Query 016769
Match_columns 383
No_of_seqs 140 out of 1879
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 02:38:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016769.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016769hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271 Notchless-like WD40 re 100.0 2E-43 4.4E-48 301.9 24.1 346 8-377 105-479 (480)
2 KOG0272 U4/U6 small nuclear ri 100.0 3E-40 6.4E-45 285.9 20.9 288 13-377 170-458 (459)
3 KOG0286 G-protein beta subunit 100.0 3.9E-38 8.5E-43 261.0 31.1 295 10-377 47-343 (343)
4 KOG0265 U5 snRNP-specific prot 100.0 6.3E-36 1.4E-40 248.8 24.6 294 9-377 38-336 (338)
5 KOG0315 G-protein beta subunit 100.0 4.1E-33 8.8E-38 226.4 27.8 276 31-380 11-289 (311)
6 KOG0279 G protein beta subunit 100.0 1.3E-32 2.8E-37 227.0 29.6 292 10-379 7-313 (315)
7 KOG0295 WD40 repeat-containing 100.0 2.6E-33 5.7E-38 238.7 25.0 293 6-377 96-404 (406)
8 KOG0271 Notchless-like WD40 re 100.0 3.6E-33 7.9E-38 239.2 23.5 293 52-379 107-439 (480)
9 KOG0272 U4/U6 small nuclear ri 100.0 4.2E-34 9.2E-39 247.8 17.2 251 6-335 205-458 (459)
10 KOG0322 G-protein beta subunit 100.0 5.6E-33 1.2E-37 227.4 19.6 314 5-379 1-323 (323)
11 KOG0282 mRNA splicing factor [ 100.0 2.6E-33 5.6E-38 246.8 17.5 295 7-377 203-503 (503)
12 KOG0293 WD40 repeat-containing 100.0 4.7E-32 1E-36 234.4 22.1 302 4-382 210-516 (519)
13 KOG0319 WD40-repeat-containing 100.0 1.3E-31 2.9E-36 246.8 25.3 191 172-379 378-577 (775)
14 KOG0291 WD40-repeat-containing 100.0 2.4E-30 5.3E-35 238.9 32.4 346 11-381 138-510 (893)
15 KOG0318 WD40 repeat stress pro 100.0 3.4E-30 7.4E-35 229.2 32.2 343 6-382 178-563 (603)
16 PLN00181 protein SPA1-RELATED; 100.0 2.3E-30 5E-35 262.2 35.3 295 14-379 479-793 (793)
17 KOG0285 Pleiotropic regulator 100.0 3.1E-31 6.7E-36 225.6 24.2 292 7-379 140-439 (460)
18 KOG0263 Transcription initiati 100.0 2E-31 4.3E-36 247.8 21.7 145 232-381 507-651 (707)
19 cd00200 WD40 WD40 domain, foun 100.0 9.4E-30 2E-34 226.1 31.8 288 11-377 2-289 (289)
20 KOG0273 Beta-transducin family 100.0 2.6E-30 5.7E-35 227.1 25.9 290 11-379 171-482 (524)
21 KOG0288 WD40 repeat protein Ti 100.0 1.4E-31 3E-36 231.6 16.9 292 7-377 164-459 (459)
22 KOG0643 Translation initiation 100.0 1.8E-30 3.8E-35 213.1 21.4 288 12-378 4-316 (327)
23 KOG0281 Beta-TrCP (transducin 100.0 7.3E-32 1.6E-36 228.7 13.5 230 18-379 197-428 (499)
24 KOG0306 WD40-repeat-containing 100.0 8.4E-30 1.8E-34 235.2 27.7 186 172-379 386-580 (888)
25 KOG0296 Angio-associated migra 100.0 3.8E-29 8.3E-34 213.5 27.4 328 9-378 55-397 (399)
26 KOG0316 Conserved WD40 repeat- 100.0 1.2E-29 2.6E-34 204.7 21.6 252 6-381 5-259 (307)
27 KOG0319 WD40-repeat-containing 100.0 1.3E-29 2.8E-34 233.7 23.6 302 10-377 315-617 (775)
28 KOG0279 G protein beta subunit 100.0 1.5E-28 3.2E-33 203.0 24.4 255 9-337 54-313 (315)
29 KOG0315 G-protein beta subunit 100.0 4.8E-28 1E-32 196.9 24.6 263 18-358 40-309 (311)
30 KOG0278 Serine/threonine kinas 100.0 1.3E-29 2.8E-34 206.2 15.4 248 10-381 51-299 (334)
31 KOG0266 WD40 repeat-containing 100.0 1.3E-27 2.8E-32 226.3 31.2 292 11-379 151-454 (456)
32 KOG0313 Microtubule binding pr 100.0 4.1E-28 8.9E-33 208.1 23.4 309 6-379 94-418 (423)
33 KOG0291 WD40-repeat-containing 100.0 6.6E-27 1.4E-31 216.3 31.3 292 10-379 299-612 (893)
34 KOG0284 Polyadenylation factor 100.0 1.3E-28 2.7E-33 213.0 18.7 283 18-379 96-380 (464)
35 KOG0647 mRNA export protein (c 100.0 2.4E-27 5.1E-32 197.9 25.3 278 16-368 25-312 (347)
36 KOG0645 WD40 repeat protein [G 100.0 1.7E-26 3.6E-31 190.2 29.4 290 9-379 5-311 (312)
37 KOG0273 Beta-transducin family 100.0 5.8E-27 1.3E-31 206.2 27.6 280 18-379 235-523 (524)
38 KOG0281 Beta-TrCP (transducin 100.0 3.8E-29 8.3E-34 212.2 13.5 247 11-341 230-481 (499)
39 KOG0268 Sof1-like rRNA process 100.0 9E-29 2E-33 211.0 15.7 286 9-379 57-345 (433)
40 KOG0263 Transcription initiati 100.0 1.1E-27 2.4E-32 222.9 23.2 237 10-367 443-703 (707)
41 KOG1407 WD40 repeat protein [F 100.0 1.1E-26 2.3E-31 190.4 24.6 287 13-378 15-310 (313)
42 KOG0274 Cdc4 and related F-box 100.0 9.3E-27 2E-31 220.4 27.5 285 6-380 195-483 (537)
43 KOG0295 WD40 repeat-containing 100.0 1.6E-27 3.5E-32 203.4 19.4 254 11-336 143-405 (406)
44 KOG0318 WD40 repeat stress pro 100.0 1.6E-25 3.6E-30 199.5 32.3 327 10-379 224-602 (603)
45 KOG0306 WD40-repeat-containing 100.0 2.6E-26 5.7E-31 212.3 26.8 292 12-380 367-665 (888)
46 KOG0276 Vesicle coat complex C 100.0 3E-26 6.4E-31 208.0 24.1 285 13-375 8-295 (794)
47 KOG1036 Mitotic spindle checkp 100.0 9E-26 2E-30 189.2 24.6 285 18-382 13-319 (323)
48 KOG0292 Vesicle coat complex C 99.9 7.5E-26 1.6E-30 212.6 25.8 290 13-379 4-321 (1202)
49 KOG0285 Pleiotropic regulator 99.9 4.4E-26 9.5E-31 194.4 20.4 240 63-381 152-391 (460)
50 KOG0286 G-protein beta subunit 99.9 6.3E-25 1.4E-29 182.7 26.1 249 56-380 51-304 (343)
51 KOG0276 Vesicle coat complex C 99.9 7.6E-26 1.7E-30 205.3 20.5 240 63-378 14-256 (794)
52 KOG0283 WD40 repeat-containing 99.9 2.1E-25 4.5E-30 209.5 23.1 188 173-381 382-578 (712)
53 KOG0277 Peroxisomal targeting 99.9 3.5E-25 7.6E-30 180.9 20.4 285 22-378 12-308 (311)
54 KOG2096 WD40 repeat protein [G 99.9 7.3E-25 1.6E-29 184.4 22.6 303 11-379 79-402 (420)
55 KOG0300 WD40 repeat-containing 99.9 4.9E-25 1.1E-29 185.4 21.5 332 10-383 140-480 (481)
56 KOG0301 Phospholipase A2-activ 99.9 1.1E-24 2.3E-29 200.2 25.6 283 9-380 5-289 (745)
57 KOG1446 Histone H3 (Lys4) meth 99.9 1.5E-23 3.3E-28 176.6 29.7 290 9-378 5-302 (311)
58 KOG0275 Conserved WD40 repeat- 99.9 4.7E-25 1E-29 186.0 17.0 287 16-377 211-507 (508)
59 KOG0292 Vesicle coat complex C 99.9 1.1E-24 2.5E-29 204.7 20.8 247 63-382 10-283 (1202)
60 KOG0274 Cdc4 and related F-box 99.9 2.2E-24 4.7E-29 204.3 22.4 253 11-349 241-494 (537)
61 KOG0284 Polyadenylation factor 99.9 3E-25 6.5E-30 192.2 14.9 247 13-337 133-380 (464)
62 PLN00181 protein SPA1-RELATED; 99.9 5.4E-23 1.2E-27 208.6 32.4 272 39-379 457-738 (793)
63 KOG0266 WD40 repeat-containing 99.9 1.8E-23 4E-28 198.1 26.5 245 63-380 160-410 (456)
64 KOG0313 Microtubule binding pr 99.9 2.8E-23 6E-28 178.6 22.4 191 173-382 161-379 (423)
65 KOG0650 WD40 repeat nucleolar 99.9 1.5E-23 3.3E-28 189.7 21.8 331 3-376 385-732 (733)
66 KOG0308 Conserved WD40 repeat- 99.9 1.6E-23 3.4E-28 191.2 21.0 298 16-380 19-328 (735)
67 KOG0772 Uncharacterized conser 99.9 4.2E-23 9E-28 183.9 22.9 309 13-376 162-484 (641)
68 KOG0265 U5 snRNP-specific prot 99.9 7.1E-23 1.5E-27 171.2 22.7 241 63-379 48-296 (338)
69 KOG0641 WD40 repeat protein [G 99.9 3.9E-21 8.4E-26 154.8 31.7 292 16-379 30-349 (350)
70 KOG0299 U3 snoRNP-associated p 99.9 1.6E-22 3.4E-27 178.0 25.5 285 11-371 135-448 (479)
71 KOG0640 mRNA cleavage stimulat 99.9 6.7E-23 1.4E-27 172.1 21.8 305 3-379 96-426 (430)
72 PTZ00421 coronin; Provisional 99.9 2.7E-22 5.8E-27 189.8 28.2 231 12-360 69-314 (493)
73 KOG0310 Conserved WD40 repeat- 99.9 2E-22 4.2E-27 178.6 24.2 279 18-376 26-306 (487)
74 KOG4283 Transcription-coupled 99.9 3E-22 6.5E-27 167.1 23.3 296 12-378 37-364 (397)
75 KOG1408 WD40 repeat protein [F 99.9 3.8E-22 8.3E-27 183.9 24.3 324 22-379 328-713 (1080)
76 KOG0277 Peroxisomal targeting 99.9 1E-22 2.3E-27 166.5 18.2 245 18-336 60-308 (311)
77 KOG0282 mRNA splicing factor [ 99.9 4E-23 8.7E-28 182.7 15.7 242 63-379 215-462 (503)
78 KOG0305 Anaphase promoting com 99.9 1.1E-21 2.5E-26 179.7 24.9 243 16-380 215-462 (484)
79 KOG0294 WD40 repeat-containing 99.9 9.2E-22 2E-26 165.6 22.0 246 10-380 35-282 (362)
80 KOG2106 Uncharacterized conser 99.9 7.2E-21 1.6E-25 169.3 28.8 330 14-380 100-478 (626)
81 KOG1446 Histone H3 (Lys4) meth 99.9 1.5E-20 3.2E-25 158.6 29.0 247 63-382 15-265 (311)
82 KOG0264 Nucleosome remodeling 99.9 8.6E-22 1.9E-26 173.2 22.1 256 14-379 120-404 (422)
83 PTZ00421 coronin; Provisional 99.9 5E-21 1.1E-25 181.2 29.0 254 16-381 18-292 (493)
84 KOG0641 WD40 repeat protein [G 99.9 1.4E-20 3.1E-25 151.6 26.7 255 13-337 84-349 (350)
85 KOG0289 mRNA splicing factor [ 99.9 1.5E-21 3.2E-26 170.7 22.3 251 10-378 253-505 (506)
86 PTZ00420 coronin; Provisional 99.9 1.6E-20 3.5E-25 178.8 31.2 258 35-360 49-317 (568)
87 cd00200 WD40 WD40 domain, foun 99.9 2.1E-20 4.6E-25 165.8 28.1 240 63-379 10-249 (289)
88 KOG0288 WD40 repeat protein Ti 99.9 6.6E-22 1.4E-26 171.9 17.0 245 9-334 210-458 (459)
89 KOG0308 Conserved WD40 repeat- 99.9 9.5E-22 2.1E-26 179.7 17.9 304 7-378 61-392 (735)
90 KOG1539 WD repeat protein [Gen 99.9 8E-20 1.7E-24 171.5 30.6 339 18-377 244-646 (910)
91 KOG0316 Conserved WD40 repeat- 99.9 6.4E-21 1.4E-25 154.4 20.1 244 10-377 51-297 (307)
92 KOG0321 WD40 repeat-containing 99.9 2.3E-21 5.1E-26 176.8 19.5 283 13-380 95-392 (720)
93 KOG0296 Angio-associated migra 99.9 1E-20 2.2E-25 162.1 22.2 99 232-337 300-398 (399)
94 KOG1408 WD40 repeat protein [F 99.9 1.1E-20 2.4E-25 174.4 24.0 354 13-378 73-533 (1080)
95 KOG0293 WD40 repeat-containing 99.9 9.2E-22 2E-26 171.0 15.8 250 10-338 261-514 (519)
96 KOG0310 Conserved WD40 repeat- 99.9 1.3E-20 2.8E-25 167.1 21.6 242 16-336 66-308 (487)
97 KOG1274 WD40 repeat protein [G 99.9 3.9E-20 8.5E-25 175.3 25.7 246 15-379 10-262 (933)
98 KOG0647 mRNA export protein (c 99.9 1.9E-20 4E-25 156.9 20.8 244 62-379 27-281 (347)
99 KOG1063 RNA polymerase II elon 99.9 5.8E-20 1.3E-24 169.2 25.4 299 10-377 46-389 (764)
100 KOG2445 Nuclear pore complex c 99.9 5.1E-20 1.1E-24 154.7 22.8 260 15-378 10-317 (361)
101 PTZ00420 coronin; Provisional 99.9 8.5E-20 1.8E-24 173.9 26.1 183 176-379 49-248 (568)
102 KOG0772 Uncharacterized conser 99.9 1.6E-20 3.4E-25 167.6 18.9 260 64-378 169-444 (641)
103 KOG0645 WD40 repeat protein [G 99.9 2.1E-19 4.6E-24 148.5 24.1 190 173-379 29-225 (312)
104 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 8.9E-19 1.9E-23 157.9 30.5 272 30-380 1-280 (300)
105 KOG0299 U3 snoRNP-associated p 99.9 3.4E-20 7.3E-25 163.4 20.1 244 15-336 199-455 (479)
106 KOG2055 WD40 repeat protein [G 99.9 6.2E-20 1.3E-24 161.8 21.5 287 18-378 213-511 (514)
107 KOG0269 WD40 repeat-containing 99.9 3.5E-20 7.5E-25 172.7 18.9 284 18-375 39-336 (839)
108 KOG4328 WD40 protein [Function 99.9 3.1E-19 6.8E-24 157.2 23.3 301 10-378 178-494 (498)
109 KOG1517 Guanine nucleotide bin 99.9 2.7E-19 5.9E-24 171.7 24.8 303 21-381 1067-1383(1387)
110 KOG0643 Translation initiation 99.9 2.6E-19 5.6E-24 147.7 21.2 256 11-338 45-318 (327)
111 KOG0973 Histone transcription 99.9 4E-19 8.8E-24 171.6 25.6 269 13-379 7-355 (942)
112 KOG0268 Sof1-like rRNA process 99.8 2.6E-20 5.5E-25 159.6 14.1 250 10-342 101-350 (433)
113 KOG0264 Nucleosome remodeling 99.8 1.3E-19 2.9E-24 159.5 18.3 199 171-379 137-347 (422)
114 KOG0639 Transducin-like enhanc 99.8 4.4E-19 9.6E-24 157.9 21.6 283 15-378 416-703 (705)
115 KOG0301 Phospholipase A2-activ 99.8 3.7E-19 8E-24 164.0 19.5 179 171-379 71-249 (745)
116 KOG0646 WD40 repeat protein [G 99.8 7.1E-19 1.5E-23 155.4 20.3 238 18-362 81-332 (476)
117 KOG1332 Vesicle coat complex C 99.8 3.2E-19 7E-24 145.4 16.7 253 14-379 7-286 (299)
118 KOG0646 WD40 repeat protein [G 99.8 1.5E-18 3.3E-23 153.3 22.2 186 173-380 95-308 (476)
119 KOG0278 Serine/threonine kinas 99.8 8.5E-20 1.8E-24 149.2 13.0 143 232-381 114-256 (334)
120 KOG0275 Conserved WD40 repeat- 99.8 1.6E-20 3.4E-25 158.8 7.9 150 222-378 221-377 (508)
121 KOG0283 WD40 repeat-containing 99.8 7.3E-19 1.6E-23 165.7 19.1 217 8-337 359-576 (712)
122 KOG1407 WD40 repeat protein [F 99.8 2.3E-18 4.9E-23 141.7 19.4 237 64-376 22-258 (313)
123 KOG0300 WD40 repeat-containing 99.8 1.2E-18 2.6E-23 147.1 18.1 259 10-340 182-479 (481)
124 KOG1036 Mitotic spindle checkp 99.8 2.6E-18 5.6E-23 144.6 20.0 184 174-381 68-264 (323)
125 KOG1539 WD repeat protein [Gen 99.8 2.3E-17 5E-22 155.2 27.2 356 8-379 192-606 (910)
126 KOG0302 Ribosome Assembly prot 99.8 8.2E-19 1.8E-23 151.2 15.8 200 171-379 165-378 (440)
127 KOG2106 Uncharacterized conser 99.8 6.3E-17 1.4E-21 144.5 28.1 277 13-377 240-519 (626)
128 KOG0289 mRNA splicing factor [ 99.8 2.6E-18 5.7E-23 150.5 18.8 188 174-381 234-421 (506)
129 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 5.8E-17 1.3E-21 146.0 28.6 268 9-359 22-300 (300)
130 KOG1273 WD40 repeat protein [G 99.8 6.9E-17 1.5E-21 136.4 26.0 299 6-379 13-322 (405)
131 KOG1063 RNA polymerase II elon 99.8 8.1E-18 1.7E-22 155.3 22.2 297 13-380 262-649 (764)
132 KOG0267 Microtubule severing p 99.8 4.1E-20 8.8E-25 171.0 7.2 183 175-379 44-226 (825)
133 KOG0267 Microtubule severing p 99.8 1.8E-19 3.8E-24 166.8 10.8 238 13-371 23-260 (825)
134 KOG0270 WD40 repeat-containing 99.8 5.7E-18 1.2E-22 148.9 17.0 201 173-379 194-404 (463)
135 KOG0270 WD40 repeat-containing 99.8 9.9E-18 2.1E-22 147.4 17.5 211 16-342 241-454 (463)
136 KOG0640 mRNA cleavage stimulat 99.8 2.7E-18 5.9E-23 144.5 13.4 205 164-380 119-336 (430)
137 KOG1332 Vesicle coat complex C 99.8 1.1E-17 2.3E-22 136.6 16.3 233 8-337 46-286 (299)
138 KOG2048 WD40 repeat protein [G 99.8 1.4E-16 3.1E-21 146.9 25.6 259 4-379 3-275 (691)
139 KOG4378 Nuclear protein COP1 [ 99.8 3.2E-17 7E-22 146.0 20.3 186 173-380 93-281 (673)
140 KOG4227 WD40 repeat protein [G 99.8 3.7E-17 7.9E-22 141.8 19.1 298 13-379 51-387 (609)
141 KOG4283 Transcription-coupled 99.8 1.7E-16 3.7E-21 132.9 22.2 152 173-340 116-279 (397)
142 KOG2048 WD40 repeat protein [G 99.8 4.6E-16 1E-20 143.5 26.4 303 8-379 100-505 (691)
143 KOG0269 WD40 repeat-containing 99.8 2.3E-18 4.9E-23 160.7 11.0 147 232-382 102-253 (839)
144 KOG0642 Cell-cycle nuclear pro 99.8 1.3E-17 2.7E-22 150.8 14.9 263 10-381 286-563 (577)
145 KOG0294 WD40 repeat-containing 99.8 7.4E-17 1.6E-21 136.2 17.8 205 10-293 75-283 (362)
146 KOG0639 Transducin-like enhanc 99.7 5.1E-17 1.1E-21 144.9 16.3 188 167-378 475-662 (705)
147 KOG2096 WD40 repeat protein [G 99.7 1.7E-16 3.8E-21 134.2 17.9 116 259-379 185-308 (420)
148 KOG0307 Vesicle coat complex C 99.7 3.9E-17 8.5E-22 158.7 15.9 249 19-379 65-327 (1049)
149 KOG2919 Guanine nucleotide-bin 99.7 9.9E-16 2.1E-20 129.9 21.8 284 23-370 54-361 (406)
150 KOG1240 Protein kinase contain 99.7 9.4E-16 2E-20 149.9 23.3 308 10-377 1040-1431(1431)
151 KOG0302 Ribosome Assembly prot 99.7 2.7E-15 5.8E-20 129.7 22.0 140 232-373 272-433 (440)
152 KOG0305 Anaphase promoting com 99.7 1.8E-16 4E-21 145.7 15.7 183 172-379 190-376 (484)
153 KOG4378 Nuclear protein COP1 [ 99.7 1.1E-15 2.3E-20 136.5 19.6 264 20-360 36-304 (673)
154 KOG0321 WD40 repeat-containing 99.7 1E-15 2.2E-20 140.4 17.8 268 24-382 55-350 (720)
155 KOG1007 WD repeat protein TSSC 99.7 7.4E-15 1.6E-19 122.9 20.0 283 12-378 57-360 (370)
156 COG2319 FOG: WD40 repeat [Gene 99.7 1.4E-12 3.1E-17 122.0 36.4 292 13-380 60-360 (466)
157 KOG0973 Histone transcription 99.7 1.2E-15 2.5E-20 148.0 15.5 150 231-380 26-202 (942)
158 KOG1587 Cytoplasmic dynein int 99.7 4.1E-14 8.8E-19 133.9 24.4 145 232-379 362-516 (555)
159 PRK11028 6-phosphogluconolacto 99.7 3.6E-13 7.7E-18 123.4 30.0 199 167-380 89-305 (330)
160 KOG1188 WD40 repeat protein [G 99.7 1.9E-14 4.2E-19 123.0 19.0 279 31-378 41-345 (376)
161 KOG0650 WD40 repeat nucleolar 99.6 4.8E-15 1E-19 135.1 15.6 134 237-376 543-677 (733)
162 KOG0644 Uncharacterized conser 99.6 2.5E-15 5.5E-20 141.6 14.0 282 12-378 184-467 (1113)
163 KOG0642 Cell-cycle nuclear pro 99.6 2.7E-15 5.7E-20 136.0 13.7 220 8-294 334-564 (577)
164 KOG0771 Prolactin regulatory e 99.6 3.2E-14 6.9E-19 124.9 17.1 72 308-379 282-354 (398)
165 KOG1034 Transcriptional repres 99.6 1.2E-13 2.7E-18 117.6 19.4 298 13-378 33-382 (385)
166 KOG0303 Actin-binding protein 99.6 5.3E-14 1.2E-18 122.5 17.4 214 7-293 70-296 (472)
167 KOG2110 Uncharacterized conser 99.6 7.1E-12 1.5E-16 108.6 28.6 182 182-380 107-331 (391)
168 KOG2055 WD40 repeat protein [G 99.6 1.1E-13 2.4E-18 122.7 17.5 245 61-376 212-464 (514)
169 KOG1538 Uncharacterized conser 99.6 1.4E-13 3.1E-18 127.1 18.7 245 7-378 42-292 (1081)
170 KOG1034 Transcriptional repres 99.6 9.6E-14 2.1E-18 118.2 15.9 83 12-96 129-213 (385)
171 KOG2919 Guanine nucleotide-bin 99.6 5.2E-13 1.1E-17 113.6 20.2 192 173-381 125-329 (406)
172 COG2319 FOG: WD40 repeat [Gene 99.6 1.1E-11 2.3E-16 116.0 31.6 289 9-379 146-442 (466)
173 KOG3881 Uncharacterized conser 99.6 8.8E-13 1.9E-17 114.9 21.8 281 17-360 54-342 (412)
174 KOG1334 WD40 repeat protein [G 99.6 6.4E-14 1.4E-18 125.0 14.7 307 12-378 136-465 (559)
175 KOG1310 WD40 repeat protein [G 99.6 1E-13 2.2E-18 125.4 15.1 85 10-95 42-126 (758)
176 KOG4328 WD40 protein [Function 99.6 9.2E-13 2E-17 116.8 20.5 249 63-378 187-449 (498)
177 KOG1517 Guanine nucleotide bin 99.5 3.4E-13 7.4E-18 130.5 18.6 253 19-340 1110-1384(1387)
178 KOG1274 WD40 repeat protein [G 99.5 1.4E-12 3E-17 124.7 22.5 240 17-373 55-294 (933)
179 KOG1188 WD40 repeat protein [G 99.5 1.1E-13 2.5E-18 118.4 13.7 146 232-379 42-196 (376)
180 KOG0290 Conserved WD40 repeat- 99.5 3.1E-13 6.8E-18 113.3 14.9 148 231-379 164-318 (364)
181 KOG1963 WD40 repeat protein [G 99.5 1.1E-11 2.5E-16 118.2 27.1 301 16-380 203-539 (792)
182 KOG0307 Vesicle coat complex C 99.5 4.1E-14 8.8E-19 138.1 9.9 192 173-379 82-284 (1049)
183 PRK11028 6-phosphogluconolacto 99.5 3.7E-11 7.9E-16 110.1 28.3 264 10-337 27-304 (330)
184 KOG1963 WD40 repeat protein [G 99.5 1.3E-11 2.9E-16 117.7 25.5 334 23-381 21-377 (792)
185 KOG0322 G-protein beta subunit 99.5 1.1E-12 2.4E-17 108.7 15.7 158 168-336 162-322 (323)
186 KOG2445 Nuclear pore complex c 99.5 1.6E-12 3.5E-17 109.9 15.2 124 258-381 10-146 (361)
187 KOG1445 Tumor-specific antigen 99.5 2.4E-13 5.2E-18 125.0 10.4 144 236-379 599-750 (1012)
188 KOG0303 Actin-binding protein 99.5 3.9E-12 8.4E-17 111.0 17.3 142 232-378 96-248 (472)
189 PF08662 eIF2A: Eukaryotic tra 99.5 4.5E-12 9.7E-17 106.1 16.9 130 241-379 38-179 (194)
190 KOG2110 Uncharacterized conser 99.5 1.1E-11 2.4E-16 107.5 19.0 176 178-379 65-248 (391)
191 KOG1009 Chromatin assembly com 99.5 4.6E-13 1E-17 117.1 10.6 147 232-378 28-194 (434)
192 KOG1273 WD40 repeat protein [G 99.5 2.2E-12 4.8E-17 109.5 14.3 147 232-379 37-226 (405)
193 KOG0649 WD40 repeat protein [G 99.5 1.8E-11 3.9E-16 100.5 19.1 140 233-379 129-274 (325)
194 KOG0290 Conserved WD40 repeat- 99.4 1.4E-11 3E-16 103.6 17.8 253 15-333 93-361 (364)
195 KOG1009 Chromatin assembly com 99.4 3E-11 6.6E-16 105.9 19.8 85 11-97 58-156 (434)
196 KOG2111 Uncharacterized conser 99.4 6.3E-11 1.4E-15 100.9 20.4 178 181-381 75-258 (346)
197 KOG0649 WD40 repeat protein [G 99.4 9.8E-12 2.1E-16 102.0 13.7 145 232-379 24-186 (325)
198 KOG1587 Cytoplasmic dynein int 99.4 1.7E-10 3.7E-15 109.5 21.7 147 233-379 308-472 (555)
199 KOG2111 Uncharacterized conser 99.3 8.1E-09 1.8E-13 88.3 27.9 143 180-338 112-257 (346)
200 PRK01742 tolB translocation pr 99.3 2.5E-10 5.5E-15 108.1 20.5 114 237-360 311-426 (429)
201 KOG1445 Tumor-specific antigen 99.3 5.9E-11 1.3E-15 109.5 15.1 139 229-371 639-786 (1012)
202 KOG2394 WD40 protein DMR-N9 [G 99.3 1.8E-11 4E-16 110.8 11.6 149 232-381 187-364 (636)
203 KOG2394 WD40 protein DMR-N9 [G 99.3 2.6E-11 5.6E-16 109.9 12.2 123 232-358 234-383 (636)
204 KOG1240 Protein kinase contain 99.3 7.2E-10 1.6E-14 109.6 22.2 147 232-381 1165-1336(1431)
205 KOG1007 WD repeat protein TSSC 99.3 1.7E-10 3.6E-15 97.1 14.5 141 234-378 138-288 (370)
206 PRK01742 tolB translocation pr 99.3 6.6E-10 1.4E-14 105.3 20.1 188 164-379 210-401 (429)
207 KOG0644 Uncharacterized conser 99.3 3E-11 6.5E-16 114.7 10.6 250 7-341 221-472 (1113)
208 KOG3881 Uncharacterized conser 99.2 6E-10 1.3E-14 97.5 16.2 143 233-379 164-320 (412)
209 KOG1538 Uncharacterized conser 99.2 6.7E-10 1.5E-14 103.3 17.3 232 20-377 14-250 (1081)
210 KOG4547 WD40 repeat-containing 99.2 3.2E-09 6.9E-14 97.7 21.4 143 230-378 70-219 (541)
211 KOG1272 WD40-repeat-containing 99.2 9E-11 2E-15 104.6 10.2 264 22-371 133-401 (545)
212 KOG1310 WD40 repeat protein [G 99.2 8.3E-11 1.8E-15 106.9 9.3 126 255-383 44-182 (758)
213 KOG1523 Actin-related protein 99.2 1.5E-09 3.3E-14 92.7 15.7 149 232-381 69-238 (361)
214 KOG0974 WD-repeat protein WDR6 99.2 1.6E-09 3.6E-14 105.5 17.4 180 179-378 107-287 (967)
215 KOG1524 WD40 repeat-containing 99.1 7.1E-10 1.5E-14 100.7 13.0 140 232-379 77-216 (737)
216 PF02239 Cytochrom_D1: Cytochr 99.1 1.7E-07 3.6E-12 86.5 28.9 280 33-379 9-347 (369)
217 KOG1524 WD40 repeat-containing 99.1 4.5E-09 9.8E-14 95.6 17.0 129 233-370 119-247 (737)
218 PF02239 Cytochrom_D1: Cytochr 99.1 2.1E-08 4.5E-13 92.4 21.9 311 9-346 27-356 (369)
219 KOG4227 WD40 repeat protein [G 99.1 3.8E-09 8.2E-14 92.6 15.0 150 231-382 69-228 (609)
220 KOG2139 WD40 repeat protein [G 99.1 1.2E-08 2.6E-13 88.6 17.3 177 175-373 114-305 (445)
221 KOG2321 WD40 repeat protein [G 99.1 3.5E-08 7.6E-13 90.7 20.9 173 182-377 156-341 (703)
222 KOG1409 Uncharacterized conser 99.1 1.9E-08 4.2E-13 86.9 17.9 99 236-337 171-270 (404)
223 PF00400 WD40: WD domain, G-be 99.1 3.3E-10 7.2E-15 68.3 5.2 38 9-46 2-39 (39)
224 KOG0771 Prolactin regulatory e 99.1 2E-09 4.4E-14 95.1 11.7 144 232-379 158-311 (398)
225 KOG1523 Actin-related protein 99.0 5.5E-09 1.2E-13 89.3 13.5 146 232-379 24-176 (361)
226 KOG1354 Serine/threonine prote 99.0 3.3E-08 7.3E-13 85.4 17.9 71 308-379 273-359 (433)
227 KOG1272 WD40-repeat-containing 99.0 4E-10 8.6E-15 100.6 6.2 181 172-379 143-323 (545)
228 PRK03629 tolB translocation pr 99.0 2.3E-07 5E-12 87.9 23.4 111 240-359 309-427 (429)
229 PRK03629 tolB translocation pr 99.0 1.9E-07 4.1E-12 88.5 22.4 191 164-378 205-405 (429)
230 PRK02889 tolB translocation pr 98.9 1.6E-07 3.6E-12 88.9 20.9 186 164-371 202-392 (427)
231 PF00400 WD40: WD domain, G-be 98.9 3.9E-09 8.5E-14 63.5 5.9 38 340-377 2-39 (39)
232 KOG0974 WD-repeat protein WDR6 98.9 3.5E-08 7.6E-13 96.5 15.0 139 233-378 102-245 (967)
233 PRK04922 tolB translocation pr 98.9 6.8E-07 1.5E-11 84.9 22.7 190 165-378 211-410 (433)
234 PF10282 Lactonase: Lactonase, 98.8 8.1E-05 1.8E-09 68.5 34.2 203 171-379 99-322 (345)
235 PRK02889 tolB translocation pr 98.8 7.7E-07 1.7E-11 84.4 21.2 135 240-380 220-361 (427)
236 KOG2139 WD40 repeat protein [G 98.8 1E-07 2.3E-12 83.0 13.4 143 233-378 113-267 (445)
237 PRK04922 tolB translocation pr 98.8 1.1E-06 2.4E-11 83.5 21.9 133 239-379 227-368 (433)
238 PRK05137 tolB translocation pr 98.8 1.3E-06 2.8E-11 83.1 22.3 189 164-378 208-411 (435)
239 PF08662 eIF2A: Eukaryotic tra 98.8 3.2E-07 6.9E-12 76.8 16.0 101 233-344 76-185 (194)
240 KOG2315 Predicted translation 98.8 7.9E-06 1.7E-10 75.4 25.9 130 239-379 250-390 (566)
241 KOG1334 WD40 repeat protein [G 98.8 2.2E-07 4.9E-12 83.9 15.2 187 175-378 203-423 (559)
242 PF10282 Lactonase: Lactonase, 98.8 3E-05 6.5E-10 71.4 29.3 284 22-357 40-345 (345)
243 KOG1064 RAVE (regulator of V-A 98.8 6.9E-08 1.5E-12 99.2 12.5 204 14-346 2204-2407(2439)
244 KOG2321 WD40 repeat protein [G 98.8 5.7E-07 1.2E-11 82.9 16.6 145 233-379 148-302 (703)
245 TIGR02658 TTQ_MADH_Hv methylam 98.7 0.00012 2.6E-09 66.5 30.6 268 40-380 27-331 (352)
246 TIGR02800 propeller_TolB tol-p 98.7 4.2E-06 9.1E-11 79.3 21.5 132 240-379 214-354 (417)
247 PRK05137 tolB translocation pr 98.7 4E-06 8.6E-11 79.8 20.3 132 239-378 225-365 (435)
248 TIGR02800 propeller_TolB tol-p 98.7 6.1E-06 1.3E-10 78.2 21.3 184 164-373 196-388 (417)
249 KOG2695 WD40 repeat protein [G 98.7 8.8E-08 1.9E-12 83.0 7.7 145 234-381 228-378 (425)
250 COG5354 Uncharacterized protei 98.6 3.8E-05 8.3E-10 70.2 24.7 132 239-381 254-397 (561)
251 KOG4497 Uncharacterized conser 98.6 1.3E-06 2.9E-11 75.3 13.6 137 233-377 64-238 (447)
252 KOG1064 RAVE (regulator of V-A 98.6 2.4E-07 5.2E-12 95.4 10.6 172 175-381 2224-2400(2439)
253 COG5170 CDC55 Serine/threonine 98.6 1.6E-06 3.4E-11 74.4 13.4 69 308-377 281-365 (460)
254 KOG4532 WD40-like repeat conta 98.5 2.2E-05 4.7E-10 66.2 18.6 185 173-380 86-283 (344)
255 KOG3914 WD repeat protein WDR4 98.5 1.5E-06 3.3E-11 76.8 12.3 75 305-380 149-224 (390)
256 PRK01029 tolB translocation pr 98.5 3.9E-05 8.5E-10 72.6 21.8 135 241-379 258-403 (428)
257 KOG0280 Uncharacterized conser 98.5 7.4E-06 1.6E-10 69.8 14.7 143 233-379 88-241 (339)
258 PRK00178 tolB translocation pr 98.5 4.9E-05 1.1E-09 72.3 22.4 188 164-378 205-405 (430)
259 TIGR03300 assembly_YfgL outer 98.5 0.00025 5.4E-09 66.3 26.6 134 232-376 243-376 (377)
260 TIGR02658 TTQ_MADH_Hv methylam 98.5 0.00037 8.1E-09 63.3 26.5 108 232-345 208-338 (352)
261 PRK04792 tolB translocation pr 98.4 8.9E-05 1.9E-09 70.7 22.5 190 164-378 224-424 (448)
262 KOG0309 Conserved WD40 repeat- 98.4 3.3E-06 7.1E-11 80.3 11.8 145 232-379 172-339 (1081)
263 TIGR03300 assembly_YfgL outer 98.4 0.00046 9.9E-09 64.5 26.5 265 29-380 64-339 (377)
264 KOG4497 Uncharacterized conser 98.4 7.5E-05 1.6E-09 64.8 18.9 70 309-379 320-391 (447)
265 KOG2314 Translation initiation 98.4 0.00022 4.8E-09 66.1 22.6 127 240-371 425-559 (698)
266 KOG0882 Cyclophilin-related pe 98.4 5.8E-06 1.3E-10 74.3 12.1 144 235-379 117-305 (558)
267 COG2706 3-carboxymuconate cycl 98.4 0.0016 3.4E-08 57.6 31.1 289 16-358 37-345 (346)
268 KOG1354 Serine/threonine prote 98.3 4.5E-06 9.8E-11 72.5 10.1 120 259-380 162-302 (433)
269 PLN02919 haloacid dehalogenase 98.3 0.00016 3.5E-09 75.7 22.5 147 232-380 697-889 (1057)
270 KOG4714 Nucleoporin [Nuclear s 98.3 1.5E-06 3.3E-11 72.7 5.8 139 232-379 103-254 (319)
271 KOG4547 WD40 repeat-containing 98.3 5E-05 1.1E-09 70.6 15.9 101 276-380 73-173 (541)
272 PRK04792 tolB translocation pr 98.3 0.0003 6.5E-09 67.1 21.9 128 241-376 243-377 (448)
273 PRK00178 tolB translocation pr 98.3 0.00019 4.1E-09 68.3 20.6 132 240-379 223-363 (430)
274 KOG0280 Uncharacterized conser 98.3 9.2E-05 2E-09 63.3 16.0 126 232-360 135-264 (339)
275 COG4946 Uncharacterized protei 98.2 0.00052 1.1E-08 62.6 21.4 133 239-379 340-477 (668)
276 COG5170 CDC55 Serine/threonine 98.2 1.1E-05 2.4E-10 69.3 9.7 120 259-381 170-311 (460)
277 PF11768 DUF3312: Protein of u 98.2 9.9E-05 2.2E-09 69.2 16.8 71 307-379 259-329 (545)
278 KOG4532 WD40-like repeat conta 98.2 7.5E-05 1.6E-09 63.0 14.1 144 232-379 86-233 (344)
279 PRK01029 tolB translocation pr 98.2 0.00047 1E-08 65.3 20.7 136 240-379 211-359 (428)
280 PLN02919 haloacid dehalogenase 98.1 0.0023 5E-08 67.3 27.2 110 232-341 754-892 (1057)
281 KOG4190 Uncharacterized conser 98.1 1.6E-05 3.5E-10 73.3 9.2 144 232-379 749-906 (1034)
282 KOG3914 WD repeat protein WDR4 98.1 8.6E-06 1.9E-10 72.2 7.0 84 13-100 146-229 (390)
283 KOG2315 Predicted translation 98.1 0.0014 3E-08 61.0 21.3 114 233-359 287-410 (566)
284 smart00320 WD40 WD40 repeats. 98.1 7.6E-06 1.6E-10 47.9 4.5 38 9-46 3-40 (40)
285 PRK04043 tolB translocation pr 98.0 0.00084 1.8E-08 63.3 18.8 186 163-376 193-395 (419)
286 KOG2695 WD40 repeat protein [G 97.9 0.0001 2.2E-09 64.4 9.6 124 232-358 266-401 (425)
287 smart00320 WD40 WD40 repeats. 97.9 4.6E-05 1E-09 44.3 5.4 38 340-377 3-40 (40)
288 KOG1409 Uncharacterized conser 97.8 0.00071 1.5E-08 59.3 14.0 145 233-379 39-227 (404)
289 COG2706 3-carboxymuconate cycl 97.8 0.0044 9.5E-08 54.9 18.3 142 239-380 15-176 (346)
290 PF15492 Nbas_N: Neuroblastoma 97.8 0.0055 1.2E-07 52.7 18.1 146 232-379 57-259 (282)
291 KOG1275 PAB-dependent poly(A) 97.8 0.00064 1.4E-08 66.8 13.9 138 232-377 189-340 (1118)
292 KOG0309 Conserved WD40 repeat- 97.8 6.7E-05 1.4E-09 71.7 6.9 143 233-379 85-232 (1081)
293 KOG2444 WD40 repeat protein [G 97.7 7.8E-05 1.7E-09 61.7 6.3 142 233-379 33-177 (238)
294 KOG1912 WD40 repeat protein [G 97.7 0.0078 1.7E-07 58.5 20.3 87 9-97 46-146 (1062)
295 COG4946 Uncharacterized protei 97.7 0.0014 3E-08 59.9 14.3 125 233-366 374-505 (668)
296 PF15492 Nbas_N: Neuroblastoma 97.7 0.0092 2E-07 51.3 17.9 45 306-350 228-272 (282)
297 KOG4190 Uncharacterized conser 97.7 6.3E-05 1.4E-09 69.5 5.3 122 254-379 728-859 (1034)
298 COG5354 Uncharacterized protei 97.6 0.031 6.8E-07 51.8 21.9 88 283-378 255-347 (561)
299 PF08450 SGL: SMP-30/Gluconola 97.5 0.016 3.5E-07 50.5 18.2 140 233-379 15-164 (246)
300 KOG2041 WD40 repeat protein [G 97.5 0.011 2.5E-07 56.9 17.4 80 12-93 65-144 (1189)
301 KOG2041 WD40 repeat protein [G 97.4 0.0005 1.1E-08 65.8 8.1 140 232-378 28-185 (1189)
302 PF13360 PQQ_2: PQQ-like domai 97.4 0.068 1.5E-06 46.1 20.8 177 178-380 43-231 (238)
303 PRK11138 outer membrane biogen 97.4 0.12 2.6E-06 48.6 26.6 135 232-378 258-393 (394)
304 PF04762 IKI3: IKI3 family; I 97.3 0.27 5.8E-06 51.3 33.4 115 261-379 304-456 (928)
305 KOG2066 Vacuolar assembly/sort 97.3 0.0061 1.3E-07 59.4 13.5 130 232-379 51-187 (846)
306 KOG1645 RING-finger-containing 97.3 0.00081 1.7E-08 60.1 6.9 76 306-382 192-269 (463)
307 PF08553 VID27: VID27 cytoplas 97.3 0.01 2.2E-07 59.5 15.0 139 236-378 500-646 (794)
308 PF11768 DUF3312: Protein of u 97.2 0.0022 4.7E-08 60.4 9.0 73 260-338 258-330 (545)
309 PF08553 VID27: VID27 cytoplas 97.2 0.027 6E-07 56.5 17.1 146 171-336 494-646 (794)
310 KOG4714 Nucleoporin [Nuclear s 97.2 0.0036 7.9E-08 52.9 9.4 60 232-291 194-254 (319)
311 PF03178 CPSF_A: CPSF A subuni 97.1 0.2 4.3E-06 45.6 22.7 133 240-379 62-202 (321)
312 PF13360 PQQ_2: PQQ-like domai 97.1 0.068 1.5E-06 46.1 17.7 148 180-349 2-152 (238)
313 PRK02888 nitrous-oxide reducta 97.1 0.18 3.8E-06 49.2 21.1 95 282-379 295-404 (635)
314 KOG3621 WD40 repeat-containing 97.0 0.0041 9E-08 59.7 9.3 110 267-379 39-154 (726)
315 PRK11138 outer membrane biogen 96.9 0.36 7.9E-06 45.3 27.0 173 178-380 167-354 (394)
316 KOG1912 WD40 repeat protein [G 96.9 0.08 1.7E-06 51.8 16.5 193 171-377 79-302 (1062)
317 KOG4640 Anaphase-promoting com 96.9 0.0059 1.3E-07 57.9 8.8 73 309-382 22-95 (665)
318 PF08450 SGL: SMP-30/Gluconola 96.8 0.19 4E-06 43.8 17.8 104 261-365 133-241 (246)
319 PRK04043 tolB translocation pr 96.8 0.18 4E-06 47.6 18.6 110 263-378 189-308 (419)
320 PF07433 DUF1513: Protein of u 96.8 0.32 6.9E-06 43.2 18.4 108 259-371 160-278 (305)
321 KOG1275 PAB-dependent poly(A) 96.7 0.012 2.7E-07 58.2 10.2 140 171-335 188-340 (1118)
322 KOG2314 Translation initiation 96.7 0.029 6.3E-07 52.6 12.0 107 264-378 213-333 (698)
323 KOG2114 Vacuolar assembly/sort 96.7 0.049 1.1E-06 53.8 14.0 146 232-379 37-201 (933)
324 KOG2114 Vacuolar assembly/sort 96.6 0.15 3.2E-06 50.6 16.6 135 241-379 93-243 (933)
325 KOG0882 Cyclophilin-related pe 96.3 0.019 4.2E-07 52.4 8.0 145 232-379 22-174 (558)
326 PF14783 BBS2_Mid: Ciliary BBS 96.3 0.3 6.6E-06 36.2 14.7 91 274-375 16-110 (111)
327 KOG2395 Protein involved in va 96.2 0.092 2E-06 49.3 12.0 139 233-376 349-497 (644)
328 PF04762 IKI3: IKI3 family; I 96.2 2 4.3E-05 45.0 28.5 72 308-379 427-519 (928)
329 PF14783 BBS2_Mid: Ciliary BBS 96.1 0.33 7.2E-06 36.0 12.4 91 230-332 15-109 (111)
330 KOG4640 Anaphase-promoting com 96.1 0.043 9.3E-07 52.4 9.6 91 264-359 23-115 (665)
331 KOG1832 HIV-1 Vpr-binding prot 96.1 0.0036 7.8E-08 61.7 2.7 139 231-382 1114-1258(1516)
332 PF12894 Apc4_WD40: Anaphase-p 96.0 0.021 4.4E-07 35.3 4.9 30 18-47 11-40 (47)
333 PF12894 Apc4_WD40: Anaphase-p 96.0 0.025 5.5E-07 34.9 5.1 31 349-379 11-41 (47)
334 KOG2066 Vacuolar assembly/sort 96.0 0.042 9.1E-07 53.8 9.0 88 275-376 51-143 (846)
335 KOG1920 IkappaB kinase complex 95.8 1.1 2.4E-05 46.5 18.1 108 266-378 200-321 (1265)
336 KOG3617 WD40 and TPR repeat-co 95.7 0.021 4.5E-07 56.3 5.9 70 310-379 62-131 (1416)
337 KOG1008 Uncharacterized conser 95.7 0.0047 1E-07 58.7 1.4 136 238-379 127-275 (783)
338 PF08596 Lgl_C: Lethal giant l 95.6 0.91 2E-05 42.5 16.3 148 232-379 99-290 (395)
339 KOG1008 Uncharacterized conser 95.5 0.0053 1.2E-07 58.4 1.0 143 233-378 73-224 (783)
340 KOG3617 WD40 and TPR repeat-co 95.2 0.65 1.4E-05 46.4 13.8 69 22-94 63-131 (1416)
341 COG3386 Gluconolactonase [Carb 95.1 1.6 3.5E-05 39.3 15.6 72 308-379 111-193 (307)
342 KOG1645 RING-finger-containing 95.0 0.063 1.4E-06 48.5 6.0 87 7-97 182-269 (463)
343 KOG2079 Vacuolar assembly/sort 95.0 0.11 2.5E-06 52.7 8.4 98 276-378 102-202 (1206)
344 COG3386 Gluconolactonase [Carb 94.9 1 2.2E-05 40.6 13.7 109 261-370 162-277 (307)
345 KOG2444 WD40 repeat protein [G 94.9 0.084 1.8E-06 44.2 6.2 103 232-338 72-178 (238)
346 COG0823 TolB Periplasmic compo 94.7 2.2 4.7E-05 40.5 16.0 162 181-367 218-387 (425)
347 KOG3621 WD40 repeat-containing 94.5 0.34 7.4E-06 47.1 10.0 104 232-338 47-155 (726)
348 PF03178 CPSF_A: CPSF A subuni 94.4 2.7 5.8E-05 38.2 15.6 138 233-375 101-261 (321)
349 KOG2079 Vacuolar assembly/sort 94.4 0.12 2.5E-06 52.6 7.0 72 18-93 130-202 (1206)
350 KOG1916 Nuclear protein, conta 94.4 0.025 5.4E-07 56.1 2.3 69 310-379 186-265 (1283)
351 PF10168 Nup88: Nuclear pore c 94.3 1.6 3.4E-05 44.2 14.6 74 308-382 85-182 (717)
352 PF08596 Lgl_C: Lethal giant l 94.2 2.1 4.5E-05 40.1 14.4 75 305-380 84-174 (395)
353 PF04053 Coatomer_WDAD: Coatom 94.2 0.96 2.1E-05 43.0 12.3 56 319-378 117-172 (443)
354 COG0823 TolB Periplasmic compo 93.9 0.7 1.5E-05 43.7 10.9 121 240-370 218-346 (425)
355 PF07433 DUF1513: Protein of u 93.9 4.4 9.6E-05 36.1 22.7 141 237-380 74-248 (305)
356 KOG1832 HIV-1 Vpr-binding prot 93.3 0.12 2.5E-06 51.6 4.6 74 306-379 1100-1175(1516)
357 PF00780 CNH: CNH domain; Int 93.1 5.9 0.00013 34.9 17.0 140 232-379 9-165 (275)
358 PRK13616 lipoprotein LpqB; Pro 92.6 2.7 6E-05 41.6 13.1 105 262-375 350-472 (591)
359 KOG2395 Protein involved in va 92.4 4.6 0.0001 38.4 13.3 98 233-336 397-499 (644)
360 PF06977 SdiA-regulated: SdiA- 92.1 7.5 0.00016 33.8 18.1 135 232-367 78-239 (248)
361 PRK02888 nitrous-oxide reducta 92.1 13 0.00029 36.7 19.5 98 239-338 295-405 (635)
362 PF02897 Peptidase_S9_N: Proly 91.4 2.1 4.6E-05 40.4 10.7 70 310-381 126-212 (414)
363 PF05694 SBP56: 56kDa selenium 91.3 10 0.00023 35.5 14.3 101 237-339 219-344 (461)
364 PF07569 Hira: TUP1-like enhan 91.3 1.7 3.7E-05 37.0 8.9 64 315-379 18-95 (219)
365 KOG1920 IkappaB kinase complex 91.3 5.3 0.00012 41.8 13.4 67 263-334 70-136 (1265)
366 KOG4460 Nuclear pore complex, 91.1 4.5 9.8E-05 38.5 11.8 75 309-383 105-202 (741)
367 PF06433 Me-amine-dh_H: Methyl 90.5 13 0.00029 33.7 20.1 179 181-380 118-321 (342)
368 PF00930 DPPIV_N: Dipeptidyl p 90.2 0.61 1.3E-05 43.1 5.6 89 283-377 23-129 (353)
369 KOG4499 Ca2+-binding protein R 90.0 6 0.00013 33.7 10.5 60 311-370 215-276 (310)
370 KOG4649 PQQ (pyrrolo-quinoline 89.7 6.5 0.00014 34.0 10.6 61 318-379 62-123 (354)
371 PF14655 RAB3GAP2_N: Rab3 GTPa 89.2 2.4 5.2E-05 39.8 8.7 71 309-379 309-398 (415)
372 PF00930 DPPIV_N: Dipeptidyl p 88.9 1.2 2.6E-05 41.1 6.6 50 328-379 22-71 (353)
373 PF14655 RAB3GAP2_N: Rab3 GTPa 88.6 4.8 0.0001 37.9 10.1 91 7-97 296-401 (415)
374 PF14583 Pectate_lyase22: Olig 88.3 21 0.00046 33.1 13.8 72 310-381 285-383 (386)
375 PF10313 DUF2415: Uncharacteri 88.0 1.6 3.5E-05 26.2 4.3 31 19-49 1-34 (43)
376 PF05694 SBP56: 56kDa selenium 88.0 7.8 0.00017 36.3 10.9 99 281-383 220-346 (461)
377 PF07676 PD40: WD40-like Beta 88.0 3 6.4E-05 24.2 5.7 29 348-376 7-38 (39)
378 COG3391 Uncharacterized conser 87.9 23 0.00051 33.1 18.1 138 233-378 89-238 (381)
379 PF12234 Rav1p_C: RAVE protein 87.7 23 0.00049 35.3 14.5 92 281-378 49-155 (631)
380 COG3391 Uncharacterized conser 87.6 25 0.00053 32.9 21.8 191 167-378 83-282 (381)
381 cd00216 PQQ_DH Dehydrogenases 87.5 29 0.00063 33.7 26.5 96 275-380 303-425 (488)
382 TIGR02276 beta_rpt_yvtn 40-res 87.3 3.6 7.8E-05 24.1 5.9 31 317-347 1-32 (42)
383 KOG4649 PQQ (pyrrolo-quinoline 87.3 19 0.00041 31.3 14.9 108 232-346 25-132 (354)
384 PF10313 DUF2415: Uncharacteri 86.3 2.6 5.6E-05 25.3 4.6 29 351-379 2-33 (43)
385 KOG2377 Uncharacterized conser 86.1 23 0.00051 33.3 12.6 102 259-362 64-166 (657)
386 PF12234 Rav1p_C: RAVE protein 85.7 18 0.00039 36.0 12.6 68 310-377 32-102 (631)
387 TIGR02604 Piru_Ver_Nterm putat 84.7 22 0.00048 33.0 12.5 62 308-370 124-204 (367)
388 PF14870 PSII_BNR: Photosynthe 84.3 14 0.0003 33.2 10.4 69 308-377 145-213 (302)
389 KOG4499 Ca2+-binding protein R 83.8 17 0.00036 31.1 9.8 73 308-381 109-190 (310)
390 PF12657 TFIIIC_delta: Transcr 83.3 8.3 0.00018 31.5 8.0 29 351-379 87-121 (173)
391 PHA02713 hypothetical protein; 83.1 23 0.0005 35.1 12.4 59 318-378 463-532 (557)
392 TIGR02604 Piru_Ver_Nterm putat 83.1 13 0.00029 34.4 10.4 57 309-368 73-142 (367)
393 PF07995 GSDH: Glucose / Sorbo 82.8 33 0.00072 31.3 12.6 106 264-371 4-135 (331)
394 PF11715 Nup160: Nucleoporin N 82.5 11 0.00023 37.2 10.0 36 310-345 217-256 (547)
395 PF08728 CRT10: CRT10; InterP 82.3 18 0.00038 36.5 11.0 105 274-378 115-245 (717)
396 PF14870 PSII_BNR: Photosynthe 81.7 40 0.00086 30.4 17.5 106 261-373 144-256 (302)
397 PF00780 CNH: CNH domain; Int 81.6 23 0.00051 31.1 11.0 102 272-381 6-124 (275)
398 PF14727 PHTB1_N: PTHB1 N-term 80.8 52 0.0011 31.2 18.7 143 232-378 39-203 (418)
399 PF04841 Vps16_N: Vps16, N-ter 79.1 17 0.00036 34.5 9.5 48 330-379 62-109 (410)
400 COG3490 Uncharacterized protei 79.0 7 0.00015 34.3 6.2 61 314-376 120-186 (366)
401 cd00216 PQQ_DH Dehydrogenases 78.9 66 0.0014 31.2 19.7 67 313-379 222-319 (488)
402 smart00564 PQQ beta-propeller 77.9 6.5 0.00014 21.5 4.1 25 321-345 8-32 (33)
403 KOG1897 Damage-specific DNA bi 77.8 95 0.0021 32.5 26.1 92 282-378 806-897 (1096)
404 COG5167 VID27 Protein involved 77.6 18 0.0004 34.5 8.9 60 318-378 572-631 (776)
405 PF10647 Gmad1: Lipoprotein Lp 75.6 54 0.0012 28.6 12.8 67 309-375 67-140 (253)
406 PF11715 Nup160: Nucleoporin N 75.6 3.7 8E-05 40.5 4.3 34 20-53 216-253 (547)
407 TIGR03606 non_repeat_PQQ dehyd 75.4 79 0.0017 30.3 15.0 106 263-370 31-166 (454)
408 PRK13616 lipoprotein LpqB; Pro 75.0 94 0.002 31.0 14.6 69 308-378 448-524 (591)
409 PF01011 PQQ: PQQ enzyme repea 74.8 8.6 0.00019 22.2 4.1 25 322-346 3-27 (38)
410 KOG3630 Nuclear pore complex, 74.1 18 0.00039 38.0 8.5 116 263-378 102-227 (1405)
411 COG5276 Uncharacterized conser 73.3 68 0.0015 28.6 17.7 142 233-382 99-244 (370)
412 PF08728 CRT10: CRT10; InterP 73.1 58 0.0013 33.0 11.6 104 231-336 115-245 (717)
413 PRK10115 protease 2; Provision 72.6 27 0.00058 35.6 9.6 71 309-381 128-209 (686)
414 PF04053 Coatomer_WDAD: Coatom 72.5 93 0.002 29.8 12.9 129 239-379 125-262 (443)
415 KOG1900 Nuclear pore complex, 71.8 55 0.0012 35.2 11.4 139 238-380 97-273 (1311)
416 PF06433 Me-amine-dh_H: Methyl 71.5 25 0.00054 32.0 8.0 63 281-346 265-329 (342)
417 PF05096 Glu_cyclase_2: Glutam 71.2 72 0.0016 28.0 11.2 106 266-378 49-156 (264)
418 PF01436 NHL: NHL repeat; Int 70.9 14 0.0003 19.7 4.1 25 352-376 4-28 (28)
419 KOG4441 Proteins containing BT 70.4 69 0.0015 31.9 11.6 133 233-373 288-440 (571)
420 PF07569 Hira: TUP1-like enhan 70.1 24 0.00052 30.1 7.4 64 272-338 21-96 (219)
421 PHA02713 hypothetical protein; 70.1 1.2E+02 0.0026 30.1 13.5 49 276-328 355-408 (557)
422 KOG2377 Uncharacterized conser 70.0 41 0.0009 31.8 9.1 33 348-380 65-97 (657)
423 KOG4441 Proteins containing BT 69.5 1.2E+02 0.0027 30.1 16.2 132 232-371 335-486 (571)
424 PF02897 Peptidase_S9_N: Proly 68.9 1E+02 0.0023 28.9 17.1 101 237-339 147-262 (414)
425 COG3204 Uncharacterized protei 68.3 79 0.0017 28.2 10.1 75 306-381 84-160 (316)
426 PF14269 Arylsulfotran_2: Aryl 67.6 29 0.00063 31.2 7.8 69 310-378 146-219 (299)
427 PF04841 Vps16_N: Vps16, N-ter 66.5 1.2E+02 0.0026 28.7 24.5 53 308-360 217-270 (410)
428 PF08801 Nucleoporin_N: Nup133 66.0 1.2E+02 0.0026 28.7 14.4 30 351-380 191-220 (422)
429 PF10168 Nup88: Nuclear pore c 65.7 1.1E+02 0.0023 31.5 12.0 76 263-339 86-181 (717)
430 PF10647 Gmad1: Lipoprotein Lp 64.6 97 0.0021 27.0 16.8 108 263-371 67-187 (253)
431 COG4590 ABC-type uncharacteriz 64.2 59 0.0013 30.8 8.9 108 232-345 282-394 (733)
432 KOG3630 Nuclear pore complex, 64.0 33 0.00071 36.2 7.9 90 233-324 171-260 (1405)
433 PF15390 DUF4613: Domain of un 63.8 1.6E+02 0.0034 29.1 13.1 118 261-378 56-185 (671)
434 PF06977 SdiA-regulated: SdiA- 61.9 1.1E+02 0.0024 26.7 14.5 113 262-378 22-146 (248)
435 COG4590 ABC-type uncharacteriz 60.8 1.1E+02 0.0024 29.1 10.0 107 273-381 280-388 (733)
436 PHA03098 kelch-like protein; P 60.5 1.6E+02 0.0035 28.9 12.3 60 318-379 437-511 (534)
437 TIGR02608 delta_60_rpt delta-6 60.3 27 0.00059 22.3 4.4 17 352-368 3-19 (55)
438 PRK13684 Ycf48-like protein; P 60.0 1.4E+02 0.003 27.3 11.6 105 263-373 174-282 (334)
439 KOG2247 WD40 repeat-containing 59.2 2.2 4.8E-05 40.1 -0.9 131 233-372 49-181 (615)
440 PF14761 HPS3_N: Hermansky-Pud 58.0 48 0.001 28.0 6.7 46 321-367 30-77 (215)
441 PF03088 Str_synth: Strictosid 57.0 37 0.0008 24.2 5.2 43 325-368 33-76 (89)
442 KOG1916 Nuclear protein, conta 56.6 17 0.00036 37.3 4.4 22 315-336 243-264 (1283)
443 COG4880 Secreted protein conta 56.1 52 0.0011 30.8 7.1 77 307-383 427-507 (603)
444 KOG3616 Selective LIM binding 55.6 30 0.00066 34.8 5.9 64 310-376 17-80 (1636)
445 PF07995 GSDH: Glucose / Sorbo 55.6 52 0.0011 30.1 7.3 57 318-374 270-330 (331)
446 KOG4460 Nuclear pore complex, 53.7 1.4E+02 0.0031 29.0 9.7 80 264-343 106-204 (741)
447 PF12341 DUF3639: Protein of u 50.5 39 0.00084 18.0 3.6 26 350-377 2-27 (27)
448 PF05096 Glu_cyclase_2: Glutam 50.2 1.8E+02 0.0039 25.6 20.9 165 181-367 68-249 (264)
449 PF13570 PQQ_3: PQQ-like domai 47.0 37 0.00079 19.6 3.3 20 319-338 21-40 (40)
450 TIGR03118 PEPCTERM_chp_1 conse 46.6 1.7E+02 0.0038 26.3 8.6 69 310-378 25-117 (336)
451 PF01731 Arylesterase: Arylest 46.1 1.1E+02 0.0023 21.8 6.5 29 351-379 55-84 (86)
452 TIGR03074 PQQ_membr_DH membran 45.7 3.7E+02 0.008 28.0 12.8 28 319-346 260-287 (764)
453 PRK13684 Ycf48-like protein; P 45.5 1.4E+02 0.003 27.3 8.5 63 308-373 173-237 (334)
454 COG3823 Glutamine cyclotransfe 45.2 1.9E+02 0.0042 24.5 13.7 50 318-367 185-247 (262)
455 PF01731 Arylesterase: Arylest 43.3 56 0.0012 23.1 4.3 30 309-338 55-85 (86)
456 PRK10115 protease 2; Provision 42.9 3.9E+02 0.0084 27.4 13.2 111 263-379 128-255 (686)
457 PF13449 Phytase-like: Esteras 42.5 2.6E+02 0.0057 25.4 14.2 59 310-369 87-166 (326)
458 PF11635 Med16: Mediator compl 42.0 1.9E+02 0.0042 29.9 9.6 67 308-374 260-345 (753)
459 PF10584 Proteasome_A_N: Prote 40.4 6.6 0.00014 20.0 -0.5 8 356-363 7-14 (23)
460 PF14583 Pectate_lyase22: Olig 39.3 3.3E+02 0.0071 25.5 11.2 94 270-365 44-140 (386)
461 KOG4659 Uncharacterized conser 38.5 2.5E+02 0.0054 30.8 9.5 63 311-373 596-685 (1899)
462 COG3204 Uncharacterized protei 37.5 3.1E+02 0.0066 24.6 11.8 115 261-378 85-209 (316)
463 PF03088 Str_synth: Strictosid 36.6 1.3E+02 0.0029 21.4 5.4 40 280-324 34-73 (89)
464 PF07250 Glyoxal_oxid_N: Glyox 36.6 1.7E+02 0.0037 25.4 7.0 60 311-371 70-139 (243)
465 PHA03098 kelch-like protein; P 35.9 4.3E+02 0.0093 25.9 13.8 22 318-339 389-416 (534)
466 PF08309 LVIVD: LVIVD repeat; 34.1 1E+02 0.0023 18.3 3.9 30 352-383 4-33 (42)
467 PF14779 BBS1: Ciliary BBSome 33.7 3.2E+02 0.0069 24.0 8.2 54 230-286 195-253 (257)
468 COG3490 Uncharacterized protei 33.6 3.5E+02 0.0077 24.2 12.3 54 269-325 121-179 (366)
469 PF12768 Rax2: Cortical protei 33.5 3.5E+02 0.0076 24.1 10.2 80 284-368 17-109 (281)
470 PHA02790 Kelch-like protein; P 33.1 4.6E+02 0.01 25.4 13.3 22 318-339 362-386 (480)
471 TIGR03606 non_repeat_PQQ dehyd 32.5 2.6E+02 0.0057 26.9 8.2 62 13-74 24-90 (454)
472 smart00036 CNH Domain found in 32.3 3E+02 0.0064 24.8 8.3 58 318-378 12-72 (302)
473 KOG3616 Selective LIM binding 31.9 98 0.0021 31.4 5.3 34 18-51 14-47 (1636)
474 COG1770 PtrB Protease II [Amin 31.7 1.7E+02 0.0037 29.4 6.8 59 310-370 131-194 (682)
475 KOG1520 Predicted alkaloid syn 31.6 4.3E+02 0.0093 24.6 11.4 101 263-367 116-236 (376)
476 PF10214 Rrn6: RNA polymerase 31.1 3.9E+02 0.0084 27.8 9.9 73 308-381 146-234 (765)
477 TIGR03075 PQQ_enz_alc_DH PQQ-d 30.7 3.6E+02 0.0078 26.6 9.2 30 318-347 471-500 (527)
478 KOG2280 Vacuolar assembly/sort 28.4 1.6E+02 0.0035 29.9 6.2 50 328-379 63-112 (829)
479 COG1520 FOG: WD40-like repeat 28.2 4.8E+02 0.01 24.0 10.3 31 318-349 111-141 (370)
480 TIGR03547 muta_rot_YjhT mutatr 27.5 4.7E+02 0.01 23.7 13.3 53 317-371 256-332 (346)
481 TIGR02171 Fb_sc_TIGR02171 Fibr 27.2 2E+02 0.0042 30.2 6.7 50 329-378 329-384 (912)
482 TIGR03075 PQQ_enz_alc_DH PQQ-d 27.1 6.2E+02 0.013 25.0 11.1 26 321-346 122-147 (527)
483 PF02333 Phytase: Phytase; In 27.0 5.3E+02 0.012 24.2 16.6 164 173-342 116-295 (381)
484 PF13449 Phytase-like: Esteras 26.5 4.9E+02 0.011 23.6 13.5 72 308-379 147-249 (326)
485 KOG1897 Damage-specific DNA bi 25.7 8.4E+02 0.018 26.1 16.9 100 235-337 843-942 (1096)
486 KOG1896 mRNA cleavage and poly 25.1 9.4E+02 0.02 26.4 14.0 134 239-379 1064-1213(1366)
487 TIGR03118 PEPCTERM_chp_1 conse 24.6 5.3E+02 0.012 23.4 9.2 51 309-359 245-307 (336)
488 PF14761 HPS3_N: Hermansky-Pud 24.4 4.4E+02 0.0096 22.4 15.2 46 233-279 31-77 (215)
489 PF09826 Beta_propel: Beta pro 23.8 7.1E+02 0.015 24.5 13.5 78 306-383 324-414 (521)
490 PLN00033 photosystem II stabil 23.1 6.4E+02 0.014 23.8 11.9 66 307-375 280-352 (398)
491 PHA02790 Kelch-like protein; P 21.6 7.4E+02 0.016 24.0 14.2 57 318-379 407-470 (480)
492 COG5167 VID27 Protein involved 21.3 7E+02 0.015 24.5 8.6 99 233-337 530-632 (776)
493 KOG2280 Vacuolar assembly/sort 20.6 9.5E+02 0.021 24.8 12.1 50 240-292 64-113 (829)
No 1
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2e-43 Score=301.93 Aligned_cols=346 Identities=18% Similarity=0.281 Sum_probs=244.3
Q ss_pred CCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
.+....+.||.++|.|++|+|+|+.|+|||.|.++|+||+.+.......+.|. +.+.+++++| ++.+++||+.||+
T Consensus 105 trCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~--~WVlcvawsP--Dgk~iASG~~dg~ 180 (480)
T KOG0271|consen 105 TRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHK--NWVLCVAWSP--DGKKIASGSKDGS 180 (480)
T ss_pred ceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCc--cEEEEEEECC--CcchhhccccCCe
Confidence 33445678999999999999999999999999999999999888888777665 6799999999 5799999999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeee--EEee-ccccccccccCCCC----ccceeccCcccccCccccccccCCccc
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCK--LSLV-KEPYANAKQANEPK----DCYEREVGETVDTDSLCDSKESNRSFE 160 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
|++||..+|+....+. +.+.-.+.. ++.. ..+.-. ..+.+.+ .+|+...+..+ .. ...+...
T Consensus 181 I~lwdpktg~~~g~~l---~gH~K~It~Lawep~hl~p~~r-~las~skDg~vrIWd~~~~~~~-~~-lsgHT~~----- 249 (480)
T KOG0271|consen 181 IRLWDPKTGQQIGRAL---RGHKKWITALAWEPLHLVPPCR-RLASSSKDGSVRIWDTKLGTCV-RT-LSGHTAS----- 249 (480)
T ss_pred EEEecCCCCCcccccc---cCcccceeEEeecccccCCCcc-ceecccCCCCEEEEEccCceEE-EE-eccCccc-----
Confidence 9999999887543221 111111111 1100 000000 0111111 11111111000 00 0111111
Q ss_pred eecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCC-CCcCCCCCceeeEEEeecCCCC------------
Q 016769 161 IIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGS-PNFSSKGRGMCMAVQAYLPSKS------------ 227 (383)
Q Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~------------ 227 (383)
+ .|-.-|..-++.+|+.|++||+|+...+.++..+..+.+... ... +..+.+... +|-+...
T Consensus 250 V--TCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lal-sTdy~LRtg--af~~t~~~~~~~se~~~~A 324 (480)
T KOG0271|consen 250 V--TCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLAL-STDYVLRTG--AFDHTGRKPKSFSEEQKKA 324 (480)
T ss_pred e--EEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeec-cchhhhhcc--ccccccccCCChHHHHHHH
Confidence 1 111112223678899999999999999887777765543321 111 111111111 1111100
Q ss_pred ---------CCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeE
Q 016769 228 ---------QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV 298 (383)
Q Consensus 228 ---------~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~ 298 (383)
+...++++|+.|.++.+|+......++..+.+|..-|+.+.|+|++.++++++.|+.|++||.++. +.+
T Consensus 325 l~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tG--k~l 402 (480)
T KOG0271|consen 325 LERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTG--KFL 402 (480)
T ss_pred HHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCc--chh
Confidence 011369999999999999987777788899999999999999999999999999999999987643 332
Q ss_pred EeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 299 IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 299 ~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
..+..|...|..++++.|.+.+++++.|.++++||+++.+...-+.||...|.++.|+|||+.+++|+.|..+++|.
T Consensus 403 --asfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 403 --ASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred --hhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 23455667899999999999999999999999999999999889999999999999999999999999999999995
No 2
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3e-40 Score=285.87 Aligned_cols=288 Identities=20% Similarity=0.303 Sum_probs=228.9
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEee
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd 92 (383)
.-.|-+.+|..+.|++|++.|+|||.+|.++||+..+...+..+.+|. ..+.++.|.|...+..++||+.||++++|+
T Consensus 170 SQ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~--~~v~~~~fhP~~~~~~lat~s~Dgtvklw~ 247 (459)
T KOG0272|consen 170 SQVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHT--SRVGAAVFHPVDSDLNLATASADGTVKLWK 247 (459)
T ss_pred hhccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccc--cceeeEEEccCCCccceeeeccCCceeeec
Confidence 334678999999999999999999999999999999887777777775 457788899853356899999999999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
+++... ...+.. |... ..-..+.|.| ++
T Consensus 248 ~~~e~~----l~~l~g---H~~R--------------------------------------------Vs~VafHPsG-~~ 275 (459)
T KOG0272|consen 248 LSQETP----LQDLEG---HLAR--------------------------------------------VSRVAFHPSG-KF 275 (459)
T ss_pred cCCCcc----hhhhhc---chhh--------------------------------------------heeeeecCCC-ce
Confidence 976421 111110 1000 0011233444 45
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
| .+++.|.+-|+||++++..+.....++ ..+++++ |.++. ..+++|+-|..-+|||+|++.
T Consensus 276 L-~TasfD~tWRlWD~~tk~ElL~QEGHs----------~~v~~ia---f~~DG----SL~~tGGlD~~~RvWDlRtgr- 336 (459)
T KOG0272|consen 276 L-GTASFDSTWRLWDLETKSELLLQEGHS----------KGVFSIA---FQPDG----SLAATGGLDSLGRVWDLRTGR- 336 (459)
T ss_pred e-eecccccchhhcccccchhhHhhcccc----------cccceeE---ecCCC----ceeeccCccchhheeecccCc-
Confidence 4 456778999999999988665444322 1222332 44443 357889999999999999954
Q ss_pred ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC-CCcEEEEEeCCCcE
Q 016769 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP-DSKIAATAGWDRRV 331 (383)
Q Consensus 253 ~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p-~~~~l~s~~~dg~i 331 (383)
.+-.+.+|..+|..+.|+|.|-.+++||.|++++||||+.... ...+..|.+-|+.+.|+| .|.+|++++.|+++
T Consensus 337 ~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~----ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~ 412 (459)
T KOG0272|consen 337 CIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSE----LYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTV 412 (459)
T ss_pred EEEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccccc----ceecccccchhhheEecccCCeEEEEcccCcce
Confidence 4678899999999999999999999999999999999986543 345667888899999999 67899999999999
Q ss_pred EEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 332 RIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 332 ~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
+||..++..+++++.||+..|.+++++||+..++|+|.|.++|+|.
T Consensus 413 kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 413 KIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred eeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 9999999999999999999999999999999999999999999996
No 3
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=3.9e-38 Score=261.00 Aligned_cols=295 Identities=19% Similarity=0.282 Sum_probs=230.3
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
...+|+||...|+++.|++|.++|+|+|.||.+.|||..+..+++.+.. +...+...+++|+ ++.++.||.|+...
T Consensus 47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl--~s~WVMtCA~sPS--g~~VAcGGLdN~Cs 122 (343)
T KOG0286|consen 47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPL--PSSWVMTCAYSPS--GNFVACGGLDNKCS 122 (343)
T ss_pred eEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEec--CceeEEEEEECCC--CCeEEecCcCceeE
Confidence 3468999999999999999999999999999999999988777665432 3467889999996 68889999999999
Q ss_pred EeecCCCCCCCCCeeeee-cCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc-CC
Q 016769 90 CWDIENGGLSSNPSLTIK-TNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV-PA 167 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 167 (383)
|+++.+...... ..+. ....| ...+..| +.
T Consensus 123 iy~ls~~d~~g~--~~v~r~l~gH----------------------------------------------tgylScC~f~ 154 (343)
T KOG0286|consen 123 IYPLSTRDAEGN--VRVSRELAGH----------------------------------------------TGYLSCCRFL 154 (343)
T ss_pred EEeccccccccc--ceeeeeecCc----------------------------------------------cceeEEEEEc
Confidence 999975421110 0000 00000 0000000 11
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
+... ++.++.|.+.-+||+++++++..+.. +.+.++.++ +.|++ .+.+++|+-|++.+|||+
T Consensus 155 dD~~--ilT~SGD~TCalWDie~g~~~~~f~G----------H~gDV~sls---l~p~~---~ntFvSg~cD~~aklWD~ 216 (343)
T KOG0286|consen 155 DDNH--ILTGSGDMTCALWDIETGQQTQVFHG----------HTGDVMSLS---LSPSD---GNTFVSGGCDKSAKLWDV 216 (343)
T ss_pred CCCc--eEecCCCceEEEEEcccceEEEEecC----------CcccEEEEe---cCCCC---CCeEEecccccceeeeec
Confidence 2222 34456678999999999998887763 223344433 44432 335789999999999999
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW 327 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~ 327 (383)
|.+ ...+.+.+|...|+.+.|.|++..+++|+.|+++++|||+....... ........+|++++|+..|++|.+|..
T Consensus 217 R~~-~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~--ys~~~~~~gitSv~FS~SGRlLfagy~ 293 (343)
T KOG0286|consen 217 RSG-QCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAV--YSHDSIICGITSVAFSKSGRLLFAGYD 293 (343)
T ss_pred cCc-ceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEee--eccCcccCCceeEEEcccccEEEeeec
Confidence 985 56788999999999999999999999999999999999986543333 233334467999999999999999999
Q ss_pred CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
|.++.+||.-+++.+..+.+|++.|.++..+|||-.|+|||.|.++|||.
T Consensus 294 d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 294 DFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 99999999999999999999999999999999999999999999999995
No 4
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=6.3e-36 Score=248.80 Aligned_cols=294 Identities=21% Similarity=0.319 Sum_probs=219.9
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccc-ccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT-VSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
.|...+.||++.|+.+.|+|+|..|||||.|..|.+|++..... ...+..|. ..+..+.+.. +++.++|+|.|.+
T Consensus 38 ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHs--gAVM~l~~~~--d~s~i~S~gtDk~ 113 (338)
T KOG0265|consen 38 APIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHS--GAVMELHGMR--DGSHILSCGTDKT 113 (338)
T ss_pred chhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeecccc--ceeEeeeecc--CCCEEEEecCCce
Confidence 46778899999999999999999999999999999999765432 23344444 3356666665 5789999999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
++.||+++|++.++ +..|..... +.....
T Consensus 114 v~~wD~~tG~~~rk-------~k~h~~~vN--------------------------------------------s~~p~r 142 (338)
T KOG0265|consen 114 VRGWDAETGKRIRK-------HKGHTSFVN--------------------------------------------SLDPSR 142 (338)
T ss_pred EEEEecccceeeeh-------hccccceee--------------------------------------------ecCccc
Confidence 99999999865332 111110000 000001
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
-| ..++.+|++|+++|+||+++...+.+++... ...++ .|. +....+++|+-|+.|++||+
T Consensus 143 rg-~~lv~SgsdD~t~kl~D~R~k~~~~t~~~ky-------------qltAv-~f~----d~s~qv~sggIdn~ikvWd~ 203 (338)
T KOG0265|consen 143 RG-PQLVCSGSDDGTLKLWDIRKKEAIKTFENKY-------------QLTAV-GFK----DTSDQVISGGIDNDIKVWDL 203 (338)
T ss_pred cC-CeEEEecCCCceEEEEeecccchhhccccce-------------eEEEE-Eec----ccccceeeccccCceeeecc
Confidence 12 3577889999999999999877665553210 11121 121 11235889999999999999
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCe--eEEeeeeecCC--CCeEEEEECCCCcEEE
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGS--CVIKKEINLER--PGISGTSIRPDSKIAA 323 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~--~~~~~~~~~~~--~~i~~~~~~p~~~~l~ 323 (383)
+... .+..+.+|.++|..+...+.+..+++-+-|+++++||++..... +.....-..+. ...-..+++|++.++.
T Consensus 204 r~~d-~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ 282 (338)
T KOG0265|consen 204 RKND-GLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKIT 282 (338)
T ss_pred ccCc-ceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccc
Confidence 8744 47789999999999999999999999999999999999864322 22222211122 2234678899999999
Q ss_pred EEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 324 TAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 324 s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
+|+.|+.+++||....+.++.+.||..-|++++|+|...+|.+++.|.+|.+=.
T Consensus 283 ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 283 AGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred cccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence 999999999999999899999999999999999999999999999999998743
No 5
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=4.1e-33 Score=226.39 Aligned_cols=276 Identities=19% Similarity=0.313 Sum_probs=197.8
Q ss_pred CeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCc
Q 016769 31 PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS 110 (383)
Q Consensus 31 ~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~ 110 (383)
-+|+|+|-|.+||+|++.+++|...+. |.. ..+-.+.+.|+ ...|++++ ...||++|+.++.. .|..++..+.
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiq-h~d-sqVNrLeiTpd--k~~LAaa~-~qhvRlyD~~S~np--~Pv~t~e~h~ 83 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQ-HPD-SQVNRLEITPD--KKDLAAAG-NQHVRLYDLNSNNP--NPVATFEGHT 83 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEe-cCc-cceeeEEEcCC--cchhhhcc-CCeeEEEEccCCCC--CceeEEeccC
Confidence 379999999999999999999988764 322 34666777773 34455554 47899999987631 1221111000
Q ss_pred eeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCC
Q 016769 111 YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNT 190 (383)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~ 190 (383)
++.. ...+..+| ++ ..+|+.||++||||++.
T Consensus 84 ---------kNVt--------------------------------------aVgF~~dg-rW-MyTgseDgt~kIWdlR~ 114 (311)
T KOG0315|consen 84 ---------KNVT--------------------------------------AVGFQCDG-RW-MYTGSEDGTVKIWDLRS 114 (311)
T ss_pred ---------CceE--------------------------------------EEEEeecC-eE-EEecCCCceEEEEeccC
Confidence 0000 00111233 34 45677899999999999
Q ss_pred CCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEe
Q 016769 191 AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSID 270 (383)
Q Consensus 191 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~ 270 (383)
..+..-+..+ ..+.+.. +.| ++ ..+++|.++|.|++||++........+.....+|.++.++
T Consensus 115 ~~~qR~~~~~-----------spVn~vv---lhp--nQ--teLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~ 176 (311)
T KOG0315|consen 115 LSCQRNYQHN-----------SPVNTVV---LHP--NQ--TELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVM 176 (311)
T ss_pred cccchhccCC-----------CCcceEE---ecC--Cc--ceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEc
Confidence 5543333221 1122211 222 22 3699999999999999987544444445556789999999
Q ss_pred CCCCceEEEEcCCcEEEEEccCCCCeeEEeee--eecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCC-ceEEEecc
Q 016769 271 ESCNGGISGGADQKIVLYNLDHSTGSCVIKKE--INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG-SALAILKY 347 (383)
Q Consensus 271 ~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~--~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~ 347 (383)
+++..++.+...|+..+|++-..+....+... +..+...+..+.||||++|||++|.|++++||+.+.. +....+.+
T Consensus 177 ~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~g 256 (311)
T KOG0315|consen 177 PDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTG 256 (311)
T ss_pred CCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeec
Confidence 99999999999999999998654433333221 3456677899999999999999999999999999887 55678899
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 348 HHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 348 h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
|++.++..+||.||+||++||.|+.+++|++.-
T Consensus 257 h~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~ 289 (311)
T KOG0315|consen 257 HQRWVWDCAFSADGEYLVTASSDHTARLWDLSA 289 (311)
T ss_pred CCceEEeeeeccCccEEEecCCCCceeeccccc
Confidence 999999999999999999999999999999853
No 6
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-32 Score=226.96 Aligned_cols=292 Identities=18% Similarity=0.304 Sum_probs=210.8
Q ss_pred CeeeeeecCCceeeEEEeCC-CCeEEEecCCCeEEEeeCccc-----ccccccccccccceeeeeeecCCCCcceeEecc
Q 016769 10 PVAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQH-----RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~-~~~L~sgs~D~~v~vW~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 83 (383)
...+|+||++.|++++..+. ...|++++.|.++.+|++... ..+..+.+|+ |.+..+..++ ++++++|++
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHs--H~v~dv~~s~--dg~~alS~s 82 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHS--HFVSDVVLSS--DGNFALSAS 82 (315)
T ss_pred eeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccc--eEecceEEcc--CCceEEecc
Confidence 44689999999999999886 568999999999999997543 2334444444 5677777776 578999999
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
+|+++|+||+++++... . +.-++.. ....
T Consensus 83 wD~~lrlWDl~~g~~t~----~----------f~GH~~d-------------------------------------Vlsv 111 (315)
T KOG0279|consen 83 WDGTLRLWDLATGESTR----R----------FVGHTKD-------------------------------------VLSV 111 (315)
T ss_pred ccceEEEEEecCCcEEE----E----------EEecCCc-------------------------------------eEEE
Confidence 99999999999874211 1 0000000 0011
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
+++++.. -+++|+.|++|++|+.-...... +..+. ...- .....|.|+..+ ..++++++|++||
T Consensus 112 a~s~dn~--qivSGSrDkTiklwnt~g~ck~t-~~~~~--------~~~W---VscvrfsP~~~~--p~Ivs~s~DktvK 175 (315)
T KOG0279|consen 112 AFSTDNR--QIVSGSRDKTIKLWNTLGVCKYT-IHEDS--------HREW---VSCVRFSPNESN--PIIVSASWDKTVK 175 (315)
T ss_pred EecCCCc--eeecCCCcceeeeeeecccEEEE-EecCC--------CcCc---EEEEEEcCCCCC--cEEEEccCCceEE
Confidence 2334443 35788999999999987655433 32211 0111 222347776433 3588999999999
Q ss_pred EEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEE
Q 016769 244 VWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAA 323 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~ 323 (383)
+||+++.. ....+.+|+..++.++++|+|..+++|+.||.+.+||++... ++... .+...|++++|+|+. |.+
T Consensus 176 vWnl~~~~-l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k--~lysl---~a~~~v~sl~fspnr-ywL 248 (315)
T KOG0279|consen 176 VWNLRNCQ-LRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGK--NLYSL---EAFDIVNSLCFSPNR-YWL 248 (315)
T ss_pred EEccCCcc-hhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCc--eeEec---cCCCeEeeEEecCCc-eeE
Confidence 99998743 345677899999999999999999999999999999998643 32222 233569999999986 555
Q ss_pred EEeCCCcEEEEEcCCCceEEEec----c-----cccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 324 TAGWDRRVRIYNYRKGSALAILK----Y-----HHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 324 s~~~dg~i~iwd~~~~~~~~~~~----~-----h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++..+..|+|||+++++.+..++ + -.-.+.+++||+||..|.+|-.|+.|++|.+.
T Consensus 249 ~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 249 CAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred eeccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 56667779999999987765443 1 13346788999999999999999999999874
No 7
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.6e-33 Score=238.68 Aligned_cols=293 Identities=20% Similarity=0.324 Sum_probs=227.5
Q ss_pred CCCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccC
Q 016769 6 PPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 6 ~~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
|+|..++.+.||+.+|+.+-|+|+....+++++|.+|++||..+++++..+.+|..+ +..+.+... +..+++++.|
T Consensus 96 pRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~s--v~di~~~a~--Gk~l~tcSsD 171 (406)
T KOG0295|consen 96 PRPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDS--VFDISFDAS--GKYLATCSSD 171 (406)
T ss_pred CCCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccc--eeEEEEecC--ccEEEecCCc
Confidence 556677889999999999999999999999999999999999999998888888643 777888763 6889999999
Q ss_pred CeEEEeecCCC-CCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 86 GTVKCWDIENG-GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 86 ~ti~~Wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
-++++||.++. ++.+ ....| . ..+ ..+.
T Consensus 172 l~~~LWd~~~~~~c~k-------s~~gh----------~---------h~v---------------------S~V~---- 200 (406)
T KOG0295|consen 172 LSAKLWDFDTFFRCIK-------SLIGH----------E---------HGV---------------------SSVF---- 200 (406)
T ss_pred cchhheeHHHHHHHHH-------HhcCc----------c---------cce---------------------eeEE----
Confidence 99999998652 1110 00000 0 000 0000
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
+-+.| . .+++.+.|++|+.||+.++.++.+++.+.. .+.+. . +. ++...+++|+.|.+|++
T Consensus 201 f~P~g-d-~ilS~srD~tik~We~~tg~cv~t~~~h~e-----------wvr~v-~---v~--~DGti~As~s~dqtl~v 261 (406)
T KOG0295|consen 201 FLPLG-D-HILSCSRDNTIKAWECDTGYCVKTFPGHSE-----------WVRMV-R---VN--QDGTIIASCSNDQTLRV 261 (406)
T ss_pred EEecC-C-eeeecccccceeEEecccceeEEeccCchH-----------hEEEE-E---ec--CCeeEEEecCCCceEEE
Confidence 01122 2 345567789999999999999988875321 22211 1 11 23335678999999999
Q ss_pred EeCCCCCCceeeeeccccCeEEEEEeCC---------------CCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 245 WDIRNPGIPLTAMKVHLEPVLCLSIDES---------------CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 245 wdl~~~~~~~~~~~~h~~~v~~~~~~~~---------------~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
|=+.+ +.+...+..|..+|.|++|.+. +..+.+++.|++|++||+. ++.+++ ++..+.+.
T Consensus 262 W~~~t-~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~--tg~cL~--tL~ghdnw 336 (406)
T KOG0295|consen 262 WVVAT-KQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVS--TGMCLF--TLVGHDNW 336 (406)
T ss_pred EEecc-chhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEecc--CCeEEE--EEecccce
Confidence 99877 3345667789999999988332 2367889999999999986 445554 56778899
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
|.+++|+|.|+||++...|+++++||+..+++++++..|+.-|.+++|+-+..+++|||-|.++++|.
T Consensus 337 Vr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 337 VRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred eeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 99999999999999999999999999999999999999999999999998888999999999999996
No 8
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.6e-33 Score=239.22 Aligned_cols=293 Identities=22% Similarity=0.330 Sum_probs=196.4
Q ss_pred cccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeecccccccccc--
Q 016769 52 TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQA-- 129 (383)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 129 (383)
|-..+.+|. +.++++.|+| ++..|+||+.|.|+|+||+.+. +|.++.+.+. + ....+...|...-...
T Consensus 107 CssS~~GH~--e~Vl~~~fsp--~g~~l~tGsGD~TvR~WD~~Te----Tp~~t~KgH~-~-WVlcvawsPDgk~iASG~ 176 (480)
T KOG0271|consen 107 CSSSIAGHG--EAVLSVQFSP--TGSRLVTGSGDTTVRLWDLDTE----TPLFTCKGHK-N-WVLCVAWSPDGKKIASGS 176 (480)
T ss_pred eccccCCCC--CcEEEEEecC--CCceEEecCCCceEEeeccCCC----CcceeecCCc-c-EEEEEEECCCcchhhccc
Confidence 333444443 5689999999 5789999999999999999764 4455544432 1 1222222222211111
Q ss_pred -CCCCccceeccCcccccCcccccccc-CCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCC
Q 016769 130 -NEPKDCYEREVGETVDTDSLCDSKES-NRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPN 207 (383)
Q Consensus 130 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~ 207 (383)
.+...+|+-..|+.......++.+-. ..++.... ..++. + ++++++.||.++|||+.-+.++..+..+
T Consensus 177 ~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~h-l~p~~-r-~las~skDg~vrIWd~~~~~~~~~lsgH------- 246 (480)
T KOG0271|consen 177 KDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLH-LVPPC-R-RLASSSKDGSVRIWDTKLGTCVRTLSGH------- 246 (480)
T ss_pred cCCeEEEecCCCCCcccccccCcccceeEEeecccc-cCCCc-c-ceecccCCCCEEEEEccCceEEEEeccC-------
Confidence 11112222222222222222221110 00111111 11233 3 4567788999999999888877666432
Q ss_pred cCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEe-----------CCCCc-
Q 016769 208 FSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSID-----------ESCNG- 275 (383)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~-----------~~~~~- 275 (383)
.+++..... .+...+.+|+.|++|++|+... +..+..+++|...|+.++.+ +.++.
T Consensus 247 --------T~~VTCvrw---GG~gliySgS~DrtIkvw~a~d-G~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~ 314 (480)
T KOG0271|consen 247 --------TASVTCVRW---GGEGLIYSGSQDRTIKVWRALD-GKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKP 314 (480)
T ss_pred --------ccceEEEEE---cCCceEEecCCCceEEEEEccc-hhHHHhhcccchheeeeeccchhhhhccccccccccC
Confidence 112222211 2334688999999999999876 55678899999999888764 33333
Q ss_pred ------------------------eEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcE
Q 016769 276 ------------------------GISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRV 331 (383)
Q Consensus 276 ------------------------~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i 331 (383)
+++|+.|.++.+|+-.... ++ ...+..|+.-|+.+.|+||++|||+++.|+.|
T Consensus 315 ~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~k-kp--i~rmtgHq~lVn~V~fSPd~r~IASaSFDkSV 391 (480)
T KOG0271|consen 315 KSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSK-KP--ITRMTGHQALVNHVSFSPDGRYIASASFDKSV 391 (480)
T ss_pred CChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccc-cc--hhhhhchhhheeeEEECCCccEEEEeecccce
Confidence 8999999999999754221 11 12355677889999999999999999999999
Q ss_pred EEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 332 RIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 332 ~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++||.++|+.+.+++||...|..++||.|.++|+|||.|.++++|++.
T Consensus 392 kLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~ 439 (480)
T KOG0271|consen 392 KLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVR 439 (480)
T ss_pred eeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEee
Confidence 999999999999999999999999999999999999999999999874
No 9
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=4.2e-34 Score=247.77 Aligned_cols=251 Identities=22% Similarity=0.321 Sum_probs=197.2
Q ss_pred CCCCCeeeeeecCCceeeEEEeCC--CCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecc
Q 016769 6 PPPDPVAVLRGHRASVTDVCFHQT--KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (383)
Q Consensus 6 ~~~~~~~~l~gH~~~V~~v~f~~~--~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 83 (383)
|..+.+++|+||++.|.++.|+|. +..||||+.||++++|++.+...+..+.+|. ..+..++|.|+ |..|+|++
T Consensus 205 ~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~--~RVs~VafHPs--G~~L~Tas 280 (459)
T KOG0272|consen 205 PQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHL--ARVSRVAFHPS--GKFLGTAS 280 (459)
T ss_pred CCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcch--hhheeeeecCC--Cceeeecc
Confidence 455778999999999999999997 5589999999999999999888888887776 56888999995 78999999
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.|.|-|+||++++..+- ..+.+ ...++ ..
T Consensus 281 fD~tWRlWD~~tk~ElL----~QEGH----------------------s~~v~-------------------------~i 309 (459)
T KOG0272|consen 281 FDSTWRLWDLETKSELL----LQEGH----------------------SKGVF-------------------------SI 309 (459)
T ss_pred cccchhhcccccchhhH----hhccc----------------------ccccc-------------------------ee
Confidence 99999999998763210 00000 00000 01
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
++.++|. ++++|+.|..-||||++++.+++.+..+. ..++.+ .|.|+ + ..+++|+.|++++
T Consensus 310 af~~DGS--L~~tGGlD~~~RvWDlRtgr~im~L~gH~----------k~I~~V---~fsPN---G-y~lATgs~Dnt~k 370 (459)
T KOG0272|consen 310 AFQPDGS--LAATGGLDSLGRVWDLRTGRCIMFLAGHI----------KEILSV---AFSPN---G-YHLATGSSDNTCK 370 (459)
T ss_pred EecCCCc--eeeccCccchhheeecccCcEEEEecccc----------cceeeE---eECCC---c-eEEeecCCCCcEE
Confidence 2334443 78889999999999999999999887532 122222 35543 2 3689999999999
Q ss_pred EEeCCCCCCceeeeeccccCeEEEEEeC-CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEE
Q 016769 244 VWDIRNPGIPLTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 322 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l 322 (383)
|||++.. ..+..+.+|..-|..+.|+| .+..+++++.|+++++|.-.. ..+ .+.+-.|.+.|.+++++||++++
T Consensus 371 VWDLR~r-~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~--~~~--~ksLaGHe~kV~s~Dis~d~~~i 445 (459)
T KOG0272|consen 371 VWDLRMR-SELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRT--WSP--LKSLAGHEGKVISLDISPDSQAI 445 (459)
T ss_pred Eeeeccc-ccceecccccchhhheEecccCCeEEEEcccCcceeeecCCC--ccc--chhhcCCccceEEEEeccCCceE
Confidence 9999984 44788999999999999997 667789999999999996543 222 34566788999999999999999
Q ss_pred EEEeCCCcEEEEE
Q 016769 323 ATAGWDRRVRIYN 335 (383)
Q Consensus 323 ~s~~~dg~i~iwd 335 (383)
++++.|++|++|.
T Consensus 446 ~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 446 ATSSFDRTIKLWR 458 (459)
T ss_pred EEeccCceeeecc
Confidence 9999999999995
No 10
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=100.00 E-value=5.6e-33 Score=227.36 Aligned_cols=314 Identities=40% Similarity=0.670 Sum_probs=223.4
Q ss_pred CCCCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEeccc
Q 016769 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (383)
Q Consensus 5 ~~~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (383)
|+||.|.++|++|.+.|++++|-.+++ |++|..-|.|++|.+.+.+....+..+. ...+..+-..| +..|.+.+.
T Consensus 1 ~~pPdP~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g-~~~it~lq~~p---~d~l~tqgR 75 (323)
T KOG0322|consen 1 MVPPDPFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFG-RLFITNLQSIP---NDSLDTQGR 75 (323)
T ss_pred CCCCCCeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhc-cceeeceeecC---CcchhhcCC
Confidence 579999999999999999999988775 9999999999999998776554443221 12344454444 368899999
Q ss_pred CCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
|.++.+|++.-+.... ...+..++.+||.+++++.+....... ..+..+.
T Consensus 76 d~~L~lw~ia~s~~i~--i~Si~~nslgFCrfSl~~~~k~~eqll-------------------~yp~rgs--------- 125 (323)
T KOG0322|consen 76 DPLLILWTIAYSAFIS--IHSIVVNSLGFCRFSLVKKPKNSEQLL-------------------EYPSRGS--------- 125 (323)
T ss_pred CceEEEEEccCcceEE--EeeeeccccccccceeccCCCcchhhe-------------------ecCCccc---------
Confidence 9999999997653221 123344567889888876553221000 0000000
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
+ .+.+=|.....++. +..+ ......+.+||.... ..-.....+++|+++|.|.+
T Consensus 126 --------------d--e~h~~D~g~~tqv~-i~dd-----~~~~Klgsvmc~~~~----~~c~s~~lllaGyEsghvv~ 179 (323)
T KOG0322|consen 126 --------------D--ETHKQDGGDTTQVQ-IADD-----SERSKLGSVMCQDKD----HACGSTFLLLAGYESGHVVI 179 (323)
T ss_pred --------------c--hhhhhccCccceeE-ccCc-----hhccccCceeeeecc----ccccceEEEEEeccCCeEEE
Confidence 0 00000000000000 0000 001111223332211 00111235788999999999
Q ss_pred EeCCCCCCc---------eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEE
Q 016769 245 WDIRNPGIP---------LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSI 315 (383)
Q Consensus 245 wdl~~~~~~---------~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~ 315 (383)
||+.++... ......|.++|.++.+++.....++|+.+..+..|+++..++...+..+.+....+++.+.+
T Consensus 180 wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrI 259 (323)
T KOG0322|consen 180 WDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRI 259 (323)
T ss_pred EEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEE
Confidence 999874221 22345689999999999988888999999999999999888887777777777788999999
Q ss_pred CCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 316 RPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 316 ~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.||++.+|+++||++||+|+.++.+++..++.|...|++++|+||...+|++|.|+.|.+|++|
T Consensus 260 RpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkLY 323 (323)
T KOG0322|consen 260 RPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKLY 323 (323)
T ss_pred ccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeecC
Confidence 9999999999999999999999999999999999999999999999999999999999999986
No 11
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=2.6e-33 Score=246.76 Aligned_cols=295 Identities=16% Similarity=0.326 Sum_probs=215.5
Q ss_pred CCCCeeeeeecCCceeeEEEeC-CCCeEEEecCCCeEEEeeCcc-cccccccccccccceeeeeeecCCCCcceeEeccc
Q 016769 7 PPDPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQ-HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (383)
Q Consensus 7 ~~~~~~~l~gH~~~V~~v~f~~-~~~~L~sgs~D~~v~vW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (383)
|.+.+.++.||+..|+++.|.| .+.+|+|+|.|+.|+|||+-. ++++....+|. ..+..+.|+. .+..|+|+|.
T Consensus 203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~--k~Vrd~~~s~--~g~~fLS~sf 278 (503)
T KOG0282|consen 203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHR--KPVRDASFNN--CGTSFLSASF 278 (503)
T ss_pred cHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcch--hhhhhhhccc--cCCeeeeeec
Confidence 5567789999999999999999 889999999999999999976 66777766665 3467778877 4789999999
Q ss_pred CCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
|+++++||.|+|.+.. .++....-.| ..
T Consensus 279 D~~lKlwDtETG~~~~----~f~~~~~~~c------------------------------------------------vk 306 (503)
T KOG0282|consen 279 DRFLKLWDTETGQVLS----RFHLDKVPTC------------------------------------------------VK 306 (503)
T ss_pred ceeeeeeccccceEEE----EEecCCCcee------------------------------------------------ee
Confidence 9999999999986421 1111000000 11
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
+.++++..+ .+|..++.|+.||+++++.+....++. +.++. ..|.+.+ .+.++.++|++++|
T Consensus 307 f~pd~~n~f-l~G~sd~ki~~wDiRs~kvvqeYd~hL----------g~i~~---i~F~~~g----~rFissSDdks~ri 368 (503)
T KOG0282|consen 307 FHPDNQNIF-LVGGSDKKIRQWDIRSGKVVQEYDRHL----------GAILD---ITFVDEG----RRFISSSDDKSVRI 368 (503)
T ss_pred cCCCCCcEE-EEecCCCcEEEEeccchHHHHHHHhhh----------hheee---eEEccCC----ceEeeeccCccEEE
Confidence 223443434 456668999999999998654433211 11111 1344432 36889999999999
Q ss_pred EeCCCCCCceeeee-ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecC--CCCeEEEEECCCCcE
Q 016769 245 WDIRNPGIPLTAMK-VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE--RPGISGTSIRPDSKI 321 (383)
Q Consensus 245 wdl~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~--~~~i~~~~~~p~~~~ 321 (383)
|+.+.+. ++..+. .+.....++...|.+..++.-+-|+.|.++.+...-.... ++..+.+ .+.-..+.|||||++
T Consensus 369 We~~~~v-~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nk-kK~feGh~vaGys~~v~fSpDG~~ 446 (503)
T KOG0282|consen 369 WENRIPV-PIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNK-KKRFEGHSVAGYSCQVDFSPDGRT 446 (503)
T ss_pred EEcCCCc-cchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCH-hhhhcceeccCceeeEEEcCCCCe
Confidence 9987643 232221 1223455788899999888889999999998654321111 1112222 234567889999999
Q ss_pred EEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEe
Q 016769 322 AATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWE 377 (383)
Q Consensus 322 l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~ 377 (383)
|++|..||++.+||..+.+.+..+++|..+|..+.|+|-.. .+||++.||.|++|+
T Consensus 447 l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 447 LCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred EEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 99999999999999999999999999999999999999654 899999999999996
No 12
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.7e-32 Score=234.43 Aligned_cols=302 Identities=20% Similarity=0.231 Sum_probs=212.4
Q ss_pred CCCCCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccc---ccccccccccceeeeeeecCCCCcceeE
Q 016769 4 RPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVATGPSIGLNKVI 80 (383)
Q Consensus 4 ~~~~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (383)
..-|.+..++|..|+++|+.+.||++|++|||+|.|.+..+|++..... ...+.+|. ..+..+.++| ++++|+
T Consensus 210 ~qip~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~--~~V~yi~wSP--DdryLl 285 (519)
T KOG0293|consen 210 LQIPSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHS--QPVSYIMWSP--DDRYLL 285 (519)
T ss_pred ccCCchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeeccc--CceEEEEECC--CCCeEE
Confidence 3457777889999999999999999999999999999999999866544 33333333 4688899999 579999
Q ss_pred ecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccc
Q 016769 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFE 160 (383)
Q Consensus 81 s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
+||.|..+++||+.+|+..... ... + ..+ .
T Consensus 286 aCg~~e~~~lwDv~tgd~~~~y-----~~~-~----------------~~S----------------------------~ 315 (519)
T KOG0293|consen 286 ACGFDEVLSLWDVDTGDLRHLY-----PSG-L----------------GFS----------------------------V 315 (519)
T ss_pred ecCchHheeeccCCcchhhhhc-----ccC-c----------------CCC----------------------------c
Confidence 9999999999999998643210 000 0 000 0
Q ss_pred eecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC
Q 016769 161 IIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 240 (383)
Q Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg 240 (383)
......++|.+ +++|+.|+++..||++-...-.- + . ....++.++++. + +...+++-..|.
