniGene:Xl.4586 ProteinModelPortal:Q6PAX7
GeneID:398797 KEGG:xla:398797 CTD:398797 Xenbase:XB-GENE-865912
Uniprot:Q6PAX7
Length = 607
Score = 95 (38.5 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 31/111 (27%), Positives = 54/111 (48%)
Query: 274 NGGIS-GGADQKIVLYNLDHSTGSCVIKKEINLERPG-ISGTSIRPDSKIAATAGWDRRV 331
+G +S GGAD K+ LY++ G+ + + L G ++ + PD A ++ V
Sbjct: 457 SGTVSVGGADGKVHLYSIQ---GNSLKDEGKTLPAKGAVTDLAYSPDGAFLAVTDANKVV 513
Query: 332 RIYNYRKGSALAILKY-HHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381
+++ G + Y HHA +V++S D + AS+ D V +W L P
Sbjct: 514 TVFSVADGYSEHNSYYGHHAKALSVAWSPDNEHFASSGMDMMVYVWTLSDP 564
Score = 74 (31.1 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 35 AGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD--GTVKCWD 92
+G T G+LRIWDT Q + A I +A V+ +GR+ G+V WD
Sbjct: 75 SGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGSVFLWD 134
Score = 55 (24.4 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDES 272
G I D NP P +K H + + C+++D+S
Sbjct: 299 GYINYLDKNNPAKPFRIIKGHNKSIQCMTVDKS 331
Score = 55 (24.4 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 25/90 (27%), Positives = 37/90 (41%)
Query: 6 PPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH-- 63
PP + H V V F L + G++ ++D V S S AH
Sbjct: 177 PPFKFKFTMSDHSRFVNCVRFSPDGSRLASAGADGQIFLYDGKTGEKVCSLG-GSKAHDG 235
Query: 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDI 93
GI +V+ P G +++S D T K WD+
Sbjct: 236 GIYAVSWSPD-G-TQLLSASGDKTAKIWDV 263
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 135 (52.6 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 38/148 (25%), Positives = 65/148 (43%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG + +WD+ G H + VL ++ +S D+ I L+N +
Sbjct: 79 LSGSWDGELRLWDLAT-GESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN---T 134
Query: 294 TGSCVIK-KEINLERPGISGTSIRPDSKIAA--TAGWDRRVRIYNYRKGSALAILKYHHA 350
G C E + + +S P++ + +A WD+ V+++N + L H
Sbjct: 135 LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSG 194
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D + LW+L
Sbjct: 195 YLNTVAVSPDGSLCASGGKDGVILLWDL 222
Score = 88 (36.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
+ GH V DV +G+ GELR+WD + H+ ++SVA S
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTK--DVLSVAF--S 114
Query: 74 IGLNKVISQGRDGTVKCWD 92
+++S RD T+K W+
Sbjct: 115 TDNRQIVSASRDRTIKLWN 133
Score = 76 (31.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 27/149 (18%), Positives = 71/149 (47%)
Query: 233 VLAGYEDGSILVWD-IRNPGIPLTAMKVHLEPVLCLSIDESCNGG--ISGGADQKIVLYN 289
+++ D +I +W+ + ++ H E V C+ + +S D+ + ++N
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
L + C ++ + ++ ++ PD + A+ G D + +++ +G L L+
Sbjct: 180 LQN----CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG- 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ +++ FS + + +A+E+S + +W+L
Sbjct: 235 SIIHSLCFSPNRYWLCAATENS-IRIWDL 262
Score = 38 (18.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 10/49 (20%), Positives = 21/49 (42%)
Query: 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHF 113
+ ++AT P + +++ RD ++ W + S + T HF
Sbjct: 18 VTAIAT-PVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHF 65
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 134 (52.2 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 48/169 (28%), Positives = 81/169 (47%)
Query: 213 RGMCMAVQA--YLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM-KVHLEPVLCLSI 269
RG C V + +L S S G +L+ ED SI WD+R+ T + + H PV L I
Sbjct: 339 RGHCGPVYSTRFL-SDSSG---LLSCSEDMSIRYWDLRS--FTNTVLYQGHAYPVWDLDI 392
Query: 270 DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR 329
S D+ L++ D + + + L+ + P+S AT D+
Sbjct: 393 SPCSLYFASASHDRTARLWSFDRTYPLRIYAGHL-LD---VDCVKFHPNSNYLATGSTDK 448
Query: 330 RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
VR+++ ++G+++ + H A++FS + K +ASA ED + LW+L
Sbjct: 449 TVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDL 497
Score = 133 (51.9 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 36/140 (25%), Positives = 68/140 (48%)
Query: 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV 298
D + +W PL HL V C+ + N +G D+ + L++ G+ V
Sbjct: 405 DRTARLWSFDRT-YPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQ--GNSV 461
Query: 299 IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFS 358
+ R + + P+ K A+AG D+R+++++ G+ L+ H +++FS
Sbjct: 462 --RLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 519
Query: 359 SDCKLMASASEDSTVALWEL 378
D L+ASAS D++V +W++
Sbjct: 520 PDSSLIASASMDNSVRVWDI 539
Score = 47 (21.6 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 20/77 (25%), Positives = 31/77 (40%)
Query: 77 NKVISQGRDGT-VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDC 135
+K+++ G D + VK W + + L S P L + C + L +E + E K
Sbjct: 280 SKLLAAGFDNSCVKLWSLRSKKLKSEPHLVDVSRIRLACDI-LDEEEEEDDSAGTEMK-I 337
Query: 136 YEREVGETVDTDSLCDS 152
G T L DS
Sbjct: 338 LRGHCGPVYSTRFLSDS 354
Score = 40 (19.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 18/83 (21%), Positives = 33/83 (39%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVSVATG 71
+LRGH V F L + + +R WD R+ +++ ++ A+ + +
Sbjct: 337 ILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDL---RSFTNTVLYQGHAYPVWDLDIS 393
Query: 72 PSIGLNKVISQGRDGTVKCWDIE 94
P L S D T + W +
Sbjct: 394 PC-SLY-FASASHDRTARLWSFD 414
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 120 (47.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 36/143 (25%), Positives = 67/143 (46%)
Query: 238 EDGSILVWDIRNP-GIPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG 295
+D SI VWD+ +P I L + V H V + D+ +S D+ I ++N T
Sbjct: 401 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI--VSASGDRTIKVWN----TS 454
Query: 296 SCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAV 355
+C + +N + GI+ R ++ + D +R+++ G+ L +L+ H +
Sbjct: 455 TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 512
Query: 356 SFSSDCKLMASASEDSTVALWEL 378
F D K + S + D + +W+L
Sbjct: 513 RF--DNKRIVSGAYDGKIKVWDL 533
Score = 116 (45.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 34/147 (23%), Positives = 68/147 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLD 291
++ G D ++ VWD+ N G L + H E VL L + NG ++ D+ I ++++
Sbjct: 356 IITGSSDSTVRVWDV-NAGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMA 411
Query: 292 HSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
T +++ + R ++ D K +A DR ++++N + L H
Sbjct: 412 SPT-DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 468
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
+ + +L+ S S D+T+ LW++
Sbjct: 469 IACLQYRD--RLVVSGSSDNTIRLWDI 493
Score = 63 (27.2 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 15/81 (18%), Positives = 39/81 (48%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
+L GH SV +C + ++ G++ +R+WD V + ++ +H ++ +
Sbjct: 338 ILTGHTGSV--LCLQYDERVIITGSSDSTVRVWD-VNAGEMLNTLIHHC-EAVLHLRFNN 393
Query: 73 SIGLNKVISQGRDGTVKCWDI 93
+ +++ +D ++ WD+
Sbjct: 394 GM----MVTCSKDRSIAVWDM 410
Score = 49 (22.3 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 78 KVISQGRDGTVKCWD 92
K++S RD T+K WD
Sbjct: 315 KIVSGLRDNTIKIWD 329
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 175 VAGEQLSEVEIWDLNTAERC-TRLH 198
+ G S V +WD+N E T +H
Sbjct: 357 ITGSSDSTVRVWDVNAGEMLNTLIH 381
Score = 44 (20.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRL 197
V+G + + ++IWD +T E C R+
Sbjct: 317 VSGLRDNTIKIWDKSTLE-CKRI 338
>UNIPROTKB|Q92636 [details] [associations]
symbol:NSMAF "Protein FAN" species:9606 "Homo sapiens"
[GO:0005057 "receptor signaling protein activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006672 "ceramide
metabolic process" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Pfam:PF02893 GO:GO:0005737 GO:GO:0006672 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0005057
Pathway_Interaction_DB:tnfpathway InterPro:IPR004182 SMART:SM00568
EMBL:CH471068 Gene3D:1.10.1540.10 Gene3D:2.30.29.40
InterPro:IPR000409 InterPro:IPR023362 Pfam:PF02138 SMART:SM01026
SUPFAM:SSF81837 PROSITE:PS50197 EMBL:X96586 EMBL:AK294009
EMBL:AC068522 EMBL:AC092700 EMBL:BC041124 IPI:IPI00328260
RefSeq:NP_001138244.1 RefSeq:NP_003571.2 UniGene:Hs.372000
ProteinModelPortal:Q92636 SMR:Q92636 IntAct:Q92636
MINT:MINT-2813141 STRING:Q92636 PhosphoSite:Q92636 DMDM:209572614
PaxDb:Q92636 PRIDE:Q92636 Ensembl:ENST00000038176
Ensembl:ENST00000427130 GeneID:8439 KEGG:hsa:8439 UCSC:uc003xtt.3
CTD:8439 GeneCards:GC08M059496 H-InvDB:HIX0007527 HGNC:HGNC:8017
HPA:HPA023067 HPA:HPA023148 HPA:HPA023151 MIM:603043
neXtProt:NX_Q92636 PharmGKB:PA31795 HOGENOM:HOG000231605
HOVERGEN:HBG005639 InParanoid:Q92636 OMA:DKNRFQS OrthoDB:EOG4M91QQ
PhylomeDB:Q92636 ChiTaRS:NSMAF GenomeRNAi:8439 NextBio:31574
ArrayExpress:Q92636 Bgee:Q92636 CleanEx:HS_NSMAF
Genevestigator:Q92636 GermOnline:ENSG00000035681 Uniprot:Q92636
Length = 917
Score = 104 (41.7 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291
+VL+G + G +LVWD+ I ++ H V C+ ++E C+ I+GG D++I+ + L
Sbjct: 858 SVLSGSQSGELLVWDLLGAKIS-ERIQGHTGAVTCIWMNEQCSSIITGGEDRQIIFWKLQ 916
Query: 292 H 292
+
Sbjct: 917 Y 917
Score = 84 (34.6 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/93 (31%), Positives = 41/93 (44%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
D +A L H SV + + +L +GT G + IWD + HS GIV
Sbjct: 755 DLLAELE-HDVSVDTISLNAASTLLVSGTKEGTVNIWDLTTATLMHQIPCHS---GIVC- 809
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN 101
T S V+S G DG + D++ G L S+
Sbjct: 810 DTAFSPDSRHVLSTGTDGCLNVIDVQTGMLISS 842
Score = 72 (30.4 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH----SAAHGIVSVA 69
L GH +V+ +C+H + L++ + +++W V + H + VSV
Sbjct: 710 LMGHDDAVSKICWHDNR--LYSASWDSTVKVWSGVPAEMPGTKRHHFDLLAELEHDVSVD 767
Query: 70 TGPSIGLNK----VISQGRDGTVKCWDIENGGL 98
T I LN ++S ++GTV WD+ L
Sbjct: 768 T---ISLNAASTLLVSGTKEGTVNIWDLTTATL 797
Score = 62 (26.9 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 162 IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSC 202
+D + + V+G + V IWDL TA T +HQ C
Sbjct: 766 VDTISLNAASTLLVSGTKEGTVNIWDLTTA---TLMHQIPC 803
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 130 (50.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 39/149 (26%), Positives = 65/149 (43%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG + +WD+ G+ H + VL ++ +S D+ I L+N +
Sbjct: 79 LSGSWDGELRLWDLA-AGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN---T 134
Query: 294 TGSC--VIKKEINLERPGISGTSIRPDS--KIAATAGWDRRVRIYNYRKGSALAILKYHH 349
G C I + R +S P++ +A WD+ V+++N + L H
Sbjct: 135 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT 194
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ V+ S D L AS +D V LW+L
Sbjct: 195 GYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Score = 92 (37.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH V DV +G+ GELR+WD VS+ ++SVA S
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAG--VSTRRFVGHTKDVLSVAF--S 114
Query: 74 IGLNKVISQGRDGTVKCWD 92
+ +++S RD T+K W+
Sbjct: 115 LDNRQIVSASRDRTIKLWN 133
Score = 80 (33.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/102 (21%), Positives = 52/102 (50%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+S D+ + ++NL + C ++ + +S ++ PD + A+ G D V +++
Sbjct: 168 VSASWDKTVKVWNLSN----CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+G L L+ + + +A+ FS + + +A+E + +W+L
Sbjct: 224 AEGKKLYSLEAN-SVIHALCFSPNRYWLCAATEHG-IKIWDL 263
Score = 43 (20.2 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 162 IDDVPAEGPKYMAVAGEQLSEVEIWDL 188
++DV A++G E+ +WDL
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDL 92
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 136 (52.9 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312
PL HL V C + N +G AD+ + L+ D G+CV + + I
Sbjct: 620 PLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLW--DVLNGNCV--RIFTGHKGPIHS 675
Query: 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST 372
+ P+ + AT D RV +++ G + LK H T ++ FS D +++AS S D+T
Sbjct: 676 LTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 735
Query: 373 VALWE 377
V LW+
Sbjct: 736 VRLWD 740
Score = 132 (51.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+L+ EDG++ +W ++ L K H PV +SGG D+ L+ DH
Sbjct: 559 LLSSSEDGTVRLWSLQTFTC-LVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH 617
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ + ++ T P+S AT DR VR+++ G+ + I H
Sbjct: 618 YQPLRIFAGHL----ADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPI 673
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
++++FS + + +A+ + D V LW++
Sbjct: 674 HSLTFSPNGRFLATGATDGRVLLWDI 699
Score = 48 (22.0 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 77 NKVISQGRDGTVKCWDIE 94
N ++S DGTV+ W ++
Sbjct: 557 NYLLSSSEDGTVRLWSLQ 574
Score = 47 (21.6 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIW 45
+L GH V F + L + + G +R+W
Sbjct: 539 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW 571
>RGD|1307578 [details] [associations]
symbol:Mapkbp1 "mitogen activated protein kinase binding protein
1" species:10116 "Rattus norvegicus" [GO:0007256 "activation of
JNKK activity" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1307578 Gene3D:2.130.10.10
SUPFAM:SSF50978 GeneTree:ENSGT00620000087755 IPI:IPI00373672