T Consensus 316 ~sc~W~pDg~~--~V~Gs~dr~i~~wdlDgn~~~~W-~------g---vr~~~v~dlait---~----Dgk~vl~v~~d~ 376 (519)
T KOG0293|consen 316 SSCAWCPDGFR--FVTGSPDRTIIMWDLDGNILGNW-E------G---VRDPKVHDLAIT---Y----DGKYVLLVTVDK 376 (519)
T ss_pred ceeEEccCCce--eEecCCCCcEEEecCCcchhhcc-c------c---cccceeEEEEEc---C----CCcEEEEEeccc
Confidence 00112355544 56788899999999865431100 0 0 011233344432 1 123566777899
Q ss_pred cEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEEC-CCC
Q 016769 241 SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR-PDS 319 (383)
Q Consensus 241 ~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~-p~~ 319 (383)
.|++++.+. ...+..+. ...++.+++++.++...++.-.++.+.+||++..- ...+......+.-+-.-+|- .+.
T Consensus 377 ~i~l~~~e~-~~dr~lis-e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~--lv~kY~Ghkq~~fiIrSCFgg~~~ 452 (519)
T KOG0293|consen 377 KIRLYNREA-RVDRGLIS-EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENK--LVRKYFGHKQGHFIIRSCFGGGND 452 (519)
T ss_pred ceeeechhh-hhhhcccc-ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhh--HHHHhhcccccceEEEeccCCCCc
Confidence 999999765 22222232 34689999999999988888899999999997321 11111100011122233343 355
Q ss_pred cEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCCCCC
Q 016769 320 KIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELYPPH 382 (383)
Q Consensus 320 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~~~~ 382 (383)
.++++||.|++|+||+..+++++..+.||.+.|++|+|+|..+ ++||||+||+||||...++.
T Consensus 453 ~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~~ 516 (519)
T KOG0293|consen 453 KFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSDNN 516 (519)
T ss_pred ceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCccc
Confidence 7999999999999999999999999999999999999999776 99999999999999987653
No 13
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.3e-31 Score=246.75 Aligned_cols=191 Identities=19% Similarity=0.302 Sum_probs=148.2
Q ss_pred eeeeccCCcceEEEEecCCCCeee-EeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERCT-RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 250 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~ 250 (383)
.++++++.|+++++|.++++.... .+.+.. .+.. .+-+.+. . ..+...+++++.|.++++|++...
T Consensus 378 ~llat~sKD~svilWr~~~~~~~~~~~a~~~-----gH~~--svgava~---~---~~~asffvsvS~D~tlK~W~l~~s 444 (775)
T KOG0319|consen 378 DLLATGSKDKSVILWRLNNNCSKSLCVAQAN-----GHTN--SVGAVAG---S---KLGASFFVSVSQDCTLKLWDLPKS 444 (775)
T ss_pred cEEEEecCCceEEEEEecCCcchhhhhhhhc-----cccc--ccceeee---c---ccCccEEEEecCCceEEEecCCCc
Confidence 577788899999999995544211 111100 1111 1111211 1 123346889999999999999762
Q ss_pred C---Cce-e----eeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEE
Q 016769 251 G---IPL-T----AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 322 (383)
Q Consensus 251 ~---~~~-~----~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l 322 (383)
. .++ . ....|-..|+++++.|....+++||.|++.++|+++. ..+...+..|.-++.++.|+|+.+.+
T Consensus 445 ~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~----~~l~~vLsGH~RGvw~V~Fs~~dq~l 520 (775)
T KOG0319|consen 445 KETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQ----LRLLGVLSGHTRGVWCVSFSKNDQLL 520 (775)
T ss_pred ccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccC----ceEEEEeeCCccceEEEEecccccee
Confidence 1 111 1 2245888999999999999999999999999999972 23344567788899999999999999
Q ss_pred EEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 323 ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 323 ~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+++|.|+||+||.+.+..+++++.||...|..++|-.+|+.|+|++.||.||+|++.
T Consensus 521 aT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnik 577 (775)
T KOG0319|consen 521 ATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIK 577 (775)
T ss_pred EeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEecc
Confidence 999999999999999999999999999999999999999999999999999999984
No 14
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=2.4e-30 Score=238.88 Aligned_cols=346 Identities=18% Similarity=0.260 Sum_probs=228.0
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccccc--ccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS--SSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
..++.||.+.|.+|.|+.|.++|++||.|.++|||.+..-+.+. .+..|. ..+++..|+. +...+.+.+.||.+
T Consensus 138 ~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHk--d~VvacfF~~--~~~~l~tvskdG~l 213 (893)
T KOG0291|consen 138 HRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHK--DYVVACFFGA--NSLDLYTVSKDGAL 213 (893)
T ss_pred eeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccccceEeccCCC--cceEEEEecc--CcceEEEEecCceE
Confidence 34778999999999999999999999999999999987655432 333343 3467777776 35679999999999
Q ss_pred EEeecCCC--CCCC---------------CCeeeeecCceeee-eEEeecccc--ccccccCC-CCccceeccCcccc--
Q 016769 89 KCWDIENG--GLSS---------------NPSLTIKTNSYHFC-KLSLVKEPY--ANAKQANE-PKDCYEREVGETVD-- 145 (383)
Q Consensus 89 ~~Wd~~~~--~~~~---------------~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~-- 145 (383)
.+|.+... ..-. ......+...+..- ...+.+.+. ..+..... ...+.....|....
T Consensus 214 ~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~Lye 293 (893)
T KOG0291|consen 214 FVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYE 293 (893)
T ss_pred EEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEe
Confidence 99998621 0000 00000000000000 001111100 00000000 00011111121100
Q ss_pred -cCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecC
Q 016769 146 -TDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP 224 (383)
Q Consensus 146 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 224 (383)
.+...-+........+..........+++.+++.-|.+-+|+..+...+.+.+.+. .+ +....++|
T Consensus 294 lP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~----------~~---i~~l~YSp 360 (893)
T KOG0291|consen 294 LPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHS----------DR---ITSLAYSP 360 (893)
T ss_pred cCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccc----------cc---eeeEEECC
Confidence 00000000000000010001111235777777777899999998887766554321 12 22234666
Q ss_pred CCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee
Q 016769 225 SKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN 304 (383)
Q Consensus 225 ~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~ 304 (383)
+. ..+++|++||.|||||..+ +.++.++..|+..|..+.|...++.+++.+-||+|+.||+.....-..+. .
T Consensus 361 Dg----q~iaTG~eDgKVKvWn~~S-gfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft---~ 432 (893)
T KOG0291|consen 361 DG----QLIATGAEDGKVKVWNTQS-GFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFT---S 432 (893)
T ss_pred CC----cEEEeccCCCcEEEEeccC-ceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeec---C
Confidence 53 3688999999999999987 56788999999999999999999999999999999999997554322221 1
Q ss_pred cCCCCeEEEEECCCCcEEEEEeCCC-cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 305 LERPGISGTSIRPDSKIAATAGWDR-RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 305 ~~~~~i~~~~~~p~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
...-...+++..|.|..+.+|+.|. .|++|++.+|+.+..+.||+++|.+++|+|++..|||||.|.+||+||+++-
T Consensus 433 P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 433 PEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred CCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence 2234578999999999998888876 6999999999999999999999999999999999999999999999999753
No 15
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=3.4e-30 Score=229.17 Aligned_cols=343 Identities=18% Similarity=0.225 Sum_probs=222.0
Q ss_pred CCCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccccccccc-ccccceeeeeeecCCCCcceeEeccc
Q 016769 6 PPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HSAAHGIVSVATGPSIGLNKVISQGR 84 (383)
Q Consensus 6 ~~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (383)
||=+...+++.|..-|+|+.|+|||.+++|.|.||.+.+||=.++..+..+.. ..+..++.+++++| ++.+++|+|.
T Consensus 178 PPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsP--Ds~~~~T~Sa 255 (603)
T KOG0318|consen 178 PPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSP--DSTQFLTVSA 255 (603)
T ss_pred CCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECC--CCceEEEecC
Confidence 44455667889999999999999999999999999999999888877766542 12335789999999 5789999999
Q ss_pred CCeEEEeecCCCCCCCCCeeeeec-CceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
|.++|+||+.+..+.++..+.-.. .+.-.|.+. + .........+-...+...... ...... ++.+.+.
T Consensus 256 Dkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--k-d~lItVSl~G~in~ln~~d~~-~~~~i~-------GHnK~IT 324 (603)
T KOG0318|consen 256 DKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--K-DHLITVSLSGTINYLNPSDPS-VLKVIS-------GHNKSIT 324 (603)
T ss_pred CceEEEEEeeccceEEEeecCCchhceEEEEEEe--C-CeEEEEEcCcEEEEecccCCC-hhheec-------cccccee
Confidence 999999999887653321110000 011122221 0 000000000000000000000 000011 1222222
Q ss_pred c--cCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCc
Q 016769 164 D--VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS 241 (383)
Q Consensus 164 ~--~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~ 241 (383)
+ ..+++ ++ +.+|+.||.|.-||+.++..-....+ .+. -.+.+++.. . ...+++.+.|.+
T Consensus 325 aLtv~~d~-~~-i~SgsyDG~I~~W~~~~g~~~~~~g~-------~h~--nqI~~~~~~-----~---~~~~~t~g~Dd~ 385 (603)
T KOG0318|consen 325 ALTVSPDG-KT-IYSGSYDGHINSWDSGSGTSDRLAGK-------GHT--NQIKGMAAS-----E---SGELFTIGWDDT 385 (603)
T ss_pred EEEEcCCC-CE-EEeeccCceEEEEecCCccccccccc-------ccc--ceEEEEeec-----C---CCcEEEEecCCe
Confidence 2 33444 44 45688999999999988764322111 011 112222211 1 014777888888
Q ss_pred EEEEeCCCCC-----------Cce-------------------eeeeccc--------cCeEEEEEeCCCCceEEEEcCC
Q 016769 242 ILVWDIRNPG-----------IPL-------------------TAMKVHL--------EPVLCLSIDESCNGGISGGADQ 283 (383)
Q Consensus 242 i~~wdl~~~~-----------~~~-------------------~~~~~h~--------~~v~~~~~~~~~~~~~s~~~d~ 283 (383)
+++.++.... +|. ..++.+. -...++++++++..++.|+.|+
T Consensus 386 l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dg 465 (603)
T KOG0318|consen 386 LRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDG 465 (603)
T ss_pred EEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccc
Confidence 8888663210 010 0111111 1346788899999999999999
Q ss_pred cEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceE-EEecccccceeEEEEeCCCC
Q 016769 284 KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYHHATCNAVSFSSDCK 362 (383)
Q Consensus 284 ~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~h~~~v~~v~~spd~~ 362 (383)
.+.+|.|........ .....+...++.++|+||+.|||++...+++.+||+.+.+.. ..+.-|...|++++|+|+++
T Consensus 466 kvhvysl~g~~l~ee--~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~ 543 (603)
T KOG0318|consen 466 KVHVYSLSGDELKEE--AKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNK 543 (603)
T ss_pred eEEEEEecCCcccce--eeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCce
Confidence 999999976542221 123346678999999999999999999999999999887763 35556999999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCC
Q 016769 363 LMASASEDSTVALWELYPPH 382 (383)
Q Consensus 363 ~las~s~d~~i~~w~~~~~~ 382 (383)
++||||-|.+|.||++..|.
T Consensus 544 ~vATGSlDt~Viiysv~kP~ 563 (603)
T KOG0318|consen 544 LVATGSLDTNVIIYSVKKPA 563 (603)
T ss_pred EEEeccccceEEEEEccChh
Confidence 99999999999999998774
No 16
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=2.3e-30 Score=262.20 Aligned_cols=295 Identities=15% Similarity=0.231 Sum_probs=204.0
Q ss_pred eeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccc----ccccc-cccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH----RTVSS-SWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 14 l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
+.+|...|++++|+|++++|||||.|+.|+||+.... +.... .........+.++++.+. .+.+|++++.|++|
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~~las~~~Dg~v 557 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSY-IKSQVASSNFEGVV 557 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccC-CCCEEEEEeCCCeE
Confidence 4469999999999999999999999999999997532 11100 000011124556677653 35789999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||++++.... .+..+ . ..++ ..++.+.
T Consensus 558 ~lWd~~~~~~~~----~~~~H-------------~---------~~V~-------------------------~l~~~p~ 586 (793)
T PLN00181 558 QVWDVARSQLVT----EMKEH-------------E---------KRVW-------------------------SIDYSSA 586 (793)
T ss_pred EEEECCCCeEEE----EecCC-------------C---------CCEE-------------------------EEEEcCC
Confidence 999997653110 00000 0 0000 0112222
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
... ++++|+.|++|++||++++..+..+... ....+. .|.+. ....+++|+.|+.|++||++
T Consensus 587 ~~~-~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-----------~~v~~v---~~~~~---~g~~latgs~dg~I~iwD~~ 648 (793)
T PLN00181 587 DPT-LLASGSDDGSVKLWSINQGVSIGTIKTK-----------ANICCV---QFPSE---SGRSLAFGSADHKVYYYDLR 648 (793)
T ss_pred CCC-EEEEEcCCCEEEEEECCCCcEEEEEecC-----------CCeEEE---EEeCC---CCCEEEEEeCCCeEEEEECC
Confidence 222 4456677899999999988776655421 112222 12221 12358899999999999998
Q ss_pred CCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCe--eEEeeeeecCCCCeEEEEECCCCcEEEEEe
Q 016769 249 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGS--CVIKKEINLERPGISGTSIRPDSKIAATAG 326 (383)
Q Consensus 249 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~--~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~ 326 (383)
+...++..+.+|...|.++.|. ++..+++++.|++|++||+...... ......+..+...+..++|+|++++|++|+
T Consensus 649 ~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs 727 (793)
T PLN00181 649 NPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGS 727 (793)
T ss_pred CCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEe
Confidence 7655667778899999999996 4567899999999999998743110 001123445666788999999999999999
Q ss_pred CCCcEEEEEcCCCceEEEe-------------cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 327 WDRRVRIYNYRKGSALAIL-------------KYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~-------------~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.|++|++|+.....++..+ ..|...|.+++|+|++.+|++|+.||.|++|++.
T Consensus 728 ~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~~ 793 (793)
T PLN00181 728 ETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEMV 793 (793)
T ss_pred CCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEecC
Confidence 9999999998765443221 2355679999999999999999999999999973
No 17
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=3.1e-31 Score=225.63 Aligned_cols=292 Identities=20% Similarity=0.310 Sum_probs=214.1
Q ss_pred CCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCC
Q 016769 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (383)
Q Consensus 7 ~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ 86 (383)
|=+...++.||.+-|+||++.|...+++|||.|++++|||+.+++....+.+|. ..+-.+++++. .-++++++.|+
T Consensus 140 pwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi--~~vr~vavS~r--HpYlFs~gedk 215 (460)
T KOG0285|consen 140 PWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHI--ETVRGVAVSKR--HPYLFSAGEDK 215 (460)
T ss_pred cceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchh--heeeeeeeccc--CceEEEecCCC
Confidence 334566899999999999999999999999999999999999998877766554 34556666652 36899999999
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
.|+.||++..+.++ .+|+.... ++. .++.
T Consensus 216 ~VKCwDLe~nkvIR---------~YhGHlS~-----------------V~~-------------------------L~lh 244 (460)
T KOG0285|consen 216 QVKCWDLEYNKVIR---------HYHGHLSG-----------------VYC-------------------------LDLH 244 (460)
T ss_pred eeEEEechhhhhHH---------Hhccccce-----------------eEE-------------------------Eecc
Confidence 99999998765432 11110000 000 0011
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
+. .-++++|+.|.++|+||+++...+..+..+. ..+....+++. + ..+++|+-|++|++||
T Consensus 245 PT--ldvl~t~grDst~RvWDiRtr~~V~~l~GH~----------~~V~~V~~~~~---d----pqvit~S~D~tvrlWD 305 (460)
T KOG0285|consen 245 PT--LDVLVTGGRDSTIRVWDIRTRASVHVLSGHT----------NPVASVMCQPT---D----PQVITGSHDSTVRLWD 305 (460)
T ss_pred cc--ceeEEecCCcceEEEeeecccceEEEecCCC----------CcceeEEeecC---C----CceEEecCCceEEEee
Confidence 11 1255677789999999999999888886431 11111111111 1 1489999999999999
Q ss_pred CCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe
Q 016769 247 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG 326 (383)
Q Consensus 247 l~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~ 326 (383)
++.++ ...++..|...|.+++.+|....+++++.|+ |+.|++-.. ..+ ..+..+..-+++++.+.|+ ++++|+
T Consensus 306 l~agk-t~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g--~f~--~nlsgh~~iintl~~nsD~-v~~~G~ 378 (460)
T KOG0285|consen 306 LRAGK-TMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEG--EFL--QNLSGHNAIINTLSVNSDG-VLVSGG 378 (460)
T ss_pred eccCc-eeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCcc--chh--hccccccceeeeeeeccCc-eEEEcC
Confidence 99854 4677888999999999999988889988885 899987533 222 2244555678899998776 788999
Q ss_pred CCCcEEEEEcCCCceEEEec-----c---cccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 327 WDRRVRIYNYRKGSALAILK-----Y---HHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~~-----~---h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+|.+..||.+++..+...+ | -+..|.+.+|...|..|++|..|.+|++|.-+
T Consensus 379 dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 379 DNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred CceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence 99999999999886554331 1 24567888898888999999999999999764
No 18
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=2e-31 Score=247.78 Aligned_cols=145 Identities=23% Similarity=0.407 Sum_probs=132.0
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
++++++.|++.++|.... ..|++.+.+|...|.|+.|+|...++++||.|.++++||.......+.+ ..|...|.
T Consensus 507 YFatas~D~tArLWs~d~-~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF----~GH~~~V~ 581 (707)
T KOG0263|consen 507 YFATASHDQTARLWSTDH-NKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIF----TGHKGPVT 581 (707)
T ss_pred EEEecCCCceeeeeeccc-CCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEe----cCCCCceE
Confidence 577889999999998765 4578889999999999999999999999999999999999876554443 56778999
Q ss_pred EEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 312 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
+++|+|+|++|++|+.|+.|++||+..++.+..+.+|.+.|.++.||.||..||+||.|+.|++||+..+
T Consensus 582 al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 582 ALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred EEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999998643
No 19
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=9.4e-30 Score=226.15 Aligned_cols=288 Identities=22% Similarity=0.390 Sum_probs=210.8
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEE
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~ 90 (383)
+.+|++|.++|++++|+|++++|++++.||.+++|+..+.+.......|. ..+..+.+.+. ++.+++++.|+.+++
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~--~~i~~~~~~~~--~~~l~~~~~~~~i~i 77 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHT--GPVRDVAASAD--GTYLASGSSDKTIRL 77 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCC--cceeEEEECCC--CCEEEEEcCCCeEEE
Confidence 46788999999999999999999999999999999998765444433332 33457777773 468999999999999
Q ss_pred eecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCC
Q 016769 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGP 170 (383)
Q Consensus 91 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (383)
||+++++... .+..+.. .+. ...+.+. .
T Consensus 78 ~~~~~~~~~~----~~~~~~~----------------------~i~-------------------------~~~~~~~-~ 105 (289)
T cd00200 78 WDLETGECVR----TLTGHTS----------------------YVS-------------------------SVAFSPD-G 105 (289)
T ss_pred EEcCcccceE----EEeccCC----------------------cEE-------------------------EEEEcCC-C
Confidence 9998653110 0000000 000 0001122 2
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCC
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 250 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~ 250 (383)
+ +++++..++.+++||+++.+....+... .....++ .+.+. ...+++++.|+.|++||+++.
T Consensus 106 ~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~i~~~---~~~~~----~~~l~~~~~~~~i~i~d~~~~ 167 (289)
T cd00200 106 R-ILSSSSRDKTIKVWDVETGKCLTTLRGH----------TDWVNSV---AFSPD----GTFVASSSQDGTIKLWDLRTG 167 (289)
T ss_pred C-EEEEecCCCeEEEEECCCcEEEEEeccC----------CCcEEEE---EEcCc----CCEEEEEcCCCcEEEEEcccc
Confidence 3 3444555789999999977765555411 1112222 23332 124556666999999999863
Q ss_pred CCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCc
Q 016769 251 GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRR 330 (383)
Q Consensus 251 ~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~ 330 (383)
.+...+..|..++.++.+++++..+++++.|+.+++||+..... ......+...+.++.|+|++.++++++.|+.
T Consensus 168 -~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 242 (289)
T cd00200 168 -KCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKC----LGTLRGHENGVNSVAFSPDGYLLASGSEDGT 242 (289)
T ss_pred -ccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCce----ecchhhcCCceEEEEEcCCCcEEEEEcCCCc
Confidence 34666778888999999999988889999999999999875321 1222244557999999999888888888999
Q ss_pred EEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 331 VRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 331 i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
|++||+.+++....+..|...|.+++|+|++++|++++.|+.|++|+
T Consensus 243 i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 243 IRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 99999999998888889999999999999999999999999999996
No 20
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.98 E-value=2.6e-30 Score=227.09 Aligned_cols=290 Identities=18% Similarity=0.304 Sum_probs=211.4
Q ss_pred eeeeeecCCceeeEEEeCCCC-eEEEecCCCeEEEeeCccc--ccc--cccc--------cccccceeeeeeecCCCCcc
Q 016769 11 VAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQH--RTV--SSSW--------VHSAAHGIVSVATGPSIGLN 77 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~-~L~sgs~D~~v~vW~~~~~--~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~ 77 (383)
..++.+|+.+|.+.+++|-.. .|++|+.|-+.|+|++... ++. ..++ .-.....+.++++.. +|+
T Consensus 171 ~~kvl~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~--~G~ 248 (524)
T KOG0273|consen 171 KAKVLRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNN--DGT 248 (524)
T ss_pred ceeeccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecC--CCC
Confidence 334444999999999999877 9999999999999998641 111 1111 001224688888887 478
Q ss_pred eeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCC
Q 016769 78 KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNR 157 (383)
Q Consensus 78 ~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (383)
.|++|+.||.+|+|+...... . ++.. .+.| ++...+
T Consensus 249 ~LatG~~~G~~riw~~~G~l~-~----tl~~----------HkgP------------I~slKW----------------- 284 (524)
T KOG0273|consen 249 LLATGSEDGEARIWNKDGNLI-S----TLGQ----------HKGP------------IFSLKW----------------- 284 (524)
T ss_pred eEEEeecCcEEEEEecCchhh-h----hhhc----------cCCc------------eEEEEE-----------------
Confidence 999999999999999754321 1 0000 0000 111011
Q ss_pred ccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEe
Q 016769 158 SFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY 237 (383)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~ 237 (383)
...| .|+ .+++-|+++-+||..++..-..+...+.+ . .-+. +. ++..+++++
T Consensus 285 --------nk~G-~yi-lS~~vD~ttilwd~~~g~~~q~f~~~s~~---~---------lDVd-W~-----~~~~F~ts~ 336 (524)
T KOG0273|consen 285 --------NKKG-TYI-LSGGVDGTTILWDAHTGTVKQQFEFHSAP---A---------LDVD-WQ-----SNDEFATSS 336 (524)
T ss_pred --------cCCC-CEE-EeccCCccEEEEeccCceEEEeeeeccCC---c---------cceE-Ee-----cCceEeecC
Confidence 0112 244 45677899999999887754433321110 0 0011 11 122478899
Q ss_pred CCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC
Q 016769 238 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 238 ~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p 317 (383)
.|+.|+++.+.. ..|..++.+|..+|.++.|++.+..|++++.|++++||++....... .+..|...|..+.++|
T Consensus 337 td~~i~V~kv~~-~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~----~l~~Hskei~t~~wsp 411 (524)
T KOG0273|consen 337 TDGCIHVCKVGE-DRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVH----DLQAHSKEIYTIKWSP 411 (524)
T ss_pred CCceEEEEEecC-CCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchh----hhhhhccceeeEeecC
Confidence 999999999876 56788999999999999999999999999999999999976544322 2345666788888887
Q ss_pred CCc---------EEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 318 DSK---------IAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 318 ~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+. .+++++.|.+|++||+.++.++.++..|+.+|.+|+|||+|+++|+|+.||.|.+|+.-
T Consensus 412 ~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~ 482 (524)
T KOG0273|consen 412 TGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTK 482 (524)
T ss_pred CCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecccc
Confidence 653 69999999999999999999999999999999999999999999999999999999873
No 21
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.98 E-value=1.4e-31 Score=231.57 Aligned_cols=292 Identities=20% Similarity=0.314 Sum_probs=215.3
Q ss_pred CCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccc--ccccccccccceeeeeeecCCCCcceeEeccc
Q 016769 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT--VSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (383)
Q Consensus 7 ~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (383)
|.+...++..|.+.|..+.|-++...|+||+.|..|++|++...+. ...+. +....+..+.+.+ ++..+++++.
T Consensus 164 pS~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLa--Gs~g~it~~d~d~--~~~~~iAas~ 239 (459)
T KOG0288|consen 164 PSRALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLA--GSLGNITSIDFDS--DNKHVIAASN 239 (459)
T ss_pred chhhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhh--ccCCCcceeeecC--CCceEEeecC
Confidence 4445567889999999999999999999999999999999987763 22322 2334678888887 4688999999
Q ss_pred CCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
|+.+++|++....... +...|..++.-.+
T Consensus 240 d~~~r~Wnvd~~r~~~-------TLsGHtdkVt~ak-------------------------------------------- 268 (459)
T KOG0288|consen 240 DKNLRLWNVDSLRLRH-------TLSGHTDKVTAAK-------------------------------------------- 268 (459)
T ss_pred CCceeeeeccchhhhh-------hhcccccceeeeh--------------------------------------------
Confidence 9999999998764211 1111111111000
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
+... ...+++|+.|++|++|||....+..+.-.. .. |..+.. +...+++|+.|++|++
T Consensus 269 ~~~~--~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~---------S~----cnDI~~-------~~~~~~SgH~DkkvRf 326 (459)
T KOG0288|consen 269 FKLS--HSRVVSGSADRTIKLWDLQKAYCSKTVLPG---------SQ----CNDIVC-------SISDVISGHFDKKVRF 326 (459)
T ss_pred hhcc--ccceeeccccchhhhhhhhhhheecccccc---------cc----ccceEe-------cceeeeecccccceEE
Confidence 0000 012678899999999999886665433211 00 111110 0123678999999999
Q ss_pred EeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEE
Q 016769 245 WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 324 (383)
Q Consensus 245 wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s 324 (383)
||++++.. ......+. .|.+++...++..+++++.|.++.+.|+........+...-.......+.+.|||++.|+++
T Consensus 327 wD~Rs~~~-~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaA 404 (459)
T KOG0288|consen 327 WDIRSADK-TRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAA 404 (459)
T ss_pred EeccCCce-eeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeee
Confidence 99998543 45555554 89999999999999999999999999998776555554433333445788999999999999
Q ss_pred EeCCCcEEEEEcCCCceEEEeccccc--ceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 325 AGWDRRVRIYNYRKGSALAILKYHHA--TCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 325 ~~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
||.||.|+||++.+++..+.++.... .|.+++|+|.|+.|++++.+..+.+|.
T Consensus 405 GS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 405 GSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred ccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 99999999999999999887765433 599999999999999999999999994
No 22
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-30 Score=213.11 Aligned_cols=288 Identities=21% Similarity=0.289 Sum_probs=203.9
Q ss_pred eeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEe
Q 016769 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~W 91 (383)
-.|.||..+++.|.|+.+|.+|+|++.|.+..||...++.++....+|.. .+.++.... +...++||+.|.++++|
T Consensus 4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtG--avW~~Did~--~s~~liTGSAD~t~kLW 79 (327)
T KOG0643|consen 4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTG--AVWCCDIDW--DSKHLITGSADQTAKLW 79 (327)
T ss_pred cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCc--eEEEEEecC--CcceeeeccccceeEEE
Confidence 36899999999999999999999999999999999999999988887763 466666665 45789999999999999
Q ss_pred ecCCCCCCCCCeeeeecCc-eeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCC
Q 016769 92 DIENGGLSSNPSLTIKTNS-YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGP 170 (383)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (383)
|+++|.++. ...... ... ..++..|+
T Consensus 80 Dv~tGk~la----~~k~~~~Vk~-------------------------------------------------~~F~~~gn 106 (327)
T KOG0643|consen 80 DVETGKQLA----TWKTNSPVKR-------------------------------------------------VDFSFGGN 106 (327)
T ss_pred EcCCCcEEE----EeecCCeeEE-------------------------------------------------EeeccCCc
Confidence 999985321 111110 000 11222233
Q ss_pred ceeeecc---CCcceEEEEecCCCC-------eeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC
Q 016769 171 KYMAVAG---EQLSEVEIWDLNTAE-------RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 240 (383)
Q Consensus 171 ~~~~~~g---~~~~~i~~Wdl~~~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg 240 (383)
.++++.. +..+.|.++|++... +..+++.+ ..... . ..+.|.+ ..+++|.+||
T Consensus 107 ~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~----------~skit-~--a~Wg~l~----~~ii~Ghe~G 169 (327)
T KOG0643|consen 107 LILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTP----------DSKIT-S--ALWGPLG----ETIIAGHEDG 169 (327)
T ss_pred EEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCC----------cccee-e--eeecccC----CEEEEecCCC
Confidence 2222221 122468888887432 23333211 11111 1 1133322 3589999999
Q ss_pred cEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCc
Q 016769 241 SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK 320 (383)
Q Consensus 241 ~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~ 320 (383)
.|.+||++++...+...+.|...|+.+.++++...+++++.|.+-++||....+ ..+....+ -.+++.+++|...
T Consensus 170 ~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~----v~Kty~te-~PvN~aaisP~~d 244 (327)
T KOG0643|consen 170 SISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLE----VLKTYTTE-RPVNTAAISPLLD 244 (327)
T ss_pred cEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeecccee----eEEEeeec-ccccceecccccc
Confidence 999999998766667778899999999999999999999999999999987432 22333322 4689999999877
Q ss_pred EEEEEeCCCcE--------------EEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 321 IAATAGWDRRV--------------RIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 321 ~l~s~~~dg~i--------------~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.++.|+....- |.|++-.-+.+..+++|-++|++|+|||||+..+||++||.|++.-+
T Consensus 245 ~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~F 316 (327)
T KOG0643|consen 245 HVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHF 316 (327)
T ss_pred eEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEe
Confidence 77776643311 11122122346788999999999999999999999999999999754
No 23
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.98 E-value=7.3e-32 Score=228.72 Aligned_cols=230 Identities=19% Similarity=0.377 Sum_probs=181.7
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCC
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~ 97 (383)
...|+|+.| |...++||..|++|++||.....++..+.+|. +++.++.+.. ..++||++|.||++||+++++
T Consensus 197 skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHt--GSVLCLqyd~----rviisGSSDsTvrvWDv~tge 268 (499)
T KOG0281|consen 197 SKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLECLKILTGHT--GSVLCLQYDE----RVIVSGSSDSTVRVWDVNTGE 268 (499)
T ss_pred CCceEEEEe--cchhhhcccccCceEEeccccHHHHHhhhcCC--CcEEeeeccc----eEEEecCCCceEEEEeccCCc
Confidence 578999999 45589999999999999999888888887775 4688887764 678899999999999999986
Q ss_pred CCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeecc
Q 016769 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAG 177 (383)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 177 (383)
++.+- .|.| .. .+
T Consensus 269 ~l~tl--------ihHc--------------------------------------------ea-----------VL---- 281 (499)
T KOG0281|consen 269 PLNTL--------IHHC--------------------------------------------EA-----------VL---- 281 (499)
T ss_pred hhhHH--------hhhc--------------------------------------------ce-----------eE----
Confidence 42210 0000 00 00
Q ss_pred CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC--cee
Q 016769 178 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI--PLT 255 (383)
Q Consensus 178 ~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~--~~~ 255 (383)
.++ |. + ..+++++.|.+|.+||+.++.. ..+
T Consensus 282 ----hlr-------------------------------------f~----n--g~mvtcSkDrsiaVWdm~sps~it~rr 314 (499)
T KOG0281|consen 282 ----HLR-------------------------------------FS----N--GYMVTCSKDRSIAVWDMASPTDITLRR 314 (499)
T ss_pred ----EEE-------------------------------------Ee----C--CEEEEecCCceeEEEeccCchHHHHHH
Confidence 000 10 1 1478999999999999987642 235
Q ss_pred eeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEE
Q 016769 256 AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 335 (383)
Q Consensus 256 ~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd 335 (383)
.+-+|..+|+.+.|+.. ++++++.|.+|++|++... .+...+..|.-+|.++.+ .++++++|++|.+|++||
T Consensus 315 VLvGHrAaVNvVdfd~k--yIVsASgDRTikvW~~st~----efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwd 386 (499)
T KOG0281|consen 315 VLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTC----EFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 386 (499)
T ss_pred HHhhhhhheeeeccccc--eEEEecCCceEEEEeccce----eeehhhhcccccceehhc--cCeEEEecCCCceEEEEe
Confidence 66789999999999865 6789999999999998632 233445667677887766 578999999999999999
Q ss_pred cCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 336 YRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 336 ~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+..|.++..++||++-|.++.| |.+.+++|+.||+|++||+.
T Consensus 387 i~~G~cLRvLeGHEeLvRciRF--d~krIVSGaYDGkikvWdl~ 428 (499)
T KOG0281|consen 387 IECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 428 (499)
T ss_pred ccccHHHHHHhchHHhhhheee--cCceeeeccccceEEEEecc
Confidence 9999999999999999999999 56889999999999999984
No 24
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=8.4e-30 Score=235.22 Aligned_cols=186 Identities=19% Similarity=0.382 Sum_probs=150.4
Q ss_pred eeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
.++.+|. .+.+++|+..+.+++.++.- +..+|. .|.|.. ..++.|...|.+.+||+.+.
T Consensus 386 ~~~~Sga-~~SikiWn~~t~kciRTi~~------------~y~l~~---~Fvpgd----~~Iv~G~k~Gel~vfdlaS~- 444 (888)
T KOG0306|consen 386 ILLASGA-GESIKIWNRDTLKCIRTITC------------GYILAS---KFVPGD----RYIVLGTKNGELQVFDLASA- 444 (888)
T ss_pred eeeeecC-CCcEEEEEccCcceeEEecc------------ccEEEE---EecCCC----ceEEEeccCCceEEEEeehh-
Confidence 3444443 46899999999999888853 133332 355543 36899999999999999874
Q ss_pred CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCC------ee---EEeeeeecCCCCeEEEEECCCCcEE
Q 016769 252 IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG------SC---VIKKEINLERPGISGTSIRPDSKIA 322 (383)
Q Consensus 252 ~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~------~~---~~~~~~~~~~~~i~~~~~~p~~~~l 322 (383)
..+.+++.|.+.+..++..|++.++++||+|++|++||+..... +. ..+..++. ...+.++++|||++++
T Consensus 445 ~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel-~ddvL~v~~Spdgk~L 523 (888)
T KOG0306|consen 445 SLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLEL-EDDVLCVSVSPDGKLL 523 (888)
T ss_pred hhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEec-cccEEEEEEcCCCcEE
Confidence 45677889999999999999999999999999999999742111 10 00111222 3569999999999999
Q ss_pred EEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 323 ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 323 ~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
|.+=.|.++++|-+++.+..-.+-||.-+|.|+.+|||+++++|||.|.+|++|-+.
T Consensus 524 aVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLd 580 (888)
T KOG0306|consen 524 AVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLD 580 (888)
T ss_pred EEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccc
Confidence 999999999999999999998999999999999999999999999999999999764
No 25
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.97 E-value=3.8e-29 Score=213.47 Aligned_cols=328 Identities=16% Similarity=0.197 Sum_probs=218.4
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
..+.+|.+|+++|.+++.+|+.++++|||.|..-.||+..++..+..+..|. ..+.++.|+- ++.+|+||+.+|.|
T Consensus 55 dS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHK--DSVt~~~Fsh--dgtlLATGdmsG~v 130 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHK--DSVTCCSFSH--DGTLLATGDMSGKV 130 (399)
T ss_pred cceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCC--CceEEEEEcc--CceEEEecCCCccE
Confidence 4567899999999999999999999999999999999998888666665554 4688999987 47899999999999
Q ss_pred EEeecCCCCCCCCCeeeee--cCceeeeeEEeecccccccccc---CCCCccceeccCcccccCccccccccCCccceec
Q 016769 89 KCWDIENGGLSSNPSLTIK--TNSYHFCKLSLVKEPYANAKQA---NEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
++|.+.++... ..+- .....+-.++ |.+....+ .+...+|.+..+... ....+ ........
T Consensus 131 ~v~~~stg~~~----~~~~~e~~dieWl~WH----p~a~illAG~~DGsvWmw~ip~~~~~-kv~~G-----h~~~ct~G 196 (399)
T KOG0296|consen 131 LVFKVSTGGEQ----WKLDQEVEDIEWLKWH----PRAHILLAGSTDGSVWMWQIPSQALC-KVMSG-----HNSPCTCG 196 (399)
T ss_pred EEEEcccCceE----EEeecccCceEEEEec----ccccEEEeecCCCcEEEEECCCccee-eEecC-----CCCCcccc
Confidence 99999887421 1110 1111111111 11111111 111122222111000 00000 01112223
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
.+.++|++. +.+..|++|++|++.+++++.++.+......+ |+... .....++.|..++.++
T Consensus 197 ~f~pdGKr~--~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~---------~~~~~-------~~~~~~~~g~~e~~~~ 258 (399)
T KOG0296|consen 197 EFIPDGKRI--LTGYDDGTIIVWNPKTGQPLHKITQAEGLELP---------CISLN-------LAGSTLTKGNSEGVAC 258 (399)
T ss_pred cccCCCceE--EEEecCceEEEEecCCCceeEEecccccCcCC---------ccccc-------cccceeEeccCCccEE
Confidence 345777754 34566899999999999998888753311111 11110 0011345566666666
Q ss_pred EEeCCCCCCcee-------eeeccc---cCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEE
Q 016769 244 VWDIRNPGIPLT-------AMKVHL---EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGT 313 (383)
Q Consensus 244 ~wdl~~~~~~~~-------~~~~h~---~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~ 313 (383)
+-...+++.... ....+. +.|..+.++......+.|+-||+|.|||+...+-+.. ..+..+|..+
T Consensus 259 ~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~-----c~he~~V~~l 333 (399)
T KOG0296|consen 259 GVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHI-----CEHEDGVTKL 333 (399)
T ss_pred EEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhhee-----ccCCCceEEE
Confidence 665444321100 011233 3445555555555668889999999999986553332 2345679999
Q ss_pred EECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 314 SIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 314 ~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.|-+ ..||++++.||+|+.||.++|+...++.||+..|.+.+++|+.++++|+|.|++.++|+.
T Consensus 334 ~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v 397 (399)
T KOG0296|consen 334 KWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEV 397 (399)
T ss_pred EEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEec
Confidence 9988 679999999999999999999999999999999999999999999999999999999987
No 26
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=1.2e-29 Score=204.68 Aligned_cols=252 Identities=19% Similarity=0.331 Sum_probs=188.8
Q ss_pred CCCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccC
Q 016769 6 PPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 6 ~~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
.|+.....|..|+++|+++.|+.||++.+|++.|.+||+||+..+.++.....|+. .+.-++.+- +..+|++||.|
T Consensus 5 ~ptkr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~--EVlD~~~s~--Dnskf~s~GgD 80 (307)
T KOG0316|consen 5 LPTKRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGH--EVLDAALSS--DNSKFASCGGD 80 (307)
T ss_pred CcchhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCc--eeeeccccc--cccccccCCCC
Confidence 34446678999999999999999999999999999999999998888877766653 344444433 45789999999
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
..+.+||+++|+..++ .+ .|
T Consensus 81 k~v~vwDV~TGkv~Rr----~r---gH----------------------------------------------------- 100 (307)
T KOG0316|consen 81 KAVQVWDVNTGKVDRR----FR---GH----------------------------------------------------- 100 (307)
T ss_pred ceEEEEEcccCeeeee----cc---cc-----------------------------------------------------
Confidence 9999999998853220 00 00
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 245 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w 245 (383)
+.+-++|++ .+ ....+++|+-|.++++|
T Consensus 101 -----------~aqVNtV~f------------Ne-----------------------------esSVv~SgsfD~s~r~w 128 (307)
T KOG0316|consen 101 -----------LAQVNTVRF------------NE-----------------------------ESSVVASGSFDSSVRLW 128 (307)
T ss_pred -----------cceeeEEEe------------cC-----------------------------cceEEEeccccceeEEE
Confidence 000112221 00 00136678888888888
Q ss_pred eCCCCC-CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEE
Q 016769 246 DIRNPG-IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 324 (383)
Q Consensus 246 dl~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s 324 (383)
|.|+.. .|++.+....+.|.++.+.. -.++.|+.||+++.||++..+. ...+....|+++.|++|++...+
T Consensus 129 DCRS~s~ePiQildea~D~V~Si~v~~--heIvaGS~DGtvRtydiR~G~l------~sDy~g~pit~vs~s~d~nc~La 200 (307)
T KOG0316|consen 129 DCRSRSFEPIQILDEAKDGVSSIDVAE--HEIVAGSVDGTVRTYDIRKGTL------SSDYFGHPITSVSFSKDGNCSLA 200 (307)
T ss_pred EcccCCCCccchhhhhcCceeEEEecc--cEEEeeccCCcEEEEEeeccee------ehhhcCCcceeEEecCCCCEEEE
Confidence 887643 35666666666777776653 3468899999999999986542 22345578999999999999999
Q ss_pred EeCCCcEEEEEcCCCceEEEecccccceeEE--EEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 325 AGWDRRVRIYNYRKGSALAILKYHHATCNAV--SFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 325 ~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v--~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
++.|+++++.|-++|+.++.+++|++.-..+ +++....++++||+||.|.+||+-+.
T Consensus 201 ~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~ 259 (307)
T KOG0316|consen 201 SSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDE 259 (307)
T ss_pred eeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccc
Confidence 9999999999999999999999999866555 45555569999999999999999654
No 27
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.3e-29 Score=233.75 Aligned_cols=302 Identities=17% Similarity=0.240 Sum_probs=218.4
Q ss_pred CeeeeeecCCceeeEEE-eCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 10 PVAVLRGHRASVTDVCF-HQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f-~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
++..+-|-.+.|++|+| .|+.++||.++.-..+|+++..+..|. .+.+|. ..+.++.... .+..|+|||.|+++
T Consensus 315 i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~--e~vlSL~~~~--~g~llat~sKD~sv 389 (775)
T KOG0319|consen 315 IVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHT--EAVLSLDVWS--SGDLLATGSKDKSV 389 (775)
T ss_pred EehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCch--hheeeeeecc--cCcEEEEecCCceE
Confidence 34456688999999998 567789999999999999998876665 444444 3466665222 24588999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++|.++++..... .+. ...++... .+++ .+...
T Consensus 390 ilWr~~~~~~~~~---~~a--------------------~~~gH~~s--------------------vgav----a~~~~ 422 (775)
T KOG0319|consen 390 ILWRLNNNCSKSL---CVA--------------------QANGHTNS--------------------VGAV----AGSKL 422 (775)
T ss_pred EEEEecCCcchhh---hhh--------------------hhcccccc--------------------ccee----eeccc
Confidence 9999965421110 000 00000000 0000 01111
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
+.. +++++++|.++++|++...+.-.. +......+....+...+.|.++ .|+ ...+++|++|++.+||++.
T Consensus 423 ~as-ffvsvS~D~tlK~W~l~~s~~~~~-~~~~~~~~t~~aHdKdIN~Vai---a~n----dkLiAT~SqDktaKiW~le 493 (775)
T KOG0319|consen 423 GAS-FFVSVSQDCTLKLWDLPKSKETAF-PIVLTCRYTERAHDKDINCVAI---APN----DKLIATGSQDKTAKIWDLE 493 (775)
T ss_pred Ccc-EEEEecCCceEEEecCCCcccccc-cceehhhHHHHhhcccccceEe---cCC----CceEEecccccceeeeccc
Confidence 222 456678899999999976221100 0000000111223344555543 333 2468899999999999998
Q ss_pred CCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC
Q 016769 249 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD 328 (383)
Q Consensus 249 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d 328 (383)
+ .....++.+|...|.++.|++..+.++++|.|.+|+||.+++.++ + +.+..|...|..+.|-.+++.|+|++.|
T Consensus 494 ~-~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSC--l--kT~eGH~~aVlra~F~~~~~qliS~~ad 568 (775)
T KOG0319|consen 494 Q-LRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSC--L--KTFEGHTSAVLRASFIRNGKQLISAGAD 568 (775)
T ss_pred C-ceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEecccee--e--eeecCccceeEeeeeeeCCcEEEeccCC
Confidence 5 456789999999999999999888899999999999999986643 2 4566777889999999999999999999
Q ss_pred CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 329 RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 329 g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
|-|++|++.++.++.++..|...|++++-+|+..+++||+.||.|.+|.
T Consensus 569 GliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 569 GLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred CcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEee
Confidence 9999999999999999999999999999999999999999999999995
No 28
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-28 Score=203.03 Aligned_cols=255 Identities=19% Similarity=0.268 Sum_probs=179.9
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
.|+..|.||.-.|..+..++||++.+|+|.|+++|+||+.++++...+.+|. ..+.++++++ +.++++||+.|.||
T Consensus 54 ~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~--~dVlsva~s~--dn~qivSGSrDkTi 129 (315)
T KOG0279|consen 54 VPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHT--KDVLSVAFST--DNRQIVSGSRDKTI 129 (315)
T ss_pred ceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecC--CceEEEEecC--CCceeecCCCccee
Confidence 3678899999999999999999999999999999999999887666655554 5789999998 46899999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||..... .+.+..... ...+. ++ -++|.
T Consensus 130 klwnt~g~c-----------------k~t~~~~~~--------~~WVs---------------------cv----rfsP~ 159 (315)
T KOG0279|consen 130 KLWNTLGVC-----------------KYTIHEDSH--------REWVS---------------------CV----RFSPN 159 (315)
T ss_pred eeeeecccE-----------------EEEEecCCC--------cCcEE---------------------EE----EEcCC
Confidence 999986431 111111000 00000 00 01222
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
....++++++.|+++|+||+++.+....+.. +.+.. .++ .++|+.+ ..++|+.||.+.+||++
T Consensus 160 ~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~g----------h~~~v--~t~-~vSpDGs----lcasGgkdg~~~LwdL~ 222 (315)
T KOG0279|consen 160 ESNPIIVSASWDKTVKVWNLRNCQLRTTFIG----------HSGYV--NTV-TVSPDGS----LCASGGKDGEAMLWDLN 222 (315)
T ss_pred CCCcEEEEccCCceEEEEccCCcchhhcccc----------ccccE--EEE-EECCCCC----EEecCCCCceEEEEEcc
Confidence 2234667788899999999999775444432 11222 222 2455432 46789999999999999
Q ss_pred CCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec-----CCCCeEEEEECCCCcEEE
Q 016769 249 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL-----ERPGISGTSIRPDSKIAA 323 (383)
Q Consensus 249 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~-----~~~~i~~~~~~p~~~~l~ 323 (383)
.... +..+ .|...|.++.|.|..-. +....+..|+|||++.......+...... ......++++++||+.|.
T Consensus 223 ~~k~-lysl-~a~~~v~sl~fspnryw-L~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf 299 (315)
T KOG0279|consen 223 EGKN-LYSL-EAFDIVNSLCFSPNRYW-LCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLF 299 (315)
T ss_pred CCce-eEec-cCCCeEeeEEecCCcee-EeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEE
Confidence 8554 4333 57889999999997644 44456777999999876543333322211 133456788999999999
Q ss_pred EEeCCCcEEEEEcC
Q 016769 324 TAGWDRRVRIYNYR 337 (383)
Q Consensus 324 s~~~dg~i~iwd~~ 337 (383)
+|-.|+.|++|.+.
T Consensus 300 ~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 300 AGYTDNVIRVWQVA 313 (315)
T ss_pred eeecCCcEEEEEee
Confidence 99999999999874
No 29
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.97 E-value=4.8e-28 Score=196.95 Aligned_cols=263 Identities=17% Similarity=0.261 Sum_probs=189.5
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeCccccc--ccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCC
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT--VSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~ 95 (383)
.+.|+.++..||++.||+++. ..||+||+.+.+. +.....| ...+.++.|.. ++++++|||.||++||||+..
T Consensus 40 dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h--~kNVtaVgF~~--dgrWMyTgseDgt~kIWdlR~ 114 (311)
T KOG0315|consen 40 DSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGH--TKNVTAVGFQC--DGRWMYTGSEDGTVKIWDLRS 114 (311)
T ss_pred ccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEecc--CCceEEEEEee--cCeEEEecCCCceEEEEeccC
Confidence 357899999999999997665 4789999977654 3333333 34689999987 579999999999999999976
Q ss_pred CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeee
Q 016769 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAV 175 (383)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (383)
..+-+.- . ..++.++ ..+.+++.. +.
T Consensus 115 ~~~qR~~--------------~-----------~~spVn~---------------------------vvlhpnQte--Li 140 (311)
T KOG0315|consen 115 LSCQRNY--------------Q-----------HNSPVNT---------------------------VVLHPNQTE--LI 140 (311)
T ss_pred cccchhc--------------c-----------CCCCcce---------------------------EEecCCcce--EE
Confidence 4331100 0 0000000 001122222 34
Q ss_pred ccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC-----C
Q 016769 176 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN-----P 250 (383)
Q Consensus 176 ~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~-----~ 250 (383)
+|++.+.|++|||....+-..+..+.. . .+..++ ..|+ ..-++.+...|...+|++-. .
T Consensus 141 s~dqsg~irvWDl~~~~c~~~liPe~~-------~--~i~sl~---v~~d----gsml~a~nnkG~cyvW~l~~~~~~s~ 204 (311)
T KOG0315|consen 141 SGDQSGNIRVWDLGENSCTHELIPEDD-------T--SIQSLT---VMPD----GSMLAAANNKGNCYVWRLLNHQTASE 204 (311)
T ss_pred eecCCCcEEEEEccCCccccccCCCCC-------c--ceeeEE---EcCC----CcEEEEecCCccEEEEEccCCCcccc
Confidence 578889999999988765433321110 0 000111 1222 12466678889999999743 2
Q ss_pred CCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCc
Q 016769 251 GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRR 330 (383)
Q Consensus 251 ~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~ 330 (383)
-.|+..++.|+..+...-++|+.++++++|.|++++||+.+.. .+....++.+...+...+||.|++||++|+.|+.
T Consensus 205 l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~---~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~ 281 (311)
T KOG0315|consen 205 LEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF---FKLELVLTGHQRWVWDCAFSADGEYLVTASSDHT 281 (311)
T ss_pred ceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc---eeeEEEeecCCceEEeeeeccCccEEEecCCCCc
Confidence 3567788999999999999999999999999999999998754 3444556667778999999999999999999999
Q ss_pred EEEEEcCCCceEEEecccccceeEEEEe
Q 016769 331 VRIYNYRKGSALAILKYHHATCNAVSFS 358 (383)
Q Consensus 331 i~iwd~~~~~~~~~~~~h~~~v~~v~~s 358 (383)
+++||+..++.+..+++|.+...|++..
T Consensus 282 ~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 282 ARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred eeecccccCceeeecCCcccccEEEEee
Confidence 9999999999999999999988887764
No 30
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.97 E-value=1.3e-29 Score=206.24 Aligned_cols=248 Identities=22% Similarity=0.352 Sum_probs=180.9
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
=+.+|+||++.|+..+++.+...-||+++|-+-+|||..++-.+..+. +.|.+.+++|+. +.++|++||.+..+|
T Consensus 51 wigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~---hkhivk~~af~~--ds~~lltgg~ekllr 125 (334)
T KOG0278|consen 51 WIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE---HKHIVKAVAFSQ--DSNYLLTGGQEKLLR 125 (334)
T ss_pred cEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh---hhheeeeEEecc--cchhhhccchHHHhh
Confidence 356899999999999999999999999999999999999887776542 346788899987 468999999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
++|++.+++... .+..+...+ + . ..-|.. .
T Consensus 126 vfdln~p~App~---E~~ghtg~I-------------------r------------------------~---v~wc~e-D 155 (334)
T KOG0278|consen 126 VFDLNRPKAPPK---EISGHTGGI-------------------R------------------------T---VLWCHE-D 155 (334)
T ss_pred hhhccCCCCCch---hhcCCCCcc-------------------e------------------------e---EEEecc-C
Confidence 999987654221 000000000 0 0 000111 1
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
+.++.+ ..|++||+||.+++..+.++.-+..+.|...+..+ ++++-...+.|++||..+
T Consensus 156 -~~iLSS-add~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG-------------------~ilTia~gssV~Fwdaks 214 (334)
T KOG0278|consen 156 -KCILSS-ADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDG-------------------RILTIAYGSSVKFWDAKS 214 (334)
T ss_pred -ceEEee-ccCCceEEEEeccCcEEEEEecCCCCcceeeccCC-------------------CEEEEecCceeEEecccc
Confidence 223333 66899999999999988888765544433322222 244555567788888665
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR 329 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg 329 (383)
-. .++..+ +. ..|.+.+++|+..++++|+.|.
T Consensus 215 f~-~lKs~k--------------------------------------------~P---~nV~SASL~P~k~~fVaGged~ 246 (334)
T KOG0278|consen 215 FG-LLKSYK--------------------------------------------MP---CNVESASLHPKKEFFVAGGEDF 246 (334)
T ss_pred cc-ceeecc--------------------------------------------Cc---cccccccccCCCceEEecCcce
Confidence 21 111110 00 1366777899999999999999
Q ss_pred cEEEEEcCCCceEEEe-cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 330 RVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 330 ~i~iwd~~~~~~~~~~-~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
.++.||..++..+..+ ++|.++|.||.|+|||...|+||+||+|+||...+-
T Consensus 247 ~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~ 299 (334)
T KOG0278|consen 247 KVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPG 299 (334)
T ss_pred EEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCC
Confidence 9999999999999886 899999999999999999999999999999998653
No 31
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=1.3e-27 Score=226.32 Aligned_cols=292 Identities=24% Similarity=0.353 Sum_probs=215.4
Q ss_pred eeeeeec-CCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc--cccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 11 VAVLRGH-RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 11 ~~~l~gH-~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
..++.+| ...|.++.|+++|+.|++++.|+.+++|++...+ ....+..| ...+..++|+++ +..+++++.|.+
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h--~~~v~~~~fs~d--~~~l~s~s~D~t 226 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGH--TRGVSDVAFSPD--GSYLLSGSDDKT 226 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhcccccc--ccceeeeEECCC--CcEEEEecCCce
Confidence 4556566 7999999999999999999999999999996665 44444333 356888999984 679999999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
+|+||++.... ...++..+.. .....++.+
T Consensus 227 iriwd~~~~~~---~~~~l~gH~~-----------------------------------------------~v~~~~f~p 256 (456)
T KOG0266|consen 227 LRIWDLKDDGR---NLKTLKGHST-----------------------------------------------YVTSVAFSP 256 (456)
T ss_pred EEEeeccCCCe---EEEEecCCCC-----------------------------------------------ceEEEEecC
Confidence 99999943310 0111111100 001112334
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
.+ + ++++|+.|++||+||++++++...+..+. +.+ ....|.++. ..+++++.|+.|++||+
T Consensus 257 ~g-~-~i~Sgs~D~tvriWd~~~~~~~~~l~~hs----------~~i---s~~~f~~d~----~~l~s~s~d~~i~vwd~ 317 (456)
T KOG0266|consen 257 DG-N-LLVSGSDDGTVRIWDVRTGECVRKLKGHS----------DGI---SGLAFSPDG----NLLVSASYDGTIRVWDL 317 (456)
T ss_pred CC-C-EEEEecCCCcEEEEeccCCeEEEeeeccC----------Cce---EEEEECCCC----CEEEEcCCCccEEEEEC
Confidence 45 2 56778889999999999988887776421 111 112344332 35778899999999999
Q ss_pred CCCCC-ceeeeecccc--CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC---CeEEEEECCCCcE
Q 016769 248 RNPGI-PLTAMKVHLE--PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP---GISGTSIRPDSKI 321 (383)
Q Consensus 248 ~~~~~-~~~~~~~h~~--~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~---~i~~~~~~p~~~~ 321 (383)
.+... +...+..+.. ++.++.|++++.+++++..|+.+++||+......... ..+.. .+....+++++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 393 (456)
T KOG0266|consen 318 ETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTY----TGHSNLVRCIFSPTLSTGGKL 393 (456)
T ss_pred CCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeee----cccCCcceeEecccccCCCCe
Confidence 88553 2455555554 4999999999999999999999999999854432221 12222 3445556789999
Q ss_pred EEEEeCCCcEEEEEcCCCceEEEeccc-ccceeEEEEeCCCCEEEEEe--CCCcEEEEeCC
Q 016769 322 AATAGWDRRVRIYNYRKGSALAILKYH-HATCNAVSFSSDCKLMASAS--EDSTVALWELY 379 (383)
Q Consensus 322 l~s~~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~v~~spd~~~las~s--~d~~i~~w~~~ 379 (383)
+++|+.|+.|++||+.++..+..+.+| ...+..++++|..+++++++ .|+.|++|...
T Consensus 394 i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 394 IYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred EEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 999999999999999999888899999 88899999999999999999 79999999863
No 32
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.96 E-value=4.1e-28 Score=208.14 Aligned_cols=309 Identities=20% Similarity=0.316 Sum_probs=207.0
Q ss_pred CCCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCC-CCcceeEeccc
Q 016769 6 PPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS-IGLNKVISQGR 84 (383)
Q Consensus 6 ~~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~s~~~ 84 (383)
+||+|.+-+. |.+-|.+|... +++|+||+.||.+|+|+.. +++...+.+|.. .+.++++... .....|+++|.
T Consensus 94 ~aP~pl~~~~-hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~--~ik~v~~v~~n~~~~~fvsas~ 167 (423)
T KOG0313|consen 94 TAPKPLQCFL-HDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTIVGHTG--PIKSVAWVIKNSSSCLFVSASM 167 (423)
T ss_pred CCCCcccccc-chhhhhhhccc--CceEEEeecCCeeEEEecC-CceEEEEecCCc--ceeeeEEEecCCccceEEEecC
Confidence 4566665544 88999988876 6799999999999999986 555555555543 3444443322 11246899999
Q ss_pred CCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
|.|+++|.++.++.... .++. | .++.. .+.. .+
T Consensus 168 Dqtl~Lw~~~~~~~~~~---~~~~-----~---------------~GHk~-----------------------~V~s-Vs 200 (423)
T KOG0313|consen 168 DQTLRLWKWNVGENKVK---ALKV-----C---------------RGHKR-----------------------SVDS-VS 200 (423)
T ss_pred CceEEEEEecCchhhhh---HHhH-----h---------------ccccc-----------------------ceeE-EE
Confidence 99999999987642110 0000 0 00000 0000 11
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCC--eeeEec----------cCcCCCCCCcCCCCC-ceeeEEEeecCCCCCCce
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAE--RCTRLH----------QNSCGGSPNFSSKGR-GMCMAVQAYLPSKSQGFV 231 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~--~~~~~~----------~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~ 231 (383)
...++. .+++|+.|..+++|+.++.. .+.... +......+...-.+. .-++++ .+.. ..
T Consensus 201 v~~sgt--r~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V-~w~d-----~~ 272 (423)
T KOG0313|consen 201 VDSSGT--RFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSV-VWSD-----AT 272 (423)
T ss_pred ecCCCC--eEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeE-EEcC-----CC
Confidence 123343 45678889999999943321 111110 000000000000111 111222 2332 12
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.+.++++|.+|+.||+.+++. ...+. ...+.++++..+....+++|+.|..|++||-+.+.++.. ...+..|.+-|.
T Consensus 273 v~yS~SwDHTIk~WDletg~~-~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v-~~s~~gH~nwVs 349 (423)
T KOG0313|consen 273 VIYSVSWDHTIKVWDLETGGL-KSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVV-SQSLIGHKNWVS 349 (423)
T ss_pred ceEeecccceEEEEEeecccc-eeeee-cCcceeEeecccccceeeecCCCCceeecCCCCCCCcee-EEeeecchhhhh
Confidence 578999999999999998654 33333 245789999999888899999999999999887766543 344566778899
Q ss_pred EEEECCCCc-EEEEEeCCCcEEEEEcCCCc-eEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 312 GTSIRPDSK-IAATAGWDRRVRIYNYRKGS-ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~~~-~l~s~~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++.++|... .|++++.|+++++||+++.+ +++.+.+|...|.++.|+ ++..+++|+.|++|+++.-.
T Consensus 350 svkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 350 SVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred heecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcceEEEeccc
Confidence 999999765 68999999999999999887 899999999999999996 67899999999999999764
No 33
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.96 E-value=6.6e-27 Score=216.34 Aligned_cols=292 Identities=22% Similarity=0.360 Sum_probs=211.9
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCC-CeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTG-GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D-~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
.++.|.=-..+|..++|+.-|++||-|+.. |.+.||+.....-+.....|. ..+.+++.+| ++..+++|+.|+.|
T Consensus 299 lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~--~~i~~l~YSp--Dgq~iaTG~eDgKV 374 (893)
T KOG0291|consen 299 LIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHS--DRITSLAYSP--DGQLIATGAEDGKV 374 (893)
T ss_pred EEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccc--cceeeEEECC--CCcEEEeccCCCcE
Confidence 445555556789999999999999998887 899999997665555555555 3578899998 57889999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
|+||...+-| ...+.......+ .+ .+...
T Consensus 375 KvWn~~SgfC----------------~vTFteHts~Vt-------------------------------~v----~f~~~ 403 (893)
T KOG0291|consen 375 KVWNTQSGFC----------------FVTFTEHTSGVT-------------------------------AV----QFTAR 403 (893)
T ss_pred EEEeccCceE----------------EEEeccCCCceE-------------------------------EE----EEEec
Confidence 9999987733 222111000000 00 01111
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC-cEEEEeC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG-SILVWDI 247 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg-~i~~wdl 247 (383)
+ ..+.+.+-||+||.||+.....-.++..+. +....|.++. |+ + ..+++|+.|. .|.+|++
T Consensus 404 g--~~llssSLDGtVRAwDlkRYrNfRTft~P~---------p~QfscvavD---~s---G-elV~AG~~d~F~IfvWS~ 465 (893)
T KOG0291|consen 404 G--NVLLSSSLDGTVRAWDLKRYRNFRTFTSPE---------PIQFSCVAVD---PS---G-ELVCAGAQDSFEIFVWSV 465 (893)
T ss_pred C--CEEEEeecCCeEEeeeecccceeeeecCCC---------ceeeeEEEEc---CC---C-CEEEeeccceEEEEEEEe
Confidence 2 234556789999999998887666654321 1122244432 11 1 2466677776 5999999
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW 327 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~ 327 (383)
.++ ..+..+.+|.+||.+++|++.+..+++++.|++|++||+-...+.. .++ .....+..++|+|+|+.+++++.
T Consensus 466 qTG-qllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~v---Etl-~i~sdvl~vsfrPdG~elaVaTl 540 (893)
T KOG0291|consen 466 QTG-QLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTV---ETL-EIRSDVLAVSFRPDGKELAVATL 540 (893)
T ss_pred ecC-eeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCcee---eeE-eeccceeEEEEcCCCCeEEEEEe
Confidence 984 5578899999999999999999999999999999999986543221 111 12356899999999999999999
Q ss_pred CCcEEEEEcCCCceEEEecc--------------------cccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 328 DRRVRIYNYRKGSALAILKY--------------------HHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~--------------------h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
||.|.+||...+.+...+.+ ..+...++++|+||+.+.+|+..+.|.+|++.
T Consensus 541 dgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~ 612 (893)
T KOG0291|consen 541 DGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVP 612 (893)
T ss_pred cceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECc
Confidence 99999999977655433321 12567899999999999999999999999984
No 34
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.96 E-value=1.3e-28 Score=213.03 Aligned_cols=283 Identities=18% Similarity=0.311 Sum_probs=206.2
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCC
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~ 97 (383)
+.+|+.|++.|+|+.|++|+..|-+.+|+...-.....+..|. ..|.++.++. ++.+++||..+|.||+|+.+-..
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHD--s~Vr~m~ws~--~g~wmiSgD~gG~iKyWqpnmnn 171 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHD--SPVRTMKWSH--NGTWMISGDKGGMIKYWQPNMNN 171 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhc--ccceeEEEcc--CCCEEEEcCCCceEEecccchhh
Confidence 4589999999999999999999999999975433333333443 2466677776 47899999999999999975321
Q ss_pred CCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeecc
Q 016769 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAG 177 (383)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 177 (383)
. +..+.| +++..+. .++++...+| ++.
T Consensus 172 V--------k~~~ah---------------------------------------h~eaIRd----lafSpnDskF--~t~ 198 (464)
T KOG0284|consen 172 V--------KIIQAH---------------------------------------HAEAIRD----LAFSPNDSKF--LTC 198 (464)
T ss_pred h--------HHhhHh---------------------------------------hhhhhhe----eccCCCCcee--EEe
Confidence 0 000000 0000000 1233444444 345
Q ss_pred CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeee
Q 016769 178 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 257 (383)
Q Consensus 178 ~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~ 257 (383)
++|++|+|||....+.-..+..+... +.+ ..+.|.. ..+++|+.|..|++||.++ +.++.++
T Consensus 199 SdDg~ikiWdf~~~kee~vL~GHgwd------------Vks-vdWHP~k----gLiasgskDnlVKlWDprS-g~cl~tl 260 (464)
T KOG0284|consen 199 SDDGTIKIWDFRMPKEERVLRGHGWD------------VKS-VDWHPTK----GLIASGSKDNLVKLWDPRS-GSCLATL 260 (464)
T ss_pred cCCCeEEEEeccCCchhheeccCCCC------------cce-eccCCcc----ceeEEccCCceeEeecCCC-cchhhhh
Confidence 67899999999877654444322111 011 1244432 3688999999999999998 4567889
Q ss_pred eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC-cEEEEEeCCCcEEEEEc
Q 016769 258 KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KIAATAGWDRRVRIYNY 336 (383)
Q Consensus 258 ~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-~~l~s~~~dg~i~iwd~ 336 (383)
..|...|..+.|.+.++.|+++|.|..++++|++.... ++ ....|...+.++.++|-. ..|.+|++||.|..|.+
T Consensus 261 h~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkE--l~--~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v 336 (464)
T KOG0284|consen 261 HGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKE--LF--TYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVV 336 (464)
T ss_pred hhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHH--HH--HhhcchhhheeeccccccccceeeccCCCceEEEec
Confidence 99999999999999999999999999999999973321 11 234466679999999854 68999999999999999
Q ss_pred CCCceEEEe-cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 337 RKGSALAIL-KYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 337 ~~~~~~~~~-~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
...+++..+ .+|...|++++|+|-|.+|++|+.|.++++|.=.
T Consensus 337 ~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 337 GLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN 380 (464)
T ss_pred cccccccCCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence 866666544 4799999999999999999999999999999653
No 35
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=2.4e-27 Score=197.94 Aligned_cols=278 Identities=18% Similarity=0.271 Sum_probs=195.2
Q ss_pred ecCCceeeEEEeC-CCCeEEEecCCCeEEEeeCccc-ccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeec
Q 016769 16 GHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQH-RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (383)
Q Consensus 16 gH~~~V~~v~f~~-~~~~L~sgs~D~~v~vW~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~ 93 (383)
.-.+.|.+|+||| ...+|+.||.|++||+|++... ...... .......+..++++. +++.+++|+-|+.+++||+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka-~~~~~~PvL~v~Wsd--dgskVf~g~~Dk~~k~wDL 101 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKA-QQSHDGPVLDVCWSD--DGSKVFSGGCDKQAKLWDL 101 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchh-hhccCCCeEEEEEcc--CCceEEeeccCCceEEEEc
Confidence 4468999999999 5567779999999999999774 322221 123335688888887 4789999999999999999
Q ss_pred CCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCcee
Q 016769 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYM 173 (383)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (383)
+++... .+..+......... + ......+
T Consensus 102 ~S~Q~~-----~v~~Hd~pvkt~~w----------------------------------------------v-~~~~~~c 129 (347)
T KOG0647|consen 102 ASGQVS-----QVAAHDAPVKTCHW----------------------------------------------V-PGMNYQC 129 (347)
T ss_pred cCCCee-----eeeecccceeEEEE----------------------------------------------e-cCCCcce
Confidence 987421 11111000000000 0 0011235
Q ss_pred eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc
Q 016769 174 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 253 (383)
Q Consensus 174 ~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~ 253 (383)
++.|+.|.+||+||++...++.++.-+. +.+++.+. . ..++.+..+..|.+|+|+++...
T Consensus 130 l~TGSWDKTlKfWD~R~~~pv~t~~LPe-----------RvYa~Dv~--~-------pm~vVata~r~i~vynL~n~~te 189 (347)
T KOG0647|consen 130 LVTGSWDKTLKFWDTRSSNPVATLQLPE-----------RVYAADVL--Y-------PMAVVATAERHIAVYNLENPPTE 189 (347)
T ss_pred eEecccccceeecccCCCCeeeeeeccc-----------eeeehhcc--C-------ceeEEEecCCcEEEEEcCCCcch
Confidence 6789999999999999988887775432 33443332 1 13566788999999999875432
Q ss_pred eeeeecc-ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCC--CCeeEEeeeee----c-CCCCeEEEEECCCCcEEEEE
Q 016769 254 LTAMKVH-LEPVLCLSIDESCNGGISGGADQKIVLYNLDHS--TGSCVIKKEIN----L-ERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 254 ~~~~~~h-~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~--~~~~~~~~~~~----~-~~~~i~~~~~~p~~~~l~s~ 325 (383)
.+.++.. ...++|++...+....+.|+..|++.+..++.+ .....++-+-. . .-..|++++|+|....|+++
T Consensus 190 ~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTa 269 (347)
T KOG0647|consen 190 FKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTA 269 (347)
T ss_pred hhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEe
Confidence 2222211 234788888777777899999999999999875 22222222110 0 12357899999999999999
Q ss_pred eCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEe
Q 016769 326 GWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASAS 368 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s 368 (383)
+.||++.+||-+....+++...|..+|.+.+|+.+|.++|.+.
T Consensus 270 GsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA~ 312 (347)
T KOG0647|consen 270 GSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYAL 312 (347)
T ss_pred cCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEEe
Confidence 9999999999998888888889999999999999999998753
No 36
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1.7e-26 Score=190.19 Aligned_cols=290 Identities=20% Similarity=0.271 Sum_probs=202.1
Q ss_pred CCeeeeeecCCceeeEEEeCC-CCeEEEecCCCeEEEeeCcccc---cccccccccccceeeeeeecCCCCcceeEeccc
Q 016769 9 DPVAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHR---TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~-~~~L~sgs~D~~v~vW~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (383)
...+.+.||++.|..+|+||. |..|||||.|+.||+|+...+. |...+. ..+...+.+++++|. +++|+++|.
T Consensus 5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld-~~hkrsVRsvAwsp~--g~~La~aSF 81 (312)
T KOG0645|consen 5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLD-DGHKRSVRSVAWSPH--GRYLASASF 81 (312)
T ss_pred eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEecc-ccchheeeeeeecCC--CcEEEEeec
Confidence 356789999999999999998 8999999999999999987532 222221 123356889999994 689999999
Q ss_pred CCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
|.|+-||.-+.++. -....+.++. ..+.+ .+
T Consensus 82 D~t~~Iw~k~~~ef---------------ecv~~lEGHE------------------------------nEVK~----Va 112 (312)
T KOG0645|consen 82 DATVVIWKKEDGEF---------------ECVATLEGHE------------------------------NEVKC----VA 112 (312)
T ss_pred cceEEEeecCCCce---------------eEEeeeeccc------------------------------cceeE----EE
Confidence 99999998665431 0000000000 00001 12
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCC---eeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCc
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAE---RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS 241 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~ 241 (383)
.+.+| .||+ ..+.|+.|=+|.+..+. ++..++.+. ++..+ ..+.|.. ..|+++++|.+
T Consensus 113 ws~sG-~~LA-TCSRDKSVWiWe~deddEfec~aVL~~Ht---------qDVK~----V~WHPt~----dlL~S~SYDnT 173 (312)
T KOG0645|consen 113 WSASG-NYLA-TCSRDKSVWIWEIDEDDEFECIAVLQEHT---------QDVKH----VIWHPTE----DLLFSCSYDNT 173 (312)
T ss_pred EcCCC-CEEE-EeeCCCeEEEEEecCCCcEEEEeeecccc---------ccccE----EEEcCCc----ceeEEeccCCe
Confidence 33444 3555 45678999999986433 334443221 11111 2355542 36889999999
Q ss_pred EEEEeCCCCC--CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC
Q 016769 242 ILVWDIRNPG--IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319 (383)
Q Consensus 242 i~~wdl~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 319 (383)
||+|+-..+. .+..++.+|..-|.+++|++.+..+++++.|++++||-+-. . ....+...+..+.+. .
T Consensus 174 Ik~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~-----~---~~~~~sr~~Y~v~W~--~ 243 (312)
T KOG0645|consen 174 IKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT-----D---LSGMHSRALYDVPWD--N 243 (312)
T ss_pred EEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeecc-----C---cchhcccceEeeeec--c
Confidence 9999755222 35778999999999999999999999999999999996421 0 111233456777776 4
Q ss_pred cEEEEEeCCCcEEEEEcCCCc--e-----EEEecccccceeEEEEeCC-CCEEEEEeCCCcEEEEeCC
Q 016769 320 KIAATAGWDRRVRIYNYRKGS--A-----LAILKYHHATCNAVSFSSD-CKLMASASEDSTVALWELY 379 (383)
Q Consensus 320 ~~l~s~~~dg~i~iwd~~~~~--~-----~~~~~~h~~~v~~v~~spd-~~~las~s~d~~i~~w~~~ 379 (383)
..|++++.|+.|++|.-...- + .+.-..|...|++|+|.|. ...|++||.||+|++|.+.
T Consensus 244 ~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 244 GVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred cceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 489999999999999775421 1 1233569999999999995 4599999999999999873
No 37
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.96 E-value=5.8e-27 Score=206.16 Aligned_cols=280 Identities=14% Similarity=0.261 Sum_probs=207.2
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCC
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~ 97 (383)
+..|++++++.+|+.||+|+.||.+|+|+.. +..+..+..|. .++.++-+.. .++++++++.|+|+-+||.-++.
T Consensus 235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~-G~l~~tl~~Hk--gPI~slKWnk--~G~yilS~~vD~ttilwd~~~g~ 309 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATGSEDGEARIWNKD-GNLISTLGQHK--GPIFSLKWNK--KGTYILSGGVDGTTILWDAHTGT 309 (524)
T ss_pred cCCcceEEecCCCCeEEEeecCcEEEEEecC-chhhhhhhccC--CceEEEEEcC--CCCEEEeccCCccEEEEeccCce
Confidence 4689999999999999999999999999975 45555554444 4688888876 47899999999999999987764
Q ss_pred CCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeecc
Q 016769 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAG 177 (383)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 177 (383)
.. +. +.+...+. .+.++.. + .. +++.
T Consensus 310 ~~----q~----------f~~~s~~~------------lDVdW~~-------------------------~-~~--F~ts 335 (524)
T KOG0273|consen 310 VK----QQ----------FEFHSAPA------------LDVDWQS-------------------------N-DE--FATS 335 (524)
T ss_pred EE----Ee----------eeeccCCc------------cceEEec-------------------------C-ce--Eeec
Confidence 21 11 11111110 0111100 0 01 2334
Q ss_pred CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeee
Q 016769 178 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 257 (383)
Q Consensus 178 ~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~ 257 (383)
+.++.|+++-+....+..++..+ .+.+.+ ..|.|. ...|++++.|++++||.+... .....+
T Consensus 336 ~td~~i~V~kv~~~~P~~t~~GH----------~g~V~a---lk~n~t----g~LLaS~SdD~TlkiWs~~~~-~~~~~l 397 (524)
T KOG0273|consen 336 STDGCIHVCKVGEDRPVKTFIGH----------HGEVNA---LKWNPT----GSLLASCSDDGTLKIWSMGQS-NSVHDL 397 (524)
T ss_pred CCCceEEEEEecCCCcceeeecc----------cCceEE---EEECCC----CceEEEecCCCeeEeeecCCC-cchhhh
Confidence 55788999888777766666532 122222 124332 236889999999999998764 446778
Q ss_pred eccccCeEEEEEeCCCC---------ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC
Q 016769 258 KVHLEPVLCLSIDESCN---------GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD 328 (383)
Q Consensus 258 ~~h~~~v~~~~~~~~~~---------~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d 328 (383)
++|...|..+.++|.+. .+++++.|.++++||+......+. +..|+..|.+++|+|+++|+|+|+.|
T Consensus 398 ~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~----f~kH~~pVysvafS~~g~ylAsGs~d 473 (524)
T KOG0273|consen 398 QAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHT----LMKHQEPVYSVAFSPNGRYLASGSLD 473 (524)
T ss_pred hhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEe----eccCCCceEEEEecCCCcEEEecCCC
Confidence 89998898888877643 468999999999999986543333 33466789999999999999999999
Q ss_pred CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 329 RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 329 g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
|.|.+|++.+++.++.+++- ..|+.+.|+.+|.+|..+-.|+.+.+-|+.
T Consensus 474 g~V~iws~~~~~l~~s~~~~-~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 474 GCVHIWSTKTGKLVKSYQGT-GGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred CeeEeccccchheeEeecCC-CeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 99999999999999888644 459999999999999999999999999874
No 38
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.96 E-value=3.8e-29 Score=212.23 Aligned_cols=247 Identities=20% Similarity=0.382 Sum_probs=176.2
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEE
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~ 90 (383)
...|.||++.|.|+.| +.+.|+|||.|.+|+|||+.+++++..+..|.. .+.-+.|+. ++++|++.|.++++
T Consensus 230 ~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge~l~tlihHce--aVLhlrf~n----g~mvtcSkDrsiaV 301 (499)
T KOG0281|consen 230 LKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCE--AVLHLRFSN----GYMVTCSKDRSIAV 301 (499)
T ss_pred HHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCchhhHHhhhcc--eeEEEEEeC----CEEEEecCCceeEE
Confidence 4578899999999999 667999999999999999999999988876653 466666664 78999999999999
Q ss_pred eecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCC
Q 016769 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGP 170 (383)
Q Consensus 91 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (383)
||+..+..++ ..+.. .|+. ....+.+ .+.
T Consensus 302 Wdm~sps~it----~rrVL------------------------------vGHr--------------AaVNvVd--fd~- 330 (499)
T KOG0281|consen 302 WDMASPTDIT----LRRVL------------------------------VGHR--------------AAVNVVD--FDD- 330 (499)
T ss_pred EeccCchHHH----HHHHH------------------------------hhhh--------------hheeeec--ccc-
Confidence 9997652110 00000 0000 0000111 122
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCC
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 250 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~ 250 (383)
+| +++++.|++|++|++.+...+..+..+ .++.+.. .+ ....+++|+.|.+|++||+..
T Consensus 331 ky-IVsASgDRTikvW~~st~efvRtl~gH-----------kRGIACl--QY------r~rlvVSGSSDntIRlwdi~~- 389 (499)
T KOG0281|consen 331 KY-IVSASGDRTIKVWSTSTCEFVRTLNGH-----------KRGIACL--QY------RDRLVVSGSSDNTIRLWDIEC- 389 (499)
T ss_pred ce-EEEecCCceEEEEeccceeeehhhhcc-----------cccceeh--hc------cCeEEEecCCCceEEEEeccc-
Confidence 34 456677899999999999887777532 1222211 11 123688999999999999997
Q ss_pred CCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEe-----eeeecCCCCeEEEEECCCCcEEEEE
Q 016769 251 GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIK-----KEINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 251 ~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~-----~~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
+.+++.+++|.+-|.|+.|+.. .+++|+.||.|++||+.......... .....+.+.+..+.| |...+++.
T Consensus 390 G~cLRvLeGHEeLvRciRFd~k--rIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvss 465 (499)
T KOG0281|consen 390 GACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISS 465 (499)
T ss_pred cHHHHHHhchHHhhhheeecCc--eeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEec
Confidence 4568889999999999999864 57999999999999997543221111 112335567777777 55678999
Q ss_pred eCCCcEEEEEcCCCce
Q 016769 326 GWDRRVRIYNYRKGSA 341 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~~ 341 (383)
+-|.+|-|||...+.+
T Consensus 466 sHddtILiWdFl~~~~ 481 (499)
T KOG0281|consen 466 SHDDTILIWDFLNGPP 481 (499)
T ss_pred cCCCeEEEEEcCCCCc
Confidence 9999999999976543
No 39
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=9e-29 Score=211.01 Aligned_cols=286 Identities=20% Similarity=0.349 Sum_probs=198.2
Q ss_pred CCeeeeeecCCceeeEEEeCCC-CeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 9 DPVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~-~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
..++.|.||++.|.|++-+|.. ..+||||.||.|++||+.+..+...+..|.. .+..+++.. +.++++|.|.|
T Consensus 57 PFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G--~V~Gi~v~~----~~~~tvgdDKt 130 (433)
T KOG0268|consen 57 PFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEG--LVRGICVTQ----TSFFTVGDDKT 130 (433)
T ss_pred cchhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccC--ceeeEEecc----cceEEecCCcc
Confidence 3567789999999999999987 7899999999999999998888877665542 344555443 67899999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
|+.|-++.+ +..++. +...+. .+..
T Consensus 131 vK~wk~~~~-----p~~til------g~s~~~--------------------------------------------gIdh 155 (433)
T KOG0268|consen 131 VKQWKIDGP-----PLHTIL------GKSVYL--------------------------------------------GIDH 155 (433)
T ss_pred eeeeeccCC-----cceeee------cccccc--------------------------------------------cccc
Confidence 999998653 111110 000000 0000
Q ss_pred C-CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 168 E-GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 168 ~-~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
. .....+.+|. .|-|||.....++.++.= .++ .+.+ ..|.|..- ..+.+|+.|+.|.|||
T Consensus 156 ~~~~~~FaTcGe---~i~IWD~~R~~Pv~smsw-------G~D---ti~s---vkfNpvET---sILas~~sDrsIvLyD 216 (433)
T KOG0268|consen 156 HRKNSVFATCGE---QIDIWDEQRDNPVSSMSW-------GAD---SISS---VKFNPVET---SILASCASDRSIVLYD 216 (433)
T ss_pred ccccccccccCc---eeeecccccCCccceeec-------CCC---ceeE---EecCCCcc---hheeeeccCCceEEEe
Confidence 0 0011233333 599999988887766642 111 1112 22433321 2366788999999999
Q ss_pred CCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe
Q 016769 247 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG 326 (383)
Q Consensus 247 l~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~ 326 (383)
+++. .|++.... .-.-+.++|+|....+.+++.|..+..+|+........ ....+.+.+.+++|+|.|+-|++||
T Consensus 217 ~R~~-~Pl~KVi~-~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~---v~~dhvsAV~dVdfsptG~Efvsgs 291 (433)
T KOG0268|consen 217 LRQA-SPLKKVIL-TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLN---VHKDHVSAVMDVDFSPTGQEFVSGS 291 (433)
T ss_pred cccC-Cccceeee-eccccceecCccccceeeccccccceehhhhhhcccch---hhcccceeEEEeccCCCcchhcccc
Confidence 9984 44443322 12345789999877889999999999999875432211 1234556788999999999999999
Q ss_pred CCCcEEEEEcCCCceEEEec-ccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 327 WDRRVRIYNYRKGSALAILK-YHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~~-~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.|++||||..+.+.....+- .-...|.+|.||.|.++++|||+|+.|++|...
T Consensus 292 yDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~ 345 (433)
T KOG0268|consen 292 YDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAK 345 (433)
T ss_pred ccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecc
Confidence 99999999998776543320 113468999999999999999999999999753
No 40
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.96 E-value=1.1e-27 Score=222.92 Aligned_cols=237 Identities=20% Similarity=0.313 Sum_probs=178.8
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
...+|.||.++|+.+.|+|+.++|+|+|+|++||+|.+.+..++....+|. ..+..+.|+|. |-+|+|+|.|+|.|
T Consensus 443 ~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~--~PVwdV~F~P~--GyYFatas~D~tAr 518 (707)
T KOG0263|consen 443 TSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHL--APVWDVQFAPR--GYYFATASHDQTAR 518 (707)
T ss_pred eeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCC--cceeeEEecCC--ceEEEecCCCceee
Confidence 345699999999999999999999999999999999999888887766554 45777889884 67899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+|..+.....+
T Consensus 519 LWs~d~~~PlR--------------------------------------------------------------------- 529 (707)
T KOG0263|consen 519 LWSTDHNKPLR--------------------------------------------------------------------- 529 (707)
T ss_pred eeecccCCchh---------------------------------------------------------------------
Confidence 99875421000
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
+.+ |.. +.+. | ..|.|+. ..+++|+.|.+||+||+.+
T Consensus 530 ---ifa-ghl-sDV~-------------------------------c---v~FHPNs----~Y~aTGSsD~tVRlWDv~~ 566 (707)
T KOG0263|consen 530 ---IFA-GHL-SDVD-------------------------------C---VSFHPNS----NYVATGSSDRTVRLWDVST 566 (707)
T ss_pred ---hhc-ccc-cccc-------------------------------e---EEECCcc----cccccCCCCceEEEEEcCC
Confidence 000 000 0000 1 1244443 2577899999999999887
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR 329 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg 329 (383)
+ ..++.+.+|..+|.+++|+|.|.++++|+.|+.|++||+..... ...+..|.+.+.++.|+.+|..||+|+.|.
T Consensus 567 G-~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~----v~~l~~Ht~ti~SlsFS~dg~vLasgg~Dn 641 (707)
T KOG0263|consen 567 G-NSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSL----VKQLKGHTGTIYSLSFSRDGNVLASGGADN 641 (707)
T ss_pred C-cEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcc----hhhhhcccCceeEEEEecCCCEEEecCCCC
Confidence 4 44778899999999999999999999999999999999975432 234455678899999999999999999999
Q ss_pred cEEEEEcCCCc------------------------eEEEecccccceeEEEEeCCCCEEEEE
Q 016769 330 RVRIYNYRKGS------------------------ALAILKYHHATCNAVSFSSDCKLMASA 367 (383)
Q Consensus 330 ~i~iwd~~~~~------------------------~~~~~~~h~~~v~~v~~spd~~~las~ 367 (383)
+|++||+.... .+.++..-..+|..+.|..-+-.|+.|
T Consensus 642 sV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~FtrrNl~L~~g 703 (707)
T KOG0263|consen 642 SVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHFTRRNLLLAVG 703 (707)
T ss_pred eEEEEEchhhcccccccccccccccccccCCCCcceeeeeeecCceEEEEEEeccceeEEec
Confidence 99999995421 233333344577788887655445444
No 41
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.96 E-value=1.1e-26 Score=190.36 Aligned_cols=287 Identities=20% Similarity=0.266 Sum_probs=209.5
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEee
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd 92 (383)
.+++|.+.|.+|+|+.+|..|++|+.|++++||+++..+....+...++...+..+++.+. ....|++++.|.+|++||
T Consensus 15 ~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~-~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 15 ELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPK-HPDLFATASGDKTIRIWD 93 (313)
T ss_pred HhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCC-CCcceEEecCCceEEEEE
Confidence 4679999999999999999999999999999999988766554432223335666777765 357899999999999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
+..+.+. ..+.. + + ..+...++++|. +
T Consensus 94 ~r~~k~~----~~i~~-----------~--------------------~-----------------eni~i~wsp~g~-~ 120 (313)
T KOG1407|consen 94 IRSGKCT----ARIET-----------K--------------------G-----------------ENINITWSPDGE-Y 120 (313)
T ss_pred eccCcEE----EEeec-----------c--------------------C-----------------cceEEEEcCCCC-E
Confidence 9876431 11100 0 0 011223456664 4
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
+++ ++.|..|...|.++.+.....++...+ + ....++.++. ++.....|+|.|-..-+ -.
T Consensus 121 ~~~-~~kdD~it~id~r~~~~~~~~~~~~e~------n----------e~~w~~~nd~--Fflt~GlG~v~ILsyps-Lk 180 (313)
T KOG1407|consen 121 IAV-GNKDDRITFIDARTYKIVNEEQFKFEV------N----------EISWNNSNDL--FFLTNGLGCVEILSYPS-LK 180 (313)
T ss_pred EEE-ecCcccEEEEEecccceeehhccccee------e----------eeeecCCCCE--EEEecCCceEEEEeccc-cc
Confidence 444 455668888898887754443331100 0 0111122222 22334468898887654 45
Q ss_pred ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEE
Q 016769 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVR 332 (383)
Q Consensus 253 ~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~ 332 (383)
++..++.|.....|+.|+|+++++++|+.|..+.+||++..-+.+. +.....+|..++|+.||++||+||.|..|-
T Consensus 181 pv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~----isRldwpVRTlSFS~dg~~lASaSEDh~ID 256 (313)
T KOG1407|consen 181 PVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERC----ISRLDWPVRTLSFSHDGRMLASASEDHFID 256 (313)
T ss_pred cccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhhee----eccccCceEEEEeccCcceeeccCccceEE
Confidence 6788999999999999999999999999999999999975433322 334567899999999999999999999999
Q ss_pred EEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCC---------CcEEEEeC
Q 016769 333 IYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED---------STVALWEL 378 (383)
Q Consensus 333 iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d---------~~i~~w~~ 378 (383)
|=++++|..+..++ +.++.+.|+|+|...+||.+..| |.||+|-+
T Consensus 257 IA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~ 310 (313)
T KOG1407|consen 257 IAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGL 310 (313)
T ss_pred eEecccCCeEEEee-ccCCceeEEecCCCceeeEEecCCCCccccccceeEEecC
Confidence 99999999998885 88899999999999999988776 57787765
No 42
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.96 E-value=9.3e-27 Score=220.41 Aligned_cols=285 Identities=21% Similarity=0.357 Sum_probs=212.4
Q ss_pred CCCCCeeeeee-cCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccc-cccccccceeeeeeecCCCCcceeEecc
Q 016769 6 PPPDPVAVLRG-HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS-SWVHSAAHGIVSVATGPSIGLNKVISQG 83 (383)
Q Consensus 6 ~~~~~~~~l~g-H~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 83 (383)
.+......+.+ |...|.+..|+ ...+++++.|+++++|+..++..+.. +.+|. .++.++++.. ++..+++|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~--g~V~~l~~~~--~~~~lvsgS 268 (537)
T KOG0274|consen 195 LFRRGYKVLLGTDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHF--GGVWGLAFPS--GGDKLVSGS 268 (537)
T ss_pred cccccceeecccCcchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCC--CCceeEEEec--CCCEEEEEe
Confidence 33444556666 56788888888 45899999999999999998887766 65664 4677777764 458999999
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.|.|+|+||+.+|++.. .+..+..-.+ + +
T Consensus 269 ~D~t~rvWd~~sg~C~~----~l~gh~stv~-------------------------------------------~---~- 297 (537)
T KOG0274|consen 269 TDKTERVWDCSTGECTH----SLQGHTSSVR-------------------------------------------C---L- 297 (537)
T ss_pred cCCcEEeEecCCCcEEE----EecCCCceEE-------------------------------------------E---E-
Confidence 99999999999886522 1110000000 0 0
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
.. .+++.++|+.|.+|++|++++++.+..+.. +.+.+.++.. +...+++|+.|++|+
T Consensus 298 ---~~-~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~----------h~~~V~~v~~---------~~~~lvsgs~d~~v~ 354 (537)
T KOG0274|consen 298 ---TI-DPFLLVSGSRDNTVKVWDVTNGACLNLLRG----------HTGPVNCVQL---------DEPLLVSGSYDGTVK 354 (537)
T ss_pred ---Ec-cCceEeeccCCceEEEEeccCcceEEEecc----------ccccEEEEEe---------cCCEEEEEecCceEE
Confidence 00 134567788999999999999998877752 1122333322 123689999999999
Q ss_pred EEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCC-CCeeEEeeeeecCCCCeEEEEECCCCcEE
Q 016769 244 VWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS-TGSCVIKKEINLERPGISGTSIRPDSKIA 322 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~-~~~~~~~~~~~~~~~~i~~~~~~p~~~~l 322 (383)
+||++. ..+++.+++|..+|.++.++.. ..+++|+.|++|++||++.. .+.. .+..+..-+.. +...++++
T Consensus 355 VW~~~~-~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~----tl~~h~~~v~~--l~~~~~~L 426 (537)
T KOG0274|consen 355 VWDPRT-GKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIH----TLQGHTSLVSS--LLLRDNFL 426 (537)
T ss_pred EEEhhh-ceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhh----hhcCCcccccc--ccccccee
Confidence 999996 5678999999999999999876 67899999999999999866 3222 22334334433 34467899
Q ss_pred EEEeCCCcEEEEEcCCCceEEEecc-cccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 323 ATAGWDRRVRIYNYRKGSALAILKY-HHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 323 ~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
++++.|++|++||..+++.+.++.+ |...|.++++. ...+++++.|+.+++||+..
T Consensus 427 vs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~ 483 (537)
T KOG0274|consen 427 VSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRS 483 (537)
T ss_pred EeccccccEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEeccc
Confidence 9999999999999999999999988 67889888876 45799999999999999853
No 43
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.6e-27 Score=203.45 Aligned_cols=254 Identities=19% Similarity=0.313 Sum_probs=185.7
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcc-cccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
...|+||++.|..|+|+..|++|+|+|.|-.+++||..+ .+|+..+.. +.+.+.++.|-|. +..++|++.|.+|+
T Consensus 143 e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~g--h~h~vS~V~f~P~--gd~ilS~srD~tik 218 (406)
T KOG0295|consen 143 ERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIG--HEHGVSSVFFLPL--GDHILSCSRDNTIK 218 (406)
T ss_pred hhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcC--cccceeeEEEEec--CCeeeeccccccee
Confidence 456899999999999999999999999999999999876 345544433 4467888998884 58999999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
.|++.++.+.. .+...+. |. -+.....+|
T Consensus 219 ~We~~tg~cv~----------------t~~~h~e------------wv-----------------------r~v~v~~DG 247 (406)
T KOG0295|consen 219 AWECDTGYCVK----------------TFPGHSE------------WV-----------------------RMVRVNQDG 247 (406)
T ss_pred EEecccceeEE----------------eccCchH------------hE-----------------------EEEEecCCe
Confidence 99999885422 1110000 00 000111222
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEe--ecC------CCCCCceEEEEEeCCCc
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQA--YLP------SKSQGFVNVLAGYEDGS 241 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~sg~~dg~ 241 (383)
.++++++.|.++++|-+.++++...+..+..+ +-|.+... +.| .+.++...+.+++.|++
T Consensus 248 --ti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~----------vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDkt 315 (406)
T KOG0295|consen 248 --TIIASCSNDQTLRVWVVATKQCKAELREHEHP----------VECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKT 315 (406)
T ss_pred --eEEEecCCCceEEEEEeccchhhhhhhccccc----------eEEEEecccccCcchhhccCCCCCccEEEeecccce
Confidence 36778889999999999998543333221111 11111100 000 01123346889999999
Q ss_pred EEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcE
Q 016769 242 ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 321 (383)
Q Consensus 242 i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 321 (383)
||+||+.++ .++-++.+|.+.|..++|+|.|++++++..|+++++||++..+ ++. .+..+..-+++++|+.+..|
T Consensus 316 Ik~wdv~tg-~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~--cmk--~~~ah~hfvt~lDfh~~~p~ 390 (406)
T KOG0295|consen 316 IKIWDVSTG-MCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQ--CMK--TLEAHEHFVTSLDFHKTAPY 390 (406)
T ss_pred EEEEeccCC-eEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccce--eee--ccCCCcceeEEEecCCCCce
Confidence 999999985 4577889999999999999999999999999999999998654 332 33456667999999999999
Q ss_pred EEEEeCCCcEEEEEc
Q 016769 322 AATAGWDRRVRIYNY 336 (383)
Q Consensus 322 l~s~~~dg~i~iwd~ 336 (383)
+++|+-|.++++|..
T Consensus 391 VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 391 VVTGSVDQTVKVWEC 405 (406)
T ss_pred EEeccccceeeeeec
Confidence 999999999999975
No 44
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.96 E-value=1.6e-25 Score=199.51 Aligned_cols=327 Identities=19% Similarity=0.284 Sum_probs=201.6
Q ss_pred Ceeeee---ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccccccc--------------c---------------
Q 016769 10 PVAVLR---GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSS--------------W--------------- 57 (383)
Q Consensus 10 ~~~~l~---gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~--------------~--------------- 57 (383)
.+..|. +|++.|++|+++||++.++|.|+|.++||||+.+..++..+ |
T Consensus 224 ~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in 303 (603)
T KOG0318|consen 224 KVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTIN 303 (603)
T ss_pred EEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEE
Confidence 455666 99999999999999999999999999999998664432211 0
Q ss_pred ------------cccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeecccccc
Q 016769 58 ------------VHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYAN 125 (383)
Q Consensus 58 ------------~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (383)
..++...+.++..++ ++..++||+.||.|.-|+..++..-+. .-..+...........
T Consensus 304 ~ln~~d~~~~~~i~GHnK~ITaLtv~~--d~~~i~SgsyDG~I~~W~~~~g~~~~~---~g~~h~nqI~~~~~~~----- 373 (603)
T KOG0318|consen 304 YLNPSDPSVLKVISGHNKSITALTVSP--DGKTIYSGSYDGHINSWDSGSGTSDRL---AGKGHTNQIKGMAASE----- 373 (603)
T ss_pred EecccCCChhheecccccceeEEEEcC--CCCEEEeeccCceEEEEecCCcccccc---ccccccceEEEEeecC-----
Confidence 001123466677666 458899999999999999988753211 0000000000000000
Q ss_pred ccccCCCCccceeccCcccccCcc---ccccc---cCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEecc
Q 016769 126 AKQANEPKDCYEREVGETVDTDSL---CDSKE---SNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQ 199 (383)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~ 199 (383)
....+.+-+...+..... +..+. ..+.+....+...++. +++++ .....+-+=|. ..+..++
T Consensus 374 ------~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~-~avv~-~~~~iv~l~~~---~~~~~~~- 441 (603)
T KOG0318|consen 374 ------SGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGG-TAVVA-CISDIVLLQDQ---TKVSSIP- 441 (603)
T ss_pred ------CCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCC-EEEEE-ecCcEEEEecC---Ccceeec-
Confidence 000111111000000000 00000 0000111111111111 11111 11112221111 1111111
Q ss_pred CcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC-CceeeeeccccCeEEEEEeCCCCceEE
Q 016769 200 NSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG-IPLTAMKVHLEPVLCLSIDESCNGGIS 278 (383)
Q Consensus 200 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~s 278 (383)
.++.....++.|+. ..++.|++|+.|+||.+.... ..-..+..|..++.+++++|++.++++
T Consensus 442 -------------~~y~~s~vAv~~~~----~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~ 504 (603)
T KOG0318|consen 442 -------------IGYESSAVAVSPDG----SEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAA 504 (603)
T ss_pred -------------cccccceEEEcCCC----CEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEE
Confidence 11212222344443 358889999999999997633 223355679999999999999999999
Q ss_pred EEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCce-EEEecccccceeEEEE
Q 016769 279 GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA-LAILKYHHATCNAVSF 357 (383)
Q Consensus 279 ~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~v~~ 357 (383)
|...+.+.+||...... ....+..|...|++++++|+.+.+|+|+.|-.|.||+++++.. +....+|..-|+.++|
T Consensus 505 ~Da~rkvv~yd~~s~~~---~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~iknAH~~gVn~v~w 581 (603)
T KOG0318|consen 505 GDASRKVVLYDVASREV---KTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAW 581 (603)
T ss_pred eccCCcEEEEEcccCce---ecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEeccccccCceeEEE
Confidence 99999999999976542 3345666788999999999999999999999999999987644 4444579988999999
Q ss_pred eCCCCEEEEEeCCCcEEEEeCC
Q 016769 358 SSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 358 spd~~~las~s~d~~i~~w~~~ 379 (383)
- |...|+|.++|.+||+|++.
T Consensus 582 l-de~tvvSsG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 582 L-DESTVVSSGQDANIKVWNVT 602 (603)
T ss_pred e-cCceEEeccCcceeEEeccc
Confidence 6 66799999999999999984
No 45
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.95 E-value=2.6e-26 Score=212.25 Aligned_cols=292 Identities=19% Similarity=0.355 Sum_probs=219.1
Q ss_pred eeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEe
Q 016769 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~W 91 (383)
..+.||+..|+++||+.+...|+||+ .+.+++|+..+.+|+..+.. ..+.+..|.| +++++++|...|.+.++
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~----~y~l~~~Fvp--gd~~Iv~G~k~Gel~vf 439 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITC----GYILASKFVP--GDRYIVLGTKNGELQVF 439 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEecc----ccEEEEEecC--CCceEEEeccCCceEEE
Confidence 35789999999999999988888764 55899999999998876532 2466778888 67889999999999999
Q ss_pred ecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCc
Q 016769 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPK 171 (383)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (383)
|+....... +++.+. + .....+..+++..
T Consensus 440 dlaS~~l~E----ti~AHd------------------------------g-----------------aIWsi~~~pD~~g 468 (888)
T KOG0306|consen 440 DLASASLVE----TIRAHD------------------------------G-----------------AIWSISLSPDNKG 468 (888)
T ss_pred Eeehhhhhh----hhhccc------------------------------c-----------------ceeeeeecCCCCc
Confidence 997653211 000000 0 0111223455554
Q ss_pred eeeeccCCcceEEEEecCC-------CCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 172 YMAVAGEQLSEVEIWDLNT-------AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~-------~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
+ +.|+.|.+|++||..- .+.+.++.+.. ...-....+|.. ++|+ ...++.+--|.+|++
T Consensus 469 ~--vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~r-----tLel~ddvL~v~---~Spd----gk~LaVsLLdnTVkV 534 (888)
T KOG0306|consen 469 F--VTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTR-----TLELEDDVLCVS---VSPD----GKLLAVSLLDNTVKV 534 (888)
T ss_pred e--EEecCCcEEEEEeEEEEeccCcccceeeeeccce-----EEeccccEEEEE---EcCC----CcEEEEEeccCeEEE
Confidence 4 4456788999999632 11112222110 001122344543 3443 346778889999999
Q ss_pred EeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEE
Q 016769 245 WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 324 (383)
Q Consensus 245 wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s 324 (383)
|-+.+-+. .-.+-+|.=||.||.++++...+++||.|.+|++|-++.+.+.- .+..|+.+|-++.|-|....+.+
T Consensus 535 yflDtlKF-flsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHK----S~fAHdDSvm~V~F~P~~~~FFt 609 (888)
T KOG0306|consen 535 YFLDTLKF-FLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHK----SFFAHDDSVMSVQFLPKTHLFFT 609 (888)
T ss_pred EEecceee-eeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhh----hhhcccCceeEEEEcccceeEEE
Confidence 98887443 34567899999999999999999999999999999998776532 34457788999999999999999
Q ss_pred EeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 325 AGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 325 ~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+|.|++|+-||-+.-+.+..+.+|...|+|++.+|+|.+++|+|.|..|++|.-.+
T Consensus 610 ~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 610 CGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred ecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccC
Confidence 99999999999999999999999999999999999999999999999999998754
No 46
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=3e-26 Score=208.00 Aligned_cols=285 Identities=18% Similarity=0.262 Sum_probs=211.0
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEee
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd 92 (383)
+|..|++.|.+|.|||-.++++++--.|+|.+||-++...+....+.. ..+.+..|.+. -+++++|++|..||+++
T Consensus 8 k~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~--~PvRa~kfiaR--knWiv~GsDD~~IrVfn 83 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSE--VPVRAAKFIAR--KNWIVTGSDDMQIRVFN 83 (794)
T ss_pred HhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecc--cchhhheeeec--cceEEEecCCceEEEEe
Confidence 456699999999999999999999999999999998876665543322 23444444442 37899999999999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
.++++... ..+.++..+. . ....|.. .+
T Consensus 84 ynt~ekV~----~FeAH~DyIR------------------------~-----------------------iavHPt~-P~ 111 (794)
T KOG0276|consen 84 YNTGEKVK----TFEAHSDYIR------------------------S-----------------------IAVHPTL-PY 111 (794)
T ss_pred cccceeeE----Eeecccccee------------------------e-----------------------eeecCCC-Ce
Confidence 98875211 1111100000 0 0011222 23
Q ss_pred eeeccCCcceEEEEecCCCCee-eEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERC-TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
+.++++|-+|++||-+..=.. +.+.. +...+|+.+ |.|.+.+ .+++++-|++|++|.+.++.