ProteinModelPortal:D3ZSY0 Ensembl:ENSRNOT00000009430
UCSC:RGD:1307578 Uniprot:D3ZSY0
Length = 1501
Score = 107 (42.7 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 30/104 (28%), Positives = 52/104 (50%)
Query: 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR----PDSKIAATAGWDRRVRIY 334
G D+ I ++N+ S+G +K++ G GT I+ P AT+ D+ + I+
Sbjct: 629 GCQDRNIRIFNI--SSGK---QKKLFKGSQGEDGTLIKVQTDPSGIYIATSCSDKNLSIF 683
Query: 335 NYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
++ G +A + H + FS+DCK + S S DS + +W L
Sbjct: 684 DFFSGECVATMFGHSEIVTGMKFSNDCKHLISVSGDSCIFVWRL 727
Score = 73 (30.8 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 20/81 (24%), Positives = 32/81 (39%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGG--ELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+L R ++T + F L G +G +R+WD + V+ H +G+ VA
Sbjct: 86 ILNSSRKTITALAFSPDGKYLVTGESGHMPAVRVWDVAERNQVAELQEHK--YGVACVAF 143
Query: 71 GPSIGLNKVISQGRDGTVKCW 91
PS + D V W
Sbjct: 144 SPSAKYIVSVGYQHDMIVNVW 164
Score = 55 (24.4 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 237 YEDGSILVWDIRNP 250
Y D SI VWD+R+P
Sbjct: 358 YNDHSIYVWDVRDP 371
>ASPGD|ASPL0000068374 [details] [associations]
symbol:AN7705 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001304 EMBL:AACD01000131
HOGENOM:HOG000174258 KO:K13137 RefSeq:XP_680974.1
ProteinModelPortal:Q5AVH5 STRING:Q5AVH5
EnsemblFungi:CADANIAT00000837 GeneID:2869479 KEGG:ani:AN7705.2
OMA:LFDFHTG OrthoDB:EOG4PRX0H Uniprot:Q5AVH5
Length = 340
Score = 124 (48.7 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 40/152 (26%), Positives = 70/152 (46%)
Query: 232 NVLA-GYEDGSILVWDIRNPGIPLTAMKVHLEPVLC----LSIDESCNGGISGGADQKIV 286
N+L +D I WD+R+ P+ V C L+ + G +S A + +
Sbjct: 184 NILTTAADDRKIRWWDLRSRH-PVVEYPVEGNIGSCELNTLATRPNDTGILSVAAGKSVY 242
Query: 287 LYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KIAATAGWDRRVRIYNYRKGSALAIL 345
L++ H+ G + K + E ++ ++ D+ ++ + D R+Y+ L +
Sbjct: 243 LFD-GHTPGRLLKKIDFGYE---VASAAVNNDTARLVTGSADDTWARVYDLHTDDELEVQ 298
Query: 346 KYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
K HH +VSFS D KL + SED T+ LW+
Sbjct: 299 KGHHGPIWSVSFSPDGKLYGTGSEDGTIKLWK 330
Score = 50 (22.7 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 21/98 (21%), Positives = 40/98 (40%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHG-IVS 67
D + GH+ +V I ++WDT H + +H+ H IV
Sbjct: 54 DWIGTFLGHKGAVWQARLSTDANIAATAAADFSAKVWDT--H---TGQCLHTLQHSHIVR 108
Query: 68 VATGPSIGLNKVISQGR-DGTVKCWDI-ENGGLSSNPS 103
P +V++ G + ++ +D+ +G SS+P+
Sbjct: 109 AVAFPLQPSPQVLATGGYEKKLRIFDLTRSGSNSSSPT 146
Score = 43 (20.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 26/78 (33%), Positives = 34/78 (43%)
Query: 17 HRASVTDVCFH-QTKPILFAGTTGG---ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
H V V F Q P + A TGG +LRI+D + + SSS S+A G
Sbjct: 103 HSHIVRAVAFPLQPSPQVLA--TGGYEKKLRIFDLTRSGSNSSSPTASSAP---PAEDGT 157
Query: 73 SIGLNKVISQG-RDGTVK 89
S + I G GT+K
Sbjct: 158 SSATSYEIGPGAHGGTIK 175
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 138 (53.6 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 43/152 (28%), Positives = 68/152 (44%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI--SGGADQKIVLYNL 290
++AG + GSI VWD+ I L + H + +C S+D G SG D I L+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKI-LRTLLGH-KANIC-SLDFHPYGSFVASGSLDTDIKLWDV 134
Query: 291 DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
C+ K + + + + PD K A+A D V++++ G + H
Sbjct: 135 RRK--GCIFKYKSHTQ--AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSG 190
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWELYPPH 382
N V F L+AS S D T+ W+L H
Sbjct: 191 PVNVVEFHPSEYLLASGSSDRTIRFWDLEKFH 222
Score = 129 (50.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 37/160 (23%), Positives = 71/160 (44%)
Query: 219 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS 278
V + + KS G + + G +D + VW + P ++ + H P+ L I ++
Sbjct: 23 VSSLVLGKSTGRL-LATGGDDCRVNVWSVNKPNCVMS-LTGHTTPIESLQISAKEELIVA 80
Query: 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338
G I +++L+ + I + + + I P A+ D +++++ R+
Sbjct: 81 GSQSGSIRVWDLE----AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRR 136
Query: 339 GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ K H + FS D K +ASA++D TV LW+L
Sbjct: 137 KGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 96 (38.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 33/146 (22%), Positives = 57/146 (39%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V +G D I +WD+R G + K H + V CL S D + L++L
Sbjct: 120 VASGSLDTDIKLWDVRRKGC-IFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDL-- 176
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
T V+ + P ++ P + A+ DR +R ++ K ++ ++
Sbjct: 177 -TAGKVMFEFTGHSGP-VNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPV 234
Query: 353 NAVSFSSD-CKLMASASEDSTVALWE 377
+ F+ D C L + V WE
Sbjct: 235 RCILFNPDGCCLYGGFQDSLRVYGWE 260
Score = 85 (35.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/90 (26%), Positives = 40/90 (44%)
Query: 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS 67
P+ V L GH + + + ++ AG+ G +R+WD + + + H A I S
Sbjct: 53 PNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKA--NICS 110
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGG 97
+ P G + V S D +K WD+ G
Sbjct: 111 LDFHP-YG-SFVASGSLDTDIKLWDVRRKG 138
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 96 (38.9 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 36/142 (25%), Positives = 59/142 (41%)
Query: 238 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC 297
ED SI VW++ L ++ H V C +S D+ I ++ D + C
Sbjct: 122 EDKSIKVWNMYRQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQC 178
Query: 298 VIKKEINLERPGISG-TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVS 356
V + G + + P+ A+AG D V+I++ R L + H N VS
Sbjct: 179 VNNFS---DFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS 235
Query: 357 FSSDCKLMASASEDSTVALWEL 378
F + +AS D T+ + +L
Sbjct: 236 FHPSGNYLITASSDGTLKILDL 257
Score = 90 (36.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 31/140 (22%), Positives = 59/140 (42%)
Query: 238 EDGSILVWDIRNPG-IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGS 296
ED +I +WD N + + V + + + +C S G+D + ++++ +
Sbjct: 164 EDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIA--SAGSDHTVKIWDIRVNK-- 219
Query: 297 CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVS 356
+ + + G++ S P TA D ++I + +G + L+ H VS
Sbjct: 220 --LLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277
Query: 357 FSSDCKLMASASEDSTVALW 376
FS +L S D+ V LW
Sbjct: 278 FSKGGELFTSGGADAQVLLW 297
Score = 85 (35.0 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 7 PPDPVA--VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HSAAH 63
P DPV +GH+A++T V F L G+ L +W +++ + + +V H
Sbjct: 5 PEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLW-SLRPQARAFRYVGHKDV- 62
Query: 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSS 100
I SV P +G N + S RD T++ W + G SS
Sbjct: 63 -ITSVQFSP-LG-NLLASASRDRTIRLWIPDKRGKSS 96
Score = 75 (31.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI 74
+ H A V V F L + + +++W+ + R + S + H+ H + P
Sbjct: 99 KAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHT--HWVRCAKFSPDG 156
Query: 75 GLNKVISQGRDGTVKCWDIEN 95
L ++S D T+K WD N
Sbjct: 157 RL--IVSCSEDKTIKIWDTTN 175
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 124 (48.7 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 35/148 (23%), Positives = 63/148 (42%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
++ G +DG I VWD+ N G + H V L + N S D + ++L
Sbjct: 354 IITGADDGKIKVWDM-NSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIR 412
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR-RVRIYNYRKGSALAILKYHHAT 351
++ S ++ P +I D + +++ + G L L H
Sbjct: 413 YRNFRTFTAPSRVQ---FSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGP 469
Query: 352 CNAVSFSSDCKLMASASEDSTVALWELY 379
+++SF+S L+AS S D TV +W+++
Sbjct: 470 VSSLSFNSSGSLLASGSWDKTVRIWDIF 497
Score = 58 (25.5 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 40 GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96
G+L +W+ V H A +S S G ++I+ DG +K WD+ +G
Sbjct: 319 GQLLVWEWQSESYVLKQQSHYDA---LSTLQYSSDG-QRIITGADDGKIKVWDMNSG 371
Score = 43 (20.2 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIW 45
P A L GH+ +V F + + ++ + G L +W
Sbjct: 183 PCA-LTGHKNTVVSGFFSKDQQTIYTVSKDGALFVW 217
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 102 (41.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 31/149 (20%), Positives = 64/149 (42%)
Query: 239 DGSILVWDIRNPGIPLTA-MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL-DHSTGS 296
D ++ +WD R+ A ++ H V +S +S + D+ + ++ +
Sbjct: 81 DATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKSVWIWEVAQEDEYE 140
Query: 297 CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG----SALAILKYHHATC 352
C +N + P+ + A+A +D +++Y S+ L H +T
Sbjct: 141 CAAV--LNTHSQDVKKVEWHPNEDVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTV 198
Query: 353 NAVSFSSDCKLMASASEDSTVALWELYPP 381
+++F + +AS S+D TV +W+ Y P
Sbjct: 199 WSIAFDASGSRLASCSDDQTVRIWQEYKP 227
Score = 74 (31.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 31/94 (32%), Positives = 38/94 (40%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIW-DTVQHRTVSSSWVHSAAHG--IVSVAT 70
L GHR V +H P+L +RIW D R V + V S H I VA
Sbjct: 10 LSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKT-VLSDGHTRTIRDVAW 68
Query: 71 GPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSL 104
P G + S D TV WD +G N +L
Sbjct: 69 SPC-G-RFLASASFDATVAIWDRRSGEFECNATL 100
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 137 (53.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 37/127 (29%), Positives = 69/127 (54%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIV-LYNLDHSTGSCVIKKEINLERPGIS 311
P+ +++ H + V S C I+ ++ K L++L+ S G C++ +E + + G+
Sbjct: 379 PILSLEGHSDVVNRCSF-HPCGRYITTSSNDKSWRLWDLE-SGGKCLLDQEGHSD--GVM 434
Query: 312 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS 371
G SI+ D + AT D VRI++ R G + + H +V +S + +AS+SED+
Sbjct: 435 GISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPNGYQLASSSEDN 494
Query: 372 TVALWEL 378
TV +W++
Sbjct: 495 TVVIWDI 501
Score = 100 (40.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 37/159 (23%), Positives = 74/159 (46%)
Query: 232 NVLA-GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG--ISGGADQKIVLY 288
++LA G +DG + +WD+R+ G P+ + H + V+ S+D S NG S D +V++
Sbjct: 443 SLLATGSQDGLVRIWDLRS-GRPILYFQGHSKQVI--SVDWSPNGYQLASSSEDNTVVIW 499
Query: 289 NLDHSTGSCVIKKE------INLERPGISGTSIRPDSK-----IAATAGWDRRVRIYNYR 337
++ SC I + ++ + +S AT +D +++ ++
Sbjct: 500 DIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKIKTWSPN 559
Query: 338 KGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
S LA + H + ++ ++ K++ S S D T +W
Sbjct: 560 TWSPLATFEGHSSKVTSIDLTNS-KIL-STSFDKTWKIW 596
Score = 69 (29.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/88 (25%), Positives = 35/88 (39%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH-RTVSSSWVHSAAHGIVSV 68
P+ L GH V FH + + R+WD + + HS G++ +
Sbjct: 379 PILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHS--DGVMGI 436
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENG 96
+ L SQ DG V+ WD+ +G
Sbjct: 437 SIQSDGSLLATGSQ--DGLVRIWDLRSG 462
>UNIPROTKB|Q9NRL3 [details] [associations]
symbol:STRN4 "Striatin-4" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0051721 "protein phosphatase 2A
binding" evidence=IDA] [GO:0000159 "protein phosphatase type 2A
complex" evidence=IDA] [GO:0070016 "armadillo repeat domain
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005516 GO:GO:0051721
InterPro:IPR013258 Pfam:PF08232 HOGENOM:HOG000236343
HOVERGEN:HBG007117 EMBL:AF212940 EMBL:BC004910 EMBL:BC034604
IPI:IPI00003016 RefSeq:NP_001034966.1 RefSeq:NP_037535.2
UniGene:Hs.631590 ProteinModelPortal:Q9NRL3 SMR:Q9NRL3
IntAct:Q9NRL3 MINT:MINT-1371553 STRING:Q9NRL3 PhosphoSite:Q9NRL3
DMDM:152031693 PaxDb:Q9NRL3 PRIDE:Q9NRL3 Ensembl:ENST00000263280
GeneID:29888 KEGG:hsa:29888 UCSC:uc002pfl.3 CTD:29888
GeneCards:GC19M047222 H-InvDB:HIX0096898 HGNC:HGNC:15721
HPA:HPA043527 MIM:614767 neXtProt:NX_Q9NRL3 PharmGKB:PA134863218
PhylomeDB:Q9NRL3 ChiTaRS:STRN4 GenomeRNAi:29888 NextBio:52431
PMAP-CutDB:Q9NRL3 ArrayExpress:Q9NRL3 Bgee:Q9NRL3 CleanEx:HS_STRN4
Genevestigator:Q9NRL3 GermOnline:ENSG00000090372 Uniprot:Q9NRL3
Length = 753
Score = 138 (53.6 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 80/345 (23%), Positives = 142/345 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW------VHS-A 61
+P LR H + + FH ++ L + G L++W+ + T + +H+
Sbjct: 429 NPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFR 488
Query: 62 AH-G-IVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
AH G +++VA G + S G D + W I + LS +P + Y LS V
Sbjct: 489 AHRGPVLAVAMGSNS--EYCYSGGADACIHSWKIPD--LSMDPY-----DGYDPSVLSHV 539
Query: 120 KEPYANAKQANEPKDCYEREVGETVD-TDSLCDSKESNRSFEIIDDVPAE-G-PKYMAVA 176
E + +A +R + D T + D S+ + +E G P +A
Sbjct: 540 LEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFT 599
Query: 177 GEQLSEVEIWDLNTAERCTRLHQNSCGGSP-NFSSKGRGMCMAVQAYLPSKSQGFVNVLA 235