T Consensus 112 -vLtsSDDm~iKlW~we~~wa~~qtfeG----------H~HyVMqv~---fnPkD~n---tFaS~sLDrTVKVWslgs~~ 174 (794)
T KOG0276|consen 112 -VLTSSDDMTIKLWDWENEWACEQTFEG----------HEHYVMQVA---FNPKDPN---TFASASLDRTVKVWSLGSPH 174 (794)
T ss_pred -EEecCCccEEEEeeccCceeeeeEEcC----------cceEEEEEE---ecCCCcc---ceeeeeccccEEEEEcCCCC
Confidence 345677899999999876533 33332 122444443 5554333 47899999999999999854
Q ss_pred CceeeeeccccCeEEEEEeC--CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC
Q 016769 252 IPLTAMKVHLEPVLCLSIDE--SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR 329 (383)
Q Consensus 252 ~~~~~~~~h~~~v~~~~~~~--~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg 329 (383)
+..++++|...|+|+.+-+ +..++++|+.|.+|++||.++.++.. .++.|...|+.+.|+|.-..+++|+.||
T Consensus 175 -~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~----TLeGHt~Nvs~v~fhp~lpiiisgsEDG 249 (794)
T KOG0276|consen 175 -PNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQ----TLEGHTNNVSFVFFHPELPIIISGSEDG 249 (794)
T ss_pred -CceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHH----HhhcccccceEEEecCCCcEEEEecCCc
Confidence 5678899999999999944 44589999999999999998765433 3556778899999999999999999999
Q ss_pred cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEE
Q 016769 330 RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVAL 375 (383)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~ 375 (383)
++|||+..+-+...++...-+.++||+-.+.++.++.|.++|.|.+
T Consensus 250 TvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 250 TVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred cEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence 9999999998888888878889999999888889999998887644
No 47
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=9e-26 Score=189.16 Aligned_cols=285 Identities=20% Similarity=0.287 Sum_probs=200.0
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCC
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~ 97 (383)
.+.|.+|.|+|.+..|+.+|+||++|+|++........+ . ..+.+...+|.+ ....++|+.||+||..|++++.
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~-~--~~~plL~c~F~d---~~~~~~G~~dg~vr~~Dln~~~ 86 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKF-K--HGAPLLDCAFAD---ESTIVTGGLDGQVRRYDLNTGN 86 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhe-e--cCCceeeeeccC---CceEEEeccCceEEEEEecCCc
Confidence 688999999999999999999999999999766333332 2 234678888875 4789999999999999998774
Q ss_pred CCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeecc
Q 016769 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAG 177 (383)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 177 (383)
.. .+.++.... ++.. -....+ .+++|
T Consensus 87 ~~-----~igth~~~i-------------------------------------------~ci~---~~~~~~---~vIsg 112 (323)
T KOG1036|consen 87 ED-----QIGTHDEGI-------------------------------------------RCIE---YSYEVG---CVISG 112 (323)
T ss_pred ce-----eeccCCCce-------------------------------------------EEEE---eeccCC---eEEEc
Confidence 21 111110000 0000 000111 35678
Q ss_pred CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeee
Q 016769 178 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 257 (383)
Q Consensus 178 ~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~ 257 (383)
+.|++|++||.+.......+. ....++|+.+. ...++.|+.|..|.+||+++-..+...-
T Consensus 113 sWD~~ik~wD~R~~~~~~~~d-----------~~kkVy~~~v~---------g~~LvVg~~~r~v~iyDLRn~~~~~q~r 172 (323)
T KOG1036|consen 113 SWDKTIKFWDPRNKVVVGTFD-----------QGKKVYCMDVS---------GNRLVVGTSDRKVLIYDLRNLDEPFQRR 172 (323)
T ss_pred ccCccEEEEeccccccccccc-----------cCceEEEEecc---------CCEEEEeecCceEEEEEcccccchhhhc
Confidence 889999999998744433332 22356666542 1258889999999999999865543211
Q ss_pred e-ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCC----CCeeEEeeeeecC-----CCCeEEEEECCCCcEEEEEeC
Q 016769 258 K-VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS----TGSCVIKKEINLE-----RPGISGTSIRPDSKIAATAGW 327 (383)
Q Consensus 258 ~-~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~----~~~~~~~~~~~~~-----~~~i~~~~~~p~~~~l~s~~~ 327 (383)
. .-.-.++|++.-|.+.+++.++.||+|.+-.++.. ..+..++.+-... ...|++++|+|-.++||+|+.
T Consensus 173 eS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGs 252 (323)
T KOG1036|consen 173 ESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGS 252 (323)
T ss_pred cccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCC
Confidence 1 11236788888887778899999999999888765 2222222211111 134899999999999999999
Q ss_pred CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeC-----CCc-------EEEEeCCCCC
Q 016769 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE-----DST-------VALWELYPPH 382 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~-----d~~-------i~~w~~~~~~ 382 (383)
||.|.+||+...+.+..+...+..|.+++|+.||.+||.|+. ..+ |.|.++.+++
T Consensus 253 DG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~sy~ye~~~~~~~~~~~i~I~~l~d~e 319 (323)
T KOG1036|consen 253 DGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASSYQYERADTPTHERNAIFIRDLTDYE 319 (323)
T ss_pred CceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEechhhhcCCCCCCCCCceEEEeccccc
Confidence 999999999999999888777778999999999999999874 223 6666666543
No 48
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=7.5e-26 Score=212.56 Aligned_cols=290 Identities=17% Similarity=0.301 Sum_probs=215.9
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEee
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd 92 (383)
.|+.-+..|-.++|||..++++++--.|+|++||-.=+.++.....|. +.+-.+.|.|. +-.|+|||+|-+|++|+
T Consensus 4 kfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHd--GpVRgv~FH~~--qplFVSGGDDykIkVWn 79 (1202)
T KOG0292|consen 4 KFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHD--GPVRGVDFHPT--QPLFVSGGDDYKIKVWN 79 (1202)
T ss_pred hhhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccC--CccceeeecCC--CCeEEecCCccEEEEEe
Confidence 455667889999999999999999999999999976555565544443 46788999984 57899999999999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
..+.+++- ++- .| ..+. + ...+.+.- .+
T Consensus 80 Yk~rrclf----tL~---GH----------lDYV-----------R-----------------------t~~FHhey-PW 107 (1202)
T KOG0292|consen 80 YKTRRCLF----TLL---GH----------LDYV-----------R-----------------------TVFFHHEY-PW 107 (1202)
T ss_pred cccceehh----hhc---cc----------ccee-----------E-----------------------EeeccCCC-ce
Confidence 97654321 110 01 0000 0 00111222 23
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC---
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN--- 249 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~--- 249 (383)
+.++++|.+||||+..+.++++.+..+ ...+||.. |.|.+ ..+++++-|.+||+||+.-
T Consensus 108 -IlSASDDQTIrIWNwqsr~~iavltGH----------nHYVMcAq---FhptE----DlIVSaSLDQTVRVWDisGLRk 169 (1202)
T KOG0292|consen 108 -ILSASDDQTIRIWNWQSRKCIAVLTGH----------NHYVMCAQ---FHPTE----DLIVSASLDQTVRVWDISGLRK 169 (1202)
T ss_pred -EEEccCCCeEEEEeccCCceEEEEecC----------ceEEEeec---cCCcc----ceEEEecccceEEEEeecchhc
Confidence 445677899999999999999888643 34677754 66643 3689999999999999831
Q ss_pred ----CC---------------------CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee
Q 016769 250 ----PG---------------------IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN 304 (383)
Q Consensus 250 ----~~---------------------~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~ 304 (383)
++ ..-..+.+|...|+-++|+|....++||+.|..|++|.++... . .......
T Consensus 170 k~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetK-a-WEvDtcr 247 (1202)
T KOG0292|consen 170 KNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK-A-WEVDTCR 247 (1202)
T ss_pred cCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecccc-c-eeehhhh
Confidence 11 0012456899999999999999999999999999999886421 1 1112245
Q ss_pred cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 305 LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 305 ~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.|.+.|+++-|+|....++|.|.|++||+||+.+.+.+.+++.-.+.-+.++-+|..+++|.| .|+-+.+|.+.
T Consensus 248 gH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAg-HDsGm~VFkle 321 (1202)
T KOG0292|consen 248 GHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAG-HDSGMIVFKLE 321 (1202)
T ss_pred cccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeee-cCCceEEEEEc
Confidence 577889999999999999999999999999999999999998767778999999999887755 55667777764
No 49
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.95 E-value=4.4e-26 Score=194.36 Aligned_cols=240 Identities=24% Similarity=0.424 Sum_probs=179.5
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+.++++.| +..+|+||+.|+|++|||++++.+.. ++.. | ..
T Consensus 152 gWVr~vavdP--~n~wf~tgs~DrtikIwDlatg~Lkl----tltG---h---------i~------------------- 194 (460)
T KOG0285|consen 152 GWVRSVAVDP--GNEWFATGSADRTIKIWDLATGQLKL----TLTG---H---------IE------------------- 194 (460)
T ss_pred ceEEEEeeCC--CceeEEecCCCceeEEEEcccCeEEE----eecc---h---------hh-------------------
Confidence 4578899998 46899999999999999999985311 1100 0 00
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEee
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAY 222 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 222 (383)
..+... ++ .-..|++.+|. |+.|+.|||+..+.+.....+ -..++|+.+
T Consensus 195 ------------~vr~va----vS-~rHpYlFs~ge-dk~VKCwDLe~nkvIR~YhGH----------lS~V~~L~l--- 243 (460)
T KOG0285|consen 195 ------------TVRGVA----VS-KRHPYLFSAGE-DKQVKCWDLEYNKVIRHYHGH----------LSGVYCLDL--- 243 (460)
T ss_pred ------------eeeeee----ec-ccCceEEEecC-CCeeEEEechhhhhHHHhccc----------cceeEEEec---
Confidence 000000 01 11246776654 789999999998865444321 112344432
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee
Q 016769 223 LPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE 302 (383)
Q Consensus 223 ~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~ 302 (383)
.|. -..+++|+.|.++|+||+|+ +..+..+.+|..+|..+.+.+....+++|+.|.+|++||+........
T Consensus 244 hPT----ldvl~t~grDst~RvWDiRt-r~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~t---- 314 (460)
T KOG0285|consen 244 HPT----LDVLVTGGRDSTIRVWDIRT-RASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMIT---- 314 (460)
T ss_pred ccc----ceeEEecCCcceEEEeeecc-cceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEe----
Confidence 222 23688999999999999998 455788999999999999988778899999999999999975432222
Q ss_pred eecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 303 INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 303 ~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
+..+...+.+++++|....||+++.| .|+-|++..+..+..+.+|..-|++++...|| ++++|+++|.+.+||..+.
T Consensus 315 lt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~~~G~dng~~~fwdwksg 391 (460)
T KOG0285|consen 315 LTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VLVSGGDNGSIMFWDWKSG 391 (460)
T ss_pred eecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCc-eEEEcCCceEEEEEecCcC
Confidence 23345579999999999999999888 48999999999999999999999999998775 7889999999999998654
No 50
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.95 E-value=6.3e-25 Score=182.75 Aligned_cols=249 Identities=20% Similarity=0.332 Sum_probs=180.4
Q ss_pred cccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCcc
Q 016769 56 SWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDC 135 (383)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (383)
+++|. ..+.++.+++ +.++++|+|.||.+-|||--+.. ....+ .-+-.
T Consensus 51 LkGH~--~Ki~~~~ws~--Dsr~ivSaSqDGklIvWDs~Ttn----K~hai-------------pl~s~----------- 98 (343)
T KOG0286|consen 51 LKGHL--NKIYAMDWST--DSRRIVSASQDGKLIVWDSFTTN----KVHAI-------------PLPSS----------- 98 (343)
T ss_pred ecccc--cceeeeEecC--CcCeEEeeccCCeEEEEEccccc----ceeEE-------------ecCce-----------
Confidence 34454 4578888887 56899999999999999975542 01000 00000
Q ss_pred ceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCe--eeEeccCcCCCCCCcCCCCC
Q 016769 136 YEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGR 213 (383)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~--~~~~~~~~~~~s~~~~~~~~ 213 (383)
| .-..+++|.| .+ ++.|+-|+..-||++.+.+. ...... .-..+.+.
T Consensus 99 W-----------------------VMtCA~sPSg-~~-VAcGGLdN~Csiy~ls~~d~~g~~~v~r------~l~gHtgy 147 (343)
T KOG0286|consen 99 W-----------------------VMTCAYSPSG-NF-VACGGLDNKCSIYPLSTRDAEGNVRVSR------ELAGHTGY 147 (343)
T ss_pred e-----------------------EEEEEECCCC-Ce-EEecCcCceeEEEecccccccccceeee------eecCccce
Confidence 0 0001223444 34 45677789999999976521 111110 01112222
Q ss_pred ceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeC-CCCceEEEEcCCcEEEEEccC
Q 016769 214 GMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDH 292 (383)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~s~~~d~~i~~wdl~~ 292 (383)
.-| ..|..+ .++++++.|.+..+||++++ ..+..+.+|...|.++++.| +++.+++|+.|+..++||++.
T Consensus 148 lSc---C~f~dD-----~~ilT~SGD~TCalWDie~g-~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~ 218 (343)
T KOG0286|consen 148 LSC---CRFLDD-----NHILTGSGDMTCALWDIETG-QQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRS 218 (343)
T ss_pred eEE---EEEcCC-----CceEecCCCceEEEEEcccc-eEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccC
Confidence 222 234432 26999999999999999985 45778999999999999999 888999999999999999986
Q ss_pred CCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccc--ccceeEEEEeCCCCEEEEEeCC
Q 016769 293 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HATCNAVSFSSDCKLMASASED 370 (383)
Q Consensus 293 ~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h--~~~v~~v~~spd~~~las~s~d 370 (383)
.... .....|...|+++.|.|+|.-|++|+.|+++|+||++..+.+..++.. ...|++++||-.|++|.+|-.|
T Consensus 219 ~~c~----qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d 294 (343)
T KOG0286|consen 219 GQCV----QTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDD 294 (343)
T ss_pred ccee----EeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecC
Confidence 5432 234567889999999999999999999999999999999988888632 2478999999999999999999
Q ss_pred CcEEEEeCCC
Q 016769 371 STVALWELYP 380 (383)
Q Consensus 371 ~~i~~w~~~~ 380 (383)
.++.+||...
T Consensus 295 ~~c~vWDtlk 304 (343)
T KOG0286|consen 295 FTCNVWDTLK 304 (343)
T ss_pred CceeEeeccc
Confidence 9999999753
No 51
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=7.6e-26 Score=205.34 Aligned_cols=240 Identities=20% Similarity=0.318 Sum_probs=188.2
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+.++.+.|. .-+++++=..|.+.+||.++..+.+ .++....|.
T Consensus 14 dRVKsVd~HPt--ePw~la~LynG~V~IWnyetqtmVk--------------sfeV~~~Pv------------------- 58 (794)
T KOG0276|consen 14 DRVKSVDFHPT--EPWILAALYNGDVQIWNYETQTMVK--------------SFEVSEVPV------------------- 58 (794)
T ss_pred CceeeeecCCC--CceEEEeeecCeeEEEecccceeee--------------eeeecccch-------------------
Confidence 45788999884 4688888889999999998763211 011111010
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEee
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAY 222 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 222 (383)
+.-.++ .++..+++|++|..||+++..+...+..+.. +++.+-|+++.+.
T Consensus 59 --------------Ra~kfi------aRknWiv~GsDD~~IrVfnynt~ekV~~FeA----------H~DyIR~iavHPt 108 (794)
T KOG0276|consen 59 --------------RAAKFI------ARKNWIVTGSDDMQIRVFNYNTGEKVKTFEA----------HSDYIRSIAVHPT 108 (794)
T ss_pred --------------hhheee------eccceEEEecCCceEEEEecccceeeEEeec----------cccceeeeeecCC
Confidence 000111 1233456788899999999999998888864 3345666666543
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEee
Q 016769 223 LPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKK 301 (383)
Q Consensus 223 ~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~ 301 (383)
.| .+++++.|-+|++||.++.=.+..++.+|...|.+++|.|... .+++++-|++|++|.+..+....
T Consensus 109 ~P-------~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nf---- 177 (794)
T KOG0276|consen 109 LP-------YVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNF---- 177 (794)
T ss_pred CC-------eEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCce----
Confidence 33 5899999999999999876556778999999999999988654 68999999999999998665443
Q ss_pred eeecCCCCeEEEEECCC--CcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 302 EINLERPGISGTSIRPD--SKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 302 ~~~~~~~~i~~~~~~p~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.++.|..+|+++.|-+. ..|+++|+.|.+|++||..+..++.++.||...|..+.|+|.-++++|||+||+||||+-
T Consensus 178 Tl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs 256 (794)
T KOG0276|consen 178 TLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNS 256 (794)
T ss_pred eeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecC
Confidence 34567889999999654 479999999999999999999999999999999999999999999999999999999975
No 52
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=2.1e-25 Score=209.46 Aligned_cols=188 Identities=22% Similarity=0.312 Sum_probs=139.6
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
++.+++.|.+||||++...++++.+.++. .+-|+ +|.|.+ ..++++|+-|+.||||+|-...
T Consensus 382 fLLSSSMDKTVRLWh~~~~~CL~~F~Hnd-----------fVTcV---aFnPvD---DryFiSGSLD~KvRiWsI~d~~- 443 (712)
T KOG0283|consen 382 FLLSSSMDKTVRLWHPGRKECLKVFSHND-----------FVTCV---AFNPVD---DRYFISGSLDGKVRLWSISDKK- 443 (712)
T ss_pred eeEeccccccEEeecCCCcceeeEEecCC-----------eeEEE---EecccC---CCcEeecccccceEEeecCcCe-
Confidence 44556789999999999999998886542 22232 366653 2368999999999999987533
Q ss_pred ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeee------ecCCCCeEEEEECCCCc-EEEEE
Q 016769 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI------NLERPGISGTSIRPDSK-IAATA 325 (383)
Q Consensus 253 ~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~------~~~~~~i~~~~~~p~~~-~l~s~ 325 (383)
.......+ +.|+.++|.|+|++.+.|+.+|.+++|+...-. ......+ +.....|+++.|.|... .|+.+
T Consensus 444 Vv~W~Dl~-~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk--~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVT 520 (712)
T KOG0283|consen 444 VVDWNDLR-DLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLK--LVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVT 520 (712)
T ss_pred eEeehhhh-hhheeEEeccCCceEEEEEeccEEEEEEccCCe--EEEeeeEeeccCccccCceeeeeEecCCCCCeEEEe
Confidence 22222222 689999999999999999999999999875421 1111111 11123699999987654 46678
Q ss_pred eCCCcEEEEEcCCCceEEEecccccce--eEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 326 GWDRRVRIYNYRKGSALAILKYHHATC--NAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~~~~~~~~h~~~v--~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
+.|.+|||||+++.+.+..++|+.+.- ....|++||+++++|++|..|++|++..+
T Consensus 521 SnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 521 SNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred cCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCCC
Confidence 999999999998888887787765432 45689999999999999999999998543
No 53
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=3.5e-25 Score=180.85 Aligned_cols=285 Identities=18% Similarity=0.332 Sum_probs=196.6
Q ss_pred eeEEEeCC--CCe-EEEec-----CCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeec
Q 016769 22 TDVCFHQT--KPI-LFAGT-----TGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (383)
Q Consensus 22 ~~v~f~~~--~~~-L~sgs-----~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~ 93 (383)
+++.|||- +++ +|++. ..|++.|-++...+.+..........++.-++++++ ..+++++++.||++|+||.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~-~e~~~~~a~GDGSLrl~d~ 90 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSEN-HENQVIAASGDGSLRLFDL 90 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCC-CcceEEEEecCceEEEecc
Confidence 56789983 332 23322 346788888764444443332223345677888875 4578999999999999995
Q ss_pred CCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCcee
Q 016769 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYM 173 (383)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (383)
..+. .|....+.+. ..++.+.++. .. +..
T Consensus 91 ~~~s---~Pi~~~kEH~----------------------~EV~Svdwn~-------------------------~~-r~~ 119 (311)
T KOG0277|consen 91 TMPS---KPIHKFKEHK----------------------REVYSVDWNT-------------------------VR-RRI 119 (311)
T ss_pred CCCC---cchhHHHhhh----------------------hheEEecccc-------------------------cc-cee
Confidence 3221 1211111100 0111111111 11 223
Q ss_pred eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc
Q 016769 174 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 253 (383)
Q Consensus 174 ~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~ 253 (383)
.++++.|++||+||...++.++++..+ -.|+....+.|... ..+++++.|+++++||++.++..
T Consensus 120 ~ltsSWD~TiKLW~~~r~~Sv~Tf~gh-------------~~~Iy~a~~sp~~~---nlfas~Sgd~~l~lwdvr~~gk~ 183 (311)
T KOG0277|consen 120 FLTSSWDGTIKLWDPNRPNSVQTFNGH-------------NSCIYQAAFSPHIP---NLFASASGDGTLRLWDVRSPGKF 183 (311)
T ss_pred EEeeccCCceEeecCCCCcceEeecCC-------------ccEEEEEecCCCCC---CeEEEccCCceEEEEEecCCCce
Confidence 445588999999999988888876532 12333334555432 25778999999999999998776
Q ss_pred eeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC-cEEEEEeCCCcE
Q 016769 254 LTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KIAATAGWDRRV 331 (383)
Q Consensus 254 ~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-~~l~s~~~dg~i 331 (383)
+. +..|...+.++.|+.... .+++|+.|+.|+.||++..... ..++..+...|..+.|+|-. ..||+++.|-++
T Consensus 184 ~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~p---l~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~ 259 (311)
T KOG0277|consen 184 MS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTP---LFELNGHGLAVRKVKFSPHHASLLASASYDMTV 259 (311)
T ss_pred eE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhcccc---ceeecCCceEEEEEecCcchhhHhhhccccceE
Confidence 55 888998899999976544 5789999999999999865422 13456677789999999975 579999999999
Q ss_pred EEEEcCCCc-eEEEecccccceeEEEEeCC-CCEEEEEeCCCcEEEEeC
Q 016769 332 RIYNYRKGS-ALAILKYHHATCNAVSFSSD-CKLMASASEDSTVALWEL 378 (383)
Q Consensus 332 ~iwd~~~~~-~~~~~~~h~~~v~~v~~spd-~~~las~s~d~~i~~w~~ 378 (383)
||||...+. .+.+...|.+-+..+.||+- ..++|+.+.|..++||+-
T Consensus 260 riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 260 RIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred EecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 999998654 45677789999999999984 459999999999999984
No 54
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=7.3e-25 Score=184.39 Aligned_cols=303 Identities=21% Similarity=0.312 Sum_probs=191.1
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcc-----cccccccccccccceeeeeeecCCCCcceeEecccC
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-----HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
+.+|+||.+.|++|+|+.||++|+|++.|++||||++.. .+++.. .++. .+ -..+.|.|+- ...+++.-.-
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~-nve~-dh-pT~V~FapDc-~s~vv~~~~g 154 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQ-NVEY-DH-PTRVVFAPDC-KSVVVSVKRG 154 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhc-cccC-CC-ceEEEECCCc-ceEEEEEccC
Confidence 357999999999999999999999999999999999753 233321 1111 11 2466777741 2345566677
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
.+++++-+...+-...+. ...+....++.... ...+...
T Consensus 155 ~~l~vyk~~K~~dG~~~~-----~~v~~D~~~f~~kh------------------------------------~v~~i~i 193 (420)
T KOG2096|consen 155 NKLCVYKLVKKTDGSGSH-----HFVHIDNLEFERKH------------------------------------QVDIINI 193 (420)
T ss_pred CEEEEEEeeecccCCCCc-----ccccccccccchhc------------------------------------ccceEEE
Confidence 788888764322111000 00000000000000 0000111
Q ss_pred C-CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 166 P-AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 166 ~-~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
. .++.+|++ +.+.|.+|-||++. ++.+..+.-+.. . ..++ ..+|+ + .++++++-.-.|++
T Consensus 194 GiA~~~k~im-sas~dt~i~lw~lk-Gq~L~~idtnq~-------~--n~~a----avSP~---G-RFia~~gFTpDVkV 254 (420)
T KOG2096|consen 194 GIAGNAKYIM-SASLDTKICLWDLK-GQLLQSIDTNQS-------S--NYDA----AVSPD---G-RFIAVSGFTPDVKV 254 (420)
T ss_pred eecCCceEEE-EecCCCcEEEEecC-Cceeeeeccccc-------c--ccce----eeCCC---C-cEEEEecCCCCceE
Confidence 1 23335554 44567799999998 776665542110 0 0111 23333 2 24667777788999
Q ss_pred EeCCC--CC-----CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCC----CeeEEeee---eecCCCCe
Q 016769 245 WDIRN--PG-----IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST----GSCVIKKE---INLERPGI 310 (383)
Q Consensus 245 wdl~~--~~-----~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~----~~~~~~~~---~~~~~~~i 310 (383)
|.+-- .+ ...-.+++|...|..++|+++....++.+.||.+++||.+-.- .+-+++.. +....+..
T Consensus 255 wE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p 334 (420)
T KOG2096|consen 255 WEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEP 334 (420)
T ss_pred EEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCc
Confidence 98621 11 1133578999999999999999999999999999999986321 11111110 11112334
Q ss_pred EEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEec-ccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 311 SGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK-YHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
..++++|+|+.||. +....+++|..++++.+.++. .|...|.+++|+|||+++||++ |..+++.--.
T Consensus 335 ~RL~lsP~g~~lA~-s~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~nt 402 (420)
T KOG2096|consen 335 VRLELSPSGDSLAV-SFGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIRNT 402 (420)
T ss_pred eEEEeCCCCcEEEe-ecCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeecCC
Confidence 57889999998875 456789999999999887764 5999999999999999999987 5677777543
No 55
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=4.9e-25 Score=185.37 Aligned_cols=332 Identities=17% Similarity=0.242 Sum_probs=217.8
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
.+..|.||++.|+.++.....+.+.|+|+|.+.++|.+++++|+....+|. +.+-++.|.++ +..+++++.|++..
T Consensus 140 lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~--GSVNsikfh~s--~~L~lTaSGD~taH 215 (481)
T KOG0300|consen 140 LVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHT--GSVNSIKFHNS--GLLLLTASGDETAH 215 (481)
T ss_pred ehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccc--cceeeEEeccc--cceEEEccCCcchH
Confidence 344578999999999998888899999999999999999999998887765 46778899884 56778999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEe--eccccccccccCCCCccceeccCcccccCccccccccCCccceecccC-
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSL--VKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP- 166 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 166 (383)
||...-.-. .|...... .|.-.-+. ...... ....+ ....++.+.. .+.... ++..++..+.
T Consensus 216 IW~~av~~~--vP~~~a~~--~hSsEeE~e~sDe~~~--d~d~~-----~~sD~~tiRv-Pl~~lt---gH~~vV~a~dW 280 (481)
T KOG0300|consen 216 IWKAAVNWE--VPSNNAPS--DHSSEEEEEHSDEHNR--DTDSS-----EKSDGHTIRV-PLMRLT---GHRAVVSACDW 280 (481)
T ss_pred HHHHhhcCc--CCCCCCCC--CCCchhhhhccccccc--ccccc-----cccCCceeee-eeeeee---ccccceEehhh
Confidence 998321100 00000000 00000000 000000 00000 0000000000 000000 1111222211
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
..|.+. ++.++.|++..+||++++..+..+..+... +. .|.. +.....+++.+.|.+.++||
T Consensus 281 L~gg~Q-~vTaSWDRTAnlwDVEtge~v~~LtGHd~E--Lt-------Hcst--------HptQrLVvTsSrDtTFRLWD 342 (481)
T KOG0300|consen 281 LAGGQQ-MVTASWDRTANLWDVETGEVVNILTGHDSE--LT-------HCST--------HPTQRLVVTSSRDTTFRLWD 342 (481)
T ss_pred hcCcce-eeeeeccccceeeeeccCceeccccCcchh--cc-------cccc--------CCcceEEEEeccCceeEecc
Confidence 122333 345678999999999999987776542210 11 1111 12234678899999999999
Q ss_pred CCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe
Q 016769 247 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG 326 (383)
Q Consensus 247 l~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~ 326 (383)
++........+++|++.|.+..|..+. .+++|+.|.+|++|||....... . .+. ..+.++.++++..++.||.--
T Consensus 343 FReaI~sV~VFQGHtdtVTS~vF~~dd-~vVSgSDDrTvKvWdLrNMRspl-A--TIR-tdS~~NRvavs~g~~iIAiPh 417 (481)
T KOG0300|consen 343 FREAIQSVAVFQGHTDTVTSVVFNTDD-RVVSGSDDRTVKVWDLRNMRSPL-A--TIR-TDSPANRVAVSKGHPIIAIPH 417 (481)
T ss_pred chhhcceeeeecccccceeEEEEecCC-ceeecCCCceEEEeeeccccCcc-e--eee-cCCccceeEeecCCceEEecc
Confidence 996555578899999999999997664 46899999999999998654321 1 122 235788999999999999999
Q ss_pred CCCcEEEEEcCCCceE----EEecccccceeEEEEeCCCC--EEEEEeCCCcEEEEeCCCCCC
Q 016769 327 WDRRVRIYNYRKGSAL----AILKYHHATCNAVSFSSDCK--LMASASEDSTVALWELYPPHA 383 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~----~~~~~h~~~v~~v~~spd~~--~las~s~d~~i~~w~~~~~~~ 383 (383)
.++.|++||+.-.+.. ..-++|...|.|.+|.-+-. -|++++.|..+.=|++..|+.
T Consensus 418 DNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~~ 480 (481)
T KOG0300|consen 418 DNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPTS 480 (481)
T ss_pred CCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEecccCC
Confidence 9999999999643321 23468999999999975433 588999999999999988763
No 56
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.94 E-value=1.1e-24 Score=200.16 Aligned_cols=283 Identities=19% Similarity=0.323 Sum_probs=195.8
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeee-eeecCCCCcceeEecccCCe
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS-VATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~s~~~D~t 87 (383)
+..+.++||...|..+++.+.. .++++|.||++++|+-...+-+.......+...+.. +++.+. +..++++|+.|.+
T Consensus 5 ~ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~-~~~~l~~g~~D~~ 82 (745)
T KOG0301|consen 5 KLSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAES-DKGRLVVGGMDTT 82 (745)
T ss_pred eeEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCcccccceecccCcceeeccceeccc-cCcceEeecccce
Confidence 4567899999999999987554 899999999999999755443322111112222322 444432 4467899999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
+.+|...+.+ |..++..+....|.++.
T Consensus 83 i~v~~~~~~~----P~~~LkgH~snVC~ls~------------------------------------------------- 109 (745)
T KOG0301|consen 83 IIVFKLSQAE----PLYTLKGHKSNVCSLSI------------------------------------------------- 109 (745)
T ss_pred EEEEecCCCC----chhhhhccccceeeeec-------------------------------------------------
Confidence 9999987653 23333333332332221
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
+..-.+++|+.|.++++|.+.... ..++.+ ...+ -++ ...|++ .+++|+.|++||+|.=
T Consensus 110 -~~~~~~iSgSWD~TakvW~~~~l~--~~l~gH----------~asV--WAv-~~l~e~-----~~vTgsaDKtIklWk~ 168 (745)
T KOG0301|consen 110 -GEDGTLISGSWDSTAKVWRIGELV--YSLQGH----------TASV--WAV-ASLPEN-----TYVTGSADKTIKLWKG 168 (745)
T ss_pred -CCcCceEecccccceEEecchhhh--cccCCc----------chhe--eee-eecCCC-----cEEeccCcceeeeccC
Confidence 111135688999999999764422 222211 0001 111 233332 4889999999999973
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW 327 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~ 327 (383)
+..+.++++|++.|+.+++-++. .++||+.||.|++|+++. .+++ ++..|.+-+.+++...+++.+++++.
T Consensus 169 ---~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~g---e~l~--~~~ghtn~vYsis~~~~~~~Ivs~gE 239 (745)
T KOG0301|consen 169 ---GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLDG---EVLL--EMHGHTNFVYSISMALSDGLIVSTGE 239 (745)
T ss_pred ---CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEeccC---ceee--eeeccceEEEEEEecCCCCeEEEecC
Confidence 44578899999999999996653 579999999999999842 2333 45667778999997788889999999
Q ss_pred CCcEEEEEcCCCceEEEeccccc-ceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 328 DRRVRIYNYRKGSALAILKYHHA-TCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~-~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
|++++||+.. .+...+. |+. .|+++.+-++|. +++|+.||.|+||...+
T Consensus 240 DrtlriW~~~--e~~q~I~-lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 240 DRTLRIWKKD--ECVQVIT-LPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDK 289 (745)
T ss_pred CceEEEeecC--ceEEEEe-cCccceEEEEEeeCCC-EEEeccCceEEEEEecc
Confidence 9999999997 5555554 444 799999887775 57789999999998763
No 57
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1.5e-23 Score=176.57 Aligned_cols=290 Identities=17% Similarity=0.225 Sum_probs=195.3
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecc--cCC
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG--RDG 86 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~--~D~ 86 (383)
+|.++|+.-.+.|++|.|+++|..|+++++|.+++|||..+++.+..+..+ ..++-.+.|.. ..+.++.++ .|.
T Consensus 5 ~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~sk--kyG~~~~~Fth--~~~~~i~sStk~d~ 80 (311)
T KOG1446|consen 5 RPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSK--KYGVDLACFTH--HSNTVIHSSTKEDD 80 (311)
T ss_pred ccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecc--cccccEEEEec--CCceEEEccCCCCC
Confidence 456677777899999999999999999999999999999998877765433 23455555543 235566555 489
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
+||.-++.+.++++ - ..++.. . +. .....
T Consensus 81 tIryLsl~dNkylR-------Y----------F~GH~~----------~-----------------------V~-sL~~s 109 (311)
T KOG1446|consen 81 TIRYLSLHDNKYLR-------Y----------FPGHKK----------R-----------------------VN-SLSVS 109 (311)
T ss_pred ceEEEEeecCceEE-------E----------cCCCCc----------e-----------------------EE-EEEec
Confidence 99999987764321 0 000000 0 00 01111
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
|.+. ...+++.|++||+||++..++.-.+.-.. +.. .+|-|++ ..++++.....|++||
T Consensus 110 P~~d--~FlS~S~D~tvrLWDlR~~~cqg~l~~~~-----------~pi----~AfDp~G----LifA~~~~~~~IkLyD 168 (311)
T KOG1446|consen 110 PKDD--TFLSSSLDKTVRLWDLRVKKCQGLLNLSG-----------RPI----AAFDPEG----LIFALANGSELIKLYD 168 (311)
T ss_pred CCCC--eEEecccCCeEEeeEecCCCCceEEecCC-----------Ccc----eeECCCC----cEEEEecCCCeEEEEE
Confidence 2222 34567788999999999877654443211 111 1233321 1234455555999999
Q ss_pred CCCC-CCceeeeecc---ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCC-eEEEEECCCCcE
Q 016769 247 IRNP-GIPLTAMKVH---LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG-ISGTSIRPDSKI 321 (383)
Q Consensus 247 l~~~-~~~~~~~~~h---~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~-i~~~~~~p~~~~ 321 (383)
+|+- +.|...+... ......+.|+++|+.++.+...+.+.+.|.=.++ ............. --...|+||+++
T Consensus 169 ~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~--~~~tfs~~~~~~~~~~~a~ftPds~F 246 (311)
T KOG1446|consen 169 LRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGT--VKSTFSGYPNAGNLPLSATFTPDSKF 246 (311)
T ss_pred ecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCc--EeeeEeeccCCCCcceeEEECCCCcE
Confidence 9874 3355544432 3456789999999999988888888888754333 3322222222221 246789999999
Q ss_pred EEEEeCCCcEEEEEcCCCceEEEecc-cccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 322 AATAGWDRRVRIYNYRKGSALAILKY-HHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 322 l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+++|+.||+|.+|++++++.+..+++ +..++.++.|+|.--++||+ +..+-+|=.
T Consensus 247 vl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa--~s~l~fw~p 302 (311)
T KOG1446|consen 247 VLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSA--SSNLVFWLP 302 (311)
T ss_pred EEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeec--CceEEEEec
Confidence 99999999999999999999999988 78999999999975566655 466888844
No 58
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.93 E-value=4.7e-25 Score=185.98 Aligned_cols=287 Identities=16% Similarity=0.241 Sum_probs=205.8
Q ss_pred ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccc------cccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH------SAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
|.+.-+-|..|+|||++|+|||.||-|.|||..+++.-..++-- .....+.|+.|+- +.+.+++|+.||.|+
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSR--DsEMlAsGsqDGkIK 288 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSR--DSEMLASGSQDGKIK 288 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecc--cHHHhhccCcCCcEE
Confidence 55677888999999999999999999999999887643322100 1123477888876 568899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+|.+++|.|++.-. +.+.-..+. ..++.++
T Consensus 289 vWri~tG~ClRrFd---rAHtkGvt~-----------------------------------------------l~FSrD~ 318 (508)
T KOG0275|consen 289 VWRIETGQCLRRFD---RAHTKGVTC-----------------------------------------------LSFSRDN 318 (508)
T ss_pred EEEEecchHHHHhh---hhhccCeeE-----------------------------------------------EEEccCc
Confidence 99999997654210 000000000 1122333
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
.++ .+++.|.++|+.-+.+++++..+..+.. +-+. ..|.++. .++++++.||+|++|+.++
T Consensus 319 Sqi--LS~sfD~tvRiHGlKSGK~LKEfrGHsS-----yvn~--------a~ft~dG----~~iisaSsDgtvkvW~~Kt 379 (508)
T KOG0275|consen 319 SQI--LSASFDQTVRIHGLKSGKCLKEFRGHSS-----YVNE--------ATFTDDG----HHIISASSDGTVKVWHGKT 379 (508)
T ss_pred chh--hcccccceEEEeccccchhHHHhcCccc-----cccc--------eEEcCCC----CeEEEecCCccEEEecCcc
Confidence 332 3456788999999999998877664321 1000 0133222 3689999999999999887
Q ss_pred CCCceeeeec--cccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEee-eeecCCCCeEEEEECCCCcEEEEE
Q 016769 250 PGIPLTAMKV--HLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKK-EINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 250 ~~~~~~~~~~--h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~-~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
..++.+++. ...+|+.+-.-|... .++.|...+++.+-++... ..... .-+.+.+..-+..++|-|..+.+.
T Consensus 380 -teC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQ---vVrsfsSGkREgGdFi~~~lSpkGewiYci 455 (508)
T KOG0275|consen 380 -TECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQ---VVRSFSSGKREGGDFINAILSPKGEWIYCI 455 (508)
T ss_pred -hhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccce---EEeeeccCCccCCceEEEEecCCCcEEEEE
Confidence 344555543 234677776655443 5788999999999887532 11111 123345567788899999999999
Q ss_pred eCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 326 GWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
+.|+.++-|...+|+...++.-|++.+..++-+|-.+.||+-++||.+++|.
T Consensus 456 gED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 456 GEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred ccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 9999999999999999999999999999999999999999999999999995
No 59
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1.1e-24 Score=204.69 Aligned_cols=247 Identities=17% Similarity=0.325 Sum_probs=186.2
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+..++|.|+ .-+++++=-.|+|++||..=+.++.. +.
T Consensus 10 sRvKglsFHP~--rPwILtslHsG~IQlWDYRM~tli~r--------------Fd------------------------- 48 (1202)
T KOG0292|consen 10 SRVKGLSFHPK--RPWILTSLHSGVIQLWDYRMGTLIDR--------------FD------------------------- 48 (1202)
T ss_pred ccccceecCCC--CCEEEEeecCceeeeehhhhhhHHhh--------------hh-------------------------
Confidence 45778899985 46788888889999999864422110 00
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEee
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAY 222 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 222 (383)
.+.++++. ..+.+.+ .++++|++|-+|++|+..+.+++.++..+. +.+-. + .|
T Consensus 49 --------eHdGpVRg----v~FH~~q--plFVSGGDDykIkVWnYk~rrclftL~GHl----------DYVRt--~-~F 101 (1202)
T KOG0292|consen 49 --------EHDGPVRG----VDFHPTQ--PLFVSGGDDYKIKVWNYKTRRCLFTLLGHL----------DYVRT--V-FF 101 (1202)
T ss_pred --------ccCCccce----eeecCCC--CeEEecCCccEEEEEecccceehhhhcccc----------ceeEE--e-ec
Confidence 00000010 1123333 377889999999999999988887765421 11111 1 13
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCC------C-
Q 016769 223 LPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST------G- 295 (383)
Q Consensus 223 ~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~------~- 295 (383)
.+. ..++++++.|.+|+||+..+ +.++..+++|...|.|..|+|+.+.++|+|-|++|++||+..-. +
T Consensus 102 Hhe----yPWIlSASDDQTIrIWNwqs-r~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~ 176 (1202)
T KOG0292|consen 102 HHE----YPWILSASDDQTIRIWNWQS-RKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGS 176 (1202)
T ss_pred cCC----CceEEEccCCCeEEEEeccC-CceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCC
Confidence 322 23699999999999999987 56789999999999999999998999999999999999984210 0
Q ss_pred ------------------eeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCce--EEEecccccceeEE
Q 016769 296 ------------------SCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA--LAILKYHHATCNAV 355 (383)
Q Consensus 296 ------------------~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~v 355 (383)
....+..++.|.-+|++++|+|.-..|+||+.|+.|++|.+...+. +-+.++|.+.|.++
T Consensus 177 ~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssv 256 (1202)
T KOG0292|consen 177 LEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSV 256 (1202)
T ss_pred chhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceE
Confidence 1233345677888999999999999999999999999999965553 45788999999999
Q ss_pred EEeCCCCEEEEEeCCCcEEEEeCCCCC
Q 016769 356 SFSSDCKLMASASEDSTVALWELYPPH 382 (383)
Q Consensus 356 ~~spd~~~las~s~d~~i~~w~~~~~~ 382 (383)
-|+|...++.|.|+|+.|++||+...+
T Consensus 257 lfhp~q~lIlSnsEDksirVwDm~kRt 283 (1202)
T KOG0292|consen 257 LFHPHQDLILSNSEDKSIRVWDMTKRT 283 (1202)
T ss_pred EecCccceeEecCCCccEEEEeccccc
Confidence 999998999999999999999997654
No 60
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.93 E-value=2.2e-24 Score=204.34 Aligned_cols=253 Identities=24% Similarity=0.364 Sum_probs=182.8
Q ss_pred eee-eeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 11 VAV-LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 11 ~~~-l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
+.+ |.||++.|++++|..-+.+|++||.|.++||||..++.|...+..|.. .+.++...+ ..+++|+.|.+|+
T Consensus 241 i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~s--tv~~~~~~~----~~~~sgs~D~tVk 314 (537)
T KOG0274|consen 241 ILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTS--SVRCLTIDP----FLLVSGSRDNTVK 314 (537)
T ss_pred EEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCc--eEEEEEccC----ceEeeccCCceEE
Confidence 345 899999999999987788999999999999999999999988876652 355555543 5778899999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+|+++++.+.. .+ ..+.. + +....-++
T Consensus 315 VW~v~n~~~l~----l~-------------~~h~~-------~-----------------------------V~~v~~~~ 341 (537)
T KOG0274|consen 315 VWDVTNGACLN----LL-------------RGHTG-------P-----------------------------VNCVQLDE 341 (537)
T ss_pred EEeccCcceEE----Ee-------------ccccc-------c-----------------------------EEEEEecC
Confidence 99999775321 00 00000 0 00000111
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
-++++|+.|++|++||..+++++..+..+ .+++.+..+ .. ...+++|+.|++|++||+++
T Consensus 342 --~~lvsgs~d~~v~VW~~~~~~cl~sl~gH----------~~~V~sl~~-----~~---~~~~~Sgs~D~~IkvWdl~~ 401 (537)
T KOG0274|consen 342 --PLLVSGSYDGTVKVWDPRTGKCLKSLSGH----------TGRVYSLIV-----DS---ENRLLSGSLDTTIKVWDLRT 401 (537)
T ss_pred --CEEEEEecCceEEEEEhhhceeeeeecCC----------cceEEEEEe-----cC---cceEEeeeeccceEeecCCc
Confidence 25677888999999999999998888642 233333222 11 13689999999999999998
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR 329 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg 329 (383)
...++.++++|.+-+..+.+. .+.+++++.|+.|++||.+..+....+... +...+..+.+. ...+++++.|+
T Consensus 402 ~~~c~~tl~~h~~~v~~l~~~--~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~---~~~~v~~l~~~--~~~il~s~~~~ 474 (537)
T KOG0274|consen 402 KRKCIHTLQGHTSLVSSLLLR--DNFLVSSSADGTIKLWDAEEGECLRTLEGR---HVGGVSALALG--KEEILCSSDDG 474 (537)
T ss_pred hhhhhhhhcCCcccccccccc--cceeEeccccccEEEeecccCceeeeeccC---CcccEEEeecC--cceEEEEecCC
Confidence 535678899998888665553 356899999999999999876654433211 44567777776 45788899999
Q ss_pred cEEEEEcCCCceEEEecccc
Q 016769 330 RVRIYNYRKGSALAILKYHH 349 (383)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~h~ 349 (383)
++++||+++++.+..+-.+.
T Consensus 475 ~~~l~dl~~~~~~~~l~~~~ 494 (537)
T KOG0274|consen 475 SVKLWDLRSGTLIRTLLSTD 494 (537)
T ss_pred eeEEEecccCchhhhhhhcc
Confidence 99999999998876553333
No 61
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.93 E-value=3e-25 Score=192.21 Aligned_cols=247 Identities=23% Similarity=0.343 Sum_probs=178.7
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEee
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd 92 (383)
.+.+|..+|+++.++.++.+++||..||.||+|+..-.. +.....| ....|..++|+| ++++|+|++.|++|+|||
T Consensus 133 ilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn-Vk~~~ah-h~eaIRdlafSp--nDskF~t~SdDg~ikiWd 208 (464)
T KOG0284|consen 133 ILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN-VKIIQAH-HAEAIRDLAFSP--NDSKFLTCSDDGTIKIWD 208 (464)
T ss_pred HhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh-hHHhhHh-hhhhhheeccCC--CCceeEEecCCCeEEEEe
Confidence 356999999999999999999999999999999975332 2222222 224688999999 468999999999999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
...+.. ...++.+.+- +. ..+..+. +-
T Consensus 209 f~~~ke----e~vL~GHgwd----------------------Vk-------------------------svdWHP~--kg 235 (464)
T KOG0284|consen 209 FRMPKE----ERVLRGHGWD----------------------VK-------------------------SVDWHPT--KG 235 (464)
T ss_pred ccCCch----hheeccCCCC----------------------cc-------------------------eeccCCc--cc
Confidence 865421 1111110000 00 0011111 23
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
++++|+.|+.|++||.+++.+++++..+ +..+ +++ .|.++. ..|++++.|..++++|+++-.
T Consensus 236 LiasgskDnlVKlWDprSg~cl~tlh~H----------KntV--l~~-~f~~n~----N~Llt~skD~~~kv~DiR~mk- 297 (464)
T KOG0284|consen 236 LIASGSKDNLVKLWDPRSGSCLATLHGH----------KNTV--LAV-KFNPNG----NWLLTGSKDQSCKVFDIRTMK- 297 (464)
T ss_pred eeEEccCCceeEeecCCCcchhhhhhhc----------cceE--EEE-EEcCCC----CeeEEccCCceEEEEehhHhH-
Confidence 6677888899999999999999888642 1222 222 355443 479999999999999999533
Q ss_pred ceeeeeccccCeEEEEEeCCCCc-eEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcE
Q 016769 253 PLTAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRV 331 (383)
Q Consensus 253 ~~~~~~~h~~~v~~~~~~~~~~~-~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i 331 (383)
.+..+++|...|.++.++|-... +.+|+.|+.|..|.+..... +......+...|.+++++|-|..|++|+.|+++
T Consensus 298 El~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p---~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~ 374 (464)
T KOG0284|consen 298 ELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEP---LGEIPPAHDGEIWSLAYHPLGHILATGSNDRTV 374 (464)
T ss_pred HHHHhhcchhhheeeccccccccceeeccCCCceEEEecccccc---ccCCCcccccceeeeeccccceeEeecCCCcce
Confidence 35667899999999999887665 56789999999998762211 111234567789999999999999999999999
Q ss_pred EEEEcC
Q 016769 332 RIYNYR 337 (383)
Q Consensus 332 ~iwd~~ 337 (383)
++|.-.
T Consensus 375 rfw~r~ 380 (464)
T KOG0284|consen 375 RFWTRN 380 (464)
T ss_pred eeeccC
Confidence 999764
No 62
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=5.4e-23 Score=208.63 Aligned_cols=272 Identities=15% Similarity=0.206 Sum_probs=182.3
Q ss_pred CCeEEEeeCcccccccccc---cccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeee
Q 016769 39 GGELRIWDTVQHRTVSSSW---VHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCK 115 (383)
Q Consensus 39 D~~v~vW~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~ 115 (383)
+|.+++|+....+....+. .......+.+++|++ ++.++++||.|++|++||++....... ..+...
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~--dg~~latgg~D~~I~iwd~~~~~~~~~--------~~~~~~ 526 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDR--DGEFFATAGVNKKIKIFECESIIKDGR--------DIHYPV 526 (793)
T ss_pred hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECC--CCCEEEEEeCCCEEEEEECCccccccc--------ccccce
Confidence 6778888876543322111 111234578889998 468899999999999999854210000 000000
Q ss_pred EEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeee
Q 016769 116 LSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT 195 (383)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~ 195 (383)
..+.. .... . ...+.+....+ +++++.|++|++||+.+++.+.
T Consensus 527 ~~~~~-----------~~~v------------------------~-~l~~~~~~~~~-las~~~Dg~v~lWd~~~~~~~~ 569 (793)
T PLN00181 527 VELAS-----------RSKL------------------------S-GICWNSYIKSQ-VASSNFEGVVQVWDVARSQLVT 569 (793)
T ss_pred EEecc-----------cCce------------------------e-eEEeccCCCCE-EEEEeCCCeEEEEECCCCeEEE
Confidence 00000 0000 0 00111222233 4556678999999999887766
Q ss_pred EeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEe-CCCC
Q 016769 196 RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSID-ESCN 274 (383)
Q Consensus 196 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~-~~~~ 274 (383)
.+..+ .+.+.++. |.+.+ ...+++|+.|++|++||+++. ..+..+..+ ..+.++.|. +++.
T Consensus 570 ~~~~H----------~~~V~~l~---~~p~~---~~~L~Sgs~Dg~v~iWd~~~~-~~~~~~~~~-~~v~~v~~~~~~g~ 631 (793)
T PLN00181 570 EMKEH----------EKRVWSID---YSSAD---PTLLASGSDDGSVKLWSINQG-VSIGTIKTK-ANICCVQFPSESGR 631 (793)
T ss_pred EecCC----------CCCEEEEE---EcCCC---CCEEEEEcCCCEEEEEECCCC-cEEEEEecC-CCeEEEEEeCCCCC
Confidence 65432 12222322 33321 225889999999999999874 345555544 578889884 5677
Q ss_pred ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCC------ceEEEeccc
Q 016769 275 GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG------SALAILKYH 348 (383)
Q Consensus 275 ~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~------~~~~~~~~h 348 (383)
.+++|+.|+.|++||+....... .....+...|.++.|. ++.++++++.|++|++||+..+ +.+..+.+|
T Consensus 632 ~latgs~dg~I~iwD~~~~~~~~---~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh 707 (793)
T PLN00181 632 SLAFGSADHKVYYYDLRNPKLPL---CTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGH 707 (793)
T ss_pred EEEEEeCCCeEEEEECCCCCccc---eEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCC
Confidence 89999999999999997543111 1234566789999997 6789999999999999999743 567788999
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 349 HATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 349 ~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
...+.+++|+|++++||+|+.|+.|++|+..
T Consensus 708 ~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~ 738 (793)
T PLN00181 708 TNVKNFVGLSVSDGYIATGSETNEVFVYHKA 738 (793)
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCEEEEEECC
Confidence 9999999999999999999999999999964
No 63
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.93 E-value=1.8e-23 Score=198.09 Aligned_cols=245 Identities=21% Similarity=0.363 Sum_probs=180.3
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+.++.|++ +++.+++++.|+++++|+.++... +....+ ..|.
T Consensus 160 ~sv~~~~fs~--~g~~l~~~~~~~~i~~~~~~~~~~--~~~~~l---~~h~----------------------------- 203 (456)
T KOG0266|consen 160 PSVTCVDFSP--DGRALAAASSDGLIRIWKLEGIKS--NLLREL---SGHT----------------------------- 203 (456)
T ss_pred CceEEEEEcC--CCCeEEEccCCCcEEEeecccccc--hhhccc---cccc-----------------------------
Confidence 4577788888 467899999999999999865431 000000 0000
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCC-CeeeEeccCcCCCCCCcCCCCCceeeEEEe
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQA 221 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 221 (383)
....-..+++++. ++++++.|.++|+||++.. ..+..+..+ ...+++. .
T Consensus 204 ---------------~~v~~~~fs~d~~--~l~s~s~D~tiriwd~~~~~~~~~~l~gH----------~~~v~~~---~ 253 (456)
T KOG0266|consen 204 ---------------RGVSDVAFSPDGS--YLLSGSDDKTLRIWDLKDDGRNLKTLKGH----------STYVTSV---A 253 (456)
T ss_pred ---------------cceeeeEECCCCc--EEEEecCCceEEEeeccCCCeEEEEecCC----------CCceEEE---E
Confidence 0000112334544 4566788999999999444 566666532 1223333 3
Q ss_pred ecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee
Q 016769 222 YLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK 301 (383)
Q Consensus 222 ~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~ 301 (383)
|.|.. ..+++|+.|++|+|||+++ +.+...++.|..+|.+++|.+++..+++++.|+.|++||+......+ .+
T Consensus 254 f~p~g----~~i~Sgs~D~tvriWd~~~-~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~--~~ 326 (456)
T KOG0266|consen 254 FSPDG----NLLVSGSDDGTVRIWDVRT-GECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLC--LK 326 (456)
T ss_pred ecCCC----CEEEEecCCCcEEEEeccC-CeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceee--ee
Confidence 54432 3689999999999999998 66788999999999999999999999999999999999998654221 12
Q ss_pred eeecCCC--CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccc---eeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 302 EINLERP--GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT---CNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 302 ~~~~~~~--~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~---v~~v~~spd~~~las~s~d~~i~~w 376 (383)
.+..... .++.+.|+|+++++++++.|+.+++||+..++....+.+|... +.+..++++++++.+|+.|+.|++|
T Consensus 327 ~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~ 406 (456)
T KOG0266|consen 327 LLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVW 406 (456)
T ss_pred cccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEE
Confidence 2222222 5899999999999999999999999999999999999999874 4444567899999999999999999
Q ss_pred eCCC
Q 016769 377 ELYP 380 (383)
Q Consensus 377 ~~~~ 380 (383)
|+..
T Consensus 407 ~~~s 410 (456)
T KOG0266|consen 407 DSSS 410 (456)
T ss_pred eCCc
Confidence 9863
No 64
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.92 E-value=2.8e-23 Score=178.62 Aligned_cols=191 Identities=21% Similarity=0.312 Sum_probs=142.7
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC---
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN--- 249 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~--- 249 (383)
.+++++.|+++++|-.+.+.......+.. ..++..+-+..+. + ...++++|+.|.+|+||+..+
T Consensus 161 ~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~------~GHk~~V~sVsv~---~----sgtr~~SgS~D~~lkiWs~~~~~~ 227 (423)
T KOG0313|consen 161 LFVSASMDQTLRLWKWNVGENKVKALKVC------RGHKRSVDSVSVD---S----SGTRFCSGSWDTMLKIWSVETDEE 227 (423)
T ss_pred eEEEecCCceEEEEEecCchhhhhHHhHh------cccccceeEEEec---C----CCCeEEeecccceeeecccCCCcc
Confidence 45677889999999988766433222110 0122222233322 1 123688999999999999311
Q ss_pred ---------------------CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 250 ---------------------PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 250 ---------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
.+.|+.++.+|.++|..+.|++ ...+++++.|.+|+.||+........+ ....
T Consensus 228 ~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~-----~~~k 301 (423)
T KOG0313|consen 228 DELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTL-----TTNK 301 (423)
T ss_pred ccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeee-----ecCc
Confidence 1346778899999999999987 456799999999999999865432221 1234
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCc---eEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCCCCC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGS---ALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELYPPH 382 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~~~~ 382 (383)
.+++++++|..+.|++|+.|+-|++||.+++. ...++.+|.+.|.++.|+|... +|++||.|+++++||+..+.
T Consensus 302 sl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k 379 (423)
T KOG0313|consen 302 SLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK 379 (423)
T ss_pred ceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC
Confidence 68999999999999999999999999998753 2357889999999999999876 89999999999999997654
No 65
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.92 E-value=1.5e-23 Score=189.67 Aligned_cols=331 Identities=21% Similarity=0.234 Sum_probs=205.5
Q ss_pred CCCCCCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEec
Q 016769 3 KRPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (383)
Q Consensus 3 ~~~~~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 82 (383)
+||.|+....+++||++.|++|...|.|.+|+|||.||+||||.+.+++|+...... .-|.+++|.|..+...| .+
T Consensus 385 LrPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d---~~I~~vaw~P~~~~~vL-Av 460 (733)
T KOG0650|consen 385 LRPFPTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD---SEIRSVAWNPLSDLCVL-AV 460 (733)
T ss_pred cCCCcceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec---ceeEEEEecCCCCceeE-EE
Confidence 588999999999999999999999999999999999999999999999998765332 35789999986433333 33
Q ss_pred ccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCcccee
Q 016769 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEII 162 (383)
Q Consensus 83 ~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (383)
+...++-+-|..=|..+. ... .+.....+-....+. .....+.................+.+.+
T Consensus 461 A~~~~~~ivnp~~G~~~e-----~~~----------t~ell~~~~~~~~p~-~~~~~W~~~~~~e~~~~v~~~I~~~k~i 524 (733)
T KOG0650|consen 461 AVGECVLIVNPIFGDRLE-----VGP----------TKELLASAPNESEPD-AAVVTWSRASLDELEKGVCIVIKHPKSI 524 (733)
T ss_pred EecCceEEeCccccchhh-----hcc----------hhhhhhcCCCccCCc-ccceeechhhhhhhccceEEEEecCCcc
Confidence 433445555432221000 000 000000000000000 0000000000000000000000001111
Q ss_pred cc--cCCCCCceeeeccC--CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeC
Q 016769 163 DD--VPAEGPKYMAVAGE--QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 238 (383)
Q Consensus 163 ~~--~~~~~~~~~~~~g~--~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~ 238 (383)
.+ ....| .|++++.. ....|.|.+|........+. -.++..++. .|.|... .++.++
T Consensus 525 ~~vtWHrkG-DYlatV~~~~~~~~VliHQLSK~~sQ~PF~----------kskG~vq~v---~FHPs~p----~lfVaT- 585 (733)
T KOG0650|consen 525 RQVTWHRKG-DYLATVMPDSGNKSVLIHQLSKRKSQSPFR----------KSKGLVQRV---KFHPSKP----YLFVAT- 585 (733)
T ss_pred ceeeeecCC-ceEEEeccCCCcceEEEEecccccccCchh----------hcCCceeEE---EecCCCc----eEEEEe-
Confidence 11 11223 45555432 22457777775544322221 122334443 3555432 355555
Q ss_pred CCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCC
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD 318 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 318 (383)
...|++||+.+ ....+.+......|..|++++.|+.++.++.|+.+..+|++-.+... +.+..|...+++++||+-
T Consensus 586 q~~vRiYdL~k-qelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPy---k~lr~H~~avr~Va~H~r 661 (733)
T KOG0650|consen 586 QRSVRIYDLSK-QELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPY---KTLRLHEKAVRSVAFHKR 661 (733)
T ss_pred ccceEEEehhH-HHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchh---HHhhhhhhhhhhhhhccc
Confidence 56899999976 33344444445678899999999999999999999999998654321 345567778999999999
Q ss_pred CcEEEEEeCCCcEEEEEc------CCC---ceEEEecccccc----eeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 319 SKIAATAGWDRRVRIYNY------RKG---SALAILKYHHAT----CNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 319 ~~~l~s~~~dg~i~iwd~------~~~---~~~~~~~~h~~~----v~~v~~spd~~~las~s~d~~i~~w 376 (383)
-.+|++|+.||++.+|.- ... -+++.+++|... |..+.|||...+|++++.||+|++|
T Consensus 662 yPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 662 YPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred cceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 999999999999999954 222 345788899877 8999999999999999999999998
No 66
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=1.6e-23 Score=191.21 Aligned_cols=298 Identities=19% Similarity=0.283 Sum_probs=195.3
Q ss_pred ecCCcee---eEEEe-CCCCeEEEecCCCeEEEeeCccccc------ccccccccccceeeeeeecCCCCcceeEecccC
Q 016769 16 GHRASVT---DVCFH-QTKPILFAGTTGGELRIWDTVQHRT------VSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 16 gH~~~V~---~v~f~-~~~~~L~sgs~D~~v~vW~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
.|...|. ++..+ |.+++|+|||.||.|++|++..... ......|..- +--+.... .++.|+|+|.|
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDW--VNDiiL~~--~~~tlIS~SsD 94 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDW--VNDIILCG--NGKTLISASSD 94 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhH--HhhHHhhc--CCCceEEecCC
Confidence 4555565 45554 4567899999999999999865432 3333344321 11112222 34689999999
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
.||++|+...+.. -.+.+++++..+.-.+.
T Consensus 95 tTVK~W~~~~~~~--~c~stir~H~DYVkcla------------------------------------------------ 124 (735)
T KOG0308|consen 95 TTVKVWNAHKDNT--FCMSTIRTHKDYVKCLA------------------------------------------------ 124 (735)
T ss_pred ceEEEeecccCcc--hhHhhhhcccchheeee------------------------------------------------
Confidence 9999999876531 01112222211100000
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCe--eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
.+.....++++|+-|+.|.+||++++.. +.+..+ ....+....++..++..+. ++....+++|+-.+.|+
T Consensus 125 ~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~-~t~~sl~sG~k~siYSLA~-------N~t~t~ivsGgtek~lr 196 (735)
T KOG0308|consen 125 YIAKNNELVASGGLDRKIFLWDINTGTATLVASFNN-VTVNSLGSGPKDSIYSLAM-------NQTGTIIVSGGTEKDLR 196 (735)
T ss_pred ecccCceeEEecCCCccEEEEEccCcchhhhhhccc-cccccCCCCCccceeeeec-------CCcceEEEecCcccceE
Confidence 0112245788899999999999998743 333221 1111112123333333222 12223577899999999
Q ss_pred EEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEE
Q 016769 244 VWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAA 323 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~ 323 (383)
+||.++... +..+.+|++.|.++-.+.++..+++++.|++|++|||..+ +|... ...|..++.++..+|+-.++.
T Consensus 197 ~wDprt~~k-imkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ--rCl~T--~~vH~e~VWaL~~~~sf~~vY 271 (735)
T KOG0308|consen 197 LWDPRTCKK-IMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ--RCLAT--YIVHKEGVWALQSSPSFTHVY 271 (735)
T ss_pred Eeccccccc-eeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc--ceeee--EEeccCceEEEeeCCCcceEE
Confidence 999998655 5567899999999999999999999999999999999754 44443 334556799999999999999
Q ss_pred EEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 324 TAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 324 s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+|+.||.|..=|+++......+-..+.+|..+..+-...-+=.++.|+.|+-|.+.+
T Consensus 272 sG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~ 328 (735)
T KOG0308|consen 272 SGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEP 328 (735)
T ss_pred ecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCcc
Confidence 999999999999987543333434566677777664444446677899999998754
No 67
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.92 E-value=4.2e-23 Score=183.86 Aligned_cols=309 Identities=14% Similarity=0.131 Sum_probs=199.7
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccc---ccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
.|.+|+..|.++++.|.|..|+|||-|-+|++||+..-.. -.........|.+-++.+++. ++.++..+.....+
T Consensus 162 ~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~T--g~~iLvvsg~aqak 239 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVT--GDQILVVSGSAQAK 239 (641)
T ss_pred eccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCC--CCeEEEEecCccee
Confidence 6899999999999999999999999999999999753211 111111234567888999984 56777777777889
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+.|-..-+.. ..+ .+..++.....++ ++.... .-....+..
T Consensus 240 l~DRdG~~~~----e~~-KGDQYI~Dm~nTK-----------------------------GHia~l-----t~g~whP~~ 280 (641)
T KOG0772|consen 240 LLDRDGFEIV----EFS-KGDQYIRDMYNTK-----------------------------GHIAEL-----TCGCWHPDN 280 (641)
T ss_pred EEccCCceee----eee-ccchhhhhhhccC-----------------------------Cceeee-----eccccccCc
Confidence 9985432110 000 0000000000011 111000 000112222
Q ss_pred CceeeeccCCcceEEEEecCCCC-eeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
+..+ .+.+.|+++|+||+.+.+ ++..+.... ....++-.. ...|.++ ...+++|..||.|.+||.+
T Consensus 281 k~~F-lT~s~DgtlRiWdv~~~k~q~qVik~k~-------~~g~Rv~~t-sC~~nrd----g~~iAagc~DGSIQ~W~~~ 347 (641)
T KOG0772|consen 281 KEEF-LTCSYDGTLRIWDVNNTKSQLQVIKTKP-------AGGKRVPVT-SCAWNRD----GKLIAAGCLDGSIQIWDKG 347 (641)
T ss_pred ccce-EEecCCCcEEEEecCCchhheeEEeecc-------CCCcccCce-eeecCCC----cchhhhcccCCceeeeecC
Confidence 2223 344678999999998765 333332100 001111111 1134333 2357789999999999986
Q ss_pred CCC--Cceeeeecccc--CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEE
Q 016769 249 NPG--IPLTAMKVHLE--PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 324 (383)
Q Consensus 249 ~~~--~~~~~~~~h~~--~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s 324 (383)
+-. ..+..-+.|.. .|.|+.|+.++++|++=|.|+++++|||+.... ++....--.....-+.++|+|+.+.|++
T Consensus 348 ~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kk-pL~~~tgL~t~~~~tdc~FSPd~kli~T 426 (641)
T KOG0772|consen 348 SRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKK-PLNVRTGLPTPFPGTDCCFSPDDKLILT 426 (641)
T ss_pred CcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccccc-chhhhcCCCccCCCCccccCCCceEEEe
Confidence 532 12344567876 899999999999999999999999999986532 2222111111234567889999999999
Q ss_pred EeC------CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 325 AGW------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 325 ~~~------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
|+. .|++.+||..+-..++.+.--...|..+.|+|.=+.+..|+.||+++++
T Consensus 427 GtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 427 GTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred cccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEE
Confidence 874 5789999999988888777667778889999988889999999999986
No 68
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.92 E-value=7.1e-23 Score=171.16 Aligned_cols=241 Identities=20% Similarity=0.318 Sum_probs=170.5
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+..+.|.| ++..|+|+|.|..|-+|++-... .. ...++.++... ..
T Consensus 48 geI~~~~F~P--~gs~~aSgG~Dr~I~LWnv~gdc-eN--~~~lkgHsgAV--M~------------------------- 95 (338)
T KOG0265|consen 48 GEIYTIKFHP--DGSCFASGGSDRAIVLWNVYGDC-EN--FWVLKGHSGAV--ME------------------------- 95 (338)
T ss_pred ceEEEEEECC--CCCeEeecCCcceEEEEeccccc-cc--eeeecccccee--Ee-------------------------
Confidence 4577888999 57899999999999999974321 00 01111000000 00
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEee
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAY 222 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 222 (383)
.....++. .+++.+.|.+++.||+++++++.+++.+... +. ..
T Consensus 96 --------------------l~~~~d~s--~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~-------------vN--s~ 138 (338)
T KOG0265|consen 96 --------------------LHGMRDGS--HILSCGTDKTVRGWDAETGKRIRKHKGHTSF-------------VN--SL 138 (338)
T ss_pred --------------------eeeccCCC--EEEEecCCceEEEEecccceeeehhccccce-------------ee--ec
Confidence 00112222 2344456889999999999988777653211 11 11
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee
Q 016769 223 LPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE 302 (383)
Q Consensus 223 ~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~ 302 (383)
.|.+. +...+.+|+.|+++++||+|+. .+++++.. ...+..+.|.......++|+.|+.|++||+....+. ..
T Consensus 139 ~p~rr-g~~lv~SgsdD~t~kl~D~R~k-~~~~t~~~-kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~----~~ 211 (338)
T KOG0265|consen 139 DPSRR-GPQLVCSGSDDGTLKLWDIRKK-EAIKTFEN-KYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGL----YT 211 (338)
T ss_pred Ccccc-CCeEEEecCCCceEEEEeeccc-chhhcccc-ceeEEEEEecccccceeeccccCceeeeccccCcce----EE
Confidence 13322 2335778999999999999974 34444432 346788999888888999999999999999755443 34
Q ss_pred eecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC----CceEEEeccccc----ceeEEEEeCCCCEEEEEeCCCcEE
Q 016769 303 INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK----GSALAILKYHHA----TCNAVSFSSDCKLMASASEDSTVA 374 (383)
Q Consensus 303 ~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~h~~----~v~~v~~spd~~~las~s~d~~i~ 374 (383)
+..+...|+.++.+|+|.++.+-+.|.++++||++. .+++..+.+|.. .....+|||++..+.+|+.|..++
T Consensus 212 lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vy 291 (338)
T KOG0265|consen 212 LSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVY 291 (338)
T ss_pred eecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEE
Confidence 567788999999999999999999999999999964 344777777643 346678999999999999999999
Q ss_pred EEeCC
Q 016769 375 LWELY 379 (383)
Q Consensus 375 ~w~~~ 379 (383)
+||..
T Consensus 292 vwd~~ 296 (338)
T KOG0265|consen 292 VWDTT 296 (338)
T ss_pred Eeecc
Confidence 99974
No 69
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=3.9e-21 Score=154.81 Aligned_cols=292 Identities=18% Similarity=0.281 Sum_probs=198.6
Q ss_pred ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccc-----------cccc---cccccceeeeeeecCCCCcceeEe
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTV-----------SSSW---VHSAAHGIVSVATGPSIGLNKVIS 81 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~-----------~~~~---~~~~~~~~~~~~~~~~~~~~~l~s 81 (383)
.-+..|++++|+|.|.+-+.||...++||-.......+ ..+. .| ....+.++++++. ++.+++
T Consensus 30 ~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~kh-hkgsiyc~~ws~~--geliat 106 (350)
T KOG0641|consen 30 EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKH-HKGSIYCTAWSPC--GELIAT 106 (350)
T ss_pred cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccc-cCccEEEEEecCc--cCeEEe
Confidence 45678999999999999999999999999864321110 1110 11 2246899999984 788999
Q ss_pred cccCCeEEEeecCCCCC--CC-CCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCc
Q 016769 82 QGRDGTVKCWDIENGGL--SS-NPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRS 158 (383)
Q Consensus 82 ~~~D~ti~~Wd~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (383)
|+.|.+|++-..+...+ .. ...+.++.+..+ -
T Consensus 107 gsndk~ik~l~fn~dt~~~~g~dle~nmhdgtir---------------------------------------------d 141 (350)
T KOG0641|consen 107 GSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIR---------------------------------------------D 141 (350)
T ss_pred cCCCceEEEEecccccccccCcceeeeecCCcee---------------------------------------------e
Confidence 99999999987754321 00 001111110000 0
Q ss_pred cceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeC
Q 016769 159 FEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 238 (383)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~ 238 (383)
..++ .-+..+..+++.+|..|-.|.+-|-.+++....+.. + .+..++...+ + ..-+++|++
T Consensus 142 l~fl-d~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sg----------h--tghilalysw--n----~~m~~sgsq 202 (350)
T KOG0641|consen 142 LAFL-DDPESGGAILASAGAGDCKIYITDCGRGQGFHALSG----------H--TGHILALYSW--N----GAMFASGSQ 202 (350)
T ss_pred eEEe-cCCCcCceEEEecCCCcceEEEeecCCCCcceeecC----------C--cccEEEEEEe--c----CcEEEccCC
Confidence 0111 111233456677777677787777766665443322 1 2333333222 1 123678999
Q ss_pred CCcEEEEeCCCCCCceeeee--c-----cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 239 DGSILVWDIRNPGIPLTAMK--V-----HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~--~-----h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
|++|++||++-+.. +.++. . ....|..++++|+++.+++|-.|....+||++.. +..+ ....+...|.
T Consensus 203 dktirfwdlrv~~~-v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~--r~iq--~f~phsadir 277 (350)
T KOG0641|consen 203 DKTIRFWDLRVNSC-VNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGG--RMIQ--RFHPHSADIR 277 (350)
T ss_pred CceEEEEeeeccce-eeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCC--ceee--eeCCCcccee
Confidence 99999999986432 33221 1 2357899999999999999999999999999743 3332 3445677899
Q ss_pred EEEECCCCcEEEEEeCCCcEEEEEcCC----CceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 312 GTSIRPDSKIAATAGWDRRVRIYNYRK----GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++.|+|...|+.+++.|.+|++=|+.- .-++-....|+..+..+.|+|..--+++.|.|.++.+|-+.
T Consensus 278 ~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 278 CVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred EEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 999999999999999999999999842 12233556799999999999998889999999999999874
No 70
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.92 E-value=1.6e-22 Score=178.00 Aligned_cols=285 Identities=18% Similarity=0.273 Sum_probs=189.3
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccc-cc------cc-------cc--cccceeeeeeecCCC
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTV-SS------SW-------VH--SAAHGIVSVATGPSI 74 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~-~~------~~-------~~--~~~~~~~~~~~~~~~ 74 (383)
..++..|.-+|.+|+++||.+++++++.|++|.=|++.+++.. .. +. .+ .+..-+.+++.++
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~-- 212 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSS-- 212 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcC--
Confidence 5678899999999999999999999999999999998776633 10 11 11 1112367778887
Q ss_pred CcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccc
Q 016769 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKE 154 (383)
Q Consensus 75 ~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (383)
++.+|++|+.|..|.||++++.+.... .. .| +.
T Consensus 213 Dgkylatgg~d~~v~Iw~~~t~ehv~~----~~---gh--------------------r~-------------------- 245 (479)
T KOG0299|consen 213 DGKYLATGGRDRHVQIWDCDTLEHVKV----FK---GH--------------------RG-------------------- 245 (479)
T ss_pred CCcEEEecCCCceEEEecCcccchhhc----cc---cc--------------------cc--------------------
Confidence 579999999999999999988753221 00 00 00
Q ss_pred cCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEE
Q 016769 155 SNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL 234 (383)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (383)
.++..+...++.-+ .+++.|+++++|+++....+.++-. +++.++. +.++.- ...+.
T Consensus 246 -----~V~~L~fr~gt~~l-ys~s~Drsvkvw~~~~~s~vetlyG----------Hqd~v~~--IdaL~r-----eR~vt 302 (479)
T KOG0299|consen 246 -----AVSSLAFRKGTSEL-YSASADRSVKVWSIDQLSYVETLYG----------HQDGVLG--IDALSR-----ERCVT 302 (479)
T ss_pred -----ceeeeeeecCccce-eeeecCCceEEEehhHhHHHHHHhC----------Cccceee--echhcc-----cceEE
Confidence 00000111122222 2456789999999987666555432 2222111 111111 11234
Q ss_pred EEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCC-------
Q 016769 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER------- 307 (383)
Q Consensus 235 sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~------- 307 (383)
+|+.|.++++|++-... ...+.+|...+.|++|=.+ ..+++|+.+|.|.+|++......+..........
T Consensus 303 VGgrDrT~rlwKi~ees--qlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~ 379 (479)
T KOG0299|consen 303 VGGRDRTVRLWKIPEES--QLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNG 379 (479)
T ss_pred eccccceeEEEeccccc--eeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEeeccccccCCcccccc
Confidence 47799999999995433 3445677778889888332 4579999999999999876543333222111111
Q ss_pred -CCeEEEEECCCCcEEEEEeCCCcEEEEEcCCC----ceEEEecccccceeEEEEeCCCCEE-EEEeCCC
Q 016769 308 -PGISGTSIRPDSKIAATAGWDRRVRIYNYRKG----SALAILKYHHATCNAVSFSSDCKLM-ASASEDS 371 (383)
Q Consensus 308 -~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~v~~spd~~~l-as~s~d~ 371 (383)
..|++++..|+..++|+|+++|.||+|-+..+ +++..+. -.+.|++++|+++|+.+ |..+...
T Consensus 380 ~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGkEh 448 (479)
T KOG0299|consen 380 NFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGKEH 448 (479)
T ss_pred ccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEeccccc
Confidence 26899999999999999999999999999877 3344443 66789999999999954 4444443
No 71
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.92 E-value=6.7e-23 Score=172.05 Aligned_cols=305 Identities=16% Similarity=0.228 Sum_probs=195.2
Q ss_pred CCCCCCC-CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcc------cccc------------cccccccccc
Q 016769 3 KRPPPPD-PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ------HRTV------------SSSWVHSAAH 63 (383)
Q Consensus 3 ~~~~~~~-~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~------~~~~------------~~~~~~~~~~ 63 (383)
+.|.|++ ....|..|++++++-+|+|||.++||||.|-.|++.|++. .+.+ ..+..| ..
T Consensus 96 ~s~e~~~yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH--~d 173 (430)
T KOG0640|consen 96 SSPEPSEYETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDH--VD 173 (430)
T ss_pred CCCCCcccceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhc--cC
Confidence 3443333 5567899999999999999999999999999999999861 1111 111112 23
Q ss_pred eeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcc
Q 016769 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET 143 (383)
Q Consensus 64 ~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (383)
.+-.+.|.|. ...|+|++.|+|||++|+......+. -......
T Consensus 174 evn~l~FHPr--e~ILiS~srD~tvKlFDfsK~saKrA----------------------~K~~qd~------------- 216 (430)
T KOG0640|consen 174 EVNDLDFHPR--ETILISGSRDNTVKLFDFSKTSAKRA----------------------FKVFQDT------------- 216 (430)
T ss_pred cccceeecch--hheEEeccCCCeEEEEecccHHHHHH----------------------HHHhhcc-------------
Confidence 4667888884 57899999999999999865421100 0000000
Q ss_pred cccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeec
Q 016769 144 VDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYL 223 (383)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 223 (383)
+. .-..+|.+.| .|+++ |.+..++|+||+++.++......+ ..+.+.+ . ...+.
T Consensus 217 ----------~~----vrsiSfHPsG-efllv-gTdHp~~rlYdv~T~QcfvsanPd-------~qht~ai--~-~V~Ys 270 (430)
T KOG0640|consen 217 ----------EP----VRSISFHPSG-EFLLV-GTDHPTLRLYDVNTYQCFVSANPD-------DQHTGAI--T-QVRYS 270 (430)
T ss_pred ----------ce----eeeEeecCCC-ceEEE-ecCCCceeEEeccceeEeeecCcc-------cccccce--e-EEEec
Confidence 00 0011233444 46655 566789999999998865433211 0111111 1 11233
Q ss_pred CCCCCCceEEEEEeCCCcEEEEeCCCCCCceeee-ecccc-CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee
Q 016769 224 PSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM-KVHLE-PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK 301 (383)
Q Consensus 224 ~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~-~~h~~-~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~ 301 (383)
+. ....++|+.||.|+|||=-+.+ ++.++ +.|.. .|.+..|..+++++++.|.|..+++|.+.. ++++...
T Consensus 271 ~t----~~lYvTaSkDG~IklwDGVS~r-Cv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t--~R~l~~Y 343 (430)
T KOG0640|consen 271 ST----GSLYVTASKDGAIKLWDGVSNR-CVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEIST--GRMLKEY 343 (430)
T ss_pred CC----ccEEEEeccCCcEEeeccccHH-HHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecC--CceEEEE
Confidence 22 2357899999999999966543 34444 45654 677888999999999999999999999864 3444332
Q ss_pred eee---cCCCCeEEEEECCCCcEEEEEe-CCCcEEEEEcCCCceEEEe-cccccceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 302 EIN---LERPGISGTSIRPDSKIAATAG-WDRRVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 302 ~~~---~~~~~i~~~~~~p~~~~l~s~~-~dg~i~iwd~~~~~~~~~~-~~h~~~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
.-- ..+.--+...|+....|++.-. ..+.+.-||.++......+ .+|.+.+..+.-||.+.-+.++|.|-.+++|
T Consensus 344 tGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFW 423 (430)
T KOG0640|consen 344 TGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFW 423 (430)
T ss_pred ecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeee
Confidence 211 0111122334554444544332 2345667999887655433 3799999999999999999999999999999
Q ss_pred eCC
Q 016769 377 ELY 379 (383)
Q Consensus 377 ~~~ 379 (383)
--.
T Consensus 424 yrr 426 (430)
T KOG0640|consen 424 YRR 426 (430)
T ss_pred eec
Confidence 643
No 72
>PTZ00421 coronin; Provisional
Probab=99.92 E-value=2.7e-22 Score=189.78 Aligned_cols=231 Identities=15% Similarity=0.236 Sum_probs=149.5
Q ss_pred eeeeecCCceeeEEEeC-CCCeEEEecCCCeEEEeeCcccc-------cccccccccccceeeeeeecCCCCcceeEecc
Q 016769 12 AVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHR-------TVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~-~~~~L~sgs~D~~v~vW~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 83 (383)
..|.||++.|++++|+| ++.+|+|||.|++|++||+.+.. .+..+..|. ..+.++.|.|. +.+.|++++
T Consensus 69 ~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~--~~V~~l~f~P~-~~~iLaSgs 145 (493)
T PTZ00421 69 PILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHT--KKVGIVSFHPS-AMNVLASAG 145 (493)
T ss_pred ceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCC--CcEEEEEeCcC-CCCEEEEEe
Confidence 35889999999999999 88999999999999999986542 122333332 45778888884 236889999
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.|++|++||++++.... .+.
T Consensus 146 ~DgtVrIWDl~tg~~~~----~l~-------------------------------------------------------- 165 (493)
T PTZ00421 146 ADMVVNVWDVERGKAVE----VIK-------------------------------------------------------- 165 (493)
T ss_pred CCCEEEEEECCCCeEEE----EEc--------------------------------------------------------
Confidence 99999999997652100 000
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
+. ...| .++ .|.++ ...+++++.|++|+
T Consensus 166 -------------~h-~~~V-------------------------------~sl---a~spd----G~lLatgs~Dg~Ir 193 (493)
T PTZ00421 166 -------------CH-SDQI-------------------------------TSL---EWNLD----GSLLCTTSKDKKLN 193 (493)
T ss_pred -------------CC-CCce-------------------------------EEE---EEECC----CCEEEEecCCCEEE
Confidence 00 0000 000 01111 01356677777777
Q ss_pred EEeCCCCCCceeeeeccccCe-EEEEEeCCCCceEEEE----cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCC
Q 016769 244 VWDIRNPGIPLTAMKVHLEPV-LCLSIDESCNGGISGG----ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD 318 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~~s~~----~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 318 (383)
+||++++. .+..+..|.... ..+.|.+....+++++ .|+.|++||++........ .... ....+....|+++
T Consensus 194 IwD~rsg~-~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~-~~~d-~~~~~~~~~~d~d 270 (493)
T PTZ00421 194 IIDPRDGT-IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYST-VDLD-QSSALFIPFFDED 270 (493)
T ss_pred EEECCCCc-EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeE-eccC-CCCceEEEEEcCC
Confidence 77777643 345556665432 3445555555555544 4789999999754422211 1111 1234556678999
Q ss_pred CcEEEEEe-CCCcEEEEEcCCCceEEEecc-cccceeEEEEeCC
Q 016769 319 SKIAATAG-WDRRVRIYNYRKGSALAILKY-HHATCNAVSFSSD 360 (383)
Q Consensus 319 ~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~-h~~~v~~v~~spd 360 (383)
++++++++ .|++|++||+.+++.+..... +..++..++|.|.
T Consensus 271 ~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 271 TNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred CCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence 99998887 599999999999887766543 4456777888874
No 73
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=2e-22 Score=178.61 Aligned_cols=279 Identities=17% Similarity=0.241 Sum_probs=190.3
Q ss_pred CCceeeEEEeCCCCe--EEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCC
Q 016769 18 RASVTDVCFHQTKPI--LFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~--L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~ 95 (383)
..+|.+|+|+|..++ .+|+|. +|.+++..+......+. .....+.++.|.. +|..|+.|...|.|+++|+.+
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S~--rvqly~~~~~~~~k~~s--rFk~~v~s~~fR~--DG~LlaaGD~sG~V~vfD~k~ 99 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSSV--RVQLYSSVTRSVRKTFS--RFKDVVYSVDFRS--DGRLLAAGDESGHVKVFDMKS 99 (487)
T ss_pred cCcceeEecCCCCCCceEEeccc--EEEEEecchhhhhhhHH--hhccceeEEEeec--CCeEEEccCCcCcEEEecccc
Confidence 468999999997653 444443 58889876543222211 1123466777776 467788888999999999543
Q ss_pred CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeee
Q 016769 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAV 175 (383)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (383)
...++ .+..++...|. ..+++.+ .-+++
T Consensus 100 r~iLR--~~~ah~apv~~-------------------------------------------------~~f~~~d-~t~l~ 127 (487)
T KOG0310|consen 100 RVILR--QLYAHQAPVHV-------------------------------------------------TKFSPQD-NTMLV 127 (487)
T ss_pred HHHHH--HHhhccCceeE-------------------------------------------------EEecccC-CeEEE
Confidence 21100 00000000000 1122222 23677
Q ss_pred ccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCcee
Q 016769 176 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 255 (383)
Q Consensus 176 ~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~ 255 (383)
+|++|+.+++||+.+......+.. +.+++-|.++ .|.+ ..-+++|++||+||+||++.....+.
T Consensus 128 s~sDd~v~k~~d~s~a~v~~~l~~----------htDYVR~g~~---~~~~---~hivvtGsYDg~vrl~DtR~~~~~v~ 191 (487)
T KOG0310|consen 128 SGSDDKVVKYWDLSTAYVQAELSG----------HTDYVRCGDI---SPAN---DHIVVTGSYDGKVRLWDTRSLTSRVV 191 (487)
T ss_pred ecCCCceEEEEEcCCcEEEEEecC----------CcceeEeecc---ccCC---CeEEEecCCCceEEEEEeccCCceeE
Confidence 889999999999988775333332 2334444433 2211 12478999999999999998654444
Q ss_pred eeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEE
Q 016769 256 AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 335 (383)
Q Consensus 256 ~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd 335 (383)
.+ .|..||..+-+-|.+..++++ ..+.+++||+-.... + ...+..|...|+|+++..++..|++|+-|+.+++||
T Consensus 192 el-nhg~pVe~vl~lpsgs~iasA-gGn~vkVWDl~~G~q--l-l~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd 266 (487)
T KOG0310|consen 192 EL-NHGCPVESVLALPSGSLIASA-GGNSVKVWDLTTGGQ--L-LTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFD 266 (487)
T ss_pred Ee-cCCCceeeEEEcCCCCEEEEc-CCCeEEEEEecCCce--e-hhhhhcccceEEEEEeecCCceEeecccccceEEEE
Confidence 44 488899999999887766665 466799999974321 1 112333667899999999999999999999999999
Q ss_pred cCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 336 YRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 336 ~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
+.+-+.+..++ ..++|.+++.+||++.++.|..||.+.+=
T Consensus 267 ~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 267 TTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIR 306 (487)
T ss_pred ccceEEEEeee-cccceeeEEecCCCceEEEecccceeeee
Confidence 88888888874 78899999999999999999999988664
No 74
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.91 E-value=3e-22 Score=167.07 Aligned_cols=296 Identities=19% Similarity=0.292 Sum_probs=200.2
Q ss_pred eeeeecCCceeeEEEeC-CCCeEEEecCCCeEEEeeCcccc------------cccccccccccc--eeeeeeecCCCCc
Q 016769 12 AVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHR------------TVSSSWVHSAAH--GIVSVATGPSIGL 76 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~-~~~~L~sgs~D~~v~vW~~~~~~------------~~~~~~~~~~~~--~~~~~~~~~~~~~ 76 (383)
...+-|.+.|+++...+ .|++++||++||.+.|||+++.. |. .-..|...| .+..+.+.|- +.
T Consensus 37 d~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~-v~~~h~~~Hky~iss~~WyP~-Dt 114 (397)
T KOG4283|consen 37 DFVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCI-VAKQHENGHKYAISSAIWYPI-DT 114 (397)
T ss_pred ceeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeee-ccccCCccceeeeeeeEEeee-cC
Confidence 34568999999999977 68999999999999999986532 11 111232222 3555666664 44
Q ss_pred ceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccC
Q 016769 77 NKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESN 156 (383)
Q Consensus 77 ~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (383)
..|.|++-|.++|+||.++-+... .+.+ + ..++....
T Consensus 115 GmFtssSFDhtlKVWDtnTlQ~a~--~F~m---------------e----------~~VYsham---------------- 151 (397)
T KOG4283|consen 115 GMFTSSSFDHTLKVWDTNTLQEAV--DFKM---------------E----------GKVYSHAM---------------- 151 (397)
T ss_pred ceeecccccceEEEeecccceeeE--Eeec---------------C----------ceeehhhc----------------
Confidence 688999999999999987642100 0000 0 00000000
Q ss_pred CccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEE
Q 016769 157 RSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG 236 (383)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 236 (383)
.+-.....++++|..+-.||+=|+.++..-..+..+ +.-++++. ++|... -.+.+|
T Consensus 152 --------Sp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGH------------r~~vlaV~-Wsp~~e---~vLatg 207 (397)
T KOG4283|consen 152 --------SPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGH------------RDGVLAVE-WSPSSE---WVLATG 207 (397)
T ss_pred --------ChhhhcceEEEEecCCCcEEEEeccCCcceeeeccc------------cCceEEEE-eccCce---eEEEec
Confidence 001111357778888889999999998876666531 22234443 555532 247789
Q ss_pred eCCCcEEEEeCCCCCCceee--------------eeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee
Q 016769 237 YEDGSILVWDIRNPGIPLTA--------------MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE 302 (383)
Q Consensus 237 ~~dg~i~~wdl~~~~~~~~~--------------~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~ 302 (383)
+.||.|++||++...-++.. -..|++.|+.++|..++..+++++.|.++++|+...... .++..
T Consensus 208 saDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~n--tl~~~ 285 (397)
T KOG4283|consen 208 SADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRN--TLREF 285 (397)
T ss_pred CCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCcc--ccccc
Confidence 99999999999864222332 345777899999999999999999999999999865432 22211
Q ss_pred eecCCCCeEEEEE---CCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 303 INLERPGISGTSI---RPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 303 ~~~~~~~i~~~~~---~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.+.....-..+++ +-+...++---.|+.+.++++..+..+..++.|-+.|.|.++-|+-+...+|+.|+.|..|-.
T Consensus 286 g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 286 GPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred ccccccccccceEEEeecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhhhccccCCccccccc
Confidence 1111111111222 223334555567799999999999999999999999999999999999999999999999965
No 75
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.91 E-value=3.8e-22 Score=183.94 Aligned_cols=324 Identities=19% Similarity=0.295 Sum_probs=198.3
Q ss_pred eeEEEeCCCCeEEEecCCCeEEEeeCcccccccccc---cccccceeeeeeecC---------CCCcceeEecccCCeEE
Q 016769 22 TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW---VHSAAHGIVSVATGP---------SIGLNKVISQGRDGTVK 89 (383)
Q Consensus 22 ~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~---~~~~~~~~~~~~~~~---------~~~~~~l~s~~~D~ti~ 89 (383)
-++.|++..++|...-.|+.+.|||+..-+++.... -|. ..+..+...| .+...-|+|++.|+|||
T Consensus 328 IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS--~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIR 405 (1080)
T KOG1408|consen 328 IACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHS--ACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIR 405 (1080)
T ss_pred eEEEecCCCceEEEEEcCceEEEEeccccccccceeeeeecc--ceeeeeccccccccCcccccCCccceeEecCCCcEE
Confidence 467899999999999999999999986654443221 122 2333333222 01124589999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcc-cccCccccccccCCccceecccCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET-VDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
+||++.+.. +.. .+. ......+.+.++........ .+...+.. ......++.....++. .++++
T Consensus 406 lW~l~~ctn--n~v--yrR---Nils~~l~ki~y~d~~~q~~----~d~~~~~fdka~~s~~d~r~G~R~~----~vSp~ 470 (1080)
T KOG1408|consen 406 LWDLAFCTN--NQV--YRR---NILSANLSKIPYEDSTQQIM----HDASAGIFDKALVSTCDSRFGFRAL----AVSPD 470 (1080)
T ss_pred Eeecccccc--cce--eec---ccchhhhhcCccccCchhhh----hhccCCcccccchhhcCcccceEEE----EECCC
Confidence 999976321 100 000 01111222222211000000 00000000 0000011111111122 23456
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
++ .+++|+..|.+|++||..-...+.+..+ ...++|+... .|. -+...+++++.|.-|.+||..
T Consensus 471 gq--hLAsGDr~GnlrVy~Lq~l~~~~~~eAH----------esEilcLeyS--~p~--~~~kLLASasrdRlIHV~Dv~ 534 (1080)
T KOG1408|consen 471 GQ--HLASGDRGGNLRVYDLQELEYTCFMEAH----------ESEILCLEYS--FPV--LTNKLLASASRDRLIHVYDVK 534 (1080)
T ss_pred cc--eecccCccCceEEEEehhhhhhhheecc----------cceeEEEeec--Cch--hhhHhhhhccCCceEEEEecc
Confidence 54 4577888899999999876655555432 2234554321 111 122357789999999999974
Q ss_pred CCCCceeeeeccc-------------------------------------------------cCeEEEEEeCCCCceEEE
Q 016769 249 NPGIPLTAMKVHL-------------------------------------------------EPVLCLSIDESCNGGISG 279 (383)
Q Consensus 249 ~~~~~~~~~~~h~-------------------------------------------------~~v~~~~~~~~~~~~~s~ 279 (383)
....++.++.+|. .-+..|.++|..+..+++
T Consensus 535 rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~ 614 (1080)
T KOG1408|consen 535 RNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTV 614 (1080)
T ss_pred cccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEE
Confidence 3221112221221 234567777777777888
Q ss_pred EcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeC
Q 016769 280 GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS 359 (383)
Q Consensus 280 ~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~sp 359 (383)
+.|..|+|||++.......++ .-..+.+..-.+.+.|.|.|+|+.+.|+++.++|..+++++.+.-||.+.|..+.|.+
T Consensus 615 cQDrnirif~i~sgKq~k~FK-gs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~n 693 (1080)
T KOG1408|consen 615 CQDRNIRIFDIESGKQVKSFK-GSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLN 693 (1080)
T ss_pred ecccceEEEeccccceeeeec-ccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecc
Confidence 888888888887542222221 1122445677888999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCC
Q 016769 360 DCKLMASASEDSTVALWELY 379 (383)
Q Consensus 360 d~~~las~s~d~~i~~w~~~ 379 (383)
|.++|++.+.||+|.+|.+.
T Consensus 694 DCkHlISvsgDgCIFvW~lp 713 (1080)
T KOG1408|consen 694 DCKHLISVSGDGCIFVWKLP 713 (1080)
T ss_pred cchhheeecCCceEEEEECc
Confidence 99999999999999999984
No 76
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=1e-22 Score=166.46 Aligned_cols=245 Identities=18% Similarity=0.302 Sum_probs=165.0
Q ss_pred CCceeeEEEeCCC-CeEEEecCCCeEEEeeCccc-ccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCC
Q 016769 18 RASVTDVCFHQTK-PILFAGTTGGELRIWDTVQH-RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (383)
Q Consensus 18 ~~~V~~v~f~~~~-~~L~sgs~D~~v~vW~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~ 95 (383)
.+.+..|+++++. +.+++++.||++|+||.... .++...+.|. ..+.++.+.+. ....++++|+|+|||+|+...
T Consensus 60 ~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~--~EV~Svdwn~~-~r~~~ltsSWD~TiKLW~~~r 136 (311)
T KOG0277|consen 60 EDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHK--REVYSVDWNTV-RRRIFLTSSWDGTIKLWDPNR 136 (311)
T ss_pred ccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhh--hheEEeccccc-cceeEEeeccCCceEeecCCC
Confidence 5778899999864 68999999999999995432 3333433333 45888888875 346778889999999999876
Q ss_pred CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeee
Q 016769 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAV 175 (383)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (383)
+.-. .+...+. .| ++. ..+++.-+. +++
T Consensus 137 ~~Sv----~Tf~gh~--~~--------------------Iy~-------------------------a~~sp~~~n-lfa 164 (311)
T KOG0277|consen 137 PNSV----QTFNGHN--SC--------------------IYQ-------------------------AAFSPHIPN-LFA 164 (311)
T ss_pred Ccce----EeecCCc--cE--------------------EEE-------------------------EecCCCCCC-eEE
Confidence 5311 1110000 00 000 011122222 345
Q ss_pred ccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCcee
Q 016769 176 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 255 (383)
Q Consensus 176 ~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~ 255 (383)
+.+.|+++++||++..-..+.++-+ ....+|+--.+ .+...+++|+.|+.|+.||+++-+.|+.
T Consensus 165 s~Sgd~~l~lwdvr~~gk~~~i~ah----------~~Eil~cdw~k------y~~~vl~Tg~vd~~vr~wDir~~r~pl~ 228 (311)
T KOG0277|consen 165 SASGDGTLRLWDVRSPGKFMSIEAH----------NSEILCCDWSK------YNHNVLATGGVDNLVRGWDIRNLRTPLF 228 (311)
T ss_pred EccCCceEEEEEecCCCceeEEEec----------cceeEeecccc------cCCcEEEecCCCceEEEEehhhccccce
Confidence 5566899999999775433334321 12334432221 1223588999999999999999888999
Q ss_pred eeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC-CCcEEEEEeCCCcEEE
Q 016769 256 AMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP-DSKIAATAGWDRRVRI 333 (383)
Q Consensus 256 ~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p-~~~~l~s~~~dg~i~i 333 (383)
.+.+|.-+|+.+.++|... .+++++.|=++++||...... . ......|..-+.++.+++ ++.++|+.++|+.++|
T Consensus 229 eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds-~--~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~V 305 (311)
T KOG0277|consen 229 ELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDS-A--IETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYV 305 (311)
T ss_pred eecCCceEEEEEecCcchhhHhhhccccceEEecccccchh-h--hhhhhccceEEeccccccccCceeeecccccceee
Confidence 9999999999999988654 568999999999999874332 1 112233444577777775 4679999999999999
Q ss_pred EEc
Q 016769 334 YNY 336 (383)
Q Consensus 334 wd~ 336 (383)
|+.
T Consensus 306 w~p 308 (311)
T KOG0277|consen 306 WNP 308 (311)
T ss_pred ecc
Confidence 984
No 77
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.90 E-value=4e-23 Score=182.70 Aligned_cols=242 Identities=21% Similarity=0.321 Sum_probs=175.6
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCC-CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccC
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN-GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVG 141 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (383)
.++.++.+.|. .+..|+|+|.|+.|+||++-. +.+.+ +-..|. .+ +.+
T Consensus 215 kgvsai~~fp~-~~hLlLS~gmD~~vklW~vy~~~~~lr-------tf~gH~-------k~------------Vrd---- 263 (503)
T KOG0282|consen 215 KGVSAIQWFPK-KGHLLLSGGMDGLVKLWNVYDDRRCLR-------TFKGHR-------KP------------VRD---- 263 (503)
T ss_pred cccchhhhccc-eeeEEEecCCCceEEEEEEecCcceeh-------hhhcch-------hh------------hhh----
Confidence 46777777774 357889999999999999854 32222 110010 00 000
Q ss_pred cccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEe
Q 016769 142 ETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQA 221 (383)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 221 (383)
..+...|..++ +++-|+.+++||+++++++.++..+.. ..++.
T Consensus 264 ---------------------~~~s~~g~~fL--S~sfD~~lKlwDtETG~~~~~f~~~~~--------------~~cvk 306 (503)
T KOG0282|consen 264 ---------------------ASFNNCGTSFL--SASFDRFLKLWDTETGQVLSRFHLDKV--------------PTCVK 306 (503)
T ss_pred ---------------------hhccccCCeee--eeecceeeeeeccccceEEEEEecCCC--------------ceeee
Confidence 01223344443 345689999999999999888864321 12335
Q ss_pred ecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee
Q 016769 222 YLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK 301 (383)
Q Consensus 222 ~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~ 301 (383)
|.|++ ...+++|+.|+.|+.||+|++. .+.....|..+|..+.|-+.+..+++.+.|+++++|+.+.+- .++.
T Consensus 307 f~pd~---~n~fl~G~sd~ki~~wDiRs~k-vvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v---~ik~ 379 (503)
T KOG0282|consen 307 FHPDN---QNIFLVGGSDKKIRQWDIRSGK-VVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPV---PIKN 379 (503)
T ss_pred cCCCC---CcEEEEecCCCcEEEEeccchH-HHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCc---cchh
Confidence 66665 2357889999999999999854 466777899999999998889999999999999999986432 2223
Q ss_pred eeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCC---ceEEEeccccc--ceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 302 EINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG---SALAILKYHHA--TCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 302 ~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~h~~--~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
....+.....++..+|+++++++=+.|..|.+|.+... ...+.+.+|.. .-..+.|||||++|++|+.||.+.+|
T Consensus 380 i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~w 459 (503)
T KOG0282|consen 380 IADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFW 459 (503)
T ss_pred hcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEe
Confidence 33444556788999999999999999999999988543 22356778864 45667899999999999999999999
Q ss_pred eCC
Q 016769 377 ELY 379 (383)
Q Consensus 377 ~~~ 379 (383)
|..
T Consensus 460 dwk 462 (503)
T KOG0282|consen 460 DWK 462 (503)
T ss_pred ech
Confidence 974
No 78
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=1.1e-21 Score=179.75 Aligned_cols=243 Identities=19% Similarity=0.259 Sum_probs=181.8
Q ss_pred ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCC
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~ 95 (383)
-+.+.|+++.++++|.+|+.|-.+|.|.|||..+.+.+..+..+ +...+-++++. ...+.+|+.|+.|..+|+..
T Consensus 215 ~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~-h~~rvg~laW~----~~~lssGsr~~~I~~~dvR~ 289 (484)
T KOG0305|consen 215 FGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGS-HASRVGSLAWN----SSVLSSGSRDGKILNHDVRI 289 (484)
T ss_pred cCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCC-cCceeEEEecc----CceEEEecCCCcEEEEEEec
Confidence 34899999999999999999999999999999887777666552 22345666665 36788999999999999865
Q ss_pred CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeee
Q 016769 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAV 175 (383)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (383)
.+..- .. +
T Consensus 290 ~~~~~------~~----------------------------------------------------------------~-- 297 (484)
T KOG0305|consen 290 SQHVV------ST----------------------------------------------------------------L-- 297 (484)
T ss_pred chhhh------hh----------------------------------------------------------------h--
Confidence 42100 00 0
Q ss_pred ccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCcee
Q 016769 176 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 255 (383)
Q Consensus 176 ~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~ 255 (383)
..+... ++.+ .+.++ ...+++|+.|+.+.|||... ..+..
T Consensus 298 -~~H~qe-----------VCgL-----------------------kws~d----~~~lASGgnDN~~~Iwd~~~-~~p~~ 337 (484)
T KOG0305|consen 298 -QGHRQE-----------VCGL-----------------------KWSPD----GNQLASGGNDNVVFIWDGLS-PEPKF 337 (484)
T ss_pred -hcccce-----------eeee-----------------------EECCC----CCeeccCCCccceEeccCCC-ccccE
Confidence 000000 1111 11111 12477899999999999855 44567
Q ss_pred eeeccccCeEEEEEeCCCCc-eEEE--EcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe--CCCc
Q 016769 256 AMKVHLEPVLCLSIDESCNG-GISG--GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG--WDRR 330 (383)
Q Consensus 256 ~~~~h~~~v~~~~~~~~~~~-~~s~--~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~--~dg~ 330 (383)
.+..|..+|..++|+|.... ||+| +.|+.|++||..... .+. .. ...+.|+++.|++..+-|+++. .+..
T Consensus 338 ~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~--~i~--~v-dtgsQVcsL~Wsk~~kEi~sthG~s~n~ 412 (484)
T KOG0305|consen 338 TFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGA--RID--SV-DTGSQVCSLIWSKKYKELLSTHGYSENQ 412 (484)
T ss_pred EEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCc--Eec--cc-ccCCceeeEEEcCCCCEEEEecCCCCCc
Confidence 78889999999999997665 4554 469999999987432 221 11 2346799999999987666554 5778
Q ss_pred EEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 331 VRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 331 i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
|.||+..+.+.+..+.+|...|..+++||||..+++|+.|.++++|++++
T Consensus 413 i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 413 ITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred EEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccC
Confidence 99999999999999999999999999999999999999999999999986
No 79
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=9.2e-22 Score=165.60 Aligned_cols=246 Identities=17% Similarity=0.309 Sum_probs=163.7
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
|...+..|.++|++||. +++++||||.|.+|+|||+.....+..+..| ...+.++.|.+....+.|+||+.||.|.