+ + + + + + T L+ G + S+G + + +Q +
Sbjct: 600 STEPAHI-VASFRSGD--TVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLT--IT 654
Query: 236 GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG--ISGGADQKIVLYNLDHS 293
++D I D R G P+ +M HL+ V CL++D NG +SG D + L++LD+
Sbjct: 655 AHDDRGIRFLDNRT-GKPVHSMVAHLDAVTCLAVDP--NGAFLMSGSHDCSLRLWSLDNK 711
Query: 294 TGSCVIKKEINLERP----GISGTSIRPDSKIAATAGWDRRVRIY 334
T CV +EI R I + P + A+AG D +++
Sbjct: 712 T--CV--QEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVF 752
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 103 (41.3 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 35/149 (23%), Positives = 69/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D + +W L ++ H V L D +SG D I +++++
Sbjct: 1128 IVSGAYDYMVKIWHPERQEC-LHTLQGHTNRVYSLQFDGL--HVVSGSLDTSIRVWDVE- 1183
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK---YHH 349
TG+C K + + SG +R + ++ A D V++++ G L L HH
Sbjct: 1184 -TGNC--KHTLMGHQSLTSGMELRQNILVSGNA--DSTVKVWDITTGQCLQTLSGPNKHH 1238
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + F+S + + ++S+D TV LW++
Sbjct: 1239 SAVTCLQFNS--RFVVTSSDDGTVKLWDV 1265
Score = 87 (35.7 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91
I+ +G+T L++WD S + VH+ G S + +KV+S RD T++ W
Sbjct: 1047 IIISGSTDRTLKVWDMD-----SGACVHTL-QGHTSTVRCMHLHGSKVVSGSRDATLRVW 1100
Query: 92 DIENG 96
DIE G
Sbjct: 1101 DIEQG 1105
Score = 80 (33.2 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 1 MSKRPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS 60
M+ R P VL+GH V C + + +G+ L++W V + + + H+
Sbjct: 977 MNWRSRPVRKPKVLKGHDDHVI-TCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHT 1035
Query: 61 AAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96
G+ S +I +IS D T+K WD+++G
Sbjct: 1036 G--GVWSSQMSGNI----IISGSTDRTLKVWDMDSG 1065
>UNIPROTKB|F8VYA6 [details] [associations]
symbol:STRN4 "Striatin-4" species:9606 "Homo sapiens"
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0043197
"dendritic spine" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043197 InterPro:IPR013258 Pfam:PF08232
EMBL:AC008622 EMBL:AC008635 RefSeq:NP_001034966.1 UniGene:Hs.631590
GeneID:29888 KEGG:hsa:29888 CTD:29888 HGNC:HGNC:15721 ChiTaRS:STRN4
GenomeRNAi:29888 NextBio:52431 OMA:RPHEGSF IPI:IPI00741970
ProteinModelPortal:F8VYA6 SMR:F8VYA6 PRIDE:F8VYA6
Ensembl:ENST00000391910 UCSC:uc002pfm.3 ArrayExpress:F8VYA6
Bgee:F8VYA6 Uniprot:F8VYA6
Length = 760
Score = 138 (53.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 80/345 (23%), Positives = 142/345 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW------VHS-A 61
+P LR H + + FH ++ L + G L++W+ + T + +H+
Sbjct: 436 NPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFR 495
Query: 62 AH-G-IVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
AH G +++VA G + S G D + W I + LS +P + Y LS V
Sbjct: 496 AHRGPVLAVAMGSNS--EYCYSGGADACIHSWKIPD--LSMDPY-----DGYDPSVLSHV 546
Query: 120 KEPYANAKQANEPKDCYEREVGETVD-TDSLCDSKESNRSFEIIDDVPAE-G-PKYMAVA 176
E + +A +R + D T + D S+ + +E G P +A
Sbjct: 547 LEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFT 606
Query: 177 GEQLSEVEIWDLNTAERCTRLHQNSCGGSP-NFSSKGRGMCMAVQAYLPSKSQGFVNVLA 235
+ + + + + + T L+ G + S+G + + +Q +
Sbjct: 607 STEPAHI-VASFRSGD--TVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLT--IT 661
Query: 236 GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG--ISGGADQKIVLYNLDHS 293
++D I D R G P+ +M HL+ V CL++D NG +SG D + L++LD+
Sbjct: 662 AHDDRGIRFLDNRT-GKPVHSMVAHLDAVTCLAVDP--NGAFLMSGSHDCSLRLWSLDNK 718
Query: 294 TGSCVIKKEINLERP----GISGTSIRPDSKIAATAGWDRRVRIY 334
T CV +EI R I + P + A+AG D +++
Sbjct: 719 T--CV--QEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVF 759
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 127 (49.8 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 38/160 (23%), Positives = 67/160 (41%)
Query: 221 AYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG 280
AY P S+ V+ EDG I VWDI + G L + H V + + S
Sbjct: 352 AYSPDGSR----VVTASEDGKIKVWDITS-GFCLATFEEHTSSVTAVQFAKRGQVMFSSS 406
Query: 281 ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR-RVRIYNYRKG 339
D + ++L + ER + ++ P ++ D + +++ + G
Sbjct: 407 LDGTVRAWDLIRYRN---FRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTG 463
Query: 340 SALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379
L L H + +SFS + ++ASAS D T+ +W ++
Sbjct: 464 QLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIF 503
Score = 113 (44.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 32/144 (22%), Positives = 71/144 (49%)
Query: 236 GYEDGSILVWDIRNPGIPLTA-MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 294
G+ G ++D+ P L + + PV +S++++ ++ G+ + L + +
Sbjct: 278 GFTSGEFRLYDL--PDFTLIQQLSMGQNPVNTVSVNQT-GEWLAFGSSKLGQLLVYEWQS 334
Query: 295 GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA 354
S ++K++ + + + + PD TA D ++++++ G LA + H ++ A
Sbjct: 335 ESYILKQQGHFD--STNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTA 392
Query: 355 VSFSSDCKLMASASEDSTVALWEL 378
V F+ ++M S+S D TV W+L
Sbjct: 393 VQFAKRGQVMFSSSLDGTVRAWDL 416
Score = 58 (25.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 17 HRASVTDVCFHQTKPILFAGTTGGELRIWD 46
++A V V FH +L G T GE R++D
Sbjct: 259 NQAKVKCVTFHPATRLLAVGFTSGEFRLYD 288
Score = 40 (19.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 33 LFAGTTGGELRIWDT--VQHRTVSSSWVHSAAH-GIVSVATGPSIGLNK--VISQGRDGT 87
LFA +G L+IW T V + +V H G T + + +++ +D +
Sbjct: 110 LFALASGRFLQIWKTPDVNKDRQFAPFVRHRVHAGHFQDITSLTWSQDSRFILTTSKDLS 169
Query: 88 VKCWDIEN 95
K W +++
Sbjct: 170 AKIWSVDS 177
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 107 (42.7 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 33/146 (22%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D ++ VWDI G L + H+ V C+ D +SG D + ++ D
Sbjct: 527 VVSGSRDATLRVWDIET-GQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVW--DP 581
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
T +C+ + + R S++ D + D +R+++ G+ + L H +
Sbjct: 582 ETETCLHTLQGHTNRV----YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 637
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
+ + + ++ S + DSTV +W++
Sbjct: 638 SGMELKDN--ILVSGNADSTVKIWDI 661
Score = 106 (42.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 37/147 (25%), Positives = 70/147 (47%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D + VWD L ++ H V L D +SG D I +++++
Sbjct: 567 VVSGAYDFMVKVWDPETETC-LHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVE- 622
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
TG+C+ + + SG ++ + ++ A D V+I++ + G L L+ H
Sbjct: 623 -TGNCI--HTLTGHQSLTSGMELKDNILVSGNA--DSTVKIWDIKTGQCLQTLQGPHKHQ 677
Query: 353 NAVS-FSSDCKLMASASEDSTVALWEL 378
+AV+ + + ++S+D TV LW+L
Sbjct: 678 SAVTCLQFNKNFVITSSDDGTVKLWDL 704
Score = 78 (32.5 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91
I+ +G+T L++W+ + +H+ +G S + +V+S RD T++ W
Sbjct: 486 IIISGSTDRTLKVWNAE-----TGECIHTL-YGHTSTVRCMHLHEKRVVSGSRDATLRVW 539
Query: 92 DIENG 96
DIE G
Sbjct: 540 DIETG 544
Score = 68 (29.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+ L GH ++V C H + + +G+ LR+WD + + H AA V
Sbjct: 507 IHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-D 563
Query: 71 GPSIGLNKVISQGRDGTVKCWDIE 94
G +V+S D VK WD E
Sbjct: 564 G-----RRVVSGAYDFMVKVWDPE 582
Score = 67 (28.6 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VL+GH V C + +G+ L++W V + + + H+ G+ S
Sbjct: 428 VLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG--GVWSSQMRD 484
Query: 73 SIGLNKVISQGRDGTVKCWDIENG 96
+I +IS D T+K W+ E G
Sbjct: 485 NI----IISGSTDRTLKVWNAETG 504
Score = 39 (18.8 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRLH 198
V+G + + + +WD+ T + C LH
Sbjct: 528 VSGSRDATLRVWDIETGQ-C--LH 548
>FB|FBgn0039867 [details] [associations]
symbol:CstF-50 "CstF-50" species:7227 "Drosophila
melanogaster" [GO:0005848 "mRNA cleavage stimulating factor
complex" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006379 KO:K14406
OMA:LYDHTDE GeneTree:ENSGT00700000104487 HSSP:P46680 GO:GO:0005848
FlyBase:FBgn0039867 NextBio:835499 EMBL:AY094802 RefSeq:NP_651883.1
UniGene:Dm.11654 SMR:Q9V9V0 IntAct:Q9V9V0 MINT:MINT-287008
STRING:Q9V9V0 EnsemblMetazoa:FBtr0085865 GeneID:43734
KEGG:dme:Dmel_CG2261 UCSC:CG2261-RA CTD:43734 InParanoid:Q9V9V0
GenomeRNAi:43734 Uniprot:Q9V9V0
Length = 424
Score = 134 (52.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 44/154 (28%), Positives = 76/154 (49%)
Query: 232 NVLAGYE-DGSILVWDIRNPGIPLTAMKVHL--EPVLCLSIDESCNGGISGGADQKIVLY 288
++LA DG++ ++DI P + A KV EPVLCLS + ++ G + VL
Sbjct: 179 HILASASRDGTVKLFDIAKPSVK-KAHKVFTDCEPVLCLSFHPT-GDYVAIGTEHN-VLR 235
Query: 289 NLDHSTGSCVIKKEINLE-RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY 347
D +T C + + + + G++ P K+ AT +D ++I++ G + +
Sbjct: 236 VYDVATTQCFVSAIPSQQHKAGVTCVKYSPTGKLYATGSYDGDIKIWDGISGRCINTIAE 295
Query: 348 HH---ATCNAVSFSSDCKLMASASEDSTVALWEL 378
H A C+ + F+ + K + S+ DS V LWEL
Sbjct: 296 AHGGAAICS-LEFTRNGKYLLSSGMDSLVYLWEL 328
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 121 (47.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
F +++ ED +I VWD T +K H + V +S D S S AD I L+
Sbjct: 55 FSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLW- 112
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D C+ + ++ +S +I P+ +A D+ ++++ + G + H
Sbjct: 113 -DFQGFECI--RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR 169
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALW 376
V + D L+AS S D TV +W
Sbjct: 170 EWVRMVRPNQDGTLIASCSNDQTVRVW 196
Score = 92 (37.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++ D STG C++ + + + G K + D+ +R+++Y
Sbjct: 247 LSGSRDKTIKMW--DVSTGMCLMTL-VGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + L H ++ F + + S D TV +WE
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 84 (34.6 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSA 61
P PP+ A L GHR+ VT V FH ++ + + +++WD RT+ H+
Sbjct: 31 PRPPEKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG---HTD 86
Query: 62 AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
+ + ++ S L + S D T+K WD +
Sbjct: 87 S--VQDISFDHSGKL--LASCSADMTIKLWDFQ 115
Score = 38 (18.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 246 LLSGSRDKTIKMWDV 260
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 107 (42.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 33/146 (22%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D ++ VWDI G L + H+ V C+ D +SG D + ++ D
Sbjct: 354 VVSGSRDATLRVWDIET-GQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVW--DP 408
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
T +C+ + + R S++ D + D +R+++ G+ + L H +
Sbjct: 409 ETETCLHTLQGHTNRV----YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 464
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
+ + + ++ S + DSTV +W++
Sbjct: 465 SGMELKDN--ILVSGNADSTVKIWDI 488
Score = 103 (41.3 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 36/149 (24%), Positives = 70/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D + VWD L ++ H V L D +SG D I +++++
Sbjct: 394 VVSGAYDFMVKVWDPETETC-LHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVE- 449
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK---YHH 349
TG+C+ + + SG ++ + ++ A D V+I++ + G L L+ H
Sbjct: 450 -TGNCI--HTLTGHQSLTSGMELKDNILVSGNA--DSTVKIWDIKTGQCLQTLQGPNKHQ 504
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + F+ + + ++S+D TV LW+L
Sbjct: 505 SAVTCLQFNKN--FVITSSDDGTVKLWDL 531
Score = 78 (32.5 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91
I+ +G+T L++W+ + +H+ +G S + +V+S RD T++ W
Sbjct: 313 IIISGSTDRTLKVWNAE-----TGECIHTL-YGHTSTVRCMHLHEKRVVSGSRDATLRVW 366
Query: 92 DIENG 96
DIE G
Sbjct: 367 DIETG 371
Score = 68 (29.0 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+ L GH ++V C H + + +G+ LR+WD + + H AA V
Sbjct: 334 IHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-D 390
Query: 71 GPSIGLNKVISQGRDGTVKCWDIE 94
G +V+S D VK WD E
Sbjct: 391 G-----RRVVSGAYDFMVKVWDPE 409
Score = 67 (28.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VL+GH V C + +G+ L++W V + + + H+ G+ S
Sbjct: 255 VLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG--GVWSSQMRD 311
Query: 73 SIGLNKVISQGRDGTVKCWDIENG 96
+I +IS D T+K W+ E G
Sbjct: 312 NI----IISGSTDRTLKVWNAETG 331
Score = 39 (18.8 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRLH 198
V+G + + + +WD+ T + C LH
Sbjct: 355 VSGSRDATLRVWDIETGQ-C--LH 375
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 107 (42.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 33/146 (22%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D ++ VWDI G L + H+ V C+ D +SG D + ++ D
Sbjct: 396 VVSGSRDATLRVWDIET-GQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVW--DP 450
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
T +C+ + + R S++ D + D +R+++ G+ + L H +
Sbjct: 451 ETETCLHTLQGHTNRV----YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 506
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
+ + + ++ S + DSTV +W++
Sbjct: 507 SGMELKDN--ILVSGNADSTVKIWDI 530
Score = 103 (41.3 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 36/149 (24%), Positives = 70/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D + VWD L ++ H V L D +SG D I +++++