T Consensus 35 ~lF~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~qlg~ll~H--agsitaL~F~~~~S~shLlS~sdDG~i~ 110 (362)
T KOG0294|consen 35 PLFAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQLGILLSH--AGSITALKFYPPLSKSHLLSGSDDGHII 110 (362)
T ss_pred ccccccccccceeEEEe--cceeEeccCCCCcEEEEeccchhhhcceecc--ccceEEEEecCCcchhheeeecCCCcEE
Confidence 57788999999999998 7899999999999999999887777777666 3568888888754445899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+|++..=++ +.. .+.... ...-.++.|.+
T Consensus 111 iw~~~~W~~-------~~s----------lK~H~~----------------------------------~Vt~lsiHPS~ 139 (362)
T KOG0294|consen 111 IWRVGSWEL-------LKS----------LKAHKG----------------------------------QVTDLSIHPSG 139 (362)
T ss_pred EEEcCCeEE-------eee----------eccccc----------------------------------ccceeEecCCC
Confidence 999753211 000 000000 00001122333
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
+.-+ .+| .|+.+|+|+|-+++...
T Consensus 140 KLAL-sVg-~D~~lr~WNLV~Gr~a~------------------------------------------------------ 163 (362)
T KOG0294|consen 140 KLAL-SVG-GDQVLRTWNLVRGRVAF------------------------------------------------------ 163 (362)
T ss_pred ceEE-EEc-CCceeeeehhhcCccce------------------------------------------------------
Confidence 2222 222 24455666554433100
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR 329 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg 329 (383)
...++ + ....+.|++.+..++.++.+ .|-+|.++.-.- + .++. ....+.++.|- ++.++++|+.|+
T Consensus 164 ----v~~L~-~--~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v---~-~~i~-~~~r~l~~~~l-~~~~L~vG~d~~ 229 (362)
T KOG0294|consen 164 ----VLNLK-N--KATLVSWSPQGDHFVVSGRN-KIDIYQLDNASV---F-REIE-NPKRILCATFL-DGSELLVGGDNE 229 (362)
T ss_pred ----eeccC-C--cceeeEEcCCCCEEEEEecc-EEEEEecccHhH---h-hhhh-ccccceeeeec-CCceEEEecCCc
Confidence 00011 0 11126677777776665544 478887764211 1 0111 11235555665 566899999999
Q ss_pred cEEEEEcCCCceEEEecccccceeEEEE--eCCCCEEEEEeCCCcEEEEeCCC
Q 016769 330 RVRIYNYRKGSALAILKYHHATCNAVSF--SSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~h~~~v~~v~~--spd~~~las~s~d~~i~~w~~~~ 380 (383)
.|++||.++..++..+.+|++.|.++.+ .|++.+|+|+|.||.|++||+..
T Consensus 230 ~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~ 282 (362)
T KOG0294|consen 230 WISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDM 282 (362)
T ss_pred eEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccc
Confidence 9999999999999999999999999985 57888999999999999999964
No 80
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.90 E-value=7.2e-21 Score=169.28 Aligned_cols=330 Identities=17% Similarity=0.283 Sum_probs=205.5
Q ss_pred eeecCCceeeEEEeCCCCeEEEecCCC--------eEEEeeCcccccccccccccccceeeeeeecCCCCcceeEe--cc
Q 016769 14 LRGHRASVTDVCFHQTKPILFAGTTGG--------ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVIS--QG 83 (383)
Q Consensus 14 l~gH~~~V~~v~f~~~~~~L~sgs~D~--------~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--~~ 83 (383)
+.||++.|-|++.|||.-.+++|-..| +||+||..+...+..+. ....++.+++|++..+++.+.. -+
T Consensus 100 y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g--~f~~GV~~vaFsk~~~G~~l~~vD~s 177 (626)
T KOG2106|consen 100 YLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIG--FFDRGVTCVAFSKINGGSLLCAVDDS 177 (626)
T ss_pred ccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeec--cccccceeeeecccCCCceEEEecCC
Confidence 469999999999999998999888877 49999987776666554 2345789999998755555543 47
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.+.-+.+||++.+..... ..+ .....-.+.+.. ..+........++-..|..+-+........ ..+..+.+....
T Consensus 178 ~~h~lSVWdWqk~~~~~~-vk~-sne~v~~a~FHP-td~nliit~Gk~H~~Fw~~~~~~l~k~~~~--fek~ekk~Vl~v 252 (626)
T KOG2106|consen 178 NPHMLSVWDWQKKAKLGP-VKT-SNEVVFLATFHP-TDPNLIITCGKGHLYFWTLRGGSLVKRQGI--FEKREKKFVLCV 252 (626)
T ss_pred CccccchhhchhhhccCc-cee-ccceEEEEEecc-CCCcEEEEeCCceEEEEEccCCceEEEeec--cccccceEEEEE
Confidence 788899999987643211 000 000000111111 011111111111111111111111111000 001111122222
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
.+..+|. .+.|+.+|.|.||+..+.+-..+.. .+++-++++... ..+ .+++|+.|..|.
T Consensus 253 ~F~engd---viTgDS~G~i~Iw~~~~~~~~k~~~----------aH~ggv~~L~~l------r~G--tllSGgKDRki~ 311 (626)
T KOG2106|consen 253 TFLENGD---VITGDSGGNILIWSKGTNRISKQVH----------AHDGGVFSLCML------RDG--TLLSGGKDRKII 311 (626)
T ss_pred EEcCCCC---EEeecCCceEEEEeCCCceEEeEee----------ecCCceEEEEEe------cCc--cEeecCccceEE
Confidence 3334443 3567888999999987655332222 233334443321 122 378899999999
Q ss_pred EEeCC--C------C---CC----------------------------ceeeeeccccCeEEEEEeCCCCceEEEEcCCc
Q 016769 244 VWDIR--N------P---GI----------------------------PLTAMKVHLEPVLCLSIDESCNGGISGGADQK 284 (383)
Q Consensus 244 ~wdl~--~------~---~~----------------------------~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~ 284 (383)
.||=. + + +. .....++|.+....++.+|+...+++++.|+.
T Consensus 312 ~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~ 391 (626)
T KOG2106|consen 312 LWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKH 391 (626)
T ss_pred eccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcce
Confidence 99821 0 0 00 00122467777888888999999999999999
Q ss_pred EEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEE
Q 016769 285 IVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM 364 (383)
Q Consensus 285 i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~l 364 (383)
+++|+ + .+..+.+. -...+.++.|+|.| .+|.|...|...+.|.++...+. +..-.+++++++|+|||.+|
T Consensus 392 v~lW~-~---~k~~wt~~---~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~-~~~d~~~ls~v~ysp~G~~l 462 (626)
T KOG2106|consen 392 VRLWN-D---HKLEWTKI---IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVT-IHTDNEQLSVVRYSPDGAFL 462 (626)
T ss_pred EEEcc-C---CceeEEEE---ecCceeEeeccCcc-eEEEeeccceEEEEecccceeEE-EEecCCceEEEEEcCCCCEE
Confidence 99998 2 22233222 23568899999999 99999999999999999855443 33337899999999999999
Q ss_pred EEEeCCCcEEEEeCCC
Q 016769 365 ASASEDSTVALWELYP 380 (383)
Q Consensus 365 as~s~d~~i~~w~~~~ 380 (383)
|.||.|+.|+||-++.
T Consensus 463 Avgs~d~~iyiy~Vs~ 478 (626)
T KOG2106|consen 463 AVGSHDNHIYIYRVSA 478 (626)
T ss_pred EEecCCCeEEEEEECC
Confidence 9999999999998753
No 81
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=1.5e-20 Score=158.65 Aligned_cols=247 Identities=15% Similarity=0.167 Sum_probs=171.1
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+.++.|+. +|..+++++.|.+++++|..++.... ++....+......
T Consensus 15 ~~i~sl~fs~--~G~~litss~dDsl~LYd~~~g~~~~----ti~skkyG~~~~~------------------------- 63 (311)
T KOG1446|consen 15 GKINSLDFSD--DGLLLITSSEDDSLRLYDSLSGKQVK----TINSKKYGVDLAC------------------------- 63 (311)
T ss_pred CceeEEEecC--CCCEEEEecCCCeEEEEEcCCCceee----EeecccccccEEE-------------------------
Confidence 4578899987 47889999999999999998875321 1111111000000
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEee
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAY 222 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 222 (383)
+..+....+..+.-.|.+||+=+|.+.+.+..+..+. .++..+. .
T Consensus 64 ----------------------Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~----------~~V~sL~---~ 108 (311)
T KOG1446|consen 64 ----------------------FTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHK----------KRVNSLS---V 108 (311)
T ss_pred ----------------------EecCCceEEEccCCCCCceEEEEeecCceEEEcCCCC----------ceEEEEE---e
Confidence 0011112233333346789999999999888876431 2222221 2
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee
Q 016769 223 LPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE 302 (383)
Q Consensus 223 ~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~ 302 (383)
.|.+ ..+++++.|++|++||+|.+.+ +..+. ...-...+|||+|..++++...+.|++||++....-......
T Consensus 109 sP~~----d~FlS~S~D~tvrLWDlR~~~c-qg~l~--~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~ 181 (311)
T KOG1446|consen 109 SPKD----DTFLSSSLDKTVRLWDLRVKKC-QGLLN--LSGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFS 181 (311)
T ss_pred cCCC----CeEEecccCCeEEeeEecCCCC-ceEEe--cCCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEc
Confidence 3332 2478999999999999997543 33333 223345789999999998888889999999865332222222
Q ss_pred ee-cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccce---eEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 303 IN-LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC---NAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 303 ~~-~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v---~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+. ....+.+.+.|+|||++|+.++..+.+++.|.-+|....++..|...- .+..|+||++++.+|+.||+|.+|++
T Consensus 182 i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~ 261 (311)
T KOG1446|consen 182 ITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNL 261 (311)
T ss_pred cCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEc
Confidence 22 234568899999999999999999999999999999888888777543 67789999999999999999999999
Q ss_pred CCCC
Q 016769 379 YPPH 382 (383)
Q Consensus 379 ~~~~ 382 (383)
..++
T Consensus 262 ~tg~ 265 (311)
T KOG1446|consen 262 ETGK 265 (311)
T ss_pred CCCc
Confidence 6543
No 82
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.90 E-value=8.6e-22 Score=173.22 Aligned_cols=256 Identities=20% Similarity=0.328 Sum_probs=180.3
Q ss_pred eeecCCceeeEEEeCCCC-eEEEecCCCeEEEeeCccccc----------ccccccccccceeeeeeecCCCCcceeEec
Q 016769 14 LRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT----------VSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (383)
Q Consensus 14 l~gH~~~V~~v~f~~~~~-~L~sgs~D~~v~vW~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 82 (383)
.--|.+.|+.+.+-|+.. .+||++..+.|.|||.....- -..+.+|.. ...++++.+. ....|+++
T Consensus 120 ~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~--eg~glsWn~~-~~g~Lls~ 196 (422)
T KOG0264|consen 120 KINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEK--EGYGLSWNRQ-QEGTLLSG 196 (422)
T ss_pred eccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecc--cccccccccc-cceeEeec
Confidence 347999999999998765 677888889999999754321 113445543 2455666653 34678999
Q ss_pred ccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCcccee
Q 016769 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEII 162 (383)
Q Consensus 83 ~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (383)
+.|+++++||+....... +..
T Consensus 197 ~~d~~i~lwdi~~~~~~~-~~~---------------------------------------------------------- 217 (422)
T KOG0264|consen 197 SDDHTICLWDINAESKED-KVV---------------------------------------------------------- 217 (422)
T ss_pred cCCCcEEEEeccccccCC-ccc----------------------------------------------------------
Confidence 999999999996432100 000
Q ss_pred cccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcE
Q 016769 163 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 242 (383)
Q Consensus 163 ~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i 242 (383)
.++.+. .+. ...| ..+. |.+.. ...+.+++.|+.+
T Consensus 218 ------~p~~~~-~~h-~~~V--------------------eDV~--------------~h~~h---~~lF~sv~dd~~L 252 (422)
T KOG0264|consen 218 ------DPKTIF-SGH-EDVV--------------------EDVA--------------WHPLH---EDLFGSVGDDGKL 252 (422)
T ss_pred ------cceEEe-ecC-Ccce--------------------ehhh--------------ccccc---hhhheeecCCCeE
Confidence 000000 000 0000 0000 11111 1135678899999
Q ss_pred EEEeCCC-CCCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC-
Q 016769 243 LVWDIRN-PGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS- 319 (383)
Q Consensus 243 ~~wdl~~-~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~- 319 (383)
.|||+|+ ...+....++|..++.|++|.|... .+|+||.|++|+|||++...... ..+..+...|..+.|+|..
T Consensus 253 ~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~l---h~~e~H~dev~~V~WSPh~e 329 (422)
T KOG0264|consen 253 MIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPL---HTFEGHEDEVFQVEWSPHNE 329 (422)
T ss_pred EEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCc---eeccCCCcceEEEEeCCCCC
Confidence 9999996 3445677889999999999988665 46899999999999998755321 2345677889999999976
Q ss_pred cEEEEEeCCCcEEEEEcCC--------------CceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 320 KIAATAGWDRRVRIYNYRK--------------GSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 320 ~~l~s~~~dg~i~iwd~~~--------------~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
..+|+++.|+++.+||+.. .+.+....||...|....|+|... .++|.++|+.+.||++.
T Consensus 330 tvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 330 TVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred ceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 5789999999999999954 123467789999999999999888 78999999999999875
No 83
>PTZ00421 coronin; Provisional
Probab=99.90 E-value=5e-21 Score=181.18 Aligned_cols=254 Identities=18% Similarity=0.218 Sum_probs=171.8
Q ss_pred ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccccc-------------ccccccccceeeeeeecCCCCcceeEec
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS-------------SSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 82 (383)
.|-..|+...+++|+..+++++.+.....|+...+..+. .+..| ...+.++.|+|. +++.|+++
T Consensus 18 ~~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH--~~~V~~v~fsP~-d~~~LaSg 94 (493)
T PTZ00421 18 RHFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQ--EGPIIDVAFNPF-DPQKLFTA 94 (493)
T ss_pred cceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCC--CCCEEEEEEcCC-CCCEEEEE
Confidence 455677777888998889999999999999865443221 11222 245788999884 35789999
Q ss_pred ccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCcccee
Q 016769 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEII 162 (383)
Q Consensus 83 ~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (383)
+.|++|++||+.++...... .
T Consensus 95 S~DgtIkIWdi~~~~~~~~~--------------------~--------------------------------------- 115 (493)
T PTZ00421 95 SEDGTIMGWGIPEEGLTQNI--------------------S--------------------------------------- 115 (493)
T ss_pred eCCCEEEEEecCCCcccccc--------------------C---------------------------------------
Confidence 99999999999754210000 0
Q ss_pred cccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcE
Q 016769 163 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 242 (383)
Q Consensus 163 ~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i 242 (383)
.......+ +.+.| .+ ..|.|.. ...+++|+.|++|
T Consensus 116 -------~~l~~L~g-H~~~V-------------------------------~~---l~f~P~~---~~iLaSgs~DgtV 150 (493)
T PTZ00421 116 -------DPIVHLQG-HTKKV-------------------------------GI---VSFHPSA---MNVLASAGADMVV 150 (493)
T ss_pred -------cceEEecC-CCCcE-------------------------------EE---EEeCcCC---CCEEEEEeCCCEE
Confidence 00000000 00000 00 0133321 1247889999999
Q ss_pred EEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC-CeEEEEECCCCcE
Q 016769 243 LVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP-GISGTSIRPDSKI 321 (383)
Q Consensus 243 ~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~-~i~~~~~~p~~~~ 321 (383)
+|||+++. .....+..|...|.++.|++++..+++++.|+.|++||++... .. ..+..+.+ ....+.|.+++..
T Consensus 151 rIWDl~tg-~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~--~v--~tl~~H~~~~~~~~~w~~~~~~ 225 (493)
T PTZ00421 151 NVWDVERG-KAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGT--IV--SSVEAHASAKSQRCLWAKRKDL 225 (493)
T ss_pred EEEECCCC-eEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCc--EE--EEEecCCCCcceEEEEcCCCCe
Confidence 99999874 4566778899999999999999999999999999999997543 22 12333333 2446678888777
Q ss_pred EEEEe----CCCcEEEEEcCCCc-eEEEecccc-cceeEEEEeCCCCEEEEEe-CCCcEEEEeCCCC
Q 016769 322 AATAG----WDRRVRIYNYRKGS-ALAILKYHH-ATCNAVSFSSDCKLMASAS-EDSTVALWELYPP 381 (383)
Q Consensus 322 l~s~~----~dg~i~iwd~~~~~-~~~~~~~h~-~~v~~v~~spd~~~las~s-~d~~i~~w~~~~~ 381 (383)
+++++ .|+.|++||+++.. ++.....+. ..+....|+||+++|++|+ .|+.|++||+...
T Consensus 226 ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~ 292 (493)
T PTZ00421 226 IITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNE 292 (493)
T ss_pred EEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCC
Confidence 77655 47999999998754 444443333 3456667899999988887 5999999999643
No 84
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=1.4e-20 Score=151.59 Aligned_cols=255 Identities=18% Similarity=0.215 Sum_probs=172.7
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccc-----cccccccceeeeeee--cCCCCcceeEecc-c
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS-----SWVHSAAHGIVSVAT--GPSIGLNKVISQG-R 84 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~l~s~~-~ 84 (383)
+-+-|++.|+|.||+|+|.+|+|||.|.+|++--+....+... +..|. .-+.-++| .+..++..|+++| .
T Consensus 84 r~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhd--gtirdl~fld~~~s~~~il~s~gag 161 (350)
T KOG0641|consen 84 RNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHD--GTIRDLAFLDDPESGGAILASAGAG 161 (350)
T ss_pred eccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecC--CceeeeEEecCCCcCceEEEecCCC
Confidence 4468999999999999999999999999999986654433221 11222 22333333 3444556777764 8
Q ss_pred CCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
|..|.+=|+.+|.- ...+..+..|+-.+ .+
T Consensus 162 dc~iy~tdc~~g~~----~~a~sghtghilal----------------------------------------------ys 191 (350)
T KOG0641|consen 162 DCKIYITDCGRGQG----FHALSGHTGHILAL----------------------------------------------YS 191 (350)
T ss_pred cceEEEeecCCCCc----ceeecCCcccEEEE----------------------------------------------EE
Confidence 88999988877631 11111111111000 00
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCcee-eEE--EeecCCCCCCceEEEEEeCCCc
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMC-MAV--QAYLPSKSQGFVNVLAGYEDGS 241 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~sg~~dg~ 241 (383)
. ...++++|++|.+||+|||+-..++..+....+. .++- .++ ...-|+ + ..+++|..|..
T Consensus 192 w----n~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~---------~glessavaav~vdps---g-rll~sg~~dss 254 (350)
T KOG0641|consen 192 W----NGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHD---------GGLESSAVAAVAVDPS---G-RLLASGHADSS 254 (350)
T ss_pred e----cCcEEEccCCCceEEEEeeeccceeeeccCcccC---------CCcccceeEEEEECCC---c-ceeeeccCCCc
Confidence 0 0247889999999999999998888777543221 1111 111 112222 2 35788999999
Q ss_pred EEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcE
Q 016769 242 ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 321 (383)
Q Consensus 242 i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 321 (383)
..+||++. +.++..+..|...|+|+.|+|..-++++|+.|..|++-||+..-...+-......+...+..+.|+|..-.
T Consensus 255 c~lydirg-~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~s 333 (350)
T KOG0641|consen 255 CMLYDIRG-GRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFS 333 (350)
T ss_pred eEEEEeeC-CceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccce
Confidence 99999996 56788888899999999999999999999999999999987432111111112224456778899999988
Q ss_pred EEEEeCCCcEEEEEcC
Q 016769 322 AATAGWDRRVRIYNYR 337 (383)
Q Consensus 322 l~s~~~dg~i~iwd~~ 337 (383)
+++.+.|+++.+|-+.
T Consensus 334 fisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 334 FISSSADKTATLWALN 349 (350)
T ss_pred eeeccCcceEEEeccC
Confidence 9999999999999763
No 85
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.90 E-value=1.5e-21 Score=170.68 Aligned_cols=251 Identities=24% Similarity=0.354 Sum_probs=189.4
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
.+.+|+||+..|+.+.|+|+...++++|.|..||||.+....+...+..|. ..+..+...|+ +.+|++++.|++.-
T Consensus 253 ~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~--~~V~~ls~h~t--geYllsAs~d~~w~ 328 (506)
T KOG0289|consen 253 ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHE--EPVTGLSLHPT--GEYLLSASNDGTWA 328 (506)
T ss_pred hhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCcccccccc--ccceeeeeccC--CcEEEEecCCceEE
Confidence 456899999999999999999999999999999999998877766665554 35677777774 78999999999988
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
.-|++++...
T Consensus 329 Fsd~~~g~~l---------------------------------------------------------------------- 338 (506)
T KOG0289|consen 329 FSDISSGSQL---------------------------------------------------------------------- 338 (506)
T ss_pred EEEccCCcEE----------------------------------------------------------------------
Confidence 8888765310
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
..++.. ...|-+ . ...|.|+. ..+.+|..||.|+|||+.+
T Consensus 339 ---t~vs~~-~s~v~~---------t-----------------------s~~fHpDg----Lifgtgt~d~~vkiwdlks 378 (506)
T KOG0289|consen 339 ---TVVSDE-TSDVEY---------T-----------------------SAAFHPDG----LIFGTGTPDGVVKIWDLKS 378 (506)
T ss_pred ---EEEeec-ccccee---------E-----------------------EeeEcCCc----eEEeccCCCceEEEEEcCC
Confidence 000000 000000 0 00133321 2356788999999999988
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR 329 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg 329 (383)
+. ....+.+|..+|..++|+..|-++++++.|+.|++|||+.... ++........++.++.|.+.|+|+++++.|=
T Consensus 379 ~~-~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n---~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l 454 (506)
T KOG0289|consen 379 QT-NVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKN---FKTIQLDEKKEVNSLSFDQSGTYLGIAGSDL 454 (506)
T ss_pred cc-ccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcc---cceeeccccccceeEEEcCCCCeEEeeccee
Confidence 55 4678889999999999999998899999999999999985431 1111112224699999999999999998887
Q ss_pred cEEEEEcCC--CceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 330 RVRIYNYRK--GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 330 ~i~iwd~~~--~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+|++++-.+ -..+..+.-|.+....+.|.-.-++++++|.|...+++.+
T Consensus 455 ~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 455 QVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred EEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 777777533 3456666678888999999988899999999999988865
No 86
>PTZ00420 coronin; Provisional
Probab=99.90 E-value=1.6e-20 Score=178.79 Aligned_cols=258 Identities=18% Similarity=0.189 Sum_probs=160.5
Q ss_pred EecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeee
Q 016769 35 AGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFC 114 (383)
Q Consensus 35 sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~ 114 (383)
+|+.++.+++|+......+..+..|. ..+.+++|.|. ++..|+||+.|++|++||+.++..... .+.. ..+
T Consensus 49 gGG~~gvI~L~~~~r~~~v~~L~gH~--~~V~~lafsP~-~~~lLASgS~DgtIrIWDi~t~~~~~~---~i~~---p~~ 119 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKPPVIKLKGHT--SSILDLQFNPC-FSEILASGSEDLTIRVWEIPHNDESVK---EIKD---PQC 119 (568)
T ss_pred CCCceeEEEeeecCCCceEEEEcCCC--CCEEEEEEcCC-CCCEEEEEeCCCeEEEEECCCCCcccc---cccc---ceE
Confidence 47788999999986654444444443 46889999984 357899999999999999975421000 0000 000
Q ss_pred eEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCee
Q 016769 115 KLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERC 194 (383)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~ 194 (383)
.+ ... .. ......+.+.+. .++++++.|++|++||+++++.+
T Consensus 120 --~L-~gH------------------------------~~----~V~sVaf~P~g~-~iLaSgS~DgtIrIWDl~tg~~~ 161 (568)
T PTZ00420 120 --IL-KGH------------------------------KK----KISIIDWNPMNY-YIMCSSGFDSFVNIWDIENEKRA 161 (568)
T ss_pred --Ee-ecC------------------------------CC----cEEEEEECCCCC-eEEEEEeCCCeEEEEECCCCcEE
Confidence 00 000 00 000012233333 45556677899999999998866
Q ss_pred eEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEE-----EE
Q 016769 195 TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCL-----SI 269 (383)
Q Consensus 195 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~-----~~ 269 (383)
..+... ..+.++ .|.++. ..+++++.|+.|+|||+++. ..+..+.+|...+... .|
T Consensus 162 ~~i~~~-----------~~V~Sl---swspdG----~lLat~s~D~~IrIwD~Rsg-~~i~tl~gH~g~~~s~~v~~~~f 222 (568)
T PTZ00420 162 FQINMP-----------KKLSSL---KWNIKG----NLLSGTCVGKHMHIIDPRKQ-EIASSFHIHDGGKNTKNIWIDGL 222 (568)
T ss_pred EEEecC-----------CcEEEE---EECCCC----CEEEEEecCCEEEEEECCCC-cEEEEEecccCCceeEEEEeeeE
Confidence 554321 112222 244432 25777889999999999985 4466788888764332 23
Q ss_pred eCCCCceEEEEcCC----cEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEE--
Q 016769 270 DESCNGGISGGADQ----KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA-- 343 (383)
Q Consensus 270 ~~~~~~~~s~~~d~----~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~-- 343 (383)
.+++..++++|.|+ .|+|||++.... .+....+....+.+......+++.++++|+.|++|++|++..+....
T Consensus 223 s~d~~~IlTtG~d~~~~R~VkLWDlr~~~~-pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~ 301 (568)
T PTZ00420 223 GGDDNYILSTGFSKNNMREMKLWDLKNTTS-ALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVN 301 (568)
T ss_pred cCCCCEEEEEEcCCCCccEEEEEECCCCCC-ceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeec
Confidence 46777888888774 699999985332 22222233333333444446678899999999999999997764322
Q ss_pred EecccccceeEEEEeCC
Q 016769 344 ILKYHHATCNAVSFSSD 360 (383)
Q Consensus 344 ~~~~h~~~v~~v~~spd 360 (383)
.+. +..+...++|.|+
T Consensus 302 ~~~-s~~p~~g~~f~Pk 317 (568)
T PTZ00420 302 EYK-SCSPFRSFGFLPK 317 (568)
T ss_pred ccc-cCCCccceEEccc
Confidence 222 5567888999996
No 87
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.89 E-value=2.1e-20 Score=165.84 Aligned_cols=240 Identities=27% Similarity=0.426 Sum_probs=171.0
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+.++.+.+. ++.+++++.|+.+++|+++++.. ......+.. . .
T Consensus 10 ~~i~~~~~~~~--~~~l~~~~~~g~i~i~~~~~~~~----~~~~~~~~~----------~------------i------- 54 (289)
T cd00200 10 GGVTCVAFSPD--GKLLATGSGDGTIKVWDLETGEL----LRTLKGHTG----------P------------V------- 54 (289)
T ss_pred CCEEEEEEcCC--CCEEEEeecCcEEEEEEeeCCCc----EEEEecCCc----------c------------e-------
Confidence 45788888883 67899999999999999976531 000000000 0 0
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEee
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAY 222 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 222 (383)
....+.+++ +++++ ++.++.+++||+++++.+..+..+ .....++ .+
T Consensus 55 ------------------~~~~~~~~~-~~l~~-~~~~~~i~i~~~~~~~~~~~~~~~----------~~~i~~~---~~ 101 (289)
T cd00200 55 ------------------RDVAASADG-TYLAS-GSSDKTIRLWDLETGECVRTLTGH----------TSYVSSV---AF 101 (289)
T ss_pred ------------------eEEEECCCC-CEEEE-EcCCCeEEEEEcCcccceEEEecc----------CCcEEEE---EE
Confidence 000112233 23444 455789999999887655554321 1112222 23
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee
Q 016769 223 LPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE 302 (383)
Q Consensus 223 ~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~ 302 (383)
.+. ...+++++.|+.|++||+++. .....+..|..++.++.+++.+..+++++.|+.+++||++...... .
T Consensus 102 ~~~----~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~----~ 172 (289)
T cd00200 102 SPD----GRILSSSSRDKTIKVWDVETG-KCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVA----T 172 (289)
T ss_pred cCC----CCEEEEecCCCeEEEEECCCc-EEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccce----e
Confidence 332 124566667999999999863 3456677788899999999987766777679999999997433222 2
Q ss_pred eecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 303 INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 303 ~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
...+...+.++.|+|+++.+++++.|+.|++||+..++.+..+..|...+.+++|+|++.++++++.|+.|++||+.
T Consensus 173 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~ 249 (289)
T cd00200 173 LTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLR 249 (289)
T ss_pred EecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcC
Confidence 23455579999999999999999999999999999999888888899999999999998899999999999999985
No 88
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.89 E-value=6.6e-22 Score=171.87 Aligned_cols=245 Identities=16% Similarity=0.261 Sum_probs=176.5
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
..+.+|.|-.++|+++.|.+++..+++.+.|+.+++|++.+.+....+.+|. ..+.++-|.. +...+++|+.|.|+
T Consensus 210 ~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHt--dkVt~ak~~~--~~~~vVsgs~DRti 285 (459)
T KOG0288|consen 210 ELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHT--DKVTAAKFKL--SHSRVVSGSADRTI 285 (459)
T ss_pred hhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccc--cceeeehhhc--cccceeeccccchh
Confidence 3566888999999999999999999999999999999999999888887765 3466776665 23458999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
|.||+....|..++... . .|.+ +. +.
T Consensus 286 K~WDl~k~~C~kt~l~~----------------S-----------~cnD-----------------------I~--~~-- 311 (459)
T KOG0288|consen 286 KLWDLQKAYCSKTVLPG----------------S-----------QCND-----------------------IV--CS-- 311 (459)
T ss_pred hhhhhhhhheecccccc----------------c-----------cccc-----------------------eE--ec--
Confidence 99999887654421100 0 0000 00 00
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
...+.+|-.|++||+||.++..+...++.+..+ .++. .. .+...+++++.|.++++.|++
T Consensus 312 --~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~v-------------tSl~-ls----~~g~~lLsssRDdtl~viDlR 371 (459)
T KOG0288|consen 312 --ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRV-------------TSLD-LS----MDGLELLSSSRDDTLKVIDLR 371 (459)
T ss_pred --ceeeeecccccceEEEeccCCceeeEeecCcce-------------eeEe-ec----cCCeEEeeecCCCceeeeecc
Confidence 124567778899999999998877666543222 2221 22 223468889999999999999
Q ss_pred CCCCceeeeecc----ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEE
Q 016769 249 NPGIPLTAMKVH----LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 324 (383)
Q Consensus 249 ~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s 324 (383)
+... ...+... ......+.|+|++.++++||.||.|+||++... ++............|++++|+|.|.++++
T Consensus 372 t~eI-~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tg--KlE~~l~~s~s~~aI~s~~W~~sG~~Lls 448 (459)
T KOG0288|consen 372 TKEI-RQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTG--KLEKVLSLSTSNAAITSLSWNPSGSGLLS 448 (459)
T ss_pred cccE-EEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCc--eEEEEeccCCCCcceEEEEEcCCCchhhc
Confidence 7543 3333221 124677889999999999999999999998643 33222112222236999999999999999
Q ss_pred EeCCCcEEEE
Q 016769 325 AGWDRRVRIY 334 (383)
Q Consensus 325 ~~~dg~i~iw 334 (383)
++.++.+.+|
T Consensus 449 adk~~~v~lW 458 (459)
T KOG0288|consen 449 ADKQKAVTLW 458 (459)
T ss_pred ccCCcceEec
Confidence 9999999998
No 89
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=9.5e-22 Score=179.71 Aligned_cols=304 Identities=20% Similarity=0.300 Sum_probs=203.1
Q ss_pred CCCC-eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccc--ccccccccccccceeeeeeecCCCCcceeEecc
Q 016769 7 PPDP-VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH--RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (383)
Q Consensus 7 ~~~~-~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 83 (383)
|..| .+.++.|++-|+.+..--+++.|+|+|.|.+|++|+...+ -|+..+..|. --+.+++.... +...++|||
T Consensus 61 ~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~--DYVkcla~~ak-~~~lvaSgG 137 (735)
T KOG0308|consen 61 PSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHK--DYVKCLAYIAK-NNELVASGG 137 (735)
T ss_pred cccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhccc--chheeeeeccc-CceeEEecC
Confidence 3444 7789999999999999999999999999999999998766 4555555554 23556665322 357889999
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.|+.|.+||++++.... ....... ...++. . ++...+.
T Consensus 138 LD~~IflWDin~~~~~l----~~s~n~~--t~~sl~------------------------------s------G~k~siY 175 (735)
T KOG0308|consen 138 LDRKIFLWDINTGTATL----VASFNNV--TVNSLG------------------------------S------GPKDSIY 175 (735)
T ss_pred CCccEEEEEccCcchhh----hhhcccc--ccccCC------------------------------C------CCcccee
Confidence 99999999998763100 0000000 000000 0 0111122
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
++..+....++++|+..+.+|+||-++.+.++++..+ . ..+-++-+ + .+..++++++.||+|+
T Consensus 176 SLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGH--------T--dNVr~ll~-----~--dDGt~~ls~sSDgtIr 238 (735)
T KOG0308|consen 176 SLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGH--------T--DNVRVLLV-----N--DDGTRLLSASSDGTIR 238 (735)
T ss_pred eeecCCcceEEEecCcccceEEeccccccceeeeecc--------c--cceEEEEE-----c--CCCCeEeecCCCceEE
Confidence 2222333357888888899999999999999888742 1 12222111 1 1223689999999999
Q ss_pred EEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEE
Q 016769 244 VWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAA 323 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~ 323 (383)
+||++. ..++.++..|.+.|..+..+++...+++|+.|+.|..=||..++...++- .+...+..+..+...+-+-
T Consensus 239 lWdLgq-QrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlic----k~daPv~~l~~~~~~~~~W 313 (735)
T KOG0308|consen 239 LWDLGQ-QRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLIC----KEDAPVLKLHLHEHDNSVW 313 (735)
T ss_pred eeeccc-cceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEee----cCCCchhhhhhccccCCce
Confidence 999997 45688899999999999999999999999999999999998754332221 1223455555554444457
Q ss_pred EEeCCCcEEEEEcCCCceE-------------------------EEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 324 TAGWDRRVRIYNYRKGSAL-------------------------AILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 324 s~~~dg~i~iwd~~~~~~~-------------------------~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
++++|+.|+-|-+.-...+ ..+.|- .+|..-++-.|.+++.|-...|.+.+||+
T Consensus 314 vtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg-~ai~k~~mL~dkRhVlTkDa~gnv~lwDI 392 (735)
T KOG0308|consen 314 VTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSVIPGG-AAIKKHAMLNDKRHVLTKDAKGNVALWDI 392 (735)
T ss_pred eeeccccceecCCccccccccCCCCCcccccCCCccccccCCCceeccCc-hhhhhhhhhcCcceEeeecCCCCEEEEEe
Confidence 7889999999966321100 011111 11222234457889999999999999997
No 90
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.88 E-value=8e-20 Score=171.51 Aligned_cols=339 Identities=18% Similarity=0.310 Sum_probs=202.1
Q ss_pred CCceeeEEEeCCCC-eEEEecCCCeEEEeeCcccccccccc-cccccceeeeeeecCCCCcceeEecccCCeEEEeecCC
Q 016769 18 RASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSW-VHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (383)
Q Consensus 18 ~~~V~~v~f~~~~~-~L~sgs~D~~v~vW~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~ 95 (383)
.+.|++++|.-||+ .|++|+.-|.+-+||++..+...... .|. .++....+.+ +...++|++.|+.+++|=.++
T Consensus 244 ~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~--~sv~~~~fl~--~epVl~ta~~DnSlk~~vfD~ 319 (910)
T KOG1539|consen 244 WGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHY--GSVTGATFLP--GEPVLVTAGADNSLKVWVFDS 319 (910)
T ss_pred ccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeecccc--CCcccceecC--CCceEeeccCCCceeEEEeeC
Confidence 59999999999986 78888888999999998776655443 332 3455555655 346788999999999998775
Q ss_pred CCCCC----------CCeeeeec--CceeeeeEEeeccccccccccCCCCccceeccCcccc--cCcccccc-ccCCccc
Q 016769 96 GGLSS----------NPSLTIKT--NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVD--TDSLCDSK-ESNRSFE 160 (383)
Q Consensus 96 ~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~ 160 (383)
+.-.. .|...++- .+.+++... -+.+........ ......+.+.... ........ .......
T Consensus 320 ~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa-~~Drt~r~fs~~--~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p 396 (910)
T KOG1539|consen 320 GDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSA-KQDRTLRSFSVI--SESQSQELGQLHNKKRAKKVNVFSTEKLKLP 396 (910)
T ss_pred CCCcchheeeccCCCCCchheeeeccCcEEEEec-ccCcchhhhhhh--HHHHhHhhcccccccccccccccchhhhcCC
Confidence 43211 01111111 111111100 000000000000 0000000000000 00000000 0000001
Q ss_pred eecccCCCCC-----ceeeeccCCcceEEEEecCCCCe-eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEE
Q 016769 161 IIDDVPAEGP-----KYMAVAGEQLSEVEIWDLNTAER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL 234 (383)
Q Consensus 161 ~~~~~~~~~~-----~~~~~~g~~~~~i~~Wdl~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (383)
.+..+...+. .-++++--.+..++.|+.++... ...+... .+.. ....+.++. ..+ .| ++.+
T Consensus 397 ~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~------~~~~-~~~~~~av~-vs~---CG-NF~~ 464 (910)
T KOG1539|consen 397 PIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPK------RFKK-DDINATAVC-VSF---CG-NFVF 464 (910)
T ss_pred cceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCc------cccc-cCcceEEEE-Eec---cC-ceEE
Confidence 1111111100 01222333455788899877553 2222210 0111 122333332 111 22 2577
Q ss_pred EEeCCCcEEEEeCCCCCCceeee---eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEE------------
Q 016769 235 AGYEDGSILVWDIRNPGIPLTAM---KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVI------------ 299 (383)
Q Consensus 235 sg~~dg~i~~wdl~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~------------ 299 (383)
.|+..|+|.+|++.++ .....+ +.|..+|..++.|...+.+++++.+|-+++||+....-...+
T Consensus 465 IG~S~G~Id~fNmQSG-i~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~h 543 (910)
T KOG1539|consen 465 IGYSKGTIDRFNMQSG-IHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYH 543 (910)
T ss_pred EeccCCeEEEEEcccC-eeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeee
Confidence 8999999999999874 434444 579999999999999888999999999999998654310000
Q ss_pred -------------------------eeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeE
Q 016769 300 -------------------------KKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA 354 (383)
Q Consensus 300 -------------------------~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 354 (383)
..+...+.+.|+.++|||||+.+++++.|++||+||+.++..+-.+. -..++.+
T Consensus 544 r~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~s 622 (910)
T KOG1539|consen 544 RVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTS 622 (910)
T ss_pred ehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCccee
Confidence 01233467889999999999999999999999999999999887663 5678899
Q ss_pred EEEeCCCCEEEEEeCC-CcEEEEe
Q 016769 355 VSFSSDCKLMASASED-STVALWE 377 (383)
Q Consensus 355 v~~spd~~~las~s~d-~~i~~w~ 377 (383)
+.|||+|.+|||+..| .-|++|-
T Consensus 623 ls~SPngD~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 623 LSFSPNGDFLATVHVDQNGIYLWS 646 (910)
T ss_pred eEECCCCCEEEEEEecCceEEEEE
Confidence 9999999999999999 7899994
No 91
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=6.4e-21 Score=154.44 Aligned_cols=244 Identities=15% Similarity=0.234 Sum_probs=174.9
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
.+.+..||--+|..++.+.|...+++|+.|.-|.+||+.+++....+..|. ..+-.+.|.. ....++|||-|.++|
T Consensus 51 liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~--aqVNtV~fNe--esSVv~SgsfD~s~r 126 (307)
T KOG0316|consen 51 LIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHL--AQVNTVRFNE--ESSVVASGSFDSSVR 126 (307)
T ss_pred eeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeeccccc--ceeeEEEecC--cceEEEeccccceeE
Confidence 567889999999999999999999999999999999999999888877665 3466677765 346789999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+||+..... .|.+ +
T Consensus 127 ~wDCRS~s~--ePiQ--------------------------------------------------------i-------- 140 (307)
T KOG0316|consen 127 LWDCRSRSF--EPIQ--------------------------------------------------------I-------- 140 (307)
T ss_pred EEEcccCCC--Cccc--------------------------------------------------------h--------
Confidence 999865311 0000 0
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
+. ...|+. ..+ .+ ....+++|+.||++|.||||.
T Consensus 141 ---ld--ea~D~V------------~Si--------------------~v---------~~heIvaGS~DGtvRtydiR~ 174 (307)
T KOG0316|consen 141 ---LD--EAKDGV------------SSI--------------------DV---------AEHEIVAGSVDGTVRTYDIRK 174 (307)
T ss_pred ---hh--hhcCce------------eEE--------------------Ee---------cccEEEeeccCCcEEEEEeec
Confidence 00 000100 000 00 001478899999999999998
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCC--eEEEEECCCCcEEEEEeC
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG--ISGTSIRPDSKIAATAGW 327 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~--i~~~~~~p~~~~l~s~~~ 327 (383)
+.. .......||++++|+++++..+.++-|.++++-|-+. +..+ +..+.+.+. -...+++.....+++|+.
T Consensus 175 G~l---~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~t--GklL--~sYkGhkn~eykldc~l~qsdthV~sgSE 247 (307)
T KOG0316|consen 175 GTL---SSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKET--GKLL--KSYKGHKNMEYKLDCCLNQSDTHVFSGSE 247 (307)
T ss_pred cee---ehhhcCCcceeEEecCCCCEEEEeeccceeeecccch--hHHH--HHhcccccceeeeeeeecccceeEEeccC
Confidence 532 2233456999999999999999999999999987543 2222 122222222 223456666778999999
Q ss_pred CCcEEEEEcCCCceEEEecccccc-eeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 328 DRRVRIYNYRKGSALAILKYHHAT-CNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~-v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
||++++||+.....+..+..|... |.+++++|.-..|+++.. +.+.+|-
T Consensus 248 DG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~~~ 297 (307)
T KOG0316|consen 248 DGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG-HGDLFWY 297 (307)
T ss_pred CceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC-Cceecee
Confidence 999999999999999888877776 799999997766665543 4456664
No 92
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.88 E-value=2.3e-21 Score=176.83 Aligned_cols=283 Identities=21% Similarity=0.270 Sum_probs=177.6
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccc--cccccccceeeeeeecCCCCcceeEecccCCeEEE
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS--SWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~ 90 (383)
-...|...|-.+.+-|....|++.+.|.++|+||+++.++... ..+|. ..+.+++|.+. +...|++||.||.|.|
T Consensus 95 ~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~--~SvkS~cf~~~-n~~vF~tGgRDg~ill 171 (720)
T KOG0321|consen 95 KPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHT--GSVKSECFMPT-NPAVFCTGGRDGEILL 171 (720)
T ss_pred ccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccc--cccchhhhccC-CCcceeeccCCCcEEE
Confidence 3568999999999999777999999999999999998887654 33443 46788888885 4578899999999999
Q ss_pred eecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCC
Q 016769 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGP 170 (383)
Q Consensus 91 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (383)
||+.-...-.. ..+|. ..+.+..+. ..+.+ . ....-.
T Consensus 172 WD~R~n~~d~~---------e~~~~------------------~~~~~~n~~------ptpsk-------p---~~kr~~ 208 (720)
T KOG0321|consen 172 WDCRCNGVDAL---------EEFDN------------------RIYGRHNTA------PTPSK-------P---LKKRIR 208 (720)
T ss_pred EEEeccchhhH---------HHHhh------------------hhhccccCC------CCCCc-------h---hhcccc
Confidence 99853210000 00000 000000000 00000 0 000000
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeC-CCcEEEEeCCC
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE-DGSILVWDIRN 249 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~-dg~i~~wdl~~ 249 (383)
+..+.++. | + .. +.+..|. +...|++++. |+.|+||||++
T Consensus 209 k~kA~s~t----i------------------------~-----ss-vTvv~fk-----De~tlaSaga~D~~iKVWDLRk 249 (720)
T KOG0321|consen 209 KWKAASNT----I------------------------F-----SS-VTVVLFK-----DESTLASAGAADSTIKVWDLRK 249 (720)
T ss_pred ccccccCc----e------------------------e-----ee-eEEEEEe-----ccceeeeccCCCcceEEEeecc
Confidence 11121111 0 0 00 1111121 2235777655 99999999987
Q ss_pred CCCc-----eeeeeccc-----cCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC
Q 016769 250 PGIP-----LTAMKVHL-----EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319 (383)
Q Consensus 250 ~~~~-----~~~~~~h~-----~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 319 (383)
.... ....+.|+ ..+.++..|..|.++++.+.|++|..|++..................--..-..+|++
T Consensus 250 ~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~ 329 (720)
T KOG0321|consen 250 NYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDD 329 (720)
T ss_pred cccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCC
Confidence 5432 22222232 2467788899999988888899999999875443322211111100001123468999
Q ss_pred cEEEEEeCCCcEEEEEcCCCce-EEEecccccceeEEEEeCCC-CEEEEEeCCCcEEEEeCCC
Q 016769 320 KIAATAGWDRRVRIYNYRKGSA-LAILKYHHATCNAVSFSSDC-KLMASASEDSTVALWELYP 380 (383)
Q Consensus 320 ~~l~s~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~v~~spd~-~~las~s~d~~i~~w~~~~ 380 (383)
.++++|++|...++|.+.+.+. ...+.+|...|.+|+|.|.. --+|++++|..+++|++++
T Consensus 330 ~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~ 392 (720)
T KOG0321|consen 330 CSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSN 392 (720)
T ss_pred ceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccC
Confidence 9999999999999999987654 44667999999999998743 2567779999999999964
No 93
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.88 E-value=1e-20 Score=162.15 Aligned_cols=99 Identities=16% Similarity=0.202 Sum_probs=82.7
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
..+.|+-||+|.|||+.... ++..-.|..+|..+.|.+ ..++++++.+|.|++||.+.. ..+ .....|...|.
T Consensus 300 L~A~G~vdG~i~iyD~a~~~--~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG--~l~--~~y~GH~~~Il 372 (399)
T KOG0296|consen 300 LAACGSVDGTIAIYDLAAST--LRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTG--QLK--FTYTGHQMGIL 372 (399)
T ss_pred hhhcccccceEEEEecccch--hheeccCCCceEEEEEcC-cchheeeccCceEEeeecccc--ceE--EEEecCchhee
Confidence 35678999999999998643 445556889999999988 678999999999999998654 333 34567788999
Q ss_pred EEEECCCCcEEEEEeCCCcEEEEEcC
Q 016769 312 GTSIRPDSKIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~i~iwd~~ 337 (383)
.++++|+.++++++|.|++.++|+..
T Consensus 373 ~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 373 DFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EEEEcCCCcEEEEecCCCeEEEEecC
Confidence 99999999999999999999999874
No 94
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.88 E-value=1.1e-20 Score=174.36 Aligned_cols=354 Identities=20% Similarity=0.248 Sum_probs=198.1
Q ss_pred eeeecCCceeeEEEeCCCCeEEEec--CCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccC--CeE
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGT--TGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD--GTV 88 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs--~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D--~ti 88 (383)
.+..|+.++++|+|+++|++++||= ----+|||++.....+..+..|. ..+.+++|+| ++.++++.|.. =.|
T Consensus 73 lvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEfvdHK--Y~vtcvaFsp--~~kyvvSVGsQHDMIV 148 (1080)
T KOG1408|consen 73 LVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEFVDHK--YNVTCVAFSP--GNKYVVSVGSQHDMIV 148 (1080)
T ss_pred eecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchhhhhhcc--ccceeeeecC--CCcEEEeeccccceEE
Confidence 3457889999999999999999976 33469999998877666655554 3578889988 35677776643 356
Q ss_pred EEeecCCCCCCC-CC---e---eeeec--------CceeeeeEEee--cccccc-------ccc-----------cCCCC
Q 016769 89 KCWDIENGGLSS-NP---S---LTIKT--------NSYHFCKLSLV--KEPYAN-------AKQ-----------ANEPK 133 (383)
Q Consensus 89 ~~Wd~~~~~~~~-~~---~---~~~~~--------~~~~~~~~~~~--~~~~~~-------~~~-----------~~~~~ 133 (383)
.+||+..+-... +. . ..+.. ...|.-.+.+- ++.... ... +.+..
T Consensus 149 nv~dWr~N~~~asnkiss~Vsav~fsEdgSYfvT~gnrHvk~wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~g 228 (1080)
T KOG1408|consen 149 NVNDWRVNSSGASNKISSVVSAVAFSEDGSYFVTSGNRHVKLWYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGVG 228 (1080)
T ss_pred EhhhhhhcccccccccceeEEEEEEccCCceeeeeeeeeEEEEEeeccccccCCccccchhhhccccccchhhhhhhcCc
Confidence 677664321000 00 0 00000 00111111111 000000 000 00000
Q ss_pred ----cccee-ccCcccccCc--cccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcC-C--
Q 016769 134 ----DCYER-EVGETVDTDS--LCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSC-G-- 203 (383)
Q Consensus 134 ----~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~-~-- 203 (383)
.++.+ ..|.+..++. +.+....-+. .....+.. ..+++ ..|..++.|||++.++-..+.+++.... .
T Consensus 229 icAestfait~qGhLvEFSsRRLLDKWVqcRT-TnAnCIcV-s~r~I-~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d 305 (1080)
T KOG1408|consen 229 ICAESTFAITAQGHLVEFSSRRLLDKWVQCRT-TNANCICV-SSRLI-ACGCAKGMVRLFNPETLDYAGTLPRSHALGSD 305 (1080)
T ss_pred ccccceEEEecccceeeechhhhhhhhhhhhc-cccceeee-ecceE-EEeeccceeeecCcchhhhccccccccccccc
Confidence 00111 1111111100 0000000000 00000111 12344 4567789999999888766666653211 1
Q ss_pred -CC-----CCcCC-CCC--ceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCce--eeeeccccCeEEEEEeC-
Q 016769 204 -GS-----PNFSS-KGR--GMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL--TAMKVHLEPVLCLSIDE- 271 (383)
Q Consensus 204 -~s-----~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~--~~~~~h~~~v~~~~~~~- 271 (383)
++ ..++. ... .-+++++ |-+. ...+..-+.|..+.+||++....+- ..+-.|...|..+..-|
T Consensus 306 ~a~~~q~~~~~s~~~~a~fPD~IA~~-Fdet----~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~ 380 (1080)
T KOG1408|consen 306 TANLSQPEPKNSESSPAIFPDAIACQ-FDET----TDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPC 380 (1080)
T ss_pred hhhcccccccccccCcccCCceeEEE-ecCC----CceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccc
Confidence 00 00100 000 1122222 3221 1245556899999999998754432 33445666665554322
Q ss_pred -----CC-----CceEEEEcCCcEEEEEccCCCCeeE-----Ee-------------------------ee---eecCCC
Q 016769 272 -----SC-----NGGISGGADQKIVLYNLDHSTGSCV-----IK-------------------------KE---INLERP 308 (383)
Q Consensus 272 -----~~-----~~~~s~~~d~~i~~wdl~~~~~~~~-----~~-------------------------~~---~~~~~~ 308 (383)
.. ..+.+|+.|++|++||++.-+.... +. +. ..-...
T Consensus 381 nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~ 460 (1080)
T KOG1408|consen 381 NVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRF 460 (1080)
T ss_pred cccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCccc
Confidence 11 1358999999999999975221111 00 00 001224
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeC---CCCEEEEEeCCCcEEEEeC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS---DCKLMASASEDSTVALWEL 378 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~sp---d~~~las~s~d~~i~~w~~ 378 (383)
++.+++++|++++||+|..-|+++++|+...+....+.+|+..|.|+.||- ..++||++|+|.-|+++|+
T Consensus 461 G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv 533 (1080)
T KOG1408|consen 461 GFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDV 533 (1080)
T ss_pred ceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEec
Confidence 689999999999999999999999999998888888899999999999984 2469999999999999997
No 95
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=9.2e-22 Score=170.97 Aligned_cols=250 Identities=16% Similarity=0.184 Sum_probs=168.0
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
..++|.||..+|..|.||||.++|++++.|..+++||+.++.+..... ++.+-.+.++++.| ++..+++|+.|+++.
T Consensus 261 l~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~-~~~~~S~~sc~W~p--Dg~~~V~Gs~dr~i~ 337 (519)
T KOG0293|consen 261 LKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYP-SGLGFSVSSCAWCP--DGFRFVTGSPDRTII 337 (519)
T ss_pred eeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcc-cCcCCCcceeEEcc--CCceeEecCCCCcEE
Confidence 567999999999999999999999999999999999999887655432 22234567888888 478899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
.||.+.... . .+ .-+..+. ++ -.++..+|
T Consensus 338 ~wdlDgn~~-~---------~W-----~gvr~~~-----------v~-------------------------dlait~Dg 366 (519)
T KOG0293|consen 338 MWDLDGNIL-G---------NW-----EGVRDPK-----------VH-------------------------DLAITYDG 366 (519)
T ss_pred EecCCcchh-h---------cc-----cccccce-----------eE-------------------------EEEEcCCC
Confidence 999865421 0 00 0000000 00 01123455
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
+. ++.++ .|..|++++.++......+..+. .++. +..++ +...+++.-.+..|.+||++.
T Consensus 367 k~-vl~v~-~d~~i~l~~~e~~~dr~lise~~-----------~its-----~~iS~--d~k~~LvnL~~qei~LWDl~e 426 (519)
T KOG0293|consen 367 KY-VLLVT-VDKKIRLYNREARVDRGLISEEQ-----------PITS-----FSISK--DGKLALVNLQDQEIHLWDLEE 426 (519)
T ss_pred cE-EEEEe-cccceeeechhhhhhhccccccC-----------ceeE-----EEEcC--CCcEEEEEcccCeeEEeecch
Confidence 54 44443 46789999987755432222111 1111 21122 223566777899999999985
Q ss_pred CCCceeeeeccccCe--EEEEEeCCC-CceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC-cEEEEE
Q 016769 250 PGIPLTAMKVHLEPV--LCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KIAATA 325 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v--~~~~~~~~~-~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-~~l~s~ 325 (383)
. .......+|...- ..-+|.... ..+++|+.|+.|+||+.... . ....+..|...+++++++|.. .++|+|
T Consensus 427 ~-~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sg--k--ll~~LsGHs~~vNcVswNP~~p~m~ASa 501 (519)
T KOG0293|consen 427 N-KLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISG--K--LLAVLSGHSKTVNCVSWNPADPEMFASA 501 (519)
T ss_pred h-hHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCC--c--eeEeecCCcceeeEEecCCCCHHHhhcc
Confidence 4 3345566775432 222343332 45789999999999987533 2 234567787889999999965 589999
Q ss_pred eCCCcEEEEEcCC
Q 016769 326 GWDRRVRIYNYRK 338 (383)
Q Consensus 326 ~~dg~i~iwd~~~ 338 (383)
|.||+||||-...
T Consensus 502 sDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 502 SDDGTIRIWGPSD 514 (519)
T ss_pred CCCCeEEEecCCc
Confidence 9999999998754
No 96
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=1.3e-20 Score=167.11 Aligned_cols=242 Identities=20% Similarity=0.324 Sum_probs=167.1
Q ss_pred ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCC
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~ 95 (383)
--++.|++++|-.||++|+.|.+.|.|+|+|..+...+..+..|. +.+-.+-|+|. ++..|++|++|+.+++||+.+
T Consensus 66 rFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~--apv~~~~f~~~-d~t~l~s~sDd~v~k~~d~s~ 142 (487)
T KOG0310|consen 66 RFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQ--APVHVTKFSPQ-DNTMLVSGSDDKVVKYWDLST 142 (487)
T ss_pred hhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhcc--CceeEEEeccc-CCeEEEecCCCceEEEEEcCC
Confidence 446788999999999999999999999999965533344444454 34667778874 457788999999999999987
Q ss_pred CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeee
Q 016769 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAV 175 (383)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (383)
... . ..+.. ....++ + .++.+. ..-+++
T Consensus 143 a~v------~----------~~l~~-htDYVR------------------------------~----g~~~~~-~~hivv 170 (487)
T KOG0310|consen 143 AYV------Q----------AELSG-HTDYVR------------------------------C----GDISPA-NDHIVV 170 (487)
T ss_pred cEE------E----------EEecC-CcceeE------------------------------e----eccccC-CCeEEE
Confidence 531 0 01100 000000 0 011111 123678
Q ss_pred ccCCcceEEEEecCCC-CeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCce
Q 016769 176 AGEQLSEVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 254 (383)
Q Consensus 176 ~g~~~~~i~~Wdl~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~ 254 (383)
+|+-|++||+||++.. ..+..+..+..+++ ..+.|+.. .+++++ ...|++||+.++++.+
T Consensus 171 tGsYDg~vrl~DtR~~~~~v~elnhg~pVe~--------------vl~lpsgs----~iasAg-Gn~vkVWDl~~G~qll 231 (487)
T KOG0310|consen 171 TGSYDGKVRLWDTRSLTSRVVELNHGCPVES--------------VLALPSGS----LIASAG-GNSVKVWDLTTGGQLL 231 (487)
T ss_pred ecCCCceEEEEEeccCCceeEEecCCCceee--------------EEEcCCCC----EEEEcC-CCeEEEEEecCCceeh
Confidence 8999999999999887 45555543222111 12344321 344443 5689999999877666
Q ss_pred eeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEE
Q 016769 255 TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIY 334 (383)
Q Consensus 255 ~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iw 334 (383)
..+..|+..|+|+.+..++..|++++-|+.+++||+.+.. ....++. .++|-+++++|+++.++.|-.||.+.+=
T Consensus 232 ~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~K----vv~s~~~-~~pvLsiavs~dd~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 232 TSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYK----VVHSWKY-PGPVLSIAVSPDDQTVVIGMSNGLVSIR 306 (487)
T ss_pred hhhhcccceEEEEEeecCCceEeecccccceEEEEccceE----EEEeeec-ccceeeEEecCCCceEEEecccceeeee
Confidence 6666699999999998888899999999999999975432 2222332 3679999999999999999999988765
Q ss_pred Ec
Q 016769 335 NY 336 (383)
Q Consensus 335 d~ 336 (383)
+.
T Consensus 307 r~ 308 (487)
T KOG0310|consen 307 RR 308 (487)
T ss_pred hh
Confidence 44
No 97
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=3.9e-20 Score=175.35 Aligned_cols=246 Identities=18% Similarity=0.278 Sum_probs=180.2
Q ss_pred eecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccc-ccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeec
Q 016769 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH-RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (383)
Q Consensus 15 ~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~ 93 (383)
.+|+..-+.|||.|+|..|.|++.||.||+|+.... .....+..+ ...+.+++.. .++|++++.+++|.++.+
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~--g~~v~~ia~~----s~~f~~~s~~~tv~~y~f 83 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDIS--GELVSSIACY----SNHFLTGSEQNTVLRYKF 83 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhcc--CceeEEEeec----ccceEEeeccceEEEeeC
Confidence 489999999999999999999999999999997655 333332211 1234444433 468999999999999998
Q ss_pred CCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCcee
Q 016769 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYM 173 (383)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (383)
.+++.-+. ..++.+ + -+.+
T Consensus 84 ps~~~~~i-----------L~Rftl---p-----------------------------------------------~r~~ 102 (933)
T KOG1274|consen 84 PSGEEDTI-----------LARFTL---P-----------------------------------------------IRDL 102 (933)
T ss_pred CCCCccce-----------eeeeec---c-----------------------------------------------ceEE
Confidence 76642100 000000 0 0011
Q ss_pred eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc
Q 016769 174 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 253 (383)
Q Consensus 174 ~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~ 253 (383)
++.|+ ...++.|+.|-.|++-++.....
T Consensus 103 ~v~g~---------------------------------------------------g~~iaagsdD~~vK~~~~~D~s~- 130 (933)
T KOG1274|consen 103 AVSGS---------------------------------------------------GKMIAAGSDDTAVKLLNLDDSSQ- 130 (933)
T ss_pred EEecC---------------------------------------------------CcEEEeecCceeEEEEeccccch-
Confidence 11111 11356678888888888766443
Q ss_pred eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee---cC-CCCeEEEEECCCCcEEEEEeCCC
Q 016769 254 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN---LE-RPGISGTSIRPDSKIAATAGWDR 329 (383)
Q Consensus 254 ~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~---~~-~~~i~~~~~~p~~~~l~s~~~dg 329 (383)
...+.+|.++|.++.++|.+..+++.+.||.+++||++++.....+....+ .. ...++.++|+|++..++..+.|+
T Consensus 131 ~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~ 210 (933)
T KOG1274|consen 131 EKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDN 210 (933)
T ss_pred heeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCC
Confidence 567889999999999999999999999999999999987655444432221 12 23466789999999999999999
Q ss_pred cEEEEEcCCCceEEEecc--cccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 330 RVRIYNYRKGSALAILKY--HHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~--h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.|++|+.........++. |...+.++.|+|.|+|||+++.||.|.|||..
T Consensus 211 ~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 211 TVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVD 262 (933)
T ss_pred eEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecc
Confidence 999999998888776653 44458999999999999999999999999985
No 98
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.87 E-value=1.9e-20 Score=156.90 Aligned_cols=244 Identities=20% Similarity=0.335 Sum_probs=157.0
Q ss_pred cceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccC
Q 016769 62 AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVG 141 (383)
Q Consensus 62 ~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (383)
.-.|.+++|+|. ....++.+|+|++||+|++++..... +. . .......+...
T Consensus 27 ~DsIS~l~FSP~-~~~~~~A~SWD~tVR~wevq~~g~~~-~k-----a------------------~~~~~~PvL~v--- 78 (347)
T KOG0647|consen 27 EDSISALAFSPQ-ADNLLAAGSWDGTVRIWEVQNSGQLV-PK-----A------------------QQSHDGPVLDV--- 78 (347)
T ss_pred ccchheeEeccc-cCceEEecccCCceEEEEEecCCccc-ch-----h------------------hhccCCCeEEE---
Confidence 345778999994 34566689999999999998642110 00 0 00000000110
Q ss_pred cccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEe
Q 016769 142 ETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQA 221 (383)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 221 (383)
..+.+|.+ +.+|+-|+.+++|||.+++. .++..+. +.+-++.
T Consensus 79 ----------------------~Wsddgsk--Vf~g~~Dk~~k~wDL~S~Q~-~~v~~Hd----------~pvkt~~--- 120 (347)
T KOG0647|consen 79 ----------------------CWSDDGSK--VFSGGCDKQAKLWDLASGQV-SQVAAHD----------APVKTCH--- 120 (347)
T ss_pred ----------------------EEccCCce--EEeeccCCceEEEEccCCCe-eeeeecc----------cceeEEE---
Confidence 11234433 23455689999999999863 3333211 1111111
Q ss_pred ecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee
Q 016769 222 YLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK 301 (383)
Q Consensus 222 ~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~ 301 (383)
+.+.. ....|++|+.|++||+||+|+. .++.+++.. +.+.++ |-....++.+..++.|.+|+|+.+... ++.
T Consensus 121 wv~~~--~~~cl~TGSWDKTlKfWD~R~~-~pv~t~~LP-eRvYa~--Dv~~pm~vVata~r~i~vynL~n~~te--~k~ 192 (347)
T KOG0647|consen 121 WVPGM--NYQCLVTGSWDKTLKFWDTRSS-NPVATLQLP-ERVYAA--DVLYPMAVVATAERHIAVYNLENPPTE--FKR 192 (347)
T ss_pred EecCC--CcceeEecccccceeecccCCC-Ceeeeeecc-ceeeeh--hccCceeEEEecCCcEEEEEcCCCcch--hhh
Confidence 22111 1235889999999999999974 456555542 344444 444455678889999999999654321 111
Q ss_pred eeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCC--ceEEEeccccc---------ceeEEEEeCCCCEEEEEeCC
Q 016769 302 EINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG--SALAILKYHHA---------TCNAVSFSSDCKLMASASED 370 (383)
Q Consensus 302 ~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~h~~---------~v~~v~~spd~~~las~s~d 370 (383)
....-...+++++..+|....|.|+-+|++.|..++.+ +.-.+++.|.. .|++|+|+|.-..|+|++.|
T Consensus 193 ~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsD 272 (347)
T KOG0647|consen 193 IESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSD 272 (347)
T ss_pred hcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCC
Confidence 11122346889998888887899999999999999886 33346677763 57899999988899999999
Q ss_pred CcEEEEeCC
Q 016769 371 STVALWELY 379 (383)
Q Consensus 371 ~~i~~w~~~ 379 (383)
|+..+||-.
T Consensus 273 Gtf~FWDkd 281 (347)
T KOG0647|consen 273 GTFSFWDKD 281 (347)
T ss_pred ceEEEecch
Confidence 999999863
No 99
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.87 E-value=5.8e-20 Score=169.23 Aligned_cols=299 Identities=18% Similarity=0.254 Sum_probs=197.3
Q ss_pred CeeeeeecCCceeeEEEeCCCC---eEEEecCCCeEEEeeCcccc--cccccccccccceeeeeeecCCCCcceeEec-c
Q 016769 10 PVAVLRGHRASVTDVCFHQTKP---ILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQ-G 83 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~---~L~sgs~D~~v~vW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~-~ 83 (383)
.+.++.||..+|+|+++-|..+ +++||+.|++|++|.+.... ++..+.. +...++++.. ...+.++ +
T Consensus 46 i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g----~~~~~~cv~a---~~~~~~~~~ 118 (764)
T KOG1063|consen 46 IVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQG----HCKECVCVVA---RSSVMTCKA 118 (764)
T ss_pred eEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecC----cceeEEEEEe---eeeEEEeec
Confidence 4568899999999999998876 89999999999999987332 2323222 3344444443 2333443 7
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.|+++.+||.+..+. .... ....+...... .| .
T Consensus 119 ad~~v~vw~~~~~e~-----~~~~--------~~rf~~k~~ip-------Lc---------------------------L 151 (764)
T KOG1063|consen 119 ADGTVSVWDKQQDEV-----FLLA--------VLRFEIKEAIP-------LC---------------------------L 151 (764)
T ss_pred cCceEEEeecCCCce-----eeeh--------heehhhhhHhh-------HH---------------------------H
Confidence 999999999854431 0000 00000000000 00 0
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCC--eeeEeccCc-CCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAE--RCTRLHQNS-CGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 240 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~--~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg 240 (383)
+..++.+.++.+.|+.+..|.++.-.+++ .+..+..+. .+.+..|...+. +...++++++|.
T Consensus 152 ~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~---------------~~~~laS~SQD~ 216 (764)
T KOG1063|consen 152 AALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGG---------------DDLLLASSSQDR 216 (764)
T ss_pred hhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCC---------------CcEEEEecCCce
Confidence 01123345677777777788887665443 233343322 222333322111 123578999999
Q ss_pred cEEEEeCCCCC--------------------Cce----------eeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEc
Q 016769 241 SILVWDIRNPG--------------------IPL----------TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 290 (383)
Q Consensus 241 ~i~~wdl~~~~--------------------~~~----------~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl 290 (383)
.||||.+.-.. ... ..+.+|.+.|.++.|.|.+..+++++.|+++.+|.-
T Consensus 217 yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~p 296 (764)
T KOG1063|consen 217 YIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKP 296 (764)
T ss_pred EEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEec
Confidence 99999873211 011 124589999999999999988999999999999987
Q ss_pred cCCCCeeEEeeee---ecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCC---ceEEEecccccceeEEEEeCCCCEE
Q 016769 291 DHSTGSCVIKKEI---NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG---SALAILKYHHATCNAVSFSSDCKLM 364 (383)
Q Consensus 291 ~~~~~~~~~~~~~---~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~v~~spd~~~l 364 (383)
+..++...-...+ .....+..+.-|+|++..+++-+.-|-.++|-.... .+...+.||.+.|.+|+|+|.|++|
T Consensus 297 d~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGefl 376 (764)
T KOG1063|consen 297 DENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFL 376 (764)
T ss_pred CCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEE
Confidence 6665544333222 222345778889999999999999999999983322 2345678999999999999999999
Q ss_pred EEEeCCCcEEEEe
Q 016769 365 ASASEDSTVALWE 377 (383)
Q Consensus 365 as~s~d~~i~~w~ 377 (383)
.|.|.|.+-|+|-
T Consensus 377 Lsvs~DQTTRlFa 389 (764)
T KOG1063|consen 377 LSVSLDQTTRLFA 389 (764)
T ss_pred EEeccccceeeec
Confidence 9999999999974
No 100
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87 E-value=5.1e-20 Score=154.66 Aligned_cols=260 Identities=18% Similarity=0.271 Sum_probs=160.6
Q ss_pred eecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc----cccccccccccceeeeeeecCCCCcceeEecccCCeEEE
Q 016769 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR----TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (383)
Q Consensus 15 ~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~ 90 (383)
.+|.+-|.++.|.+.|+.+||||.|++|+|||..... +....+.|. ..+..+.+-+..-|..+++++.|+|++|
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~--~Si~rV~WAhPEfGqvvA~cS~Drtv~i 87 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHD--GSIWRVVWAHPEFGQVVATCSYDRTVSI 87 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecC--CcEEEEEecCccccceEEEEecCCceee
Confidence 4899999999999999999999999999999964332 222222333 3566666654334688999999999999
Q ss_pred eecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCC
Q 016769 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGP 170 (383)
Q Consensus 91 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (383)
|.=+... ...+..++....... ..+..++++. +.+.-.
T Consensus 88 WEE~~~~--------~~~~~~~Wv~~ttl~---------DsrssV~DV~-------------------------FaP~hl 125 (361)
T KOG2445|consen 88 WEEQEKS--------EEAHGRRWVRRTTLV---------DSRSSVTDVK-------------------------FAPKHL 125 (361)
T ss_pred eeecccc--------cccccceeEEEEEee---------cCCcceeEEE-------------------------ecchhc
Confidence 9732110 000000010000000 0000000000 000000
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCC
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 250 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~ 250 (383)
... +++++.||.||||+.=.+
T Consensus 126 GLk-----------------------------------------------------------lA~~~aDG~lRIYEA~dp 146 (361)
T KOG2445|consen 126 GLK-----------------------------------------------------------LAAASADGILRIYEAPDP 146 (361)
T ss_pred ceE-----------------------------------------------------------EEEeccCcEEEEEecCCc
Confidence 112 334445555555543211
Q ss_pred CC-----ceeee-------eccccCeEEEEEeCCCC---ceEEEEcC-----CcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 251 GI-----PLTAM-------KVHLEPVLCLSIDESCN---GGISGGAD-----QKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 251 ~~-----~~~~~-------~~h~~~v~~~~~~~~~~---~~~s~~~d-----~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
.. .+..+ ..+..+..|++|+++.. .++.|+.+ +.++||..+....+.....++..+...|
T Consensus 147 ~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI 226 (361)
T KOG2445|consen 147 MNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPI 226 (361)
T ss_pred cccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcc
Confidence 00 00111 12445667888875543 23444433 3789998776554554444555667789
Q ss_pred EEEEECCCC----cEEEEEeCCCcEEEEEcCCC--------------------ceEEEecccccceeEEEEeCCCCEEEE
Q 016769 311 SGTSIRPDS----KIAATAGWDRRVRIYNYRKG--------------------SALAILKYHHATCNAVSFSSDCKLMAS 366 (383)
Q Consensus 311 ~~~~~~p~~----~~l~s~~~dg~i~iwd~~~~--------------------~~~~~~~~h~~~v~~v~~spd~~~las 366 (383)
+.++|.|+- ..||+++.|| |+||.+... +.+..+.+|...|+.+.|+--|-+|+|
T Consensus 227 ~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsS 305 (361)
T KOG2445|consen 227 RDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSS 305 (361)
T ss_pred eeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEee
Confidence 999999974 4799999999 999999631 234567889999999999999999999
Q ss_pred EeCCCcEEEEeC
Q 016769 367 ASEDSTVALWEL 378 (383)
Q Consensus 367 ~s~d~~i~~w~~ 378 (383)
.|.||+||+|..
T Consensus 306 tGdDG~VRLWka 317 (361)
T KOG2445|consen 306 TGDDGCVRLWKA 317 (361)
T ss_pred cCCCceeeehhh
Confidence 999999999965
No 101
>PTZ00420 coronin; Provisional
Probab=99.87 E-value=8.5e-20 Score=173.86 Aligned_cols=183 Identities=16% Similarity=0.217 Sum_probs=138.6
Q ss_pred ccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC---
Q 016769 176 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI--- 252 (383)
Q Consensus 176 ~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~--- 252 (383)
+|+..+.+++|++.+...+..+.. +.+.+.++ .|.|.. ...+++|+.|++|++||+.+...
T Consensus 49 gGG~~gvI~L~~~~r~~~v~~L~g----------H~~~V~~l---afsP~~---~~lLASgS~DgtIrIWDi~t~~~~~~ 112 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKPPVIKLKG----------HTSSILDL---QFNPCF---SEILASGSEDLTIRVWEIPHNDESVK 112 (568)
T ss_pred CCCceeEEEeeecCCCceEEEEcC----------CCCCEEEE---EEcCCC---CCEEEEEeCCCeEEEEECCCCCcccc
Confidence 466678999999877655555542 12233333 244431 12588999999999999975421
Q ss_pred ----ceeeeeccccCeEEEEEeCCCCce-EEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC
Q 016769 253 ----PLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW 327 (383)
Q Consensus 253 ----~~~~~~~h~~~v~~~~~~~~~~~~-~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~ 327 (383)
++..+.+|...|.++.|+|.+..+ ++++.|+.|++||+........ +. +...+.+++|+|+|++|++++.
T Consensus 113 ~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~----i~-~~~~V~SlswspdG~lLat~s~ 187 (568)
T PTZ00420 113 EIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQ----IN-MPKKLSSLKWNIKGNLLSGTCV 187 (568)
T ss_pred ccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEE----Ee-cCCcEEEEEECCCCCEEEEEec
Confidence 344677899999999999988754 6889999999999976542221 22 2357999999999999999999
Q ss_pred CCcEEEEEcCCCceEEEeccccccee-----EEEEeCCCCEEEEEeCCC----cEEEEeCC
Q 016769 328 DRRVRIYNYRKGSALAILKYHHATCN-----AVSFSSDCKLMASASEDS----TVALWELY 379 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~v~-----~v~~spd~~~las~s~d~----~i~~w~~~ 379 (383)
|++|+|||+++++.+..+.+|.+.+. ...|+|++++|++++.|+ .|+|||+.
T Consensus 188 D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr 248 (568)
T PTZ00420 188 GKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLK 248 (568)
T ss_pred CCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECC
Confidence 99999999999999989999987543 334678999999988775 79999986
No 102
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.86 E-value=1.6e-20 Score=167.55 Aligned_cols=260 Identities=20% Similarity=0.285 Sum_probs=166.8
Q ss_pred eeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcc
Q 016769 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET 143 (383)
Q Consensus 64 ~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (383)
.|.++++.|+ |.+|+|||.|-+|++||++.-.. .++ ++..+. + |
T Consensus 169 ~Vsal~~Dp~--GaR~~sGs~Dy~v~~wDf~gMda------s~~----~fr~l~--------------P--~-------- 212 (641)
T KOG0772|consen 169 IVSALAVDPS--GARFVSGSLDYTVKFWDFQGMDA------SMR----SFRQLQ--------------P--C-------- 212 (641)
T ss_pred EEEEeeecCC--CceeeeccccceEEEEecccccc------cch----hhhccC--------------c--c--------
Confidence 4667788874 78999999999999999964321 000 000000 0 0
Q ss_pred cccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeec
Q 016769 144 VDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYL 223 (383)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 223 (383)
..+...+...++.+..+|+++|+. ..+|.|-.-......+..+.+...+.- +++.+.-+....+.
T Consensus 213 ------------E~h~i~sl~ys~Tg~~iLvvsg~a--qakl~DRdG~~~~e~~KGDQYI~Dm~n-TKGHia~lt~g~wh 277 (641)
T KOG0772|consen 213 ------------ETHQINSLQYSVTGDQILVVSGSA--QAKLLDRDGFEIVEFSKGDQYIRDMYN-TKGHIAELTCGCWH 277 (641)
T ss_pred ------------cccccceeeecCCCCeEEEEecCc--ceeEEccCCceeeeeeccchhhhhhhc-cCCceeeeeccccc
Confidence 001111223456667788888764 688888544333333444333332221 23333222333466
Q ss_pred CCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeec-----cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeE
Q 016769 224 PSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV-----HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV 298 (383)
Q Consensus 224 ~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~ 298 (383)
|.+.+ .+++++.||++|+||+.+...-+.+++. ..-++...+|++++..+++|+.||.|.+|+....+....
T Consensus 278 P~~k~---~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~ 354 (641)
T KOG0772|consen 278 PDNKE---EFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPV 354 (641)
T ss_pred cCccc---ceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccc
Confidence 65433 5789999999999999876544444442 234788899999999999999999999999865443322
Q ss_pred EeeeeecCC--CCeEEEEECCCCcEEEEEeCCCcEEEEEcCCC-ceEEEeccc--ccceeEEEEeCCCCEEEEEeC----
Q 016769 299 IKKEINLER--PGISGTSIRPDSKIAATAGWDRRVRIYNYRKG-SALAILKYH--HATCNAVSFSSDCKLMASASE---- 369 (383)
Q Consensus 299 ~~~~~~~~~--~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~h--~~~v~~v~~spd~~~las~s~---- 369 (383)
. .....|. ..|++++|++||++|++=+.|+++++||++.. +++....+- ..+-..++||||.+++++|..
T Consensus 355 ~-~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~ 433 (641)
T KOG0772|consen 355 M-KVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNG 433 (641)
T ss_pred e-EeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCC
Confidence 2 1122333 48999999999999999999999999999764 444433332 224466789999999998753
Q ss_pred --CCcEEEEeC
Q 016769 370 --DSTVALWEL 378 (383)
Q Consensus 370 --d~~i~~w~~ 378 (383)
-+++.+||-
T Consensus 434 ~~~g~L~f~d~ 444 (641)
T KOG0772|consen 434 MTAGTLFFFDR 444 (641)
T ss_pred CCCceEEEEec
Confidence 345666654
No 103
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=2.1e-19 Score=148.48 Aligned_cols=190 Identities=17% Similarity=0.320 Sum_probs=146.5
Q ss_pred eeeccCCcceEEEEecCCCCe-eeE--eccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAER-CTR--LHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~-~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
++++++.|+.||+|++..+.. .++ +.. . ++ +..+ . .++.|.. ..|++++.|.++-||.-..
T Consensus 29 ilAscg~Dk~vriw~~~~~~s~~ck~vld~-~--------hk-rsVR-s-vAwsp~g----~~La~aSFD~t~~Iw~k~~ 92 (312)
T KOG0645|consen 29 ILASCGTDKAVRIWSTSSGDSWTCKTVLDD-G--------HK-RSVR-S-VAWSPHG----RYLASASFDATVVIWKKED 92 (312)
T ss_pred EEEeecCCceEEEEecCCCCcEEEEEeccc-c--------ch-heee-e-eeecCCC----cEEEEeeccceEEEeecCC
Confidence 567778899999999974332 111 211 0 11 1111 1 1344442 3688999999999997443
Q ss_pred C-CCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC
Q 016769 250 P-GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD 328 (383)
Q Consensus 250 ~-~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d 328 (383)
. ..++.++.+|...|.+++|++++.+|++|+.|+.+=+|.++... .......+..|...|..+.|+|....|+++|+|
T Consensus 93 ~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~dedd-Efec~aVL~~HtqDVK~V~WHPt~dlL~S~SYD 171 (312)
T KOG0645|consen 93 GEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDD-EFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYD 171 (312)
T ss_pred CceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCC-cEEEEeeeccccccccEEEEcCCcceeEEeccC
Confidence 2 24678899999999999999999999999999999999987433 222233455677789999999999999999999
Q ss_pred CcEEEEEcCC---CceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 329 RRVRIYNYRK---GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 329 g~i~iwd~~~---~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+|++|+-.. -....++.+|...|++++|+|.|..|++++.|++|+||.++
T Consensus 172 nTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~ 225 (312)
T KOG0645|consen 172 NTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLY 225 (312)
T ss_pred CeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeec
Confidence 9999998763 35678899999999999999999999999999999999854
No 104
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.86 E-value=8.9e-19 Score=157.85 Aligned_cols=272 Identities=14% Similarity=0.102 Sum_probs=168.7
Q ss_pred CCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCccee-EecccCCeEEEeecCCCCCCCCCeeeeec
Q 016769 30 KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIENGGLSSNPSLTIKT 108 (383)
Q Consensus 30 ~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~ 108 (383)
+++++|++.|+.|++||..+++.+..+..+. .+..+.++++ +..+ ++++.|+++++||..+++... .+..
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~---~~~~l~~~~d--g~~l~~~~~~~~~v~~~d~~~~~~~~----~~~~ 71 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQ---RPRGITLSKD--GKLLYVCASDSDTIQVIDLATGEVIG----TLPS 71 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCC---CCCceEECCC--CCEEEEEECCCCeEEEEECCCCcEEE----eccC
Confidence 3578899999999999998777655543222 2445777773 4555 677889999999987653210 0000
Q ss_pred CceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEec
Q 016769 109 NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDL 188 (383)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl 188 (383)
.. . .....+.++++ .+++++..++.+++||+
T Consensus 72 -------------~~-------~----------------------------~~~~~~~~~g~-~l~~~~~~~~~l~~~d~ 102 (300)
T TIGR03866 72 -------------GP-------D----------------------------PELFALHPNGK-ILYIANEDDNLVTVIDI 102 (300)
T ss_pred -------------CC-------C----------------------------ccEEEECCCCC-EEEEEcCCCCeEEEEEC
Confidence 00 0 00011234443 45555566789999999
Q ss_pred CCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC-cEEEEeCCCCCCceeeeeccccCeEEE
Q 016769 189 NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG-SILVWDIRNPGIPLTAMKVHLEPVLCL 267 (383)
Q Consensus 189 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg-~i~~wdl~~~~~~~~~~~~h~~~v~~~ 267 (383)
++.+.+..+..... . . .+ .+.|+. ..++++..++ .+.+||.++.. ....+.. ......+
T Consensus 103 ~~~~~~~~~~~~~~-------~--~--~~---~~~~dg----~~l~~~~~~~~~~~~~d~~~~~-~~~~~~~-~~~~~~~ 162 (300)
T TIGR03866 103 ETRKVLAEIPVGVE-------P--E--GM---AVSPDG----KIVVNTSETTNMAHFIDTKTYE-IVDNVLV-DQRPRFA 162 (300)
T ss_pred CCCeEEeEeeCCCC-------c--c--eE---EECCCC----CEEEEEecCCCeEEEEeCCCCe-EEEEEEc-CCCccEE
Confidence 98776655532110 0 0 11 233322 2355565554 56778987632 2222222 2345678
Q ss_pred EEeCCCCceEE-EEcCCcEEEEEccCCCCeeEEeeeeec---CCCCeEEEEECCCCcEEEE-EeCCCcEEEEEcCCCceE
Q 016769 268 SIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKKEINL---ERPGISGTSIRPDSKIAAT-AGWDRRVRIYNYRKGSAL 342 (383)
Q Consensus 268 ~~~~~~~~~~s-~~~d~~i~~wdl~~~~~~~~~~~~~~~---~~~~i~~~~~~p~~~~l~s-~~~dg~i~iwd~~~~~~~ 342 (383)
.|++++..++. +..++.|.+||++.......+...... .......++|+|++++++. .+.++++.+||+.+++..
T Consensus 163 ~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~ 242 (300)
T TIGR03866 163 EFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVL 242 (300)
T ss_pred EECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEE
Confidence 89998887754 446999999999754321111111000 1112346889999997544 456778999999988877
Q ss_pred EEecccccceeEEEEeCCCCEEEEE-eCCCcEEEEeCCC
Q 016769 343 AILKYHHATCNAVSFSSDCKLMASA-SEDSTVALWELYP 380 (383)
Q Consensus 343 ~~~~~h~~~v~~v~~spd~~~las~-s~d~~i~~w~~~~ 380 (383)
..+. +...+.+++|+|+|++|+++ +.++.|++||+..
T Consensus 243 ~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~ 280 (300)
T TIGR03866 243 DYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAA 280 (300)
T ss_pred EEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCC
Confidence 6553 45578999999999998876 5699999999864
No 105
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.86 E-value=3.4e-20 Score=163.40 Aligned_cols=244 Identities=17% Similarity=0.258 Sum_probs=162.3
Q ss_pred eecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecC
Q 016769 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (383)
Q Consensus 15 ~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~ 94 (383)
++|...|.+++.++||++|+||+.|..|.||+..+.+.+..+.+|. ..|.+++|-. +.+.+++++.|.++++|+++
T Consensus 199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr--~~V~~L~fr~--gt~~lys~s~Drsvkvw~~~ 274 (479)
T KOG0299|consen 199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHR--GAVSSLAFRK--GTSELYSASADRSVKVWSID 274 (479)
T ss_pred ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccc--cceeeeeeec--CccceeeeecCCceEEEehh
Confidence 5999999999999999999999999999999999888877766665 3467777765 45789999999999999997
Q ss_pred CCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceee
Q 016769 95 NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMA 174 (383)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (383)
...... +++. |. ..+.+++.-+..-++
T Consensus 275 ~~s~ve----tlyG---Hq----------------------------------------------d~v~~IdaL~reR~v 301 (479)
T KOG0299|consen 275 QLSYVE----TLYG---HQ----------------------------------------------DGVLGIDALSRERCV 301 (479)
T ss_pred HhHHHH----HHhC---Cc----------------------------------------------cceeeechhcccceE
Confidence 532110 0000 00 000111111122356
Q ss_pred eccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCce
Q 016769 175 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 254 (383)
Q Consensus 175 ~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~ 254 (383)
.+|+.|+++|+|++....++..... .+..-|.+ |+.+ .++++|+.||.|.+|++-+.. |+
T Consensus 302 tVGgrDrT~rlwKi~eesqlifrg~-----------~~sidcv~---~In~-----~HfvsGSdnG~IaLWs~~KKk-pl 361 (479)
T KOG0299|consen 302 TVGGRDRTVRLWKIPEESQLIFRGG-----------EGSIDCVA---FIND-----EHFVSGSDNGSIALWSLLKKK-PL 361 (479)
T ss_pred EeccccceeEEEeccccceeeeeCC-----------CCCeeeEE---Eecc-----cceeeccCCceEEEeeecccC-ce
Confidence 6777899999999965554433221 12223333 3322 268999999999999987643 33
Q ss_pred eee-ecc-----------ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEE
Q 016769 255 TAM-KVH-----------LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 322 (383)
Q Consensus 255 ~~~-~~h-----------~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l 322 (383)
.+. ..| ...|++++.-+..+.+++|+.+|.+++|-+...-....+...+. -.+-|++++|+++|+.+
T Consensus 362 f~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~i 440 (479)
T KOG0299|consen 362 FTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRI 440 (479)
T ss_pred eEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEE
Confidence 222 122 12678888888888899999999999999876533222222222 22458999999999954
Q ss_pred EE-EeCCCcEEEEEc
Q 016769 323 AT-AGWDRRVRIYNY 336 (383)
Q Consensus 323 ~s-~~~dg~i~iwd~ 336 (383)
++ .+...++--|-.
T Consensus 441 vagiGkEhRlGRW~~ 455 (479)
T KOG0299|consen 441 VAGIGKEHRLGRWWC 455 (479)
T ss_pred EEecccccccceeeE
Confidence 44 445555544433
No 106
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=6.2e-20 Score=161.79 Aligned_cols=287 Identities=22% Similarity=0.346 Sum_probs=191.2
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc--cccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCC
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~ 95 (383)
.+.|++|.|||..++|++++.|++++++.+.... .+..+ |...-.+.+..|.|. +...++++|....+..||+++
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~--~l~~fPi~~a~f~p~-G~~~i~~s~rrky~ysyDle~ 289 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSI--HLEKFPIQKAEFAPN-GHSVIFTSGRRKYLYSYDLET 289 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheee--eeccCccceeeecCC-CceEEEecccceEEEEeeccc
Confidence 5799999999999999999999999999986543 23332 222234677788884 334788999999999999988
Q ss_pred CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeee
Q 016769 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAV 175 (383)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (383)
.+.... +.++.. + ....+.|.+ ++++ ++++.
T Consensus 290 ak~~k~------------------~~~~g~-------------e-------------~~~~e~FeV----Shd~-~fia~ 320 (514)
T KOG2055|consen 290 AKVTKL------------------KPPYGV-------------E-------------EKSMERFEV----SHDS-NFIAI 320 (514)
T ss_pred cccccc------------------cCCCCc-------------c-------------cchhheeEe----cCCC-CeEEE
Confidence 753210 001100 0 000011111 2333 36666
Q ss_pred ccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCcee
Q 016769 176 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 255 (383)
Q Consensus 176 ~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~ 255 (383)
.|. .|.|.|=-..+++.+..+..+..+.... |. +.+ ..+++++.+|.|.+||+++..+ +.
T Consensus 321 ~G~-~G~I~lLhakT~eli~s~KieG~v~~~~--------------fs---Sds-k~l~~~~~~GeV~v~nl~~~~~-~~ 380 (514)
T KOG2055|consen 321 AGN-NGHIHLLHAKTKELITSFKIEGVVSDFT--------------FS---SDS-KELLASGGTGEVYVWNLRQNSC-LH 380 (514)
T ss_pred ccc-CceEEeehhhhhhhhheeeeccEEeeEE--------------Ee---cCC-cEEEEEcCCceEEEEecCCcce-EE
Confidence 654 5788887777777777776543222111 22 122 3577778899999999998643 44
Q ss_pred eeeccccCe--EEEEEeCCCCceEEEEcCCcEEEEEccCC---CCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC--C
Q 016769 256 AMKVHLEPV--LCLSIDESCNGGISGGADQKIVLYNLDHS---TGSCVIKKEINLERPGISGTSIRPDSKIAATAGW--D 328 (383)
Q Consensus 256 ~~~~h~~~v--~~~~~~~~~~~~~s~~~d~~i~~wdl~~~---~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~--d 328 (383)
.+.. .+.| ..++.+..+.++++|+..|-|.|||.++- +.+.-+ +.+..-...|+.+.|+||.+.||.+|. +
T Consensus 381 rf~D-~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPi-k~~dNLtt~Itsl~Fn~d~qiLAiaS~~~k 458 (514)
T KOG2055|consen 381 RFVD-DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPI-KTVDNLTTAITSLQFNHDAQILAIASRVKK 458 (514)
T ss_pred EEee-cCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCch-hhhhhhheeeeeeeeCcchhhhhhhhhccc
Confidence 3332 2233 44555677788999999999999996531 100000 111122346899999999998887774 6
Q ss_pred CcEEEEEcCCCceEEEec---ccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 329 RRVRIYNYRKGSALAILK---YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 329 g~i~iwd~~~~~~~~~~~---~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
..+|+-.+.+......+. .--..|.|++|||.+.+||.|..+|.|.+|.+
T Consensus 459 nalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL 511 (514)
T KOG2055|consen 459 NALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKL 511 (514)
T ss_pred cceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEee
Confidence 789999988776665443 23456899999999999999999999999987
No 107
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.85 E-value=3.5e-20 Score=172.66 Aligned_cols=284 Identities=20% Similarity=0.308 Sum_probs=186.7
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccc---ccc--ceeeeeeecCCCCcceeEecccCCeEEEee
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH---SAA--HGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd 92 (383)
....++|+..++-..|+.+|.. .++|+.............. ... ..+.-+.++ .+..+.+++++..|.|.+||
T Consensus 39 k~~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~-~~~~NlIAT~s~nG~i~vWd 116 (839)
T KOG0269|consen 39 KAKANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWG-QLYSNLIATCSTNGVISVWD 116 (839)
T ss_pred ccccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccc-cchhhhheeecCCCcEEEEe
Confidence 3556677888888777766544 5777775432111111000 000 112233444 34567889999999999999
Q ss_pred cCCCCCCCCCeeee---ecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 93 IENGGLSSNPSLTI---KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 93 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+... ++++.... +..+.+ + .++....
T Consensus 117 lnk~--~rnk~l~~f~EH~Rs~~----------------------~---------------------------ldfh~te 145 (839)
T KOG0269|consen 117 LNKS--IRNKLLTVFNEHERSAN----------------------K---------------------------LDFHSTE 145 (839)
T ss_pred cCcc--ccchhhhHhhhhcccee----------------------e---------------------------eeeccCC
Confidence 9753 11111100 000000 0 0111111
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCc-CCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNS-CGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
..++++|++|++|++||++..+...+...++ .+..+ .|.|.. + ..++++++.|.+++||||
T Consensus 146 -p~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV--------------~fsp~~--~-~~F~s~~dsG~lqlWDlR 207 (839)
T KOG0269|consen 146 -PNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDV--------------KFSPGY--G-NKFASIHDSGYLQLWDLR 207 (839)
T ss_pred -ccEEEecCCCceEEEEeeecccccccccccchhhhce--------------eeccCC--C-ceEEEecCCceEEEeecc
Confidence 2467889999999999999877554443321 11111 244432 1 247789999999999999
Q ss_pred CCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEE-EEEe-
Q 016769 249 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA-ATAG- 326 (383)
Q Consensus 249 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l-~s~~- 326 (383)
.+..+...+..|+++|.|+.++|....+++||.|+.|+|||+.......+.. +. ....+..+.|.|..++. |+++
T Consensus 208 qp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~t--In-Tiapv~rVkWRP~~~~hLAtcsm 284 (839)
T KOG0269|consen 208 QPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHT--IN-TIAPVGRVKWRPARSYHLATCSM 284 (839)
T ss_pred CchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeE--Ee-ecceeeeeeeccCccchhhhhhc
Confidence 9988888889999999999999998899999999999999997543322221 11 23568899999998764 4333
Q ss_pred -CCCcEEEEEcCCCc-eEEEecccccceeEEEEeC-CCCEEEEEeCCCcEEE
Q 016769 327 -WDRRVRIYNYRKGS-ALAILKYHHATCNAVSFSS-DCKLMASASEDSTVAL 375 (383)
Q Consensus 327 -~dg~i~iwd~~~~~-~~~~~~~h~~~v~~v~~sp-d~~~las~s~d~~i~~ 375 (383)
.|-.|+|||++.+. +..++..|..-+..++|-. |-..|-++|.|++|..
T Consensus 285 v~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~q 336 (839)
T KOG0269|consen 285 VVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQ 336 (839)
T ss_pred cccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHH
Confidence 48899999998765 4567888999999999943 4558899999998743
No 108
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.85 E-value=3.1e-19 Score=157.25 Aligned_cols=301 Identities=17% Similarity=0.257 Sum_probs=189.3
Q ss_pred CeeeeeecCCceeeEEEeCCC--CeEEEecCCCeEEEeeCccccc-c-cccccccccceeeeeeecCCCCcceeEecccC
Q 016769 10 PVAVLRGHRASVTDVCFHQTK--PILFAGTTGGELRIWDTVQHRT-V-SSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~--~~L~sgs~D~~v~vW~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
+..+.+-|.+.|++++|||-. +++|+|..-|+|=+||+..... . .....+.+...|-++.|.|. +..++++.|.|
T Consensus 178 ~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~-n~s~i~ssSyD 256 (498)
T KOG4328|consen 178 ILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPA-NTSQIYSSSYD 256 (498)
T ss_pred ecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCC-ChhheeeeccC
Confidence 345677899999999999965 5899999999999999942221 1 11222334456788899985 45789999999
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
||||+-|++++.... .........-+ . ..++
T Consensus 257 GtiR~~D~~~~i~e~--v~s~~~d~~~f----------------------------------------------s-~~d~ 287 (498)
T KOG4328|consen 257 GTIRLQDFEGNISEE--VLSLDTDNIWF----------------------------------------------S-SLDF 287 (498)
T ss_pred ceeeeeeecchhhHH--HhhcCccceee----------------------------------------------e-eccc
Confidence 999999998652100 00000000000 0 0111
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCe-eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
+.+.+ .+ +.+++-|...+||++++.. ...+.. ++.++-.++ +.|.. ...+++++.|++++|
T Consensus 288 ~~e~~-~v-l~~~~~G~f~~iD~R~~~s~~~~~~l----------h~kKI~sv~---~NP~~---p~~laT~s~D~T~kI 349 (498)
T KOG4328|consen 288 SAESR-SV-LFGDNVGNFNVIDLRTDGSEYENLRL----------HKKKITSVA---LNPVC---PWFLATASLDQTAKI 349 (498)
T ss_pred cCCCc-cE-EEeecccceEEEEeecCCccchhhhh----------hhcccceee---cCCCC---chheeecccCcceee
Confidence 22222 12 2344456889999988663 222211 111221222 22221 225889999999999
Q ss_pred EeCCCC---CCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEcc----CCCCeeEEeeeeecCC-CCeEEEEEC
Q 016769 245 WDIRNP---GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD----HSTGSCVIKKEINLER-PGISGTSIR 316 (383)
Q Consensus 245 wdl~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~----~~~~~~~~~~~~~~~~-~~i~~~~~~ 316 (383)
||+|+- ..|+...-.|..+|.+..|+|++..+++.+.|..|+|||-. .....+.+...-.... -......|.
T Consensus 350 WD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~ 429 (498)
T KOG4328|consen 350 WDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWD 429 (498)
T ss_pred eehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcccccccchhheeC
Confidence 999752 11333344689999999999999999999999999999973 1111111111000000 023456799
Q ss_pred CCCcEEEEEeCCCcEEEEEcCCCceEEEec-ccccceeEE-EEeCCCC-EEEEEeCCCcEEEEeC
Q 016769 317 PDSKIAATAGWDRRVRIYNYRKGSALAILK-YHHATCNAV-SFSSDCK-LMASASEDSTVALWEL 378 (383)
Q Consensus 317 p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~v-~~spd~~-~las~s~d~~i~~w~~ 378 (383)
|+..+|++|-.-+.|-+||-..++.+..+- .....|.++ +|+|-+. ++|-++.-|.|.||.-
T Consensus 430 P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~ 494 (498)
T KOG4328|consen 430 PDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTN 494 (498)
T ss_pred CCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEEEec
Confidence 999999999999999999998777564432 222344444 7999887 6666777888888853
No 109
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=2.7e-19 Score=171.73 Aligned_cols=303 Identities=21% Similarity=0.351 Sum_probs=195.3
Q ss_pred eeeEEEeCCCCeEEEecCCCeEEEeeCccccccccccccc-ccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCC
Q 016769 21 VTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS-AAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLS 99 (383)
Q Consensus 21 V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~ 99 (383)
=..+.|+|-.+.++++.+-..|+|||.+.++++.....+. ....+..+.+....+...+++++.||.||||+--...-
T Consensus 1067 pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~- 1145 (1387)
T KOG1517|consen 1067 PKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW- 1145 (1387)
T ss_pred CceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccccc-
Confidence 3457899999999998888899999998888765443222 23456677776655567889999999999998421100
Q ss_pred CCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCC
Q 016769 100 SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQ 179 (383)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 179 (383)
.++.+. + .+........ . .+..+ ...+.. .....+.++|+
T Consensus 1146 ~~~eLV--T------aw~~Ls~~~~---~--------~r~~~------~v~dWq--------------Q~~G~Ll~tGd- 1185 (1387)
T KOG1517|consen 1146 KKPELV--T------AWSSLSDQLP---G--------ARGTG------LVVDWQ--------------QQSGHLLVTGD- 1185 (1387)
T ss_pred CCceeE--E------eeccccccCc---c--------CCCCC------eeeehh--------------hhCCeEEecCC-
Confidence 011100 0 0000000000 0 00000 000000 01134666665
Q ss_pred cceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC--ceeee
Q 016769 180 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI--PLTAM 257 (383)
Q Consensus 180 ~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~--~~~~~ 257 (383)
.+.|||||.+..+.+..++-.. ..... .+..+...+ ..+++|..||.|++||.|.... .+...
T Consensus 1186 ~r~IRIWDa~~E~~~~diP~~s-----------~t~vT---aLS~~~~~g-n~i~AGfaDGsvRvyD~R~a~~ds~v~~~ 1250 (1387)
T KOG1517|consen 1186 VRSIRIWDAHKEQVVADIPYGS-----------STLVT---ALSADLVHG-NIIAAGFADGSVRVYDRRMAPPDSLVCVY 1250 (1387)
T ss_pred eeEEEEEecccceeEeecccCC-----------Cccce---eecccccCC-ceEEEeecCCceEEeecccCCccccceee
Confidence 6899999999988776664321 00111 122222222 2578899999999999987543 45566
Q ss_pred eccccC--eEEEEEeCCCCc-eEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC-CeEEEEECCCCcEEEEEeCCCcEEE
Q 016769 258 KVHLEP--VLCLSIDESCNG-GISGGADQKIVLYNLDHSTGSCVIKKEINLERP-GISGTSIRPDSKIAATAGWDRRVRI 333 (383)
Q Consensus 258 ~~h~~~--v~~~~~~~~~~~-~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~s~~~dg~i~i 333 (383)
+.|+.. |..+.+.+.+.. +++|+.||.|++||++.......+.-....+.+ ..+++.+|+....+|+|+. +.|+|
T Consensus 1251 R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikI 1329 (1387)
T KOG1517|consen 1251 REHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKI 1329 (1387)
T ss_pred cccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEE
Confidence 778876 999999876665 899999999999999864221111111111112 3899999999999999998 99999
Q ss_pred EEcCCCceEEEeccc-------ccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 334 YNYRKGSALAILKYH-------HATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 334 wd~~~~~~~~~~~~h-------~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
|++. |+.+..++.+ ...+.|++|||---+||.|+.|.+|.||.-.++
T Consensus 1330 y~~~-G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1330 YSLS-GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred EecC-hhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCc
Confidence 9994 4444444332 235699999998889999999999999987655
No 110
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.85 E-value=2.6e-19 Score=147.71 Aligned_cols=256 Identities=19% Similarity=0.251 Sum_probs=160.7
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEe-----cccC
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVIS-----QGRD 85 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-----~~~D 85 (383)
+.+++||++.|+|+..+.+.+.|+|||+|.+++|||+++++++...... ..+..+.|+. ++++++. -+.-
T Consensus 45 lGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~---~~Vk~~~F~~--~gn~~l~~tD~~mg~~ 119 (327)
T KOG0643|consen 45 LGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTN---SPVKRVDFSF--GGNLILASTDKQMGYT 119 (327)
T ss_pred eeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecC---CeeEEEeecc--CCcEEEEEehhhcCcc
Confidence 4578999999999999999999999999999999999999988775432 3567778887 4555443 2455
Q ss_pred CeEEEeecCCCCC---CCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCcccee
Q 016769 86 GTVKCWDIENGGL---SSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEII 162 (383)
Q Consensus 86 ~ti~~Wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (383)
+.|.++|++.... ...|...+.... + . ...
T Consensus 120 ~~v~~fdi~~~~~~~~s~ep~~kI~t~~--------------------s--k-------------------------it~ 152 (327)
T KOG0643|consen 120 CFVSVFDIRDDSSDIDSEEPYLKIPTPD--------------------S--K-------------------------ITS 152 (327)
T ss_pred eEEEEEEccCChhhhcccCceEEecCCc--------------------c--c-------------------------eee
Confidence 7788888864321 000111110000 0 0 000
Q ss_pred cccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcE
Q 016769 163 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 242 (383)
Q Consensus 163 ~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i 242 (383)
...++-+ +++ ++|..++.|..||+++++.+..-.+. +...-.-+ .+.+ +...+++++.|.+-
T Consensus 153 a~Wg~l~-~~i-i~Ghe~G~is~~da~~g~~~v~s~~~-------h~~~Ind~-----q~s~----d~T~FiT~s~Dtta 214 (327)
T KOG0643|consen 153 ALWGPLG-ETI-IAGHEDGSISIYDARTGKELVDSDEE-------HSSKINDL-----QFSR----DRTYFITGSKDTTA 214 (327)
T ss_pred eeecccC-CEE-EEecCCCcEEEEEcccCceeeechhh-------hccccccc-----cccC----CcceEEecccCccc
Confidence 0011112 344 45677899999999998754332211 11110111 1222 23368899999999
Q ss_pred EEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEe----------eeeecCCCCeEE
Q 016769 243 LVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIK----------KEINLERPGISG 312 (383)
Q Consensus 243 ~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~----------~~~~~~~~~i~~ 312 (383)
++||.++- ..++++. ...||++.++.|..+.++.||....--+=......++...+ ...+.|-+.|++
T Consensus 215 kl~D~~tl-~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINs 292 (327)
T KOG0643|consen 215 KLVDVRTL-EVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINS 292 (327)
T ss_pred eeeeccce-eeEEEee-ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcce
Confidence 99998862 2333332 34699999999988877666544333222222222211110 123456678999
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~ 338 (383)
++|+|+|+..++|+.||.||+.-.+.