Sbjct: 436 VVSGAYDFMVKVWDPETETC-LHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVE- 491
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK---YHH 349
TG+C+ + + SG ++ + ++ A D V+I++ + G L L+ H
Sbjct: 492 -TGNCI--HTLTGHQSLTSGMELKDNILVSGNA--DSTVKIWDIKTGQCLQTLQGPSKHQ 546
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + F+ + + ++S+D TV LW+L
Sbjct: 547 SAVTCLQFNKN--FVITSSDDGTVKLWDL 573
Score = 78 (32.5 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91
I+ +G+T L++W+ + +H+ +G S + +V+S RD T++ W
Sbjct: 355 IIISGSTDRTLKVWNAE-----TGECIHTL-YGHTSTVRCMHLHEKRVVSGSRDATLRVW 408
Query: 92 DIENG 96
DIE G
Sbjct: 409 DIETG 413
Score = 68 (29.0 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+ L GH ++V C H + + +G+ LR+WD + + H AA V
Sbjct: 376 IHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-D 432
Query: 71 GPSIGLNKVISQGRDGTVKCWDIE 94
G +V+S D VK WD E
Sbjct: 433 G-----RRVVSGAYDFMVKVWDPE 451
Score = 67 (28.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VL+GH V C + +G+ L++W V + + + H+ G+ S
Sbjct: 297 VLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG--GVWSSQMRD 353
Query: 73 SIGLNKVISQGRDGTVKCWDIENG 96
+I +IS D T+K W+ E G
Sbjct: 354 NI----IISGSTDRTLKVWNAETG 373
Score = 39 (18.8 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRLH 198
V+G + + + +WD+ T + C LH
Sbjct: 397 VSGSRDATLRVWDIETGQ-C--LH 417
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 132 (51.5 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEP-----VLCLSIDESCNGGISGGADQKIVL 287
+++ +DG ++VWD T KVH P V+ + S N GG D +
Sbjct: 70 LVSASQDGKLIVWDT------YTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSI 123
Query: 288 YNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY 347
YNL G+ + +E++ +S D+ I ++G D +++ G +
Sbjct: 124 YNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALWDIETGQQKTVFVG 182
Query: 348 HHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H C +++ S D KL S + D++ LW++
Sbjct: 183 HTGDCMSLAVSPDYKLFISGACDASAKLWDV 213
Score = 85 (35.0 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 23/114 (20%), Positives = 55/114 (48%)
Query: 266 CLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG-ISGTSIRPDSKIAAT 324
C +D+ N ++ D L++++ TG +K + + G ++ PD K+ +
Sbjct: 149 CRFLDD--NNIVTSSGDTTCALWDIE--TGQ---QKTVFVGHTGDCMSLAVSPDYKLFIS 201
Query: 325 AGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
D ++++ R+G+ H + NA+ F + + + + S+D++ L++L
Sbjct: 202 GACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDL 255
Score = 72 (30.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS-----SSWVHSAAHGIVS- 67
LRGH A + + + +L + + G+L +WDT V SSWV + A+
Sbjct: 51 LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 68 -VATGPSIGLNKVIS----QGRDGTVK 89
VA G GL+ + S + R+G VK
Sbjct: 111 FVACG---GLDNMCSIYNLKSREGNVK 134
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 100 (40.3 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVI-----KKEINLER 307
P+ + H V + D S S D + ++++ T CV KEI +
Sbjct: 355 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDT--CVHDLQAHSKEIYTIK 412
Query: 308 PGISGTSI-RPDSKIA-ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMA 365
+G + P+S I A+A +D VR+++ +G L L H +V+FS D K +A
Sbjct: 413 WSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLA 472
Query: 366 SASEDSTVALW 376
S S D V +W
Sbjct: 473 SGSFDKCVHIW 483
Score = 80 (33.2 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 26/104 (25%), Positives = 45/104 (43%)
Query: 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW------VHS 60
PP VLRGH + V ++ +L +G+ RIW+ ++ S+ +
Sbjct: 172 PPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE 231
Query: 61 AAHGIVSVATGPSIGLNK---VISQGR-DGTVKCWDIENGGLSS 100
H + S S+ N +++ G DG + W E+G L+S
Sbjct: 232 GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLAS 274
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 139 (54.0 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 37/144 (25%), Positives = 69/144 (47%)
Query: 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV 298
D + +W PL HL V C+ + N +G D+ + L++ G+ V
Sbjct: 401 DRTARLWSFDRT-YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQ--GNSV 457
Query: 299 IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFS 358
+ R + + P+ K A+AG D+R+++++ G+ L+ H +++FS
Sbjct: 458 --RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 515
Query: 359 SDCKLMASASEDSTVALWELYPPH 382
D L+ASAS D++V +W++ H
Sbjct: 516 PDSSLVASASMDNSVRVWDIRSSH 539
Score = 39 (18.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD 46
VLRGH V F L + + +R WD
Sbjct: 333 VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD 366
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 108 (43.1 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 36/151 (23%), Positives = 70/151 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL-D 291
V++G D + +WDIR + L ++ H + + +S+ + ++ D + ++++
Sbjct: 197 VISGGIDNEVKIWDIRKQAV-LHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRP 255
Query: 292 HSTGSCVIK----KEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY 347
++ G +K + N E+ + + P S + DR V I++ L L
Sbjct: 256 YAPGERCVKVFQGHQHNFEK-NLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPG 314
Query: 348 HHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H+ + NAV FS L+ S S D T+ L E+
Sbjct: 315 HNGSVNAVDFSPKEPLILSGSSDKTLYLGEI 345
Score = 66 (28.3 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 21/88 (23%), Positives = 35/88 (39%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH-RTVSSSWVHSAAHGIVSV 68
P+ L GH + FH +L + ++ IW + V + HS A ++
Sbjct: 47 PIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGA--VMEA 104
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENG 96
P G + + + D T+ WDI G
Sbjct: 105 HFTPD-G-SHIFTCSTDKTLAFWDIATG 130
Score = 61 (26.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 21/83 (25%), Positives = 30/83 (36%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHG-IVSVA 69
V + GH +V + F +F +T L WD + HG V+
Sbjct: 91 VMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQR----RFKGHGNFVNSV 146
Query: 70 TGPSIGLNKVISQGRDGTVKCWD 92
G G + S D T+K WD
Sbjct: 147 QGSRRGQQLLCSGSDDRTIKIWD 169
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 111 (44.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 33/147 (22%), Positives = 69/147 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLD 291
++ G D ++ VWD+ + G L + H E VL L CNG ++ D+ I ++++
Sbjct: 278 IVTGSSDSTVRVWDVSS-GEVLNTLIHHNEAVLHLRF---CNGLMVTCSKDRSIAVWDMA 333
Query: 292 HSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT 351
+T +++ + R ++ D K +A DR +++++ + L H
Sbjct: 334 SAT-DISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG 390
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
+ + +L+ S S D+T+ LW++
Sbjct: 391 IACLQYRD--RLVVSGSSDNTIRLWDI 415
Score = 110 (43.8 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 35/143 (24%), Positives = 66/143 (46%)
Query: 238 EDGSILVWDIRNP-GIPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG 295
+D SI VWD+ + I L + V H V + D+ +S D+ I ++ ST
Sbjct: 323 KDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYI--VSASGDRTIKVW----STS 376
Query: 296 SCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAV 355
+C + +N + GI+ R ++ + D +R+++ G+ L +L+ H +
Sbjct: 377 TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 434
Query: 356 SFSSDCKLMASASEDSTVALWEL 378
F D K + S + D + +W+L
Sbjct: 435 RF--DNKRIVSGAYDGKIKVWDL 455
Score = 69 (29.3 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 20/81 (24%), Positives = 39/81 (48%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VL GH SV +C + ++ G++ +R+WD V V ++ +H H +
Sbjct: 260 VLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWD-VSSGEVLNTLIH---HNEAVLHLRF 313
Query: 73 SIGLNKVISQGRDGTVKCWDI 93
GL +++ +D ++ WD+
Sbjct: 314 CNGL--MVTCSKDRSIAVWDM 332
Score = 50 (22.7 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 12/72 (16%), Positives = 29/72 (40%)
Query: 25 CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84
C + +G ++IWD + H+ + ++ + + +++
Sbjct: 230 CLQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGS--VLCLQYDERV----IVTGSS 283
Query: 85 DGTVKCWDIENG 96
D TV+ WD+ +G
Sbjct: 284 DSTVRVWDVSSG 295
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 110 (43.8 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 260 HLEPVLCLSIDESCNGGI--SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317
H PVLC+ I S +G + +G AD+ + ++ LD G C + + +
Sbjct: 585 HKLPVLCMDI--SYDGALIATGSADRNVKIWGLDF--GDC--HRSLFAHDDSVMYLQFVA 638
Query: 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
S + TAG D +++ ++ K + L+ HH ++ S + + SAS D ++ LWE
Sbjct: 639 KSHLFFTAGKDNKIKQWDADKFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWE 698
Score = 96 (38.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 34/156 (21%), Positives = 72/156 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V+ G + G + ++D+ + G + + H V +++ G ++GGAD+ + ++ +
Sbjct: 464 VIVGTKTGKLQLYDLAS-GTLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDFEL 522
Query: 293 STGSCVIKKEINLERPGISGTS-----IR--PDSKIAATAGWDRRVRIYNYRKGSALAIL 345
I+K +++++ I +R P+ K+ A + D V+++ Y +
Sbjct: 523 VKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVF-YTDTLKFFLS 581
Query: 346 KYHH---ATCNAVSFSSDCKLMASASEDSTVALWEL 378
Y H C +S+ D L+A+ S D V +W L
Sbjct: 582 LYGHKLPVLCMDISY--DGALIATGSADRNVKIWGL 615
Score = 75 (31.5 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 20/79 (25%), Positives = 38/79 (48%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
GH+A+VT + + Q L +G+ ++ +WD + + H A + V
Sbjct: 104 GHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLYRLKGHKDA--VTQVLFLKE-- 159
Query: 76 LNKVISQGRDGTVKCWDIE 94
N +++ G+D VK WD++
Sbjct: 160 KNLLVTSGKDTLVKWWDLD 178
Score = 63 (27.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWD 46
L GHR V + + L GT ELR+WD
Sbjct: 186 LVGHRTEVWGMALVSEEKRLITGTADSELRVWD 218
Score = 63 (27.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 33 LFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92
+ GT G+L+++D + + H A + S+A P ++ G D VK WD
Sbjct: 464 VIVGTKTGKLQLYDLASGTLMETLNAHDGA--VWSIALSPD--QRGFVTGGADKCVKFWD 519
Query: 93 IE 94
E
Sbjct: 520 FE 521
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 140 (54.3 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 37/144 (25%), Positives = 70/144 (48%)
Query: 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 294
+G D + +W PL HL V C+ + N +G D+ + L++
Sbjct: 419 SGSHDRTARLWSFDRT-YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-- 475
Query: 295 GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA 354
G+ V + R + + P+ K A+AG D+R+++++ G+ L+ H +
Sbjct: 476 GNSV--RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 533
Query: 355 VSFSSDCKLMASASEDSTVALWEL 378
++FS D L+ASAS D++V +W++
Sbjct: 534 LTFSPDSSLIASASMDNSVRVWDI 557
Score = 38 (18.4 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD 46
+LRGH V F L + + +R WD
Sbjct: 355 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD 388
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 135 (52.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 40/146 (27%), Positives = 63/146 (43%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
++AG + GSI VWD+ I T M H + L SG D I L+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
CV + + + + PD K A+A D V++++ G ++ H
Sbjct: 137 K--GCVFRYRGHSQ--AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
N V F + L+AS S D T+ W+L
Sbjct: 193 NVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 34/160 (21%), Positives = 73/160 (45%)
Query: 219 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS 278
V + + K+ G + + G +D + +W I P + ++ H PV + ++ ++
Sbjct: 23 VSSLVLGKASGRL-LATGGDDCRVNLWSINKPNC-IMSLTGHTSPVESVRLNTPEELIVA 80
Query: 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338
G I +++L+ + I + + + I P + A+ D +++++ R+
Sbjct: 81 GSQSGSIRVWDLE----AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 339 GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + H + FS D K +ASA++D TV LW+L
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 107 (42.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 33/146 (22%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D ++ VWDI G L + H+ V C+ D +SG D + ++ D
Sbjct: 394 VVSGSRDATLRVWDIET-GQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVW--DP 448
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
T +C+ + + R S++ D + D +R+++ G+ + L H +
Sbjct: 449 ETETCLHTLQGHTNRV----YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 504
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
+ + + ++ S + DSTV +W++
Sbjct: 505 SGMELKDN--ILVSGNADSTVKIWDI 528
Score = 103 (41.3 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 36/149 (24%), Positives = 70/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D + VWD L ++ H V L D +SG D I +++++
Sbjct: 434 VVSGAYDFMVKVWDPETETC-LHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVE- 489
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK---YHH 349
TG+C+ + + SG ++ + ++ A D V+I++ + G L L+ H
Sbjct: 490 -TGNCI--HTLTGHQSLTSGMELKDNILVSGNA--DSTVKIWDIKTGQCLQTLQGPNKHQ 544
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + F+ + + ++S+D TV LW+L
Sbjct: 545 SAVTCLQFNKN--FVITSSDDGTVKLWDL 571
Score = 78 (32.5 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91
I+ +G+T L++W+ + +H+ +G S + +V+S RD T++ W
Sbjct: 353 IIISGSTDRTLKVWNAE-----TGECIHTL-YGHTSTVRCMHLHEKRVVSGSRDATLRVW 406
Query: 92 DIENG 96
DIE G
Sbjct: 407 DIETG 411
Score = 68 (29.0 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+ L GH ++V C H + + +G+ LR+WD + + H AA V
Sbjct: 374 IHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-D 430
Query: 71 GPSIGLNKVISQGRDGTVKCWDIE 94
G +V+S D VK WD E
Sbjct: 431 G-----RRVVSGAYDFMVKVWDPE 449
Score = 67 (28.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VL+GH V C + +G+ L++W V + + + H+ G+ S
Sbjct: 295 VLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG--GVWSSQMRD 351
Query: 73 SIGLNKVISQGRDGTVKCWDIENG 96
+I +IS D T+K W+ E G
Sbjct: 352 NI----IISGSTDRTLKVWNAETG 371
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRLH 198
V+G + + + +WD+ T + C LH
Sbjct: 395 VSGSRDATLRVWDIETGQ-C--LH 415
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 107 (42.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 33/146 (22%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D ++ VWDI G L + H+ V C+ D +SG D + ++ D
Sbjct: 396 VVSGSRDATLRVWDIET-GQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVW--DP 450
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
T +C+ + + R S++ D + D +R+++ G+ + L H +
Sbjct: 451 ETETCLHTLQGHTNRV----YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 506
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
+ + + ++ S + DSTV +W++
Sbjct: 507 SGMELKDN--ILVSGNADSTVKIWDI 530
Score = 103 (41.3 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 36/149 (24%), Positives = 70/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D + VWD L ++ H V L D +SG D I +++++
Sbjct: 436 VVSGAYDFMVKVWDPETETC-LHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVE- 491
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK---YHH 349
TG+C+ + + SG ++ + ++ A D V+I++ + G L L+ H
Sbjct: 492 -TGNCI--HTLTGHQSLTSGMELKDNILVSGNA--DSTVKIWDIKTGQCLQTLQGPSKHQ 546
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + F+ + + ++S+D TV LW+L
Sbjct: 547 SAVTCLQFNKN--FVITSSDDGTVKLWDL 573
Score = 78 (32.5 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91
I+ +G+T L++W+ + +H+ +G S + +V+S RD T++ W
Sbjct: 355 IIISGSTDRTLKVWNAE-----TGECIHTL-YGHTSTVRCMHLHEKRVVSGSRDATLRVW 408
Query: 92 DIENG 96
DIE G
Sbjct: 409 DIETG 413
Score = 68 (29.0 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+ L GH ++V C H + + +G+ LR+WD + + H AA V
Sbjct: 376 IHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-D 432
Query: 71 GPSIGLNKVISQGRDGTVKCWDIE 94
G +V+S D VK WD E
Sbjct: 433 G-----RRVVSGAYDFMVKVWDPE 451
Score = 67 (28.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VL+GH V C + +G+ L++W V + + + H+ G+ S
Sbjct: 297 VLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG--GVWSSQMRD 353
Query: 73 SIGLNKVISQGRDGTVKCWDIENG 96
+I +IS D T+K W+ E G
Sbjct: 354 NI----IISGSTDRTLKVWNAETG 373
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRLH 198
V+G + + + +WD+ T + C LH
Sbjct: 397 VSGSRDATLRVWDIETGQ-C--LH 417
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 123 (48.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 35/150 (23%), Positives = 70/150 (46%)
Query: 233 VLAGYEDGSILVWDIRN-PGIPLT-AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 290
+ G +D S++VW+ + I + H E + CL I+ + + ISG D + + N+
Sbjct: 212 ICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNI 271
Query: 291 DHSTGSCVIKKEINLERPGISGTSIRPDSK---IAATAGWDRRVRIYNYRKGSALAILKY 347
TG V +N + P S +AAT G D+++ I++ + + I +
Sbjct: 272 --VTGKVV--SSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICE- 326
Query: 348 HHATCNAVSFSSDCKLMASASEDSTVALWE 377
H ++++ K +A+ + TV++W+
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWD 356
Score = 120 (47.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG---GISGGADQKIVLYNL 290
++G +DGS+ + +I G ++++ H + V C+ S +GG D+K+++++L
Sbjct: 258 ISGSKDGSVHIVNIVT-GKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDL 316
Query: 291 DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
HST + + E G++ + SK AT + V I++ G+ + H
Sbjct: 317 QHSTPRFICEHE-----EGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQD 371
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWE 377
A+S S++ + S S D+T ++E
Sbjct: 372 AVQAISVSTNTDFIVSVSVDNTARVFE 398
Score = 51 (23.0 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD 46
D A L GH+ SV+ + F +L +G G ++I+D
Sbjct: 104 DWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFD 141
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 130 (50.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 38/148 (25%), Positives = 65/148 (43%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 293
L+G DG + +WD+ G H + VL ++ +S D+ I L+N +
Sbjct: 79 LSGSWDGELRLWDLAT-GETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN---T 134
Query: 294 TGSCVIK-KEINLERPGISGTSIRPDSKIAA--TAGWDRRVRIYNYRKGSALAILKYHHA 350
G C E + + +S P++ + +A WD+ V+++N + L H
Sbjct: 135 LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSG 194
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWEL 378
N V+ S D L AS +D + LW+L
Sbjct: 195 YLNTVAVSPDGSLCASGGKDGVILLWDL 222
Score = 94 (38.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH V DV +G+ GELR+WD T H+ ++SVA S
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTK--DVLSVAF--S 114
Query: 74 IGLNKVISQGRDGTVKCWD 92
+++S RD T+K W+
Sbjct: 115 TDNRQIVSASRDRTIKLWN 133
Score = 74 (31.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 20/102 (19%), Positives = 53/102 (51%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+S D+ + ++NL + C ++ + ++ ++ PD + A+ G D + +++
Sbjct: 167 VSASWDKTVKVWNLQN----CKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+G L L+ + +++ FS + + +A+E+S + +W+L
Sbjct: 223 AEGKKLYSLEAG-SIIHSLCFSPNRYWLCAATENS-IRIWDL 262
Score = 53 (23.7 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 288
L + SI +WD+ + + + +KV L+ S E GG+ G +QK V+Y
Sbjct: 249 LCAATENSIRIWDLESKSV-VEDLKVDLK-----SEAEKNEGGVGTG-NQKKVIY 296
Score = 42 (19.8 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 352 CNAVSFSSDCKLMASASEDSTVALW 376
C ++++S+D + S D V +W
Sbjct: 297 CTSLNWSADGSTLFSGYTDGVVRVW 321
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/88 (20%), Positives = 35/88 (39%)
Query: 13 VLRGHRASVTDVCFH-QTKPILFAGTTGGELRIWD-TVQHRT--VSSSWVHSAAHGIVSV 68
++R H VT + I+ + + +W T ++ V+ + +H + V
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDV 69
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENG 96
S G +S DG ++ WD+ G
Sbjct: 70 VLS-SDG-QFALSGSWDGELRLWDLATG 95
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 121 (47.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
F +++ ED +I VWD T +K H + V +S D S S AD I L+
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLW- 177
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D C+ + ++ +S +I P+ +A D+ ++++ + G + H
Sbjct: 178 -DFQGFECI--RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALW 376
V + D L+AS S D TV +W
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++ D STG C++ + + + G K + D+ +R+++Y
Sbjct: 312 LSGSRDKTIKMW--DVSTGMCLMTL-VGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + L H ++ F + + S D TV +WE
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSA 61
P PP+ A L GHR+ VT V FH ++ + + +++WD RT+ H+
Sbjct: 96 PRPPEKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG---HTD 151
Query: 62 AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
+ + ++ S L + S D T+K WD +
Sbjct: 152 S--VQDISFDHSGKL--LASCSADMTIKLWDFQ 180
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 311 LLSGSRDKTIKMWDV 325
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 121 (47.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
F +++ ED +I VWD T +K H + V +S D S S AD I L+
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLW- 177
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D C+ + ++ +S +I P+ +A D+ ++++ + G + H
Sbjct: 178 -DFQGFECI--RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALW 376
V + D L+AS S D TV +W
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++ D STG C++ + + + G K + D+ +R+++Y
Sbjct: 312 LSGSRDKTIKMW--DVSTGMCLMTL-VGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + L H ++ F + + S D TV +WE
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSA 61
P PP+ A L GHR+ VT V FH ++ + + +++WD RT+ H+
Sbjct: 96 PRPPEKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG---HTD 151
Query: 62 AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
+ + ++ S L + S D T+K WD +
Sbjct: 152 S--VQDISFDHSGKL--LASCSADMTIKLWDFQ 180
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 311 LLSGSRDKTIKMWDV 325
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 121 (47.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
F +++ ED +I VWD T +K H + V +S D S S AD I L+
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLW- 177
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D C+ + ++ +S +I P+ +A D+ ++++ + G + H
Sbjct: 178 -DFQGFECI--RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALW 376
V + D L+AS S D TV +W
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++ D STG C++ + + + G K + D+ +R+++Y
Sbjct: 312 LSGSRDKTIKMW--DVSTGMCLMTL-VGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + L H ++ F + + S D TV +WE
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSA 61
P PP+ A L GHR+ VT V FH ++ + + +++WD RT+ H+
Sbjct: 96 PRPPEKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG---HTD 151
Query: 62 AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
+ + ++ S L + S D T+K WD +
Sbjct: 152 S--VQDISFDHSGKL--LASCSADMTIKLWDFQ 180
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 311 LLSGSRDKTIKMWDV 325
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 121 (47.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
F +++ ED +I VWD T +K H + V +S D S S AD I L+
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLW- 177
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D C+ + ++ +S +I P+ +A D+ ++++ + G + H
Sbjct: 178 -DFQGFECI--RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALW 376
V + D L+AS S D TV +W
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++ D STG C++ + + + G K + D+ +R+++Y
Sbjct: 312 LSGSRDKTIKMW--DVSTGMCLMTL-VGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + L H ++ F + + S D TV +WE
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSA 61
P PP+ A L GHR+ VT V FH ++ + + +++WD RT+ H+
Sbjct: 96 PRPPEKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG---HTD 151
Query: 62 AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
+ + ++ S L + S D T+K WD +
Sbjct: 152 S--VQDISFDHSGKL--LASCSADMTIKLWDFQ 180
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 311 LLSGSRDKTIKMWDV 325
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 121 (47.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
F +++ ED +I VWD T +K H + V +S D S S AD I L+
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLW- 177
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D C+ + ++ +S +I P+ +A D+ ++++ + G + H
Sbjct: 178 -DFQGFECI--RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALW 376
V + D L+AS S D TV +W
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++ D STG C++ + + + G K + D+ +R+++Y
Sbjct: 312 LSGSRDKTIKMW--DVSTGMCLMTL-VGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + L H ++ F + + S D TV +WE
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSA 61
P PP+ A L GHR+ VT V FH ++ + + +++WD RT+ H+
Sbjct: 96 PRPPEKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG---HTD 151
Query: 62 AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
+ + ++ S L + S D T+K WD +
Sbjct: 152 S--VQDISFDHSGKL--LASCSADMTIKLWDFQ 180
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 311 LLSGSRDKTIKMWDV 325
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 121 (47.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
F +++ ED +I VWD T +K H + V +S D S S AD I L+
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLW- 177
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D C+ + ++ +S +I P+ +A D+ ++++ + G + H
Sbjct: 178 -DFQGFECI--RTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHR 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALW 376
V + D L+AS S D TV +W
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++ D STG C++ + + + G K + D+ +R+++Y
Sbjct: 312 LSGSRDKTIKMW--DVSTGMCLMTL-VGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + L H ++ F + + S D TV +WE
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSA 61
P PP+ A L GHR+ VT V FH ++ + + +++WD RT+ H+
Sbjct: 96 PRPPEKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG---HTD 151
Query: 62 AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
+ + ++ S L + S D T+K WD +
Sbjct: 152 S--VQDISFDHSGKL--LASCSADMTIKLWDFQ 180
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 311 LLSGSRDKTIKMWDV 325
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 121 (47.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
F +++ ED +I VWD T +K H + V +S D S S AD I L+
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLW- 177