T Consensus 293 vAfhPdGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 293 VAFHPDGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred eEECCCCcccccCCCCceEEEEEecc
Confidence 99999999999999999999976543
No 111
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.85 E-value=4e-19 Score=171.58 Aligned_cols=269 Identities=19% Similarity=0.234 Sum_probs=182.3
Q ss_pred eeeecC-CceeeEEEeCCCCeEEEec--CCCeEEEeeCcccc-------c-cc-cc-ccccccceeeeeeecCCCCccee
Q 016769 13 VLRGHR-ASVTDVCFHQTKPILFAGT--TGGELRIWDTVQHR-------T-VS-SS-WVHSAAHGIVSVATGPSIGLNKV 79 (383)
Q Consensus 13 ~l~gH~-~~V~~v~f~~~~~~L~sgs--~D~~v~vW~~~~~~-------~-~~-~~-~~~~~~~~~~~~~~~~~~~~~~l 79 (383)
.+-+|. ..|.+|..||||..++||+ .|+.+++|+...-- . +. .+ ....+-..+-|+.|++ ++.+|
T Consensus 7 ~wv~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~--dG~~l 84 (942)
T KOG0973|consen 7 TWVNHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSP--DGSYL 84 (942)
T ss_pred cccccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECC--CCCeE
Confidence 345665 6789999999999999999 99999999853210 0 00 00 0112234678888998 57999
Q ss_pred EecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCcc
Q 016769 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSF 159 (383)
Q Consensus 80 ~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (383)
++||.|..|.+|...... ....
T Consensus 85 AsGSDD~~v~iW~~~~~~--~~~~-------------------------------------------------------- 106 (942)
T KOG0973|consen 85 ASGSDDRLVMIWERAEIG--SGTV-------------------------------------------------------- 106 (942)
T ss_pred eeccCcceEEEeeecccC--Cccc--------------------------------------------------------
Confidence 999999999999875310 0000
Q ss_pred ceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCc-CCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeC
Q 016769 160 EIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNS-CGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 238 (383)
Q Consensus 160 ~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~ 238 (383)
|... |.. ..+.=| ++...+..+. .+..+ .+.|+. ..+++++.
T Consensus 107 -----fgs~--------g~~-~~vE~w-----k~~~~l~~H~~DV~Dv--------------~Wsp~~----~~lvS~s~ 149 (942)
T KOG0973|consen 107 -----FGST--------GGA-KNVESW-----KVVSILRGHDSDVLDV--------------NWSPDD----SLLVSVSL 149 (942)
T ss_pred -----cccc--------ccc-ccccee-----eEEEEEecCCCcccee--------------ccCCCc----cEEEEecc
Confidence 0000 000 000001 1111111100 00000 133321 25889999
Q ss_pred CCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCC------------------------
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST------------------------ 294 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~------------------------ 294 (383)
|++|.+||.++. ..++.+.+|...|..++|||.++++++-+.|++|++|...+-+
T Consensus 150 DnsViiwn~~tF-~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWS 228 (942)
T KOG0973|consen 150 DNSVIIWNAKTF-ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWS 228 (942)
T ss_pred cceEEEEccccc-eeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccC
Confidence 999999999886 6688999999999999999999999999999999999954311
Q ss_pred --CeeEE----------------------eeeeecCCCCeEEEEECCC-----Cc------------EEEEEeCCCcEEE
Q 016769 295 --GSCVI----------------------KKEINLERPGISGTSIRPD-----SK------------IAATAGWDRRVRI 333 (383)
Q Consensus 295 --~~~~~----------------------~~~~~~~~~~i~~~~~~p~-----~~------------~l~s~~~dg~i~i 333 (383)
+.++. ...+-.|...+.+++|+|- .+ .+|+|+.|++|.|
T Consensus 229 PDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSV 308 (942)
T KOG0973|consen 229 PDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSV 308 (942)
T ss_pred CCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEE
Confidence 00000 0123346677889999861 11 6899999999999
Q ss_pred EEcCCCceEEEecc-cccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 334 YNYRKGSALAILKY-HHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 334 wd~~~~~~~~~~~~-h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
|.....+++..... -...|..++|+|||..|..+|.||+|.+..+.
T Consensus 309 W~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fe 355 (942)
T KOG0973|consen 309 WNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFE 355 (942)
T ss_pred EecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcc
Confidence 99988888754432 34679999999999999999999999999874
No 112
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.84 E-value=2.6e-20 Score=159.62 Aligned_cols=250 Identities=16% Similarity=0.264 Sum_probs=170.0
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
...+|+.|.+.|+.|+++. ..++|+|.|.+|+.|-.... ....+... ..+..+.... .++.++|+|.+ |.
T Consensus 101 ~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~-p~~tilg~---s~~~gIdh~~--~~~~FaTcGe~--i~ 170 (433)
T KOG0268|consen 101 CIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDGP-PLHTILGK---SVYLGIDHHR--KNSVFATCGEQ--ID 170 (433)
T ss_pred hhheeecccCceeeEEecc--cceEEecCCcceeeeeccCC-cceeeecc---cccccccccc--ccccccccCce--ee
Confidence 4568999999999999987 67999999999999997642 22222111 1122232222 34678888875 89
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
|||.+.. +|...+.-+ ..... ...+.+..
T Consensus 171 IWD~~R~----~Pv~smswG---~Dti~--------------------------------------------svkfNpvE 199 (433)
T KOG0268|consen 171 IWDEQRD----NPVSSMSWG---ADSIS--------------------------------------------SVKFNPVE 199 (433)
T ss_pred ecccccC----CccceeecC---CCcee--------------------------------------------EEecCCCc
Confidence 9998643 222211110 00000 00011111
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
+ .+++++..|+.|-|+|+++...+.++..... .... .+.|+ .+ ++++|.+|..+..||++.
T Consensus 200 T-sILas~~sDrsIvLyD~R~~~Pl~KVi~~mR---------TN~I-----swnPe---af-nF~~a~ED~nlY~~DmR~ 260 (433)
T KOG0268|consen 200 T-SILASCASDRSIVLYDLRQASPLKKVILTMR---------TNTI-----CWNPE---AF-NFVAANEDHNLYTYDMRN 260 (433)
T ss_pred c-hheeeeccCCceEEEecccCCccceeeeecc---------ccce-----ecCcc---cc-ceeeccccccceehhhhh
Confidence 2 2445555688999999999988766643211 1111 24442 22 467899999999999998
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR 329 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg 329 (383)
-..++...+.|..+|..+.|+|.|+.+++||.|.+|+||..+....+-.. .......|.++.|+-|.+|++|||.|+
T Consensus 261 l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiY---htkRMq~V~~Vk~S~Dskyi~SGSdd~ 337 (433)
T KOG0268|consen 261 LSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIY---HTKRMQHVFCVKYSMDSKYIISGSDDG 337 (433)
T ss_pred hcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhh---hHhhhheeeEEEEeccccEEEecCCCc
Confidence 78888889999999999999999999999999999999998754322111 111234699999999999999999999
Q ss_pred cEEEEEcCCCceE
Q 016769 330 RVRIYNYRKGSAL 342 (383)
Q Consensus 330 ~i~iwd~~~~~~~ 342 (383)
.||+|.....+.+
T Consensus 338 nvRlWka~Asekl 350 (433)
T KOG0268|consen 338 NVRLWKAKASEKL 350 (433)
T ss_pred ceeeeecchhhhc
Confidence 9999988654443
No 113
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.84 E-value=1.3e-19 Score=159.49 Aligned_cols=199 Identities=19% Similarity=0.268 Sum_probs=142.2
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEeccCcCCCC--CCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGS--PNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
..+++++...+.+.|||..+............+.- ..+...+.+++ +. .+....+++|+.|++|++||+.
T Consensus 137 p~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~gls-----Wn---~~~~g~Lls~~~d~~i~lwdi~ 208 (422)
T KOG0264|consen 137 PNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLS-----WN---RQQEGTLLSGSDDHTICLWDIN 208 (422)
T ss_pred CcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccc-----cc---cccceeEeeccCCCcEEEEecc
Confidence 34566677778999999866432111100000000 01111122222 11 1223479999999999999996
Q ss_pred CCC------CceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC-c
Q 016769 249 NPG------IPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-K 320 (383)
Q Consensus 249 ~~~------~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-~ 320 (383)
... .+...+.+|...|..++|++... .+.+++.|+.+.|||++..+. ......+.+...+++++|+|-+ .
T Consensus 209 ~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~--~~~~~~~ah~~~vn~~~fnp~~~~ 286 (422)
T KOG0264|consen 209 AESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTS--KPSHSVKAHSAEVNCVAFNPFNEF 286 (422)
T ss_pred ccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCC--CCcccccccCCceeEEEeCCCCCc
Confidence 532 24566789999999999977654 467899999999999985211 1123456678899999999865 5
Q ss_pred EEEEEeCCCcEEEEEcCCC-ceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 321 IAATAGWDRRVRIYNYRKG-SALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 321 ~l~s~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
.||+||.|++|++||++.. +++.++.+|...|..|.|||... .|||++.|+.+.+||+.
T Consensus 287 ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls 347 (422)
T KOG0264|consen 287 ILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLS 347 (422)
T ss_pred eEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecc
Confidence 7888889999999999874 56788999999999999999876 89999999999999985
No 114
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.84 E-value=4.4e-19 Score=157.92 Aligned_cols=283 Identities=17% Similarity=0.277 Sum_probs=195.9
Q ss_pred eecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc---cccccccccccceeeeeeecCCCCcceeEecccCCeEEEe
Q 016769 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (383)
Q Consensus 15 ~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~W 91 (383)
..|-+-|.+++.+...+.++||+.. -|+|||+.... .+..+..-....-+.++-+.+ +++.|++||.-.|+.||
T Consensus 416 L~HGEvVcAvtIS~~trhVyTgGkg-cVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~p--dgrtLivGGeastlsiW 492 (705)
T KOG0639|consen 416 LAHGEVVCAVTISNPTRHVYTGGKG-CVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLP--DGRTLIVGGEASTLSIW 492 (705)
T ss_pred hccCcEEEEEEecCCcceeEecCCC-eEEEeeccCCCCCCccccccccCcccceeeeEecC--CCceEEeccccceeeee
Confidence 3799999999999999999998765 57999986432 122222212222344555566 57899999999999999
Q ss_pred ecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCc
Q 016769 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPK 171 (383)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (383)
|+..+.. .++ .... ...-.|+... .+++.+
T Consensus 493 DLAapTp------rik-------------aelt-----ssapaCyALa-------------------------~spDak- 522 (705)
T KOG0639|consen 493 DLAAPTP------RIK-------------AELT-----SSAPACYALA-------------------------ISPDAK- 522 (705)
T ss_pred eccCCCc------chh-------------hhcC-----Ccchhhhhhh-------------------------cCCccc-
Confidence 9976521 110 0000 0001122111 122222
Q ss_pred eeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
.++ +...||.|+||||.+...+.+++.+..+ .-|+.+ .. +...+-+|+-|.+||-||++...
T Consensus 523 vcF-sccsdGnI~vwDLhnq~~VrqfqGhtDG----------ascIdi---s~----dGtklWTGGlDntvRcWDlregr 584 (705)
T KOG0639|consen 523 VCF-SCCSDGNIAVWDLHNQTLVRQFQGHTDG----------ASCIDI---SK----DGTKLWTGGLDNTVRCWDLREGR 584 (705)
T ss_pred eee-eeccCCcEEEEEcccceeeecccCCCCC----------ceeEEe---cC----CCceeecCCCccceeehhhhhhh
Confidence 222 2345789999999998888887653211 122222 11 12257899999999999999854
Q ss_pred Cceeeeecc--ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC
Q 016769 252 IPLTAMKVH--LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR 329 (383)
Q Consensus 252 ~~~~~~~~h--~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg 329 (383)
.+ +.| ...|.++...|.+..++.|=..+.+.+-...... +..+..+.+-|-++.|.+.|+.+++.+.|.
T Consensus 585 ql----qqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~-----kyqlhlheScVLSlKFa~cGkwfvStGkDn 655 (705)
T KOG0639|consen 585 QL----QQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE-----KYQLHLHESCVLSLKFAYCGKWFVSTGKDN 655 (705)
T ss_pred hh----hhhhhhhhheecccCCCccceeeecccCcEEEEecCCcc-----ceeecccccEEEEEEecccCceeeecCchh
Confidence 32 233 4578889999999999999888877776554332 223445666789999999999999999999
Q ss_pred cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 330 RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
-+..|....|..+...+ ....|.+..+|.|.++++|||.|....+|.+
T Consensus 656 lLnawrtPyGasiFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 656 LLNAWRTPYGASIFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred hhhhccCccccceeecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 99999999998876553 5568999999999999999999999988875
No 115
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.83 E-value=3.7e-19 Score=164.04 Aligned_cols=179 Identities=21% Similarity=0.298 Sum_probs=141.1
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCC
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 250 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~ 250 (383)
+..++.|+.|..+.+|.+.+..++..+..+ +..+.|.+. . + ...+++|++|.++++|-+.+
T Consensus 71 ~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH----------~snVC~ls~-----~--~-~~~~iSgSWD~TakvW~~~~- 131 (745)
T KOG0301|consen 71 KGRLVVGGMDTTIIVFKLSQAEPLYTLKGH----------KSNVCSLSI-----G--E-DGTLISGSWDSTAKVWRIGE- 131 (745)
T ss_pred CcceEeecccceEEEEecCCCCchhhhhcc----------ccceeeeec-----C--C-cCceEecccccceEEecchh-
Confidence 445677888999999999888877666532 223333221 1 1 12389999999999997654
Q ss_pred CCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCc
Q 016769 251 GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRR 330 (383)
Q Consensus 251 ~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~ 330 (383)
+...+++|+.+|..+..-+.. .+++|+.|.+|++|.-+ + ..+.+..|..-|+++++-+++. |+|++.||.
T Consensus 132 --l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~~--~----~l~tf~gHtD~VRgL~vl~~~~-flScsNDg~ 201 (745)
T KOG0301|consen 132 --LVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKGG--T----LLKTFSGHTDCVRGLAVLDDSH-FLSCSNDGS 201 (745)
T ss_pred --hhcccCCcchheeeeeecCCC-cEEeccCcceeeeccCC--c----hhhhhccchhheeeeEEecCCC-eEeecCCce
Confidence 344589999999999887776 67999999999999532 1 1234566778899999997764 688999999
Q ss_pred EEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 331 VRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 331 i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
|++|++ +++.+..+-+|++.|.+++..+++..++|+++|+++++|+..
T Consensus 202 Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 202 IRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred EEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC
Confidence 999999 788898999999999999977888899999999999999863
No 116
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.83 E-value=7.1e-19 Score=155.38 Aligned_cols=238 Identities=16% Similarity=0.216 Sum_probs=167.5
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCC
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~ 97 (383)
.++|.|++-+|+|.+|+.|...|.+.+|.+.+++.+..+..|- ..+.++.|+. ++..++|||.||.|.+|.+-+-
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHY--Q~ITcL~fs~--dgs~iiTgskDg~V~vW~l~~l- 155 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHY--QSITCLKFSD--DGSHIITGSKDGAVLVWLLTDL- 155 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhc--cceeEEEEeC--CCcEEEecCCCccEEEEEEEee-
Confidence 4679999999999999999899999999999999887765554 4688999986 5799999999999999997321
Q ss_pred CCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeecc
Q 016769 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAG 177 (383)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 177 (383)
+..... ...+.+..-
T Consensus 156 ---------------------v~a~~~-------------------------------------------~~~~p~~~f- 170 (476)
T KOG0646|consen 156 ---------------------VSADND-------------------------------------------HSVKPLHIF- 170 (476)
T ss_pred ---------------------cccccC-------------------------------------------CCccceeee-
Confidence 000000 000000000
Q ss_pred CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeee
Q 016769 178 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 257 (383)
Q Consensus 178 ~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~ 257 (383)
++.++-|-|+.-+ + .....++++.+.|.++|+||+..+ ..+.++
T Consensus 171 -~~HtlsITDl~ig------------------------------~----Gg~~~rl~TaS~D~t~k~wdlS~g-~LLlti 214 (476)
T KOG0646|consen 171 -SDHTLSITDLQIG------------------------------S----GGTNARLYTASEDRTIKLWDLSLG-VLLLTI 214 (476)
T ss_pred -ccCcceeEEEEec------------------------------C----CCccceEEEecCCceEEEEEeccc-eeeEEE
Confidence 0112222221100 0 001126889999999999999874 334333
Q ss_pred eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCee------------EEeeeeecCCC--CeEEEEECCCCcEEE
Q 016769 258 KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC------------VIKKEINLERP--GISGTSIRPDSKIAA 323 (383)
Q Consensus 258 ~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~------------~~~~~~~~~~~--~i~~~~~~p~~~~l~ 323 (383)
. .-.++.++.+||....++.|+.+|.|.+.++..-.+.. ........+.+ .|++++++-||..++
T Consensus 215 ~-fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLl 293 (476)
T KOG0646|consen 215 T-FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLL 293 (476)
T ss_pred e-cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEE
Confidence 3 23578899999999999999999999988775432111 11112334444 899999999999999
Q ss_pred EEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC
Q 016769 324 TAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK 362 (383)
Q Consensus 324 s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~ 362 (383)
+|+.||++.|||+.+.+.++++....++|+-+.+.|--+
T Consensus 294 SGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~~~ 332 (476)
T KOG0646|consen 294 SGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPLER 332 (476)
T ss_pred eeCCCCCEEEEecchHHHHHHHhhhccccceeEeecccc
Confidence 999999999999999988888766678888888866433
No 117
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.83 E-value=3.2e-19 Score=145.36 Aligned_cols=253 Identities=19% Similarity=0.255 Sum_probs=168.5
Q ss_pred eeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccc---ccccccccccccceeeeeeec-CCCCcceeEecccCCeEE
Q 016769 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH---RTVSSSWVHSAAHGIVSVATG-PSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 14 l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~s~~~D~ti~ 89 (383)
-.+|.+.|-.+...=-|+.|||+|.|++|||+.+.+. +.+..+.+|. ..+..+++- |. .++.|+|++.|+.|-
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~--GPVwqv~wahPk-~G~iLAScsYDgkVI 83 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHS--GPVWKVAWAHPK-FGTILASCSYDGKVI 83 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCC--CCeeEEeecccc-cCcEeeEeecCceEE
Confidence 4588999888777777999999999999999998654 3455666665 345555554 33 468999999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
||.-+++.-.... .+..|
T Consensus 84 iWke~~g~w~k~~-----e~~~h--------------------------------------------------------- 101 (299)
T KOG1332|consen 84 IWKEENGRWTKAY-----EHAAH--------------------------------------------------------- 101 (299)
T ss_pred EEecCCCchhhhh-----hhhhh---------------------------------------------------------
Confidence 9997766311000 00000
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
.++ .+.| .+.+...++ .|+.++.||.|.|.+.+.
T Consensus 102 ------~~S-VNsV-----------------------~wapheygl----------------~LacasSDG~vsvl~~~~ 135 (299)
T KOG1332|consen 102 ------SAS-VNSV-----------------------AWAPHEYGL----------------LLACASSDGKVSVLTYDS 135 (299)
T ss_pred ------ccc-ceee-----------------------cccccccce----------------EEEEeeCCCcEEEEEEcC
Confidence 000 0000 011111111 244566677777777665
Q ss_pred CCC-c-eeeeeccccCeEEEEEeCC---C-----------CceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEE
Q 016769 250 PGI-P-LTAMKVHLEPVLCLSIDES---C-----------NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGT 313 (383)
Q Consensus 250 ~~~-~-~~~~~~h~~~v~~~~~~~~---~-----------~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~ 313 (383)
.+. . -+..+.|..-|+++++.|. + ..|++||.|+.|+||+.+..+ ..+...+..|..-++.+
T Consensus 136 ~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~--w~~e~~l~~H~dwVRDV 213 (299)
T KOG1332|consen 136 SGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDS--WKLERTLEGHKDWVRDV 213 (299)
T ss_pred CCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcc--hhhhhhhhhcchhhhhh
Confidence 421 1 1223567777777777554 2 348999999999999987642 23333456677789999
Q ss_pred EECCCC----cEEEEEeCCCcEEEEEcCCC-ce--EEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 314 SIRPDS----KIAATAGWDRRVRIYNYRKG-SA--LAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 314 ~~~p~~----~~l~s~~~dg~i~iwd~~~~-~~--~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++.|.- .+||+++.||++.||-.+.- ++ ...+......+..+.||+.|..|+.++.|+.|.+|.-.
T Consensus 214 AwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 214 AWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred hhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 998864 47999999999999988521 11 11223345679999999999999999999999999753
No 118
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.83 E-value=1.5e-18 Score=153.32 Aligned_cols=186 Identities=19% Similarity=0.337 Sum_probs=139.7
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC---
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN--- 249 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~--- 249 (383)
++++|.-.+.+++|.+.++..+..+..+. ..+-| ..|.- +...+++|+.||.|.+|++..
T Consensus 95 ~l~ag~i~g~lYlWelssG~LL~v~~aHY----------Q~ITc---L~fs~----dgs~iiTgskDg~V~vW~l~~lv~ 157 (476)
T KOG0646|consen 95 FLLAGTISGNLYLWELSSGILLNVLSAHY----------QSITC---LKFSD----DGSHIITGSKDGAVLVWLLTDLVS 157 (476)
T ss_pred EEEeecccCcEEEEEeccccHHHHHHhhc----------cceeE---EEEeC----CCcEEEecCCCccEEEEEEEeecc
Confidence 34445445789999999999776553221 11112 22332 223689999999999998631
Q ss_pred -----CCCceeeeeccccCeEEEEEeCC--CCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEE
Q 016769 250 -----PGIPLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 322 (383)
Q Consensus 250 -----~~~~~~~~~~h~~~v~~~~~~~~--~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l 322 (383)
...|+..+..|+-+|..+.+... ..+++++|.|.++++||+... ..++... ....+.++++.|-++.+
T Consensus 158 a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g--~LLlti~---fp~si~av~lDpae~~~ 232 (476)
T KOG0646|consen 158 ADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLG--VLLLTIT---FPSSIKAVALDPAERVV 232 (476)
T ss_pred cccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccc--eeeEEEe---cCCcceeEEEcccccEE
Confidence 23467788899999999988554 346899999999999999643 3332221 23568999999999999
Q ss_pred EEEeCCCcEEEEEcCCC----------------ceEEEeccccc--ceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 323 ATAGWDRRVRIYNYRKG----------------SALAILKYHHA--TCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 323 ~s~~~dg~i~iwd~~~~----------------~~~~~~~~h~~--~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.+|+.+|+|.+.++... ..+..+.||.+ +|.|++++-||..|++|+.||.|.|||++.
T Consensus 233 yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S 308 (476)
T KOG0646|consen 233 YIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYS 308 (476)
T ss_pred EecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecch
Confidence 99999999999988432 23456778988 999999999999999999999999999863
No 119
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.83 E-value=8.5e-20 Score=149.19 Aligned_cols=143 Identities=14% Similarity=0.234 Sum_probs=119.7
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
++++|+.++.+|+||++.+..+...+.+|...|..+.|....+.+++...|++||+||....+....+ .. ...++
T Consensus 114 ~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL----~~-~s~Vt 188 (334)
T KOG0278|consen 114 YLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSL----EF-NSPVT 188 (334)
T ss_pred hhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEE----ec-CCCCc
Confidence 57899999999999999888777888899999999999888788899899999999999866543322 21 24689
Q ss_pred EEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 312 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
++.++++|++|.. ...+.|.+||..+-..++.++ -+-.|.+..++|+...+++|++|+.++.||....
T Consensus 189 SlEvs~dG~ilTi-a~gssV~Fwdaksf~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~Tg 256 (334)
T KOG0278|consen 189 SLEVSQDGRILTI-AYGSSVKFWDAKSFGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTG 256 (334)
T ss_pred ceeeccCCCEEEE-ecCceeEEeccccccceeecc-CccccccccccCCCceEEecCcceEEEEEeccCC
Confidence 9999999988665 567789999999988887775 3446899999999999999999999999998643
No 120
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.82 E-value=1.6e-20 Score=158.78 Aligned_cols=150 Identities=25% Similarity=0.396 Sum_probs=129.0
Q ss_pred ecCCCCCCceEEEEEeCCCcEEEEeCCCCCC-------ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCC
Q 016769 222 YLPSKSQGFVNVLAGYEDGSILVWDIRNPGI-------PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 294 (383)
Q Consensus 222 ~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~ 294 (383)
|+|+. .++++|+.||-|.+||..+++. ....+.++..+|.|+.|+.+...+++|+.||.|++|.+....
T Consensus 221 FSPDg----qyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ 296 (508)
T KOG0275|consen 221 FSPDG----QYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQ 296 (508)
T ss_pred eCCCC----ceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecch
Confidence 55653 3689999999999999866431 123455678899999999988889999999999999997655
Q ss_pred CeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEE
Q 016769 295 GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVA 374 (383)
Q Consensus 295 ~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~ 374 (383)
+...+ -..|..+++++.|+.|+..+.+++.|.++|+--+.+|+.++.++||...|+.+.|.+||.+++++|.||+|+
T Consensus 297 ClRrF---drAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvk 373 (508)
T KOG0275|consen 297 CLRRF---DRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVK 373 (508)
T ss_pred HHHHh---hhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEE
Confidence 43322 235667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeC
Q 016769 375 LWEL 378 (383)
Q Consensus 375 ~w~~ 378 (383)
+|+.
T Consensus 374 vW~~ 377 (508)
T KOG0275|consen 374 VWHG 377 (508)
T ss_pred EecC
Confidence 9986
No 121
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.82 E-value=7.3e-19 Score=165.72 Aligned_cols=217 Identities=18% Similarity=0.212 Sum_probs=139.5
Q ss_pred CCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
++|++.|.||++.|+.|.||.++ +|+|+|+|.+||||.+....|+... .| ...|+|++|.|. ++++|+||+.|+.
T Consensus 359 ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F-~H--ndfVTcVaFnPv-DDryFiSGSLD~K 433 (712)
T KOG0283|consen 359 EKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVF-SH--NDFVTCVAFNPV-DDRYFISGSLDGK 433 (712)
T ss_pred ccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEE-ec--CCeeEEEEeccc-CCCcEeecccccc
Confidence 34778899999999999999875 9999999999999999877777543 33 357999999996 6799999999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
+|||++...+... +.-.. . ..-...+.|
T Consensus 434 vRiWsI~d~~Vv~---------------W~Dl~--~-----------------------------------lITAvcy~P 461 (712)
T KOG0283|consen 434 VRLWSISDKKVVD---------------WNDLR--D-----------------------------------LITAVCYSP 461 (712)
T ss_pred eEEeecCcCeeEe---------------ehhhh--h-----------------------------------hheeEEecc
Confidence 9999986532100 00000 0 000011223
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
+|+ + ++.|.-+|.+++|+.+..+.. + +..|.+-.
T Consensus 462 dGk-~-avIGt~~G~C~fY~t~~lk~~----------------------~---------------------~~~I~~~~- 495 (712)
T KOG0283|consen 462 DGK-G-AVIGTFNGYCRFYDTEGLKLV----------------------S---------------------DFHIRLHN- 495 (712)
T ss_pred CCc-e-EEEEEeccEEEEEEccCCeEE----------------------E---------------------eeeEeecc-
Confidence 332 2 333455556665554332100 0 11111110
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG 326 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~ 326 (383)
+ +.. .|. .|+.+.+.+... .+++.+.|.+|+|+|++...-.+.++... ....-....|+.||++|++++
T Consensus 496 -~-----Kk~-~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~--n~~SQ~~Asfs~Dgk~IVs~s 565 (712)
T KOG0283|consen 496 -K-----KKK-QGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFR--NTSSQISASFSSDGKHIVSAS 565 (712)
T ss_pred -C-----ccc-cCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccc--cCCcceeeeEccCCCEEEEee
Confidence 0 011 122 688888865433 47888999999999996544333332211 122345678999999999999
Q ss_pred CCCcEEEEEcC
Q 016769 327 WDRRVRIYNYR 337 (383)
Q Consensus 327 ~dg~i~iwd~~ 337 (383)
.|..|++|+.+
T Consensus 566 eDs~VYiW~~~ 576 (712)
T KOG0283|consen 566 EDSWVYIWKND 576 (712)
T ss_pred cCceEEEEeCC
Confidence 99999999984
No 122
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.82 E-value=2.3e-18 Score=141.75 Aligned_cols=237 Identities=19% Similarity=0.194 Sum_probs=157.7
Q ss_pred eeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcc
Q 016769 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET 143 (383)
Q Consensus 64 ~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (383)
.+.++++.. ++.+|++++.|+++++|+++....... ...+ .|. ..+
T Consensus 22 ~v~Sv~wn~--~g~~lasgs~dktv~v~n~e~~r~~~~--~~~~---gh~-------------------~sv-------- 67 (313)
T KOG1407|consen 22 KVHSVAWNC--DGTKLASGSFDKTVSVWNLERDRFRKE--LVYR---GHT-------------------DSV-------- 67 (313)
T ss_pred cceEEEEcc--cCceeeecccCCceEEEEecchhhhhh--hccc---CCC-------------------cch--------
Confidence 456777766 578999999999999999986532110 0000 000 000
Q ss_pred cccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeec
Q 016769 144 VDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYL 223 (383)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 223 (383)
.. ..+.+..+..++ +.+.+.+||+||.++.++...+... .+... ..+.
T Consensus 68 ----------------dq-l~w~~~~~d~~a-tas~dk~ir~wd~r~~k~~~~i~~~----------~eni~----i~ws 115 (313)
T KOG1407|consen 68 ----------------DQ-LCWDPKHPDLFA-TASGDKTIRIWDIRSGKCTARIETK----------GENIN----ITWS 115 (313)
T ss_pred ----------------hh-heeCCCCCcceE-EecCCceEEEEEeccCcEEEEeecc----------CcceE----EEEc
Confidence 00 012222222333 3445689999999999987766421 11111 1244
Q ss_pred CCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeee
Q 016769 224 PSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI 303 (383)
Q Consensus 224 ~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~ 303 (383)
|.. ..++.+..|..|.+.|.++.. +....+... -+.-++|..+.+.++....-|.|.|-..-. ... ...+
T Consensus 116 p~g----~~~~~~~kdD~it~id~r~~~-~~~~~~~~~-e~ne~~w~~~nd~Fflt~GlG~v~ILsyps--Lkp--v~si 185 (313)
T KOG1407|consen 116 PDG----EYIAVGNKDDRITFIDARTYK-IVNEEQFKF-EVNEISWNNSNDLFFLTNGLGCVEILSYPS--LKP--VQSI 185 (313)
T ss_pred CCC----CEEEEecCcccEEEEEecccc-eeehhcccc-eeeeeeecCCCCEEEEecCCceEEEEeccc--ccc--cccc
Confidence 543 257889999999999998743 233333222 244566665556555555567777754421 111 1234
Q ss_pred ecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 304 NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 304 ~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
+.|...+.++.|+|+|+|||+|+.|-.+.+||++..-++..+..+.=+|..+.||-||++||+||+|..|-|=
T Consensus 186 ~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA 258 (313)
T KOG1407|consen 186 KAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIA 258 (313)
T ss_pred ccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeE
Confidence 5677788999999999999999999999999999888888898899999999999999999999999988543
No 123
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.82 E-value=1.2e-18 Score=147.12 Aligned_cols=259 Identities=17% Similarity=0.289 Sum_probs=157.9
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEee------Ccccc---------ccc-------------ccccc--
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD------TVQHR---------TVS-------------SSWVH-- 59 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~------~~~~~---------~~~-------------~~~~~-- 59 (383)
.+.++.||.+.|++|+|++.+.+++|+|.|++-.+|. ++... .+. ....|
T Consensus 182 CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~ti 261 (481)
T KOG0300|consen 182 CLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTI 261 (481)
T ss_pred ceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCcee
Confidence 4567889999999999999999999999999999997 21100 000 00000
Q ss_pred ------cccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCC
Q 016769 60 ------SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPK 133 (383)
Q Consensus 60 ------~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (383)
..+|..+.++...-.++.+++++++|.|..+||+++++... .+.. ..
T Consensus 262 RvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~----~LtG-------------Hd---------- 314 (481)
T KOG0300|consen 262 RVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVN----ILTG-------------HD---------- 314 (481)
T ss_pred eeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceec----cccC-------------cc----------
Confidence 00111222222222356889999999999999999986321 1000 00
Q ss_pred ccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCC-eeeEeccCcCCCCCCcCCCC
Q 016769 134 DCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKG 212 (383)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~-~~~~~~~~~~~~s~~~~~~~ 212 (383)
....-|+.+..+-+++..+.|-+.|+||.+..- .+..++.+ ..
T Consensus 315 --------------------------~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGH----------td 358 (481)
T KOG0300|consen 315 --------------------------SELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGH----------TD 358 (481)
T ss_pred --------------------------hhccccccCCcceEEEEeccCceeEeccchhhcceeeeeccc----------cc
Confidence 000012222223466777888999999987322 12233221 11
Q ss_pred CceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccC
Q 016769 213 RGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292 (383)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~ 292 (383)
. ...+ .|... ..+++|+.|.+|++||+++-..++.++.- ..+++.+.++.....++.--....|++||++.
T Consensus 359 t-VTS~--vF~~d-----d~vVSgSDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG 429 (481)
T KOG0300|consen 359 T-VTSV--VFNTD-----DRVVSGSDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNG 429 (481)
T ss_pred c-eeEE--EEecC-----CceeecCCCceEEEeeeccccCcceeeec-CCccceeEeecCCceEEeccCCceEEEEecCC
Confidence 1 1111 13221 25899999999999999987777776653 35777787776655555555566799999975
Q ss_pred CCCeeEEeeeeecCCCCeEEEEECCCCc--EEEEEeCCCcEEEEEcCCCc
Q 016769 293 STGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIYNYRKGS 340 (383)
Q Consensus 293 ~~~~~~~~~~~~~~~~~i~~~~~~p~~~--~l~s~~~dg~i~iwd~~~~~ 340 (383)
..-..+-...-..|.--++++++..+.. -+.+++.|+.+.-|.+....
T Consensus 430 ~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 430 NRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred CccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEecccC
Confidence 3221111111223445688888864432 46788999999999986543
No 124
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=2.6e-18 Score=144.62 Aligned_cols=184 Identities=21% Similarity=0.350 Sum_probs=128.2
Q ss_pred eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc
Q 016769 174 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 253 (383)
Q Consensus 174 ~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~ 253 (383)
+++|+-|+.||.+|+.++.... +.. +.....|+. +.+. ...+++|++|++|++||.+... .
T Consensus 68 ~~~G~~dg~vr~~Dln~~~~~~-igt----------h~~~i~ci~---~~~~----~~~vIsgsWD~~ik~wD~R~~~-~ 128 (323)
T KOG1036|consen 68 IVTGGLDGQVRRYDLNTGNEDQ-IGT----------HDEGIRCIE---YSYE----VGCVISGSWDKTIKFWDPRNKV-V 128 (323)
T ss_pred EEEeccCceEEEEEecCCccee-ecc----------CCCceEEEE---eecc----CCeEEEcccCccEEEEeccccc-c
Confidence 4567788999999998877422 211 112233322 2222 1258999999999999998632 2
Q ss_pred eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEE
Q 016769 254 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 333 (383)
Q Consensus 254 ~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~i 333 (383)
...+. -...|.+++.. ++.++.|+.|..+.+|||....... ......-...+.++++-|++.-+++++-||+|.+
T Consensus 129 ~~~~d-~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~--q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVav 203 (323)
T KOG1036|consen 129 VGTFD-QGKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEPF--QRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAV 203 (323)
T ss_pred ccccc-cCceEEEEecc--CCEEEEeecCceEEEEEcccccchh--hhccccceeEEEEEEEecCCCceEEEeecceEEE
Confidence 22222 12367777664 4678999999999999997644322 1111112245889999998887888999999999
Q ss_pred EEcCCC----ceEEEeccccc---------ceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 334 YNYRKG----SALAILKYHHA---------TCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 334 wd~~~~----~~~~~~~~h~~---------~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
=.++.. +.-..++.|.. +|++++|||--+.||||+.||.|.+||+...
T Consensus 204 E~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~r 264 (323)
T KOG1036|consen 204 EYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNR 264 (323)
T ss_pred EccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcch
Confidence 777665 33346666753 7899999999889999999999999998643
No 125
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.81 E-value=2.3e-17 Score=155.22 Aligned_cols=356 Identities=15% Similarity=0.167 Sum_probs=210.2
Q ss_pred CCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
-+.++++.+|...|+++.-+|-=+.+|.|-.+|+|.++|+..++.+...... -+.+.+++|..+ +...++++...|.
T Consensus 192 ~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d--~g~VtslSFrtD-G~p~las~~~~G~ 268 (910)
T KOG1539|consen 192 GKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQD--WGRVTSLSFRTD-GNPLLASGRSNGD 268 (910)
T ss_pred CcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEcc--ccceeEEEeccC-CCeeEEeccCCce
Confidence 3567899999999999999999999999999999999999998888775432 246889999874 3345678888899
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccC---cccccCccccccccCCccceecc
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVG---ETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
+.+||++...... .+...+.++.... ..+...|....+.....-..|....+ ........++.+ ++.++ .
T Consensus 269 m~~wDLe~kkl~~-v~~nah~~sv~~~-~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~-Pp~~i----r 341 (910)
T KOG1539|consen 269 MAFWDLEKKKLIN-VTRNAHYGSVTGA-TFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSA-PPSCI----R 341 (910)
T ss_pred EEEEEcCCCeeee-eeeccccCCcccc-eecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCC-Cchhe----e
Confidence 9999998753211 0111111110000 00011111111111111111211111 011111111111 11110 0
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCC---CCCCcC-CC----CCceeeEEEeecCCC-CCCceEEEE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCG---GSPNFS-SK----GRGMCMAVQAYLPSK-SQGFVNVLA 235 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~---~s~~~~-~~----~~~~~~~~~~~~~~~-~~~~~~~~s 235 (383)
+......+ +.+...|++.|.+++...++-..+.+.... -..... +. ..+..++ +...+ ... .++++
T Consensus 342 fy~~~g~~-ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa---~~~~RE~~W-~Nv~~ 416 (910)
T KOG1539|consen 342 FYGSQGHF-ILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFA---FENAREKEW-DNVIT 416 (910)
T ss_pred eeccCcEE-EEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeee---cccchhhhh-cceeE
Confidence 11111223 344567888888887654433222220000 000000 00 0011111 10000 001 13455
Q ss_pred E-eCCCcEEEEeCCCCCCceeeee-----ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 236 G-YEDGSILVWDIRNPGIPLTAMK-----VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 236 g-~~dg~i~~wdl~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
+ -.+..++.|++++...-...++ .-...+.+++++..|+..+.|...|.|-+|+++.+-.+..+- .-..+...
T Consensus 417 ~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~-~~~ah~~~ 495 (910)
T KOG1539|consen 417 AHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFG-DSPAHKGE 495 (910)
T ss_pred EecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccc-cCccccCc
Confidence 4 5566799999987433222222 122567888889999988999999999999997542111110 11346678
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCc-----------------------------------------eEEEeccc
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGS-----------------------------------------ALAILKYH 348 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~-----------------------------------------~~~~~~~h 348 (383)
|.++++..-++.+++++.+|-++.||..... .+..+.+|
T Consensus 496 V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh 575 (910)
T KOG1539|consen 496 VTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGH 575 (910)
T ss_pred eeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhcc
Confidence 9999999888999999999999999986532 12245689
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 349 HATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 349 ~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+.|++.+|||||++|++++.|++|++||+.
T Consensus 576 ~nritd~~FS~DgrWlisasmD~tIr~wDlp 606 (910)
T KOG1539|consen 576 GNRITDMTFSPDGRWLISASMDSTIRTWDLP 606 (910)
T ss_pred ccceeeeEeCCCCcEEEEeecCCcEEEEecc
Confidence 9999999999999999999999999999984
No 126
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.81 E-value=8.2e-19 Score=151.17 Aligned_cols=200 Identities=20% Similarity=0.325 Sum_probs=142.5
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEeccC---cCCCCCCcC---CCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQN---SCGGSPNFS---SKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~---~~~~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
..++++-+..|.|+|||+........-.+- .....+.|. +++.++.+ .++|.. ...+++|---+.|++
T Consensus 165 ~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~L---dWSp~~---~g~LlsGDc~~~I~l 238 (440)
T KOG0302|consen 165 EVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGL---DWSPIK---TGRLLSGDCVKGIHL 238 (440)
T ss_pred cceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceee---eccccc---ccccccCccccceEe
Confidence 346777777899999998654321111100 000111111 11222222 233321 124777777788999
Q ss_pred EeCCCCCC--ceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCC-eeEEeeeeecCCCCeEEEEECCCCc
Q 016769 245 WDIRNPGI--PLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTG-SCVIKKEINLERPGISGTSIRPDSK 320 (383)
Q Consensus 245 wdl~~~~~--~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~-~~~~~~~~~~~~~~i~~~~~~p~~~ 320 (383)
|...++.- ....+.+|+..|..+.++|.-. .+++|+.|++|+|||++.... .++.. +.+.+.|+-++|+..-.
T Consensus 239 w~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~---kAh~sDVNVISWnr~~~ 315 (440)
T KOG0302|consen 239 WEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST---KAHNSDVNVISWNRREP 315 (440)
T ss_pred eeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe---eccCCceeeEEccCCcc
Confidence 98876431 1234567999999999988766 468999999999999986532 33332 56777899999998888
Q ss_pred EEEEEeCCCcEEEEEcCC---CceEEEecccccceeEEEEeCCC-CEEEEEeCCCcEEEEeCC
Q 016769 321 IAATAGWDRRVRIYNYRK---GSALAILKYHHATCNAVSFSSDC-KLMASASEDSTVALWELY 379 (383)
Q Consensus 321 ~l~s~~~dg~i~iwd~~~---~~~~~~~~~h~~~v~~v~~spd~-~~las~s~d~~i~~w~~~ 379 (383)
+||+|+.||+++|||++. ++++..++.|..+|.+|.|+|.. ..|+++|.|..|.|||+.
T Consensus 316 lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 316 LLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred eeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence 999999999999999965 67788999999999999999965 488999999999999996
No 127
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.81 E-value=6.3e-17 Score=144.46 Aligned_cols=277 Identities=20% Similarity=0.302 Sum_probs=179.2
Q ss_pred eeeecC-CceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEe
Q 016769 13 VLRGHR-ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (383)
Q Consensus 13 ~l~gH~-~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~W 91 (383)
.|+++. .-|+||+|.++|+ ++||-.+|.|.||+..+.+.......| ..++.+++.-- +..|+||+.|..|..|
T Consensus 240 ~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH--~ggv~~L~~lr---~GtllSGgKDRki~~W 313 (626)
T KOG2106|consen 240 IFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAH--DGGVFSLCMLR---DGTLLSGGKDRKIILW 313 (626)
T ss_pred ccccccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeec--CCceEEEEEec---CccEeecCccceEEec
Confidence 344443 6899999999996 788999999999998655444433333 35677776554 3678889999999999
Q ss_pred ecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCc
Q 016769 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPK 171 (383)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (383)
| .+-...+ + +..|... | .+..+......
T Consensus 314 d-~~y~k~r-~----------------~elPe~~---------------G-------------------~iRtv~e~~~d 341 (626)
T KOG2106|consen 314 D-DNYRKLR-E----------------TELPEQF---------------G-------------------PIRTVAEGKGD 341 (626)
T ss_pred c-ccccccc-c----------------ccCchhc---------------C-------------------CeeEEecCCCc
Confidence 9 2111000 0 0001000 0 00000011111
Q ss_pred eeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
+++ |...+.|.-=.++++..+....+. ..--+ . +..|+. ..++++++|+.+++|+ . .
T Consensus 342 -i~v-GTtrN~iL~Gt~~~~f~~~v~gh~---------delwg--l---a~hps~----~q~~T~gqdk~v~lW~-~--~ 398 (626)
T KOG2106|consen 342 -ILV-GTTRNFILQGTLENGFTLTVQGHG---------DELWG--L---ATHPSK----NQLLTCGQDKHVRLWN-D--H 398 (626)
T ss_pred -EEE-eeccceEEEeeecCCceEEEEecc---------cceee--E---EcCCCh----hheeeccCcceEEEcc-C--C
Confidence 222 223344444445555543333210 00011 1 122332 2488999999999998 2 2
Q ss_pred CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcE
Q 016769 252 IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRV 331 (383)
Q Consensus 252 ~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i 331 (383)
.+ ..-+.-.+++.|+.|+|++ .++.|...|+-.+.|.+... ++. .+.....++.++|+|+|.+||.|+.|+.|
T Consensus 399 k~-~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~---lv~--~~~d~~~ls~v~ysp~G~~lAvgs~d~~i 471 (626)
T KOG2106|consen 399 KL-EWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQD---LVT--IHTDNEQLSVVRYSPDGAFLAVGSHDNHI 471 (626)
T ss_pred ce-eEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccce---eEE--EEecCCceEEEEEcCCCCEEEEecCCCeE
Confidence 22 2222345789999999999 88999999999999887532 222 22335689999999999999999999999
Q ss_pred EEEEcCC-CceEEEecc-cccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 332 RIYNYRK-GSALAILKY-HHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 332 ~iwd~~~-~~~~~~~~~-h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
+||.+.. ++.+..... |..+|..+.||+|+++|.+-|.|-.|-.|.
T Consensus 472 yiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 472 YIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWK 519 (626)
T ss_pred EEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEc
Confidence 9999965 455544433 347899999999999999999999999994
No 128
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.81 E-value=2.6e-18 Score=150.52 Aligned_cols=188 Identities=20% Similarity=0.284 Sum_probs=148.6
Q ss_pred eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc
Q 016769 174 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 253 (383)
Q Consensus 174 ~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~ 253 (383)
+..|+.|..+-++|..+++.+..++.+. .-+..+ .+.+.. ..+++++.|..|++|..-....
T Consensus 234 ilTGG~d~~av~~d~~s~q~l~~~~Gh~------------kki~~v-~~~~~~----~~v~~aSad~~i~vws~~~~s~- 295 (506)
T KOG0289|consen 234 ILTGGEDKTAVLFDKPSNQILATLKGHT------------KKITSV-KFHKDL----DTVITASADEIIRVWSVPLSSE- 295 (506)
T ss_pred ceecCCCCceEEEecchhhhhhhccCcc------------eEEEEE-Eeccch----hheeecCCcceEEeeccccccC-
Confidence 3456667889999998888776665421 112222 244432 2478899999999998765443
Q ss_pred eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEE
Q 016769 254 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 333 (383)
Q Consensus 254 ~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~i 333 (383)
......|.++|..+..++++.++++++.|+...+.|+.... .+.+...+...-.+++.+|||||-.|++|..|+.++|
T Consensus 296 ~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~--~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vki 373 (506)
T KOG0289|consen 296 PTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGS--QLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKI 373 (506)
T ss_pred ccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCc--EEEEEeeccccceeEEeeEcCCceEEeccCCCceEEE
Confidence 34456799999999999999999999999999999997543 3322222222345889999999999999999999999
Q ss_pred EEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 334 YNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 334 wd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
||+..+..+..+.+|.++|.+++|+-+|-+||++.+|+.|++||+...
T Consensus 374 wdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl 421 (506)
T KOG0289|consen 374 WDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKL 421 (506)
T ss_pred EEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhh
Confidence 999999989999999999999999999999999999999999999753
No 129
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.81 E-value=5.8e-17 Score=146.01 Aligned_cols=268 Identities=12% Similarity=0.121 Sum_probs=164.0
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeE-EEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCccee-EecccCC
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDG 86 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L-~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~D~ 86 (383)
+++.++.+|.. +.+++|+|+++.| ++++.|+.|++||..+++....+..+ .....+.+.++ ++.+ ++++.|+
T Consensus 22 ~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~~--g~~l~~~~~~~~ 95 (300)
T TIGR03866 22 EVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSG---PDPELFALHPN--GKILYIANEDDN 95 (300)
T ss_pred ceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCC---CCccEEEECCC--CCEEEEEcCCCC
Confidence 45667776644 6789999999876 67788999999999876654433222 12345567663 4555 5667899
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
++++||+.+..... .+ .... . .....+.
T Consensus 96 ~l~~~d~~~~~~~~----~~-------------~~~~-------~----------------------------~~~~~~~ 123 (300)
T TIGR03866 96 LVTVIDIETRKVLA----EI-------------PVGV-------E----------------------------PEGMAVS 123 (300)
T ss_pred eEEEEECCCCeEEe----Ee-------------eCCC-------C----------------------------cceEEEC
Confidence 99999997642100 00 0000 0 0001123
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
+++. +++++......+.+||+++.+....+..... ...+ .+.++ +...++++..++.|++||
T Consensus 124 ~dg~-~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-----------~~~~---~~s~d---g~~l~~~~~~~~~v~i~d 185 (300)
T TIGR03866 124 PDGK-IVVNTSETTNMAHFIDTKTYEIVDNVLVDQR-----------PRFA---EFTAD---GKELWVSSEIGGTVSVID 185 (300)
T ss_pred CCCC-EEEEEecCCCeEEEEeCCCCeEEEEEEcCCC-----------ccEE---EECCC---CCEEEEEcCCCCEEEEEE
Confidence 4443 4444444345678889988765543322110 0011 23332 222234556799999999
Q ss_pred CCCCCCceeeeeccc-----c--CeEEEEEeCCCCceEE-EEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCC
Q 016769 247 IRNPGIPLTAMKVHL-----E--PVLCLSIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD 318 (383)
Q Consensus 247 l~~~~~~~~~~~~h~-----~--~v~~~~~~~~~~~~~s-~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 318 (383)
+++.. .+..+..+. . ....+.+++++..++. .+.++++.+||++... .. ... .....+.+++|+|+
T Consensus 186 ~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~--~~--~~~-~~~~~~~~~~~~~~ 259 (300)
T TIGR03866 186 VATRK-VIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYE--VL--DYL-LVGQRVWQLAFTPD 259 (300)
T ss_pred cCcce-eeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCc--EE--EEE-EeCCCcceEEECCC
Confidence 98743 233332221 1 1235778888887544 4557789999986432 21 111 12346889999999
Q ss_pred CcEEEEE-eCCCcEEEEEcCCCceEEEecccccceeEEEEeC
Q 016769 319 SKIAATA-GWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS 359 (383)
Q Consensus 319 ~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~sp 359 (383)
+++|+++ +.+++|++||+.+++.+..++.. +..+.++|+|
T Consensus 260 g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~ 300 (300)
T TIGR03866 260 EKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVRP 300 (300)
T ss_pred CCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence 9998876 46999999999999998888754 5568999876
No 130
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=6.9e-17 Score=136.41 Aligned_cols=299 Identities=17% Similarity=0.226 Sum_probs=184.4
Q ss_pred CCCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccC
Q 016769 6 PPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 6 ~~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
+|.+...+|.--. -.|+.|++-|.+||.|..||.|.+||+.+.+.-..+..|. +.+.+++++. +|+.|+|+|.|
T Consensus 13 ~PEel~~tld~~~--a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~--~pi~sl~WS~--dgr~LltsS~D 86 (405)
T KOG1273|consen 13 YPEELTHTLDNPL--AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHV--RPITSLCWSR--DGRKLLTSSRD 86 (405)
T ss_pred ChHhhceeccCCc--cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccc--cceeEEEecC--CCCEeeeecCC
Confidence 5666666765222 6889999999999999999999999998876444443343 5688999988 57999999999
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCc-eeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNS-YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
..+++||+..|.+ ...++..+ .-++.+...+ ...+......+ ...+..
T Consensus 87 ~si~lwDl~~gs~----l~rirf~spv~~~q~hp~k-----------~n~~va~~~~~----------------sp~vi~ 135 (405)
T KOG1273|consen 87 WSIKLWDLLKGSP----LKRIRFDSPVWGAQWHPRK-----------RNKCVATIMEE----------------SPVVID 135 (405)
T ss_pred ceeEEEeccCCCc----eeEEEccCccceeeecccc-----------CCeEEEEEecC----------------CcEEEE
Confidence 9999999988743 22222111 0011111100 00000000000 000000
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
++..-..+|. -+.++.+ ..+. ..+ .|- + . ...+++|..-|.+.+
T Consensus 136 ~s~~~h~~Lp--~d~d~dl-----------------------n~sa-s~~------~fd--r-~-g~yIitGtsKGkllv 179 (405)
T KOG1273|consen 136 FSDPKHSVLP--KDDDGDL-----------------------NSSA-SHG------VFD--R-R-GKYIITGTSKGKLLV 179 (405)
T ss_pred ecCCceeecc--CCCcccc-----------------------cccc-ccc------ccc--C-C-CCEEEEecCcceEEE
Confidence 1000000000 0001000 0000 000 011 1 1 136889999999999
Q ss_pred EeCCCCCCceeeeeccc-cCeEEEEEeCCCCceEEEEcCCcEEEEEccCCC---CeeEEeeeeec----CCCCeEEEEEC
Q 016769 245 WDIRNPGIPLTAMKVHL-EPVLCLSIDESCNGGISGGADQKIVLYNLDHST---GSCVIKKEINL----ERPGISGTSIR 316 (383)
Q Consensus 245 wdl~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~---~~~~~~~~~~~----~~~~i~~~~~~ 316 (383)
+|..+- .++..++... ..|..+.+...+..++.-+.|..|+.|++..-. .........+. ..-.-.++.|+
T Consensus 180 ~~a~t~-e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs 258 (405)
T KOG1273|consen 180 YDAETL-ECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFS 258 (405)
T ss_pred Eecchh-eeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeec
Confidence 998774 3455555444 678888999999999999999999999976211 00000000000 00123567899
Q ss_pred CCCcEEEEEe-CCCcEEEEEcCCCceEEEecccc-cceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 317 PDSKIAATAG-WDRRVRIYNYRKGSALAILKYHH-ATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 317 p~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~h~-~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+|.|+.+++ ....++||....|..++.+-|-+ +....|.|+|-...+++- ..|.|++|...
T Consensus 259 ~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~ 322 (405)
T KOG1273|consen 259 GDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVV 322 (405)
T ss_pred CCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEee
Confidence 9999987766 45689999999999999998777 678889999987777777 77899999764
No 131
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.80 E-value=8.1e-18 Score=155.27 Aligned_cols=297 Identities=21% Similarity=0.280 Sum_probs=188.2
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccc----ccccc-cccccceeeeeeecCCCCcceeEecccCCe
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT----VSSSW-VHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
++.||.+-|+++.++|.+..|+|+|+|.++.+|...+..- ...+. ..+.+.+....-+.+ +++.+++-|.-|-
T Consensus 262 ll~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~--n~~~ii~~g~~Gg 339 (764)
T KOG1063|consen 262 LLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSP--NSNVIIAHGRTGG 339 (764)
T ss_pred hhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcC--CCCEEEEecccCc
Confidence 4569999999999999999999999999999999754311 11110 011234456666666 3577888899999
Q ss_pred EEEeecCCCCCCCCCeeeeec-CceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 88 VKCWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
+++|--++.. ..+... .+.|+. .+.+ .+..
T Consensus 340 ~hlWkt~d~~-----~w~~~~~iSGH~~-------------------~V~d-------------------------v~W~ 370 (764)
T KOG1063|consen 340 FHLWKTKDKT-----FWTQEPVISGHVD-------------------GVKD-------------------------VDWD 370 (764)
T ss_pred EEEEeccCcc-----ceeeccccccccc-------------------ccee-------------------------eeec
Confidence 9999822211 011000 011100 0000 0112
Q ss_pred CCCCceeeeccCCcceEEEEecCCCC-eeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 245 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w 245 (383)
+.| .|++.+ +.|.+-|++---..+ .-..+.. ++..|+-+....+.+. ...+++|.+.+-+|+|
T Consensus 371 psG-eflLsv-s~DQTTRlFa~wg~q~~wHEiaR----------PQiHGyDl~c~~~vn~----~~~FVSgAdEKVlRvF 434 (764)
T KOG1063|consen 371 PSG-EFLLSV-SLDQTTRLFARWGRQQEWHEIAR----------PQIHGYDLTCLSFVNE----DLQFVSGADEKVLRVF 434 (764)
T ss_pred CCC-CEEEEe-ccccceeeecccccccceeeecc----------cccccccceeeehccC----Cceeeecccceeeeee
Confidence 333 355544 456777776433111 0011110 1112222222223322 1246777777777888
Q ss_pred eCCC-------------------------------------------CCC-------------------c----------
Q 016769 246 DIRN-------------------------------------------PGI-------------------P---------- 253 (383)
Q Consensus 246 dl~~-------------------------------------------~~~-------------------~---------- 253 (383)
+.-. ++. |
T Consensus 435 ~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tL 514 (764)
T KOG1063|consen 435 EAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTL 514 (764)
T ss_pred cCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhcc
Confidence 6400 000 0
Q ss_pred ---eeeeeccccCeEEEEEeCCCCceEEEEcCC-----cEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE
Q 016769 254 ---LTAMKVHLEPVLCLSIDESCNGGISGGADQ-----KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 254 ---~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~-----~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
.+.+-+|...|.+++.+++++.+++++... .|++|+... ......+..|+-.|+.++|+||++||++.
T Consensus 515 wPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~----W~~~~~L~~HsLTVT~l~FSpdg~~LLsv 590 (764)
T KOG1063|consen 515 WPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTAN----WLQVQELEGHSLTVTRLAFSPDGRYLLSV 590 (764)
T ss_pred chhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccc----hhhhheecccceEEEEEEECCCCcEEEEe
Confidence 012346888899999999999989887643 478897542 23334566777789999999999999999
Q ss_pred eCCCcEEEEEcCCCc----eEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 326 GWDRRVRIYNYRKGS----ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
|.|+++.+|...... .+...+.|.+=|++..|+||++++||+|+|.+|++|...+
T Consensus 591 sRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~ 649 (764)
T KOG1063|consen 591 SRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPD 649 (764)
T ss_pred ecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccC
Confidence 999999999884432 2345778999999999999999999999999999998854
No 132
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=4.1e-20 Score=170.99 Aligned_cols=183 Identities=21% Similarity=0.344 Sum_probs=147.2
Q ss_pred eccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCce
Q 016769 175 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 254 (383)
Q Consensus 175 ~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~ 254 (383)
+.|+.+-.+.||.+.....+..+..+. ..+-++ .|.+. ...+.+|+.+|+|++|||+... .+
T Consensus 44 ~~Gg~~~k~~L~~i~kp~~i~S~~~he----------spIeSl---~f~~~----E~LlaagsasgtiK~wDleeAk-~v 105 (825)
T KOG0267|consen 44 VTGGEDEKVNLWAIGKPNAITSLTGHE----------SPIESL---TFDTS----ERLLAAGSASGTIKVWDLEEAK-IV 105 (825)
T ss_pred ccCCCceeeccccccCCchhheeeccC----------Ccceee---ecCcc----hhhhcccccCCceeeeehhhhh-hh
Confidence 345556778889887766555443211 111111 12222 2346779999999999999744 46
Q ss_pred eeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEE
Q 016769 255 TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIY 334 (383)
Q Consensus 255 ~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iw 334 (383)
+++.+|..++..+.|+|.+.+.++|+.|..+++||+....+.... +.+...+..++|+|+|+++++++.|.+++||
T Consensus 106 rtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~----~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~ 181 (825)
T KOG0267|consen 106 RTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTY----KSHTRVVDVLRLSPDGRWVASGGEDNTVKIW 181 (825)
T ss_pred hhhhccccCcceeeeccceEEeccccccccceehhhhccCceeee----cCCcceeEEEeecCCCceeeccCCcceeeee
Confidence 789999999999999999998899999999999999866554432 3355678999999999999999999999999
Q ss_pred EcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 335 NYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 335 d~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
|+..|+.+..|..|+..+.++.|+|..-.+++||.|++|++||+.
T Consensus 182 d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dle 226 (825)
T KOG0267|consen 182 DLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLE 226 (825)
T ss_pred cccccccccccccccccccccccCchhhhhccCCCCceeeeeccc
Confidence 999999999999999999999999998899999999999999985
No 133
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=1.8e-19 Score=166.81 Aligned_cols=238 Identities=21% Similarity=0.345 Sum_probs=181.9
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEee
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd 92 (383)
.+-.|...|.++..-..++.+++|+.|..+.+|.......+..+..|. ..|-++.|.+. ...+++|+.||+||+||
T Consensus 23 ~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~he--spIeSl~f~~~--E~LlaagsasgtiK~wD 98 (825)
T KOG0267|consen 23 EFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHE--SPIESLTFDTS--ERLLAAGSASGTIKVWD 98 (825)
T ss_pred hhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccC--CcceeeecCcc--hhhhcccccCCceeeee
Confidence 345789999999887778899999999999999987766666666654 46888888873 35667888999999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
++++...++ +
T Consensus 99 leeAk~vrt----L------------------------------------------------------------------ 108 (825)
T KOG0267|consen 99 LEEAKIVRT----L------------------------------------------------------------------ 108 (825)
T ss_pred hhhhhhhhh----h------------------------------------------------------------------
Confidence 986532110 0
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
.|...+.+++ . |.|- + .+.++|+.|..+++||++..+
T Consensus 109 ---tgh~~~~~sv---------------------~--------------f~P~---~-~~~a~gStdtd~~iwD~Rk~G- 145 (825)
T KOG0267|consen 109 ---TGHLLNITSV---------------------D--------------FHPY---G-EFFASGSTDTDLKIWDIRKKG- 145 (825)
T ss_pred ---hccccCccee---------------------e--------------eccc---e-EEeccccccccceehhhhccC-
Confidence 0000000110 0 1110 0 124678889999999999744
Q ss_pred ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEE
Q 016769 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVR 332 (383)
Q Consensus 253 ~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~ 332 (383)
+....++|...|.++.|.|++.++++++.|+.+++||+..+ .+.++.+.+...+..+.|+|..-.+++|+.|++++
T Consensus 146 c~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~ag----k~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~ 221 (825)
T KOG0267|consen 146 CSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAG----KLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVR 221 (825)
T ss_pred ceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccc----ccccccccccccccccccCchhhhhccCCCCceee
Confidence 46778889999999999999999999999999999998533 23345566777899999999999999999999999
Q ss_pred EEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCC
Q 016769 333 IYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 333 iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~ 371 (383)
+||+++-+.+...+.....|.+++|+|+++.+.+|-.+.
T Consensus 222 f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~s 260 (825)
T KOG0267|consen 222 FWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGEQIS 260 (825)
T ss_pred eeccceeEEeeccCCccCCceeeeecCCceeeecCchhh
Confidence 999999888887777788899999999999998886554
No 134
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.79 E-value=5.7e-18 Score=148.88 Aligned_cols=201 Identities=21% Similarity=0.251 Sum_probs=140.8
Q ss_pred eeeccCCcceEEEEecCCCCee---eEeccC---cCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 173 MAVAGEQLSEVEIWDLNTAERC---TRLHQN---SCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~---~~~~~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
+++.|..+..|.||||.-...+ .++..- ....--..+....++.-++..+.. +......|++|+.|++|++||
T Consensus 194 yvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~-n~~~~nVLaSgsaD~TV~lWD 272 (463)
T KOG0270|consen 194 YVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSW-NRNFRNVLASGSADKTVKLWD 272 (463)
T ss_pred eEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHh-ccccceeEEecCCCceEEEEE
Confidence 4556778889999999653322 222210 000000001111122222221221 122234578899999999999
Q ss_pred CCCCCCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC-cEEEE
Q 016769 247 IRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KIAAT 324 (383)
Q Consensus 247 l~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-~~l~s 324 (383)
+.+ +.|-..++.|...|.++.|++... .+++|+.|+++++.|++..+..... .+ ..+.|-.+++.|.. ..+++
T Consensus 273 ~~~-g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~---wk-~~g~VEkv~w~~~se~~f~~ 347 (463)
T KOG0270|consen 273 VDT-GKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKE---WK-FDGEVEKVAWDPHSENSFFV 347 (463)
T ss_pred cCC-CCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCce---EE-eccceEEEEecCCCceeEEE
Confidence 998 456778888999999999977654 6789999999999999854332221 22 12567788887754 46888
Q ss_pred EeCCCcEEEEEcCCC-ceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 325 AGWDRRVRIYNYRKG-SALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 325 ~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
+..||+++-+|++.. +++.++++|...|.++.+++.-+ +|+|+|.|++|++|++.
T Consensus 348 ~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~ 404 (463)
T KOG0270|consen 348 STDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFD 404 (463)
T ss_pred ecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeec
Confidence 899999999999875 89999999999999999988665 89999999999999985
No 135
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.78 E-value=9.9e-18 Score=147.37 Aligned_cols=211 Identities=22% Similarity=0.374 Sum_probs=153.8
Q ss_pred ecCCceeeEEEeCCC-CeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecC
Q 016769 16 GHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (383)
Q Consensus 16 gH~~~V~~v~f~~~~-~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~ 94 (383)
||++.|.+|+++... ..|||||+|.+|++||+.++++...+..|+ ..+.++.+.+. ....|++|+.|+++++.|+.
T Consensus 241 gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~--k~Vq~l~wh~~-~p~~LLsGs~D~~V~l~D~R 317 (463)
T KOG0270|consen 241 GHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHG--KKVQTLEWHPY-EPSVLLSGSYDGTVALKDCR 317 (463)
T ss_pred cchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcC--CceeEEEecCC-CceEEEeccccceEEeeecc
Confidence 899999999998764 589999999999999999999887776554 45788888875 45789999999999999985
Q ss_pred CCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceee
Q 016769 95 NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMA 174 (383)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (383)
...... ..+ -
T Consensus 318 ~~~~s~---------------------------------------------------------------------~~w-k 327 (463)
T KOG0270|consen 318 DPSNSG---------------------------------------------------------------------KEW-K 327 (463)
T ss_pred CccccC---------------------------------------------------------------------ceE-E
Confidence 421000 000 0
Q ss_pred eccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCce
Q 016769 175 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 254 (383)
Q Consensus 175 ~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~ 254 (383)
+.|. =..-.|+-.. ...++++..||+|+-+|+|+++.++
T Consensus 328 ~~g~--VEkv~w~~~s---------------------------------------e~~f~~~tddG~v~~~D~R~~~~~v 366 (463)
T KOG0270|consen 328 FDGE--VEKVAWDPHS---------------------------------------ENSFFVSTDDGTVYYFDIRNPGKPV 366 (463)
T ss_pred eccc--eEEEEecCCC---------------------------------------ceeEEEecCCceEEeeecCCCCCce
Confidence 0010 0122343111 1135678899999999999998899
Q ss_pred eeeeccccCeEEEEEeCCCCc-eEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCc-EEEEEeCCCcEE
Q 016769 255 TAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK-IAATAGWDRRVR 332 (383)
Q Consensus 255 ~~~~~h~~~v~~~~~~~~~~~-~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~s~~~dg~i~ 332 (383)
-.++.|.++|.++++...... +++++.|+.+++|++...+........+ ..+...|+++.|+-. .+|.|+..+.++
T Consensus 367 wt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~--~~~rl~c~~~~~~~a~~la~GG~k~~~~ 444 (463)
T KOG0270|consen 367 WTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSF--KLGRLHCFALDPDVAFTLAFGGEKAVLR 444 (463)
T ss_pred eEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccc--cccceeecccCCCcceEEEecCccceEE
Confidence 999999999999999877665 5788999999999997655433222222 223467777888754 567777788899
Q ss_pred EEEcCCCceE
Q 016769 333 IYNYRKGSAL 342 (383)
Q Consensus 333 iwd~~~~~~~ 342 (383)
+||+.+...+
T Consensus 445 vwd~~~~~~V 454 (463)
T KOG0270|consen 445 VWDIFTNSPV 454 (463)
T ss_pred EeecccChhH
Confidence 9999776543
No 136
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.78 E-value=2.7e-18 Score=144.54 Aligned_cols=205 Identities=15% Similarity=0.269 Sum_probs=147.0
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCe---eeEeccCcC-----CCCCCcCCCCCceeeEEEeecCCCCCCceEEEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAER---CTRLHQNSC-----GGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 235 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~---~~~~~~~~~-----~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 235 (383)
.++++|. +++.|+.|-.|+|.|++.... ...+..+.. +...-+++-..+.++ .|.|.. ..+++
T Consensus 119 afs~DG~--lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l---~FHPre----~ILiS 189 (430)
T KOG0640|consen 119 AFSPDGS--LVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDL---DFHPRE----TILIS 189 (430)
T ss_pred eeCCCCc--EEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccce---eecchh----heEEe
Confidence 3556664 678889999999999874321 111111000 000011111122222 355532 24789
Q ss_pred EeCCCcEEEEeCCCCCC--ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee-eeecCCCCeEE
Q 016769 236 GYEDGSILVWDIRNPGI--PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK-EINLERPGISG 312 (383)
Q Consensus 236 g~~dg~i~~wdl~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~-~~~~~~~~i~~ 312 (383)
|+.|++|++||+.++.. ..+.++ ..++|++++|+|.|..++.|..-..+++||++..++ .... .-..+...|++
T Consensus 190 ~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qc--fvsanPd~qht~ai~~ 266 (430)
T KOG0640|consen 190 GSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQC--FVSANPDDQHTGAITQ 266 (430)
T ss_pred ccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEecCCCceeEEeccceeE--eeecCcccccccceeE
Confidence 99999999999976432 122222 357999999999999999988888999999986543 2222 22456678999
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCCCceEEEec-cccc-ceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK-YHHA-TCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~h~~-~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+.+++.++..++|+.||.|+|||--+++++.++. +|.+ .|.+..|.-+|+++.+.+.|.+|++|.+..
T Consensus 267 V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t 336 (430)
T KOG0640|consen 267 VRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEIST 336 (430)
T ss_pred EEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecC
Confidence 9999999999999999999999999999998875 4654 688999999999999999999999999864
No 137
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.78 E-value=1.1e-17 Score=136.61 Aligned_cols=233 Identities=18% Similarity=0.224 Sum_probs=150.5
Q ss_pred CCCeeeeeecCCceeeEEEe-C-CCCeEEEecCCCeEEEeeCccccccccccccc-ccceeeeeeecCCCCcceeEeccc
Q 016769 8 PDPVAVLRGHRASVTDVCFH-Q-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHS-AAHGIVSVATGPSIGLNKVISQGR 84 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~-~-~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~~~ 84 (383)
..+..+|.||+++|+.++|. | -|.+|||+|.||.|.||.-.+++-. ....|. +..++-++++-|..-+-.|++++.
T Consensus 46 s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~-k~~e~~~h~~SVNsV~wapheygl~LacasS 124 (299)
T KOG1332|consen 46 SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWT-KAYEHAAHSASVNSVAWAPHEYGLLLACASS 124 (299)
T ss_pred ceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchh-hhhhhhhhcccceeecccccccceEEEEeeC
Confidence 36788999999999999984 4 6899999999999999998777422 222221 224577788887644567889999
Q ss_pred CCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
||+|++.++.+...-..+ .+ .... ++|- ..+ +
T Consensus 125 DG~vsvl~~~~~g~w~t~--ki---------------~~aH-------------~~Gv----------------nsV--s 156 (299)
T KOG1332|consen 125 DGKVSVLTYDSSGGWTTS--KI---------------VFAH-------------EIGV----------------NSV--S 156 (299)
T ss_pred CCcEEEEEEcCCCCccch--hh---------------hhcc-------------cccc----------------cee--e
Confidence 999999998654110000 00 0000 0000 000 0
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
..+. ...+.+ ..+ .+.. .-..+++|+-|..|+|
T Consensus 157 wapa---------~~~g~~-------------~~~---------~~~~----------------~~krlvSgGcDn~Vki 189 (299)
T KOG1332|consen 157 WAPA---------SAPGSL-------------VDQ---------GPAA----------------KVKRLVSGGCDNLVKI 189 (299)
T ss_pred ecCc---------CCCccc-------------ccc---------Cccc----------------ccceeeccCCccceee
Confidence 0000 000000 000 0000 0124789999999999
Q ss_pred EeCCCCCCce-eeeeccccCeEEEEEeCCCC----ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC
Q 016769 245 WDIRNPGIPL-TAMKVHLEPVLCLSIDESCN----GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319 (383)
Q Consensus 245 wdl~~~~~~~-~~~~~h~~~v~~~~~~~~~~----~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 319 (383)
|+..+..-.+ .++..|.+.|+.+++.|... .+++++.|+++.||..+........ +.++.....+..+++++.|
T Consensus 190 W~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~-tll~~f~~~~w~vSWS~sG 268 (299)
T KOG1332|consen 190 WKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKK-TLLEEFPDVVWRVSWSLSG 268 (299)
T ss_pred eecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccc-cccccCCcceEEEEEeccc
Confidence 9987643222 34789999999999988652 5689999999999987744332221 1122233468899999999
Q ss_pred cEEEEEeCCCcEEEEEcC
Q 016769 320 KIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 320 ~~l~s~~~dg~i~iwd~~ 337 (383)
+.|+.++.|.+|.+|--.
T Consensus 269 n~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 269 NILAVSGGDNKVTLWKEN 286 (299)
T ss_pred cEEEEecCCcEEEEEEeC
Confidence 999999999999999764
No 138
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.78 E-value=1.4e-16 Score=146.86 Aligned_cols=259 Identities=19% Similarity=0.282 Sum_probs=180.2
Q ss_pred CCCCCCCeeeeeecC--------CceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccc-cccccccceeeeeeecCCC
Q 016769 4 RPPPPDPVAVLRGHR--------ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS-SWVHSAAHGIVSVATGPSI 74 (383)
Q Consensus 4 ~~~~~~~~~~l~gH~--------~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 74 (383)
|++.++....+.-|+ .+|++|||+.+.+.||.+=+||.|-+|++...-.... +.++ ....+-++++.+
T Consensus 3 r~~~~~s~~~m~vhrcrf~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~-~drsIE~L~W~e-- 79 (691)
T KOG2048|consen 3 RKKEPQSRGKMQVHRCRFVDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGP-EDRSIESLAWAE-- 79 (691)
T ss_pred cccCCcccceeEEEEEEEEeeeccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecC-CCCceeeEEEcc--
Confidence 344445445555553 5899999999999999999999999999977544332 2222 234577788875
Q ss_pred CcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccc
Q 016769 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKE 154 (383)
Q Consensus 75 ~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (383)
+.+|+|.+.+|+|.-||+.+++... .+
T Consensus 80 -~~RLFS~g~sg~i~EwDl~~lk~~~----~~------------------------------------------------ 106 (691)
T KOG2048|consen 80 -GGRLFSSGLSGSITEWDLHTLKQKY----NI------------------------------------------------ 106 (691)
T ss_pred -CCeEEeecCCceEEEEecccCceeE----Ee------------------------------------------------
Confidence 5789999999999999997653110 00
Q ss_pred cCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEE
Q 016769 155 SNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL 234 (383)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (383)
-..| .-||.+.- .|++ ..+.
T Consensus 107 -------------------d~~g-----g~IWsiai--------------------------------~p~~----~~l~ 126 (691)
T KOG2048|consen 107 -------------------DSNG-----GAIWSIAI--------------------------------NPEN----TILA 126 (691)
T ss_pred -------------------cCCC-----cceeEEEe--------------------------------CCcc----ceEE
Confidence 0000 11243210 0000 1245
Q ss_pred EEeCCCcEEEEeCCCCCCce-eeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee---c-CCCC
Q 016769 235 AGYEDGSILVWDIRNPGIPL-TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN---L-ERPG 309 (383)
Q Consensus 235 sg~~dg~i~~wdl~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~---~-~~~~ 309 (383)
.|++||.+..+++..+.... ..+......+.+++|++++..++.|+.||.|++||....+.......... . +.--
T Consensus 127 IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~i 206 (691)
T KOG2048|consen 127 IGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTI 206 (691)
T ss_pred eecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceE
Confidence 67778866666665432211 12333457899999999998899999999999999987654432221111 1 1122
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+.++.|-.++ .||+|.+-|+|.+||...+..+..++.|.+.|.+++-.+++.++++++.|+.|.-+...
T Consensus 207 VWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~ 275 (691)
T KOG2048|consen 207 VWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLT 275 (691)
T ss_pred EEEEEEeecC-cEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEec
Confidence 5667766554 78999999999999999999999999999999999999999999999999999877654
No 139
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.78 E-value=3.2e-17 Score=146.01 Aligned_cols=186 Identities=15% Similarity=0.228 Sum_probs=135.2
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
..++|+..++|+|||++...+...+.. +...+.++. |. +...++++++..|.|.|..+.+...
T Consensus 93 y~~sgG~~~~Vkiwdl~~kl~hr~lkd----------h~stvt~v~---YN----~~DeyiAsvs~gGdiiih~~~t~~~ 155 (673)
T KOG4378|consen 93 YEISGGQSGCVKIWDLRAKLIHRFLKD----------HQSTVTYVD---YN----NTDEYIASVSDGGDIIIHGTKTKQK 155 (673)
T ss_pred eeeccCcCceeeehhhHHHHHhhhccC----------CcceeEEEE---ec----CCcceeEEeccCCcEEEEecccCcc
Confidence 345667789999999985444333332 222332221 21 2233688899999999999887433
Q ss_pred ceeeeecc-ccCeEEEEEeCCCCce-EEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC-cEEEEEeCCC
Q 016769 253 PLTAMKVH-LEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KIAATAGWDR 329 (383)
Q Consensus 253 ~~~~~~~h-~~~v~~~~~~~~~~~~-~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-~~l~s~~~dg 329 (383)
...++.. ...|+-+.+++..+.+ .+++.+|.|.+||.+.......+ .+.|.....+++|+|.. ..|++.+.|+
T Consensus 156 -tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~---~~~HsAP~~gicfspsne~l~vsVG~Dk 231 (673)
T KOG4378|consen 156 -TTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHA---SEAHSAPCRGICFSPSNEALLVSVGYDK 231 (673)
T ss_pred -ccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccch---hhhccCCcCcceecCCccceEEEecccc
Confidence 2334433 3456788888887764 56788999999999865433222 34566678899999865 5899999999
Q ss_pred cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 330 RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+|.+||....+...++- +..+..+|+|+++|-+|+.|+..|.|..||+..
T Consensus 232 ki~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~ 281 (673)
T KOG4378|consen 232 KINIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRS 281 (673)
T ss_pred eEEEeecccccccceee-ecCCcceeeecCCceEEEeecCCceEEEEeccc
Confidence 99999998777766663 566889999999999999999999999999964
No 140
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.77 E-value=3.7e-17 Score=141.76 Aligned_cols=298 Identities=19% Similarity=0.220 Sum_probs=185.2
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc---cccc--cccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSS--SWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
-+.+|++-|++|.|+.++++|+||+.|.+++||++.+.. .... +..|.+-..+.+++|.. +...+.+|+.+++
T Consensus 51 D~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~--~N~~~~SG~~~~~ 128 (609)
T KOG4227|consen 51 DVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDL--ENRFLYSGERWGT 128 (609)
T ss_pred hhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEcc--CCeeEecCCCcce
Confidence 467999999999999999999999999999999986531 1122 22333334688888875 4567889999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
|.+.|+++.+.+. +.. .. .....+|. +. .++
T Consensus 129 VI~HDiEt~qsi~-----V~~-------------~~------~~~~~VY~------------------------m~-~~P 159 (609)
T KOG4227|consen 129 VIKHDIETKQSIY-----VAN-------------EN------NNRGDVYH------------------------MD-QHP 159 (609)
T ss_pred eEeeecccceeee-----eec-------------cc------Ccccceee------------------------cc-cCC
Confidence 9999998764211 000 00 00000110 00 112
Q ss_pred CCCceeeeccCCcceEEEEecCCCC-eeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
.. ..++++ +.++.|.+||.+..+ .+..+-. ...+.- ....-|.|.. ...+++.+..+-+-+||
T Consensus 160 ~D-N~~~~~-t~~~~V~~~D~Rd~~~~~~~~~~---------AN~~~~--F~t~~F~P~~---P~Li~~~~~~~G~~~~D 223 (609)
T KOG4227|consen 160 TD-NTLIVV-TRAKLVSFIDNRDRQNPISLVLP---------ANSGKN--FYTAEFHPET---PALILVNSETGGPNVFD 223 (609)
T ss_pred CC-ceEEEE-ecCceEEEEeccCCCCCCceeee---------cCCCcc--ceeeeecCCC---ceeEEeccccCCCCcee
Confidence 22 223433 557899999997755 2211100 000111 1111244432 23567788888999999
Q ss_pred CCCCCCceee------eeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec----CCCCeEEEEEC
Q 016769 247 IRNPGIPLTA------MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL----ERPGISGTSIR 316 (383)
Q Consensus 247 l~~~~~~~~~------~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~----~~~~i~~~~~~ 316 (383)
++.+..++.. ++.....-...-|++.+..+++--...--.+||+-...+.. ++..... ....+.+++|-
T Consensus 224 ~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V-~k~D~N~~GY~N~~T~KS~~F~ 302 (609)
T KOG4227|consen 224 RRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFV-LKSDHNPNGYCNIKTIKSMTFI 302 (609)
T ss_pred eccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeeccccee-EeccCCCCcceeeeeeeeeeee
Confidence 9987554321 11111111345678888888776555555677876433222 2111111 11124456675
Q ss_pred CCCcEEEEEeCCCcEEEEEcCC----------C-------------ceEEEecccccceeEEEEeCCCCEEEEEeCCCcE
Q 016769 317 PDSKIAATAGWDRRVRIYNYRK----------G-------------SALAILKYHHATCNAVSFSSDCKLMASASEDSTV 373 (383)
Q Consensus 317 p~~~~l~s~~~dg~i~iwd~~~----------~-------------~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i 373 (383)
+...+++|+.+-.|++|.+.. | +.+..+++|..-++.|.|+|-..+|++.+-...+
T Consensus 303 -~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~ 381 (609)
T KOG4227|consen 303 -DDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSF 381 (609)
T ss_pred -cceeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhhhe
Confidence 344599999999999998843 1 1245788999999999999999999999999999
Q ss_pred EEEeCC
Q 016769 374 ALWELY 379 (383)
Q Consensus 374 ~~w~~~ 379 (383)
+||.-+
T Consensus 382 KlWS~~ 387 (609)
T KOG4227|consen 382 KLWSDH 387 (609)
T ss_pred eccccc
Confidence 999654
No 141
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.77 E-value=1.7e-16 Score=132.92 Aligned_cols=152 Identities=22% Similarity=0.323 Sum_probs=112.9
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
++.+++-|.++++||..+-+..-.+..+..+.+-..++ +.+. ...+++|..|-+|++-|+.++.
T Consensus 116 mFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp----~a~s-----------HcLiA~gtr~~~VrLCDi~SGs- 179 (397)
T KOG4283|consen 116 MFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSP----MAMS-----------HCLIAAGTRDVQVRLCDIASGS- 179 (397)
T ss_pred eeecccccceEEEeecccceeeEEeecCceeehhhcCh----hhhc-----------ceEEEEecCCCcEEEEeccCCc-
Confidence 45677889999999999988666665544433322111 1110 0146678999999999999854
Q ss_pred ceeeeeccccCeEEEEEeCCCCc-eEEEEcCCcEEEEEccCCCCeeE-Ee----------eeeecCCCCeEEEEECCCCc
Q 016769 253 PLTAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHSTGSCV-IK----------KEINLERPGISGTSIRPDSK 320 (383)
Q Consensus 253 ~~~~~~~h~~~v~~~~~~~~~~~-~~s~~~d~~i~~wdl~~~~~~~~-~~----------~~~~~~~~~i~~~~~~p~~~ 320 (383)
..+.+.+|...|..+.|+|.... +++|+.|++|++||++.-++-.. +. +.-..+.+.+++++|+.++.
T Consensus 180 ~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~ 259 (397)
T KOG4283|consen 180 FSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDAR 259 (397)
T ss_pred ceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccch
Confidence 46889999999999999998885 68999999999999975432211 11 11123556799999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCc
Q 016769 321 IAATAGWDRRVRIYNYRKGS 340 (383)
Q Consensus 321 ~l~s~~~dg~i~iwd~~~~~ 340 (383)
++++.+.|.++++|+..+|+
T Consensus 260 ~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 260 YLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred hhhhccCccceEEeecccCc
Confidence 99999999999999998764
No 142
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.77 E-value=4.6e-16 Score=143.52 Aligned_cols=303 Identities=17% Similarity=0.240 Sum_probs=186.7
Q ss_pred CCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
.++...+..-.+.|++||.+|.++.|+.|++||.+...+...++.............+.++.+.++ +.++++|+.||.
T Consensus 100 lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~--~~~i~~Gs~Dg~ 177 (691)
T KOG2048|consen 100 LKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPT--GTKIAGGSIDGV 177 (691)
T ss_pred CceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCC--ccEEEecccCce
Confidence 345556666678999999999999999999999888777665543322111123357889999984 577999999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
||+||+..+... .+.+.+ ..-.... .+ +......+-.
T Consensus 178 Iriwd~~~~~t~-----~~~~~~-----~d~l~k~--------~~-------------------------~iVWSv~~Lr 214 (691)
T KOG2048|consen 178 IRIWDVKSGQTL-----HIITMQ-----LDRLSKR--------EP-------------------------TIVWSVLFLR 214 (691)
T ss_pred EEEEEcCCCceE-----EEeeec-----ccccccC--------Cc-------------------------eEEEEEEEee
Confidence 999999876421 110000 0000000 00 0000001112
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
++ .+++|+..|+|++||-.++.++.... .++..++|+++.. ....+++++.|+.|..+..
T Consensus 215 d~---tI~sgDS~G~V~FWd~~~gTLiqS~~----------~h~adVl~Lav~~-------~~d~vfsaGvd~~ii~~~~ 274 (691)
T KOG2048|consen 215 DS---TIASGDSAGTVTFWDSIFGTLIQSHS----------CHDADVLALAVAD-------NEDRVFSAGVDPKIIQYSL 274 (691)
T ss_pred cC---cEEEecCCceEEEEcccCcchhhhhh----------hhhcceeEEEEcC-------CCCeEEEccCCCceEEEEe
Confidence 22 45778888999999998887654432 1234567776531 2236889999999999887
Q ss_pred CCCCC---ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCC------------------------------
Q 016769 248 RNPGI---PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST------------------------------ 294 (383)
Q Consensus 248 ~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~------------------------------ 294 (383)
...+. .......|...|++|++-+. .+++||.|.++.+-......
T Consensus 275 ~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~~v~~a~~~~L~~~w~~ 352 (691)
T KOG2048|consen 275 TTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSREFKNMDHRQKNLFPASDRVSVAPENRLLVLWKA 352 (691)
T ss_pred cCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccccccCchhhhccccccccceeecCccceEEEEecc
Confidence 65432 12234568888888888654 56788888777664332100
Q ss_pred ------------------CeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEc--------------------
Q 016769 295 ------------------GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY-------------------- 336 (383)
Q Consensus 295 ------------------~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~-------------------- 336 (383)
-..+++ ....+...|.+.+.+|+|+.++.+. =.+.+||.+
T Consensus 353 h~v~lwrlGS~~~~g~~~~~~Llk-l~~k~~~nIs~~aiSPdg~~Ia~st-~~~~~iy~L~~~~~vk~~~v~~~~~~~~~ 430 (691)
T KOG2048|consen 353 HGVDLWRLGSVILQGEYNYIHLLK-LFTKEKENISCAAISPDGNLIAIST-VSRTKIYRLQPDPNVKVINVDDVPLALLD 430 (691)
T ss_pred ccccceeccCcccccccChhhhee-eecCCccceeeeccCCCCCEEEEee-ccceEEEEeccCcceeEEEeccchhhhcc
Confidence 000000 0011223478889999999888766 112223322
Q ss_pred ----------------------------CCC--ceEEEe--cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 337 ----------------------------RKG--SALAIL--KYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 337 ----------------------------~~~--~~~~~~--~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.++ +.+..+ ++-...|..+..||||+++|..+.++.|.+||+.
T Consensus 431 a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl~ 505 (691)
T KOG2048|consen 431 ASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTRGQIFVYNLE 505 (691)
T ss_pred ceeeEEEecCceEEEEecccceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEeccceEEEEEcc
Confidence 111 111111 1234568889999999999999999999999985
No 143
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.76 E-value=2.3e-18 Score=160.70 Aligned_cols=147 Identities=16% Similarity=0.264 Sum_probs=121.2
Q ss_pred EEEEEeCCCcEEEEeCCCCC--CceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 232 NVLAGYEDGSILVWDIRNPG--IPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~--~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
.+++++..|.|-+||+.... ..+..++.|...+.++.|++.-. .+++|+.|+.|++||++........ .....
T Consensus 102 lIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~----~~nSE 177 (839)
T KOG0269|consen 102 LIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTF----RSNSE 177 (839)
T ss_pred hheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccc----cccch
Confidence 57789999999999997632 23456789999999999977654 5789999999999999865433222 22446
Q ss_pred CeEEEEECCC-CcEEEEEeCCCcEEEEEcCCCce-EEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCCC
Q 016769 309 GISGTSIRPD-SKIAATAGWDRRVRIYNYRKGSA-LAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPPH 382 (383)
Q Consensus 309 ~i~~~~~~p~-~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~~ 382 (383)
.|..+.|+|. +.+|+++...|.+++||++...+ ...+.+|.++|.|+.|+|++.+|||||+|++|+|||+.+++
T Consensus 178 SiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~ 253 (839)
T KOG0269|consen 178 SIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSR 253 (839)
T ss_pred hhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCC
Confidence 7999999985 56899999999999999987643 45677999999999999999999999999999999998665
No 144
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=1.3e-17 Score=150.83 Aligned_cols=263 Identities=21% Similarity=0.379 Sum_probs=160.5
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc--------cccccccccccceeeeeeecCCCCcceeEe
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--------TVSSSWVHSAAHGIVSVATGPSIGLNKVIS 81 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 81 (383)
+..+++.|.+.|++++|+|....|++++.||.+++|++.... .+..+..|. ..|.|++... ++..+.+
T Consensus 286 ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~--gPVl~v~v~~--n~~~~ys 361 (577)
T KOG0642|consen 286 IKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHE--GPVLCVVVPS--NGEHCYS 361 (577)
T ss_pred eeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEeccc--CceEEEEecC--CceEEEe
Confidence 445899999999999999999999999999999999983211 122223333 4578888876 4789999
Q ss_pred cccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccce
Q 016769 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEI 161 (383)
Q Consensus 82 ~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (383)
||-||+||.|++....- ++. .++ .....
T Consensus 362 gg~Dg~I~~w~~p~n~d-----------------------p~d----------s~d----p~vl~--------------- 389 (577)
T KOG0642|consen 362 GGIDGTIRCWNLPPNQD-----------------------PDD----------SYD----PSVLS--------------- 389 (577)
T ss_pred eccCceeeeeccCCCCC-----------------------ccc----------ccC----cchhc---------------
Confidence 99999999999862210 000 000 00000
Q ss_pred ecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCc
Q 016769 162 IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS 241 (383)
Q Consensus 162 ~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~ 241 (383)
+ .+ .|-. =.+|-+ .++. ...++++|+.||+
T Consensus 390 -------~--~l--~Ght---davw~l--------------------------------~~s~----~~~~Llscs~DgT 419 (577)
T KOG0642|consen 390 -------G--TL--LGHT---DAVWLL--------------------------------ALSS----TKDRLLSCSSDGT 419 (577)
T ss_pred -------c--ce--eccc---cceeee--------------------------------eecc----cccceeeecCCce
Confidence 0 00 0110 011211 0100 0114777888888
Q ss_pred EEEEeCCCCCCc-eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEE---EEccCCCCeeEEeeee---ecCCCCeEEEE
Q 016769 242 ILVWDIRNPGIP-LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVL---YNLDHSTGSCVIKKEI---NLERPGISGTS 314 (383)
Q Consensus 242 i~~wdl~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~---wdl~~~~~~~~~~~~~---~~~~~~i~~~~ 314 (383)
+++|+......+ +...+.|. .-..+.+-.+....+. .+.+... ++++..+....+.... ......++-+.
T Consensus 420 vr~w~~~~~~~~~f~~~~e~g-~Plsvd~~ss~~a~~~--~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vV 496 (577)
T KOG0642|consen 420 VRLWEPTEESPCTFGEPKEHG-YPLSVDRTSSRPAHSL--ASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVV 496 (577)
T ss_pred EEeeccCCcCccccCCccccC-CcceEeeccchhHhhh--hhcccccccchhhhhhhheeeccccCCCcccccCccceEE
Confidence 888876543221 11112222 2233433222111111 1222222 2222211111110000 00113466777
Q ss_pred ECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 315 IRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 315 ~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
.+|...+.+++..|+.|++||..+++.+.....|...+.++++-|+|.+|++|+.||.|++|++..+
T Consensus 497 s~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k 563 (577)
T KOG0642|consen 497 SHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVK 563 (577)
T ss_pred ecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccch
Confidence 8899999999999999999999999999888899999999999999999999999999999998644
No 145
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.76 E-value=7.4e-17 Score=136.23 Aligned_cols=205 Identities=20% Similarity=0.367 Sum_probs=145.9
Q ss_pred CeeeeeecCCceeeEEEeCCCC--eEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 10 PVAVLRGHRASVTDVCFHQTKP--ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~--~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
....|..|.+.|+++.|.++.. .|+||++||.|.+|++..=.++..++.|. +.+..+++.|+ +...+|.|.|++
T Consensus 75 qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~--~~Vt~lsiHPS--~KLALsVg~D~~ 150 (362)
T KOG0294|consen 75 QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHK--GQVTDLSIHPS--GKLALSVGGDQV 150 (362)
T ss_pred hhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccc--cccceeEecCC--CceEEEEcCCce
Confidence 4567889999999999998876 89999999999999998777777777765 34888999995 456679999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
+|+||+-+|+... + ..+ +... -...+.+
T Consensus 151 lr~WNLV~Gr~a~-------------v-~~L-~~~a-------------------------------------t~v~w~~ 178 (362)
T KOG0294|consen 151 LRTWNLVRGRVAF-------------V-LNL-KNKA-------------------------------------TLVSWSP 178 (362)
T ss_pred eeeehhhcCccce-------------e-ecc-CCcc-------------------------------------eeeEEcC
Confidence 9999998774210 0 000 0000 0011223
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
.|.+|.+ .+. +.|-+|.+++......+.. +.+.+|... .. ...+++|..|+.|++||.
T Consensus 179 ~Gd~F~v-~~~--~~i~i~q~d~A~v~~~i~~-----------~~r~l~~~~---l~-----~~~L~vG~d~~~i~~~D~ 236 (362)
T KOG0294|consen 179 QGDHFVV-SGR--NKIDIYQLDNASVFREIEN-----------PKRILCATF---LD-----GSELLVGGDNEWISLKDT 236 (362)
T ss_pred CCCEEEE-Eec--cEEEEEecccHhHhhhhhc-----------cccceeeee---cC-----CceEEEecCCceEEEecc
Confidence 4444433 332 4789999887654333321 124444332 11 125889999999999998
Q ss_pred CCCCCceeeeeccccCeEEEEE--eCCCCceEEEEcCCcEEEEEccCC
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSI--DESCNGGISGGADQKIVLYNLDHS 293 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~s~~~d~~i~~wdl~~~ 293 (383)
.+ ..+...+.+|...|..+.+ .+..-++++++.||.|++||++..
T Consensus 237 ds-~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 237 DS-DTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred CC-CccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 76 5678889999999999885 566668899999999999999754
No 146
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.75 E-value=5.1e-17 Score=144.94 Aligned_cols=188 Identities=21% Similarity=0.339 Sum_probs=140.4
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
++|. -|+++|. -.++-||||.......+.+-.. ....|.++ +..| +.+..++|..||.|.|||
T Consensus 475 pdgr-tLivGGe-astlsiWDLAapTprikaelts----------sapaCyAL-a~sp----DakvcFsccsdGnI~vwD 537 (705)
T KOG0639|consen 475 PDGR-TLIVGGE-ASTLSIWDLAAPTPRIKAELTS----------SAPACYAL-AISP----DAKVCFSCCSDGNIAVWD 537 (705)
T ss_pred CCCc-eEEeccc-cceeeeeeccCCCcchhhhcCC----------cchhhhhh-hcCC----ccceeeeeccCCcEEEEE
Confidence 4554 4666666 5799999998876432222100 01112221 1222 233567899999999999
Q ss_pred CCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe
Q 016769 247 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG 326 (383)
Q Consensus 247 l~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~ 326 (383)
|.+ ...++.+++|.+.+.|+.++.++..+-+||-|++++.||++.. +..+.. -..+.|.++...|++..++.|=
T Consensus 538 Lhn-q~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlreg--rqlqqh---dF~SQIfSLg~cP~~dWlavGM 611 (705)
T KOG0639|consen 538 LHN-QTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREG--RQLQQH---DFSSQIFSLGYCPTGDWLAVGM 611 (705)
T ss_pred ccc-ceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhh--hhhhhh---hhhhhheecccCCCccceeeec
Confidence 997 4557889999999999999999999999999999999999743 222211 1235688899999999999999
Q ss_pred CCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 327 WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.++.+-+......+.+ .+--|+..|.++.|++-|+++++.+.|+.+..|..
T Consensus 612 ens~vevlh~skp~ky-qlhlheScVLSlKFa~cGkwfvStGkDnlLnawrt 662 (705)
T KOG0639|consen 612 ENSNVEVLHTSKPEKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 662 (705)
T ss_pred ccCcEEEEecCCccce-eecccccEEEEEEecccCceeeecCchhhhhhccC
Confidence 9999888777655544 55569999999999999999999999999999976
No 147
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.74 E-value=1.7e-16 Score=134.20 Aligned_cols=116 Identities=21% Similarity=0.374 Sum_probs=93.7
Q ss_pred ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcC-
Q 016769 259 VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR- 337 (383)
Q Consensus 259 ~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~- 337 (383)
.|.-++..+.+...+.++++++.|..|.+|++..+ .+ ..+...+..-...+++|+|+++|+++.---|++|.+-
T Consensus 185 kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq---~L--~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f 259 (420)
T KOG2096|consen 185 KHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQ---LL--QSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIF 259 (420)
T ss_pred hcccceEEEeecCCceEEEEecCCCcEEEEecCCc---ee--eeeccccccccceeeCCCCcEEEEecCCCCceEEEEEe
Confidence 45667777777777888999999999999999732 22 2233333445667899999999999999999999983
Q ss_pred --CCc-----eEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 338 --KGS-----ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 338 --~~~-----~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+|. .+..++||+..|.+++|||+...++|.|.||.++|||..
T Consensus 260 ~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 260 TKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred ccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 332 345788999999999999999999999999999999974
No 148
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.74 E-value=3.9e-17 Score=158.74 Aligned_cols=249 Identities=21% Similarity=0.384 Sum_probs=169.3
Q ss_pred CceeeEEEeCCCCe----EEEecCCCeEEEeeCccc---cc---ccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 19 ASVTDVCFHQTKPI----LFAGTTGGELRIWDTVQH---RT---VSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 19 ~~V~~v~f~~~~~~----L~sgs~D~~v~vW~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
..-+.++|.+.|+. ||.|.+||.|.+||...- .. +.....|. +.|..+.|.+. .++.|+||++||.|
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~--G~V~gLDfN~~-q~nlLASGa~~geI 141 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHT--GPVLGLDFNPF-QGNLLASGADDGEI 141 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccC--Cceeeeecccc-CCceeeccCCCCcE
Confidence 34577888887665 999999999999997542 11 12222332 45777888875 56799999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
.|||+.+.+..-.+. . . .-...+....+.. ++
T Consensus 142 ~iWDlnn~~tP~~~~------~-----------~-------~~~~eI~~lsWNr-----------------kv------- 173 (1049)
T KOG0307|consen 142 LIWDLNKPETPFTPG------S-----------Q-------APPSEIKCLSWNR-----------------KV------- 173 (1049)
T ss_pred EEeccCCcCCCCCCC------C-----------C-------CCcccceEeccch-----------------hh-------
Confidence 999998754211100 0 0 0000000001100 00
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC---cEEEE
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG---SILVW 245 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg---~i~~w 245 (383)
.-++++++.++.+-|||++..+.+..+.. ...+.+|..+ .+.|+.. ..++++++|. .|.+|
T Consensus 174 --qhILAS~s~sg~~~iWDlr~~~pii~ls~----------~~~~~~~S~l-~WhP~~a---Tql~~As~dd~~PviqlW 237 (1049)
T KOG0307|consen 174 --SHILASGSPSGRAVIWDLRKKKPIIKLSD----------TPGRMHCSVL-AWHPDHA---TQLLVASGDDSAPVIQLW 237 (1049)
T ss_pred --hHHhhccCCCCCceeccccCCCccccccc----------CCCccceeee-eeCCCCc---eeeeeecCCCCCceeEee
Confidence 11455667778999999999887665532 1223445444 4666543 3466666555 48999
Q ss_pred eCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE
Q 016769 246 DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 246 dl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
|+|....+++.+++|...|.+++|.+. |..+++++
T Consensus 238 DlR~assP~k~~~~H~~GilslsWc~~---------------------------------------------D~~lllSs 272 (1049)
T KOG0307|consen 238 DLRFASSPLKILEGHQRGILSLSWCPQ---------------------------------------------DPRLLLSS 272 (1049)
T ss_pred cccccCCchhhhcccccceeeeccCCC---------------------------------------------Cchhhhcc
Confidence 998877777777777766666655432 33678888
Q ss_pred eCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 326 GWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
+.|++|.+|+.++++.+..+....+++..+.|+|... .++.++-||.|.|+.+.
T Consensus 273 gkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~ 327 (1049)
T KOG0307|consen 273 GKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQ 327 (1049)
T ss_pred cCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeee
Confidence 8999999999999999998887788999999999887 89999999999999874
No 149
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.74 E-value=9.9e-16 Score=129.93 Aligned_cols=284 Identities=18% Similarity=0.222 Sum_probs=179.8
Q ss_pred eEEEeCCCCeEEEecCCCeEEEeeCccc----c----ccccc--ccccc-cceeeeeeec-----CCCCcceeEecccCC
Q 016769 23 DVCFHQTKPILFAGTTGGELRIWDTVQH----R----TVSSS--WVHSA-AHGIVSVATG-----PSIGLNKVISQGRDG 86 (383)
Q Consensus 23 ~v~f~~~~~~L~sgs~D~~v~vW~~~~~----~----~~~~~--~~~~~-~~~~~~~~~~-----~~~~~~~l~s~~~D~ 86 (383)
.+.++|||..|++-++|..+++|++... + ..... ..+.. +.-+...++. .....+.+++.+.|.
T Consensus 54 gckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~ 133 (406)
T KOG2919|consen 54 GCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQ 133 (406)
T ss_pred cceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccC
Confidence 4578999999999999999999997431 1 11110 01111 1112233332 112346788899999
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
-|++||.-+|+... +++.+ . ... +. .......++
T Consensus 134 PIh~wdaftG~lra---------Sy~~y--d---h~d------------------e~--------------taAhsL~Fs 167 (406)
T KOG2919|consen 134 PIHLWDAFTGKLRA---------SYRAY--D---HQD------------------EY--------------TAAHSLQFS 167 (406)
T ss_pred ceeeeecccccccc---------chhhh--h---hHH------------------hh--------------hhheeEEec
Confidence 99999998875311 00000 0 000 00 011123456
Q ss_pred CCCCceeeeccCCcceEEEEec-CCCCe--eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDL-NTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl-~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
++|.++ ++ | ..+.||++|+ +.+.. +....... .+.-.+ +.+..+|.|.... .+..|+...++-
T Consensus 168 ~DGeql-fa-G-ykrcirvFdt~RpGr~c~vy~t~~~~-----k~gq~g---iisc~a~sP~~~~---~~a~gsY~q~~g 233 (406)
T KOG2919|consen 168 PDGEQL-FA-G-YKRCIRVFDTSRPGRDCPVYTTVTKG-----KFGQKG---IISCFAFSPMDSK---TLAVGSYGQRVG 233 (406)
T ss_pred CCCCeE-ee-c-ccceEEEeeccCCCCCCcchhhhhcc-----cccccc---eeeeeeccCCCCc---ceeeecccceee
Confidence 777654 32 3 4679999999 44331 11111000 111122 2333446665432 356688888888
Q ss_pred EEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc-CCcEEEEEccCCCCeeEEeeeeecCC---CCeEEEEECCCC
Q 016769 244 VWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINLER---PGISGTSIRPDS 319 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~~~~~~~~~---~~i~~~~~~p~~ 319 (383)
|+.-.. ..|+..+-+|..-|+.+.|.++++.+++|+. |..|..||++..... + ..+..+. +.---+.+.|++
T Consensus 234 iy~~~~-~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~p-v--~~L~rhv~~TNQRI~FDld~~~ 309 (406)
T KOG2919|consen 234 IYNDDG-RRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDP-V--YALERHVGDTNQRILFDLDPKG 309 (406)
T ss_pred eEecCC-CCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccch-h--hhhhhhccCccceEEEecCCCC
Confidence 876443 5678888899999999999999999998874 778999999753211 1 1112221 222345567999
Q ss_pred cEEEEEeCCCcEEEEEcCC-CceEEEecccccceeEEEEeCCCCEEEEEeCC
Q 016769 320 KIAATAGWDRRVRIYNYRK-GSALAILKYHHATCNAVSFSSDCKLMASASED 370 (383)
Q Consensus 320 ~~l~s~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~v~~spd~~~las~s~d 370 (383)
+.|++|+.||.|++||+.+ +.....+..|...|+.|+++|--+++|++|..