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D C+ + ++ +S +I P+ +A D+ ++++ + G + H
Sbjct: 178 -DFQGFECI--RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALW 376
V + D L+AS S D TV +W
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++ D STG C++ + + + G K + D+ +R+++Y
Sbjct: 312 LSGSRDKTIKMW--DVSTGMCLMTL-VGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + L H ++ F + + S D TV +WE
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSA 61
P PP+ A L GHR+ VT V FH ++ + + +++WD RT+ H+
Sbjct: 96 PRPPEKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG---HTD 151
Query: 62 AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
+ + ++ S L + S D T+K WD +
Sbjct: 152 S--VQDISFDHSGKL--LASCSADMTIKLWDFQ 180
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 311 LLSGSRDKTIKMWDV 325
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 121 (47.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
F +++ ED +I VWD T +K H + V +S D S S AD I L+
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLW- 177
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D C+ + ++ +S +I P+ +A D+ ++++ + G + H
Sbjct: 178 -DFQGFECI--RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALW 376
V + D L+AS S D TV +W
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++ D STG C++ + + + G K + D+ +R+++Y
Sbjct: 312 LSGSRDKTIKMW--DVSTGMCLMTL-VGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + L H ++ F + + S D TV +WE
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSA 61
P PP+ A L GHR+ VT V FH ++ + + +++WD RT+ H+
Sbjct: 96 PRPPEKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG---HTD 151
Query: 62 AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
+ + ++ S L + S D T+K WD +
Sbjct: 152 S--VQDISFDHSGKL--LASCSADMTIKLWDFQ 180
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 311 LLSGSRDKTIKMWDV 325
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 121 (47.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
F +++ ED +I VWD T +K H + V +S D S S AD I L+
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLW- 177
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D C+ + ++ +S +I P+ +A D+ ++++ + G + H
Sbjct: 178 -DFQGFECI--RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALW 376
V + D L+AS S D TV +W
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++ D STG C++ + + + G K + D+ +R+++Y
Sbjct: 312 LSGSRDKTIKMW--DVSTGMCLMTL-VGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + L H ++ F + + S D TV +WE
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSA 61
P PP+ A L GHR+ VT V FH ++ + + +++WD RT+ H+
Sbjct: 96 PRPPEKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG---HTD 151
Query: 62 AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
+ + ++ S L + S D T+K WD +
Sbjct: 152 S--VQDISFDHSGKL--LASCSADMTIKLWDFQ 180
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 311 LLSGSRDKTIKMWDV 325
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 120 (47.3 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 289
F +++ ED +I VWD T +K H + V +S D S S AD I L+
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVEDISFDHSGKLLASCSADMTIKLW- 177
Query: 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349
D C+ + ++ +S +I P+ +A D+ ++++ + G + H
Sbjct: 178 -DFQGFECI--RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR 234
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALW 376
V + D L+AS S D TV +W
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
+SG D+ I ++ D STG C++ + + + G K + D+ +R+++Y
Sbjct: 312 LSGSRDKTIKMW--DVSTGMCLMTL-VGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377
+ + L H ++ F + + S D TV +WE
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSA 61
P PP+ A L GHR+ VT V FH ++ + + +++WD RT+ H+
Sbjct: 96 PRPPEKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG---HTD 151
Query: 62 AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94
+ + ++ S L + S D T+K WD +
Sbjct: 152 S--VEDISFDHSGKL--LASCSADMTIKLWDFQ 180
Score = 38 (18.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 364 MASASEDSTVALWEL 378
+ S S D T+ +W++
Sbjct: 311 LLSGSRDKTIKMWDV 325
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 104 (41.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 44/207 (21%), Positives = 86/207 (41%)
Query: 180 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 239
LSE ++T+ ++ S G G G+C + +P G V G +
Sbjct: 414 LSEDNTLLMSTSHSEVKIWNPSTGSCLRTIDSGYGLCSLI---VPQNKYGIV----GTKS 466
Query: 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVL--YNLDHSTGSC 297
G + + DI + + +K H + ++ + +G ++ AD ++ Y + +G
Sbjct: 467 GVLEIIDIGS-ATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKA 525
Query: 298 VIKKEI-NLE----RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY-HHAT 351
K + N++ + +I PD+K A A D V+++ Y + Y H
Sbjct: 526 TKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVF-YMDSLKFYLSLYGHKLP 584
Query: 352 CNAVSFSSDCKLMASASEDSTVALWEL 378
+ SSD +L+ + S+D + +W L
Sbjct: 585 VMCIDISSDGELIVTGSQDKNLKIWGL 611
Score = 103 (41.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 31/120 (25%), Positives = 53/120 (44%)
Query: 260 HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319
H PV+C+ I ++G D+ + ++ LD G C K I + G ++
Sbjct: 581 HKLPVMCIDISSDGELIVTGSQDKNLKIWGLDF--GDC--HKSIFAHGDSVMGVKFVRNT 636
Query: 320 KIAATAGWDRRVRIYNYRKGSALAILKYHHAT--CNAVSFSSDCKLMASASEDSTVALWE 377
+ G DR V+ ++ K L L+ HHA C A+S D + + S D ++ W+
Sbjct: 637 HYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGD--FLVTGSHDRSMRRWD 694
Score = 80 (33.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/98 (31%), Positives = 45/98 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDT-VQHRTVSSSWVHSAAHGIVSVATGP 72
LRGHR VTD+ F L + + LR+WD QH S HS + SV T P
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSE---VWSVDTDP 200
Query: 73 SIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS 110
V++ D ++ + ++ SSN SL +N+
Sbjct: 201 EE--RYVVTGSADQELRFYAVKE--YSSNGSLVSDSNA 234
Score = 66 (28.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 35/156 (22%), Positives = 72/156 (46%)
Query: 44 IWDTVQHRTVSSSWVHSAAHGIVSVA-TGPSIGLNKVISQG-RDGTVKCWDIENGGLSSN 101
IW V+ S + S++ G S+A T + + +++ G DG+++ WD E G
Sbjct: 43 IWH-VRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAVGYADGSIRIWDTEKG----- 96
Query: 102 PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEI 161
+ + NS H ++ ++ + A+ KD + + + V L + +R ++
Sbjct: 97 -TCEVNFNS-HKGAVTALRYNKVGSMLASGSKD-NDIILWDVVGESGLFRLR-GHRD-QV 151
Query: 162 IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL 197
D V +G K + V+ + + +WDL T + C ++
Sbjct: 152 TDLVFLDGGKKL-VSSSKDKFLRVWDLET-QHCMQI 185
Score = 64 (27.6 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 17/79 (21%), Positives = 38/79 (48%)
Query: 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH-SAAHGIVSVATGPSIG 75
H+ +VT + +++ +L +G+ ++ +WD V + H +V + G
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGG---- 160
Query: 76 LNKVISQGRDGTVKCWDIE 94
K++S +D ++ WD+E
Sbjct: 161 -KKLVSSSKDKFLRVWDLE 178
Score = 61 (26.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH-GIVSVATGPSI 74
G +VT + ++ G G +RIWDT + + V+ +H G V+ +
Sbjct: 63 GPSLAVTSIA-SSASSLVAVGYADGSIRIWDTEK----GTCEVNFNSHKGAVTALRYNKV 117
Query: 75 GLNKVISQGRDGTVKCWDI--ENG 96
G + + S +D + WD+ E+G
Sbjct: 118 G-SMLASGSKDNDIILWDVVGESG 140
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 107 (42.7 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 33/146 (22%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D ++ VWDI G L + H+ V C+ D +SG D + ++ D
Sbjct: 474 VVSGSRDATLRVWDIET-GQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVW--DP 528
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
T +C+ + + R S++ D + D +R+++ G+ + L H +
Sbjct: 529 ETETCLHTLQGHTNRV----YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 584
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
+ + + ++ S + DSTV +W++
Sbjct: 585 SGMELKDN--ILVSGNADSTVKIWDI 608
Score = 103 (41.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 36/149 (24%), Positives = 70/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D + VWD L ++ H V L D +SG D I +++++
Sbjct: 514 VVSGAYDFMVKVWDPETETC-LHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVE- 569
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK---YHH 349
TG+C+ + + SG ++ + ++ A D V+I++ + G L L+ H
Sbjct: 570 -TGNCI--HTLTGHQSLTSGMELKDNILVSGNA--DSTVKIWDIKTGQCLQTLQGPNKHQ 624
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + F+ + + ++S+D TV LW+L
Sbjct: 625 SAVTCLQFNKN--FVITSSDDGTVKLWDL 651
Score = 78 (32.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91
I+ +G+T L++W+ + +H+ +G S + +V+S RD T++ W
Sbjct: 433 IIISGSTDRTLKVWNAE-----TGECIHTL-YGHTSTVRCMHLHEKRVVSGSRDATLRVW 486
Query: 92 DIENG 96
DIE G
Sbjct: 487 DIETG 491
Score = 68 (29.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+ L GH ++V C H + + +G+ LR+WD + + H AA V
Sbjct: 454 IHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-D 510
Query: 71 GPSIGLNKVISQGRDGTVKCWDIE 94
G +V+S D VK WD E
Sbjct: 511 G-----RRVVSGAYDFMVKVWDPE 529
Score = 67 (28.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VL+GH V C + +G+ L++W V + + + H+ G+ S
Sbjct: 375 VLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG--GVWSSQMRD 431
Query: 73 SIGLNKVISQGRDGTVKCWDIENG 96
+I +IS D T+K W+ E G
Sbjct: 432 NI----IISGSTDRTLKVWNAETG 451
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRLH 198
V+G + + + +WD+ T + C LH
Sbjct: 475 VSGSRDATLRVWDIETGQ-C--LH 495
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 107 (42.7 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 33/146 (22%), Positives = 67/146 (45%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D ++ VWDI G L + H+ V C+ D +SG D + ++ D
Sbjct: 479 VVSGSRDATLRVWDIET-GQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVW--DP 533
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
T +C+ + + R S++ D + D +R+++ G+ + L H +
Sbjct: 534 ETETCLHTLQGHTNRV----YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 589
Query: 353 NAVSFSSDCKLMASASEDSTVALWEL 378
+ + + ++ S + DSTV +W++
Sbjct: 590 SGMELKDN--ILVSGNADSTVKIWDI 613
Score = 103 (41.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 36/149 (24%), Positives = 70/149 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G D + VWD L ++ H V L D +SG D I +++++
Sbjct: 519 VVSGAYDFMVKVWDPETETC-LHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVE- 574
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK---YHH 349
TG+C+ + + SG ++ + ++ A D V+I++ + G L L+ H
Sbjct: 575 -TGNCI--HTLTGHQSLTSGMELKDNILVSGNA--DSTVKIWDIKTGQCLQTLQGPNKHQ 629
Query: 350 ATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ + F+ + + ++S+D TV LW+L
Sbjct: 630 SAVTCLQFNKN--FVITSSDDGTVKLWDL 656
Score = 78 (32.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91
I+ +G+T L++W+ + +H+ +G S + +V+S RD T++ W
Sbjct: 438 IIISGSTDRTLKVWNAE-----TGECIHTL-YGHTSTVRCMHLHEKRVVSGSRDATLRVW 491
Query: 92 DIENG 96
DIE G
Sbjct: 492 DIETG 496
Score = 68 (29.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+ L GH ++V C H + + +G+ LR+WD + + H AA V
Sbjct: 459 IHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-D 515
Query: 71 GPSIGLNKVISQGRDGTVKCWDIE 94
G +V+S D VK WD E
Sbjct: 516 G-----RRVVSGAYDFMVKVWDPE 534
Score = 67 (28.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VL+GH V C + +G+ L++W V + + + H+ G+ S
Sbjct: 380 VLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG--GVWSSQMRD 436
Query: 73 SIGLNKVISQGRDGTVKCWDIENG 96
+I +IS D T+K W+ E G
Sbjct: 437 NI----IISGSTDRTLKVWNAETG 456
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 175 VAGEQLSEVEIWDLNTAERCTRLH 198
V+G + + + +WD+ T + C LH
Sbjct: 480 VSGSRDATLRVWDIETGQ-C--LH 500
>DICTYBASE|DDB_G0278733 [details] [associations]
symbol:aip1 "actin-interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0030863 "cortical
cytoskeleton" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IDA] [GO:0043327 "chemotaxis to cAMP" evidence=IGI]
[GO:0030041 "actin filament polymerization" evidence=IGI]
[GO:0030010 "establishment of cell polarity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0060187 "cell pole" evidence=IDA]
[GO:0042641 "actomyosin" evidence=IDA] [GO:0030864 "cortical actin
cytoskeleton" evidence=IDA] [GO:0030042 "actin filament
depolymerization" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006935 "chemotaxis" evidence=IMP] [GO:0006909
"phagocytosis" evidence=IMP] [GO:0006907 "pinocytosis"
evidence=IMP] [GO:0001891 "phagocytic cup" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0278733 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GenomeReviews:CM000152_GR
GO:GO:0008283 eggNOG:COG2319 GO:GO:0006909 GO:GO:0006935
GO:GO:0030042 EMBL:AAFI02000024 GO:GO:0001891 GO:GO:0030864
GO:GO:0006907 GO:GO:0060187 EMBL:U36936 RefSeq:XP_642008.1
ProteinModelPortal:P54686 STRING:P54686 EnsemblProtists:DDB0214916
GeneID:8621739 KEGG:ddi:DDB_G0278733 OMA:INGIAAW
ProtClustDB:CLSZ2430741 Uniprot:P54686
Length = 597
Score = 116 (45.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338
GG D KI ++ L S + ++ R I+ S P K A+ +R V +++ ++
Sbjct: 456 GGKDNKIHVFTL--SGNNLTASHTLDNHRGAITDLSYSPCGKYLASGCSNREVIVWSGKE 513
Query: 339 GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPPHA 383
+ + H A NAV++S+D K +ASAS DS + +W + P A
Sbjct: 514 AKSKGWVN-HTARINAVAWSNDSKFVASASLDSQIYIWNVENPTA 557
Score = 62 (26.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 21/80 (26%), Positives = 36/80 (45%)
Query: 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHG-IVSVA-TGPSI 74
H T + + + +G G LRIWDT+Q + + + +G I+ +A T +
Sbjct: 57 HPCQTTVAKYAPSGNYIASGDVQGNLRIWDTLQKEHILKA-TYKVLNGAILDIAWTSDNQ 115
Query: 75 GLNKVISQGRD--GTVKCWD 92
L V+ G++ G WD
Sbjct: 116 RL-VVVGDGKERFGAAILWD 134
Score = 50 (22.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD 46
P V++GH V + F + L++ + L WD
Sbjct: 314 PSRVIKGHNKLVGTIAFDKNAGSLYSASYDASLLQWD 350
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 138 (53.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 37/144 (25%), Positives = 70/144 (48%)
Query: 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 294
+G D + +W PL HL V C+ + N +G D+ + L++
Sbjct: 401 SGSHDRTARLWSFDRT-YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-- 457
Query: 295 GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA 354
G+ V + R + + P+ K A+AG D+R+++++ G+ L+ H +
Sbjct: 458 GNSV--RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 355 VSFSSDCKLMASASEDSTVALWEL 378
++FS D L+ASAS D++V +W++
Sbjct: 516 LTFSPDSGLIASASMDNSVRVWDI 539
Score = 38 (18.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD 46
+LRGH V F L + + +R WD
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD 370
>FB|FBgn0038617 [details] [associations]
symbol:CG12333 species:7227 "Drosophila melanogaster"
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046331 HSSP:P16649
GeneTree:ENSGT00640000091456 OMA:TGLPRDM EMBL:AY094717
RefSeq:NP_650723.1 UniGene:Dm.12926 SMR:Q9VE73 IntAct:Q9VE73
MINT:MINT-1593181 EnsemblMetazoa:FBtr0083655 GeneID:42218
KEGG:dme:Dmel_CG12333 UCSC:CG12333-RA FlyBase:FBgn0038617
InParanoid:Q9VE73 OrthoDB:EOG434TNF GenomeRNAi:42218 NextBio:827735
Uniprot:Q9VE73
Length = 487
Score = 109 (43.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 33/133 (24%), Positives = 66/133 (49%)
Query: 247 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE 306
+R P T HL V+ S + I+G D+ +L++++ TG + + +
Sbjct: 264 LRTPLCEFTGPGGHLSVVVAADWLSSMDQIITGSWDRTAILWDVE--TGLPL--QPLTGH 319
Query: 307 RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG-SALAILKYHHATCNAVSFSSDCKLMA 365
++ S P ++ TA D R++++R+ A+++ + H T + F+ D K++
Sbjct: 320 DHELTHVSAHPTQRLVVTASRDTTFRLWDFREAIPAVSVFQGHTETVTSSVFARDDKVV- 378
Query: 366 SASEDSTVALWEL 378
S S+D T+ +WEL
Sbjct: 379 SGSDDRTIKVWEL 391
Score = 67 (28.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIW 45
+GH SV + FHQ + ++ G+ G IW
Sbjct: 199 QGHAGSVNSIKFHQQRDLVLTGSGDGTAHIW 229
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 106 (42.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 35/145 (24%), Positives = 64/145 (44%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
V++G DG I ++ + T + + L ++ SG D I ++ D
Sbjct: 142 VISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIF--DV 199
Query: 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352
+ G V E + P + P+S++ TA D +++Y+ + L H +
Sbjct: 200 AAGKVVQTLEGHA-MP-VRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWV 257
Query: 353 NAVSFSSDCKLMASASEDSTVALWE 377
V+FS D K AS+S D++V +W+
Sbjct: 258 LCVAFSEDGKHFASSSSDNSVKIWD 282
Score = 98 (39.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 43/148 (29%), Positives = 72/148 (48%)
Query: 239 DGSILVWDIRNPGIPLTAMKVHL---EPVLCLSIDES-CNGG-ISGGADQKIVLYNLDHS 293
D ++ +WD R+ K HL PV ++ S CN ISG D KI +Y+++
Sbjct: 106 DSTMCLWDARSGD------KKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVE-- 157
Query: 294 TGSCVIKKEINLE-RPGISGTSIR--PDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350
TG K E L+ + G SI PD K A+ D + I++ G + L+ H
Sbjct: 158 TG----KAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAM 213
Query: 351 TCNAVSFSSDCKLMASASEDSTVALWEL 378
++ FS + +L+ +AS+D + L+++
Sbjct: 214 PVRSLCFSPNSQLLLTASDDGHMKLYDV 241
Score = 65 (27.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/68 (29%), Positives = 30/68 (44%)
Query: 30 KPILFAGTTGGELRIWDTVQHRTVSSSW-VHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88
K L G +++WD + T+ + A G+VSVA S G + S D T+
Sbjct: 52 KDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVS-SDG-QTIASSSLDSTM 109
Query: 89 KCWDIENG 96
WD +G
Sbjct: 110 CLWDARSG 117
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 94 (38.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE 369
I+ ++ P+ K+ AT DR +++ L I H V FS +++A+AS
Sbjct: 479 INSVAVAPNDKLLATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMDQVLATASA 538
Query: 370 DSTVALWEL 378
D T+ LW L
Sbjct: 539 DGTIKLWAL 547
Score = 88 (36.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT-GPSIG 75
H A V + F T +L G G +R+WD V+H + G+V + T P
Sbjct: 105 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHH---FRGSPGVVHLVTFHPDPA 161
Query: 76 LNKVISQGRDGTVKCWDIEN 95
+ S D T++ W +++
Sbjct: 162 RLLLFSSAADATIRMWSLQD 181
>UNIPROTKB|E1BY92 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 EMBL:AADN02025704 IPI:IPI00685000
Ensembl:ENSGALT00000034682 ArrayExpress:E1BY92 Uniprot:E1BY92
Length = 420
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/167 (25%), Positives = 80/167 (47%)
Query: 216 CMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG 275
C+ ++ + Q + + G +G I +WD+ + L M H E V L+ + +G
Sbjct: 126 CVNIEWHRFKFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMD-HTEVVRDLTF--APDG 182
Query: 276 G---ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVR 332
+S D+ + +++L G+ + K + + + G + PDS I + G + V
Sbjct: 183 SLILVSASRDKTLRVWDLKDD-GNMM--KVLRGHQNWVYGCAFSPDSSILCSVGASKAVF 239
Query: 333 IYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379
+++ K S + L+ HH A FS D L+A+AS D+ V +W+ Y
Sbjct: 240 LWDMDKYSMIRKLEGHHNDVVACEFSPDGALLATASYDTRVYVWDPY 286
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/167 (25%), Positives = 80/167 (47%)
Query: 216 CMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG 275
C+ ++ + Q + + G +G I +WD+ + L M H E V L+ + +G
Sbjct: 126 CVNIEWHRFKFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMD-HTEVVRDLTF--APDG 182
Query: 276 G---ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVR 332
+S D+ + +++L G+ + K + + + G + PDS I + G + V
Sbjct: 183 SLILVSASRDKTLRVWDLKDD-GNMM--KVLRGHQNWVYGCAFSPDSSILCSVGASKAVF 239
Query: 333 IYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379
+++ K S + L+ HH A FS D L+A+AS D+ V +W+ Y
Sbjct: 240 LWDMDKYSMIRKLEGHHNDVVACEFSPDGALLATASYDTRVYVWDPY 286
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 99 (39.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 37/142 (26%), Positives = 59/142 (41%)
Query: 238 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC 297
ED SI VW + L ++ H V C +S D+ I ++ D ++ C
Sbjct: 122 EDKSIKVWSMYRQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTSKQC 178
Query: 298 VIKKEINLERPGISG-TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVS 356
V ++ G + P+ A+AG D VRI++ R L + H N +S
Sbjct: 179 VNNFSDSV---GFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLS 235
Query: 357 FSSDCKLMASASEDSTVALWEL 378
F + +AS D TV + +L
Sbjct: 236 FHPSGNSLVTASSDGTVKILDL 257
Score = 92 (37.4 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 269 IDESCNGGI--SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG 326
+D S NG S G+D + ++++ + + + + G++ S P TA
Sbjct: 192 VDFSPNGTCIASAGSDHAVRIWDIRMNR----LLQHYQVHSCGVNCLSFHPSGNSLVTAS 247
Query: 327 WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
D V+I + +G + L+ H VSFS D +L S D+ V +W
Sbjct: 248 SDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 77 (32.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/96 (26%), Positives = 39/96 (40%)
Query: 7 PPDPVA--VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHG 64
P DP+ +GH+A++T F + + L +W H H
Sbjct: 5 PEDPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDV-- 62
Query: 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSS 100
+ S+ P G N + S RD TV+ W ++ G SS
Sbjct: 63 VTSLQFSPQ-G-NLLASASRDKTVRLWVLDRKGKSS 96
Score = 70 (29.7 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 19/78 (24%), Positives = 32/78 (41%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI 74
+ H A V V F L + +++W + R + S + H+ H + P
Sbjct: 99 KAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHT--HWVRCAKFSPDG 156
Query: 75 GLNKVISQGRDGTVKCWD 92
L ++S D T+K WD
Sbjct: 157 RL--IVSCSEDKTIKIWD 172
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 114 (45.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/92 (27%), Positives = 49/92 (53%)
Query: 287 LYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK 346
LY ++ CV + + + ++ PD K+ A+A +D+ VR++ G +A +
Sbjct: 357 LYLWRNNQNKCV--ERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFR 414
Query: 347 YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H V++S+D +L+ S S+DST+ +W +
Sbjct: 415 GHVQAVYTVAWSADSRLIVSGSKDSTLKVWSV 446
Score = 61 (26.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/88 (25%), Positives = 39/88 (44%)
Query: 14 LRGHRASVTDVC---FHQTKPIL-FAGTTG-GELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
L GH+ + + +H+ A +G G+ RIWD + + + H+ A + +V
Sbjct: 200 LSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNA--VTAV 257
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENG 96
G G + + +D TVK W +G
Sbjct: 258 RWG---GAGLIYTSSKDRTVKMWRAADG 282
Score = 56 (24.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 26/110 (23%), Positives = 43/110 (39%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
GH +V + F L +G+ +R+WD + H ++ V+ P
Sbjct: 117 GHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHK--QWVLCVSWAPD-- 172
Query: 76 LNKVISQG-RDGTVKCWDIENGGLSSNPSLTIKTNSYHF-CKLSLVKEPY 123
K ++ G + G++ WD E G P + + H C L EPY
Sbjct: 173 -GKRLASGCKAGSIIIWDPETGQQKGRP---LSGHKKHINC---LAWEPY 215
Score = 53 (23.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 23/85 (27%), Positives = 32/85 (37%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWD--TVQH--RTVSSSWVHSAAHGIVSVATG 71
GH+ V V + L +G G + IWD T Q R +S H
Sbjct: 159 GHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRD 218
Query: 72 PSIGLNKVISQGRDGTVKCWDIENG 96
P K+ S DG + WD++ G
Sbjct: 219 PEC--RKLASASGDGDCRIWDVKLG 241
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 88 (36.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/83 (26%), Positives = 39/83 (46%)
Query: 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVSVAT 70
A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 93 ATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARR 152
Query: 71 GPSIGLNKVISQGRDGTVKCWDI 93
GP + + DGTVK WDI
Sbjct: 153 GPQLAC----TGSDDGTVKLWDI 171
Score = 85 (35.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 36/151 (23%), Positives = 70/151 (46%)
Query: 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292
+++G D I VWD+R + + +M+ H + V LS+ + +S D + ++++
Sbjct: 198 IISGGIDNDIKVWDLRQNKL-IYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRP 256
Query: 293 STGS--CV--IKKEI-NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY 347
CV + + N E+ + + SKIAA + DR V I++ + L
Sbjct: 257 FAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSA-DRFVYIWDTTTRRIVYKLPG 315
Query: 348 HHATCNAVSFSSDCKLMASASEDSTVALWEL 378
H + N V+F + ++ S S D + + E+
Sbjct: 316 HAGSVNEVAFHPEEPIVLSGSSDKRLYIGEI 346
Score = 76 (31.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 24/87 (27%), Positives = 41/87 (47%)
Query: 14 LRGHRASVTDVCFHQTK-PILFA-GTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
L+GH + V CF + P L G+ G +++WD R +S + ++SV
Sbjct: 137 LKGHTSFVNS-CFPARRGPQLACTGSDDGTVKLWDI---RKKASVHTFQNTYQVLSVTFN 192
Query: 72 PSIGLNKVISQGRDGTVKCWDIENGGL 98
+ +++IS G D +K WD+ L
Sbjct: 193 DTS--DQIISGGIDNDIKVWDLRQNKL 217
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 262 EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 321
+ VLC+ +G D KI ++ + +G C+ + E G++ S DS
Sbjct: 265 DAVLCMCFSRDTEMLATGAQDGKIKVWKIQ--SGQCLRRFE-RAHSKGVTCLSFSKDSSQ 321
Query: 322 AATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+A +D+ +RI+ + G L + H + N +F+ D + SAS D TV +W +
Sbjct: 322 ILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 262 EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 321
+ VLC+ +G D KI ++ + +G C+ + E G++ S DS
Sbjct: 265 DAVLCMCFSRDTEMLATGAQDGKIKVWKIQ--SGQCLRRFE-RAHSKGVTCLSFSKDSSQ 321
Query: 322 AATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+A +D+ +RI+ + G L + H + N +F+ D + SAS D TV +W +
Sbjct: 322 ILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 262 EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 321
+ VLC+ +G D KI ++ + +G C+ + E G++ S DS
Sbjct: 265 DAVLCMCFSRDTEMLATGAQDGKIKVWKIQ--SGQCLRRFE-RAHSKGVTCLSFSKDSSQ 321
Query: 322 AATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+A +D+ +RI+ + G L + H + N +F+ D + SAS D TV +W +
Sbjct: 322 ILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 262 EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 321
+ VLC+ +G D KI ++ + +G C+ + E G++ S DS
Sbjct: 265 DAVLCMCFSRDTEMLATGAQDGKIKVWKIQ--SGQCLRRFE-RAHSKGVTCLSFSKDSSQ 321