T Consensus 310 ~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 310 EILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred ceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCc
Confidence 9999999999999999988 77777888899999999999998899998865
No 150
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.73 E-value=9.4e-16 Score=149.90 Aligned_cols=308 Identities=16% Similarity=0.273 Sum_probs=179.0
Q ss_pred CeeeeeecCCceeeEEEeCCC-CeEEEecCCCeEEEeeCcccccc---cc--cccccccceeeeeeecCCCCcceeEecc
Q 016769 10 PVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTV---SS--SWVHSAAHGIVSVATGPSIGLNKVISQG 83 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~-~~L~sgs~D~~v~vW~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 83 (383)
.++.|+.|+..|..++.+++. .+++|||.||+||+||...-..- .. +.-+.....+.++.... ++..++.++
T Consensus 1040 lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~--~~~~~Av~t 1117 (1431)
T KOG1240|consen 1040 LVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCG--NGDQFAVST 1117 (1431)
T ss_pred EeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEecc--CCCeEEEEc
Confidence 567899999999999998765 89999999999999997432111 11 00111223456666665 357889889
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.||.|++.+++.-+.... .+..... +.. .. . +...-+.
T Consensus 1118 ~DG~v~~~~id~~~~~~~-----------~~~~~ri--~n~-------~~------~----------------g~vv~m~ 1155 (1431)
T KOG1240|consen 1118 KDGSVRVLRIDHYNVSKR-----------VATQVRI--PNL-------KK------D----------------GVVVSMH 1155 (1431)
T ss_pred CCCeEEEEEccccccccc-----------eeeeeec--ccc-------cC------C----------------CceEEee
Confidence 999999999864211000 0000000 000 00 0 0000011
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
.+....+..+++.+...+-|-.||++....+.+++.+. ..|++.++. .+ ....++++|+..|.+.
T Consensus 1156 a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~----------~hG~vTSi~---id--p~~~WlviGts~G~l~ 1220 (1431)
T KOG1240|consen 1156 AFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQL----------RHGLVTSIV---ID--PWCNWLVIGTSRGQLV 1220 (1431)
T ss_pred cccccccceeEEEEEeccceEEecchhhhhHHhhhcCc----------cccceeEEE---ec--CCceEEEEecCCceEE
Confidence 11111111133444555678999998876555554321 123333322 11 1234799999999999
Q ss_pred EEeCCCCCCceeeee-ccccCeEEEEEeCCCC---ceEEEE--cCCcEEEEEccCCCCeeEEeee-----ee----cC--
Q 016769 244 VWDIRNPGIPLTAMK-VHLEPVLCLSIDESCN---GGISGG--ADQKIVLYNLDHSTGSCVIKKE-----IN----LE-- 306 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~-~h~~~v~~~~~~~~~~---~~~s~~--~d~~i~~wdl~~~~~~~~~~~~-----~~----~~-- 306 (383)
+||+|- +.++...+ .+..++..+..++... ..++++ ..+.+.+|++..+.++..+... +. ..
T Consensus 1221 lWDLRF-~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~ 1299 (1431)
T KOG1240|consen 1221 LWDLRF-RVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDA 1299 (1431)
T ss_pred EEEeec-CceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccC
Confidence 999996 34443332 3345777777766554 233333 4677999999877655444321 00 00
Q ss_pred --CCC--eEEEEECCCCcEEEEEeCCCcEEEEEcCCCce-----------------------------------------
Q 016769 307 --RPG--ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA----------------------------------------- 341 (383)
Q Consensus 307 --~~~--i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~----------------------------------------- 341 (383)
... .....+..-+.++.+|+.|.+||.||......
T Consensus 1300 ~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~ 1379 (1431)
T KOG1240|consen 1300 RKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVG 1379 (1431)
T ss_pred CCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhhhhhhhcC
Confidence 000 11122333345899999999999999853210
Q ss_pred -------EE--------EecccccceeEEEEeCC-CCEEEEEeCCCcEEEEe
Q 016769 342 -------LA--------ILKYHHATCNAVSFSSD-CKLMASASEDSTVALWE 377 (383)
Q Consensus 342 -------~~--------~~~~h~~~v~~v~~spd-~~~las~s~d~~i~~w~ 377 (383)
.. .-.+|...|.++++.-. ..+|+++++||.|+||.
T Consensus 1380 ~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1380 LTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred chhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 00 11257778888887543 35999999999999994
No 151
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.72 E-value=2.7e-15 Score=129.68 Aligned_cols=140 Identities=20% Similarity=0.279 Sum_probs=106.8
Q ss_pred EEEEEeCCCcEEEEeCCCC-CCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 232 NVLAGYEDGSILVWDIRNP-GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
.+++|+-||+|+|||+|+. ..+.-..+.|...|+.++|+.....+++|+.||+++||||+..+... -....+.|...|
T Consensus 272 vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~-pVA~fk~Hk~pI 350 (440)
T KOG0302|consen 272 VFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQ-PVATFKYHKAPI 350 (440)
T ss_pred eEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCC-cceeEEeccCCe
Confidence 4678999999999999975 22333448999999999998888888999999999999997644321 113456788899
Q ss_pred EEEEECCCC-cEEEEEeCCCcEEEEEcCCC-------------------ceEEEecccccceeEEEEeCCCC-EEEEEeC
Q 016769 311 SGTSIRPDS-KIAATAGWDRRVRIYNYRKG-------------------SALAILKYHHATCNAVSFSSDCK-LMASASE 369 (383)
Q Consensus 311 ~~~~~~p~~-~~l~s~~~dg~i~iwd~~~~-------------------~~~~~~~~h~~~v~~v~~spd~~-~las~s~ 369 (383)
+++.|+|.. ..|++++.|..|.|||+..- +.+...+ -++.+..+.|++.-+ +|++.+.
T Consensus 351 tsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHq-GQke~KevhWH~QiPG~lvsTa~ 429 (440)
T KOG0302|consen 351 TSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQ-GQKEVKEVHWHRQIPGLLVSTAI 429 (440)
T ss_pred eEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEec-chhHhhhheeccCCCCeEEEecc
Confidence 999999864 67888999999999999421 0111212 134688899998766 8999999
Q ss_pred CCcE
Q 016769 370 DSTV 373 (383)
Q Consensus 370 d~~i 373 (383)
||.-
T Consensus 430 dGfn 433 (440)
T KOG0302|consen 430 DGFN 433 (440)
T ss_pred ccee
Confidence 9843
No 152
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=1.8e-16 Score=145.73 Aligned_cols=183 Identities=21% Similarity=0.297 Sum_probs=138.9
Q ss_pred eeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
.++++- ...|.+|+-.++........+ .....++ .+.++ ..++++|..+|.|.|||..+..
T Consensus 190 ~laVal--g~~vylW~~~s~~v~~l~~~~------------~~~vtSv-~ws~~----G~~LavG~~~g~v~iwD~~~~k 250 (484)
T KOG0305|consen 190 VLAVAL--GQSVYLWSASSGSVTELCSFG------------EELVTSV-KWSPD----GSHLAVGTSDGTVQIWDVKEQK 250 (484)
T ss_pred eEEEEe--cceEEEEecCCCceEEeEecC------------CCceEEE-EECCC----CCEEEEeecCCeEEEEehhhcc
Confidence 444442 247999999887732222210 1111122 23332 2368899999999999987644
Q ss_pred Cceeeeec-cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCc
Q 016769 252 IPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRR 330 (383)
Q Consensus 252 ~~~~~~~~-h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~ 330 (383)
. +..+.+ |...|-++++.. ..+.+|+.|+.|..+|+....... . .+..|...|+++.+++|++++|+|+.|+.
T Consensus 251 ~-~~~~~~~h~~rvg~laW~~--~~lssGsr~~~I~~~dvR~~~~~~--~-~~~~H~qeVCgLkws~d~~~lASGgnDN~ 324 (484)
T KOG0305|consen 251 K-TRTLRGSHASRVGSLAWNS--SVLSSGSRDGKILNHDVRISQHVV--S-TLQGHRQEVCGLKWSPDGNQLASGGNDNV 324 (484)
T ss_pred c-cccccCCcCceeEEEeccC--ceEEEecCCCcEEEEEEecchhhh--h-hhhcccceeeeeEECCCCCeeccCCCccc
Confidence 3 556667 899999999983 457889999999999997654222 1 24567788999999999999999999999
Q ss_pred EEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEE--EeCCCcEEEEeCC
Q 016769 331 VRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMAS--ASEDSTVALWELY 379 (383)
Q Consensus 331 i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las--~s~d~~i~~w~~~ 379 (383)
+.|||.....+...+..|.++|.+++|+|-.+ .||+ |+.|++|++||..
T Consensus 325 ~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~ 376 (484)
T KOG0305|consen 325 VFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTN 376 (484)
T ss_pred eEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcC
Confidence 99999988888889999999999999999655 8888 5689999999975
No 153
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.71 E-value=1.1e-15 Score=136.47 Aligned_cols=264 Identities=17% Similarity=0.247 Sum_probs=169.0
Q ss_pred ceeeEEEeCCC-CeEEEecCCCeEEEeeCccccc-ccccc-cccccceeeeeeecCCCCcceeEecccCCeEEEeecCCC
Q 016769 20 SVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRT-VSSSW-VHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (383)
Q Consensus 20 ~V~~v~f~~~~-~~L~sgs~D~~v~vW~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~ 96 (383)
.|.++++.... -.+++.+.|..+++|.-..... +..+. .... .-.|++... ...++++||..++|+|||+...
T Consensus 36 g~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s--~S~y~~sgG~~~~Vkiwdl~~k 111 (673)
T KOG4378|consen 36 GDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVACAS--QSLYEISGGQSGCVKIWDLRAK 111 (673)
T ss_pred cceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccc--hHHHHhhhh--cceeeeccCcCceeeehhhHHH
Confidence 37888887654 3567778889999998643311 11111 0111 112222221 2367899999999999999743
Q ss_pred CCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeec
Q 016769 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVA 176 (383)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (383)
.+.+ ....|.. .++ ... +.....| +++
T Consensus 112 l~hr-------~lkdh~s--tvt-----------------~v~--------------------------YN~~Dey-iAs 138 (673)
T KOG4378|consen 112 LIHR-------FLKDHQS--TVT-----------------YVD--------------------------YNNTDEY-IAS 138 (673)
T ss_pred HHhh-------hccCCcc--eeE-----------------EEE--------------------------ecCCcce-eEE
Confidence 2111 0000000 000 000 0000123 445
Q ss_pred cCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceee
Q 016769 177 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 256 (383)
Q Consensus 177 g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~ 256 (383)
++..|.|.|..+.+++....+..+. +. ..-...|.+.. +..+.+++++|.|.+||..........
T Consensus 139 vs~gGdiiih~~~t~~~tt~f~~~s----------gq--svRll~ys~sk---r~lL~~asd~G~VtlwDv~g~sp~~~~ 203 (673)
T KOG4378|consen 139 VSDGGDIIIHGTKTKQKTTTFTIDS----------GQ--SVRLLRYSPSK---RFLLSIASDKGAVTLWDVQGMSPIFHA 203 (673)
T ss_pred eccCCcEEEEecccCccccceecCC----------CC--eEEEeeccccc---ceeeEeeccCCeEEEEeccCCCcccch
Confidence 5667788888888877655443211 11 11122344432 235778999999999998764444556
Q ss_pred eeccccCeEEEEEeCCCCc-eEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEE
Q 016769 257 MKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 335 (383)
Q Consensus 257 ~~~h~~~v~~~~~~~~~~~-~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd 335 (383)
.+.|..|...++|+|.... +++.|.|..|.+||+..+...- .+.+ ....+.++|.++|.+|++|...|+|..||
T Consensus 204 ~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~----~l~y-~~Plstvaf~~~G~~L~aG~s~G~~i~YD 278 (673)
T KOG4378|consen 204 SEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTD----RLTY-SHPLSTVAFSECGTYLCAGNSKGELIAYD 278 (673)
T ss_pred hhhccCCcCcceecCCccceEEEecccceEEEeecccccccc----eeee-cCCcceeeecCCceEEEeecCCceEEEEe
Confidence 6789999999999988764 5788999999999987543221 2222 24578999999999999999999999999
Q ss_pred cCC-CceEEEecccccceeEEEEeCC
Q 016769 336 YRK-GSALAILKYHHATCNAVSFSSD 360 (383)
Q Consensus 336 ~~~-~~~~~~~~~h~~~v~~v~~spd 360 (383)
++. ..++.++..|...|.+|+|-|.
T Consensus 279 ~R~~k~Pv~v~sah~~sVt~vafq~s 304 (673)
T KOG4378|consen 279 MRSTKAPVAVRSAHDASVTRVAFQPS 304 (673)
T ss_pred cccCCCCceEeeecccceeEEEeeec
Confidence 975 5678888999999999999875
No 154
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.70 E-value=1e-15 Score=140.40 Aligned_cols=268 Identities=18% Similarity=0.226 Sum_probs=153.9
Q ss_pred EEEeC---CCCeEEEecCCCeEEEeeCccccc------ccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecC
Q 016769 24 VCFHQ---TKPILFAGTTGGELRIWDTVQHRT------VSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (383)
Q Consensus 24 v~f~~---~~~~L~sgs~D~~v~vW~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~ 94 (383)
..|++ ....||-+-+||.|.++|...... +.....|.. .+.-+.+.| +...|++++.|.|+|+||++
T Consensus 55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~n--AifDl~wap--ge~~lVsasGDsT~r~Wdvk 130 (720)
T KOG0321|consen 55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKN--AIFDLKWAP--GESLLVSASGDSTIRPWDVK 130 (720)
T ss_pred ccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccc--eeEeeccCC--CceeEEEccCCceeeeeeec
Confidence 45543 346899999999999999754221 111112322 244455555 56789999999999999998
Q ss_pred CCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceee
Q 016769 95 NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMA 174 (383)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (383)
+.++...-... | +...... ..+.+.. +.++
T Consensus 131 ~s~l~G~~~~~-----------------------------------G----------H~~SvkS----~cf~~~n-~~vF 160 (720)
T KOG0321|consen 131 TSRLVGGRLNL-----------------------------------G----------HTGSVKS----ECFMPTN-PAVF 160 (720)
T ss_pred cceeecceeec-----------------------------------c----------cccccch----hhhccCC-Ccce
Confidence 77542210000 0 0000000 1111222 3466
Q ss_pred eccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC---cEEEEeCCCCC
Q 016769 175 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG---SILVWDIRNPG 251 (383)
Q Consensus 175 ~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg---~i~~wdl~~~~ 251 (383)
+.|+.|+.+.|||++-... ..+... +. .+++...+ ..+. .+
T Consensus 161 ~tGgRDg~illWD~R~n~~-d~~e~~--------~~----------------------~~~~~~n~~ptpskp---~~-- 204 (720)
T KOG0321|consen 161 CTGGRDGEILLWDCRCNGV-DALEEF--------DN----------------------RIYGRHNTAPTPSKP---LK-- 204 (720)
T ss_pred eeccCCCcEEEEEEeccch-hhHHHH--------hh----------------------hhhccccCCCCCCch---hh--
Confidence 7888899999999865431 111100 00 00111110 0000 00
Q ss_pred Cceeeeeccc----cCeEEEEEeCCCCceEEEEc-CCcEEEEEccCCCCeeEEee----eeecC---CCCeEEEEECCCC
Q 016769 252 IPLTAMKVHL----EPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKK----EINLE---RPGISGTSIRPDS 319 (383)
Q Consensus 252 ~~~~~~~~h~----~~v~~~~~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~~~----~~~~~---~~~i~~~~~~p~~ 319 (383)
..+..-++|. ..|+.+.| .+...++++|. |+.|++|||........... ....+ ..++.++.+...|
T Consensus 205 kr~~k~kA~s~ti~ssvTvv~f-kDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssG 283 (720)
T KOG0321|consen 205 KRIRKWKAASNTIFSSVTVVLF-KDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSG 283 (720)
T ss_pred ccccccccccCceeeeeEEEEE-eccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCC
Confidence 0011112222 23445555 23356788777 99999999986543322211 11111 3457788888888
Q ss_pred cEEEEEeCCCcEEEEEcCCC--ceEEEecccccceeEE--EEeCCCCEEEEEeCCCcEEEEeCCCCC
Q 016769 320 KIAATAGWDRRVRIYNYRKG--SALAILKYHHATCNAV--SFSSDCKLMASASEDSTVALWELYPPH 382 (383)
Q Consensus 320 ~~l~s~~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~v--~~spd~~~las~s~d~~i~~w~~~~~~ 382 (383)
.++.+.+.|++|++||+.+- .+...+.++...-.-+ ..+||+.++++|+.|..+.+|.+.-|.
T Consensus 284 t~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e 350 (720)
T KOG0321|consen 284 TYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPE 350 (720)
T ss_pred CeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCcc
Confidence 99988899999999999653 3344555555433222 468999999999999999999997654
No 155
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.69 E-value=7.4e-15 Score=122.88 Aligned_cols=283 Identities=19% Similarity=0.246 Sum_probs=171.7
Q ss_pred eeeeecCCceeeEEEeC-CCCeEEEecCC-------CeEEEeeCcccccc---------cccccccccceeeeeeecCCC
Q 016769 12 AVLRGHRASVTDVCFHQ-TKPILFAGTTG-------GELRIWDTVQHRTV---------SSSWVHSAAHGIVSVATGPSI 74 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~-~~~~L~sgs~D-------~~v~vW~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 74 (383)
.+|..|.+.|+.|+-+| +.+.|+|+-.| ....||.+++.... ..+.. .....+.++.+.|
T Consensus 57 kvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldt-eavg~i~cvew~P-- 133 (370)
T KOG1007|consen 57 KVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDT-EAVGKINCVEWEP-- 133 (370)
T ss_pred hhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCH-HHhCceeeEEEcC--
Confidence 46778899999999999 55677776554 24789997653322 12211 1223577899999
Q ss_pred CcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccc
Q 016769 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKE 154 (383)
Q Consensus 75 ~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (383)
++.++++-. |+.|.+|+++++..+. .. +..+.... ...
T Consensus 134 ns~klasm~-dn~i~l~~l~ess~~v---ae-------------v~ss~s~e----~~~--------------------- 171 (370)
T KOG1007|consen 134 NSDKLASMD-DNNIVLWSLDESSKIV---AE-------------VLSSESAE----MRH--------------------- 171 (370)
T ss_pred CCCeeEEec-cCceEEEEcccCcchh---ee-------------eccccccc----ccc---------------------
Confidence 456777655 8999999998763110 00 00000000 000
Q ss_pred cCCccceecccC--CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceE
Q 016769 155 SNRSFEIIDDVP--AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVN 232 (383)
Q Consensus 155 ~~~~~~~~~~~~--~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (383)
.......+ .++. .+++. .+++++.||+++..+...+... + +...--..|.|+. .-.
T Consensus 172 ----~ftsg~WspHHdgn-qv~tt--~d~tl~~~D~RT~~~~~sI~dA-H-----------gq~vrdlDfNpnk---q~~ 229 (370)
T KOG1007|consen 172 ----SFTSGAWSPHHDGN-QVATT--SDSTLQFWDLRTMKKNNSIEDA-H-----------GQRVRDLDFNPNK---QHI 229 (370)
T ss_pred ----eecccccCCCCccc-eEEEe--CCCcEEEEEccchhhhcchhhh-h-----------cceeeeccCCCCc---eEE
Confidence 00000111 2333 34443 3579999999998876555421 0 1111111233332 235
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCc-eEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
+++|+.||.|+|||.|+.+.|+..+..|...|.++.|.+..+. ++++|.|..+.+|-...-+....
T Consensus 230 lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~q------------- 296 (370)
T KOG1007|consen 230 LVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQ------------- 296 (370)
T ss_pred EEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccc-------------
Confidence 8899999999999999999999999999999999999887775 47899999999996543221111
Q ss_pred EEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeC
Q 016769 312 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWEL 378 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~ 378 (383)
+.|.-|..-.--.....+++ -+ ....+.++..|+..|.+++||.-.+ ++|+-|.||.+.|=++
T Consensus 297 -i~~~~dese~e~~dseer~k--pL-~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V 360 (370)
T KOG1007|consen 297 -IEFEDDESESEDEDSEERVK--PL-QDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSV 360 (370)
T ss_pred -cccccccccCcchhhHHhcc--cc-cccccccccccccceEEEeeccCCCeeEEEeccCceEEeecC
Confidence 11111100000000111122 11 1234567888999999999998777 7899999999988665
No 156
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.67 E-value=1.4e-12 Score=121.98 Aligned_cols=292 Identities=26% Similarity=0.462 Sum_probs=189.4
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc-cccccccccccceeeeeee-cCCCCcc-eeEecc-cCCeE
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR-TVSSSWVHSAAHGIVSVAT-GPSIGLN-KVISQG-RDGTV 88 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~-~l~s~~-~D~ti 88 (383)
.+.+|...|.++.|.+.+..++.++.|+.+.+|+..... ....+..... ..+..+.. .+ ++. .++..+ .|+++
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~d~~~ 136 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHD-SSVSKLALSSP--DGNSILLASSSLDGTV 136 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCC-CceeeEEEECC--CcceEEeccCCCCccE
Confidence 577999999999999999999999999999999987765 3333322111 12333333 33 233 455544 49999
Q ss_pred EEeecCC-CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 89 KCWDIEN-GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 89 ~~Wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
++|++.. ... ...+..+.... . ...+.+
T Consensus 137 ~~~~~~~~~~~----~~~~~~~~~~v----------------------------------------------~-~~~~~~ 165 (466)
T COG2319 137 KLWDLSTPGKL----IRTLEGHSESV----------------------------------------------T-SLAFSP 165 (466)
T ss_pred EEEEecCCCeE----EEEEecCcccE----------------------------------------------E-EEEECC
Confidence 9999875 210 00000000000 0 011223
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
.+. +++..+..++.+++|++.....+..+..+ .....+. .+.+.. ...+++++.|+.|++||.
T Consensus 166 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~v~~~---~~~~~~---~~~~~~~~~d~~i~~wd~ 228 (466)
T COG2319 166 DGK-LLASGSSLDGTIKLWDLRTGKPLSTLAGH----------TDPVSSL---AFSPDG---GLLIASGSSDGTIRLWDL 228 (466)
T ss_pred CCC-EEEecCCCCCceEEEEcCCCceEEeeccC----------CCceEEE---EEcCCc---ceEEEEecCCCcEEEEEC
Confidence 332 33333224889999999886655555421 1122222 233322 113444599999999998
Q ss_pred CCCCCcee-eeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe
Q 016769 248 RNPGIPLT-AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG 326 (383)
Q Consensus 248 ~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~ 326 (383)
.. ..... .+..|...+ ...|.+.+..+++++.|+.+++|++..... .... ...+...+.++.|+|++..+++++
T Consensus 229 ~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~--~~~~~~~v~~~~~~~~~~~~~~~~ 303 (466)
T COG2319 229 ST-GKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS-LLRT--LSGHSSSVLSVAFSPDGKLLASGS 303 (466)
T ss_pred CC-CcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc-EEEE--EecCCccEEEEEECCCCCEEEEee
Confidence 74 33344 567777765 337877777778899999999999975543 1111 134467899999999888888899
Q ss_pred CCCcEEEEEcCCCceEEEec--ccccceeEEEEeCCCCEEEEE-eCCCcEEEEeCCC
Q 016769 327 WDRRVRIYNYRKGSALAILK--YHHATCNAVSFSSDCKLMASA-SEDSTVALWELYP 380 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~~--~h~~~v~~v~~spd~~~las~-s~d~~i~~w~~~~ 380 (383)
.|+.+++||........... .|...+..+.|.+++..++.+ ..|+.+.+|++..
T Consensus 304 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 360 (466)
T COG2319 304 SDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRT 360 (466)
T ss_pred CCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCC
Confidence 99999999998887776665 788889999994343555555 7889999999853
No 157
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.67 E-value=1.2e-15 Score=147.97 Aligned_cols=150 Identities=22% Similarity=0.321 Sum_probs=126.2
Q ss_pred eEEEEEe--CCCcEEEEeCCCC-----------CCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCC--C-
Q 016769 231 VNVLAGY--EDGSILVWDIRNP-----------GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS--T- 294 (383)
Q Consensus 231 ~~~~sg~--~dg~i~~wdl~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~--~- 294 (383)
..+++|+ .|+.+++|+...- ...+..+..|...|.|+.|++++.++++|+.|+.|.+|..... +
T Consensus 26 ~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~ 105 (942)
T KOG0973|consen 26 VKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGT 105 (942)
T ss_pred eeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcc
Confidence 3577888 8999999986321 1234556679999999999999999999999999999997720 0
Q ss_pred -----------CeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCE
Q 016769 295 -----------GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKL 363 (383)
Q Consensus 295 -----------~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~ 363 (383)
........+..|...|..++++|++.++|+++.|++|.|||..+.+.++++++|+..|..+.|-|-|++
T Consensus 106 ~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky 185 (942)
T KOG0973|consen 106 VFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKY 185 (942)
T ss_pred cccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCe
Confidence 001122345668889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEeCCC
Q 016769 364 MASASEDSTVALWELYP 380 (383)
Q Consensus 364 las~s~d~~i~~w~~~~ 380 (383)
|||-+.|++|++|+..+
T Consensus 186 ~ASqsdDrtikvwrt~d 202 (942)
T KOG0973|consen 186 FASQSDDRTLKVWRTSD 202 (942)
T ss_pred eeeecCCceEEEEEccc
Confidence 99999999999999754
No 158
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.66 E-value=4.1e-14 Score=133.88 Aligned_cols=145 Identities=15% Similarity=0.212 Sum_probs=102.3
Q ss_pred EEEEEeCCCcEEEE---eCCCCC----CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee
Q 016769 232 NVLAGYEDGSILVW---DIRNPG----IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN 304 (383)
Q Consensus 232 ~~~sg~~dg~i~~w---dl~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~ 304 (383)
+++.|+++|.|.-= +.+... .++.....|.++|.++.+.|-+.-++..+.|-+++||.-...+.... ...
T Consensus 362 ~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~---~~~ 438 (555)
T KOG1587|consen 362 HFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLL---SLD 438 (555)
T ss_pred eEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcch---hhh
Confidence 46778888877652 222211 12334556889999999988877655544599999998653332211 112
Q ss_pred cCCCCeEEEEECCCCc-EEEEEeCCCcEEEEEcCC--CceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 305 LERPGISGTSIRPDSK-IAATAGWDRRVRIYNYRK--GSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 305 ~~~~~i~~~~~~p~~~-~l~s~~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.....+.++++||... .|+++..||+|.+||+.. ..+.....-+......+.|+++|+.|+.|...|.+++|++.
T Consensus 439 ~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 439 SSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLS 516 (555)
T ss_pred hccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcC
Confidence 2334589999999864 688888899999999954 34454554455566778889999999999999999999995
No 159
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.66 E-value=3.6e-13 Score=123.36 Aligned_cols=199 Identities=8% Similarity=0.129 Sum_probs=117.2
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCee-eEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERC-TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 245 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w 245 (383)
+++ +++.++...++.+.+||+++...+ ..... .. .. . ....+ .+.|+ +...+++...++.|.+|
T Consensus 89 ~~g-~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~-~~----~~-~--~~~~~---~~~p~---g~~l~v~~~~~~~v~v~ 153 (330)
T PRK11028 89 HQG-RFLFSASYNANCVSVSPLDKDGIPVAPIQI-IE----GL-E--GCHSA---NIDPD---NRTLWVPCLKEDRIRLF 153 (330)
T ss_pred CCC-CEEEEEEcCCCeEEEEEECCCCCCCCceee-cc----CC-C--cccEe---EeCCC---CCEEEEeeCCCCEEEEE
Confidence 444 355566556789999999643211 11110 00 00 0 00111 13332 22334667788999999
Q ss_pred eCCCCCCcee----eeec-cccCeEEEEEeCCCCceEEEEc-CCcEEEEEccCCCCeeEEeeeeecC------CCCeEEE
Q 016769 246 DIRNPGIPLT----AMKV-HLEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINLE------RPGISGT 313 (383)
Q Consensus 246 dl~~~~~~~~----~~~~-h~~~v~~~~~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~~~~~~~~------~~~i~~~ 313 (383)
|+++.+.... .... .......+.|++++..+++.+. ++.|.+|+++..++........... ......+
T Consensus 154 d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i 233 (330)
T PRK11028 154 TLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADI 233 (330)
T ss_pred EECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeE
Confidence 9976332110 0111 1223467899999998877665 8999999998543322221111110 1123358
Q ss_pred EECCCCcEEEEEe-CCCcEEEEEcCCCceEEEecccc---cceeEEEEeCCCCEEEEEeC-CCcEEEEeCCC
Q 016769 314 SIRPDSKIAATAG-WDRRVRIYNYRKGSALAILKYHH---ATCNAVSFSSDCKLMASASE-DSTVALWELYP 380 (383)
Q Consensus 314 ~~~p~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~h~---~~v~~v~~spd~~~las~s~-d~~i~~w~~~~ 380 (383)
.|+|++++++++. .++.|.+|+++.......+.+|. .....++|+|||++|+++.. +++|.+|++.+
T Consensus 234 ~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~ 305 (330)
T PRK11028 234 HITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG 305 (330)
T ss_pred EECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence 8999999988875 47899999996543211222221 24567899999998887765 89999998854
No 160
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.65 E-value=1.9e-14 Score=123.01 Aligned_cols=279 Identities=18% Similarity=0.254 Sum_probs=163.2
Q ss_pred CeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCc
Q 016769 31 PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS 110 (383)
Q Consensus 31 ~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~ 110 (383)
..+|++-..|.|+++|..+++.+.....+......+. |........+.+++.||+||+||+........ +
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vr--f~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~----~---- 110 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVR--FISCDSPHGVISCSSDGTVRLWDIRSQAESAR----I---- 110 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceE--EecCCCCCeeEEeccCCeEEEEEeecchhhhh----e----
Confidence 5689999999999999998887777666544322222 22211246789999999999999975431110 0
Q ss_pred eeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC-CCceeeecc---CCcceEEEE
Q 016769 111 YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE-GPKYMAVAG---EQLSEVEIW 186 (383)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g---~~~~~i~~W 186 (383)
...+.+. .+ +..+... ..+++++.. ..+..+.+|
T Consensus 111 ------~~~~~~~-------~~-----------------------------f~~ld~nck~~ii~~GtE~~~s~A~v~lw 148 (376)
T KOG1188|consen 111 ------SWTQQSG-------TP-----------------------------FICLDLNCKKNIIACGTELTRSDASVVLW 148 (376)
T ss_pred ------eccCCCC-------Cc-----------------------------ceEeeccCcCCeEEeccccccCceEEEEE
Confidence 0000000 00 0000000 001122111 234579999
Q ss_pred ecCCCCe-eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC--ceeeeeccccC
Q 016769 187 DLNTAER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI--PLTAMKVHLEP 263 (383)
Q Consensus 187 dl~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~--~~~~~~~h~~~ 263 (383)
|.+..++ +..+.. .+..+ + ....|.|.+.+ .|++|+.||.|.|||++.+.. .+...-.|...
T Consensus 149 DvR~~qq~l~~~~e-------SH~DD--V---T~lrFHP~~pn---lLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sS 213 (376)
T KOG1188|consen 149 DVRSEQQLLRQLNE-------SHNDD--V---TQLRFHPSDPN---LLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSS 213 (376)
T ss_pred Eeccccchhhhhhh-------hccCc--c---eeEEecCCCCC---eEEeecccceEEeeecCCCcchhhHHHhhcccce
Confidence 9998776 333321 12111 1 11237776543 589999999999999986532 12222245667
Q ss_pred eEEEEEeC-CCCceEEEEcCCcEEEEEccCCCCeeEEeee-eec--------CCCCeEEEEECC-CCcEEEEEeC-CCcE
Q 016769 264 VLCLSIDE-SCNGGISGGADQKIVLYNLDHSTGSCVIKKE-INL--------ERPGISGTSIRP-DSKIAATAGW-DRRV 331 (383)
Q Consensus 264 v~~~~~~~-~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~-~~~--------~~~~i~~~~~~p-~~~~l~s~~~-dg~i 331 (383)
|.++.|.. .++.++.-+...+..+|+++.......+... ... ...-|.+ .+| +..+++.++. -++.
T Consensus 214 I~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~--~~~~~~~~~~l~g~~~n~~ 291 (376)
T KOG1188|consen 214 IHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINE--HSPGDKDTCALAGTDSNKG 291 (376)
T ss_pred eeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeec--ccCCCcceEEEeccccCce
Confidence 88999954 4456778889999999999876532222111 000 0000111 223 3345555554 6667
Q ss_pred EEEEcCC------CceEEEecc-cccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 332 RIYNYRK------GSALAILKY-HHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 332 ~iwd~~~------~~~~~~~~~-h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.++-+.. .+.+..+++ |..-|.++.|...+.++.||++||.+.+|..
T Consensus 292 ~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~ 345 (376)
T KOG1188|consen 292 TIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKV 345 (376)
T ss_pred eEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEec
Confidence 7765532 334455666 6666778888777789999999999999986
No 161
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=4.8e-15 Score=135.08 Aligned_cols=134 Identities=18% Similarity=0.282 Sum_probs=106.0
Q ss_pred eCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEEC
Q 016769 237 YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 316 (383)
Q Consensus 237 ~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~ 316 (383)
+....|.|.++.... .+..+..-.+-|.++.|+|...+++.+ ....|++|||..+ .+.+.+......|..++++
T Consensus 543 ~~~~~VliHQLSK~~-sQ~PF~kskG~vq~v~FHPs~p~lfVa-Tq~~vRiYdL~kq----elvKkL~tg~kwiS~msih 616 (733)
T KOG0650|consen 543 SGNKSVLIHQLSKRK-SQSPFRKSKGLVQRVKFHPSKPYLFVA-TQRSVRIYDLSKQ----ELVKKLLTGSKWISSMSIH 616 (733)
T ss_pred CCcceEEEEeccccc-ccCchhhcCCceeEEEecCCCceEEEE-eccceEEEehhHH----HHHHHHhcCCeeeeeeeec
Confidence 456789999997632 233343344578899999998877665 4667999998642 2233333444568999999
Q ss_pred CCCcEEEEEeCCCcEEEEEcCCC-ceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 317 PDSKIAATAGWDRRVRIYNYRKG-SALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 317 p~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
|.|.-|+.|+.|+++.+||++-+ +++++++.|.+.+.+|+||+.=.++|+|+.||++.||
T Consensus 617 p~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vf 677 (733)
T KOG0650|consen 617 PNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVF 677 (733)
T ss_pred CCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEE
Confidence 99999999999999999999754 6788999999999999999988899999999999998
No 162
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.64 E-value=2.5e-15 Score=141.63 Aligned_cols=282 Identities=17% Similarity=0.259 Sum_probs=176.1
Q ss_pred eeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEe
Q 016769 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~W 91 (383)
..|.||...|+|+.|...|.+++||+.|..|+||...+++|+..+.+|.. .+.-++.+- +...++++|.|..||+|
T Consensus 184 krLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~--ditdlavs~--~n~~iaaaS~D~vIrvW 259 (1113)
T KOG0644|consen 184 KRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSG--DITDLAVSS--NNTMIAAASNDKVIRVW 259 (1113)
T ss_pred HHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCcc--ccchhccch--hhhhhhhcccCceEEEE
Confidence 35789999999999999999999999999999999999999998877753 344444332 23456789999999999
Q ss_pred ecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCc
Q 016769 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPK 171 (383)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (383)
.+.++.... .++.+. |.. . ..++++.
T Consensus 260 rl~~~~pvs----vLrght------------------------------gav----------------t-aiafsP~--- 285 (1113)
T KOG0644|consen 260 RLPDGAPVS----VLRGHT------------------------------GAV----------------T-AIAFSPR--- 285 (1113)
T ss_pred ecCCCchHH----HHhccc------------------------------cce----------------e-eeccCcc---
Confidence 998774211 111000 000 0 0111111
Q ss_pred eeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
. +.+.|+++++||-+- ..+.. .+..+.+..+ ...+.. .| .+ + .....+++.|+.-..|.+...
T Consensus 286 --~-sss~dgt~~~wd~r~-~~~~y-----~prp~~~~~~-~~~~s~--~~--~~-~-~~~f~Tgs~d~ea~n~e~~~l- 348 (1113)
T KOG0644|consen 286 --A-SSSDDGTCRIWDARL-EPRIY-----VPRPLKFTEK-DLVDSI--LF--EN-N-GDRFLTGSRDGEARNHEFEQL- 348 (1113)
T ss_pred --c-cCCCCCceEeccccc-ccccc-----CCCCCCcccc-cceeee--ec--cc-c-ccccccccCCcccccchhhHh-
Confidence 1 446689999999871 11111 1111222222 112211 11 11 1 124678999998888875431
Q ss_pred CceeeeeccccCeEEEEEeCCC-CceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC-cEEEEEeCCC
Q 016769 252 IPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KIAATAGWDR 329 (383)
Q Consensus 252 ~~~~~~~~h~~~v~~~~~~~~~-~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-~~l~s~~~dg 329 (383)
..+...+..+....+. ...+++-.+..+++|++-..... .....+...+..+.++|-+ +...+++.||
T Consensus 349 ------~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~----H~l~ghsd~~yvLd~Hpfn~ri~msag~dg 418 (1113)
T KOG0644|consen 349 ------AWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLL----HNLMGHSDEVYVLDVHPFNPRIAMSAGYDG 418 (1113)
T ss_pred ------hhhccceEEEeccccccccceeeeeeeEeeeeecccchhh----hhhcccccceeeeeecCCCcHhhhhccCCC
Confidence 1111111122222111 12355566777889987644311 1233455678889999854 5677899999
Q ss_pred cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 330 RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+..|||+..|.+++.+.--...+..-+||+||..++..-.-|.+.|...
T Consensus 419 st~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~ 467 (1113)
T KOG0644|consen 419 STIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGT 467 (1113)
T ss_pred ceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEecc
Confidence 9999999988877655432445666799999999888888888887754
No 163
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64 E-value=2.7e-15 Score=135.97 Aligned_cols=220 Identities=20% Similarity=0.276 Sum_probs=131.0
Q ss_pred CCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccc------cccc----ccccccccceeeeeeecCCCCcc
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH------RTVS----SSWVHSAAHGIVSVATGPSIGLN 77 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~------~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 77 (383)
-+|+.+|++|.++|.|+++.+++..++|||-||+|+.|++... .... .+.+|. ..+..++++.. ..
T Consensus 334 ~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ght--davw~l~~s~~--~~ 409 (577)
T KOG0642|consen 334 VEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHT--DAVWLLALSST--KD 409 (577)
T ss_pred eeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccc--cceeeeeeccc--cc
Confidence 4588999999999999999999999999999999999976422 1111 222333 23556666653 35
Q ss_pred eeEecccCCeEEEeecCCCCCCCCCeeeeecC-ceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccC
Q 016769 78 KVISQGRDGTVKCWDIENGGLSSNPSLTIKTN-SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESN 156 (383)
Q Consensus 78 ~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (383)
+|++++.|||+|.|+...... .++..... .++. .+......
T Consensus 410 ~Llscs~DgTvr~w~~~~~~~---~~f~~~~e~g~Pl-svd~~ss~---------------------------------- 451 (577)
T KOG0642|consen 410 RLLSCSSDGTVRLWEPTEESP---CTFGEPKEHGYPL-SVDRTSSR---------------------------------- 451 (577)
T ss_pred ceeeecCCceEEeeccCCcCc---cccCCccccCCcc-eEeeccch----------------------------------
Confidence 799999999999999854321 00110000 0000 00000000
Q ss_pred CccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEE
Q 016769 157 RSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG 236 (383)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 236 (383)
..+.++....+..-+.+++..+....+....... ....+....+ ...| +...++++
T Consensus 452 --------------~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~--~~~~~~in~v----Vs~~----~~~~~~~~ 507 (577)
T KOG0642|consen 452 --------------PAHSLASFRFGYTSIDDMEVVSDLLIFESSASPG--PRRYPQINKV----VSHP----TADITFTA 507 (577)
T ss_pred --------------hHhhhhhcccccccchhhhhhhheeeccccCCCc--ccccCccceE----EecC----CCCeeEec
Confidence 0011111111122222233322222222111000 0000001111 1111 12357889
Q ss_pred eCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCC
Q 016769 237 YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 294 (383)
Q Consensus 237 ~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~ 294 (383)
.+|+.|+++|-.+ +.++..+..|...+.++++++.+.++++++.|+++++|.++..+
T Consensus 508 hed~~Ir~~dn~~-~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~ 564 (577)
T KOG0642|consen 508 HEDRSIRFFDNKT-GKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKT 564 (577)
T ss_pred ccCCceecccccc-cccchheeeccceecceeecCCCceEEeecCCceeehhhccchh
Confidence 9999999999877 45677788899999999999999999999999999999987654
No 164
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.62 E-value=3.2e-14 Score=124.93 Aligned_cols=72 Identities=28% Similarity=0.367 Sum_probs=65.0
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe-cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
..|+++++++||+++|.|+.||.|.|++..+.+.+... +.|...|..+.|+||.+++++.|.|..+.+..+.
T Consensus 282 ~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 282 KSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA 354 (398)
T ss_pred CcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence 46999999999999999999999999999988877644 5799999999999999999999999999888764
No 165
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.61 E-value=1.2e-13 Score=117.56 Aligned_cols=298 Identities=17% Similarity=0.256 Sum_probs=179.6
Q ss_pred eeeecCCceeeEEEeC----CCCeEEEecCCCeEEEeeCcccc--c-ccccccccccceee--eeeecCCCCcceeEecc
Q 016769 13 VLRGHRASVTDVCFHQ----TKPILFAGTTGGELRIWDTVQHR--T-VSSSWVHSAAHGIV--SVATGPSIGLNKVISQG 83 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~----~~~~L~sgs~D~~v~vW~~~~~~--~-~~~~~~~~~~~~~~--~~~~~~~~~~~~l~s~~ 83 (383)
..++|+.+|..++|++ +...+++.....++.+++..... + ++........+... +++..-..+.-.++.+|
T Consensus 33 l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G 112 (385)
T KOG1034|consen 33 LKEDHNKPIFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGG 112 (385)
T ss_pred hhccCCCccceeeeehhcCCCCCceEEEeCCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeec
Confidence 4679999999999984 33344444555578888875543 2 22221111112222 23332211234577888
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.-|.||+.|+.++++... +.. |+. . ..+ .
T Consensus 113 ~~GvIrVid~~~~~~~~~----~~g---hG~-----------------s-------INe--------------------i 141 (385)
T KOG1034|consen 113 YLGVIRVIDVVSGQCSKN----YRG---HGG-----------------S-------INE--------------------I 141 (385)
T ss_pred ceeEEEEEecchhhhccc----eec---cCc-----------------c-------chh--------------------h
Confidence 999999999987653210 000 000 0 000 0
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
...+..++ ++++++.|.+||+|+++++.++..+..-. .+.+.+ +++ .|.++. .++++|+-|.+|+
T Consensus 142 k~~p~~~q-lvls~SkD~svRlwnI~~~~Cv~VfGG~e-------gHrdeV--LSv-D~~~~g----d~i~ScGmDhslk 206 (385)
T KOG1034|consen 142 KFHPDRPQ-LVLSASKDHSVRLWNIQTDVCVAVFGGVE-------GHRDEV--LSV-DFSLDG----DRIASCGMDHSLK 206 (385)
T ss_pred hcCCCCCc-EEEEecCCceEEEEeccCCeEEEEecccc-------cccCcE--EEE-EEcCCC----CeeeccCCcceEE
Confidence 11233333 45567778999999999999988776411 112222 222 244332 2689999999999
Q ss_pred EEeCCCCC-------------------Cc--------eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCC---
Q 016769 244 VWDIRNPG-------------------IP--------LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS--- 293 (383)
Q Consensus 244 ~wdl~~~~-------------------~~--------~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~--- 293 (383)
+|+|..+. .| ..+-..|..+|-|+.|-. +.+++-+.++.|..|--...
T Consensus 207 ~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~g--d~ilSkscenaI~~w~pgkl~e~ 284 (385)
T KOG1034|consen 207 LWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFG--DFILSKSCENAIVCWKPGKLEES 284 (385)
T ss_pred EEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHh--hheeecccCceEEEEecchhhhh
Confidence 99996321 00 012234666777776643 45688888999999975211
Q ss_pred -------CCeeEEeeeeecCCCCeEE--EEECCCCcEEEEEeCCCcEEEEEcCCCceE--EEecc--cccceeEEEEeCC
Q 016769 294 -------TGSCVIKKEINLERPGISG--TSIRPDSKIAATAGWDRRVRIYNYRKGSAL--AILKY--HHATCNAVSFSSD 360 (383)
Q Consensus 294 -------~~~~~~~~~~~~~~~~i~~--~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~--h~~~v~~v~~spd 360 (383)
........+++...-.+.- ++|.|-.+.||.|...|+|++||++...+. .++.. -.+.|...+||-|
T Consensus 285 ~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~d 364 (385)
T KOG1034|consen 285 IHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRD 364 (385)
T ss_pred hhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeeccc
Confidence 1111111223333333443 456677889999999999999999876553 23322 2346888899999
Q ss_pred CCEEEEEeCCCcEEEEeC
Q 016769 361 CKLMASASEDSTVALWEL 378 (383)
Q Consensus 361 ~~~las~s~d~~i~~w~~ 378 (383)
|..|+...+|++|--||.
T Consensus 365 gs~lv~vcdd~~Vwrwdr 382 (385)
T KOG1034|consen 365 GSILVLVCDDGTVWRWDR 382 (385)
T ss_pred CcEEEEEeCCCcEEEEEe
Confidence 999999999999988875
No 166
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.61 E-value=5.3e-14 Score=122.45 Aligned_cols=214 Identities=17% Similarity=0.286 Sum_probs=129.6
Q ss_pred CCCCeeeeeecCCceeeEEEeCC-CCeEEEecCCCeEEEeeCccccccc-------ccccccccceeeeeeecCCCCcce
Q 016769 7 PPDPVAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVS-------SSWVHSAAHGIVSVATGPSIGLNK 78 (383)
Q Consensus 7 ~~~~~~~l~gH~~~V~~v~f~~~-~~~L~sgs~D~~v~vW~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 78 (383)
.+.....+.||+++|..++|.|- ...|||||+|.+|.||+........ .+.+|. ..+-.+.+.|. ..+.
T Consensus 70 ~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~--rrVg~V~wHPt-A~NV 146 (472)
T KOG0303|consen 70 MDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQ--RRVGLVQWHPT-APNV 146 (472)
T ss_pred cCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecc--eeEEEEeeccc-chhh
Confidence 34445578999999999999994 4689999999999999987654332 233333 34555677775 3578
Q ss_pred eEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCc
Q 016769 79 VISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRS 158 (383)
Q Consensus 79 l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (383)
|+|+|.|++|.+||+++|+.. .++. .+..++
T Consensus 147 Llsag~Dn~v~iWnv~tgeal----i~l~-----------------------hpd~i~---------------------- 177 (472)
T KOG0303|consen 147 LLSAGSDNTVSIWNVGTGEAL----ITLD-----------------------HPDMVY---------------------- 177 (472)
T ss_pred HhhccCCceEEEEeccCCcee----eecC-----------------------CCCeEE----------------------
Confidence 999999999999999998631 1110 011111
Q ss_pred cceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEE---E
Q 016769 159 FEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL---A 235 (383)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s 235 (383)
..++..+|. ++++...|.+||+||.++++.+..-..+. ++ +-.... |..+ +. .+. +
T Consensus 178 ---S~sfn~dGs--~l~TtckDKkvRv~dpr~~~~v~e~~~he-----G~----k~~Rai---fl~~---g~-i~tTGfs 236 (472)
T KOG0303|consen 178 ---SMSFNRDGS--LLCTTCKDKKVRVIDPRRGTVVSEGVAHE-----GA----KPARAI---FLAS---GK-IFTTGFS 236 (472)
T ss_pred ---EEEeccCCc--eeeeecccceeEEEcCCCCcEeeeccccc-----CC----CcceeE---Eecc---Cc-eeeeccc
Confidence 112233443 34556778999999999998765442110 00 011111 1111 10 122 2
Q ss_pred EeCCCcEEEEeCCCCCCceeeeeccccCeEEEEE-eCCCCceEEEE-cCCcEEEEEccCC
Q 016769 236 GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSI-DESCNGGISGG-ADQKIVLYNLDHS 293 (383)
Q Consensus 236 g~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~~s~~-~d~~i~~wdl~~~ 293 (383)
...+.++-+||-.+-..++..-..-+..-.-+.| |++...++.+| .|+.|+.|.+...
T Consensus 237 r~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d 296 (472)
T KOG0303|consen 237 RMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNE 296 (472)
T ss_pred cccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCC
Confidence 3457889999976544443322222222223333 77766665555 5899999988654
No 167
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.59 E-value=7.1e-12 Score=108.59 Aligned_cols=182 Identities=19% Similarity=0.291 Sum_probs=123.5
Q ss_pred eEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEE--EEeCCCcEEEEeCCCCCCceeeeec
Q 016769 182 EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL--AGYEDGSILVWDIRNPGIPLTAMKV 259 (383)
Q Consensus 182 ~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--sg~~dg~i~~wdl~~~~~~~~~~~~ 259 (383)
.|.|+|+++.+.+.++..- .++..++| ++.++..+. .++ .....|.|.+||..+ -.+...+..
T Consensus 107 ~IyIydI~~MklLhTI~t~--------~~n~~gl~----AlS~n~~n~--ylAyp~s~t~GdV~l~d~~n-l~~v~~I~a 171 (391)
T KOG2110|consen 107 SIYIYDIKDMKLLHTIETT--------PPNPKGLC----ALSPNNANC--YLAYPGSTTSGDVVLFDTIN-LQPVNTINA 171 (391)
T ss_pred cEEEEecccceeehhhhcc--------CCCccceE----eeccCCCCc--eEEecCCCCCceEEEEEccc-ceeeeEEEe
Confidence 4999999999988776521 12334444 344443322 122 234578999999876 456778889
Q ss_pred cccCeEEEEEeCCCCceEEEEcCCc-EEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC
Q 016769 260 HLEPVLCLSIDESCNGGISGGADQK-IVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 260 h~~~v~~~~~~~~~~~~~s~~~d~~-i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~ 338 (383)
|..++.+++|+++|..+++++..|+ ||++.+...+....++.-.. .-.|.+++|+|++++|++.|..++|++|.+++
T Consensus 172 H~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~--~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 172 HKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY--PVSIYSLSFSPDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred cCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCce--eeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence 9999999999999999999999998 58998865543222221111 23588999999999999999999999998854
Q ss_pred Cc---------------------------eE----------EEecccccc-eeEEEEe--CCCCEEEEEeCCCcEEEEeC
Q 016769 339 GS---------------------------AL----------AILKYHHAT-CNAVSFS--SDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 339 ~~---------------------------~~----------~~~~~h~~~-v~~v~~s--pd~~~las~s~d~~i~~w~~ 378 (383)
-. ++ .+.+.-... -...++. +..+.+-.++.||....|.+
T Consensus 250 ~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l 329 (391)
T KOG2110|consen 250 VSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQKIPRVLVASYDGHLYSYRL 329 (391)
T ss_pred cccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccCCCCEEEEEEcCCeEEEEEc
Confidence 10 00 000000001 0223454 35678888999999999999
Q ss_pred CC
Q 016769 379 YP 380 (383)
Q Consensus 379 ~~ 380 (383)
.+
T Consensus 330 ~~ 331 (391)
T KOG2110|consen 330 PP 331 (391)
T ss_pred CC
Confidence 54
No 168
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.58 E-value=1.1e-13 Score=122.70 Aligned_cols=245 Identities=18% Similarity=0.236 Sum_probs=158.1
Q ss_pred ccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceecc
Q 016769 61 AAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV 140 (383)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (383)
...++.++.|.|. -..|+++|.|++++++.+.... ++.+ .+. .+.+.|..
T Consensus 212 s~~~I~sv~FHp~--~plllvaG~d~~lrifqvDGk~---N~~l----qS~-----~l~~fPi~---------------- 261 (514)
T KOG2055|consen 212 SHGGITSVQFHPT--APLLLVAGLDGTLRIFQVDGKV---NPKL----QSI-----HLEKFPIQ---------------- 261 (514)
T ss_pred CcCCceEEEecCC--CceEEEecCCCcEEEEEecCcc---Chhh----eee-----eeccCccc----------------
Confidence 3457899999995 4678899999999999996432 1110 011 11111100
Q ss_pred CcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEE
Q 016769 141 GETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQ 220 (383)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 220 (383)
-..+.+.|...++++ +.......|||++.+. .++.... ....+.+.
T Consensus 262 ---------------------~a~f~p~G~~~i~~s-~rrky~ysyDle~ak~-~k~~~~~-------g~e~~~~e---- 307 (514)
T KOG2055|consen 262 ---------------------KAEFAPNGHSVIFTS-GRRKYLYSYDLETAKV-TKLKPPY-------GVEEKSME---- 307 (514)
T ss_pred ---------------------eeeecCCCceEEEec-ccceEEEEeecccccc-ccccCCC-------Ccccchhh----
Confidence 011234454445554 4457899999988773 2232211 00111111
Q ss_pred eecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEe
Q 016769 221 AYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIK 300 (383)
Q Consensus 221 ~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~ 300 (383)
-|-.+ .....++..+..|.|.+--..+ ...+..++. .+.|..+.|+.++..+++++.+|.|.+||++...+...+.
T Consensus 308 ~FeVS--hd~~fia~~G~~G~I~lLhakT-~eli~s~Ki-eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~ 383 (514)
T KOG2055|consen 308 RFEVS--HDSNFIAIAGNNGHIHLLHAKT-KELITSFKI-EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFV 383 (514)
T ss_pred eeEec--CCCCeEEEcccCceEEeehhhh-hhhhheeee-ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEe
Confidence 11111 1112577788899999988765 344555553 4578889999888889999999999999998664333222
Q ss_pred eeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC------CceEEEecccccceeEEEEeCCCCEEEEEeC--CCc
Q 016769 301 KEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK------GSALAILKYHHATCNAVSFSSDCKLMASASE--DST 372 (383)
Q Consensus 301 ~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~------~~~~~~~~~h~~~v~~v~~spd~~~las~s~--d~~ 372 (383)
- -..-.-++++.++++.|||+|+..|-|.|||..+ +++++++..-.-.|.+++|+||.++||-+|. ...
T Consensus 384 D---~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~kna 460 (514)
T KOG2055|consen 384 D---DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNA 460 (514)
T ss_pred e---cCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccc
Confidence 1 1111235677889999999999999999999754 5777788777889999999999999887765 344
Q ss_pred EEEE
Q 016769 373 VALW 376 (383)
Q Consensus 373 i~~w 376 (383)
+|+-
T Consensus 461 lrLV 464 (514)
T KOG2055|consen 461 LRLV 464 (514)
T ss_pred eEEE
Confidence 5543
No 169
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.58 E-value=1.4e-13 Score=127.12 Aligned_cols=245 Identities=14% Similarity=0.205 Sum_probs=156.3
Q ss_pred CCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCC
Q 016769 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (383)
Q Consensus 7 ~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ 86 (383)
.-....+|+||++.|+||+|+.||+.+|||++|..|.+|+..-...+. ..|. ..+.++.|.|- ...|+|++. .
T Consensus 42 dG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~Lk--YSH~--D~IQCMsFNP~--~h~LasCsL-s 114 (1081)
T KOG1538|consen 42 DGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILK--YSHN--DAIQCMSFNPI--THQLASCSL-S 114 (1081)
T ss_pred CcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceee--eccC--CeeeEeecCch--HHHhhhcch-h
Confidence 334667899999999999999999999999999999999965332221 1233 45788888884 356777764 2
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
-+-+|..+...... ... +
T Consensus 115 dFglWS~~qK~V~K---------------------~ks-------------------------------------s---- 132 (1081)
T KOG1538|consen 115 DFGLWSPEQKSVSK---------------------HKS-------------------------------------S---- 132 (1081)
T ss_pred hccccChhhhhHHh---------------------hhh-------------------------------------h----
Confidence 35667643221000 000 0
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
.+....+..+|| ..++.|..||+|.+-+
T Consensus 133 ---~R~~~CsWtnDG-------------------------------------------------qylalG~~nGTIsiRN 160 (1081)
T KOG1538|consen 133 ---SRIICCSWTNDG-------------------------------------------------QYLALGMFNGTISIRN 160 (1081)
T ss_pred ---eeEEEeeecCCC-------------------------------------------------cEEEEeccCceEEeec
Confidence 000111111111 1244455566666554
Q ss_pred CCC-CCCceeeeeccccCeEEEEEeCCCC-----ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCc
Q 016769 247 IRN-PGIPLTAMKVHLEPVLCLSIDESCN-----GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK 320 (383)
Q Consensus 247 l~~-~~~~~~~~~~h~~~v~~~~~~~~~~-----~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~ 320 (383)
-.. +...+..--+.++||.++.++|... .++.....+++.++.++. ...- +. +.-.....++.+-|+|.
T Consensus 161 k~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG---~~Ig-k~-r~L~FdP~CisYf~NGE 235 (1081)
T KOG1538|consen 161 KNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSG---KQIG-KD-RALNFDPCCISYFTNGE 235 (1081)
T ss_pred CCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecc---eeec-cc-ccCCCCchhheeccCCc
Confidence 211 1111122223567888888866432 234555566666666542 1111 01 11123467888999999
Q ss_pred EEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 321 IAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 321 ~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
|+..|+.|+-+++|-. .|-.+.++.....+|++|+..|++++++.|..||+|-.||+
T Consensus 236 y~LiGGsdk~L~~fTR-~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl 292 (1081)
T KOG1538|consen 236 YILLGGSDKQLSLFTR-DGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNL 292 (1081)
T ss_pred EEEEccCCCceEEEee-cCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhh
Confidence 9999999999998865 57778888777889999999999999999999999999987
No 170
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.58 E-value=9.6e-14 Score=118.23 Aligned_cols=83 Identities=19% Similarity=0.382 Sum_probs=69.4
Q ss_pred eeeeecCCceeeEEEeCCC-CeEEEecCCCeEEEeeCcccccccccccc-cccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 12 AVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTVSSSWVH-SAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~~-~~L~sgs~D~~v~vW~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
..++||-.+|+.|.|+|+. ++|+|+|.|..||+|+..+..|+..+.+- .+..-+.++.++. ++.+++|+|.|.+++
T Consensus 129 ~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~--~gd~i~ScGmDhslk 206 (385)
T KOG1034|consen 129 KNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSL--DGDRIASCGMDHSLK 206 (385)
T ss_pred cceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcC--CCCeeeccCCcceEE
Confidence 4578999999999999986 58999999999999999999888765432 2223578888887 467999999999999
Q ss_pred EeecCCC
Q 016769 90 CWDIENG 96 (383)
Q Consensus 90 ~Wd~~~~ 96 (383)
+|++...
T Consensus 207 ~W~l~~~ 213 (385)
T KOG1034|consen 207 LWRLNVK 213 (385)
T ss_pred EEecChh
Confidence 9999754
No 171
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.58 E-value=5.2e-13 Score=113.60 Aligned_cols=192 Identities=16% Similarity=0.240 Sum_probs=132.4
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
+.++.+.+.-|++||..+++..+.... +++....+......|.|+.. -+.++...+|++||+.-+++
T Consensus 125 l~a~ssr~~PIh~wdaftG~lraSy~~--------ydh~de~taAhsL~Fs~DGe-----qlfaGykrcirvFdt~RpGr 191 (406)
T KOG2919|consen 125 LFAVSSRDQPIHLWDAFTGKLRASYRA--------YDHQDEYTAAHSLQFSPDGE-----QLFAGYKRCIRVFDTSRPGR 191 (406)
T ss_pred eeeeccccCceeeeeccccccccchhh--------hhhHHhhhhheeEEecCCCC-----eEeecccceEEEeeccCCCC
Confidence 344567788999999999986555432 12222233333345766543 34566788999999944443
Q ss_pred cee---ee-e---ccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEE
Q 016769 253 PLT---AM-K---VHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 324 (383)
Q Consensus 253 ~~~---~~-~---~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s 324 (383)
... ++ + +-..-+.+++|+|... .++.++..+++-||.-+.+. .++ .+..+.++|+.+.|.++|+.|.+
T Consensus 192 ~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~--pl~--llggh~gGvThL~~~edGn~lfs 267 (406)
T KOG2919|consen 192 DCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRR--PLQ--LLGGHGGGVTHLQWCEDGNKLFS 267 (406)
T ss_pred CCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCC--cee--eecccCCCeeeEEeccCcCeecc
Confidence 211 11 1 1134578889988765 57888999999888655432 222 23467789999999999999988
Q ss_pred EeC-CCcEEEEEcCC-CceEEEeccccc-ceeEEEE--eCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 325 AGW-DRRVRIYNYRK-GSALAILKYHHA-TCNAVSF--SSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 325 ~~~-dg~i~iwd~~~-~~~~~~~~~h~~-~v~~v~~--spd~~~las~s~d~~i~~w~~~~~ 381 (383)
|.. |-+|-.||++. ..++..+..|.. .-..|-| -|++++||+|+.||.|++||+-++
T Consensus 268 GaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~ 329 (406)
T KOG2919|consen 268 GARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDL 329 (406)
T ss_pred cccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCC
Confidence 874 78999999975 455667777776 3334444 689999999999999999999653
No 172
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.58 E-value=1.1e-11 Score=116.03 Aligned_cols=289 Identities=27% Similarity=0.479 Sum_probs=188.9
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecC-CCeEEEeeCcccccccccccccccceeeeeeecCCCCcc-eeEecccCC
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTT-GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDG 86 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~-D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~D~ 86 (383)
.....+.+|...|++++|+|++..+++++. |+.+++|+....+.+..+..|. ..+.++.+.+. +. .+++++.|+
T Consensus 146 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~--~~~~~~~~~~d~ 221 (466)
T COG2319 146 KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHT--DPVSSLAFSPD--GGLLIASGSSDG 221 (466)
T ss_pred eEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCC--CceEEEEEcCC--cceEEEEecCCC
Confidence 455678999999999999999999999986 9999999998755555443333 35677777763 34 455669999
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
++++||...+..... . ...... .. +..+.
T Consensus 222 ~i~~wd~~~~~~~~~------~----------~~~~~~----------------------------------~~-~~~~~ 250 (466)
T COG2319 222 TIRLWDLSTGKLLRS------T----------LSGHSD----------------------------------SV-VSSFS 250 (466)
T ss_pred cEEEEECCCCcEEee------e----------cCCCCc----------------------------------ce-eEeEC
Confidence 999998764321000 0 000000 00 00122
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCe-eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 245 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w 245 (383)
+.+ .+++ +++.++.+++||+..... +..+.. +.....+. .+.|. . ..+++++.|+.+++|
T Consensus 251 ~~~-~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~----------~~~~v~~~---~~~~~---~-~~~~~~~~d~~~~~~ 311 (466)
T COG2319 251 PDG-SLLA-SGSSDGTIRLWDLRSSSSLLRTLSG----------HSSSVLSV---AFSPD---G-KLLASGSSDGTVRLW 311 (466)
T ss_pred CCC-CEEE-EecCCCcEEEeeecCCCcEEEEEec----------CCccEEEE---EECCC---C-CEEEEeeCCCcEEEE
Confidence 333 2333 567789999999987664 333311 11122222 34441 1 245568888999999
Q ss_pred eCCCCCCceeee--eccccCeEEEEEeCCC-CceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcE
Q 016769 246 DIRNPGIPLTAM--KVHLEPVLCLSIDESC-NGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 321 (383)
Q Consensus 246 dl~~~~~~~~~~--~~h~~~v~~~~~~~~~-~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 321 (383)
|++.... .... ..|...+..+.+ ... ..+..+ ..|+.+.+|++.... .. ...... ..+..+.+.+ ...
T Consensus 312 ~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~--~~--~~~~~~-~~~~~~~~~~-~~~ 383 (466)
T COG2319 312 DLETGKL-LSSLTLKGHEGPVSSLSF-SPDGSLLVSGGSDDGTIRLWDLRTGK--PL--KTLEGH-SNVLSVSFSP-DGR 383 (466)
T ss_pred EcCCCce-EEEeeecccCCceEEEEE-CCCCCEEEEeecCCCcEEeeecCCCc--ee--EEecCC-ceEEEEEECC-CCC
Confidence 9876543 2233 367667888888 432 344444 578889999987554 11 111111 1277888888 544
Q ss_pred EEE-EeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 322 AAT-AGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 322 l~s-~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+.. +..++.+.+|+............+...+....+++++..+++++.++.+++|+..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (466)
T COG2319 384 VVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLK 442 (466)
T ss_pred EEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEecc
Confidence 444 6899999999999888776665443778889999999999999999999999874
No 173
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.57 E-value=8.8e-13 Score=114.89 Aligned_cols=281 Identities=15% Similarity=0.208 Sum_probs=176.3
Q ss_pred cCCceeeEEEeCCCC--eEEEecCCCeEEEeeCccccccccc----ccccccceeeeeeecCCCCcceeEecccCCeEEE
Q 016769 17 HRASVTDVCFHQTKP--ILFAGTTGGELRIWDTVQHRTVSSS----WVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (383)
Q Consensus 17 H~~~V~~v~f~~~~~--~L~sgs~D~~v~vW~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~ 90 (383)
-...|.+++|.-+++ .|...+.|..+......+..+...+ ..+.....+..+... +..|++|-.+|.+++
T Consensus 54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~----dg~Litc~~sG~l~~ 129 (412)
T KOG3881|consen 54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA----DGTLITCVSSGNLQV 129 (412)
T ss_pred hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc----CCEEEEEecCCcEEE
Confidence 346777888876654 5666667878877776655544443 122222334444332 367899999999999
Q ss_pred eecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCC
Q 016769 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGP 170 (383)
Q Consensus 91 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (383)
|..+.+..-..+...+..+ .. ...+.. .++.
T Consensus 130 ~~~k~~d~hss~l~~la~g-----------~g------------------------------------~~~~r~--~~~~ 160 (412)
T KOG3881|consen 130 RHDKSGDLHSSKLIKLATG-----------PG------------------------------------LYDVRQ--TDTD 160 (412)
T ss_pred EeccCCccccccceeeecC-----------Cc------------------------------------eeeecc--CCCC
Confidence 9988653211111111000 00 000001 1122
Q ss_pred ceeeeccCCc--ceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 171 KYMAVAGEQL--SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 171 ~~~~~~g~~~--~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
+++++.|+-. +.+++||+++.+++.+.... ....+..- -.+.-+.+ .|.+... ...+++++.-+.+++||.+
T Consensus 161 p~Iva~GGke~~n~lkiwdle~~~qiw~aKNv-pnD~L~Lr--VPvW~tdi-~Fl~g~~--~~~fat~T~~hqvR~YDt~ 234 (412)
T KOG3881|consen 161 PYIVATGGKENINELKIWDLEQSKQIWSAKNV-PNDRLGLR--VPVWITDI-RFLEGSP--NYKFATITRYHQVRLYDTR 234 (412)
T ss_pred CceEecCchhcccceeeeecccceeeeeccCC-CCccccce--eeeeeccc-eecCCCC--CceEEEEecceeEEEecCc
Confidence 3455656555 78999999998776654421 11111100 00111111 1433211 2357889999999999999
Q ss_pred CCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC
Q 016769 249 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD 328 (383)
Q Consensus 249 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d 328 (383)
...+|+..+..-..++.++...++++.+++|..-+.+..+|++.. . +.....+...++++++..+|.++++|++|-|
T Consensus 235 ~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~--k-l~g~~~kg~tGsirsih~hp~~~~las~GLD 311 (412)
T KOG3881|consen 235 HQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGG--K-LLGCGLKGITGSIRSIHCHPTHPVLASCGLD 311 (412)
T ss_pred ccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCc--e-eeccccCCccCCcceEEEcCCCceEEeeccc
Confidence 888899888888889999999999999999999999999998743 1 1112234456789999999999999999999
Q ss_pred CcEEEEEcCCCceEEEecccccceeEEEEeCC
Q 016769 329 RRVRIYNYRKGSALAILKYHHATCNAVSFSSD 360 (383)
Q Consensus 329 g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd 360 (383)
+.+||+|+.+.+.+... +-...+++|-+.++
T Consensus 312 RyvRIhD~ktrkll~kv-YvKs~lt~il~~~~ 342 (412)
T KOG3881|consen 312 RYVRIHDIKTRKLLHKV-YVKSRLTFILLRDD 342 (412)
T ss_pred eeEEEeecccchhhhhh-hhhccccEEEecCC
Confidence 99999999986655322 22334566666554
No 174
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.57 E-value=6.4e-14 Score=125.02 Aligned_cols=307 Identities=19% Similarity=0.231 Sum_probs=187.5
Q ss_pred eeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEe
Q 016769 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~W 91 (383)
..|.+|.+-|+.|.|+..|..|+|||.|..|.+||...++....... ++...+....|-|..+...+++++.||.+|+=
T Consensus 136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~S-GH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s 214 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFES-GHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVS 214 (559)
T ss_pred hcccCCCCccceeeecccCceeeccCccceEEeehhhccCccccccc-ccccchhhhhccCCCCCcCceeccccCceeee
Confidence 46889999999999999999999999999999999987665443221 12223444456666566889999999999987
Q ss_pred ecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCc
Q 016769 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPK 171 (383)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (383)
.+.......+ +..+..+.. +... .++-+..++
T Consensus 215 ~i~~t~~~e~-t~rl~~h~g--------------------~vhk---------------------------lav~p~sp~ 246 (559)
T KOG1334|consen 215 EILETGYVEN-TKRLAPHEG--------------------PVHK---------------------------LAVEPDSPK 246 (559)
T ss_pred eeccccceec-ceecccccC--------------------ccce---------------------------eeecCCCCC
Confidence 6543211000 000000000 0000 001122222
Q ss_pred eeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
-+..+ +.|+.+.=.|++++....++.-. ....+.++-..+ .+.-|.+. ..+.+|+.|..+++||.+.-.
T Consensus 247 ~f~S~-geD~~v~~~Dlr~~~pa~~~~cr------~~~~~~~v~L~~-Ia~~P~nt---~~faVgG~dqf~RvYD~R~~~ 315 (559)
T KOG1334|consen 247 PFLSC-GEDAVVFHIDLRQDVPAEKFVCR------EADEKERVGLYT-IAVDPRNT---NEFAVGGSDQFARVYDQRRID 315 (559)
T ss_pred ccccc-ccccceeeeeeccCCccceeeee------ccCCccceeeee-EecCCCCc---cccccCChhhhhhhhcccchh
Confidence 23333 34677777888776643332200 000110111111 11222221 246779999999999986421
Q ss_pred C-----ceeee-ecc-----ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCC------e---eEEeeeeecCCC--C
Q 016769 252 I-----PLTAM-KVH-----LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG------S---CVIKKEINLERP--G 309 (383)
Q Consensus 252 ~-----~~~~~-~~h-----~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~------~---~~~~~~~~~~~~--~ 309 (383)
. ++..+ ..| .-.|.++.++.++.-++++=.|-.|.++.-+...+ . ...+...+.|.+ .
T Consensus 316 ~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~T 395 (559)
T KOG1334|consen 316 KEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRT 395 (559)
T ss_pred hccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccc
Confidence 1 11112 112 12478888876655555555677888885433222 1 111111233332 3
Q ss_pred eEEEEE-CCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 310 ISGTSI-RPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 310 i~~~~~-~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
|.++.| -|...|+++|+.=|.|.||+-.+++.+.-+.+-..-|+|+.=+|--..|||.+-|.-||||--
T Consensus 396 VKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP 465 (559)
T KOG1334|consen 396 VKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTP 465 (559)
T ss_pred cceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecC
Confidence 556654 688899999999999999999999988777776668999999999899999999999999965
No 175
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.56 E-value=1e-13 Score=125.43 Aligned_cols=85 Identities=24% Similarity=0.335 Sum_probs=71.3
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
.-+.|.||++=|+|++|+.+|.+|+|||.|-++.|||....+.+..+.. ++...+.++-|.|..+.+.++||+.|..|+
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~T-gHtaNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSIST-GHTANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeec-ccccceeEEeeeccCCCeEEEeccCcceEE
Confidence 3467899999999999999999999999999999999987666654421 233568889898876778899999999999
Q ss_pred EeecCC
Q 016769 90 CWDIEN 95 (383)
Q Consensus 90 ~Wd~~~ 95 (383)
++|+..
T Consensus 121 lfdl~~ 126 (758)
T KOG1310|consen 121 LFDLDS 126 (758)
T ss_pred EEeccc
Confidence 999864
No 176
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.55 E-value=9.2e-13 Score=116.83 Aligned_cols=249 Identities=14% Similarity=0.221 Sum_probs=156.6
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+.+++|.|.-.-..+++|..-|+|=+||+.+.+. ..+. .+.+.....+.
T Consensus 187 ~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~-d~d~---------v~~f~~hs~~V------------------- 237 (498)
T KOG4328|consen 187 RRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEK-DKDG---------VYLFTPHSGPV------------------- 237 (498)
T ss_pred cceEEEEecccCcceEEEEccCCCcEEEEecCCCCC-ccCc---------eEEeccCCccc-------------------
Confidence 468899999974445678888999999999953221 0000 00001000000
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCe--eeEeccCcCCCCCCcCCCCCceeeEEE
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQ 220 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~ 220 (383)
.. ..|.+.... .+.+.+.||+||+=|+++... +..+.. ...+++. +
T Consensus 238 -----------------s~-l~F~P~n~s-~i~ssSyDGtiR~~D~~~~i~e~v~s~~~-----------d~~~fs~-~- 285 (498)
T KOG4328|consen 238 -----------------SG-LKFSPANTS-QIYSSSYDGTIRLQDFEGNISEEVLSLDT-----------DNIWFSS-L- 285 (498)
T ss_pred -----------------cc-eEecCCChh-heeeeccCceeeeeeecchhhHHHhhcCc-----------cceeeee-c-
Confidence 00 012222222 233456789999999987542 222210 1111111 1
Q ss_pred eecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCc-eEEEEcCCcEEEEEccCCCCeeE-
Q 016769 221 AYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHSTGSCV- 298 (383)
Q Consensus 221 ~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~s~~~d~~i~~wdl~~~~~~~~- 298 (383)
.+..+ ...++.+..=|...+||++.++..+..+..|...|..++++|-... ++++|.|++.+|||++....+..
T Consensus 286 d~~~e----~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp 361 (498)
T KOG4328|consen 286 DFSAE----SRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASP 361 (498)
T ss_pred cccCC----CccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCc
Confidence 12211 1235566555689999999877656667778889999999987764 68999999999999976544331
Q ss_pred EeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcC----CCceEEEeccccc------ceeEEEEeCCCCEEEEEe
Q 016769 299 IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR----KGSALAILKYHHA------TCNAVSFSSDCKLMASAS 368 (383)
Q Consensus 299 ~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~h~~------~v~~v~~spd~~~las~s 368 (383)
+. ....|.-.|+++.|||.+..|++.+.|.+|+|||.. .-.+..++. |.. ...-.+|.||..+++.|-
T Consensus 362 ~l-st~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~ 439 (498)
T KOG4328|consen 362 FL-STLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP-HNNRTGRWLTPFKAAWDPDYNLIVVGR 439 (498)
T ss_pred ce-ecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee-ccCcccccccchhheeCCCccEEEEec
Confidence 11 112355679999999999889999999999999993 233333332 322 235568999999999998
Q ss_pred CCCcEEEEeC
Q 016769 369 EDSTVALWEL 378 (383)
Q Consensus 369 ~d~~i~~w~~ 378 (383)
.-..|-|+|-
T Consensus 440 ~~r~IDv~~~ 449 (498)
T KOG4328|consen 440 YPRPIDVFDG 449 (498)
T ss_pred cCcceeEEcC
Confidence 8888888764
No 177
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.55 E-value=3.4e-13 Score=130.51 Aligned_cols=253 Identities=19% Similarity=0.329 Sum_probs=150.9
Q ss_pred CceeeEEEeC--CCCeEEEecCCCeEEEeeCcccc----ccccccc----ccccce--eeeeeecCCCCcceeEecccCC
Q 016769 19 ASVTDVCFHQ--TKPILFAGTTGGELRIWDTVQHR----TVSSSWV----HSAAHG--IVSVATGPSIGLNKVISQGRDG 86 (383)
Q Consensus 19 ~~V~~v~f~~--~~~~L~sgs~D~~v~vW~~~~~~----~~~~~~~----~~~~~~--~~~~~~~~~~~~~~l~s~~~D~ 86 (383)
..|+.+++-. |..+|++|+.||.||||+..... ++...+. ...... ...+.+-. ...+|+++|.-.
T Consensus 1110 t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ--~~G~Ll~tGd~r 1187 (1387)
T KOG1517|consen 1110 TRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQ--QSGHLLVTGDVR 1187 (1387)
T ss_pred CccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhh--hCCeEEecCCee
Confidence 4678888865 44689999999999999853221 1111111 111111 12333333 235677777789
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
.|||||........ . .+.... .+ .-....-.
T Consensus 1188 ~IRIWDa~~E~~~~----------------d---iP~~s~-------t~-----------------------vTaLS~~~ 1218 (1387)
T KOG1517|consen 1188 SIRIWDAHKEQVVA----------------D---IPYGSS-------TL-----------------------VTALSADL 1218 (1387)
T ss_pred EEEEEecccceeEe----------------e---cccCCC-------cc-----------------------ceeecccc
Confidence 99999986532100 0 000000 00 00000001
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCe---eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAER---CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
..|. ++++|-.||.+|+||.+.... +....++. ....++-..++ .++...+++|+.||.|+
T Consensus 1219 ~~gn--~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~--------~~~~Iv~~slq------~~G~~elvSgs~~G~I~ 1282 (1387)
T KOG1517|consen 1219 VHGN--IIAAGFADGSVRVYDRRMAPPDSLVCVYREHN--------DVEPIVHLSLQ------RQGLGELVSGSQDGDIQ 1282 (1387)
T ss_pred cCCc--eEEEeecCCceEEeecccCCccccceeecccC--------CcccceeEEee------cCCCcceeeeccCCeEE
Confidence 1222 567889999999999876543 22222211 11113333332 23444699999999999
Q ss_pred EEeCCCC-CCceeeeeccc--c-CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee---eecCCCCeEEEEEC
Q 016769 244 VWDIRNP-GIPLTAMKVHL--E-PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE---INLERPGISGTSIR 316 (383)
Q Consensus 244 ~wdl~~~-~~~~~~~~~h~--~-~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~---~~~~~~~i~~~~~~ 316 (383)
+||+|.+ ......+..|. + ..+++.+++....+++|+. +.|+||++..... ..++.. +....+.+.+++||
T Consensus 1283 ~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l-~~~k~n~~F~~q~~gs~scL~FH 1360 (1387)
T KOG1517|consen 1283 LLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQL-NIIKYNPGFMGQRIGSVSCLAFH 1360 (1387)
T ss_pred EEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhh-cccccCcccccCcCCCcceeeec
Confidence 9999983 33233333443 3 4889999988888888887 9999999864321 111111 22334567999999
Q ss_pred CCCcEEEEEeCCCcEEEEEcCCCc
Q 016769 317 PDSKIAATAGWDRRVRIYNYRKGS 340 (383)
Q Consensus 317 p~~~~l~s~~~dg~i~iwd~~~~~ 340 (383)
|---.+|+|+.|.+|.||..+.++
T Consensus 1361 P~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1361 PHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred chhHhhhhccCCceEEEeecCCcC
Confidence 999999999999999999876543
No 178
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.55 E-value=1.4e-12 Score=124.74 Aligned_cols=240 Identities=12% Similarity=0.119 Sum_probs=149.8
Q ss_pred cCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCC
Q 016769 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (383)
Q Consensus 17 H~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~ 96 (383)
|...|.+++- .+.+|++|+.+++|.++...++..-..+.-.. -.+-.+++.. ++++++.||.|-.|++-++.+.
T Consensus 55 ~g~~v~~ia~--~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rft--lp~r~~~v~g--~g~~iaagsdD~~vK~~~~~D~ 128 (933)
T KOG1274|consen 55 SGELVSSIAC--YSNHFLTGSEQNTVLRYKFPSGEEDTILARFT--LPIRDLAVSG--SGKMIAAGSDDTAVKLLNLDDS 128 (933)
T ss_pred cCceeEEEee--cccceEEeeccceEEEeeCCCCCccceeeeee--ccceEEEEec--CCcEEEeecCceeEEEEecccc
Confidence 7788887765 55599999999999999987765433222111 2344555554 4688999999999999998665
Q ss_pred CCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeec
Q 016769 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVA 176 (383)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (383)
... ..++.+ +.+. .-.++.+.+ .+++++
T Consensus 129 s~~----~~lrgh----------~apV-------------------------------------l~l~~~p~~-~fLAvs 156 (933)
T KOG1274|consen 129 SQE----KVLRGH----------DAPV-------------------------------------LQLSYDPKG-NFLAVS 156 (933)
T ss_pred chh----eeeccc----------CCce-------------------------------------eeeeEcCCC-CEEEEE
Confidence 211 011000 0000 001122222 344444
Q ss_pred cCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceee
Q 016769 177 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 256 (383)
Q Consensus 177 g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~ 256 (383)
+-+|+|++||+.++....++.. ..+-.+..
T Consensus 157 -s~dG~v~iw~~~~~~~~~tl~~-----------------------------------------v~k~n~~~-------- 186 (933)
T KOG1274|consen 157 -SCDGKVQIWDLQDGILSKTLTG-----------------------------------------VDKDNEFI-------- 186 (933)
T ss_pred -ecCceEEEEEcccchhhhhccc-----------------------------------------CCcccccc--------
Confidence 4568888888876654333321 00000000
Q ss_pred eeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEc
Q 016769 257 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336 (383)
Q Consensus 257 ~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~ 336 (383)
-...+..++|+|++..++..+.|+.|++|+.+.-.. .++...+.....++.+.|+|+|+|||+++.||.|.|||.
T Consensus 187 ---~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~--~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv 261 (933)
T KOG1274|consen 187 ---LSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWEL--QFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNV 261 (933)
T ss_pred ---ccceeeeeeecCCCCeEEeeccCCeEEEEccCCcee--heeecccccccceEEEEEcCCCcEEeeeccCCcEEEEec
Confidence 023455678999988889999999999998764332 222233334445899999999999999999999999999
Q ss_pred CCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcE
Q 016769 337 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTV 373 (383)
Q Consensus 337 ~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i 373 (383)
++... ......|.+++|.|+..-+-.-..-|+.
T Consensus 262 ~t~~~----~~~~~~Vc~~aw~p~~n~it~~~~~g~~ 294 (933)
T KOG1274|consen 262 DTHER----HEFKRAVCCEAWKPNANAITLITALGTL 294 (933)
T ss_pred ccchh----ccccceeEEEecCCCCCeeEEEeecccc
Confidence 87332 1124579999999988755433333333
No 179
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.55 E-value=1.1e-13 Score=118.35 Aligned_cols=146 Identities=21% Similarity=0.234 Sum_probs=113.6
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeC--CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE--SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
.++++...|.|++||..+ +..+..+++|...++.+.|.. ....+.+|+.||+|++||++.......+..... ....
T Consensus 42 ~vav~lSngsv~lyd~~t-g~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~-~~~~ 119 (376)
T KOG1188|consen 42 AVAVSLSNGSVRLYDKGT-GQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQ-SGTP 119 (376)
T ss_pred eEEEEecCCeEEEEeccc-hhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCC-CCCc
Confidence 467788899999999987 455778888888788888843 456789999999999999987654333322211 1235
Q ss_pred eEEEEECCCCcEEEEEe----CCCcEEEEEcCCCce-EEEe-cccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 310 ISGTSIRPDSKIAATAG----WDRRVRIYNYRKGSA-LAIL-KYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~----~dg~i~iwd~~~~~~-~~~~-~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
..+++.+..++.+++|+ .|-.+.+||++..++ +..+ ..|...|++|.|+|... +|+|||-||.|.|||+.
T Consensus 120 f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~ 196 (376)
T KOG1188|consen 120 FICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK 196 (376)
T ss_pred ceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence 67777777788888876 467899999988766 5544 46999999999999765 99999999999999995
No 180
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.53 E-value=3.1e-13 Score=113.35 Aligned_cols=148 Identities=20% Similarity=0.283 Sum_probs=111.8
Q ss_pred eEEEEEeCCCcEEEEeCCCCC--CceeeeeccccCeEEEEEeCCC-CceEEEEcCCcEEEEEccCCCCeeEEeeeeecCC
Q 016769 231 VNVLAGYEDGSILVWDIRNPG--IPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 307 (383)
Q Consensus 231 ~~~~sg~~dg~i~~wdl~~~~--~~~~~~~~h~~~v~~~~~~~~~-~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~ 307 (383)
.++.+++-|-+..|||++++. ..-..+-.|-..|..++|...+ +.+++.|.||.+|++||+....+..+... ....
T Consensus 164 ~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~-p~~~ 242 (364)
T KOG0290|consen 164 NLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYED-PSPS 242 (364)
T ss_pred ceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecC-CCCC
Confidence 467889999999999998741 1234466799999999997644 46799999999999999876544433211 1112
Q ss_pred CCeEEEEECCC-CcEEEEEeCC-CcEEEEEcCCC-ceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 308 PGISGTSIRPD-SKIAATAGWD-RRVRIYNYRKG-SALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 308 ~~i~~~~~~p~-~~~l~s~~~d-g~i~iwd~~~~-~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
...-.++++++ .+|+|+-..| .+|.|.|++-. .++..+++|++.|+.++|.|-.+ +|+|++.|..+.+||+.
T Consensus 243 ~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~ 318 (364)
T KOG0290|consen 243 TPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQ 318 (364)
T ss_pred CcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecc
Confidence 23455666653 4677765544 57889999764 56789999999999999999765 99999999999999995
No 181
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.53 E-value=1.1e-11 Score=118.17 Aligned_cols=301 Identities=18% Similarity=0.267 Sum_probs=171.2
Q ss_pred ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcc--cccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeec
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ--HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~ 93 (383)
.|+..+++.++||.++++|+|-.||+|.+|.-.. ......-..|-+...+.+++|+. +|.+|+|||..+.+-+|.+
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~--~G~~LlSGG~E~VLv~Wq~ 280 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSS--DGAYLLSGGREGVLVLWQL 280 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEec--CCceEeecccceEEEEEee
Confidence 5778899999999999999999999999998544 22111111243334688899988 5789999999999999999
Q ss_pred CCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCcee
Q 016769 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYM 173 (383)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (383)
++++..-.|.+ ++ +- .. ...++++..+.
T Consensus 281 ~T~~kqfLPRL----gs-----------~I-----------------------------------~~--i~vS~ds~~~s 308 (792)
T KOG1963|consen 281 ETGKKQFLPRL----GS-----------PI-----------------------------------LH--IVVSPDSDLYS 308 (792)
T ss_pred cCCCccccccc----CC-----------ee-----------------------------------EE--EEEcCCCCeEE
Confidence 98752111100 00 00 00 01123333333
Q ss_pred eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc
Q 016769 174 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 253 (383)
Q Consensus 174 ~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~ 253 (383)
++.+ |+.|.+-.+.+......+...... .+......+.+...+. +-|. . ..++-.+..|.|.+||+-+....
T Consensus 309 l~~~--DNqI~li~~~dl~~k~tIsgi~~~-~~~~k~~~~~l~t~~~-idpr--~--~~~vln~~~g~vQ~ydl~td~~i 380 (792)
T KOG1963|consen 309 LVLE--DNQIHLIKASDLEIKSTISGIKPP-TPSTKTRPQSLTTGVS-IDPR--T--NSLVLNGHPGHVQFYDLYTDSTI 380 (792)
T ss_pred EEec--CceEEEEeccchhhhhhccCccCC-CccccccccccceeEE-EcCC--C--CceeecCCCceEEEEecccccee
Confidence 3322 445554443332221222111100 0010111122222221 2221 1 12455778899999998764432
Q ss_pred eeeee-----------ccccCeEEEEEeCCCCceEEE--------EcC--CcEEEEEccCCCCeeEEeeee-ecCCCCeE
Q 016769 254 LTAMK-----------VHLEPVLCLSIDESCNGGISG--------GAD--QKIVLYNLDHSTGSCVIKKEI-NLERPGIS 311 (383)
Q Consensus 254 ~~~~~-----------~h~~~v~~~~~~~~~~~~~s~--------~~d--~~i~~wdl~~~~~~~~~~~~~-~~~~~~i~ 311 (383)
..+. .+...+..+..+..+...++. ..| ..+++|-.+..+....+...+ ..|+..+.
T Consensus 381 -~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~v 459 (792)
T KOG1963|consen 381 -YKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFV 459 (792)
T ss_pred -eeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeE
Confidence 2111 122234455555555554443 223 346789877665555444332 34444444
Q ss_pred EEEE-CCCCc-EEEEEeCCCcEEEEEcC------CCceEE----EecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 312 GTSI-RPDSK-IAATAGWDRRVRIYNYR------KGSALA----ILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~-~p~~~-~l~s~~~dg~i~iwd~~------~~~~~~----~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
...| +|... .+++++.||.+++|-+. .....+ .-..|..++.+.+||.||.. .+.|.|++|.+||..
T Consensus 460 at~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGsl-la~s~~~~Itiwd~~ 538 (792)
T KOG1963|consen 460 ATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSL-LAVSFDDTITIWDYD 538 (792)
T ss_pred EEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcE-EEEecCCEEEEecCC
Confidence 4444 44333 78999999999999883 222222 12247889999999999955 557788899999986
Q ss_pred C
Q 016769 380 P 380 (383)
Q Consensus 380 ~ 380 (383)
.
T Consensus 539 ~ 539 (792)
T KOG1963|consen 539 T 539 (792)
T ss_pred C
Confidence 4
No 182
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.52 E-value=4.1e-14 Score=138.10 Aligned_cols=192 Identities=21% Similarity=0.346 Sum_probs=130.0
Q ss_pred eeeccCCcceEEEEecCCC---CeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTA---ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~---~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
++++|..||.|.+||...- .....+... -.+.+. +.++ .|.+. ..+.+++|+.||.|.|||+++
T Consensus 82 lIaGG~edG~I~ly~p~~~~~~~~~~~la~~-------~~h~G~--V~gL-DfN~~---q~nlLASGa~~geI~iWDlnn 148 (1049)
T KOG0307|consen 82 LIAGGLEDGNIVLYDPASIIANASEEVLATK-------SKHTGP--VLGL-DFNPF---QGNLLASGADDGEILIWDLNK 148 (1049)
T ss_pred eeeccccCCceEEecchhhccCcchHHHhhh-------cccCCc--eeee-ecccc---CCceeeccCCCCcEEEeccCC
Confidence 5778888999999997542 111111110 011222 2221 23222 223688999999999999998
Q ss_pred CCCceee-eeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCc-EEEEEe
Q 016769 250 PGIPLTA-MKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK-IAATAG 326 (383)
Q Consensus 250 ~~~~~~~-~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~s~~ 326 (383)
...+... -+...+.|.+++|...-. .|++++.++++.|||++.... .+........-.++.++|+|+.. .+++++
T Consensus 149 ~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~p--ii~ls~~~~~~~~S~l~WhP~~aTql~~As 226 (1049)
T KOG0307|consen 149 PETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKP--IIKLSDTPGRMHCSVLAWHPDHATQLLVAS 226 (1049)
T ss_pred cCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCc--ccccccCCCccceeeeeeCCCCceeeeeec
Confidence 6655433 122456789999976554 467888999999999986532 11111111123478999999974 455555
Q ss_pred CCC---cEEEEEcCC-CceEEEecccccceeEEEEeCCC-CEEEEEeCCCcEEEEeCC
Q 016769 327 WDR---RVRIYNYRK-GSALAILKYHHATCNAVSFSSDC-KLMASASEDSTVALWELY 379 (383)
Q Consensus 327 ~dg---~i~iwd~~~-~~~~~~~~~h~~~v~~v~~spd~-~~las~s~d~~i~~w~~~ 379 (383)
.|. .|.+||++. ..+++++.+|+..|.++.|++.+ ++|+|++.|+.|.+||..
T Consensus 227 ~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~ 284 (1049)
T KOG0307|consen 227 GDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPN 284 (1049)
T ss_pred CCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCC
Confidence 544 799999965 45667788999999999999876 799999999999999974
No 183
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.51 E-value=3.7e-11 Score=110.06 Aligned_cols=264 Identities=11% Similarity=0.145 Sum_probs=144.5
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEec-CCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEec-ccCCe
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGT-TGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ-GRDGT 87 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs-~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~-~~D~t 87 (383)
.+.++. +.+....|+++|++++|+.++ .++.|.+|++.....+..............+.+++ +++.++++ ..++.
T Consensus 27 ~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~--~g~~l~v~~~~~~~ 103 (330)
T PRK11028 27 LLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDH--QGRFLFSASYNANC 103 (330)
T ss_pred eeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECC--CCCEEEEEEcCCCe
Confidence 334443 346677899999999887664 57899999986322221111111111234567777 35666654 46899
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
+.+|++++.......... .... . ... ...+.+
T Consensus 104 v~v~~~~~~g~~~~~~~~-------------~~~~-------~--------------------------~~~--~~~~~p 135 (330)
T PRK11028 104 VSVSPLDKDGIPVAPIQI-------------IEGL-------E--------------------------GCH--SANIDP 135 (330)
T ss_pred EEEEEECCCCCCCCceee-------------ccCC-------C--------------------------ccc--EeEeCC
Confidence 999999643211100000 0000 0 000 011234
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEE-eCCCcEEEEe
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG-YEDGSILVWD 246 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg-~~dg~i~~wd 246 (383)
++ +++.++...++.|.+||+++...+............. ...+. + .|.|+ +. .+.+. ..+++|.+||
T Consensus 136 ~g-~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g--~~p~~--~---~~~pd---g~-~lyv~~~~~~~v~v~~ 203 (330)
T PRK11028 136 DN-RTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEG--AGPRH--M---VFHPN---QQ-YAYCVNELNSSVDVWQ 203 (330)
T ss_pred CC-CEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCC--CCCce--E---EECCC---CC-EEEEEecCCCEEEEEE
Confidence 44 4566666777899999997743322110000000000 00011 1 24443 22 34444 4589999999
Q ss_pred CCCC-CC--ceeeeecc------ccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEEC
Q 016769 247 IRNP-GI--PLTAMKVH------LEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 316 (383)
Q Consensus 247 l~~~-~~--~~~~~~~h------~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~ 316 (383)
+... +. .+..+..+ ......+.++|+++.++++. .++.|.+|+++..+....+....... .....+.|+
T Consensus 204 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~-~~p~~~~~~ 282 (330)
T PRK11028 204 LKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTE-TQPRGFNID 282 (330)
T ss_pred EeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEecc-ccCCceEEC
Confidence 9742 11 11222111 11223577899998887775 47889999997654433333332222 345678999
Q ss_pred CCCcEEEEEeC-CCcEEEEEcC
Q 016769 317 PDSKIAATAGW-DRRVRIYNYR 337 (383)
Q Consensus 317 p~~~~l~s~~~-dg~i~iwd~~ 337 (383)
|+|++|+++.. +++|.+|+++
T Consensus 283 ~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 283 HSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred CCCCEEEEEEccCCcEEEEEEc
Confidence 99999888775 8999999885
No 184
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.51 E-value=1.3e-11 Score=117.75 Aligned_cols=334 Identities=17% Similarity=0.220 Sum_probs=189.8
Q ss_pred eEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCc-ceeEecccCCeEEEeecCCCCCCCC
Q 016769 23 DVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGL-NKVISQGRDGTVKCWDIENGGLSSN 101 (383)
Q Consensus 23 ~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~D~ti~~Wd~~~~~~~~~ 101 (383)
.-.|++|++.|+- ..+..|.|+-+.++.|+..+..|. ..+..+.+.+.... ..+++++.||+|++||..+++..++
T Consensus 21 ~avfSnD~k~l~~-~~~~~V~VyS~~Tg~~i~~l~~~~--a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt 97 (792)
T KOG1963|consen 21 PAVFSNDAKFLFL-CTGNFVKVYSTATGECITSLEDHT--APLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKT 97 (792)
T ss_pred ccccccCCcEEEE-eeCCEEEEEecchHhhhhhccccc--CccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEE
Confidence 3468999998884 556689999999999988765554 34566666554222 4677999999999999998865432
Q ss_pred CeeeeecCceee----ee---EEeeccccccccccCCCCccceeccCccccc-CccccccccCCccceecccCCCCCcee
Q 016769 102 PSLTIKTNSYHF----CK---LSLVKEPYANAKQANEPKDCYEREVGETVDT-DSLCDSKESNRSFEIIDDVPAEGPKYM 173 (383)
Q Consensus 102 ~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (383)
.....+.+.... .. ...+.............+.+........... ....+..........+. ....+ .+.
T Consensus 98 ~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~-~~~~g-e~~ 175 (792)
T KOG1963|consen 98 FDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIV-DNNSG-EFK 175 (792)
T ss_pred EecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEE-EcCCc-eEE
Confidence 211111111000 00 0000000000000000000000000000000 00000000000000000 01111 111
Q ss_pred eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe-CC--CC
Q 016769 174 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD-IR--NP 250 (383)
Q Consensus 174 ~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd-l~--~~ 250 (383)
.+. ....+.+|....+... .... .....+. +......++|.. ..+++|..||.|.+|. +. ..
T Consensus 176 ~i~--~~~~~~~~~v~~~~~~-~~~~---~~~~~Ht-----f~~t~~~~spn~----~~~Aa~d~dGrI~vw~d~~~~~~ 240 (792)
T KOG1963|consen 176 GIV--HMCKIHIYFVPKHTKH-TSSR---DITVHHT-----FNITCVALSPNE----RYLAAGDSDGRILVWRDFGSSDD 240 (792)
T ss_pred EEE--EeeeEEEEEeccccee-eccc---hhhhhhc-----ccceeEEecccc----ceEEEeccCCcEEEEeccccccc
Confidence 111 2345777877664411 1110 0001111 111223345542 3578899999999994 33 12
Q ss_pred CCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCc
Q 016769 251 GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRR 330 (383)
Q Consensus 251 ~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~ 330 (383)
....+.+.-|..+|.+++|+.+|.++++||..+.+.+|.++... . +.+..-.+.|..+.++||+.+.+....|..
T Consensus 241 ~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~--k---qfLPRLgs~I~~i~vS~ds~~~sl~~~DNq 315 (792)
T KOG1963|consen 241 SETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK--K---QFLPRLGSPILHIVVSPDSDLYSLVLEDNQ 315 (792)
T ss_pred cccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC--c---ccccccCCeeEEEEEcCCCCeEEEEecCce
Confidence 23356678889999999999999999999999999999987543 1 223344567999999999999999999999
Q ss_pred EEEEEcCCCceEEEecc-----------cccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 331 VRIYNYRKGSALAILKY-----------HHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 331 i~iwd~~~~~~~~~~~~-----------h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
|.+..+.+.....++++ .+.-...++++|.-+.++-.+..+.|.+||++..
T Consensus 316 I~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td 377 (792)
T KOG1963|consen 316 IHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTD 377 (792)
T ss_pred EEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEecccc
Confidence 99998866543333322 2334567789997788999999999999999754
No 185
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.50 E-value=1.1e-12 Score=108.70 Aligned_cols=158 Identities=21% Similarity=0.364 Sum_probs=115.0
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
.+..+++++|-.++.+-+||+.++..+..+++-..+.+...++.+..+..... +.-+ .=++|+.+..+..|.+
T Consensus 162 c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldya---s~~~----rGisgga~dkl~~~Sl 234 (323)
T KOG0322|consen 162 CGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYA---SSCD----RGISGGADDKLVMYSL 234 (323)
T ss_pred ccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeec---hhhc----CCcCCCccccceeeee
Confidence 34567888999999999999999987777777666666555565555543322 2111 1256788888999988
Q ss_pred CCCC--Cce-eeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEE
Q 016769 248 RNPG--IPL-TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 324 (383)
Q Consensus 248 ~~~~--~~~-~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s 324 (383)
.-.. ..+ ..++-.+-.|..+.+-++++.++++|.|++||+|+.++.+. + ..+++|..+|++++|+|+...+|+
T Consensus 235 ~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~p--L--AVLkyHsagvn~vAfspd~~lmAa 310 (323)
T KOG0322|consen 235 NHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNP--L--AVLKYHSAGVNAVAFSPDCELMAA 310 (323)
T ss_pred ccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCc--h--hhhhhhhcceeEEEeCCCCchhhh
Confidence 6431 111 11222233467788888889999999999999999875432 1 235678889999999999999999
Q ss_pred EeCCCcEEEEEc
Q 016769 325 AGWDRRVRIYNY 336 (383)
Q Consensus 325 ~~~dg~i~iwd~ 336 (383)
++.|++|.+|++
T Consensus 311 askD~rISLWkL 322 (323)
T KOG0322|consen 311 ASKDARISLWKL 322 (323)
T ss_pred ccCCceEEeeec
Confidence 999999999987
No 186
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.48 E-value=1.6e-12 Score=109.93 Aligned_cols=124 Identities=19% Similarity=0.253 Sum_probs=105.5
Q ss_pred eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEEC-C-CCcEEEEEeCCCcEEEEE
Q 016769 258 KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR-P-DSKIAATAGWDRRVRIYN 335 (383)
Q Consensus 258 ~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~-p-~~~~l~s~~~dg~i~iwd 335 (383)
.+|.+-|.++.||..|+.+++|+.|++++|||+++.++........+.+.+.|..+.+- | -|+.+|+++.|++++||.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 46788899999999999999999999999999988888887777888899999999884 4 488999999999999997
Q ss_pred cCC------C---ceEEEecccccceeEEEEeCC--CCEEEEEeCCCcEEEEeCCCC
Q 016769 336 YRK------G---SALAILKYHHATCNAVSFSSD--CKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 336 ~~~------~---~~~~~~~~h~~~v~~v~~spd--~~~las~s~d~~i~~w~~~~~ 381 (383)
-.. + ....++..-...|.+|.|.|. |-+||+++.||++|||+..+|
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp 146 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDP 146 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCc
Confidence 621 1 123456667788999999995 559999999999999998766
No 187
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.47 E-value=2.4e-13 Score=125.01 Aligned_cols=144 Identities=19% Similarity=0.249 Sum_probs=114.9
Q ss_pred EeCCCcEEEEeCCCCCC-ceeeeec--cccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEE---eeeeecCCC
Q 016769 236 GYEDGSILVWDIRNPGI-PLTAMKV--HLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVI---KKEINLERP 308 (383)
Q Consensus 236 g~~dg~i~~wdl~~~~~-~~~~~~~--h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~---~~~~~~~~~ 308 (383)
.+.-|.|-||+++.++. +-..+.. ....|..+.|+|-.. .++.++.|+.|++|.+.......-. .+.+..+..
T Consensus 599 ~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~e 678 (1012)
T KOG1445|consen 599 AGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGE 678 (1012)
T ss_pred cCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccc
Confidence 45678999999988764 2222221 234688888888544 6899999999999998654322111 234566778
Q ss_pred CeEEEEECCCC-cEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 309 GISGTSIRPDS-KIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 309 ~i~~~~~~p~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.|+.+.|+|=. ..++++++|-+|++||+..++....+.+|...|..++|||||+.+|+.+.||+|++|+-.
T Consensus 679 KI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Pr 750 (1012)
T KOG1445|consen 679 KITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPR 750 (1012)
T ss_pred eEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCC
Confidence 89999999853 578999999999999999999999999999999999999999999999999999999864
No 188
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.47 E-value=3.9e-12 Score=111.01 Aligned_cols=142 Identities=20% Similarity=0.367 Sum_probs=113.5
Q ss_pred EEEEEeCCCcEEEEeCCCC------CCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeee
Q 016769 232 NVLAGYEDGSILVWDIRNP------GIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEIN 304 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~------~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~ 304 (383)
.+++|++|-+|+||++=.. ..+...+.+|...|.-+.|+|... .|+++|.|++|.+||+..... ++. +.
T Consensus 96 vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgea--li~--l~ 171 (472)
T KOG0303|consen 96 VIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEA--LIT--LD 171 (472)
T ss_pred eeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCce--eee--cC
Confidence 5788999999999998432 345778899999999999998765 578999999999999976543 222 22
Q ss_pred cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccc-eeEEEEeCCCCEEEEE---eCCCcEEEEeC
Q 016769 305 LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT-CNAVSFSSDCKLMASA---SEDSTVALWEL 378 (383)
Q Consensus 305 ~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~v~~spd~~~las~---s~d~~i~~w~~ 378 (383)
|...|.+++|+-||.++++++.|++|||||.++++.+..-.+|++. -..+.|-.+|+.+-|| ..+..+-|||-
T Consensus 172 -hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp 248 (472)
T KOG0303|consen 172 -HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDP 248 (472)
T ss_pred -CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCc
Confidence 6678999999999999999999999999999999998766778753 4556687888854443 34667888875
No 189
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.46 E-value=4.5e-12 Score=106.10 Aligned_cols=130 Identities=18% Similarity=0.384 Sum_probs=95.4
Q ss_pred cEEEEeCCCCCCceeeeecc-ccCeEEEEEeCCCCceEE--EEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC
Q 016769 241 SILVWDIRNPGIPLTAMKVH-LEPVLCLSIDESCNGGIS--GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 241 ~i~~wdl~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~s--~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p 317 (383)
...+|.++....+...+... ..+|..++|+|++..++. |..++.|.+||++. ... .......++.+.|+|
T Consensus 38 ~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~---~~i----~~~~~~~~n~i~wsP 110 (194)
T PF08662_consen 38 EFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKG---KKI----FSFGTQPRNTISWSP 110 (194)
T ss_pred eEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCcc---cEe----EeecCCCceEEEECC
Confidence 34555554434444444433 347999999999988654 34567899999862 111 222345688999999
Q ss_pred CCcEEEEEeCC---CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeC------CCcEEEEeCC
Q 016769 318 DSKIAATAGWD---RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE------DSTVALWELY 379 (383)
Q Consensus 318 ~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~------d~~i~~w~~~ 379 (383)
+|++|+.++.+ |.+.+||+++.+.+.... |. .+..++|||||++|++++. |+.++||++.
T Consensus 111 ~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 111 DGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred CCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence 99999998854 669999999888887664 33 5789999999999998774 8899999873
No 190
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.46 E-value=1.1e-11 Score=107.46 Aligned_cols=176 Identities=17% Similarity=0.266 Sum_probs=124.2
Q ss_pred CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeee
Q 016769 178 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 257 (383)
Q Consensus 178 ~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~ 257 (383)
.+.+.+++.+...+..++.+.-+ + .+++ |. + ++++++.+-++. |.||||+.-. ++.++
T Consensus 65 ~qpr~Lkv~~~Kk~~~ICe~~fp---------t--~IL~--Vr-m------Nr~RLvV~Lee~-IyIydI~~Mk-lLhTI 122 (391)
T KOG2110|consen 65 KQPRKLKVVHFKKKTTICEIFFP---------T--SILA--VR-M------NRKRLVVCLEES-IYIYDIKDMK-LLHTI 122 (391)
T ss_pred CCCceEEEEEcccCceEEEEecC---------C--ceEE--EE-E------ccceEEEEEccc-EEEEecccce-eehhh
Confidence 44467888888777766665421 1 1222 21 1 134677776655 9999998632 34433
Q ss_pred e---ccccCeEEEEEeCCCCceEE--EEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCc-E
Q 016769 258 K---VHLEPVLCLSIDESCNGGIS--GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRR-V 331 (383)
Q Consensus 258 ~---~h~~~v~~~~~~~~~~~~~s--~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~-i 331 (383)
. .+...+..++++....+++. .-.-|.|.+||+..-+.. ..+..|.+.+.+++|+++|.+||++|..|+ |
T Consensus 123 ~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v----~~I~aH~~~lAalafs~~G~llATASeKGTVI 198 (391)
T KOG2110|consen 123 ETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPV----NTINAHKGPLAALAFSPDGTLLATASEKGTVI 198 (391)
T ss_pred hccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceee----eEEEecCCceeEEEECCCCCEEEEeccCceEE
Confidence 2 12334555666655445543 224688999998754322 234578899999999999999999999886 6
Q ss_pred EEEEcCCCceEEEecc--cccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 332 RIYNYRKGSALAILKY--HHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 332 ~iwd~~~~~~~~~~~~--h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
|+|.+.+|+.++.++. ..-.|.+++|+||+++|++.|..++|++|.+.
T Consensus 199 RVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~ 248 (391)
T KOG2110|consen 199 RVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLE 248 (391)
T ss_pred EEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEec
Confidence 8999999999988864 34468999999999999999999999999885
No 191
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.46 E-value=4.6e-13 Score=117.09 Aligned_cols=147 Identities=22% Similarity=0.316 Sum_probs=122.9
Q ss_pred EEEEEeCCCcEEEEeCCCCC--------CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccC------CC---
Q 016769 232 NVLAGYEDGSILVWDIRNPG--------IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH------ST--- 294 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~------~~--- 294 (383)
.+.+|+.|..|++|.+.... ..+..+..|...|+++.|++++..+++|+.++.+.+|-... .+
T Consensus 28 ~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~ 107 (434)
T KOG1009|consen 28 KLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEAD 107 (434)
T ss_pred ceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhh
Confidence 47899999999999875321 12345678999999999999999999999999999997651 11
Q ss_pred ---CeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCC
Q 016769 295 ---GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 295 ---~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~ 371 (383)
.....++....+...+..++++|+++++++++-|..+++||+..|.....+..|...++-++|.|-++++++-|.|.
T Consensus 108 ~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr 187 (434)
T KOG1009|consen 108 LNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDR 187 (434)
T ss_pred hCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCc
Confidence 11233344556777899999999999999999999999999999999999999999999999999999999999998
Q ss_pred cEEEEeC
Q 016769 372 TVALWEL 378 (383)
Q Consensus 372 ~i~~w~~ 378 (383)
..+.+.+
T Consensus 188 ~~~~~~~ 194 (434)
T KOG1009|consen 188 HPEGFSA 194 (434)
T ss_pred ccceeee
Confidence 7666654
No 192
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.45 E-value=2.2e-12 Score=109.47 Aligned_cols=147 Identities=13% Similarity=0.224 Sum_probs=116.2
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee---------
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE--------- 302 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~--------- 302 (383)
.++.|..||.|-|||+.+.+ +-+.+.+|..||.+++|++++..|++++.|..|++||+..++....+...
T Consensus 37 ~lAvGc~nG~vvI~D~~T~~-iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~h 115 (405)
T KOG1273|consen 37 YLAVGCANGRVVIYDFDTFR-IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWH 115 (405)
T ss_pred eeeeeccCCcEEEEEccccc-hhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEccCccceeeec
Confidence 57889999999999998743 45667899999999999999999999999999999999766532211100
Q ss_pred -----------ee-------cC-----------CC----CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccc
Q 016769 303 -----------IN-------LE-----------RP----GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349 (383)
Q Consensus 303 -----------~~-------~~-----------~~----~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~ 349 (383)
++ .. .+ ......|.+-|+|+++|..-|++.++|..+.+.+..++--.
T Consensus 116 p~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits 195 (405)
T KOG1273|consen 116 PRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITS 195 (405)
T ss_pred cccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeech
Confidence 00 00 00 01123477889999999999999999999998887665433
Q ss_pred -cceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 350 -ATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 350 -~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
..|..+.|+..|+.|+.-+.|..||.|++.
T Consensus 196 ~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 196 VQAIKQIIVSRKGRFLIINTSDRVIRTYEIS 226 (405)
T ss_pred heeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence 678999999999999999999999999886
No 193
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.45 E-value=1.8e-11 Score=100.46 Aligned_cols=140 Identities=14% Similarity=0.194 Sum_probs=98.2
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee--e---ecC-
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE--I---NLE- 306 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~--~---~~~- 306 (383)
++.++.|+.+.-||++++ .....+++|++.+-++.--.....+++|+.||++++||+.......++... . ..+
T Consensus 129 i~~AgGD~~~y~~dlE~G-~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~ 207 (325)
T KOG0649|consen 129 ILFAGGDGVIYQVDLEDG-RIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDW 207 (325)
T ss_pred EEEecCCeEEEEEEecCC-EEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCccc
Confidence 566668999999999985 457789999999999987444456799999999999999765433322211 0 101
Q ss_pred CCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 307 RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 307 ~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
...|-+++.+ ...+++|+ ..++.+|+++..++..++. ....+..+.|-- +.+.++++.+.|.-|.+.
T Consensus 208 g~wigala~~--edWlvCGg-Gp~lslwhLrsse~t~vfp-ipa~v~~v~F~~--d~vl~~G~g~~v~~~~l~ 274 (325)
T KOG0649|consen 208 GKWIGALAVN--EDWLVCGG-GPKLSLWHLRSSESTCVFP-IPARVHLVDFVD--DCVLIGGEGNHVQSYTLN 274 (325)
T ss_pred CceeEEEecc--CceEEecC-CCceeEEeccCCCceEEEe-cccceeEeeeec--ceEEEeccccceeeeeec
Confidence 1224445544 44778765 6679999999888776553 556677778853 467788888888888663
No 194
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.44 E-value=1.4e-11 Score=103.63 Aligned_cols=253 Identities=16% Similarity=0.201 Sum_probs=146.1
Q ss_pred eecCCceeeEEEeCCC-----CeEEEecCCCeEEEeeCcc--ccc--ccccccc---cccceeeeeeecCCCCcceeEec
Q 016769 15 RGHRASVTDVCFHQTK-----PILFAGTTGGELRIWDTVQ--HRT--VSSSWVH---SAAHGIVSVATGPSIGLNKVISQ 82 (383)
Q Consensus 15 ~gH~~~V~~v~f~~~~-----~~L~sgs~D~~v~vW~~~~--~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~l~s~ 82 (383)
..|.-+++.+-|.|+. ++|||.|. .+|+|.+.. .+. ...+..+ .....+.+..+.. .+.+++.+.
T Consensus 93 fd~~YP~tK~~wiPd~~g~~pdlLATs~D--~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne-~dp~~igtS 169 (364)
T KOG0290|consen 93 FDHPYPVTKLMWIPDSKGVYPDLLATSSD--FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNE-VDPNLIGTS 169 (364)
T ss_pred CCCCCCccceEecCCccccCcchhhcccC--eEEEEeccCcCCceehhhhhccCcccccCCccccccccc-CCcceeEee
Confidence 3688899999999986 36776544 599999763 211 1111111 1112334443332 245788899
Q ss_pred ccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCcccee
Q 016769 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEII 162 (383)
Q Consensus 83 ~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (383)
|.|.|.-+||++++......+ .++. ..+.+++++++
T Consensus 170 SiDTTCTiWdie~~~~~~vkT-------------QLIA----------HDKEV~DIaf~--------------------- 205 (364)
T KOG0290|consen 170 SIDTTCTIWDIETGVSGTVKT-------------QLIA----------HDKEVYDIAFL--------------------- 205 (364)
T ss_pred cccCeEEEEEEeeccccceee-------------EEEe----------cCcceeEEEec---------------------
Confidence 999999999999863211111 1110 11112222221
Q ss_pred cccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEE-EeCCCc
Q 016769 163 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA-GYEDGS 241 (383)
Q Consensus 163 ~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-g~~dg~ 241 (383)
..+.+ ++++-+.||.+|++||+....-.-+=++ ..+....+++ .++ .++...+++ +.....
T Consensus 206 ----~~s~~-~FASvgaDGSvRmFDLR~leHSTIIYE~-------p~~~~pLlRL-----swn-kqDpnymATf~~dS~~ 267 (364)
T KOG0290|consen 206 ----KGSRD-VFASVGADGSVRMFDLRSLEHSTIIYED-------PSPSTPLLRL-----SWN-KQDPNYMATFAMDSNK 267 (364)
T ss_pred ----cCccc-eEEEecCCCcEEEEEecccccceEEecC-------CCCCCcceee-----ccC-cCCchHHhhhhcCCce
Confidence 11122 3334455899999999886643322111 0111122221 111 122223333 556678
Q ss_pred EEEEeCCCCCCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeee-ecCCCCeEEEEECCC-
Q 016769 242 ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEI-NLERPGISGTSIRPD- 318 (383)
Q Consensus 242 i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~-~~~~~~i~~~~~~p~- 318 (383)
|.+-|+|.+..++..+..|...|+.++|.|... .+.++|.|..+.+||++..-........+ -...++|+.+.++|.
T Consensus 268 V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~ 347 (364)
T KOG0290|consen 268 VVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQ 347 (364)
T ss_pred EEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccC
Confidence 999999999999999999999999999977544 57899999999999997543311111111 113457888888854
Q ss_pred CcEEEEEeCCCcEEE
Q 016769 319 SKIAATAGWDRRVRI 333 (383)
Q Consensus 319 ~~~l~s~~~dg~i~i 333 (383)
+..|+. +.++++.+
T Consensus 348 ~Dwiai-~~~kklei 361 (364)
T KOG0290|consen 348 PDWIAI-CFGKKLEI 361 (364)
T ss_pred CCEEEE-EecCeeeE
Confidence 345554 44555554
No 195
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.43 E-value=3e-11 Score=105.87 Aligned_cols=85 Identities=26% Similarity=0.503 Sum_probs=63.6
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccc------ccc---cccc-----cccccceeeeeeecCCCCc
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH------RTV---SSSW-----VHSAAHGIVSVATGPSIGL 76 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~------~~~---~~~~-----~~~~~~~~~~~~~~~~~~~ 76 (383)
..+|..|...|++|.|+|+|.+||||+++|.|.+|....- ++. ...| ..++...++-+++++ ++
T Consensus 58 ~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~--d~ 135 (434)
T KOG1009|consen 58 LSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSP--DS 135 (434)
T ss_pred eecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccC--CC
Confidence 4578899999999999999999999999999999986511 100 0000 011123456667777 46
Q ss_pred ceeEecccCCeEEEeecCCCC
Q 016769 77 NKVISQGRDGTVKCWDIENGG 97 (383)
Q Consensus 77 ~~l~s~~~D~ti~~Wd~~~~~ 97 (383)
..+++++.|+++++||+..|.
T Consensus 136 ~~l~s~s~dns~~l~Dv~~G~ 156 (434)
T KOG1009|consen 136 NFLVSGSVDNSVRLWDVHAGQ 156 (434)
T ss_pred ceeeeeeccceEEEEEeccce
Confidence 788999999999999998874
No 196
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.41 E-value=6.3e-11 Score=100.91 Aligned_cols=178 Identities=18% Similarity=0.241 Sum_probs=115.8
Q ss_pred ceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeecc
Q 016769 181 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH 260 (383)
Q Consensus 181 ~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h 260 (383)
+++.|||-...+++..+.....+ +..+ +.. .++++. -.+.|.+|.....-..+..+.--
T Consensus 75 NkviIWDD~k~~~i~el~f~~~I---------~~V~-----l~r------~riVvv-l~~~I~VytF~~n~k~l~~~et~ 133 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELSFNSEI---------KAVK-----LRR------DRIVVV-LENKIYVYTFPDNPKLLHVIETR 133 (346)
T ss_pred ceEEEEecccCcEEEEEEeccce---------eeEE-----EcC------CeEEEE-ecCeEEEEEcCCChhheeeeecc
Confidence 47999996666666665432211 1111 111 123322 36789999876332223322211
Q ss_pred ccCeEEEEEeCCC-CceEE--EEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCc-EEEEEc
Q 016769 261 LEPVLCLSIDESC-NGGIS--GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRR-VRIYNY 336 (383)
Q Consensus 261 ~~~v~~~~~~~~~-~~~~s--~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~-i~iwd~ 336 (383)
..|---++..+.. ..+++ |-.-|.|.|-||...... ....+..|.+.|.+++++-+|..+|++|..|| |||||.
T Consensus 134 ~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~--~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt 211 (346)
T KOG2111|consen 134 SNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPN--APSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDT 211 (346)
T ss_pred cCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcC--CceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEc
Confidence 1122122222221 22222 345588999998643221 12345678899999999999999999999996 799999
Q ss_pred CCCceEEEecc--cccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 337 RKGSALAILKY--HHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 337 ~~~~~~~~~~~--h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
.+|+.+..++. .+..|.+++||||..+||.+|+-|++++|.+.++
T Consensus 212 ~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 212 EDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred CCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecC
Confidence 99999887753 4567999999999999999999999999999764
No 197
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.39 E-value=9.8e-12 Score=101.99 Aligned_cols=145 Identities=19% Similarity=0.265 Sum_probs=110.0
Q ss_pred EEEEEeCCCcEEEEeCCC---------CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCe----eE
Q 016769 232 NVLAGYEDGSILVWDIRN---------PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGS----CV 298 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~----~~ 298 (383)
.+++|..+|+|.++.+++ ++.++-..++|..|+..+.|.. ..+++ +.||.|+=|..+....+ .+
T Consensus 24 ~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d--~~Lls-~gdG~V~gw~W~E~~es~~~K~l 100 (325)
T KOG0649|consen 24 YLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD--DFLLS-GGDGLVYGWEWNEEEESLATKRL 100 (325)
T ss_pred EEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh--hheee-ccCceEEEeeehhhhhhccchhh
Confidence 577899999999998853 1234455688999999999973 33455 45799998876543321 11
Q ss_pred Eee--ee---ecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcE
Q 016769 299 IKK--EI---NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTV 373 (383)
Q Consensus 299 ~~~--~~---~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i 373 (383)
+.. .+ ..+...|+++.+.|..+.++.++.|+.++-||+++|+....+++|...|.++.--.....+.||++||++
T Consensus 101 we~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtv 180 (325)
T KOG0649|consen 101 WEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTV 180 (325)
T ss_pred hhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccE
Confidence 111 11 1133568999999988878888899999999999999999999999999999984455578999999999
Q ss_pred EEEeCC
Q 016769 374 ALWELY 379 (383)
Q Consensus 374 ~~w~~~ 379 (383)
|+||..
T Consensus 181 RvWd~k 186 (325)
T KOG0649|consen 181 RVWDTK 186 (325)
T ss_pred EEEecc
Confidence 999975
No 198
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.36 E-value=1.7e-10 Score=109.53 Aligned_cols=147 Identities=20% Similarity=0.195 Sum_probs=98.8
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeee----ec-------cccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCee-EE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAM----KV-------HLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSC-VI 299 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~----~~-------h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~-~~ 299 (383)
+++++.||.|+.|+++.-..|.... .. -...+.++.|.+... .++.|+.+|.|..=+-...+... ..
T Consensus 308 f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~ 387 (555)
T KOG1587|consen 308 FFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVS 387 (555)
T ss_pred eEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCccccccc
Confidence 5666778888888765432221110 11 123567788855444 46788888887652222111111 00
Q ss_pred ---eeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcC-CCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEE
Q 016769 300 ---KKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR-KGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVA 374 (383)
Q Consensus 300 ---~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~ 374 (383)
......+.+.+..+.++|-+.-+...+.|.+++||... ...++..+..+...+.+++|||--. .++++..||+|.
T Consensus 388 ~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~ 467 (555)
T KOG1587|consen 388 YKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLD 467 (555)
T ss_pred ccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCcee
Confidence 11234566789999999987655555559999999998 6777877888888899999999766 788899999999
Q ss_pred EEeCC
Q 016769 375 LWELY 379 (383)
Q Consensus 375 ~w~~~ 379 (383)
+|||-
T Consensus 468 iWDLl 472 (555)
T KOG1587|consen 468 IWDLL 472 (555)
T ss_pred hhhhh
Confidence 99984
No 199
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.33 E-value=8.1e-09 Score=88.27 Aligned_cols=143 Identities=13% Similarity=0.282 Sum_probs=99.5
Q ss_pred cceEEEEecC-CCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC-ceeee
Q 016769 180 LSEVEIWDLN-TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI-PLTAM 257 (383)
Q Consensus 180 ~~~i~~Wdl~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~-~~~~~ 257 (383)
.+.|.+|... +.+++..+.- ..+.+++|... |..+ ....+.-|..-|+|.|-|+.+... +-..+
T Consensus 112 ~~~I~VytF~~n~k~l~~~et---------~~NPkGlC~~~----~~~~-k~~LafPg~k~GqvQi~dL~~~~~~~p~~I 177 (346)
T KOG2111|consen 112 ENKIYVYTFPDNPKLLHVIET---------RSNPKGLCSLC----PTSN-KSLLAFPGFKTGQVQIVDLASTKPNAPSII 177 (346)
T ss_pred cCeEEEEEcCCChhheeeeec---------ccCCCceEeec----CCCC-ceEEEcCCCccceEEEEEhhhcCcCCceEE
Confidence 3578999876 4444444431 11234566432 2211 111223477889999999986433 23568
Q ss_pred eccccCeEEEEEeCCCCceEEEEcCCc-EEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEc
Q 016769 258 KVHLEPVLCLSIDESCNGGISGGADQK-IVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336 (383)
Q Consensus 258 ~~h~~~v~~~~~~~~~~~~~s~~~d~~-i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~ 336 (383)
+.|...|.|++...+|..++++|..|+ |||||..+.+....+ .-......|.+++|+||..++|++|.-||++||.+
T Consensus 178 ~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~--RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l 255 (346)
T KOG2111|consen 178 NAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQEL--RRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSL 255 (346)
T ss_pred EcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeee--ecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEe
Confidence 899999999999999999999999998 699998765532222 11223356999999999999999999999999988
Q ss_pred CC
Q 016769 337 RK 338 (383)
Q Consensus 337 ~~ 338 (383)
+.
T Consensus 256 ~~ 257 (346)
T KOG2111|consen 256 RD 257 (346)
T ss_pred ec
Confidence 54
No 200
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.31 E-value=2.5e-10 Score=108.08 Aligned_cols=114 Identities=13% Similarity=0.070 Sum_probs=75.6
Q ss_pred eCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEEC
Q 016769 237 YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 316 (383)
Q Consensus 237 ~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~ 316 (383)
..++...||++.........+ .+.. ....+++++..++..+.++ +.+||+....... +... .......|+
T Consensus 311 ~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~-lt~~-----~~~~~~~~s 380 (429)
T PRK01742 311 DRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEV-LSST-----FLDESPSIS 380 (429)
T ss_pred CCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEE-ecCC-----CCCCCceEC
Confidence 345666777664322222222 2222 3467888988887776654 6668886543221 1111 123457799
Q ss_pred CCCcEEEEEeCCCcEEEEEc--CCCceEEEecccccceeEEEEeCC
Q 016769 317 PDSKIAATAGWDRRVRIYNY--RKGSALAILKYHHATCNAVSFSSD 360 (383)
Q Consensus 317 p~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~v~~spd 360 (383)
||+++|+.++.++.+++|++ .+++....+..|...+...+|||-
T Consensus 381 PdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 381 PNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred CCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence 99999999999999999887 357778888888888999999984
No 201
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.31 E-value=5.9e-11 Score=109.53 Aligned_cols=139 Identities=19% Similarity=0.226 Sum_probs=106.6
Q ss_pred CceEEEEEeCCCcEEEEeCCCCC------CceeeeeccccCeEEEEEeCCC-CceEEEEcCCcEEEEEccCCCCeeEEee
Q 016769 229 GFVNVLAGYEDGSILVWDIRNPG------IPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKK 301 (383)
Q Consensus 229 ~~~~~~sg~~dg~i~~wdl~~~~------~~~~~~~~h~~~v~~~~~~~~~-~~~~s~~~d~~i~~wdl~~~~~~~~~~~ 301 (383)
+..+++.+++||.|++|.+...+ .+-..++.|.+.|..+.|+|-. +.+++++.|-+|++||+......+
T Consensus 639 D~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~---- 714 (1012)
T KOG1445|consen 639 DDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYS---- 714 (1012)
T ss_pred ChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhh----
Confidence 34468889999999999986543 2445678999999999998854 467889999999999998655433
Q ss_pred eeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceE-EEeccc-ccceeEEEEeCCCCEEEEEeCCC
Q 016769 302 EINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL-AILKYH-HATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 302 ~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~h-~~~v~~v~~spd~~~las~s~d~ 371 (383)
.+..|...|.+++|+|||+.+|+.+.||+|++|+-++++.. +.=.+- ...-..|-|.-||++++..+.|.
T Consensus 715 ~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk 786 (1012)
T KOG1445|consen 715 RLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDK 786 (1012)
T ss_pred eeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccc
Confidence 34567789999999999999999999999999999876542 111111 11234566888999988887775
No 202
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.31 E-value=1.8e-11 Score=110.83 Aligned_cols=149 Identities=20% Similarity=0.319 Sum_probs=109.5
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeee--e--ccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCC------------
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAM--K--VHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHST------------ 294 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~--~--~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~------------ 294 (383)
-+++|..-|.|.+.|..... ..+.+ . .....|+|+.|-+... .++.+-.+|.+.+||.+..-
T Consensus 187 dllIGf~tGqvq~idp~~~~-~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~ 265 (636)
T KOG2394|consen 187 DLLIGFTTGQVQLIDPINFE-VSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKD 265 (636)
T ss_pred ceEEeeccCceEEecchhhH-HHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCC
Confidence 47789999999999876421 11111 1 1235789999955444 45566678999999753110
Q ss_pred -CeeEEe-----------eeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC
Q 016769 295 -GSCVIK-----------KEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK 362 (383)
Q Consensus 295 -~~~~~~-----------~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~ 362 (383)
....+. ..+....+.|+.++|+|||++||+.+.||.+||||.++.+.+..++.+-+...||+||||||
T Consensus 266 ~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGK 345 (636)
T KOG2394|consen 266 GDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGK 345 (636)
T ss_pred CCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCcc
Confidence 000000 01112335688999999999999999999999999999998888888889999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCC
Q 016769 363 LMASASEDSTVALWELYPP 381 (383)
Q Consensus 363 ~las~s~d~~i~~w~~~~~ 381 (383)
++++|++|--|.||.+.+.
T Consensus 346 yIvtGGEDDLVtVwSf~er 364 (636)
T KOG2394|consen 346 YIVTGGEDDLVTVWSFEER 364 (636)
T ss_pred EEEecCCcceEEEEEeccc
Confidence 9999999999999998653
No 203
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.30 E-value=2.6e-11 Score=109.87 Aligned_cols=123 Identities=15% Similarity=0.176 Sum_probs=95.8
Q ss_pred EEEEEeCCCcEEEEeCCCC---------------------------CCceeeeeccccCeEEEEEeCCCCceEEEEcCCc
Q 016769 232 NVLAGYEDGSILVWDIRNP---------------------------GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQK 284 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~---------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~ 284 (383)
.++.+..+|.+.++|..-. ..|+.....-..+|..++|++++..+++.+.||.
T Consensus 234 ~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGf 313 (636)
T KOG2394|consen 234 LFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGF 313 (636)
T ss_pred eEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCce
Confidence 4667888999999975310 0111112222346778889999999999999999
Q ss_pred EEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEe
Q 016769 285 IVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFS 358 (383)
Q Consensus 285 i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~s 358 (383)
+||+|++...-. ..++.--++..|++|+|||+||++|+.|.-|.||.+...+.+..=++|..+|..|+|.
T Consensus 314 LRvF~fdt~eLl----g~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 314 LRIFDFDTQELL----GVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred EEEeeccHHHHH----HHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence 999998754321 1222233678999999999999999999999999999999999889999999999997
No 204
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.29 E-value=7.2e-10 Score=109.58 Aligned_cols=147 Identities=17% Similarity=0.250 Sum_probs=96.4
Q ss_pred EEEEEeCCCcEEEEeCCCCCCc-eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 232 NVLAGYEDGSILVWDIRNPGIP-LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
.++.+..-+.|..||+++.... ....+...+.|.++.+|+.+..++.|...|.+.+||++.....+.+... ....+
T Consensus 1165 ~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P---~~~~i 1241 (1431)
T KOG1240|consen 1165 VLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHP---ARAPI 1241 (1431)
T ss_pred eEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCc---ccCCc
Confidence 4667888999999999874321 1112222368999999999999999999999999999865433332211 12345
Q ss_pred EEEEECCC---CcEEEEEe--CCCcEEEEEcCCCceEEEeccc--------c-----------cceeEEEEeCCCCEEEE
Q 016769 311 SGTSIRPD---SKIAATAG--WDRRVRIYNYRKGSALAILKYH--------H-----------ATCNAVSFSSDCKLMAS 366 (383)
Q Consensus 311 ~~~~~~p~---~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~h--------~-----------~~v~~v~~spd~~~las 366 (383)
..+..+|- ....++++ ..+.|.+|++.+|....++..- . .......+.--+..+.+
T Consensus 1242 ~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~lt 1321 (1431)
T KOG1240|consen 1242 RHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLT 1321 (1431)
T ss_pred ceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeee
Confidence 55555543 34444444 5889999999988655444222 1 11122233223458899
Q ss_pred EeCCCcEEEEeCCCC
Q 016769 367 ASEDSTVALWELYPP 381 (383)
Q Consensus 367 ~s~d~~i~~w~~~~~ 381 (383)
|+.|+.|+.||..-|
T Consensus 1322 ggsd~kIR~wD~~~p 1336 (1431)
T KOG1240|consen 1322 GGSDMKIRKWDPTRP 1336 (1431)
T ss_pred cCCccceeeccCCCc
Confidence 999999999998655
No 205
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.27 E-value=1.7e-10 Score=97.12 Aligned_cols=141 Identities=21% Similarity=0.251 Sum_probs=103.1
Q ss_pred EEEeCCCcEEEEeCCCCCCceeeee-----ccccCeEEEEEeC--CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecC
Q 016769 234 LAGYEDGSILVWDIRNPGIPLTAMK-----VHLEPVLCLSIDE--SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE 306 (383)
Q Consensus 234 ~sg~~dg~i~~wdl~~~~~~~~~~~-----~h~~~v~~~~~~~--~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~ 306 (383)
+++-.|..|.+|++.........+. .|.....+-.|+| ++..++ ...|+++..||++....... .-..|
T Consensus 138 lasm~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~-tt~d~tl~~~D~RT~~~~~s---I~dAH 213 (370)
T KOG1007|consen 138 LASMDDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVA-TTSDSTLQFWDLRTMKKNNS---IEDAH 213 (370)
T ss_pred eEEeccCceEEEEcccCcchheeecccccccccceecccccCCCCccceEE-EeCCCcEEEEEccchhhhcc---hhhhh
Confidence 3455699999999987544233222 2333444555655 444444 45789999999985432221 22345
Q ss_pred CCCeEEEEECCCCc-EEEEEeCCCcEEEEEcCC-CceEEEecccccceeEEEEeCCC-CEEEEEeCCCcEEEEeC
Q 016769 307 RPGISGTSIRPDSK-IAATAGWDRRVRIYNYRK-GSALAILKYHHATCNAVSFSSDC-KLMASASEDSTVALWEL 378 (383)
Q Consensus 307 ~~~i~~~~~~p~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~v~~spd~-~~las~s~d~~i~~w~~ 378 (383)
...+..+.|+|+-+ +|++++.||.|+|||.+. ..++..+.+|...|++|.|+|.- +++.|||.|..|.+|..
T Consensus 214 gq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca 288 (370)
T KOG1007|consen 214 GQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCA 288 (370)
T ss_pred cceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEec
Confidence 56789999999976 688999999999999975 45678889999999999999965 48889999999999975
No 206
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.26 E-value=6.6e-10 Score=105.28 Aligned_cols=188 Identities=16% Similarity=0.164 Sum_probs=114.9
Q ss_pred ccCCCCCceeeeccC-CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcE
Q 016769 164 DVPAEGPKYMAVAGE-QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 242 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~-~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i 242 (383)
.++++|++++.++.. .+..|++||+++++............. ..+.|+. ...+++...+|.+
T Consensus 210 ~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~--------------~~wSPDG---~~La~~~~~~g~~ 272 (429)
T PRK01742 210 AWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGA--------------PAFSPDG---SRLAFASSKDGVL 272 (429)
T ss_pred eEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCc--------------eeECCCC---CEEEEEEecCCcE
Confidence 345677654443322 234799999988763211111000001 1244432 2223334568876
Q ss_pred EEE--eCCCCCCceeeeeccccCeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC
Q 016769 243 LVW--DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319 (383)
Q Consensus 243 ~~w--dl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 319 (383)
.|| |+... ....+..+...+....|++++..++.. ..++...+|+++........ .. .. . ....|+|||
T Consensus 273 ~Iy~~d~~~~--~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~---l~-~~-~-~~~~~SpDG 344 (429)
T PRK01742 273 NIYVMGANGG--TPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASL---VG-GR-G-YSAQISADG 344 (429)
T ss_pred EEEEEECCCC--CeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEE---ec-CC-C-CCccCCCCC
Confidence 666 55432 234455566667788999999876644 45788899988654432221 11 11 1 346799999
Q ss_pred cEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 320 KIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 320 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++|+.++.++ +.+||+.+++.......+ ...+++|+|||++|++++.++.+++|.+.
T Consensus 345 ~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~ 401 (429)
T PRK01742 345 KTLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLV 401 (429)
T ss_pred CEEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEE
Confidence 9998888765 556999888754322222 23567899999999999999999988764
No 207
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.26 E-value=3e-11 Score=114.66 Aligned_cols=250 Identities=16% Similarity=0.213 Sum_probs=160.9
Q ss_pred CCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCC
Q 016769 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (383)
Q Consensus 7 ~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ 86 (383)
.....+.++||.+.|+.++.+.+...++++|.|..||||.+..+..+..+.+|. +.+.+++|+|. .+.+.||
T Consensus 221 t~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrght--gavtaiafsP~------~sss~dg 292 (1113)
T KOG0644|consen 221 TARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHT--GAVTAIAFSPR------ASSSDDG 292 (1113)
T ss_pred chhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccc--cceeeeccCcc------ccCCCCC
Confidence 344567889999999999999999999999999999999999988888887776 45899999993 3889999
Q ss_pred eEEEeecC-CCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 87 TVKCWDIE-NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 87 ti~~Wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
|+++||.. ... ...| .+... ..+.. +. +..+
T Consensus 293 t~~~wd~r~~~~-~y~p------------------rp~~~-------------~~~~~---------------~~-s~~~ 324 (1113)
T KOG0644|consen 293 TCRIWDARLEPR-IYVP------------------RPLKF-------------TEKDL---------------VD-SILF 324 (1113)
T ss_pred ceEecccccccc-ccCC------------------CCCCc-------------ccccc---------------ee-eeec
Confidence 99999985 110 0000 00000 00000 00 0000
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 245 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w 245 (383)
-..+. -..+|+.+++.+.|.+.....- ...+.+ ..+.. .....++++-.+-.+++|
T Consensus 325 ~~~~~--~f~Tgs~d~ea~n~e~~~l~~~-----------------~~~lif--~t~ss---d~~~~~~~ar~~~~~~vw 380 (1113)
T KOG0644|consen 325 ENNGD--RFLTGSRDGEARNHEFEQLAWR-----------------SNLLIF--VTRSS---DLSSIVVTARNDHRLCVW 380 (1113)
T ss_pred ccccc--ccccccCCcccccchhhHhhhh-----------------ccceEE--Eeccc---cccccceeeeeeeEeeee
Confidence 01111 1234556666666654331110 000000 00000 000124556667788999
Q ss_pred eCCCCCCceeeeeccccCeEEEEEeCCCCce-EEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEE
Q 016769 246 DIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 324 (383)
Q Consensus 246 dl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s 324 (383)
++.. +...+.+.+|.+++..+.++|-.... ++++.||...|||+-.... ...+. .. .+.+..-.|++||..++.
T Consensus 381 nl~~-g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~p--ik~y~-~g-h~kl~d~kFSqdgts~~l 455 (1113)
T KOG0644|consen 381 NLYT-GQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIP--IKHYF-IG-HGKLVDGKFSQDGTSIAL 455 (1113)
T ss_pred eccc-chhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCc--ceeee-cc-cceeeccccCCCCceEec
Confidence 9877 44467778899999999998876543 7899999999999975432 22222 11 345677789999999998
Q ss_pred EeCCCcEEEEEcCCCce
Q 016769 325 AGWDRRVRIYNYRKGSA 341 (383)
Q Consensus 325 ~~~dg~i~iwd~~~~~~ 341 (383)
...=|.++|+....++.
T Consensus 456 sd~hgql~i~g~gqs~s 472 (1113)
T KOG0644|consen 456 SDDHGQLYILGTGQSKS 472 (1113)
T ss_pred CCCCCceEEeccCCCcc
Confidence 88888999887755443
No 208
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.23 E-value=6e-10 Score=97.47 Aligned_cols=143 Identities=17% Similarity=0.244 Sum_probs=111.1
Q ss_pred EEEEeCC--CcEEEEeCCCCCCceeeeec-cc------cC--eEEEEEeCC--CCceEEEEcCCcEEEEEccCCCCeeEE
Q 016769 233 VLAGYED--GSILVWDIRNPGIPLTAMKV-HL------EP--VLCLSIDES--CNGGISGGADQKIVLYNLDHSTGSCVI 299 (383)
Q Consensus 233 ~~sg~~d--g~i~~wdl~~~~~~~~~~~~-h~------~~--v~~~~~~~~--~~~~~s~~~d~~i~~wdl~~~~~~~~~ 299 (383)
+++|+.. ..+++||++.... +-..+. .+ -| +..+.|-+. ...++++..-+.+++||...+..+. .
T Consensus 164 va~GGke~~n~lkiwdle~~~q-iw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV-~ 241 (412)
T KOG3881|consen 164 VATGGKENINELKIWDLEQSKQ-IWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPV-A 241 (412)
T ss_pred EecCchhcccceeeeeccccee-eeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcce-e
Confidence 4558888 8899999987522 111111 11 12 344556333 4568999999999999988544332 2
Q ss_pred eeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEE-ecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 300 KKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAI-LKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 300 ~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
........++++...|++++|++|..-+.+..||++.++.+.. +++-.+.|.+|-.+|.+++||++|-|..|||+|+
T Consensus 242 --~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ 319 (412)
T KOG3881|consen 242 --QFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDI 319 (412)
T ss_pred --EeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeec
Confidence 2344567899999999999999999999999999999998876 8889999999999999999999999999999998
Q ss_pred C
Q 016769 379 Y 379 (383)
Q Consensus 379 ~ 379 (383)
-
T Consensus 320 k 320 (412)
T KOG3881|consen 320 K 320 (412)
T ss_pred c
Confidence 4
No 209
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.23 E-value=6.7e-10 Score=103.31 Aligned_cols=232 Identities=17% Similarity=0.266 Sum_probs=152.2
Q ss_pred ceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCC
Q 016769 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLS 99 (383)
Q Consensus 20 ~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~ 99 (383)
.|+.+||-|||+.|+-+ ++..+.++|+..+..+..++.|.. -+.+++++. +|.+++||+.|..|-+|+-.-...
T Consensus 14 ci~d~afkPDGsqL~lA-Ag~rlliyD~ndG~llqtLKgHKD--tVycVAys~--dGkrFASG~aDK~VI~W~~klEG~- 87 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILA-AGSRLLVYDTSDGTLLQPLKGHKD--TVYCVAYAK--DGKRFASGSADKSVIIWTSKLEGI- 87 (1081)
T ss_pred chheeEECCCCceEEEe-cCCEEEEEeCCCcccccccccccc--eEEEEEEcc--CCceeccCCCceeEEEecccccce-
Confidence 89999999999988764 455789999999999999888764 477888887 579999999999999998531100
Q ss_pred CCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCC
Q 016769 100 SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQ 179 (383)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 179 (383)
+ +|
T Consensus 88 ------L----------------------------------------------------------------kY------- 90 (1081)
T KOG1538|consen 88 ------L----------------------------------------------------------------KY------- 90 (1081)
T ss_pred ------e----------------------------------------------------------------ee-------
Confidence 0 00
Q ss_pred cceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeec
Q 016769 180 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV 259 (383)
Q Consensus 180 ~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~ 259 (383)
++.+.+.||.+ .|.+. .+++|+- ...-+|....... ... .
T Consensus 91 -----------------------------SH~D~IQCMsF---NP~~h----~LasCsL-sdFglWS~~qK~V--~K~-k 130 (1081)
T KOG1538|consen 91 -----------------------------SHNDAIQCMSF---NPITH----QLASCSL-SDFGLWSPEQKSV--SKH-K 130 (1081)
T ss_pred -----------------------------ccCCeeeEeec---CchHH----Hhhhcch-hhccccChhhhhH--Hhh-h
Confidence 00001111111 11100 1222221 1233454332110 000 0
Q ss_pred cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC-----cEEEEEeCCCcEEEE
Q 016769 260 HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-----KIAATAGWDRRVRIY 334 (383)
Q Consensus 260 h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-----~~l~s~~~dg~i~iw 334 (383)
....+.+.+|..+|.+++.|-.+|+|.+-+-.... +..+ .......+.|.+++|+|.. ..++...|..++..+
T Consensus 131 ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEe-k~~I-~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy 208 (1081)
T KOG1538|consen 131 SSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEE-KVKI-ERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFY 208 (1081)
T ss_pred hheeEEEeeecCCCcEEEEeccCceEEeecCCCCc-ceEE-eCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEE
Confidence 12356788899999999999999999887643222 2222 1222344679999999864 368888999999888
Q ss_pred EcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 335 NYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 335 d~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
.+ +|+.+..-+.-.-...|+.+.|+|.++..|+.|+.+++|-
T Consensus 209 ~L-sG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT 250 (1081)
T KOG1538|consen 209 QL-SGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT 250 (1081)
T ss_pred Ee-cceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe
Confidence 77 5666654444455678889999999999999999999873
No 210
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.22 E-value=3.2e-09 Score=97.70 Aligned_cols=143 Identities=21% Similarity=0.294 Sum_probs=112.9
Q ss_pred ceEEEEEeCCCcEEEEeCCCCCCceeee-eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 230 FVNVLAGYEDGSILVWDIRNPGIPLTAM-KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 230 ~~~~~sg~~dg~i~~wdl~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
...++-|...|.|.+|+...+....... ..|.++|.++........+.+++.|..+..|+.......+. .+....
T Consensus 70 t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~----~~~~~~ 145 (541)
T KOG4547|consen 70 TSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRI----WKEQKP 145 (541)
T ss_pred ceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeee----eccCCC
Confidence 3456679999999999988754322222 46899999998877777789999999999998865433332 233345
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCC-----CC-EEEEEeCCCcEEEEeC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSD-----CK-LMASASEDSTVALWEL 378 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd-----~~-~las~s~d~~i~~w~~ 378 (383)
.+.+++++||++.+++| .+.|++||+++++.+.++.||..+|.+++|--+ |+ .|.++..+..|.+|-+
T Consensus 146 ~~~sl~is~D~~~l~~a--s~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v 219 (541)
T KOG4547|consen 146 LVSSLCISPDGKILLTA--SRQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVV 219 (541)
T ss_pred ccceEEEcCCCCEEEec--cceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEE
Confidence 68899999999999877 567999999999999999999999999999876 55 5666777888888865
No 211
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.21 E-value=9e-11 Score=104.65 Aligned_cols=264 Identities=16% Similarity=0.202 Sum_probs=164.4
Q ss_pred eeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCC
Q 016769 22 TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN 101 (383)
Q Consensus 22 ~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~ 101 (383)
+.+.|+.+|+.|+-|+.-|+|-..|..+.+....+.+-. .+..+.|-. ...++.......+.++|-+.-+
T Consensus 133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~E---tv~Dv~~LH---neq~~AVAQK~y~yvYD~~GtE---- 202 (545)
T KOG1272|consen 133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVME---TVRDVTFLH---NEQFFAVAQKKYVYVYDNNGTE---- 202 (545)
T ss_pred eeeeecCCccEEEecCCccceeeeecccceeeeeeehhh---hhhhhhhhc---chHHHHhhhhceEEEecCCCcE----
Confidence 458899999999999999999999998876554443221 222333332 3556777777888898854321
Q ss_pred CeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcc
Q 016769 102 PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLS 181 (383)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 181 (383)
..+++.... +... .+-+ . .||+++++..|
T Consensus 203 -lHClk~~~~-----------------------v~rL-------------------------eFLP-y-HfLL~~~~~~G 231 (545)
T KOG1272|consen 203 -LHCLKRHIR-----------------------VARL-------------------------EFLP-Y-HFLLVAASEAG 231 (545)
T ss_pred -EeehhhcCc-----------------------hhhh-------------------------cccc-h-hheeeecccCC
Confidence 122211000 0000 0000 0 36777788889
Q ss_pred eEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccc
Q 016769 182 EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL 261 (383)
Q Consensus 182 ~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~ 261 (383)
-++.-|+.+++.+..+.- ..+...+|... |- ...+-.|...|+|-+|...+ ..|+..+-.|.
T Consensus 232 ~L~Y~DVS~GklVa~~~t----------~~G~~~vm~qN---P~----NaVih~GhsnGtVSlWSP~s-kePLvKiLcH~ 293 (545)
T KOG1272|consen 232 FLKYQDVSTGKLVASIRT----------GAGRTDVMKQN---PY----NAVIHLGHSNGTVSLWSPNS-KEPLVKILCHR 293 (545)
T ss_pred ceEEEeechhhhhHHHHc----------cCCccchhhcC---Cc----cceEEEcCCCceEEecCCCC-cchHHHHHhcC
Confidence 999999999987665531 11222222221 11 12345799999999999876 56777788899
Q ss_pred cCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEE-cCC--
Q 016769 262 EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN-YRK-- 338 (383)
Q Consensus 262 ~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd-~~~-- 338 (383)
.+|.++++++.|.+.++.|.|..++||||+........ .. ......++||.-| .|| .++...+.||- ...
T Consensus 294 g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~----~t-p~~a~~ls~Sqkg-lLA-~~~G~~v~iw~d~~~~s 366 (545)
T KOG1272|consen 294 GPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTY----RT-PHPASNLSLSQKG-LLA-LSYGDHVQIWKDALKGS 366 (545)
T ss_pred CCcceEEECCCCcEEeecccccceeEeeecccccccee----ec-CCCcccccccccc-cee-eecCCeeeeehhhhcCC
Confidence 99999999999999999999999999999754311111 11 1345667777444 444 45666799994 332
Q ss_pred CceEEEeccc--ccceeEEEEeCCCCEEEEEeCCC
Q 016769 339 GSALAILKYH--HATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 339 ~~~~~~~~~h--~~~v~~v~~spd~~~las~s~d~ 371 (383)
+.....+-.| ...|..+.|.|-...|-.|-..|
T Consensus 367 ~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G 401 (545)
T KOG1272|consen 367 GHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGG 401 (545)
T ss_pred CCCCcchhhhccCcccccceeccHHHeeeccccCC
Confidence 1222223233 24788889988544444443333
No 212
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.19 E-value=8.3e-11 Score=106.91 Aligned_cols=126 Identities=16% Similarity=0.265 Sum_probs=103.5
Q ss_pred eeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC--CCcEEEEEeCCCcEE
Q 016769 255 TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP--DSKIAATAGWDRRVR 332 (383)
Q Consensus 255 ~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p--~~~~l~s~~~dg~i~ 332 (383)
..+++|++.|+|+.|..+|..|++|+.|.++.|||.-.... +...-..|...|.++.|-| +.+.+++|..|+.|+
T Consensus 44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~Kl---lhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKL---LHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred hhhccccceecceeecCCCCEEeecCCcceEEeecchhcce---eeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence 35789999999999999999999999999999998753221 1112345667799999977 457899999999999
Q ss_pred EEEcCCC----------ceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCCCCCC
Q 016769 333 IYNYRKG----------SALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELYPPHA 383 (383)
Q Consensus 333 iwd~~~~----------~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~~~~~ 383 (383)
+||+.+. .+...+..|...|..++-.|++. .+-++|+||+|+=+|+..||.
T Consensus 121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~ 182 (758)
T KOG1310|consen 121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHV 182 (758)
T ss_pred EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCcc
Confidence 9999752 33456778999999999999994 788999999999999998873
No 213
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.17 E-value=1.5e-09 Score=92.66 Aligned_cols=149 Identities=17% Similarity=0.241 Sum_probs=117.9
Q ss_pred EEEEEeCCCcEEEEeCCCCCC--ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee-eecCCC
Q 016769 232 NVLAGYEDGSILVWDIRNPGI--PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE-INLERP 308 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~-~~~~~~ 308 (383)
++++|+.|..-.+|...+++. +...+..++....++.|+|..+.+++|+....|.+|.++..+. .-..++ .+...+
T Consensus 69 rIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENd-WWVsKhikkPirS 147 (361)
T KOG1523|consen 69 RIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQEND-WWVSKHIKKPIRS 147 (361)
T ss_pred ceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccc-eehhhhhCCcccc
Confidence 589999999999998855442 4456677899999999999999999999999999998875432 211222 233456
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEc-----CC-------------CceEEEecccccceeEEEEeCCCCEEEEEeCC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNY-----RK-------------GSALAILKYHHATCNAVSFSSDCKLMASASED 370 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~-----~~-------------~~~~~~~~~h~~~v~~v~~spd~~~las~s~d 370 (383)
.|.+++++|++-.+++|+.|++.|+|.. +. |..+..+....+.+..+.|+|+|..||-.+.|
T Consensus 148 tv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hd 227 (361)
T KOG1523|consen 148 TVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHD 227 (361)
T ss_pred ceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCC
Confidence 7999999999999999999999999965 11 22233444566789999999999999999999
Q ss_pred CcEEEEeCCCC
Q 016769 371 STVALWELYPP 381 (383)
Q Consensus 371 ~~i~~w~~~~~ 381 (383)
.+|.+=|..-|
T Consensus 228 s~v~~~da~~p 238 (361)
T KOG1523|consen 228 STVSFVDAAGP 238 (361)
T ss_pred CceEEeecCCC
Confidence 99999887644
No 214
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.16 E-value=1.6e-09 Score=105.48 Aligned_cols=180 Identities=16% Similarity=0.204 Sum_probs=134.5
Q ss_pred CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeee
Q 016769 179 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK 258 (383)
Q Consensus 179 ~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~ 258 (383)
.++.+-+||......+..++.+.. ....++....+.+ ...++.+|+.-+.|.+|+......+. .+.
T Consensus 107 ~~ns~~i~d~~~~~~~~~i~~~er---------~~l~~~~~~g~s~----~~~~i~~gsv~~~iivW~~~~dn~p~-~l~ 172 (967)
T KOG0974|consen 107 SRNSLLIRDSKNSSVLSKIQSDER---------CTLYSSLIIGDSA----EELYIASGSVFGEIIVWKPHEDNKPI-RLK 172 (967)
T ss_pred cCceEEEEecccCceehhcCCCce---------EEEEeEEEEeccC----cEEEEEeccccccEEEEeccccCCcc-eec
Confidence 356899999877665555543211 0111122212222 23467889999999999987444443 478
Q ss_pred ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC
Q 016769 259 VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 259 ~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~ 338 (383)
+|.+.+..+.++.++.++++.+.|.++++|++++..... ...-.|..++..+.|.|+ .+++++.|-+.++|+.+
T Consensus 173 GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~---~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~- 246 (967)
T KOG0974|consen 173 GHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG---CTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN- 246 (967)
T ss_pred ccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC---cccccccceeEEEEeccc--eeEEeccceEEEEEecc-
Confidence 999999999999999999999999999999998654221 122346678999999998 89999999999999764
Q ss_pred CceEEEeccccc-ceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 339 GSALAILKYHHA-TCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 339 ~~~~~~~~~h~~-~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
++.+..+..|.. -++.++..++...++|++.|+.+++|++
T Consensus 247 ~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l 287 (967)
T KOG0974|consen 247 GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDL 287 (967)
T ss_pred cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhh
Confidence 555667888875 4899999888889999999999999987
No 215
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.14 E-value=7.1e-10 Score=100.69 Aligned_cols=140 Identities=15% Similarity=0.243 Sum_probs=110.6
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.++.++.||.+.+-+- + +..-..+..|..++.+-.|+++|..+++.|.||.|++|.-. .+++..+-.....|.
T Consensus 77 ~~~i~s~DGkf~il~k-~-~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrs-----GMLRStl~Q~~~~v~ 149 (737)
T KOG1524|consen 77 TLLICSNDGRFVILNK-S-ARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRS-----GMLRSTVVQNEESIR 149 (737)
T ss_pred eEEEEcCCceEEEecc-c-chhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEecc-----chHHHHHhhcCceeE
Confidence 4677899999888762 2 33334567899999999999999999999999999999632 233333333445799
Q ss_pred EEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 312 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
|+++.|+.+.++ -+..+-+.|=-+.-...+..+++|.+-|.++.|+|...+++||++|..-++||-+
T Consensus 150 c~~W~p~S~~vl-~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~ 216 (737)
T KOG1524|consen 150 CARWAPNSNSIV-FCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ 216 (737)
T ss_pred EEEECCCCCceE-EecCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc
Confidence 999999987544 3456667776776666677899999999999999999999999999999999964
No 216
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.14 E-value=1.7e-07 Score=86.49 Aligned_cols=280 Identities=18% Similarity=0.151 Sum_probs=148.7
Q ss_pred EEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCcee
Q 016769 33 LFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYH 112 (383)
Q Consensus 33 L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~ 112 (383)
+++-..++.|.|.|..+.+.+..+..... ....+.+++ +++++..++.|+.|.++|+.+.+... .++.+..
T Consensus 9 ~V~~~~~~~v~viD~~t~~~~~~i~~~~~--~h~~~~~s~--Dgr~~yv~~rdg~vsviD~~~~~~v~----~i~~G~~- 79 (369)
T PF02239_consen 9 YVVERGSGSVAVIDGATNKVVARIPTGGA--PHAGLKFSP--DGRYLYVANRDGTVSVIDLATGKVVA----TIKVGGN- 79 (369)
T ss_dssp EEEEGGGTEEEEEETTT-SEEEEEE-STT--EEEEEE-TT---SSEEEEEETTSEEEEEETTSSSEEE----EEE-SSE-
T ss_pred EEEecCCCEEEEEECCCCeEEEEEcCCCC--ceeEEEecC--CCCEEEEEcCCCeEEEEECCcccEEE----EEecCCC-
Confidence 45677889999999988776665543222 133455676 46788888899999999998764211 1111000
Q ss_pred eeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCC
Q 016769 113 FCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAE 192 (383)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~ 192 (383)
....+++++| ++++++....+.+.++|.++.+
T Consensus 80 -----------------------------------------------~~~i~~s~DG-~~~~v~n~~~~~v~v~D~~tle 111 (369)
T PF02239_consen 80 -----------------------------------------------PRGIAVSPDG-KYVYVANYEPGTVSVIDAETLE 111 (369)
T ss_dssp -----------------------------------------------EEEEEE--TT-TEEEEEEEETTEEEEEETTT--
T ss_pred -----------------------------------------------cceEEEcCCC-CEEEEEecCCCceeEecccccc
Confidence 0011233455 4677776677899999999998
Q ss_pred eeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCC
Q 016769 193 RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDES 272 (383)
Q Consensus 193 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~ 272 (383)
.+..+.-....... ...+. .++.. .+. ...++++--+-+.|.+-|.............-........++++
T Consensus 112 ~v~~I~~~~~~~~~---~~~Rv--~aIv~-s~~---~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpd 182 (369)
T PF02239_consen 112 PVKTIPTGGMPVDG---PESRV--AAIVA-SPG---RPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPD 182 (369)
T ss_dssp EEEEEE--EE-TTT---S---E--EEEEE--SS---SSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TT
T ss_pred ceeecccccccccc---cCCCc--eeEEe-cCC---CCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcc
Confidence 88776532211100 11111 12211 111 11234444445777777876643322222112334556788999
Q ss_pred CCceEEE-EcCCcEEEEEccCCCCeeEEe---------------------------------------------------
Q 016769 273 CNGGISG-GADQKIVLYNLDHSTGSCVIK--------------------------------------------------- 300 (383)
Q Consensus 273 ~~~~~s~-~~d~~i~~wdl~~~~~~~~~~--------------------------------------------------- 300 (383)
+++++.+ ..++.|.++|.........+.
T Consensus 183 gry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv 262 (369)
T PF02239_consen 183 GRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVV 262 (369)
T ss_dssp SSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEE
T ss_pred cceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEE
Confidence 9887664 345667777765332111000
Q ss_pred eeeecCCCCeEEEEECCCCcEEEEE----eCCCcEEEEEcCCCceEEEecccc-cceeEEEEeCCCCEE-EEEeCCC-cE
Q 016769 301 KEINLERPGISGTSIRPDSKIAATA----GWDRRVRIYNYRKGSALAILKYHH-ATCNAVSFSSDCKLM-ASASEDS-TV 373 (383)
Q Consensus 301 ~~~~~~~~~i~~~~~~p~~~~l~s~----~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~v~~spd~~~l-as~s~d~-~i 373 (383)
+.++....+ --+..||+++++... ...++|.++|.++.+...++.... ..+..+.|++||+.+ +|.-.++ .|
T Consensus 263 ~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i 341 (369)
T PF02239_consen 263 KTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAI 341 (369)
T ss_dssp EEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEE
T ss_pred EEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEE
Confidence 001111111 234568999999887 456899999999998877775322 358899999999943 3433333 79
Q ss_pred EEEeCC
Q 016769 374 ALWELY 379 (383)
Q Consensus 374 ~~w~~~ 379 (383)
.+||..
T Consensus 342 ~v~D~~ 347 (369)
T PF02239_consen 342 VVYDAK 347 (369)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999874
No 217
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.12 E-value=4.5e-09 Score=95.59 Aligned_cols=129 Identities=21% Similarity=0.254 Sum_probs=94.5
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
+++.++||.|++|. ++ +-...++....++|.|+.|+|+...++-+ ..+.+.+=.|..... . -..+.|.+-|-+
T Consensus 119 Llt~GEDG~iKiWS-rs-GMLRStl~Q~~~~v~c~~W~p~S~~vl~c-~g~h~~IKpL~~n~k-~---i~WkAHDGiiL~ 191 (737)
T KOG1524|consen 119 LLTAGEDGVIKIWS-RS-GMLRSTVVQNEESIRCARWAPNSNSIVFC-QGGHISIKPLAANSK-I---IRWRAHDGLVLS 191 (737)
T ss_pred eeeecCCceEEEEe-cc-chHHHHHhhcCceeEEEEECCCCCceEEe-cCCeEEEeecccccc-e---eEEeccCcEEEE
Confidence 77889999999997 33 22223344456799999999987765544 445565555543221 1 134567788999
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED 370 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d 370 (383)
+.++|....+++|+.|-+.++||.. |..+.+-..|+-+|.+|+|+|| +.++.+|.+
T Consensus 192 ~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~n 247 (737)
T KOG1524|consen 192 LSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE-KDYLLWSYN 247 (737)
T ss_pred eecCccccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccc-cceeeeeee
Confidence 9999999999999999999999984 6666666778888888888888 666666654
No 218
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.12 E-value=2.1e-08 Score=92.41 Aligned_cols=311 Identities=14% Similarity=0.130 Sum_probs=149.8
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEe-cccCCe
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVIS-QGRDGT 87 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-~~~D~t 87 (383)
+.+.++......-..++|+|||++++..+.||.|.++|+.+.+.+..+.... ....+++++ ++++++. ...+++
T Consensus 27 ~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~---~~~~i~~s~--DG~~~~v~n~~~~~ 101 (369)
T PF02239_consen 27 KVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG---NPRGIAVSP--DGKYVYVANYEPGT 101 (369)
T ss_dssp SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS---EEEEEEE----TTTEEEEEEEETTE
T ss_pred eEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC---CcceEEEcC--CCCEEEEEecCCCc
Confidence 4556666544444557899999999999999999999999888776654432 345667776 4677765 458899
Q ss_pred EEEeecCCCCCCCCCeeeeecCceee-----eeEEeeccccc--cccccCCCCccceeccCcccccCccccccccCCccc
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHF-----CKLSLVKEPYA--NAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFE 160 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
+.++|.++.+.. ..+....... ....+...+.. ..........++....... . .......+ ...+.
T Consensus 102 v~v~D~~tle~v----~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~-~-~~~~~~i~-~g~~~ 174 (369)
T PF02239_consen 102 VSVIDAETLEPV----KTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDP-K-NLKVTTIK-VGRFP 174 (369)
T ss_dssp EEEEETTT--EE----EEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTS-S-CEEEEEEE---TTE
T ss_pred eeEeccccccce----eecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccc-c-ccceeeec-ccccc
Confidence 999998876432 2222211100 00011111110 0000000111111110000 0 00000000 00000
Q ss_pred eecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEe----ecCCCCCCceEEEEE
Q 016769 161 IIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQA----YLPSKSQGFVNVLAG 236 (383)
Q Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~sg 236 (383)
.-..+.+++ +|++++....+.+-++|+++++.+..+.-... .+.+++..+.... +....... ..++.
T Consensus 175 ~D~~~dpdg-ry~~va~~~sn~i~viD~~~~k~v~~i~~g~~------p~~~~~~~~php~~g~vw~~~~~~~--~~~~~ 245 (369)
T PF02239_consen 175 HDGGFDPDG-RYFLVAANGSNKIAVIDTKTGKLVALIDTGKK------PHPGPGANFPHPGFGPVWATSGLGY--FAIPL 245 (369)
T ss_dssp EEEEE-TTS-SEEEEEEGGGTEEEEEETTTTEEEEEEE-SSS------BEETTEEEEEETTTEEEEEEEBSSS--SEEEE
T ss_pred cccccCccc-ceeeecccccceeEEEeeccceEEEEeecccc------ccccccccccCCCcceEEeeccccc--eeccc
Confidence 001133444 56666656667999999999887655532110 0111111111000 00000011 12222
Q ss_pred eCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEE----EcCCcEEEEEccCCCCeeEEeeeee-cCCCCeE
Q 016769 237 YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISG----GADQKIVLYNLDHSTGSCVIKKEIN-LERPGIS 311 (383)
Q Consensus 237 ~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~----~~d~~i~~wdl~~~~~~~~~~~~~~-~~~~~i~ 311 (383)
-....+.+||..+.. .+..++....+ ..+..+|++..+... ...+.|.++|.++.. ....+. .....+.
T Consensus 246 ig~~~v~v~d~~~wk-vv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~----~~~~i~~~~~~~~~ 319 (369)
T PF02239_consen 246 IGTDPVSVHDDYAWK-VVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLK----VVKTITPGPGKRVV 319 (369)
T ss_dssp EE--TTT-STTTBTS-EEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTE----EEE-HHHHHT--EE
T ss_pred ccCCccccchhhcCe-EEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcc----eeEEEeccCCCcEe
Confidence 223456678876633 45666655555 777789999988776 345789999987542 111221 1122488
Q ss_pred EEEECCCCcEEEEEeCCCc--EEEEEcCCCceEEEec
Q 016769 312 GTSIRPDSKIAATAGWDRR--VRIYNYRKGSALAILK 346 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~ 346 (383)
.+.|+++|+++..+.+++. |.+||..+.+....+.
T Consensus 320 h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 320 HMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp EEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred ccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence 8999999998777666555 9999999999888775
No 219
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.10 E-value=3.8e-09 Score=92.56 Aligned_cols=150 Identities=14% Similarity=0.158 Sum_probs=116.2
Q ss_pred eEEEEEeCCCcEEEEeCCC-----CCCceeeeec-cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee
Q 016769 231 VNVLAGYEDGSILVWDIRN-----PGIPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN 304 (383)
Q Consensus 231 ~~~~sg~~dg~i~~wdl~~-----~~~~~~~~~~-h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~ 304 (383)
.++++|+.|..+++|.+.. -..|+..+.. |...|.|+.|+.....+++|+.++++.+-|++..+... .....
T Consensus 69 ~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~--V~~~~ 146 (609)
T KOG4227|consen 69 RFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIY--VANEN 146 (609)
T ss_pred eEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeee--eeccc
Confidence 4789999999999999742 1134444433 45789999999888889999999999999998654222 22223
Q ss_pred cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCc-e--EEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCCC
Q 016769 305 LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS-A--LAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELYP 380 (383)
Q Consensus 305 ~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~-~--~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~~ 380 (383)
-..+.|..+..+|..+.+++.+.+|.|.+||.+... . +..+......-.++.|+|... +|++.+.-+-+-+||...
T Consensus 147 ~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~ 226 (609)
T KOG4227|consen 147 NNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRM 226 (609)
T ss_pred CcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeecc
Confidence 334579999999999999999999999999997643 2 234445666778899999876 889999999999999987
Q ss_pred CC
Q 016769 381 PH 382 (383)
Q Consensus 381 ~~ 382 (383)
|.
T Consensus 227 ~~ 228 (609)
T KOG4227|consen 227 QA 228 (609)
T ss_pred cc
Confidence 74
No 220
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.08 E-value=1.2e-08 Score=88.65 Aligned_cols=177 Identities=17% Similarity=0.212 Sum_probs=114.8
Q ss_pred eccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC---
Q 016769 175 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG--- 251 (383)
Q Consensus 175 ~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~--- 251 (383)
+++..|..||++|-.. +....++.. ....+-|++-. |.. ...++.|.. +-|.+|......
T Consensus 114 ava~nddvVriy~kss-t~pt~Lks~---------sQrnvtclawR---Pls---aselavgCr-~gIciW~~s~tln~~ 176 (445)
T KOG2139|consen 114 AVATNDDVVRIYDKSS-TCPTKLKSV---------SQRNVTCLAWR---PLS---ASELAVGCR-AGICIWSDSRTLNAN 176 (445)
T ss_pred hhhccCcEEEEeccCC-CCCceecch---------hhcceeEEEec---cCC---cceeeeeec-ceeEEEEcCcccccc
Confidence 3445567999999766 444444421 12234455433 321 224666664 459999754221
Q ss_pred Cc--------eeee--eccccCeEEEEEeCCCCceEEEEc-CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCc
Q 016769 252 IP--------LTAM--KVHLEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK 320 (383)
Q Consensus 252 ~~--------~~~~--~~h~~~v~~~~~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~ 320 (383)
.+ ...+ ++| .+|.+|.+.+++..+++++. |..|.|||.+..++..+. ....++++-+.|+||+.
T Consensus 177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~----~~glgg~slLkwSPdgd 251 (445)
T KOG2139|consen 177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI----PKGLGGFSLLKWSPDGD 251 (445)
T ss_pred cccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc----ccCCCceeeEEEcCCCC
Confidence 11 1112 234 68999999999998888886 566999999876654432 12346788999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcE
Q 016769 321 IAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTV 373 (383)
Q Consensus 321 ~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i 373 (383)
++.+++-|+..++|+......-..+.--.+.|....|+|+|+ +|.+.+..-.+
T Consensus 252 ~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp~l 305 (445)
T KOG2139|consen 252 VLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSPRL 305 (445)
T ss_pred EEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCCceE
Confidence 999999999999996654332222322344899999999999 45556654433
No 221
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.07 E-value=3.5e-08 Score=90.66 Aligned_cols=173 Identities=17% Similarity=0.246 Sum_probs=116.6
Q ss_pred eEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeee---
Q 016769 182 EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK--- 258 (383)
Q Consensus 182 ~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~--- 258 (383)
.|.-.+|+.+.-+..+.-.. +...++.+. +. ...++.|+.||.|.+||.+.... ...+.
T Consensus 156 evYRlNLEqGrfL~P~~~~~----------~~lN~v~in---~~----hgLla~Gt~~g~VEfwDpR~ksr-v~~l~~~~ 217 (703)
T KOG2321|consen 156 EVYRLNLEQGRFLNPFETDS----------GELNVVSIN---EE----HGLLACGTEDGVVEFWDPRDKSR-VGTLDAAS 217 (703)
T ss_pred ceEEEEcccccccccccccc----------ccceeeeec---Cc----cceEEecccCceEEEecchhhhh-heeeeccc
Confidence 57777888877655443211 112222221 11 12466788899999999987432 22221
Q ss_pred ---ccc-----cCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCC--CcEEEEEeCC
Q 016769 259 ---VHL-----EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD--SKIAATAGWD 328 (383)
Q Consensus 259 ---~h~-----~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~--~~~l~s~~~d 328 (383)
.|. -.|.++.|..++..++.|...|.+.||||.... .++.+.... .-.|..+.|.+. .+.+++ ...
T Consensus 218 ~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~--pl~~kdh~~-e~pi~~l~~~~~~~q~~v~S-~Dk 293 (703)
T KOG2321|consen 218 SVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASK--PLLVKDHGY-ELPIKKLDWQDTDQQNKVVS-MDK 293 (703)
T ss_pred ccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCC--ceeecccCC-ccceeeecccccCCCceEEe-cch
Confidence 122 248999998888888999999999999998654 333333222 235777777654 344554 456
Q ss_pred CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 329 RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 329 g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
..++|||-.+|+.+..+.. ...++.+++-|++-++.+|-++..+..|=
T Consensus 294 ~~~kiWd~~~Gk~~asiEp-t~~lND~C~~p~sGm~f~Ane~~~m~~yy 341 (703)
T KOG2321|consen 294 RILKIWDECTGKPMASIEP-TSDLNDFCFVPGSGMFFTANESSKMHTYY 341 (703)
T ss_pred HHhhhcccccCCceeeccc-cCCcCceeeecCCceEEEecCCCcceeEE
Confidence 7899999999999887753 34599999999999999999998877663
No 222
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.07 E-value=1.9e-08 Score=86.88 Aligned_cols=99 Identities=19% Similarity=0.353 Sum_probs=72.2
Q ss_pred EeCCCcEEEEeCCCCC-CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEE
Q 016769 236 GYEDGSILVWDIRNPG-IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 236 g~~dg~i~~wdl~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~ 314 (383)
|-..|.|..-.+.... .++..+++|..++.++.+++....+++|..|..+..||+....+.. .++..+...+..+.
T Consensus 171 Gd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~---~el~gh~~kV~~l~ 247 (404)
T KOG1409|consen 171 GDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTA---YELQGHNDKVQALS 247 (404)
T ss_pred cccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCccee---eeeccchhhhhhhh
Confidence 4444555444433222 3467788999999999999998899999999999999997654432 23334445566666
Q ss_pred ECCCCcEEEEEeCCCcEEEEEcC
Q 016769 315 IRPDSKIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 315 ~~p~~~~l~s~~~dg~i~iwd~~ 337 (383)
.-+--+.+.+++.||.|.+||++
T Consensus 248 ~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 248 YAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred hhhhheeeeeccCCCeEEEEecc
Confidence 65666789999999999999985
No 223
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.06 E-value=3.3e-10 Score=68.28 Aligned_cols=38 Identities=29% Similarity=0.711 Sum_probs=36.1
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEee
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD 46 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~ 46 (383)
+++.+|++|.+.|++|+|+|++.+|+||+.|++|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 36789999999999999999999999999999999997
No 224
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.05 E-value=2e-09 Score=95.08 Aligned_cols=144 Identities=19% Similarity=0.217 Sum_probs=102.8
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.+.+|+.||++|+|+.-+- .++..+..|...|.++.|+++++.+++-+.| ..++|+.+.. .+...+..........
T Consensus 158 ~latgg~dg~lRv~~~Ps~-~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g--~~~a~~t~~~k~~~~~ 233 (398)
T KOG0771|consen 158 KLATGGTDGTLRVWEWPSM-LTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTG--AALARKTPFSKDEMFS 233 (398)
T ss_pred EeeeccccceEEEEecCcc-hhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccC--chhhhcCCcccchhhh
Confidence 5888999999999995432 2344556788899999999999999999999 8999998754 3333333222234466
Q ss_pred EEEECCCC-----cEEEEEeCCCcEEEEEcCCCc---eE--EEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 312 GTSIRPDS-----KIAATAGWDRRVRIYNYRKGS---AL--AILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~~-----~~l~s~~~dg~i~iwd~~~~~---~~--~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+.|+.|+ ..++....-+.|+.||+...+ .+ ...-.-.+.|.+++.|+||+++|-|+.||.|-+++..
T Consensus 234 ~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~ 311 (398)
T KOG0771|consen 234 SCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAK 311 (398)
T ss_pred hceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEec
Confidence 77788777 344444556677777773211 11 1111223469999999999999999999999999874
No 225
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.04 E-value=5.5e-09 Score=89.35 Aligned_cols=146 Identities=12% Similarity=0.150 Sum_probs=114.0
Q ss_pred EEEEEeCCCcEEEEeCCCCC--CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEcc-CCCCeeEEeeeeecCCC
Q 016769 232 NVLAGYEDGSILVWDIRNPG--IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD-HSTGSCVIKKEINLERP 308 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~-~~~~~~~~~~~~~~~~~ 308 (383)
.++.+-+...|.||...... .+.++++.|...|..+.+.+..+.+++|+.|..-.+|... ..+-+. ...+.....
T Consensus 24 ~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~Wkp--tlvLlRiNr 101 (361)
T KOG1523|consen 24 QIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKP--TLVLLRINR 101 (361)
T ss_pred eEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeecc--ceeEEEecc
Confidence 35667778899999876543 3567889999999999999999999999999999999873 222111 112333345
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEE----EecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA----ILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
..+++.++|..+.||+|+.-+.|.+|-.+.-+-=. .-+.++..|.+++|+|++-+||.||-|+..++|..|
T Consensus 102 AAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSay 176 (361)
T KOG1523|consen 102 AATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAY 176 (361)
T ss_pred ceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEe
Confidence 68899999999999999999999999886533211 112467789999999999999999999999999765
No 226
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.03 E-value=3.3e-08 Score=85.44 Aligned_cols=71 Identities=11% Similarity=0.214 Sum_probs=56.0
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEc-CCCceEEEeccccc------------c---eeEEEEeCCCCEEEEEeCCC
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNY-RKGSALAILKYHHA------------T---CNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~h~~------------~---v~~v~~spd~~~las~s~d~ 371 (383)
.+|+.+.|+++|+|+++=.. -+|++||+ ...+++.+++-|.. . -..++||.++.+++|||..+
T Consensus 273 sSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n 351 (433)
T KOG1354|consen 273 SSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNN 351 (433)
T ss_pred hhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccc
Confidence 45788999999999986432 68999999 56677777765532 1 25567999999999999999
Q ss_pred cEEEEeCC
Q 016769 372 TVALWELY 379 (383)
Q Consensus 372 ~i~~w~~~ 379 (383)
..+++++.
T Consensus 352 ~frvf~~~ 359 (433)
T KOG1354|consen 352 VFRVFNLA 359 (433)
T ss_pred eEEEecCC
Confidence 99999864
No 227
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.03 E-value=4e-10 Score=100.61 Aligned_cols=181 Identities=14% Similarity=0.154 Sum_probs=131.9
Q ss_pred eeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
.++. |+..|.+-..|..+++..+.+.-...+.++.+-+.. .+++..+.+.+.|||= . +
T Consensus 143 hlll-gGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHne-------------------q~~AVAQK~y~yvYD~-~-G 200 (545)
T KOG1272|consen 143 HLLL-GGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNE-------------------QFFAVAQKKYVYVYDN-N-G 200 (545)
T ss_pred EEEe-cCCccceeeeecccceeeeeeehhhhhhhhhhhcch-------------------HHHHhhhhceEEEecC-C-C
Confidence 4444 455789999999998876665433333222221111 1344556788899983 3 3
Q ss_pred CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcE
Q 016769 252 IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRV 331 (383)
Q Consensus 252 ~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i 331 (383)
.-++.++.| ..|..+.|-|.-..|++++..|.++--|+..... ...+....+.+..+.-+|-+..+-.|...|+|
T Consensus 201 tElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~Gkl----Va~~~t~~G~~~vm~qNP~NaVih~GhsnGtV 275 (545)
T KOG1272|consen 201 TELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKL----VASIRTGAGRTDVMKQNPYNAVIHLGHSNGTV 275 (545)
T ss_pred cEEeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhh----hHHHHccCCccchhhcCCccceEEEcCCCceE
Confidence 445666655 3677788877666667788888888778754321 12233344567778888998899999999999
Q ss_pred EEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 332 RIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 332 ~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+|.....+++..+..|..+|.+|++.|+|+++||++.|..++|||+.
T Consensus 276 SlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR 323 (545)
T KOG1272|consen 276 SLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLR 323 (545)
T ss_pred EecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeec
Confidence 999999999888888999999999999999999999999999999985
No 228
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.98 E-value=2.3e-07 Score=87.88 Aligned_cols=111 Identities=13% Similarity=0.069 Sum_probs=69.3
Q ss_pred CcEEEE--eCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcC---CcEEEEEccCCCCeeEEeeeeecCCCCeEEEE
Q 016769 240 GSILVW--DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD---QKIVLYNLDHSTGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 240 g~i~~w--dl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d---~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~ 314 (383)
+...|| |+.... ...+..+...+....+++++..++..+.+ ..|.+||++..... .+. .........
T Consensus 309 g~~~Iy~~d~~~g~--~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt-----~~~~~~~p~ 380 (429)
T PRK03629 309 GRPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLT-----DTFLDETPS 380 (429)
T ss_pred CCceEEEEECCCCC--eEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeC-----CCCCCCCce
Confidence 344444 554422 22333333345567889998887665443 34778888654321 111 111234567
Q ss_pred ECCCCcEEEEEeCCCc---EEEEEcCCCceEEEecccccceeEEEEeC
Q 016769 315 IRPDSKIAATAGWDRR---VRIYNYRKGSALAILKYHHATCNAVSFSS 359 (383)
Q Consensus 315 ~~p~~~~l~s~~~dg~---i~iwd~~~~~~~~~~~~h~~~v~~v~~sp 359 (383)
|+|||++|+.++.++. +.++++ +++....+.+|...+...+|+|
T Consensus 381 ~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 381 IAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred ECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcCCcccCC
Confidence 9999999999998875 566677 4555666777888888899998
No 229
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.97 E-value=1.9e-07 Score=88.47 Aligned_cols=191 Identities=13% Similarity=0.105 Sum_probs=109.6
Q ss_pred ccCCCCCceeeecc-CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC--
Q 016769 164 DVPAEGPKYMAVAG-EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG-- 240 (383)
Q Consensus 164 ~~~~~~~~~~~~~g-~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg-- 240 (383)
.++++|+++..++. .....+.+||+.+++.............+ .+.|+. ...+++...+|
T Consensus 205 ~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~--------------~~SPDG---~~La~~~~~~g~~ 267 (429)
T PRK03629 205 AWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAP--------------AFSPDG---SKLAFALSKTGSL 267 (429)
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCe--------------EECCCC---CEEEEEEcCCCCc
Confidence 45577765544432 22357999999887632211111111111 244432 22233333344
Q ss_pred cEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc-CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC
Q 016769 241 SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319 (383)
Q Consensus 241 ~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 319 (383)
.|.+||+.+.. ...+..+...+....|+|++..++..+. ++...+|.++..++... .+...........|+|||
T Consensus 268 ~I~~~d~~tg~--~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~---~lt~~~~~~~~~~~SpDG 342 (429)
T PRK03629 268 NLYVMDLASGQ--IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ---RITWEGSQNQDADVSSDG 342 (429)
T ss_pred EEEEEECCCCC--EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE---EeecCCCCccCEEECCCC
Confidence 58889987643 2334434445677889999988766554 45556665443332211 112222345568899999
Q ss_pred cEEEEEeCC---CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCc---EEEEeC
Q 016769 320 KIAATAGWD---RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST---VALWEL 378 (383)
Q Consensus 320 ~~l~s~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~---i~~w~~ 378 (383)
++|+..+.+ ..|.+||+.+++.. .+... .......|+|||++|+.++.|+. +.++++
T Consensus 343 ~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~ 405 (429)
T PRK03629 343 KFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVST 405 (429)
T ss_pred CEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEEC
Confidence 998876654 35888999887643 33221 12345689999999999998875 555665
No 230
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.94 E-value=1.6e-07 Score=88.90 Aligned_cols=186 Identities=16% Similarity=0.158 Sum_probs=107.2
Q ss_pred ccCCCCCceeeeccC-CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcE
Q 016769 164 DVPAEGPKYMAVAGE-QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 242 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~-~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i 242 (383)
.++++|++++.++.. ....|.+||+.+++............. ..+.|+. ...+++.+.++..
T Consensus 202 ~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~--------------~~~SPDG---~~la~~~~~~g~~ 264 (427)
T PRK02889 202 AWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSA--------------PAWSPDG---RTLAVALSRDGNS 264 (427)
T ss_pred eEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccc--------------eEECCCC---CEEEEEEccCCCc
Confidence 345677654443322 224699999988764321111100001 1244432 2233456778887
Q ss_pred EEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcE
Q 016769 243 LVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 321 (383)
Q Consensus 243 ~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 321 (383)
.||.+.........+..+........|++++..++..+ .++...+|.++..++.... +..........+|+|||++
T Consensus 265 ~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~---lt~~g~~~~~~~~SpDG~~ 341 (427)
T PRK02889 265 QIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQR---VTFTGSYNTSPRISPDGKL 341 (427)
T ss_pred eEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEE---EecCCCCcCceEECCCCCE
Confidence 77765322222344444444455678999998776544 4567778876543332211 1112222345789999999
Q ss_pred EEEEeCCC---cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCC
Q 016769 322 AATAGWDR---RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 322 l~s~~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~ 371 (383)
|+..+.++ .|.+||+.+++... +... .......|+|||++|+.++.++
T Consensus 342 Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~~~~~p~~spdg~~l~~~~~~~ 392 (427)
T PRK02889 342 LAYISRVGGAFKLYVQDLATGQVTA-LTDT-TRDESPSFAPNGRYILYATQQG 392 (427)
T ss_pred EEEEEccCCcEEEEEEECCCCCeEE-ccCC-CCccCceECCCCCEEEEEEecC
Confidence 98777654 69999998876543 3222 2345678999999888777655
No 231
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.92 E-value=3.9e-09 Score=63.49 Aligned_cols=38 Identities=26% Similarity=0.607 Sum_probs=36.0
Q ss_pred ceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 340 SALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 340 ~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
+++.++.+|...|.+++|+|++++|++|+.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 56788999999999999999999999999999999997
No 232
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=98.91 E-value=3.5e-08 Score=96.47 Aligned_cols=139 Identities=17% Similarity=0.193 Sum_probs=104.3
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccc----cCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHL----EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
++....+..+.+||..... ....++... .+..-+.+++..-+.++|+.-+.|.+|+........ ....|.+
T Consensus 102 i~l~~~~ns~~i~d~~~~~-~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~----~l~GHeG 176 (967)
T KOG0974|consen 102 IALVTSRNSLLIRDSKNSS-VLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPI----RLKGHEG 176 (967)
T ss_pred EEEEEcCceEEEEecccCc-eehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcc----eecccCC
Confidence 5556667889999976532 222222111 112222234444466888889999999987333222 2456888
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEE-EecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA-ILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.|..+.++.||+++++.|.|+++|+|++++.+... +.-+|...|+.+.|+|. .++|++.|.+.++|+.
T Consensus 177 ~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~ 245 (967)
T KOG0974|consen 177 SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGV 245 (967)
T ss_pred ceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEec
Confidence 99999999999999999999999999999988876 55689999999999987 8999999999999964
No 233
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.88 E-value=6.8e-07 Score=84.93 Aligned_cols=190 Identities=21% Similarity=0.218 Sum_probs=106.2
Q ss_pred cCCCCCceeeeccC-CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC--c
Q 016769 165 VPAEGPKYMAVAGE-QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG--S 241 (383)
Q Consensus 165 ~~~~~~~~~~~~g~-~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg--~ 241 (383)
+++++..++.++-. ....|.+||+.+++.............+ .+.|+ +...+++.+.+| .
T Consensus 211 wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~--------------~~SpD---G~~l~~~~s~~g~~~ 273 (433)
T PRK04922 211 WSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAP--------------SFSPD---GRRLALTLSRDGNPE 273 (433)
T ss_pred CCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCc--------------eECCC---CCEEEEEEeCCCCce
Confidence 45666644443321 2346999999887642211111111111 23332 222233444444 5
Q ss_pred EEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCc
Q 016769 242 ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK 320 (383)
Q Consensus 242 i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~ 320 (383)
|.+||+.++. ...+..+........|++++..++..+ .++...+|.++..++... .+..........+|+|||+
T Consensus 274 Iy~~d~~~g~--~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~---~lt~~g~~~~~~~~SpDG~ 348 (433)
T PRK04922 274 IYVMDLGSRQ--LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE---RLTFQGNYNARASVSPDGK 348 (433)
T ss_pred EEEEECCCCC--eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE---EeecCCCCccCEEECCCCC
Confidence 9999987643 334444544456688999998776655 455544444332222211 1112222344689999999
Q ss_pred EEEEEeCCC---cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCC---CcEEEEeC
Q 016769 321 IAATAGWDR---RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED---STVALWEL 378 (383)
Q Consensus 321 ~l~s~~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d---~~i~~w~~ 378 (383)
+|+..+.++ .|.+||+.+++.. .+. +........|+|||++++..+.+ ..+.++++
T Consensus 349 ~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~ 410 (433)
T PRK04922 349 KIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVST 410 (433)
T ss_pred EEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence 988766443 6999999877654 332 22234567899999988776654 24555555
No 234
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.84 E-value=8.1e-05 Score=68.54 Aligned_cols=203 Identities=15% Similarity=0.232 Sum_probs=114.5
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEecc---C-cCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQ---N-SCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~---~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
++++++.-..+.+.++++...-.+....+ . .....+.........++ .+.|++ ...+++.-....|.+|+
T Consensus 99 ~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v---~~~pdg---~~v~v~dlG~D~v~~~~ 172 (345)
T PF10282_consen 99 RFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQV---VFSPDG---RFVYVPDLGADRVYVYD 172 (345)
T ss_dssp SEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEE---EE-TTS---SEEEEEETTTTEEEEEE
T ss_pred CEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeE---EECCCC---CEEEEEecCCCEEEEEE
Confidence 45666655578899999977433222211 0 00000000011111222 244432 22344454556899999
Q ss_pred CCCCCCcee---eeecc-ccCeEEEEEeCCCCceEE-EEcCCcEEEEEccCCCCeeEEeeeeec-----C-CCCeEEEEE
Q 016769 247 IRNPGIPLT---AMKVH-LEPVLCLSIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKKEINL-----E-RPGISGTSI 315 (383)
Q Consensus 247 l~~~~~~~~---~~~~h-~~~v~~~~~~~~~~~~~s-~~~d~~i~~wdl~~~~~~~~~~~~~~~-----~-~~~i~~~~~ 315 (383)
+......+. .++.. ...-+.+.|+++++.++. .-.+++|.+++++..++.......... . ......+.+
T Consensus 173 ~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~i 252 (345)
T PF10282_consen 173 IDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAI 252 (345)
T ss_dssp E-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE
T ss_pred EeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEE
Confidence 876442221 22222 234578999999887654 456888999999855554433322221 1 125788999
Q ss_pred CCCCcEEEEEe-CCCcEEEEEcCC--Cc--eEEEecccccceeEEEEeCCCCEEEEEe-CCCcEEEEeCC
Q 016769 316 RPDSKIAATAG-WDRRVRIYNYRK--GS--ALAILKYHHATCNAVSFSSDCKLMASAS-EDSTVALWELY 379 (383)
Q Consensus 316 ~p~~~~l~s~~-~dg~i~iwd~~~--~~--~~~~~~~h~~~v~~v~~spd~~~las~s-~d~~i~~w~~~ 379 (383)
+||+++|.++. .+..|.+|+++. ++ .+..+.........++|+|||++|+.+. .++.|.+|++.
T Consensus 253 spdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d 322 (345)
T PF10282_consen 253 SPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDID 322 (345)
T ss_dssp -TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred ecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEe
Confidence 99999866655 677899999942 33 2333333344578899999999877665 67799999874
No 235
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.83 E-value=7.7e-07 Score=84.37 Aligned_cols=135 Identities=13% Similarity=0.072 Sum_probs=84.6
Q ss_pred CcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceE-EEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCC
Q 016769 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD 318 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 318 (383)
..|.+||+.++.. ..+......+....|+|++..++ +.+.++...+|.++..++... .+..+........|+||
T Consensus 220 ~~I~~~dl~~g~~--~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~---~lt~~~~~~~~~~wSpD 294 (427)
T PRK02889 220 PVVYVHDLATGRR--RVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLR---RLTQSSGIDTEPFFSPD 294 (427)
T ss_pred cEEEEEECCCCCE--EEeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCCcE---ECCCCCCCCcCeEEcCC
Confidence 4699999986432 22322234456788999998775 567788878877654333211 12222233456789999
Q ss_pred CcEEEEEeC-CCcEEEEEc--CCCceEEEecccccceeEEEEeCCCCEEEEEeCCC---cEEEEeCCC
Q 016769 319 SKIAATAGW-DRRVRIYNY--RKGSALAILKYHHATCNAVSFSSDCKLMASASEDS---TVALWELYP 380 (383)
Q Consensus 319 ~~~l~s~~~-dg~i~iwd~--~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~---~i~~w~~~~ 380 (383)
|+.|+..+. ++...+|.+ ..++.. .+..+.......+|||||++|+..+.++ .|.+||+..
T Consensus 295 G~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~ 361 (427)
T PRK02889 295 GRSIYFTSDRGGAPQIYRMPASGGAAQ-RVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLAT 361 (427)
T ss_pred CCEEEEEecCCCCcEEEEEECCCCceE-EEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCC
Confidence 998876654 466677765 444322 2222223344578999999999887665 589999853
No 236
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=98.82 E-value=1e-07 Score=82.97 Aligned_cols=143 Identities=15% Similarity=0.265 Sum_probs=100.8
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeee-ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeE----------Eee
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMK-VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV----------IKK 301 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~----------~~~ 301 (383)
++++..|-.|++||-.+ ..+. .++ .-...|.+++|-|.....++.+..+-|.+|..+....... ...
T Consensus 113 fava~nddvVriy~kss-t~pt-~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~r~~~~~s~~~~qvl 190 (445)
T KOG2139|consen 113 FAVATNDDVVRIYDKSS-TCPT-KLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNANRNIRMMSTHHLQVL 190 (445)
T ss_pred hhhhccCcEEEEeccCC-CCCc-eecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccccccccccccchhhe
Confidence 55678899999999655 4433 233 3356899999977666555555566699998753211100 000
Q ss_pred eeecCCCCeEEEEECCCCcEEEEEeC-CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 302 EINLERPGISGTSIRPDSKIAATAGW-DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 302 ~~~~~~~~i~~~~~~p~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
... ....|+++.+.+||..+++++. |..|+|||.+++..+.....-...+.-+.|||||.+|..+.-|+.-++|+.
T Consensus 191 ~~p-gh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 191 QDP-GHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred eCC-CCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehh
Confidence 111 2246899999999999998884 778999999988765433233445777899999999999999999999964
No 237
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.82 E-value=1.1e-06 Score=83.51 Aligned_cols=133 Identities=17% Similarity=0.057 Sum_probs=83.5
Q ss_pred CCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceE-EEEcCC--cEEEEEccCCCCeeEEeeeeecCCCCeEEEEE
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQ--KIVLYNLDHSTGSCVIKKEINLERPGISGTSI 315 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-s~~~d~--~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~ 315 (383)
+..|.+||+..+.. ..+..+........|++++..++ +.+.++ .|.+||++..... .+..+.......+|
T Consensus 227 ~~~l~~~dl~~g~~--~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-----~lt~~~~~~~~~~~ 299 (433)
T PRK04922 227 RSAIYVQDLATGQR--ELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLT-----RLTNHFGIDTEPTW 299 (433)
T ss_pred CcEEEEEECCCCCE--EEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeE-----ECccCCCCccceEE
Confidence 44699999976432 22333333445678999998764 445555 4888888654311 12222223456889
Q ss_pred CCCCcEEEEEeC-CCc--EEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCC---cEEEEeCC
Q 016769 316 RPDSKIAATAGW-DRR--VRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS---TVALWELY 379 (383)
Q Consensus 316 ~p~~~~l~s~~~-dg~--i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~---~i~~w~~~ 379 (383)
+||+++|+.++. ++. |+++|+.+++.. .+..+.......+|||||++++..+.++ .|.+||+.
T Consensus 300 spDG~~l~f~sd~~g~~~iy~~dl~~g~~~-~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~ 368 (433)
T PRK04922 300 APDGKSIYFTSDRGGRPQIYRVAASGGSAE-RLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLS 368 (433)
T ss_pred CCCCCEEEEEECCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECC
Confidence 999998887664 444 666677666533 2222334455689999999988766543 58899874
No 238
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.81 E-value=1.3e-06 Score=83.09 Aligned_cols=189 Identities=13% Similarity=0.095 Sum_probs=107.3
Q ss_pred ccCCCCCceeeecc-CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCc-
Q 016769 164 DVPAEGPKYMAVAG-EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS- 241 (383)
Q Consensus 164 ~~~~~~~~~~~~~g-~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~- 241 (383)
.++++|++++.++. ..+..|.+||+++++.............+ .+.|+ +...+++.+.++.
T Consensus 208 ~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~--------------~~SPD---G~~la~~~~~~g~~ 270 (435)
T PRK05137 208 RFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAP--------------RFSPD---GRKVVMSLSQGGNT 270 (435)
T ss_pred EECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCc--------------EECCC---CCEEEEEEecCCCc
Confidence 35577765444432 22468999999887642211111000111 23333 2222345555555
Q ss_pred -EEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE-cCC--cEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC
Q 016769 242 -ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQ--KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 242 -i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~--~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p 317 (383)
|.+||+++.. ...+..+........|++++..++..+ .++ .|.++|++...... +...........|+|
T Consensus 271 ~Iy~~d~~~~~--~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-----lt~~~~~~~~~~~Sp 343 (435)
T PRK05137 271 DIYTMDLRSGT--TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-----ISFGGGRYSTPVWSP 343 (435)
T ss_pred eEEEEECCCCc--eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-----eecCCCcccCeEECC
Confidence 6677887643 344555555566788999988776555 333 46677765432211 112233456678999
Q ss_pred CCcEEEEEeCC---CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCC------cEEEEeC
Q 016769 318 DSKIAATAGWD---RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS------TVALWEL 378 (383)
Q Consensus 318 ~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~------~i~~w~~ 378 (383)
||++|+..+.+ ..|.+||+..+.. ..+. ....+....|+|||++|+..+.++ .+.+.|+
T Consensus 344 dG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl 411 (435)
T PRK05137 344 RGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDL 411 (435)
T ss_pred CCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEEC
Confidence 99998877654 3688888865443 2332 223466789999999887765532 3555555
No 239
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.81 E-value=3.2e-07 Score=76.84 Aligned_cols=101 Identities=16% Similarity=0.280 Sum_probs=73.6
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcC---CcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD---QKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d---~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
++.|..++.|.+||++. ..+..+ +..++..+.|+|.+..++.++.+ |.+.+||.+... .+ ...+...
T Consensus 76 vi~g~~~~~v~lyd~~~--~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~--~i----~~~~~~~ 145 (194)
T PF08662_consen 76 VIYGSMPAKVTLYDVKG--KKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKK--KI----STFEHSD 145 (194)
T ss_pred EEEccCCcccEEEcCcc--cEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCE--Ee----eccccCc
Confidence 44566788999999962 233333 45677899999999999888754 569999997432 21 1223346
Q ss_pred eEEEEECCCCcEEEEEeC------CCcEEEEEcCCCceEEE
Q 016769 310 ISGTSIRPDSKIAATAGW------DRRVRIYNYRKGSALAI 344 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~------dg~i~iwd~~~~~~~~~ 344 (383)
++.++|+|||++|++++. |..++||+. .|+.+..
T Consensus 146 ~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~~ 185 (194)
T PF08662_consen 146 ATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF-QGRLLYK 185 (194)
T ss_pred EEEEEEcCCCCEEEEEEeccceeccccEEEEEe-cCeEeEe
Confidence 889999999999999875 788899998 4665543
No 240
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=98.81 E-value=7.9e-06 Score=75.38 Aligned_cols=130 Identities=15% Similarity=0.279 Sum_probs=89.9
Q ss_pred CCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEE-Ec-CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEEC
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISG-GA-DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 316 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~-~~-d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~ 316 (383)
..++.+.++..... .-.+ ..++||.++.|++++..++.+ |. =..+.++|++. ... .....+.-+++.|+
T Consensus 250 Eq~Lyll~t~g~s~-~V~L-~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~---~~v----~df~egpRN~~~fn 320 (566)
T KOG2315|consen 250 EQTLYLLATQGESV-SVPL-LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG---KPV----FDFPEGPRNTAFFN 320 (566)
T ss_pred cceEEEEEecCceE-EEec-CCCCCceEEEECCCCCEEEEEEecccceEEEEcCCC---CEe----EeCCCCCccceEEC
Confidence 44677777662211 1111 136799999999998765443 32 23467888753 222 23344566789999
Q ss_pred CCCcEEEEEeC---CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeC------CCcEEEEeCC
Q 016769 317 PDSKIAATAGW---DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE------DSTVALWELY 379 (383)
Q Consensus 317 p~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~------d~~i~~w~~~ 379 (383)
|.|++++.+|. -|.+-+||+.+.+.+..+. .....-.+|+|||+++.|+.- |+.++||+++
T Consensus 321 p~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~--a~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 321 PHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFK--AANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred CCCCEEEEeecCCCCCceEEEeccchhhccccc--cCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence 99999999986 4789999999988887765 333455689999998877653 6889999874
No 241
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=98.80 E-value=2.2e-07 Score=83.88 Aligned_cols=187 Identities=20% Similarity=0.265 Sum_probs=116.2
Q ss_pred eccCCcceEEEEecCC-CCee--eEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 175 VAGEQLSEVEIWDLNT-AERC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 175 ~~g~~~~~i~~Wdl~~-~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
+..+.|+.+|+-.+.. +.+- ..+. .+.+....+++.++.|. .+.++++|+.++=+|++...
T Consensus 203 ~~~s~dgqvr~s~i~~t~~~e~t~rl~----------~h~g~vhklav~p~sp~------~f~S~geD~~v~~~Dlr~~~ 266 (559)
T KOG1334|consen 203 VTSSRDGQVRVSEILETGYVENTKRLA----------PHEGPVHKLAVEPDSPK------PFLSCGEDAVVFHIDLRQDV 266 (559)
T ss_pred eeccccCceeeeeeccccceecceecc----------cccCccceeeecCCCCC------cccccccccceeeeeeccCC
Confidence 3345577888766533 2221 1111 12334444555444432 47899999999999998743
Q ss_pred Cceeee--ecccc----CeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCe---eEEee---e-e-ecCCCCeEEEEEC
Q 016769 252 IPLTAM--KVHLE----PVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGS---CVIKK---E-I-NLERPGISGTSIR 316 (383)
Q Consensus 252 ~~~~~~--~~h~~----~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~---~~~~~---~-~-~~~~~~i~~~~~~ 316 (383)
+...+ ..+.. ....++.+|... .+++++.|.-+++||...-... ..+.+ . + .-..-.|++++|+
T Consensus 267 -pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ys 345 (559)
T KOG1334|consen 267 -PAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYS 345 (559)
T ss_pred -ccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEec
Confidence 22221 12222 245677788765 5789999999999987532111 00000 0 0 1112358999999
Q ss_pred CCCcEEEEEeCCCcEEEEEcCC--C----------ceEEE-eccccc--ceeEEEE-eCCCCEEEEEeCCCcEEEEeC
Q 016769 317 PDSKIAATAGWDRRVRIYNYRK--G----------SALAI-LKYHHA--TCNAVSF-SSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 317 p~~~~l~s~~~dg~i~iwd~~~--~----------~~~~~-~~~h~~--~v~~v~~-spd~~~las~s~d~~i~~w~~ 378 (383)
.++.-+.++-.|--|++|+-.- | ..++. ++||.+ .|..|-| -|...+++|||.=|.|.||+=
T Consensus 346 h~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K 423 (559)
T KOG1334|consen 346 HDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDK 423 (559)
T ss_pred CCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEec
Confidence 8877777778898999995532 2 11233 788875 5777765 588889999999999999974
No 242
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.78 E-value=3e-05 Score=71.37 Aligned_cols=284 Identities=14% Similarity=0.168 Sum_probs=147.9
Q ss_pred eeEEEeCCCCeEEEecC----CCeEEEeeCccc-cccccc-ccccccceeeeeeecCCCCcceeEec-ccCCeEEEeecC
Q 016769 22 TDVCFHQTKPILFAGTT----GGELRIWDTVQH-RTVSSS-WVHSAAHGIVSVATGPSIGLNKVISQ-GRDGTVKCWDIE 94 (383)
Q Consensus 22 ~~v~f~~~~~~L~sgs~----D~~v~vW~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~-~~D~ti~~Wd~~ 94 (383)
..|+++|++++|++..+ ++.|..|.+... ..+..+ ........-..+++.+ +++.|+.+ -.++++.++++.
T Consensus 40 s~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~--~g~~l~vany~~g~v~v~~l~ 117 (345)
T PF10282_consen 40 SWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDP--DGRFLYVANYGGGSVSVFPLD 117 (345)
T ss_dssp CCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECT--TSSEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEec--CCCEEEEEEccCCeEEEEEcc
Confidence 45789999999999887 468888887653 222111 1111122334466666 35666554 578999999997
Q ss_pred CCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceee
Q 016769 95 NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMA 174 (383)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (383)
....+....... .. .-. .+.. ... ...+. -...+.++++ ++.
T Consensus 118 ~~g~l~~~~~~~-~~-------~g~-g~~~-~rq-------------------------~~~h~--H~v~~~pdg~-~v~ 159 (345)
T PF10282_consen 118 DDGSLGEVVQTV-RH-------EGS-GPNP-DRQ-------------------------EGPHP--HQVVFSPDGR-FVY 159 (345)
T ss_dssp TTSEEEEEEEEE-ES-------EEE-ESST-TTT-------------------------SSTCE--EEEEE-TTSS-EEE
T ss_pred CCcccceeeeec-cc-------CCC-CCcc-ccc-------------------------ccccc--eeEEECCCCC-EEE
Confidence 642111000000 00 000 0000 000 00000 0112334443 455
Q ss_pred eccCCcceEEEEecCCCC-eeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc
Q 016769 175 VAGEQLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 253 (383)
Q Consensus 175 ~~g~~~~~i~~Wdl~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~ 253 (383)
+..-....|.++++.... .+.....-. .+.+.+=+- ..|.|+ +....++.-.+++|.++++....-.
T Consensus 160 v~dlG~D~v~~~~~~~~~~~l~~~~~~~-------~~~G~GPRh--~~f~pd---g~~~Yv~~e~s~~v~v~~~~~~~g~ 227 (345)
T PF10282_consen 160 VPDLGADRVYVYDIDDDTGKLTPVDSIK-------VPPGSGPRH--LAFSPD---GKYAYVVNELSNTVSVFDYDPSDGS 227 (345)
T ss_dssp EEETTTTEEEEEEE-TTS-TEEEEEEEE-------CSTTSSEEE--EEE-TT---SSEEEEEETTTTEEEEEEEETTTTE
T ss_pred EEecCCCEEEEEEEeCCCceEEEeeccc-------cccCCCCcE--EEEcCC---cCEEEEecCCCCcEEEEeecccCCc
Confidence 554334579999997655 222211000 001111111 124443 2233456778889999988722211
Q ss_pred eeeee------c-c--ccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEE
Q 016769 254 LTAMK------V-H--LEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAA 323 (383)
Q Consensus 254 ~~~~~------~-h--~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~ 323 (383)
+..++ . . ......+.++++++.++.+. ..+.|.+|+++..++.................++++|+|++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~ 307 (345)
T PF10282_consen 228 LTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLY 307 (345)
T ss_dssp EEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEE
T ss_pred eeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEE
Confidence 21111 1 1 11456788899999876655 5678999999766665555555555455689999999999988
Q ss_pred EEe-CCCcEEEEEcC--CCceEEEec-ccccceeEEEE
Q 016769 324 TAG-WDRRVRIYNYR--KGSALAILK-YHHATCNAVSF 357 (383)
Q Consensus 324 s~~-~dg~i~iwd~~--~~~~~~~~~-~h~~~v~~v~~ 357 (383)
++. .+++|.+|+++ +|.....-. -......||.|
T Consensus 308 Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 308 VANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred EEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 777 67799999874 555332221 12234566665
No 243
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=98.77 E-value=6.9e-08 Score=99.24 Aligned_cols=204 Identities=14% Similarity=0.236 Sum_probs=128.7
Q ss_pred eeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeec
Q 016769 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (383)
Q Consensus 14 l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~ 93 (383)
++-|-..|.++.=||.-.+-+||+.||.|++|....+..+......+. ..+....|+. .|+.+..+-.||-+.+|..
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~--qGnk~~i~d~dg~l~l~q~ 2280 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNH--QGNKFGIVDGDGDLSLWQA 2280 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhcc--cCCceeeeccCCceeeccc
Confidence 445567888888899999999999999999999876655443332222 3455556655 4788888889999999987
Q ss_pred CCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCcee
Q 016769 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYM 173 (383)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (383)
... +...- .. +.+ ... .+.
T Consensus 2281 ~pk-----~~~s~---------------qc---------------------------hnk-------~~~-------Df~ 2299 (2439)
T KOG1064|consen 2281 SPK-----PYTSW---------------QC---------------------------HNK-------ALS-------DFR 2299 (2439)
T ss_pred CCc-----ceecc---------------cc---------------------------CCc-------ccc-------cee
Confidence 521 00000 00 000 000 001
Q ss_pred eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc
Q 016769 174 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 253 (383)
Q Consensus 174 ~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~ 253 (383)
+++ + + +.+. + ..+.++.+.+||.-.+...