Query: 322 AATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+A +D+ +RI+ + G L + H + N +F+ D + SAS D TV +W +
Sbjct: 322 ILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 100 (40.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/106 (26%), Positives = 47/106 (44%)
Query: 276 GISGGADQKIVLYNL-DHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIY 334
G S +Q NL D S G CV+K + G++ S P + + DR+V+++
Sbjct: 177 GTSSFEEQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLW 236
Query: 335 NYRKGSALAI--LKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
A + + H ++V F L+ S ED T+ +W+L
Sbjct: 237 RMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDL 282
Score = 85 (35.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH V V FH+ P + + + +RIW+ + ++ H+ H ++ P+
Sbjct: 91 LTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHN--HFVMCAQFHPT 148
Query: 74 IGLNKVISQGRDGTVKCWDI 93
L ++S D T++ WDI
Sbjct: 149 DDL--IVSASLDETIRIWDI 166
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 103 (41.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 32/149 (21%), Positives = 63/149 (42%)
Query: 239 DGSILVWDIRNPGIPLTA-MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL-DHSTGS 296
D ++ +WD ++ A ++ H V +S +S + + D+ + ++ +
Sbjct: 81 DATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDEYE 140
Query: 297 CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG----SALAILKYHHATC 352
C +N + P I A+A +D +++Y S+ L H +T
Sbjct: 141 CAAV--LNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTV 198
Query: 353 NAVSFSSDCKLMASASEDSTVALWELYPP 381
++SF +AS S+D TV +W+ Y P
Sbjct: 199 WSISFDGSGNRLASCSDDQTVKIWQEYKP 227
Score = 68 (29.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/94 (29%), Positives = 38/94 (40%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIW-DTVQHRTVSSSWVHSAAHG--IVSVAT 70
L GHR +H +L +RIW + R V+ + V S H I VA
Sbjct: 10 LTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKT-VLSDGHSRTIRDVAW 68
Query: 71 GPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSL 104
P G + S D TV WD ++G N +L
Sbjct: 69 SPC-G-QYLASASFDATVAIWDKKSGEFECNATL 100
>RGD|1307030 [details] [associations]
symbol:Strn4 "striatin, calmodulin binding protein 4"
species:10116 "Rattus norvegicus" [GO:0008150 "biological_process"
evidence=ND] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0032403 "protein complex binding"
evidence=ISO;IPI] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0051721 "protein
phosphatase 2A binding" evidence=ISO] [GO:0070016 "armadillo repeat
domain binding" evidence=ISO] [GO:0000159 "protein phosphatase type
2A complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307030 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043197 InterPro:IPR013258
Pfam:PF08232 GeneTree:ENSGT00520000055597 CTD:29888 OMA:RPHEGSF
IPI:IPI00213355 RefSeq:NP_001100950.2 UniGene:Rn.137083
ProteinModelPortal:F1M6V8 PRIDE:F1M6V8 Ensembl:ENSRNOT00000021976
GeneID:308392 KEGG:rno:308392 UCSC:RGD:1307030 NextBio:658751
ArrayExpress:F1M6V8 Uniprot:F1M6V8
Length = 759
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 80/344 (23%), Positives = 138/344 (40%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW------VHS-A 61
+P LR H + + FH ++ L + G L++W+ + T + +H+
Sbjct: 435 NPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFR 494
Query: 62 AH-GIVSVATGPSIGLNK--VISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL 118
AH G V T +G N S G D + W I + L+ +P + Y LS
Sbjct: 495 AHRGPVLAVT---MGSNSEYCYSGGADARIHSWKIPD--LNMDPY-----DGYDPSVLSC 544
Query: 119 VKEPYANAKQANEPKDCYEREVGETVD-TDSLCDSKESNRSFEIIDDVPAE-G-PKYMAV 175
V E + +A +R + D T + D S S + E G P +A
Sbjct: 545 VLEGHGDAVWGLAFSPTSQRLASCSADGTIRIWDPSSSGSSCLCTFPMAGEHGIPTSVAF 604
Query: 176 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSP-NFSSKGRGMCMAVQAYLPSKSQGFVNVL 234
+ + V + + + T L+ GG+ S+G + + +Q +
Sbjct: 605 TSTEPAHV-VASFRSGD--TVLYDLEAGGALLTLESRGSSGPTQINQVVSHPNQPLT--I 659
Query: 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 294
++D I D R G + +M HL+ V CL++D + +SG D + L++LD+ T
Sbjct: 660 TAHDDRGIRFLDNRT-GKSVHSMVAHLDAVTCLAVDPNGVFLMSGSHDCSLRLWSLDNKT 718
Query: 295 GSCVIKKEINLERP----GISGTSIRPDSKIAATAGWDRRVRIY 334
CV +EI R I + P + A+AG D +++
Sbjct: 719 --CV--QEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVF 758
>UNIPROTKB|Q7ZYQ6 [details] [associations]
symbol:dcaf13 "DDB1- and CUL4-associated factor 13"
species:8355 "Xenopus laevis" [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOVERGEN:HBG056998 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:BC042261 RefSeq:NP_001080629.1 UniGene:Xl.21976
ProteinModelPortal:Q7ZYQ6 GeneID:380321 KEGG:xla:380321
Xenbase:XB-GENE-5791341 Uniprot:Q7ZYQ6
Length = 445
Score = 95 (38.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 33/143 (23%), Positives = 64/143 (44%)
Query: 239 DGSILVWDIRNPGIPLTAMKVHLEP-VLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC 297
D SI+++D R P PL + + + LC + E+ I A++ LY D
Sbjct: 218 DRSIVLYDKRKP-TPLKKIILEMRTNALCWNPMEAF---IFTAANENFNLYTYDMRYMDS 273
Query: 298 VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL---KYHHATCNA 354
+K ++ + P K +A +D+ +RI+ + G + + + H TC
Sbjct: 274 PVKVHMD-HVSAVLDVDYSPTGKELVSASFDKSIRIFPVQSGHSREVYHTKRMQHVTC-- 330
Query: 355 VSFSSDCKLMASASEDSTVALWE 377
V +S+D K + S++ + +W+
Sbjct: 331 VRWSADNKYVLCGSDEMNIRIWK 353
Score = 80 (33.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 27/100 (27%), Positives = 42/100 (42%)
Query: 11 VAVLRGHRASVTDVCFH-QTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVSV 68
+A L GHR V + H ++ + +G GE++IW+ + + H G+
Sbjct: 59 IASLDGHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVR 118
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN--PSLTI 106
G S + G D TVK W +E+ G P TI
Sbjct: 119 FCGTSF-----FTVGDDKTVKQWAMESPGYGEKVEPMRTI 153
>ZFIN|ZDB-GENE-060929-808 [details] [associations]
symbol:dcaf5 "ddb1 and cul4 associated factor 5"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-060929-808 Gene3D:2.130.10.10 SUPFAM:SSF50978
CTD:8816 KO:K11800 GeneTree:ENSGT00530000062951 EMBL:CR361558
EMBL:CABZ01003772 EMBL:CABZ01003773 EMBL:FP103009 EMBL:BC124494
IPI:IPI00503404 RefSeq:NP_001071020.1 UniGene:Dr.83785
Ensembl:ENSDART00000084867 GeneID:560257 KEGG:dre:560257
HOGENOM:HOG000205845 HOVERGEN:HBG095204 InParanoid:Q08BZ1
NextBio:20883350 Uniprot:Q08BZ1
Length = 789
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 39/160 (24%), Positives = 81/160 (50%)
Query: 233 VLAGYEDGSILVWD----IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 288
+++G +D +L+W I + P+ HL + CL+ D + SGG D++++L+
Sbjct: 67 LVSGGDDRRVLLWHMEKAIHSRAKPMKLKGEHLSNIFCLAFDSTNKRVFSGGNDEQVILH 126
Query: 289 NLDHSTGSCVIKKEINLERPGISGTSIRP-DSKIAATAGWDRRVRIYNYRK---GSALAI 344
+++ G + + L + G S+ P + + A++ D RV I++ R+ G +
Sbjct: 127 DVER--GETL---NVFLHDDAVYGLSVSPVNDNVFASSSDDGRVLIWDTREPPHGEPFCL 181
Query: 345 LKYHHATCNAVSFSS-DCKLMASASEDSTVALWELYPPHA 383
Y A ++V F+ + +L+A+A+ V LW++ P +
Sbjct: 182 ANYPSAF-HSVMFNPVEPRLLATANSKEGVGLWDIRKPRS 220
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 90 (36.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 317 PDSKIA-ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVAL 375
P+S I A+A +D VR+++ +G L H +V+FS D K +AS S D V +
Sbjct: 419 PNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHI 478
Query: 376 W 376
W
Sbjct: 479 W 479
Score = 87 (35.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW------VHS 60
PP+ VLRGH + V ++ +L +G+ RIW+ ++ S+ +
Sbjct: 168 PPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE 227
Query: 61 AAHGIVSVATGPSIGLNK---VISQGR-DGTVKCWDIENGGLSS 100
H + S S+ N +++ G DG + W ENG L+S
Sbjct: 228 GGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWT-ENGNLAS 270
>TAIR|locus:2121328 [details] [associations]
symbol:AT4G28450 "AT4G28450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0080008
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:AF372943
EMBL:AY045624 EMBL:AY143901 IPI:IPI00548928 RefSeq:NP_567810.5
UniGene:At.2008 ProteinModelPortal:Q93VK1 SMR:Q93VK1 STRING:Q93VK1
PRIDE:Q93VK1 EnsemblPlants:AT4G28450.1 GeneID:828962
KEGG:ath:AT4G28450 TAIR:At4g28450 InParanoid:Q93VK1
PhylomeDB:Q93VK1 ProtClustDB:CLSN2691268 Genevestigator:Q93VK1
Uniprot:Q93VK1
Length = 452
Score = 93 (37.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 27/95 (28%), Positives = 43/95 (45%)
Query: 11 VAVLRGHRASVTDVCFHQTKPIL---FAGTTGGELRIWDTVQHRTVSSSWVHSAA-HGIV 66
V + GHR V+ C + L F+ + G++R+WD RTV H A G+
Sbjct: 59 VGAMDGHRDGVS--CMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLT 116
Query: 67 SVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN 101
+ G N ++S G D TV+ W++ L +
Sbjct: 117 ASTDG-----NVLVSCGTDCTVRLWNVPRPSLEDS 146
Score = 82 (33.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 39/159 (24%), Positives = 65/159 (40%)
Query: 229 GFVNVLA-GYEDGSILVWDIRNPG-----IPLTAMK-VHLEPVLCLSIDESCNGGISGGA 281
G N+LA D SI ++D+R I +T + P+ +++ + G
Sbjct: 214 GEPNLLATSASDRSITIYDLRLSSAARKIIMMTKTNSIAWNPMEPMNLTAANEDGSCYSF 273
Query: 282 DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA 341
D + LD + CV K ++ + P + T +DR VRI+ Y G +
Sbjct: 274 DGR----KLDEA--KCVHKDHVS----AVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHS 323
Query: 342 LAILKYHHATCN---AVSFSSDCKLMASASEDSTVALWE 377
I YH V +S D + S S+D+ + LW+
Sbjct: 324 REI--YHTKRMQRVFCVKYSCDATYVISGSDDTNLRLWK 360
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 108 (43.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 38/162 (23%), Positives = 71/162 (43%)
Query: 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG---ISGGADQKIVL- 287
++++G D S ++WD+ + + H + C+++ + + I+ D+ I L
Sbjct: 438 HIISGSRDKSAMIWDLEKKE-SIAQLTGHTGVISCVALPKKPSTSMFAITASDDRTIKLW 496
Query: 288 --YNLDHSTGSCVIKKE---INLE------RPGISGTSIRPDSKIAATAGWDRRVRIYNY 336
++ S+G KK+ I+ I+ SI P+ KI ATA D V+++N
Sbjct: 497 KGFSTTSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAPNDKIFATASQDSYVKLWNV 556
Query: 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378
+ +K H V FS + + S D T+ +W L
Sbjct: 557 NNLEPITSIKAHRRGVWHVEFSPIDQCFLTCSADGTIKIWSL 598
Score = 73 (30.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 33/117 (28%), Positives = 49/117 (41%)
Query: 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGL 76
H VT + FH T L +R++D V V + S GI +G
Sbjct: 169 HDDVVTMLKFHPTLLKLVTVCLDLNIRVYDLVTKECVILTNHLSQISGITFSNSG----- 223
Query: 77 NKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPK 133
++IS GRD + WD+ LS NP TI ++L KE Y + + ++ K
Sbjct: 224 KELISSGRDKVLNVWDM----LSKNPKKTIPIYQELGGIITLPKESYNSLPENSKIK 276
Score = 57 (25.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 77 NKVISQGRDGTVKCWDIENGGLSSN 101
N V S D TVK WD+E G + N
Sbjct: 142 NIVASASSDKTVKVWDLEKGYCTHN 166
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 105 (42.0 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 38/154 (24%), Positives = 69/154 (44%)
Query: 223 LPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD 282
+P G + AG + S LVWDIR+ G + + + H + + + + +G D
Sbjct: 206 VPKCDTGNTFISAGADKHS-LVWDIRS-GQCVQSFEGHEADINTVRFHPNGDAFATGSDD 263
Query: 283 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL 342
L++L CV +KE ++ P ++G +I D RV +++ K +
Sbjct: 264 ATCRLFDLRADRQVCVYEKE-SILFP-VNGVDFSLSGRILFAGYGDYRVGVWDSLKCARH 321
Query: 343 AILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376
++L H + + S D + SAS D T+ +W
Sbjct: 322 SVLYGHENRISCLRTSPDGTAVCSASWDCTIRIW 355
Score = 52 (23.4 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 77 NKVISQGRDGTVKCWDIENGGLSSN 101
N +++ D T WD+E+G L N
Sbjct: 169 NLILTGSGDSTCAIWDVESGQLIQN 193
Score = 49 (22.3 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD--TV--QHR-TVSSSWVHSAA 62
+L+GH V + + K + + + G++ +WD T +H T+ ++WV + A
Sbjct: 63 ILKGHVGKVLCMDWSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACA 117
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 97 (39.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 29/138 (21%), Positives = 58/138 (42%)
Query: 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 294
AG +D + WD+ + + + HL V CL++ + + ++GG D ++++
Sbjct: 236 AG-DDKQVKCWDLEQNKV-IRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKM 293
Query: 295 GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA 354
+ N + RP T D ++ ++ R G ++ L +H + A
Sbjct: 294 QIFALSGHDNT----VCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRA 349
Query: 355 VSFSSDCKLMASASEDST 372
++ ASAS D+T
Sbjct: 350 MTLHPKENAFASASADNT 367
Score = 78 (32.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
V++GH V V F + G+ ++IWD V++ + G + G
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD------VATGVLKLTLTGHIEQVRGL 224
Query: 73 SIGLNK---VISQGRDGTVKCWDIE 94
++ N+ + S G D VKCWD+E
Sbjct: 225 AVS-NRHTYMFSAGDDKQVKCWDLE 248
WARNING: HSPs involving 270 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 383 383 0.00091 117 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 520
No. of states in DFA: 629 (67 KB)
Total size of DFA: 280 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.93u 0.15s 34.08t Elapsed: 00:00:02
Total cpu time: 33.99u 0.15s 34.14t Elapsed: 00:00:02
Start: Tue May 21 00:38:44 2013 End: Tue May 21 00:38:46 2013
WARNINGS ISSUED: 2