T Consensus 2300 Fi~-s----~----------~~ta--------------g----------------------~s~d~~n~~lwDtl~~~~~ 2328 (2439)
T KOG1064|consen 2300 FIG-S----L----------LATA--------------G----------------------RSSDNRNVCLWDTLLPPMN 2328 (2439)
T ss_pred eee-h----h----------hhcc--------------c----------------------cCCCCCcccchhcccCccc
Confidence 110 0 0 0000 0 1133667778875432211
Q ss_pred eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEE
Q 016769 254 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 333 (383)
Q Consensus 254 ~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~i 333 (383)
-..-+.|-+.++++.+-|.-..+++||.+|.|++||+...+-++.+.. +. ...+|++|+..|.|+|
T Consensus 2329 s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~-------------~~-~~~~f~~~ss~g~ikI 2394 (2439)
T KOG1064|consen 2329 SLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA-------------LD-TREYFVTGSSEGNIKI 2394 (2439)
T ss_pred ceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh-------------hh-hhheeeccCcccceEE
Confidence 111267888999999999989999999999999999975443222211 23 4458999999999999
Q ss_pred EEcCCCceEEEec
Q 016769 334 YNYRKGSALAILK 346 (383)
Q Consensus 334 wd~~~~~~~~~~~ 346 (383)
|++.....+.++.
T Consensus 2395 w~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2395 WRLSEFGLLHTFP 2407 (2439)
T ss_pred EEccccchhhcCc
Confidence 9998766555543
No 244
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=98.75 E-value=5.7e-07 Score=82.90 Aligned_cols=145 Identities=12% Similarity=0.167 Sum_probs=103.2
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee--cCC---
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN--LER--- 307 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~--~~~--- 307 (383)
+..++....|.-++|+.+. -+..++.....++++.+++....++.|+.+|.+..||-...+....+..... .+.
T Consensus 148 ly~~gsg~evYRlNLEqGr-fL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~ 226 (703)
T KOG2321|consen 148 LYLVGSGSEVYRLNLEQGR-FLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGD 226 (703)
T ss_pred EEEeecCcceEEEEccccc-cccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCcccc
Confidence 4455555677778888743 3555666667899999988766667777799999999876554333322211 111
Q ss_pred --CCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe-cccccceeEEEEeCC--CCEEEEEeCCCcEEEEeCC
Q 016769 308 --PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL-KYHHATCNAVSFSSD--CKLMASASEDSTVALWELY 379 (383)
Q Consensus 308 --~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~v~~spd--~~~las~s~d~~i~~w~~~ 379 (383)
..|+++.|+.+|-.+++|+.+|.+.|||+++.+++..- .+..-+|..+.|.+. ++.++|. .-.+++|||--
T Consensus 227 ~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~ 302 (703)
T KOG2321|consen 227 AAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDEC 302 (703)
T ss_pred ccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEec-chHHhhhcccc
Confidence 24899999999999999999999999999998877432 234568999999765 3455544 45678999864
No 245
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.73 E-value=0.00012 Score=66.52 Aligned_cols=268 Identities=13% Similarity=0.089 Sum_probs=142.9
Q ss_pred CeEEEeeCcccccccccccccccceeeeeeecCCCCccee-Eecc---------cCCeEEEeecCCCCCCCCCeeeeecC
Q 016769 40 GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQG---------RDGTVKCWDIENGGLSSNPSLTIKTN 109 (383)
Q Consensus 40 ~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~---------~D~ti~~Wd~~~~~~~~~~~~~~~~~ 109 (383)
++|.|-|..+.+.+..+.....+++ + ++++ ++.+ ++.+ .+..|.+||.++.+... .+..
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~~---~-~spD--g~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~----~i~~- 95 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPNP---V-VASD--GSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIA----DIEL- 95 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCce---e-ECCC--CCEEEEEeccccccccCCCCCEEEEEECccCcEEe----EEcc-
Confidence 7899999887776655443333332 2 5553 4444 4556 68999999998864211 0000
Q ss_pred ceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCC-cceEEEEec
Q 016769 110 SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQ-LSEVEIWDL 188 (383)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~i~~Wdl 188 (383)
-..|... .........++++|+ ++.++... ++.+-+.|+
T Consensus 96 ---------p~~p~~~------------------------------~~~~~~~~~ls~dgk-~l~V~n~~p~~~V~VvD~ 135 (352)
T TIGR02658 96 ---------PEGPRFL------------------------------VGTYPWMTSLTPDNK-TLLFYQFSPSPAVGVVDL 135 (352)
T ss_pred ---------CCCchhh------------------------------ccCccceEEECCCCC-EEEEecCCCCCEEEEEEC
Confidence 0000000 000011123456664 55555544 789999999
Q ss_pred CCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCce-ee---eeccccCe
Q 016769 189 NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL-TA---MKVHLEPV 264 (383)
Q Consensus 189 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~-~~---~~~h~~~v 264 (383)
.+++.+..+.-+. |..+ +...+ .. ++ .-+.||......+...+... .. +.....++
T Consensus 136 ~~~kvv~ei~vp~--------------~~~v--y~t~e-~~--~~-~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v 195 (352)
T TIGR02658 136 EGKAFVRMMDVPD--------------CYHI--FPTAN-DT--FF-MHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYL 195 (352)
T ss_pred CCCcEEEEEeCCC--------------CcEE--EEecC-Cc--cE-EEeecCceEEEEecCCCceEEeeeeeecCCcccc
Confidence 9999877765211 1111 10000 11 12 22235555444333322210 00 10000111
Q ss_pred EEE-EEeC-CCCceEEEEcCCcEEEEEccCCCCeeEEeeee--------ecCCCCeEEEEECCCCcEEEEEe--------
Q 016769 265 LCL-SIDE-SCNGGISGGADQKIVLYNLDHSTGSCVIKKEI--------NLERPGISGTSIRPDSKIAATAG-------- 326 (383)
Q Consensus 265 ~~~-~~~~-~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~--------~~~~~~i~~~~~~p~~~~l~s~~-------- 326 (383)
..- .+.+ ++..+.. +..|.|.+.|+....-........ ....++...++++|+++.+....
T Consensus 196 ~~rP~~~~~dg~~~~v-s~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~th 274 (352)
T TIGR02658 196 INHPAYSNKSGRLVWP-TYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTH 274 (352)
T ss_pred ccCCceEcCCCcEEEE-ecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccc
Confidence 110 2233 4444433 344999999875432221111110 11123344599999998766532
Q ss_pred --CCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEe-CCCcEEEEeCCC
Q 016769 327 --WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASAS-EDSTVALWELYP 380 (383)
Q Consensus 327 --~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s-~d~~i~~w~~~~ 380 (383)
..+.|.++|..+++.+..+.- ...+..++|+||++ +|.+.. .++.|.+.|...
T Consensus 275 k~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t 331 (352)
T TIGR02658 275 KTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAET 331 (352)
T ss_pred cCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcC
Confidence 225899999999999887753 34789999999999 777666 578899999753
No 246
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.69 E-value=4.2e-06 Score=79.29 Aligned_cols=132 Identities=17% Similarity=0.103 Sum_probs=86.1
Q ss_pred CcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceE-EEEcCC--cEEEEEccCCCCeeEEeeeeecCCCCeEEEEEC
Q 016769 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQ--KIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 316 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-s~~~d~--~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~ 316 (383)
..|.+||+.++.. ..+..+...+....|++++..++ +.+.++ .|.+||++..... .+..+........|+
T Consensus 214 ~~i~v~d~~~g~~--~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~-----~l~~~~~~~~~~~~s 286 (417)
T TIGR02800 214 PEIYVQDLATGQR--EKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT-----RLTNGPGIDTEPSWS 286 (417)
T ss_pred cEEEEEECCCCCE--EEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEE-----ECCCCCCCCCCEEEC
Confidence 5799999986432 22333445566788999988765 444444 4777777643211 111122223456899
Q ss_pred CCCcEEEEEeCC-C--cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCC---cEEEEeCC
Q 016769 317 PDSKIAATAGWD-R--RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS---TVALWELY 379 (383)
Q Consensus 317 p~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~---~i~~w~~~ 379 (383)
||++.|+..+.. + .|+++|+.+++.. .+..+...+...+|+|||++++.++.++ .|.+||+.
T Consensus 287 ~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~ 354 (417)
T TIGR02800 287 PDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLD 354 (417)
T ss_pred CCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCC
Confidence 999988766543 3 5777888766643 3444555677889999999999888876 77888864
No 247
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.66 E-value=4e-06 Score=79.82 Aligned_cols=132 Identities=9% Similarity=0.062 Sum_probs=85.6
Q ss_pred CCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceE-EEEcCCc--EEEEEccCCCCeeEEeeeeecCCCCeEEEEE
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQK--IVLYNLDHSTGSCVIKKEINLERPGISGTSI 315 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-s~~~d~~--i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~ 315 (383)
+..|.+||+.++. ...+..+...+....|+|++..++ +.+.++. |.+||++... .. .+..+........|
T Consensus 225 ~~~i~~~dl~~g~--~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~--~~---~Lt~~~~~~~~~~~ 297 (435)
T PRK05137 225 RPRVYLLDLETGQ--RELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT--TT---RLTDSPAIDTSPSY 297 (435)
T ss_pred CCEEEEEECCCCc--EEEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCc--eE---EccCCCCccCceeE
Confidence 5689999997643 233444555677888999998764 5566665 5556765432 11 12222233456889
Q ss_pred CCCCcEEEEEeC-CC--cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCC---cEEEEeC
Q 016769 316 RPDSKIAATAGW-DR--RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS---TVALWEL 378 (383)
Q Consensus 316 ~p~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~---~i~~w~~ 378 (383)
+|||+.|+..+. +| .|+++|+..++.. .+..+...+....|||||++|+..+.++ .|.+||+
T Consensus 298 spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~-~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~ 365 (435)
T PRK05137 298 SPDGSQIVFESDRSGSPQLYVMNADGSNPR-RISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKP 365 (435)
T ss_pred cCCCCEEEEEECCCCCCeEEEEECCCCCeE-EeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEEC
Confidence 999998887663 33 6888888765543 3333445566788999999998876543 5777776
No 248
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.65 E-value=6.1e-06 Score=78.20 Aligned_cols=184 Identities=17% Similarity=0.164 Sum_probs=103.2
Q ss_pred ccCCCCCceeeecc-CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC--
Q 016769 164 DVPAEGPKYMAVAG-EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG-- 240 (383)
Q Consensus 164 ~~~~~~~~~~~~~g-~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg-- 240 (383)
.++++++.++.+.- .....|++||+.+++.............+ .+.|+. ...+++...++
T Consensus 196 ~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~--------------~~spDg---~~l~~~~~~~~~~ 258 (417)
T TIGR02800 196 AWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAP--------------AFSPDG---SKLAVSLSKDGNP 258 (417)
T ss_pred cCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccce--------------EECCCC---CEEEEEECCCCCc
Confidence 35566654333321 12257999999887642211111000011 233332 22233444444
Q ss_pred cEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc-CC--cEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC
Q 016769 241 SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQ--KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 241 ~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~-d~--~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p 317 (383)
.|.+||+.+.. ...+..+........|++++..++..+. ++ .|.++|++... .. .+...........|+|
T Consensus 259 ~i~~~d~~~~~--~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~--~~---~l~~~~~~~~~~~~sp 331 (417)
T TIGR02800 259 DIYVMDLDGKQ--LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE--VR---RLTFRGGYNASPSWSP 331 (417)
T ss_pred cEEEEECCCCC--EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC--EE---EeecCCCCccCeEECC
Confidence 58888987643 2334344444445678888887765543 34 45566655322 11 1222334566788999
Q ss_pred CCcEEEEEeCCC---cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcE
Q 016769 318 DSKIAATAGWDR---RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTV 373 (383)
Q Consensus 318 ~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i 373 (383)
++++++.++.++ .|.+||+.++... .+... ......+|+|||++|+..+.++..
T Consensus 332 dg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~~spdg~~l~~~~~~~~~ 388 (417)
T TIGR02800 332 DGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDT-GLDESPSFAPNGRMILYATTRGGR 388 (417)
T ss_pred CCCEEEEEEccCCceEEEEEeCCCCCeE-EccCC-CCCCCceECCCCCEEEEEEeCCCc
Confidence 999999888876 8899999875533 33222 223456899999988887776543
No 249
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.65 E-value=8.8e-08 Score=82.96 Aligned_cols=145 Identities=11% Similarity=0.140 Sum_probs=103.0
Q ss_pred EEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEE
Q 016769 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGT 313 (383)
Q Consensus 234 ~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~ 313 (383)
++.+.+..|.+-|++++.. ..+. ....|..+.|...++.+..|+..|.|..+||+.+..-......--.|.+.++++
T Consensus 228 fs~G~sqqv~L~nvetg~~--qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtsl 304 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ--QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSL 304 (425)
T ss_pred ecccccceeEEEEeecccc--cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhh
Confidence 3445566788888776432 2233 345778888888788888999999999999976421111111223466778887
Q ss_pred EECC-CCcEEEEEeCCCcEEEEEcCCCce---EEEecccccceeEEE--EeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 314 SIRP-DSKIAATAGWDRRVRIYNYRKGSA---LAILKYHHATCNAVS--FSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 314 ~~~p-~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~h~~~v~~v~--~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
..-. +++++.+.+.+|+|++||++--+. +.++.||.+.-.-+- ..+....++++++|+..+||.+...
T Consensus 305 q~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~g 378 (425)
T KOG2695|consen 305 QILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSG 378 (425)
T ss_pred hhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccC
Confidence 7544 678899999999999999976555 778888876543333 3566778999999999999998643
No 250
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.65 E-value=3.8e-05 Score=70.22 Aligned_cols=132 Identities=14% Similarity=0.257 Sum_probs=88.3
Q ss_pred CCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE--cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEEC
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG--ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 316 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~--~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~ 316 (383)
...+.|++++...++. ...-.++|..++|.|....++..+ .+..+.++|++.. ..+ ......-+.+.|+
T Consensus 254 esnLyl~~~~e~~i~V--~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N---l~~----~~Pe~~rNT~~fs 324 (561)
T COG5354 254 ESNLYLLRITERSIPV--EKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN---LRF----YFPEQKRNTIFFS 324 (561)
T ss_pred cceEEEEeecccccce--eccccccceeeeecccCCceeEEecccccceeecccccc---eEE----ecCCccccccccc
Confidence 5678889887544333 334468999999988877765544 5777888888632 111 1122334678899
Q ss_pred CCCcEEEEEeCC---CcEEEEEcCCCceEE-EecccccceeEEEEeCCCCEEEEE------eCCCcEEEEeCCCC
Q 016769 317 PDSKIAATAGWD---RRVRIYNYRKGSALA-ILKYHHATCNAVSFSSDCKLMASA------SEDSTVALWELYPP 381 (383)
Q Consensus 317 p~~~~l~s~~~d---g~i~iwd~~~~~~~~-~~~~h~~~v~~v~~spd~~~las~------s~d~~i~~w~~~~~ 381 (383)
|.+++++.++.| |.|-+||........ .+.+- ...-+.|+||++++-+. -.|..|+|||++-+
T Consensus 325 p~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~--n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~ 397 (561)
T COG5354 325 PHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGL--NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGA 397 (561)
T ss_pred CcccEEEEecCCccccceEEeccCCceEEEEEeecC--CceEeeccCCceEEEecCCCcccccCcceEEEEecCc
Confidence 999999998875 578899986544332 44322 23445799999966543 34789999999743
No 251
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=98.61 E-value=1.3e-06 Score=75.34 Aligned_cols=137 Identities=15% Similarity=0.259 Sum_probs=96.4
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCce-EEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
+...+.|+.|.+|++.++. -...++....++..+.++|+++.+ .+...|-+|.+|.+.+..+.. .+..+ ..+.
T Consensus 64 lC~~yk~~~vqvwsl~Qpe-w~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~--~~~pK---~~~k 137 (447)
T KOG4497|consen 64 LCVAYKDPKVQVWSLVQPE-WYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL--LPHPK---TNVK 137 (447)
T ss_pred eeeeeccceEEEEEeecce-eEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE--ecccc---cCce
Confidence 4456889999999998754 356677777889999999999764 566778999999998654432 22222 3467
Q ss_pred EEEECCCCcEEEEEeCCC------------------------------------cEEEEEcCCCceEEEecccc-cceeE
Q 016769 312 GTSIRPDSKIAATAGWDR------------------------------------RVRIYNYRKGSALAILKYHH-ATCNA 354 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg------------------------------------~i~iwd~~~~~~~~~~~~h~-~~v~~ 354 (383)
.++|+|||++.+..+.-. .+.+||--- .++.+.+|. -.+..
T Consensus 138 g~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~L--eykv~aYe~~lG~k~ 215 (447)
T KOG4497|consen 138 GYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVL--EYKVYAYERGLGLKF 215 (447)
T ss_pred eEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchh--hheeeeeeeccceeE
Confidence 889999999887766422 122222211 112233444 35889
Q ss_pred EEEeCCCCEEEEEeCCCcEEEEe
Q 016769 355 VSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 355 v~~spd~~~las~s~d~~i~~w~ 377 (383)
++|+|-+++||.|+.|+++|+-|
T Consensus 216 v~wsP~~qflavGsyD~~lrvln 238 (447)
T KOG4497|consen 216 VEWSPCNQFLAVGSYDQMLRVLN 238 (447)
T ss_pred EEeccccceEEeeccchhhhhhc
Confidence 99999999999999999998754
No 252
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=98.60 E-value=2.4e-07 Score=95.44 Aligned_cols=172 Identities=14% Similarity=0.248 Sum_probs=119.4
Q ss_pred eccCCcceEEEEecCCCCeeeEeccC--cCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 175 VAGEQLSEVEIWDLNTAERCTRLHQN--SCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 175 ~~g~~~~~i~~Wdl~~~~~~~~~~~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
++|++|+.+++|.-..++.+...... ..+....|. .+|.+ ..++-.||.+.+|... ..
T Consensus 2224 ltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~-----------------~qGnk-~~i~d~dg~l~l~q~~--pk 2283 (2439)
T KOG1064|consen 2224 LTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFN-----------------HQGNK-FGIVDGDGDLSLWQAS--PK 2283 (2439)
T ss_pred EecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhc-----------------ccCCc-eeeeccCCceeecccC--Cc
Confidence 46788999999998888866554321 111111111 12222 3345569999999976 34
Q ss_pred ceeeeeccccCeEEEEEeCCCCceEEEE---cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC
Q 016769 253 PLTAMKVHLEPVLCLSIDESCNGGISGG---ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR 329 (383)
Q Consensus 253 ~~~~~~~h~~~v~~~~~~~~~~~~~s~~---~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg 329 (383)
+...-+.|......+.|-.+ .+++.+ .++.+.+||-......... ...|.++.+++++-|..+.+++||.+|
T Consensus 2284 ~~~s~qchnk~~~Df~Fi~s--~~~tag~s~d~~n~~lwDtl~~~~~s~v---~~~H~~gaT~l~~~P~~qllisggr~G 2358 (2439)
T KOG1064|consen 2284 PYTSWQCHNKALSDFRFIGS--LLATAGRSSDNRNVCLWDTLLPPMNSLV---HTCHDGGATVLAYAPKHQLLISGGRKG 2358 (2439)
T ss_pred ceeccccCCccccceeeeeh--hhhccccCCCCCcccchhcccCccccee---eeecCCCceEEEEcCcceEEEecCCcC
Confidence 56666778776666666443 234433 4677999997654433322 367889999999999999999999999
Q ss_pred cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 330 RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
.|.+||++..+.+.+++. +. ...++++|+..|.|+||++..+
T Consensus 2359 ~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2359 EVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEF 2400 (2439)
T ss_pred cEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEcccc
Confidence 999999987766655543 34 4468999999999999999744
No 253
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.58 E-value=1.6e-06 Score=74.37 Aligned_cols=69 Identities=17% Similarity=0.284 Sum_probs=51.2
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEcCC-CceEEEeccccc------------ce---eEEEEeCCCCEEEEEeCCC
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRK-GSALAILKYHHA------------TC---NAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~h~~------------~v---~~v~~spd~~~las~s~d~ 371 (383)
.+|+.+.|+++|+|+++-+. -+++|||..- ..+++++.-|.. .| ..+.||.|.+.+.+||..+
T Consensus 281 sSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~N 359 (460)
T COG5170 281 SSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSN 359 (460)
T ss_pred hhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEEEecCCccccccccccc
Confidence 45788999999999987554 4899999953 566777654532 22 4567999999999999887
Q ss_pred cEEEEe
Q 016769 372 TVALWE 377 (383)
Q Consensus 372 ~i~~w~ 377 (383)
.--++-
T Consensus 360 Nfgiyp 365 (460)
T COG5170 360 NFGIYP 365 (460)
T ss_pred ceeeec
Confidence 665553
No 254
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.54 E-value=2.2e-05 Score=66.20 Aligned_cols=185 Identities=15% Similarity=0.079 Sum_probs=119.5
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCC----CceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKG----RGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
.++.|+..+...+|...+.+...++-.. +..+ +-.|.. ...+..++.|.++++.++.
T Consensus 86 ~la~gG~~g~fd~~~~~tn~~h~~~cd~--------snn~v~~~~r~cd~-----------~~~~~i~sndht~k~~~~~ 146 (344)
T KOG4532|consen 86 TLADGGASGQFDLFACNTNDGHLYQCDV--------SNNDVTLVKRYCDL-----------KFPLNIASNDHTGKTMVVS 146 (344)
T ss_pred EEEeccccceeeeecccCcccceeeecc--------cccchhhhhhhccc-----------ccceeeccCCcceeEEEEe
Confidence 3455666789999999876643322110 0111 111110 1136678899999999886
Q ss_pred CCCCceeeeeccccC--eEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe
Q 016769 249 NPGIPLTAMKVHLEP--VLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG 326 (383)
Q Consensus 249 ~~~~~~~~~~~h~~~--v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~ 326 (383)
-... ....|... +..+.++++...+++.+....|.+|.++........... ......-.+.+|+.....+|++.
T Consensus 147 ~~s~---~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~-a~t~D~gF~~S~s~~~~~FAv~~ 222 (344)
T KOG4532|consen 147 GDSN---KFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYE-APTSDHGFYNSFSENDLQFAVVF 222 (344)
T ss_pred cCcc---cceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEe-cccCCCceeeeeccCcceEEEEe
Confidence 4321 22334443 677888999888888888999999999865533322112 22233456788998888999999
Q ss_pred CCCcEEEEEcCCCce-E----EEecccccceeEEEEeCCCC--EEEEEeCCCcEEEEeCCC
Q 016769 327 WDRRVRIYNYRKGSA-L----AILKYHHATCNAVSFSSDCK--LMASASEDSTVALWELYP 380 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~-~----~~~~~h~~~v~~v~~spd~~--~las~s~d~~i~~w~~~~ 380 (383)
.||++.|||++.... + .+-..|.+.+..+.|+|-|. +|...=.=+.+.+-|+..
T Consensus 223 Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~ 283 (344)
T KOG4532|consen 223 QDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRN 283 (344)
T ss_pred cCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEccc
Confidence 999999999976432 2 22234888999999998664 444444445677777653
No 255
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.53 E-value=1.5e-06 Score=76.84 Aligned_cols=75 Identities=21% Similarity=0.362 Sum_probs=63.5
Q ss_pred cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe-cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 305 LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 305 ~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.|.+.+..++++||+++|+++..|..||+-.......+..+ .||++-|..++.-+ +..|+|||.|+++++||+..
T Consensus 149 GhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~-~~~LlS~sGD~tlr~Wd~~s 224 (390)
T KOG3914|consen 149 GHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTD-NYLLLSGSGDKTLRLWDITS 224 (390)
T ss_pred hhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeecc-CceeeecCCCCcEEEEeccc
Confidence 45567899999999999999999999999888665555444 47999999999865 56799999999999999853
No 256
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.49 E-value=3.9e-05 Score=72.58 Aligned_cols=135 Identities=16% Similarity=0.140 Sum_probs=79.5
Q ss_pred cEEEEeCCCC--CCceeeeeccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccC--CCCeeEEeeeeecCCCCeEEEEE
Q 016769 241 SILVWDIRNP--GIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDH--STGSCVIKKEINLERPGISGTSI 315 (383)
Q Consensus 241 ~i~~wdl~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~--~~~~~~~~~~~~~~~~~i~~~~~ 315 (383)
.+.+|++... +.+......+........|+|++..++..+ .++...+|.++. ..+.. ..+......+....|
T Consensus 258 ~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~---~~lt~~~~~~~~p~w 334 (428)
T PRK01029 258 FIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSP---RLLTKKYRNSSCPAW 334 (428)
T ss_pred eEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccce---EEeccCCCCccceeE
Confidence 3455776542 222222222223335678999998776544 466666664432 22111 112222234567889
Q ss_pred CCCCcEEEEEeCC---CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeC---CCcEEEEeCC
Q 016769 316 RPDSKIAATAGWD---RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE---DSTVALWELY 379 (383)
Q Consensus 316 ~p~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~---d~~i~~w~~~ 379 (383)
+|||+.|+..+.+ ..|.+||+.+++... +......+....|+|||++|+..+. ...|.+||+.
T Consensus 335 SPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~ 403 (428)
T PRK01029 335 SPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLI 403 (428)
T ss_pred CCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 9999988866543 469999998887543 3223345677899999998775433 3457777764
No 257
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=98.48 E-value=7.4e-06 Score=69.80 Aligned_cols=143 Identities=15% Similarity=0.132 Sum_probs=96.2
Q ss_pred EEEEeCCCcEEEEeCCCCCC--ceeeeecc---ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee--eeec
Q 016769 233 VLAGYEDGSILVWDIRNPGI--PLTAMKVH---LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK--EINL 305 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~--~~~~~~~h---~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~--~~~~ 305 (383)
++-+..+|.|.++....... .+..+..- .....++.|+..+..++++-.+|.+..-+... . .+.+ ..+.
T Consensus 88 l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~---~-~le~vq~wk~ 163 (339)
T KOG0280|consen 88 LLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETE---M-VLEKVQTWKV 163 (339)
T ss_pred eeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecce---e-eeeecccccc
Confidence 44566688888886532110 01111111 11234667788777888888888887554322 1 1222 4566
Q ss_pred CCCCeEEEEECC-CCcEEEEEeCCCcEEEEEcC-CCceEEE-ecccccceeEEEEeCC-CCEEEEEeCCCcEEEEeCC
Q 016769 306 ERPGISGTSIRP-DSKIAATAGWDRRVRIYNYR-KGSALAI-LKYHHATCNAVSFSSD-CKLMASASEDSTVALWELY 379 (383)
Q Consensus 306 ~~~~i~~~~~~p-~~~~l~s~~~dg~i~iwd~~-~~~~~~~-~~~h~~~v~~v~~spd-~~~las~s~d~~i~~w~~~ 379 (383)
|+.++....|+- +.+.+.+|+.|+.+.-||++ .++.+.. .+-|...|.+|.-+|. +.++++|+.|-+|++||..
T Consensus 164 He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtR 241 (339)
T KOG0280|consen 164 HEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTR 241 (339)
T ss_pred cceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehh
Confidence 777777788863 45789999999999999998 4455544 4568888999988864 5599999999999999975
No 258
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.48 E-value=4.9e-05 Score=72.32 Aligned_cols=188 Identities=17% Similarity=0.183 Sum_probs=100.8
Q ss_pred ccCCCCCceeeeccCC-cceEEEEecCCCCeeeEecc-CcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC-
Q 016769 164 DVPAEGPKYMAVAGEQ-LSEVEIWDLNTAERCTRLHQ-NSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG- 240 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~-~~~i~~Wdl~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg- 240 (383)
.++++|++++.++-.. ...|.+||+.+++.. .+.. ......+ .+.|+ +...+++...++
T Consensus 205 ~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~-~l~~~~g~~~~~--------------~~SpD---G~~la~~~~~~g~ 266 (430)
T PRK00178 205 RWSPDGKRIAYVSFEQKRPRIFVQNLDTGRRE-QITNFEGLNGAP--------------AWSPD---GSKLAFVLSKDGN 266 (430)
T ss_pred eECCCCCEEEEEEcCCCCCEEEEEECCCCCEE-EccCCCCCcCCe--------------EECCC---CCEEEEEEccCCC
Confidence 4557776544443221 246899999887632 2211 1000111 23333 222233444444
Q ss_pred -cEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE-cCCc--EEEEEccCCCCeeEEeeeeecCCCCeEEEEEC
Q 016769 241 -SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQK--IVLYNLDHSTGSCVIKKEINLERPGISGTSIR 316 (383)
Q Consensus 241 -~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~~--i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~ 316 (383)
.|.+||+.++. ...+..+........|++++..++..+ .++. |.++|+....... + ...........|+
T Consensus 267 ~~Iy~~d~~~~~--~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-l----t~~~~~~~~~~~S 339 (430)
T PRK00178 267 PEIYVMDLASRQ--LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-V----TFVGNYNARPRLS 339 (430)
T ss_pred ceEEEEECCCCC--eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-e----ecCCCCccceEEC
Confidence 68888987643 233444444455677889888765444 3444 5556665433111 1 1111223456799
Q ss_pred CCCcEEEEEeCCC---cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCC-Cc--EEEEeC
Q 016769 317 PDSKIAATAGWDR---RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED-ST--VALWEL 378 (383)
Q Consensus 317 p~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d-~~--i~~w~~ 378 (383)
||+++++..+.++ .|.++|+.+++.. .+. +........|+|||++++..+.+ +. +.++++
T Consensus 340 pdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt-~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~ 405 (430)
T PRK00178 340 ADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILT-DTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSI 405 (430)
T ss_pred CCCCEEEEEEccCCceEEEEEECCCCCEE-Ecc-CCCCCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence 9999988776543 5888899877643 222 11122345899999988776654 33 444444
No 259
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.47 E-value=0.00025 Score=66.26 Aligned_cols=134 Identities=14% Similarity=0.119 Sum_probs=81.1
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.++.++.+|.+..||++++.. +-... . .......+ .+..++.++.|+.+..+|.... ....... ........
T Consensus 243 ~vy~~~~~g~l~a~d~~tG~~-~W~~~-~-~~~~~p~~--~~~~vyv~~~~G~l~~~d~~tG--~~~W~~~-~~~~~~~s 314 (377)
T TIGR03300 243 QVYAVSYQGRVAALDLRSGRV-LWKRD-A-SSYQGPAV--DDNRLYVTDADGVVVALDRRSG--SELWKND-ELKYRQLT 314 (377)
T ss_pred EEEEEEcCCEEEEEECCCCcE-EEeec-c-CCccCceE--eCCEEEEECCCCeEEEEECCCC--cEEEccc-cccCCccc
Confidence 466778899999999987432 21111 1 11111222 2345677788999999988644 2222211 11111112
Q ss_pred EEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 312 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
...+ .+..+++++.||.++++|..+++.+..++-+...+..--...++ .|..++.||.|..|
T Consensus 315 sp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~-~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 315 APAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVVGD-GLLVQTRDGDLYAF 376 (377)
T ss_pred cCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEECC-EEEEEeCCceEEEe
Confidence 2222 35578889999999999999999998887655443322122243 57789999998876
No 260
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.47 E-value=0.00037 Score=63.31 Aligned_cols=108 Identities=15% Similarity=0.182 Sum_probs=67.1
Q ss_pred EEEEEeCCCcEEEEeCCCCCC----ceeeeecc-------ccCeEEEEEeCCCCceEEEE----------cCCcEEEEEc
Q 016769 232 NVLAGYEDGSILVWDIRNPGI----PLTAMKVH-------LEPVLCLSIDESCNGGISGG----------ADQKIVLYNL 290 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~----~~~~~~~h-------~~~v~~~~~~~~~~~~~s~~----------~d~~i~~wdl 290 (383)
.+...++ |+|.+.|+..... +...+... -....-+++++++..++... ..+.|.++|.
T Consensus 208 ~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~ 286 (352)
T TIGR02658 208 LVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDA 286 (352)
T ss_pred EEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEEC
Confidence 3444444 9999999754321 11111110 11233488888888776632 1245777776
Q ss_pred cCCCCeeEEeeeeecCCCCeEEEEECCCCc-EEEEEe-CCCcEEEEEcCCCceEEEe
Q 016769 291 DHSTGSCVIKKEINLERPGISGTSIRPDSK-IAATAG-WDRRVRIYNYRKGSALAIL 345 (383)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~ 345 (383)
... .... .+.. ...+..++|+||++ .+.+.. .++.|.++|..+++.+..+
T Consensus 287 ~t~--kvi~--~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 287 KTG--KRLR--KIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred CCC--eEEE--EEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 533 3222 2222 24688999999999 777666 5788999999999998877
No 261
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.42 E-value=8.9e-05 Score=70.72 Aligned_cols=190 Identities=19% Similarity=0.207 Sum_probs=98.8
Q ss_pred ccCCCCCceeeeccCC-cceEEEEecCCCCeeeEecc-CcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCc
Q 016769 164 DVPAEGPKYMAVAGEQ-LSEVEIWDLNTAERCTRLHQ-NSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS 241 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~-~~~i~~Wdl~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~ 241 (383)
.++++|++++.++... ...|.+||+.+++.. .+.. ......+ .+.|+. ...+++...++.
T Consensus 224 ~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~-~lt~~~g~~~~~--------------~wSPDG---~~La~~~~~~g~ 285 (448)
T PRK04792 224 AWSPDGRKLAYVSFENRKAEIFVQDIYTQVRE-KVTSFPGINGAP--------------RFSPDG---KKLALVLSKDGQ 285 (448)
T ss_pred eECCCCCEEEEEEecCCCcEEEEEECCCCCeE-EecCCCCCcCCe--------------eECCCC---CEEEEEEeCCCC
Confidence 3557776554443221 236889999887632 2211 1000111 234432 223344555665
Q ss_pred --EEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCC
Q 016769 242 --ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD 318 (383)
Q Consensus 242 --i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 318 (383)
|.++|+.++. ...+..+........|++++..++..+ .++...+|-++..++.... +..........+|+||
T Consensus 286 ~~Iy~~dl~tg~--~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~---Lt~~g~~~~~~~~SpD 360 (448)
T PRK04792 286 PEIYVVDIATKA--LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR---LTFEGEQNLGGSITPD 360 (448)
T ss_pred eEEEEEECCCCC--eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE---EecCCCCCcCeeECCC
Confidence 7777877532 334444444456678899888765443 3455455443322222211 1112222345689999
Q ss_pred CcEEEEEeC-CC--cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCC-Cc--EEEEeC
Q 016769 319 SKIAATAGW-DR--RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED-ST--VALWEL 378 (383)
Q Consensus 319 ~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d-~~--i~~w~~ 378 (383)
|++++..+. ++ .|.++|+.+++.. .+.... ......|+|||++|+..+.+ +. +.+++.
T Consensus 361 G~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~~-~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~ 424 (448)
T PRK04792 361 GRSMIMVNRTNGKFNIARQDLETGAMQ-VLTSTR-LDESPSVAPNGTMVIYSTTYQGKQVLAAVSI 424 (448)
T ss_pred CCEEEEEEecCCceEEEEEECCCCCeE-EccCCC-CCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence 998877655 34 4555687777643 232221 12234799999987765544 33 444554
No 262
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=98.40 E-value=3.3e-06 Score=80.28 Aligned_cols=145 Identities=20% Similarity=0.265 Sum_probs=94.1
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCC-CCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDES-CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
++++.+..+.|++||++.+..++..++.|...|..+.|... ...+++++.|++++.||.+..+...... ......+
T Consensus 172 ~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~---vtt~~pi 248 (1081)
T KOG0309|consen 172 NVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRT---VTTNFPI 248 (1081)
T ss_pred chhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccccccee---ccccCcc
Confidence 35566677889999999999999999999999999988543 2346889999999999987654322111 1111233
Q ss_pred EEEEECCCCc-EEEEEe-CCCcEEE---------EEcC-CCceEEEecccccceeEEEEeC--------CCC--EEEEEe
Q 016769 311 SGTSIRPDSK-IAATAG-WDRRVRI---------YNYR-KGSALAILKYHHATCNAVSFSS--------DCK--LMASAS 368 (383)
Q Consensus 311 ~~~~~~p~~~-~l~s~~-~dg~i~i---------wd~~-~~~~~~~~~~h~~~v~~v~~sp--------d~~--~las~s 368 (383)
.--.+-|-|. +++.-. .+..+.+ |+.. ..+++.++.||...|...-|-- |.+ .|+|=|
T Consensus 249 w~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWS 328 (1081)
T KOG0309|consen 249 WRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWS 328 (1081)
T ss_pred eeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEee
Confidence 3334444332 111111 1112223 3332 2467889999998886554422 333 799999
Q ss_pred CCCcEEEEeCC
Q 016769 369 EDSTVALWELY 379 (383)
Q Consensus 369 ~d~~i~~w~~~ 379 (383)
.|..+++|-+.
T Consensus 329 kD~~lrlWpI~ 339 (1081)
T KOG0309|consen 329 KDQTLRLWPID 339 (1081)
T ss_pred cCCceEeeecc
Confidence 99999999875
No 263
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.40 E-value=0.00046 Score=64.47 Aligned_cols=265 Identities=15% Similarity=0.098 Sum_probs=141.5
Q ss_pred CCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeec
Q 016769 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKT 108 (383)
Q Consensus 29 ~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~ 108 (383)
.+..|+.++.++.|.-+|..+++.+=...... .+. -.|..++..++.++.|+.+..+|.++|+.. +....
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~---~~~---~~p~v~~~~v~v~~~~g~l~ald~~tG~~~----W~~~~ 133 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDE---RLS---GGVGADGGLVFVGTEKGEVIALDAEDGKEL----WRAKL 133 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCC---Ccc---cceEEcCCEEEEEcCCCEEEEEECCCCcEe----eeecc
Confidence 35688999999999999988876542211111 111 111123467778888999999999887521 10000
Q ss_pred CceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEec
Q 016769 109 NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDL 188 (383)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl 188 (383)
. .. .. .... ..+.. +++ +..++.+..||.
T Consensus 134 ~-----------~~---------------------~~------------~~p~-----v~~~~-v~v-~~~~g~l~a~d~ 162 (377)
T TIGR03300 134 S-----------SE---------------------VL------------SPPL-----VANGL-VVV-RTNDGRLTALDA 162 (377)
T ss_pred C-----------ce---------------------ee------------cCCE-----EECCE-EEE-ECCCCeEEEEEc
Confidence 0 00 00 0000 01112 222 344678999999
Q ss_pred CCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCcee-eee---ccc--c
Q 016769 189 NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT-AMK---VHL--E 262 (383)
Q Consensus 189 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~-~~~---~h~--~ 262 (383)
++++.+-+........ ... .....+ . .. ..++.+..++.+..+|++++...-. ... ... .
T Consensus 163 ~tG~~~W~~~~~~~~~--~~~----~~~sp~--~----~~--~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~ 228 (377)
T TIGR03300 163 ATGERLWTYSRVTPAL--TLR----GSASPV--I----AD--GGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELE 228 (377)
T ss_pred CCCceeeEEccCCCce--eec----CCCCCE--E----EC--CEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchh
Confidence 9988766554221000 000 000000 0 01 1366777888999999876532110 000 000 0
Q ss_pred C---e-EEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC
Q 016769 263 P---V-LCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 263 ~---v-~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~ 338 (383)
. + ....+. +..++.++.++.+..+|.+.. ........ ....... .++..+..++.||.+..+|..+
T Consensus 229 ~~~~~~~~p~~~--~~~vy~~~~~g~l~a~d~~tG--~~~W~~~~----~~~~~p~--~~~~~vyv~~~~G~l~~~d~~t 298 (377)
T TIGR03300 229 RLVDVDGDPVVD--GGQVYAVSYQGRVAALDLRSG--RVLWKRDA----SSYQGPA--VDDNRLYVTDADGVVVALDRRS 298 (377)
T ss_pred hhhccCCccEEE--CCEEEEEEcCCEEEEEECCCC--cEEEeecc----CCccCce--EeCCEEEEECCCCeEEEEECCC
Confidence 0 0 011112 245677788999999998643 33222211 1112222 2455677788999999999999
Q ss_pred CceEEEecccccc-eeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 339 GSALAILKYHHAT-CNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 339 ~~~~~~~~~h~~~-v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
++.+......... ..+... .+..|..++.||.|.++|...
T Consensus 299 G~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~t 339 (377)
T TIGR03300 299 GSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSRED 339 (377)
T ss_pred CcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCC
Confidence 9887654221111 122122 456888899999999998753
No 264
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=98.40 E-value=7.5e-05 Score=64.82 Aligned_cols=70 Identities=16% Similarity=0.205 Sum_probs=49.9
Q ss_pred CeEEEEECCCCcEEEEEeC--CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 309 GISGTSIRPDSKIAATAGW--DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++.-++|++|..|+++-.. -..+-+||+...+....+ -...+|....|.|....|+.+.....+++|...
T Consensus 320 g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avL-iQk~piraf~WdP~~prL~vctg~srLY~W~ps 391 (447)
T KOG4497|consen 320 GAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVL-IQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPS 391 (447)
T ss_pred ccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhh-hhccceeEEEeCCCCceEEEEcCCceEEEEcCC
Confidence 3567899999988775432 236788999876655433 245678889999988777776666668888764
No 265
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.38 E-value=0.00022 Score=66.11 Aligned_cols=127 Identities=13% Similarity=0.240 Sum_probs=83.8
Q ss_pred CcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE---cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEEC
Q 016769 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG---ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 316 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~---~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~ 316 (383)
..+.|+.|+....|+..... .++|...+|.|.++.++.-+ ...++.+|-++.......+.+.+ .....+.+.++
T Consensus 425 ~n~eIfrireKdIpve~vel-ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~--dk~~~N~vfws 501 (698)
T KOG2314|consen 425 SNLEIFRIREKDIPVEVVEL-KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKEL--DKKFANTVFWS 501 (698)
T ss_pred eeEEEEEeeccCCCceeeec-chheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhh--cccccceEEEc
Confidence 35788888876666655432 46889999999998765432 24567888776433333222222 22357889999
Q ss_pred CCCcEEEEEe---CCCcEEEEEcCCC--ceEEEecccccceeEEEEeCCCCEEEEEeCCC
Q 016769 317 PDSKIAATAG---WDRRVRIYNYRKG--SALAILKYHHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 317 p~~~~l~s~~---~dg~i~iwd~~~~--~~~~~~~~h~~~v~~v~~spd~~~las~s~d~ 371 (383)
|-|++++.+. ..|.+..+|+... +.... .-|.. -+-+.|.|.|+|++++|.-.
T Consensus 502 PkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~-~eh~~-at~veWDPtGRYvvT~ss~w 559 (698)
T KOG2314|consen 502 PKGRFVVVAALVSRRGDLEFYDTDYADLKDTAS-PEHFA-ATEVEWDPTGRYVVTSSSSW 559 (698)
T ss_pred CCCcEEEEEEecccccceEEEecchhhhhhccC-ccccc-cccceECCCCCEEEEeeehh
Confidence 9999987765 4788999999742 22211 12443 46678999999999987543
No 266
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.38 E-value=5.8e-06 Score=74.35 Aligned_cols=144 Identities=15% Similarity=0.180 Sum_probs=95.0
Q ss_pred EEeCCCcEEEEeCCCCCC-ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccC----CCCeeEEee-------e
Q 016769 235 AGYEDGSILVWDIRNPGI-PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH----STGSCVIKK-------E 302 (383)
Q Consensus 235 sg~~dg~i~~wdl~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~----~~~~~~~~~-------~ 302 (383)
+...++.|.++|-+...+ ....-+.|..||.++.+.+.++..++....|.|.-|..+. +.....+.. .
T Consensus 117 s~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~ 196 (558)
T KOG0882|consen 117 SLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYG 196 (558)
T ss_pred ecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhc
Confidence 345577788888655442 3344467999999999999999888888889999998762 111110100 0
Q ss_pred eecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe--------------------------------ccccc
Q 016769 303 INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL--------------------------------KYHHA 350 (383)
Q Consensus 303 ~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------------------------~~h~~ 350 (383)
.........++.|+|++..+..-+.|.+|++|+..+++.+..+ ..|..
T Consensus 197 f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~ 276 (558)
T KOG0882|consen 197 FPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGS 276 (558)
T ss_pred ccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcC
Confidence 1112234678999999999999999999999999887542211 11111
Q ss_pred c-eeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 351 T-CNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 351 ~-v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
. -..+.|.-.|++|..|+-=| |++.++.
T Consensus 277 ~~~~~~~fdes~~flly~t~~g-ikvin~~ 305 (558)
T KOG0882|consen 277 TVGTNAVFDESGNFLLYGTILG-IKVINLD 305 (558)
T ss_pred cccceeEEcCCCCEEEeeccee-EEEEEee
Confidence 1 13345777788888887655 6776663
No 267
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.36 E-value=0.0016 Score=57.63 Aligned_cols=289 Identities=11% Similarity=0.110 Sum_probs=153.9
Q ss_pred ecCCceeeEEEeCCCCeEEEecCC---CeEEEeeCcc--cccccccccccccceeeeeeecCCCCcceeEecc-cCCeEE
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTG---GELRIWDTVQ--HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG-RDGTVK 89 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D---~~v~vW~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~D~ti~ 89 (383)
.+.+..+-|+|+|+++.|+++-.+ |.|--+.... ++....-.....+..-..++.++ +++.|+++. .-+.|.
T Consensus 37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~--~g~~vf~AnY~~g~v~ 114 (346)
T COG2706 37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDE--DGRFVFVANYHSGSVS 114 (346)
T ss_pred cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECC--CCCEEEEEEccCceEE
Confidence 445666788999999999998776 5666666543 33322111111122224556665 356777664 558899
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+..+++...+..+...+. .........+... -.-...+.+++
T Consensus 115 v~p~~~dG~l~~~v~~~~-----------h~g~~p~~rQ~~~---------------------------h~H~a~~tP~~ 156 (346)
T COG2706 115 VYPLQADGSLQPVVQVVK-----------HTGSGPHERQESP---------------------------HVHSANFTPDG 156 (346)
T ss_pred EEEcccCCccccceeeee-----------cCCCCCCccccCC---------------------------ccceeeeCCCC
Confidence 998865322211111100 0000000000000 00011223444
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
+++++..=....|.+++++.+... ...+... .++.+=+- ..|.|+. ....+++--+++|.+|+...
T Consensus 157 -~~l~v~DLG~Dri~~y~~~dg~L~-~~~~~~v-------~~G~GPRH--i~FHpn~---k~aY~v~EL~stV~v~~y~~ 222 (346)
T COG2706 157 -RYLVVPDLGTDRIFLYDLDDGKLT-PADPAEV-------KPGAGPRH--IVFHPNG---KYAYLVNELNSTVDVLEYNP 222 (346)
T ss_pred -CEEEEeecCCceEEEEEcccCccc-ccccccc-------CCCCCcce--EEEcCCC---cEEEEEeccCCEEEEEEEcC
Confidence 455555322347899999865532 1111100 11111111 1255542 22345567789999999876
Q ss_pred CCCceeeeecc---------ccCeEEEEEeCCCCceEEEEc-CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC
Q 016769 250 PGIPLTAMKVH---------LEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319 (383)
Q Consensus 250 ~~~~~~~~~~h---------~~~v~~~~~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 319 (383)
....+..++.+ ......+.++++++.|.++.. ...|.++.++..++...+......+....+.+.|+|++
T Consensus 223 ~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g 302 (346)
T COG2706 223 AVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSG 302 (346)
T ss_pred CCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCC
Confidence 43223333321 123456777999988876653 45788999987777655544444444457889999999
Q ss_pred cEEEEEeC-CCcEEEEEcC--CCceEEEec-ccccceeEEEEe
Q 016769 320 KIAATAGW-DRRVRIYNYR--KGSALAILK-YHHATCNAVSFS 358 (383)
Q Consensus 320 ~~l~s~~~-dg~i~iwd~~--~~~~~~~~~-~h~~~v~~v~~s 358 (383)
++|+++.. ...|.+|.++ +|+.-.... .+.....||.|.
T Consensus 303 ~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~ 345 (346)
T COG2706 303 RFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL 345 (346)
T ss_pred CEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence 99888875 4478888774 454332222 123334566664
No 268
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.33 E-value=4.5e-06 Score=72.55 Aligned_cols=120 Identities=19% Similarity=0.254 Sum_probs=81.5
Q ss_pred ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec----CCCCeEEEEECCCC-cEEEEEeCCCcEEE
Q 016769 259 VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL----ERPGISGTSIRPDS-KIAATAGWDRRVRI 333 (383)
Q Consensus 259 ~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~----~~~~i~~~~~~p~~-~~l~s~~~dg~i~i 333 (383)
+|.--++++++..+...++++ .|=+|.+|+++......-+.-.... -..-|++..|+|.. +.++=.++-|+|++
T Consensus 162 aHtyhiNSIS~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrL 240 (433)
T KOG1354|consen 162 AHTYHINSISVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRL 240 (433)
T ss_pred cceeEeeeeeecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEE
Confidence 466678899998888777765 6778999999865554433211111 11237788899864 56677788999999
Q ss_pred EEcCCCc-------eE---------EEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 334 YNYRKGS-------AL---------AILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 334 wd~~~~~-------~~---------~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
-|++... .. .-+..--..|..+.|+++|+++.+=.. .+|++||+.+
T Consensus 241 cDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nm 302 (433)
T KOG1354|consen 241 CDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNM 302 (433)
T ss_pred eechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccc
Confidence 9997321 10 111222346788999999999976443 5899999943
No 269
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.29 E-value=0.00016 Score=75.67 Aligned_cols=147 Identities=8% Similarity=0.107 Sum_probs=98.1
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeec---------------cccCeEEEEEeCCCCceE-EEEcCCcEEEEEccCCCC
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKV---------------HLEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTG 295 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~---------------h~~~v~~~~~~~~~~~~~-s~~~d~~i~~wdl~~~~~ 295 (383)
..++.+.++.|++||..+... ..+.+ .......+++++++..++ +-+.++.|++||++....
T Consensus 697 LyVad~~~~~I~v~d~~~g~v--~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~ 774 (1057)
T PLN02919 697 VYIAMAGQHQIWEYNISDGVT--RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGS 774 (1057)
T ss_pred EEEEECCCCeEEEEECCCCeE--EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcE
Confidence 456777889999999865321 11111 112345688999887554 445678999999875331
Q ss_pred eeEEe------eee-ec----------CCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEec------------
Q 016769 296 SCVIK------KEI-NL----------ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK------------ 346 (383)
Q Consensus 296 ~~~~~------~~~-~~----------~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------ 346 (383)
....- ... .. .-....+++++++|+.+++-+.+++|++||..++.......
T Consensus 775 ~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~ 854 (1057)
T PLN02919 775 RLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKAL 854 (1057)
T ss_pred EEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCccc
Confidence 11100 000 00 01124688999999999999999999999998776542221
Q ss_pred -ccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 347 -YHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 347 -~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+.-.....++++|+|+.+++-+.++.|++||+..
T Consensus 855 ~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~ 889 (1057)
T PLN02919 855 KAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNK 889 (1057)
T ss_pred ccccCCceEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence 1223567899999999999999999999999854
No 270
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.28 E-value=1.5e-06 Score=72.68 Aligned_cols=139 Identities=21% Similarity=0.263 Sum_probs=88.0
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEE-----EEeCCCCceEEE-----EcCCcEEEEEccCCCCeeEEee
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCL-----SIDESCNGGISG-----GADQKIVLYNLDHSTGSCVIKK 301 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~-----~~~~~~~~~~s~-----~~d~~i~~wdl~~~~~~~~~~~ 301 (383)
.+++++.||.+-+++.++.... .|..++..+ .+...+..+.++ ..-+..+.|+++........
T Consensus 103 ~V~~~~~dg~~~v~s~~~~~~~-----~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~-- 175 (319)
T KOG4714|consen 103 RVCIGYADGSLAVFSTDKDLAL-----MSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPS-- 175 (319)
T ss_pred ceEecCCCceEEEEechHHHhh-----hhhcccccccccccceeecccEEecCCcceEeeccceeeeccccccccccc--
Confidence 4788999999999987652111 112222111 111111112221 12334566776543211111
Q ss_pred eeecCCCCeEEEEECCCC-cEEEEEeCCCcEEEEEcCCCc-eEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeC
Q 016769 302 EINLERPGISGTSIRPDS-KIAATAGWDRRVRIYNYRKGS-ALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWEL 378 (383)
Q Consensus 302 ~~~~~~~~i~~~~~~p~~-~~l~s~~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~ 378 (383)
+.....+.+++-+|.. +.+++|+.||-+.+||.+... +...++.|+.+++-|-|+|... .|+++++||.+--||.
T Consensus 176 --~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wda 253 (319)
T KOG4714|consen 176 --KKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDA 253 (319)
T ss_pred --ccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcC
Confidence 1122348888888865 578889999999999997753 3356788999999999999654 9999999999999987
Q ss_pred C
Q 016769 379 Y 379 (383)
Q Consensus 379 ~ 379 (383)
.
T Consensus 254 s 254 (319)
T KOG4714|consen 254 S 254 (319)
T ss_pred C
Confidence 5
No 271
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.26 E-value=5e-05 Score=70.63 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=83.4
Q ss_pred eEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEE
Q 016769 276 GISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAV 355 (383)
Q Consensus 276 ~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v 355 (383)
++.|...|.|-+|+...... ..+.....+.+.++++..+.+-..|.+++.|+.+-.|+....+.+..++..+..+.++
T Consensus 73 lvlgt~~g~v~~ys~~~g~i--t~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl 150 (541)
T KOG4547|consen 73 LVLGTPQGSVLLYSVAGGEI--TAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSL 150 (541)
T ss_pred EEeecCCccEEEEEecCCeE--EEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceE
Confidence 45677788899998865432 2222334566788888888888899999999999999999999998898888899999
Q ss_pred EEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 356 SFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 356 ~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
..+|||++|++|| +.|++||+..
T Consensus 151 ~is~D~~~l~~as--~~ik~~~~~~ 173 (541)
T KOG4547|consen 151 CISPDGKILLTAS--RQIKVLDIET 173 (541)
T ss_pred EEcCCCCEEEecc--ceEEEEEccC
Confidence 9999999999998 6799999864
No 272
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.26 E-value=0.0003 Score=67.15 Aligned_cols=128 Identities=14% Similarity=0.063 Sum_probs=74.0
Q ss_pred cEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceE-EEEcCCc--EEEEEccCCCCeeEEeeeeecCCCCeEEEEECC
Q 016769 241 SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQK--IVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 241 ~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-s~~~d~~--i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p 317 (383)
.|.+||+.++.. ..+...........|++++..++ +.+.++. |.++|++... .. .+..+.......+|+|
T Consensus 243 ~L~~~dl~tg~~--~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~--~~---~lt~~~~~~~~p~wSp 315 (448)
T PRK04792 243 EIFVQDIYTQVR--EKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKA--LT---RITRHRAIDTEPSWHP 315 (448)
T ss_pred EEEEEECCCCCe--EEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCC--eE---ECccCCCCccceEECC
Confidence 588889876432 12221122334678899998775 4556665 5556665432 11 1222223456678999
Q ss_pred CCcEEEEEeC-CC--cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeC-CCcEEEE
Q 016769 318 DSKIAATAGW-DR--RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE-DSTVALW 376 (383)
Q Consensus 318 ~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~-d~~i~~w 376 (383)
|++.|+..+. ++ .|.++|+.+++... +..........+|+|||++|+..+. ++..+||
T Consensus 316 DG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~ 377 (448)
T PRK04792 316 DGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIA 377 (448)
T ss_pred CCCEEEEEECCCCCceEEEEECCCCCEEE-EecCCCCCcCeeECCCCCEEEEEEecCCceEEE
Confidence 9998776553 34 46666777666433 2112222345689999998877655 4444554
No 273
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.26 E-value=0.00019 Score=68.29 Aligned_cols=132 Identities=12% Similarity=-0.004 Sum_probs=78.7
Q ss_pred CcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceE-EEEcCC--cEEEEEccCCCCeeEEeeeeecCCCCeEEEEEC
Q 016769 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQ--KIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 316 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-s~~~d~--~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~ 316 (383)
..|.+||+.++.. ..+......+....|+|++..++ +.+.++ .|.+||++..... .+...........|+
T Consensus 223 ~~l~~~~l~~g~~--~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-----~lt~~~~~~~~~~~s 295 (430)
T PRK00178 223 PRIFVQNLDTGRR--EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-----RVTNHPAIDTEPFWG 295 (430)
T ss_pred CEEEEEECCCCCE--EEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-----EcccCCCCcCCeEEC
Confidence 4688999976432 22222223445678999988765 444455 4677787654321 111122234567899
Q ss_pred CCCcEEEEEeC-CC--cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCC---cEEEEeCC
Q 016769 317 PDSKIAATAGW-DR--RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS---TVALWELY 379 (383)
Q Consensus 317 p~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~---~i~~w~~~ 379 (383)
||++.|+..+. ++ .|+++|+.+++... +..........+|+|||++|+..+.+. .|.+||+.
T Consensus 296 pDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~ 363 (430)
T PRK00178 296 KDGRTLYFTSDRGGKPQIYKVNVNGGRAER-VTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQ 363 (430)
T ss_pred CCCCEEEEEECCCCCceEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCceEEEEEECC
Confidence 99997766553 33 57777887776432 211122334568999999988776543 46677764
No 274
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=98.25 E-value=9.2e-05 Score=63.29 Aligned_cols=126 Identities=15% Similarity=0.183 Sum_probs=87.0
Q ss_pred EEEEEeCCCcEEEEeCCCCC-CceeeeeccccCeEEEEEeCCC-CceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 232 NVLAGYEDGSILVWDIRNPG-IPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~-~~~~~~~~h~~~v~~~~~~~~~-~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
.++++-.+|.+.+-+..... ...+..+.|.-......|+... +.+++||.|+.+..||++.+. .+.+. ..+.|..+
T Consensus 135 ~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~-~~i~~-n~kvH~~G 212 (339)
T KOG0280|consen 135 KIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK-TFIWH-NSKVHTSG 212 (339)
T ss_pred eEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCc-ceeee-cceeeecc
Confidence 36677778888855543221 1123567888888888885443 356899999999999998443 34332 24456678
Q ss_pred eEEEEECC-CCcEEEEEeCCCcEEEEEcCC-CceEEEecccccceeEEEEeCC
Q 016769 310 ISGTSIRP-DSKIAATAGWDRRVRIYNYRK-GSALAILKYHHATCNAVSFSSD 360 (383)
Q Consensus 310 i~~~~~~p-~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~v~~spd 360 (383)
|.++.-+| .+.++++|+.|..|++||.+. ++++..- .-.+.|+.+.++|.
T Consensus 213 V~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~-~v~GGVWRi~~~p~ 264 (339)
T KOG0280|consen 213 VVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKA-KVGGGVWRIKHHPE 264 (339)
T ss_pred eEEEecCCCCCceEEEeccccceeeeehhcccCccccC-ccccceEEEEecch
Confidence 88887774 577999999999999999985 4444321 23466788887774
No 275
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.24 E-value=0.00052 Score=62.61 Aligned_cols=133 Identities=17% Similarity=0.215 Sum_probs=95.9
Q ss_pred CCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCC-cEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ-KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~-~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p 317 (383)
.|+..+.+...+. .+ . -+|...|.-..+..+...++.|..|| .+.++|.+... .+.....-+.|.++.++|
T Consensus 340 RGkaFi~~~~~~~-~i-q-v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e-----~kr~e~~lg~I~av~vs~ 411 (668)
T COG4946 340 RGKAFIMRPWDGY-SI-Q-VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE-----VKRIEKDLGNIEAVKVSP 411 (668)
T ss_pred cCcEEEECCCCCe-eE-E-cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCce-----EEEeeCCccceEEEEEcC
Confidence 5666665533211 11 1 13444566666655556778898998 78999987532 122333446799999999
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCC----cEEEEeCC
Q 016769 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS----TVALWELY 379 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~----~i~~w~~~ 379 (383)
+|++++.+-....|.+.|+++++....-+...+.|...+|||+++++|.+--+| .|+++|+.
T Consensus 412 dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~ 477 (668)
T COG4946 412 DGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMD 477 (668)
T ss_pred CCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecC
Confidence 999999988888888889999987766666778899999999999999988777 46777763
No 276
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.21 E-value=1.1e-05 Score=69.33 Aligned_cols=120 Identities=18% Similarity=0.285 Sum_probs=79.1
Q ss_pred ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecC-----CCCeEEEEECCCC-cEEEEEeCCCcEE
Q 016769 259 VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE-----RPGISGTSIRPDS-KIAATAGWDRRVR 332 (383)
Q Consensus 259 ~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~-----~~~i~~~~~~p~~-~~l~s~~~dg~i~ 332 (383)
.|.--+.++++..+...+++ +.|=+|.+|+++...+..-+.- ++.+ ..-|++..|+|.. ..+.=.++.|+|+
T Consensus 170 aH~yhiNSiS~NsD~et~lS-aDdLrINLWnl~i~D~sFnIVD-iKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ik 247 (460)
T COG5170 170 AHPYHINSISFNSDKETLLS-ADDLRINLWNLEIIDGSFNIVD-IKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIK 247 (460)
T ss_pred cceeEeeeeeecCchheeee-ccceeeeeccccccCCceEEEe-ccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEE
Confidence 35455678888777666555 4677899999987665544322 1211 1237788899864 3444456799999
Q ss_pred EEEcCCCc------eE--EEe--------cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 333 IYNYRKGS------AL--AIL--------KYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 333 iwd~~~~~------~~--~~~--------~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
+-|++... .+ .++ ......|..+.|+|+|+++++-+.- +|+|||+.+.
T Consensus 248 l~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyl-tvkiwDvnm~ 311 (460)
T COG5170 248 LNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYL-TVKIWDVNMA 311 (460)
T ss_pred ehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccc-eEEEEecccc
Confidence 99997321 11 111 2233567888999999999876654 7999998654
No 277
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.21 E-value=9.9e-05 Score=69.16 Aligned_cols=71 Identities=11% Similarity=0.186 Sum_probs=60.9
Q ss_pred CCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 307 RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 307 ~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
...+.+++++|+...++.|+.||.|.+||..++-.... .+.-.+..++|||+|-+++.|+.-|.+.+||+.
T Consensus 259 ~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 259 PSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred CCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 35789999999999999999999999999977643322 345567889999999999999999999999984
No 278
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.20 E-value=7.5e-05 Score=63.05 Aligned_cols=144 Identities=14% Similarity=0.052 Sum_probs=95.3
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEE-eCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSI-DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
.++.|+..|...+|.+.+....+.....|...|.-+.= ......+..++.|.++++.+++......... ...-..
T Consensus 86 ~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h----~~~~~~ 161 (344)
T KOG4532|consen 86 TLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVH----NQNLTQ 161 (344)
T ss_pred EEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceee----ccccce
Confidence 46678899999999988644333333444432211100 0011124567889999999887554322221 111127
Q ss_pred EEEEECCCCcEEEEEeCCCcEEEEEcCCCce-E-E-EecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 311 SGTSIRPDSKIAATAGWDRRVRIYNYRKGSA-L-A-ILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~-~-~-~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++++++||++++++.+.-..|..|.++.... + . ....-..--.+..|+.....+|+++.||++.|||+.
T Consensus 162 ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR 233 (344)
T KOG4532|consen 162 NSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVR 233 (344)
T ss_pred eeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEec
Confidence 7899999999999999999999999965332 2 2 122223345777899888899999999999999985
No 279
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.16 E-value=0.00047 Score=65.31 Aligned_cols=136 Identities=18% Similarity=0.123 Sum_probs=77.3
Q ss_pred CcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc-CC----cEEEEEccCCC-CeeEEeeeeecCCCCeEEE
Q 016769 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQ----KIVLYNLDHST-GSCVIKKEINLERPGISGT 313 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~-d~----~i~~wdl~~~~-~~~~~~~~~~~~~~~i~~~ 313 (383)
..|.+.++..+.. ..+...........|+|+++.++..+. ++ .+.+|++.... +.... ............
T Consensus 211 ~~I~~~~l~~g~~--~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~--lt~~~~~~~~~p 286 (428)
T PRK01029 211 PKIFLGSLENPAG--KKILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRR--LLNEAFGTQGNP 286 (428)
T ss_pred ceEEEEECCCCCc--eEeecCCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceE--eecCCCCCcCCe
Confidence 3577778765432 222222333445788999987765432 22 33446665321 11111 111111223567
Q ss_pred EECCCCcEEEEEe-CCCcEEEEEc--CC-CceEEEecccccceeEEEEeCCCCEEEEEeCC---CcEEEEeCC
Q 016769 314 SIRPDSKIAATAG-WDRRVRIYNY--RK-GSALAILKYHHATCNAVSFSSDCKLMASASED---STVALWELY 379 (383)
Q Consensus 314 ~~~p~~~~l~s~~-~dg~i~iwd~--~~-~~~~~~~~~h~~~v~~v~~spd~~~las~s~d---~~i~~w~~~ 379 (383)
+|+|||+.|+..+ .+|...+|.+ .. +.....+..+...+....|||||++|+..+.+ ..|.+||+.
T Consensus 287 ~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~ 359 (428)
T PRK01029 287 SFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLA 359 (428)
T ss_pred EECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECC
Confidence 8999999877665 4676666644 32 23334444444566788999999988876654 358888874
No 280
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.15 E-value=0.0023 Score=67.27 Aligned_cols=110 Identities=17% Similarity=0.193 Sum_probs=71.6
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceee----------ee----------ccccCeEEEEEeCCCCceEEEEcCCcEEEEEcc
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTA----------MK----------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~----------~~----------~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~ 291 (383)
..++.+.++.|++||+++....+.. .. ........+.+++++..+++-..+++|++||.+
T Consensus 754 LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~ 833 (1057)
T PLN02919 754 LYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPA 833 (1057)
T ss_pred EEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECC
Confidence 4566788899999998764321100 00 001123578888888766777788999999986
Q ss_pred CCCCeeEEeee---------eecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCce
Q 016769 292 HSTGSCVIKKE---------INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA 341 (383)
Q Consensus 292 ~~~~~~~~~~~---------~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~ 341 (383)
........... ....-....+++++++|+.+++-+.+++|++||+.+++.
T Consensus 834 tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 834 TKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 43211111000 000112467899999999999999999999999988764
No 281
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.11 E-value=1.6e-05 Score=73.35 Aligned_cols=144 Identities=15% Similarity=0.182 Sum_probs=95.1
Q ss_pred EEEEEeCCCcEEEEeCCCCCC------ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec
Q 016769 232 NVLAGYEDGSILVWDIRNPGI------PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL 305 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~ 305 (383)
.+++++.|++|++|.++..+- +.-+.+.|..+|..+.|-.+.+.++ +.|+.|.+||--- ++.+.......
T Consensus 749 SFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~--ScD~giHlWDPFi--gr~Laq~~dap 824 (1034)
T KOG4190|consen 749 SFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIA--SCDGGIHLWDPFI--GRLLAQMEDAP 824 (1034)
T ss_pred ceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceee--eccCcceeecccc--cchhHhhhcCc
Confidence 478999999999999875431 3445678999999999977666544 5699999998421 11111001001
Q ss_pred CCCCeEEEEECC--CCcEEEEE-eCCCcEEEEEcCCCceEEEe-----cccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 306 ERPGISGTSIRP--DSKIAATA-GWDRRVRIYNYRKGSALAIL-----KYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 306 ~~~~i~~~~~~p--~~~~l~s~-~~dg~i~iwd~~~~~~~~~~-----~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
..+....+..-| +...+++| +...+|+++|.+..+-...+ .+....+.+++..|.|++||.|=.+|+|-+-|
T Consensus 825 k~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LD 904 (1034)
T KOG4190|consen 825 KEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILD 904 (1034)
T ss_pred ccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEe
Confidence 111122222222 33455555 67899999999887643322 23345678899999999999999999998887
Q ss_pred CC
Q 016769 378 LY 379 (383)
Q Consensus 378 ~~ 379 (383)
..
T Consensus 905 aR 906 (1034)
T KOG4190|consen 905 AR 906 (1034)
T ss_pred cC
Confidence 64
No 282
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.10 E-value=8.6e-06 Score=72.23 Aligned_cols=84 Identities=17% Similarity=0.249 Sum_probs=62.5
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEee
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd 92 (383)
-..||-.-+++|+++||.+.|+|+-.|..|||=......-+.... .++.+.|..++..+ +..|+|+|.|+|+++||
T Consensus 146 ~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesfc-lGH~eFVS~isl~~---~~~LlS~sGD~tlr~Wd 221 (390)
T KOG3914|consen 146 PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFC-LGHKEFVSTISLTD---NYLLLSGSGDKTLRLWD 221 (390)
T ss_pred hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhc-cccHhheeeeeecc---CceeeecCCCCcEEEEe
Confidence 356999999999999999999999999999997765433332221 12223455555554 34579999999999999
Q ss_pred cCCCCCCC
Q 016769 93 IENGGLSS 100 (383)
Q Consensus 93 ~~~~~~~~ 100 (383)
+.+|.++.
T Consensus 222 ~~sgk~L~ 229 (390)
T KOG3914|consen 222 ITSGKLLD 229 (390)
T ss_pred cccCCccc
Confidence 99987543
No 283
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=98.09 E-value=0.0014 Score=61.03 Aligned_cols=114 Identities=16% Similarity=0.258 Sum_probs=76.6
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcC---CcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD---QKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d---~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
++-|..=.++-|||++- .++ +....++=+++-|+|.+..++.+|.+ |.+.+||..... .+ .+.....
T Consensus 287 VvyGfMPAkvtifnlr~--~~v--~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K--~i----~~~~a~~ 356 (566)
T KOG2315|consen 287 VVYGFMPAKVTIFNLRG--KPV--FDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRK--LI----AKFKAAN 356 (566)
T ss_pred EEEecccceEEEEcCCC--CEe--EeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchh--hc----cccccCC
Confidence 55677788899999874 223 33345677789999999988877764 779999986532 11 1222334
Q ss_pred eEEEEECCCCcEEEEEeC------CCcEEEEEcCCCceEEEeccccc-ceeEEEEeC
Q 016769 310 ISGTSIRPDSKIAATAGW------DRRVRIYNYRKGSALAILKYHHA-TCNAVSFSS 359 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~h~~-~v~~v~~sp 359 (383)
.+-+.|+|||++|++++. |..++||+. +|+.+.. .+-. ..+.+.|-|
T Consensus 357 tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~~--~~f~sEL~qv~W~P 410 (566)
T KOG2315|consen 357 TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY-TGSLLHE--KMFKSELLQVEWRP 410 (566)
T ss_pred ceEEEEcCCCcEEEEEeccccEEecCCeEEEEe-cCceeeh--hhhhHhHhheeeee
Confidence 567889999999988875 678899998 4554421 1122 355666665
No 284
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.07 E-value=7.6e-06 Score=47.87 Aligned_cols=38 Identities=29% Similarity=0.657 Sum_probs=34.9
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEee
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWD 46 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~ 46 (383)
++...+.+|...|++++|++++..+++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 45678889999999999999999999999999999996
No 285
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.00 E-value=0.00084 Score=63.30 Aligned_cols=186 Identities=11% Similarity=-0.005 Sum_probs=96.8
Q ss_pred cccCCCCCceee-eccC-CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEe--C
Q 016769 163 DDVPAEGPKYMA-VAGE-QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY--E 238 (383)
Q Consensus 163 ~~~~~~~~~~~~-~~g~-~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~--~ 238 (383)
...+++|++.++ ++-. ....|.++|+.+++...-.... +.... ..+.|+. ...+++.+ .
T Consensus 193 p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~-------------g~~~~-~~~SPDG---~~la~~~~~~g 255 (419)
T PRK04043 193 PKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQ-------------GMLVV-SDVSKDG---SKLLLTMAPKG 255 (419)
T ss_pred EEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCC-------------CcEEe-eEECCCC---CEEEEEEccCC
Confidence 345677765333 3333 2457999999887643222111 11111 1233332 22233332 3
Q ss_pred CCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE-cCC--cEEEEEccCCCCeeEEeeeeecCCCCeEEEEE
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQ--KIVLYNLDHSTGSCVIKKEINLERPGISGTSI 315 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~--~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~ 315 (383)
+..|.++|+..+. ...+..+........|+|++..++-.+ ..+ .|.+.|++..+.. . +.... .....+
T Consensus 256 ~~~Iy~~dl~~g~--~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~-r----lt~~g--~~~~~~ 326 (419)
T PRK04043 256 QPDIYLYDTNTKT--LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVE-Q----VVFHG--KNNSSV 326 (419)
T ss_pred CcEEEEEECCCCc--EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeE-e----CccCC--CcCceE
Confidence 4567777876532 233333322223456899988765443 344 3555666543211 1 11111 122489
Q ss_pred CCCCcEEEEEeCC---------CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCC-CcEEEE
Q 016769 316 RPDSKIAATAGWD---------RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED-STVALW 376 (383)
Q Consensus 316 ~p~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d-~~i~~w 376 (383)
+|||++++-.+.. ..|.+.|++++... .+.... ......|+|||++++..+.+ +.-.||
T Consensus 327 SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~-~LT~~~-~~~~p~~SPDG~~I~f~~~~~~~~~L~ 395 (419)
T PRK04043 327 STYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIR-RLTANG-VNQFPRFSSDGGSIMFIKYLGNQSALG 395 (419)
T ss_pred CCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeE-ECCCCC-CcCCeEECCCCCEEEEEEccCCcEEEE
Confidence 9999988777654 26788888777643 333222 23357899999977665543 333344
No 286
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=97.89 E-value=0.0001 Score=64.44 Aligned_cols=124 Identities=22% Similarity=0.272 Sum_probs=84.4
Q ss_pred EEEEEeCCCcEEEEeCCCC----CCceeeeeccccCeEEEEEeC-CCCceEEEEcCCcEEEEEccCCCCee-EEeeeeec
Q 016769 232 NVLAGYEDGSILVWDIRNP----GIPLTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTGSC-VIKKEINL 305 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~----~~~~~~~~~h~~~v~~~~~~~-~~~~~~s~~~d~~i~~wdl~~~~~~~-~~~~~~~~ 305 (383)
.+..|..+|.|...|+|.. +.+.. .-.|-..|+++..-. +...+++.+-+|.|++||++.-.+.. .... ..
T Consensus 266 Lv~~GcRngeI~~iDLR~rnqG~~~~a~-rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qY--eG 342 (425)
T KOG2695|consen 266 LVFNGCRNGEIFVIDLRCRNQGNGWCAQ-RLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQY--EG 342 (425)
T ss_pred eeEecccCCcEEEEEeeecccCCCcceE-EEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeee--ec
Confidence 4677999999999999864 22222 235777888887744 66778999999999999997533211 1111 11
Q ss_pred CCC--CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecc----cccceeEEEEe
Q 016769 306 ERP--GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY----HHATCNAVSFS 358 (383)
Q Consensus 306 ~~~--~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----h~~~v~~v~~s 358 (383)
|.+ .-.-+-+++....+++++.|-.-|||.++++..+.++.. -+..+.+++|.
T Consensus 343 HvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 343 HVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFD 401 (425)
T ss_pred ccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCCCccccccccceehh
Confidence 211 112233567778999999999999999999998876642 23356677764
No 287
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.87 E-value=4.6e-05 Score=44.31 Aligned_cols=38 Identities=45% Similarity=0.693 Sum_probs=33.8
Q ss_pred ceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 340 SALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 340 ~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
+....+..|...|.++.|+|+++++++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 44566778899999999999999999999999999996
No 288
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=97.85 E-value=0.00071 Score=59.27 Aligned_cols=145 Identities=14% Similarity=0.281 Sum_probs=93.9
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccc--cCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHL--EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
+++.+.|.++|+|--+...+.-..+ .|+ .++.++++......++.|=..+++.-+.+...=.+....+....+...+
T Consensus 39 v~~~s~drtvrv~lkrds~q~wpsI-~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v 117 (404)
T KOG1409|consen 39 VISVSEDRTVRVWLKRDSGQYWPSI-YHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARV 117 (404)
T ss_pred eEEccccceeeeEEeccccccCchh-hhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcce
Confidence 7788999999999654433211112 233 4677888877766666666667776665432111111122223344556
Q ss_pred EEEEECCCCcEEEEEeCCCcEEEEEc------------------------------------------CCCceEEEeccc
Q 016769 311 SGTSIRPDSKIAATAGWDRRVRIYNY------------------------------------------RKGSALAILKYH 348 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~dg~i~iwd~------------------------------------------~~~~~~~~~~~h 348 (383)
..+.|+-....+++.+.|+.+. |.. .....+.++.+|
T Consensus 118 ~~~if~~~~e~V~s~~~dk~~~-~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h 196 (404)
T KOG1409|consen 118 SAIVFSLTHEWVLSTGKDKQFA-WHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGH 196 (404)
T ss_pred eeEEecCCceeEEEeccccceE-EEeeccCCcccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCc
Confidence 6666665556666666665443 322 112346688899
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 349 HATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 349 ~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
...+.+++|-|..+.|.+|..|..|.+||+.
T Consensus 197 ~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdig 227 (404)
T KOG1409|consen 197 TGEVTCLKWDPGQRLLFSGASDHSVIMWDIG 227 (404)
T ss_pred ccceEEEEEcCCCcEEEeccccCceEEEecc
Confidence 9999999999999999999999999999985
No 289
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.0044 Score=54.86 Aligned_cols=142 Identities=15% Similarity=0.238 Sum_probs=98.2
Q ss_pred CCcEEEEeCCCCCCcee--eeeccccCeEEEEEeCCCCceEEEEc---CCcEEEEEccCCCCeeEEeeeeecCCCCeEEE
Q 016769 239 DGSILVWDIRNPGIPLT--AMKVHLEPVLCLSIDESCNGGISGGA---DQKIVLYNLDHSTGSCVIKKEINLERPGISGT 313 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~s~~~---d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~ 313 (383)
++-|.+|++.+..-.+. ..-.+.+...-+.++++.+.|+++.. ++.|.-|.++..++...+...........+-+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv 94 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV 94 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence 57799999874322121 12235567788999999888887754 57788899887666665554444444455889
Q ss_pred EECCCCcEEEEEeC-CCcEEEEEcCC-CceEE--Eecccccc----------eeEEEEeCCCCEEEEEeCC-CcEEEEeC
Q 016769 314 SIRPDSKIAATAGW-DRRVRIYNYRK-GSALA--ILKYHHAT----------CNAVSFSSDCKLMASASED-STVALWEL 378 (383)
Q Consensus 314 ~~~p~~~~l~s~~~-dg~i~iwd~~~-~~~~~--~~~~h~~~----------v~~v~~spd~~~las~s~d-~~i~~w~~ 378 (383)
++++++++++++.. -|.|.++-+.. |.... ..-.|.+. +..+.|.||+++|++..-. -.|.+|++
T Consensus 95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~ 174 (346)
T COG2706 95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDL 174 (346)
T ss_pred EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEc
Confidence 99999999888874 68999999854 43221 22235554 7888899999988875432 25888888
Q ss_pred CC
Q 016769 379 YP 380 (383)
Q Consensus 379 ~~ 380 (383)
.+
T Consensus 175 ~d 176 (346)
T COG2706 175 DD 176 (346)
T ss_pred cc
Confidence 64
No 290
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.78 E-value=0.0055 Score=52.67 Aligned_cols=146 Identities=15% Similarity=0.149 Sum_probs=87.0
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeec-------cccCeEEEEEeCCC------CceEEEEcCCcEEEEEccCCCCe--
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKV-------HLEPVLCLSIDESC------NGGISGGADQKIVLYNLDHSTGS-- 296 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~-------h~~~v~~~~~~~~~------~~~~s~~~d~~i~~wdl~~~~~~-- 296 (383)
.++.+...|+|++||+... . +..+.. -..+|..|.|-+.. ..++.-..+|.++-|-+...+..
T Consensus 57 lLa~a~S~G~i~vfdl~g~-~-lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y 134 (282)
T PF15492_consen 57 LLAYAESTGTIRVFDLMGS-E-LFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGY 134 (282)
T ss_pred EEEEEcCCCeEEEEecccc-e-eEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcc
Confidence 4666788999999998632 1 111111 12356666662211 13566677777776655322111
Q ss_pred -eEEeeee-ecCCCCeEEEEECCCCcEEEEEeCCC-----------cEEEEEcCCCceEE--------------------
Q 016769 297 -CVIKKEI-NLERPGISGTSIRPDSKIAATAGWDR-----------RVRIYNYRKGSALA-------------------- 343 (383)
Q Consensus 297 -~~~~~~~-~~~~~~i~~~~~~p~~~~l~s~~~dg-----------~i~iwd~~~~~~~~-------------------- 343 (383)
....... .....+|+++.++|..+.|+.||... =+.-|.+-.+.+..
T Consensus 135 ~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~ 214 (282)
T PF15492_consen 135 QENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLL 214 (282)
T ss_pred eeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCcccccccccccee
Confidence 1111111 11235899999999999877776421 14456553322110
Q ss_pred ---E---e---cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 344 ---I---L---KYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 344 ---~---~---~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
. + ...+..|..+.+||||+.||+...+|.|.+|++.
T Consensus 215 ~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iP 259 (282)
T PF15492_consen 215 RIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIP 259 (282)
T ss_pred eccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecC
Confidence 0 0 1135578899999999999999999999999984
No 291
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=97.77 E-value=0.00064 Score=66.77 Aligned_cols=138 Identities=16% Similarity=0.240 Sum_probs=96.3
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc---------CCcEEEEEccCCCCeeEEeee
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA---------DQKIVLYNLDHSTGSCVIKKE 302 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~---------d~~i~~wdl~~~~~~~~~~~~ 302 (383)
.+..|...|+|.+-|.++ ..+++++..|.+.+..+.+ .++.+++||. |.-|++|||+..... ..
T Consensus 189 ~lf~G~t~G~V~LrD~~s-~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral----~P 261 (1118)
T KOG1275|consen 189 NLFCGDTRGTVFLRDPNS-FETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRAL----SP 261 (1118)
T ss_pred EEEeecccceEEeecCCc-Cceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhcc----CC
Confidence 578899999999999987 4568899999998876655 4677888875 556789998753211 11
Q ss_pred eecCCCCeEEEEECCC-CcEEEEEeCCCcEEEEEcCC-Cce---EEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 303 INLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYRK-GSA---LAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 303 ~~~~~~~i~~~~~~p~-~~~l~s~~~dg~i~iwd~~~-~~~---~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
+..+ .+..=+.|+|. ...++.++..|...+-|..+ +++ ...+..-...+....+|+.|..||.|..+|.|.+|.
T Consensus 262 I~~~-~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 262 IQFP-YGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred cccc-cCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 1111 12233456665 34678888899999888422 121 222222344588899999999999999999999996
No 292
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=97.75 E-value=6.7e-05 Score=71.71 Aligned_cols=143 Identities=14% Similarity=0.249 Sum_probs=99.9
Q ss_pred EEEEeCCCcEEEEeCCCCCC-ce-eeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 233 VLAGYEDGSILVWDIRNPGI-PL-TAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~-~~-~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
+++-+ ...-.+|++..+.. .+ -.+.+|...|..+.|.+... .+++++.|-.+..||+......... .......
T Consensus 85 iVsts-~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys---~~~w~s~ 160 (1081)
T KOG0309|consen 85 IVSTS-NQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYS---TSSWRSA 160 (1081)
T ss_pred EEecC-cchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceee---eeccccc
Confidence 44433 34456898865432 22 23457889999999977654 5789999999999999865433221 1222344
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCC-ceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKG-SALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
...+.++--...+.+.+..+.|++||++.+ .++..+++|...|+.++|..-.. .+.+.+.|++|++||..
T Consensus 161 asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~ 232 (1081)
T KOG0309|consen 161 ASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYS 232 (1081)
T ss_pred CceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccc
Confidence 566777643333444567788999999876 45678889999999999975432 57889999999999985
No 293
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=97.74 E-value=7.8e-05 Score=61.74 Aligned_cols=142 Identities=15% Similarity=0.164 Sum_probs=89.8
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
+..-+.||.|+=++++......+....|.+- +.+-.....++.|+.++.|.+|..+........ .. .........
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~---~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~-~~-s~~e~i~~~ 107 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESCRSERFIDEG---QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDR-VC-SGEESIDLG 107 (238)
T ss_pred hccccCCcccccchhhhhhhhhhhhhhhhcc---eeecccCceEEeecccceEEEecCCccchHHHh-hh-cccccceec
Confidence 4455678888888776533222222223222 222223345788999999999987632211110 00 001111222
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccc-cceeEEEEeCCCCEEEEE--eCCCcEEEEeCC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH-ATCNAVSFSSDCKLMASA--SEDSTVALWELY 379 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~v~~spd~~~las~--s~d~~i~~w~~~ 379 (383)
+....++.+..++++|+.||.|++...+.+....+|. .++.....+.-++.++.+ |.|..++.|++.
T Consensus 108 Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 108 IPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred cccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 2233455678889999999999999999888777787 667666777777888888 999999999985
No 294
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=97.74 E-value=0.0078 Score=58.48 Aligned_cols=87 Identities=13% Similarity=0.212 Sum_probs=56.2
Q ss_pred CCeeeeeecCCceeeEEEeCCC------------CeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCc
Q 016769 9 DPVAVLRGHRASVTDVCFHQTK------------PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGL 76 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~------------~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (383)
+.+++++-|...|+.|.+.|-. -+||++--.|+|.+||+..+-....+..+ ...+.-+++.+..+.
T Consensus 46 q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~--~~~~qdl~W~~~rd~ 123 (1062)
T KOG1912|consen 46 QLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHS--NDSVQDLCWVPARDD 123 (1062)
T ss_pred hhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCC--CcchhheeeeeccCc
Confidence 4567788999999999987531 24666666699999998654333222222 233444444443222
Q ss_pred --ceeEecccCCeEEEeecCCCC
Q 016769 77 --NKVISQGRDGTVKCWDIENGG 97 (383)
Q Consensus 77 --~~l~s~~~D~ti~~Wd~~~~~ 97 (383)
..|+......++-+||-.+|+
T Consensus 124 Srd~LlaIh~ss~lvLwntdtG~ 146 (1062)
T KOG1912|consen 124 SRDVLLAIHGSSTLVLWNTDTGE 146 (1062)
T ss_pred chheeEEecCCcEEEEEEccCCc
Confidence 245666777899999988885
No 295
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.71 E-value=0.0014 Score=59.88 Aligned_cols=125 Identities=13% Similarity=0.191 Sum_probs=89.1
Q ss_pred EEEEeCCC-cEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 233 VLAGYEDG-SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 233 ~~sg~~dg-~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
++.|..|| .+-++|.+... ...+....+.|..+..+++++.++.+.....+-+.|++..+.+.. -+.+.+-|.
T Consensus 374 ~vigt~dgD~l~iyd~~~~e--~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~i----dkS~~~lIt 447 (668)
T COG4946 374 DVIGTNDGDKLGIYDKDGGE--VKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLI----DKSEYGLIT 447 (668)
T ss_pred eEEeccCCceEEEEecCCce--EEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEe----cccccceeE
Confidence 67788888 89999987632 455666678899999999999878776666677777776543221 123345699
Q ss_pred EEEECCCCcEEEEEeCC----CcEEEEEcCCCceEEEe--cccccceeEEEEeCCCCEEEE
Q 016769 312 GTSIRPDSKIAATAGWD----RRVRIYNYRKGSALAIL--KYHHATCNAVSFSSDCKLMAS 366 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~d----g~i~iwd~~~~~~~~~~--~~h~~~v~~v~~spd~~~las 366 (383)
.+++||+++++|=+--+ ..|+++|+..++.+... .+|. .+=+|.||+++|-.
T Consensus 448 df~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~D---fsPaFD~d~ryLYf 505 (668)
T COG4946 448 DFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYD---FSPAFDPDGRYLYF 505 (668)
T ss_pred EEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccc---cCcccCCCCcEEEE
Confidence 99999999998865544 47999999888765432 2233 33478899997643
No 296
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.68 E-value=0.0092 Score=51.32 Aligned_cols=45 Identities=18% Similarity=0.237 Sum_probs=38.3
Q ss_pred CCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccccc
Q 016769 306 ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350 (383)
Q Consensus 306 ~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~ 350 (383)
....|..+.++|||+.||+...+|+|.+|++...++...+.-++.
T Consensus 228 ~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~eq 272 (282)
T PF15492_consen 228 EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDEQ 272 (282)
T ss_pred CCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhhC
Confidence 446789999999999999999999999999998887776654443
No 297
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.67 E-value=6.3e-05 Score=69.53 Aligned_cols=122 Identities=19% Similarity=0.295 Sum_probs=83.0
Q ss_pred eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCC-----CCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC
Q 016769 254 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS-----TGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD 328 (383)
Q Consensus 254 ~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~-----~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d 328 (383)
+..+.+|++.|+.+.--...+.+++++.|+++++|.++.. +..|.+ ....|...|..+-|-.+-++++++ |
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQf--TY~aHkk~i~~igfL~~lr~i~Sc--D 803 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQF--TYQAHKKPIHDIGFLADLRSIASC--D 803 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeee--EhhhccCcccceeeeeccceeeec--c
Confidence 4556789998888766444567899999999999999743 122332 334456678899998898998854 9
Q ss_pred CcEEEEEcCCCceEEEec--ccccceeEEEEeC--CCCEEEEE-eCCCcEEEEeCC
Q 016769 329 RRVRIYNYRKGSALAILK--YHHATCNAVSFSS--DCKLMASA-SEDSTVALWELY 379 (383)
Q Consensus 329 g~i~iwd~~~~~~~~~~~--~h~~~v~~v~~sp--d~~~las~-s~d~~i~~w~~~ 379 (383)
+-|++||.-.++.+..+. ..++.+.-+..-| |..+++.| +...+|+++|..
T Consensus 804 ~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaR 859 (1034)
T KOG4190|consen 804 GGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDAR 859 (1034)
T ss_pred CcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecc
Confidence 999999997777665332 1122233333333 44455444 889999998864
No 298
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.65 E-value=0.031 Score=51.80 Aligned_cols=88 Identities=13% Similarity=0.152 Sum_probs=53.4
Q ss_pred CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEE--EeCCCcEEEEEcCCCceEEEecccccceeEEEEeCC
Q 016769 283 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT--AGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSD 360 (383)
Q Consensus 283 ~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd 360 (383)
..+.|+++...+.+... ...+.|..++|.|.++.++. |-.+-++.++|++..-... .-+.+=+.+-|||.
T Consensus 255 snLyl~~~~e~~i~V~~-----~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl~~~---~Pe~~rNT~~fsp~ 326 (561)
T COG5354 255 SNLYLLRITERSIPVEK-----DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNLRFY---FPEQKRNTIFFSPH 326 (561)
T ss_pred ceEEEEeecccccceec-----cccccceeeeecccCCceeEEecccccceeecccccceEEe---cCCcccccccccCc
Confidence 44667776644332211 12357889999998875444 4578899999997652222 22333455567787
Q ss_pred CCEEEEEeCC---CcEEEEeC
Q 016769 361 CKLMASASED---STVALWEL 378 (383)
Q Consensus 361 ~~~las~s~d---~~i~~w~~ 378 (383)
+++++.++-| |.|.+||.
T Consensus 327 ~r~il~agF~nl~gni~i~~~ 347 (561)
T COG5354 327 ERYILFAGFDNLQGNIEIFDP 347 (561)
T ss_pred ccEEEEecCCccccceEEecc
Confidence 7777766655 35666654
No 299
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.51 E-value=0.016 Score=50.53 Aligned_cols=140 Identities=13% Similarity=0.090 Sum_probs=84.7
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec-CCCCeE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL-ERPGIS 311 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~-~~~~i~ 311 (383)
+++....+.|..||..+.. ...+... ....+.++.....++.+..+ .+.++|+............... .....+
T Consensus 15 ~~~D~~~~~i~~~~~~~~~--~~~~~~~--~~~G~~~~~~~g~l~v~~~~-~~~~~d~~~g~~~~~~~~~~~~~~~~~~N 89 (246)
T PF08450_consen 15 YWVDIPGGRIYRVDPDTGE--VEVIDLP--GPNGMAFDRPDGRLYVADSG-GIAVVDPDTGKVTVLADLPDGGVPFNRPN 89 (246)
T ss_dssp EEEETTTTEEEEEETTTTE--EEEEESS--SEEEEEEECTTSEEEEEETT-CEEEEETTTTEEEEEEEEETTCSCTEEEE
T ss_pred EEEEcCCCEEEEEECCCCe--EEEEecC--CCceEEEEccCCEEEEEEcC-ceEEEecCCCcEEEEeeccCCCcccCCCc
Confidence 4455567888889887632 2222222 25667777333455666554 4566687654322222221111 334688
Q ss_pred EEEECCCCcEEEEEeCC--------CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEE-EEEeCCCcEEEEeCC
Q 016769 312 GTSIRPDSKIAATAGWD--------RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~l-as~s~d~~i~~w~~~ 379 (383)
.+++.|+|++.++.... |.|..++.. ++.. .+.......+.++|+||++.| ++-+..+.|..+++.
T Consensus 90 D~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~-~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~ 164 (246)
T PF08450_consen 90 DVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVT-VVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLD 164 (246)
T ss_dssp EEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEE-EEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEE
T ss_pred eEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEE-EEecCcccccceEECCcchheeecccccceeEEEecc
Confidence 99999999977766644 457777776 4433 333345567999999999955 677888888888875
No 300
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=97.48 E-value=0.011 Score=56.91 Aligned_cols=80 Identities=21% Similarity=0.224 Sum_probs=51.5
Q ss_pred eeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEe
Q 016769 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~W 91 (383)
++|+||.+.|.-+.++.+.+.|-|...+|.|.||-+..+.=...........-+.++++.. +|.++...-.||.|-+=
T Consensus 65 QtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~--dG~kIcIvYeDGavIVG 142 (1189)
T KOG2041|consen 65 QTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNL--DGTKICIVYEDGAVIVG 142 (1189)
T ss_pred hhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcC--CCcEEEEEEccCCEEEE
Confidence 6899999999999999999999999999999999876553111100000112234444443 45555555555555444
Q ss_pred ec
Q 016769 92 DI 93 (383)
Q Consensus 92 d~ 93 (383)
.+
T Consensus 143 sv 144 (1189)
T KOG2041|consen 143 SV 144 (1189)
T ss_pred ee
Confidence 33
No 301
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=97.45 E-value=0.0005 Score=65.76 Aligned_cols=140 Identities=16% Similarity=0.135 Sum_probs=99.9
Q ss_pred EEEEEeCCCcEEEEeCCCCCC--------------ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCee
Q 016769 232 NVLAGYEDGSILVWDIRNPGI--------------PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC 297 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~ 297 (383)
.++.|+.||.+++-.+.+... .-.++.+|.+.|..+.|....+.+-+...+|.|.+|=+=..+.
T Consensus 28 yIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW-- 105 (1189)
T KOG2041|consen 28 YIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSW-- 105 (1189)
T ss_pred eEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccH--
Confidence 467789999999998865311 1135678999999999988888888888999999997643221
Q ss_pred EEeeee--ecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEE--EecccccceeEEEEeCCCCEEEEEeCCCcE
Q 016769 298 VIKKEI--NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA--ILKYHHATCNAVSFSSDCKLMASASEDSTV 373 (383)
Q Consensus 298 ~~~~~~--~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~h~~~v~~v~~spd~~~las~s~d~~i 373 (383)
..++ ....+-|.+++++.||..+...-.||.|.+=.++ |..+. .+++. ....+.||||.+.+..+-.+|.+
T Consensus 106 --~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd-GNRIwgKeLkg~--~l~hv~ws~D~~~~Lf~~ange~ 180 (1189)
T KOG2041|consen 106 --CEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD-GNRIWGKELKGQ--LLAHVLWSEDLEQALFKKANGET 180 (1189)
T ss_pred --HHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec-cceecchhcchh--eccceeecccHHHHHhhhcCCcE
Confidence 1111 1223457889999999988888889988765553 33332 22221 12366799999988888899999
Q ss_pred EEEeC
Q 016769 374 ALWEL 378 (383)
Q Consensus 374 ~~w~~ 378 (383)
+++|.
T Consensus 181 hlydn 185 (1189)
T KOG2041|consen 181 HLYDN 185 (1189)
T ss_pred EEecc
Confidence 99986
No 302
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.41 E-value=0.068 Score=46.07 Aligned_cols=177 Identities=17% Similarity=0.099 Sum_probs=99.3
Q ss_pred CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeee
Q 016769 178 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 257 (383)
Q Consensus 178 ~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~ 257 (383)
+.++.+..||..+++.+.+....... .....+ .. ..++.+..++.|..+|++++...-...
T Consensus 43 ~~~~~l~~~d~~tG~~~W~~~~~~~~----------~~~~~~-------~~--~~v~v~~~~~~l~~~d~~tG~~~W~~~ 103 (238)
T PF13360_consen 43 SGDGNLYALDAKTGKVLWRFDLPGPI----------SGAPVV-------DG--GRVYVGTSDGSLYALDAKTGKVLWSIY 103 (238)
T ss_dssp ETTSEEEEEETTTSEEEEEEECSSCG----------GSGEEE-------ET--TEEEEEETTSEEEEEETTTSCEEEEEE
T ss_pred cCCCEEEEEECCCCCEEEEeeccccc----------cceeee-------cc--cccccccceeeeEecccCCcceeeeec
Confidence 45679999999999977665421100 000000 01 135666788899999988754322211
Q ss_pred eccc---cCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC--------CeEEEEECCCCcEEEEEe
Q 016769 258 KVHL---EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP--------GISGTSIRPDSKIAATAG 326 (383)
Q Consensus 258 ~~h~---~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~--------~i~~~~~~p~~~~l~s~~ 326 (383)
.... ...........+..++.+..++.+..+|+++ +............. .+..-.+..++ .+..++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t--G~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~ 180 (238)
T PF13360_consen 104 LTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKT--GKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSS 180 (238)
T ss_dssp E-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTT--TEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEEC
T ss_pred cccccccccccccCceEecCEEEEEeccCcEEEEecCC--CcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEc
Confidence 1111 1111122222255677787899999998764 44444333321111 11222333345 566667
Q ss_pred CCCc-EEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 327 WDRR-VRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 327 ~dg~-i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.++. +.+ |+.+++.+.... ...+.. ...+++..|+.++.|+.|..||+..
T Consensus 181 ~~g~~~~~-d~~tg~~~w~~~--~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~t 231 (238)
T PF13360_consen 181 GDGRVVAV-DLATGEKLWSKP--ISGIYS-LPSVDGGTLYVTSSDGRLYALDLKT 231 (238)
T ss_dssp CTSSEEEE-ETTTTEEEEEEC--SS-ECE-CEECCCTEEEEEETTTEEEEEETTT
T ss_pred CCCeEEEE-ECCCCCEEEEec--CCCccC-CceeeCCEEEEEeCCCEEEEEECCC
Confidence 7775 555 999999775332 223332 1457788888888999999999864
No 303
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.40 E-value=0.12 Score=48.55 Aligned_cols=135 Identities=12% Similarity=0.024 Sum_probs=77.6
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.++.++.+|.+..+|++++...- +........+... +..++.++.++.+...|..+. ......... ......
T Consensus 258 ~vy~~~~~g~l~ald~~tG~~~W---~~~~~~~~~~~~~--~~~vy~~~~~g~l~ald~~tG--~~~W~~~~~-~~~~~~ 329 (394)
T PRK11138 258 VVYALAYNGNLVALDLRSGQIVW---KREYGSVNDFAVD--GGRIYLVDQNDRVYALDTRGG--VELWSQSDL-LHRLLT 329 (394)
T ss_pred EEEEEEcCCeEEEEECCCCCEEE---eecCCCccCcEEE--CCEEEEEcCCCeEEEEECCCC--cEEEccccc-CCCccc
Confidence 36667788999999988754211 1111111112222 345667778888888887543 222221110 011112
Q ss_pred EEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeE-EEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 312 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA-VSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~-v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+..+ .+.+++.++.||.++.+|..+|+.+...+-....+.+ -.+ .+..|..++.||.+..+++
T Consensus 330 sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 330 APVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred CCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence 2222 2346777899999999999999988766533222322 122 2447788899999888765
No 304
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=97.34 E-value=0.27 Score=51.29 Aligned_cols=115 Identities=18% Similarity=0.234 Sum_probs=77.5
Q ss_pred ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCC-CCeEEEEECCCC-cEEEEEeCCCcEEEEEc--
Q 016769 261 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER-PGISGTSIRPDS-KIAATAGWDRRVRIYNY-- 336 (383)
Q Consensus 261 ~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~-~~i~~~~~~p~~-~~l~s~~~dg~i~iwd~-- 336 (383)
...|..+.|++++..|+.--.| .|.+|..... ...++.++.... ..+..+.|+|.. ..+...+.+|.+..++.
T Consensus 304 ~~~v~~l~Wn~ds~iLAv~~~~-~vqLWt~~NY--HWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~ 380 (928)
T PF04762_consen 304 EEKVIELAWNSDSEILAVWLED-RVQLWTRSNY--HWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAW 380 (928)
T ss_pred CceeeEEEECCCCCEEEEEecC-CceEEEeeCC--EEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEE
Confidence 4578999999998887775544 4999987644 445555555432 234558898854 34666666677766544
Q ss_pred --CC----------------CceE----------------EEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 337 --RK----------------GSAL----------------AILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 337 --~~----------------~~~~----------------~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.. |..+ ..+ .-..+|.+++|++++..+|.-..||.|.+|.+.
T Consensus 381 ~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l-~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~ 456 (928)
T PF04762_consen 381 DVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYEL-ELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWD 456 (928)
T ss_pred EEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEE-cCCCCcEEEEEeCCCCeEEEEECCCCEEEEEec
Confidence 11 1111 011 124689999999999889999999999999853
No 305
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.30 E-value=0.0061 Score=59.38 Aligned_cols=130 Identities=17% Similarity=0.175 Sum_probs=89.7
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.++-|+-+|.|.+.+... .+ .....|... +..|.++++|+.||.+.+-.+.+....+... . .-.+.
T Consensus 51 ~~~~GtH~g~v~~~~~~~--~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d--f---~rpik 116 (846)
T KOG2066|consen 51 FFALGTHRGAVYLTTCQG--NP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYD--F---KRPIK 116 (846)
T ss_pred eeeeccccceEEEEecCC--cc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEe--c---CCcce
Confidence 356688899999998643 32 333444433 6678889999999999998776544322221 1 23578
Q ss_pred EEEECCC-----CcEEEEEeCCCcEEEEEcCC-CceE-EEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 312 GTSIRPD-----SKIAATAGWDRRVRIYNYRK-GSAL-AILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~-----~~~l~s~~~dg~i~iwd~~~-~~~~-~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+++++|+ .+.+++||.-| +.++.-.= ++.. ..+..-+++|.++.|. |.++|-++.+| |++||..
T Consensus 117 sial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~ 187 (846)
T KOG2066|consen 117 SIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTP 187 (846)
T ss_pred eEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCC-cEEEecc
Confidence 9999998 46789999888 77765421 1111 1344567899999996 67899998887 8999874
No 306
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.27 E-value=0.00081 Score=60.13 Aligned_cols=76 Identities=11% Similarity=0.215 Sum_probs=65.3
Q ss_pred CCCCeEEEEECCCCc-EEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCCCCC
Q 016769 306 ERPGISGTSIRPDSK-IAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELYPPH 382 (383)
Q Consensus 306 ~~~~i~~~~~~p~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~~~~ 382 (383)
+..-|.+++|+|..+ .+..++.+.+|+|.|+++...+..+..| +++++.+|.-|.. ++-.|-.+|.|.+||+.-|+
T Consensus 192 ~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 192 EGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred cchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence 445688999999877 7888999999999999999988888777 7899999998877 55667789999999998665
No 307
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.26 E-value=0.01 Score=59.46 Aligned_cols=139 Identities=15% Similarity=0.161 Sum_probs=89.5
Q ss_pred EeCCCcEEEEeCCCCCCceeeeecccc-CeEEEEEeCCC-----CceEEEEcCCcEEEEEccCCCCeeEEeeeee-cCCC
Q 016769 236 GYEDGSILVWDIRNPGIPLTAMKVHLE-PVLCLSIDESC-----NGGISGGADQKIVLYNLDHSTGSCVIKKEIN-LERP 308 (383)
Q Consensus 236 g~~dg~i~~wdl~~~~~~~~~~~~h~~-~v~~~~~~~~~-----~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~-~~~~ 308 (383)
......|.--||+.+. .+...+.|.. +|..+..+... ...+.|-.++.+..||.+....+........ ....
T Consensus 500 ~~~~~~ly~mDLe~GK-VV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~ 578 (794)
T PF08553_consen 500 PNNPNKLYKMDLERGK-VVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKN 578 (794)
T ss_pred CCCCCceEEEecCCCc-EEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCC
Confidence 3456677788888754 3555555543 35555553321 2346777889999999875442222111111 1224
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEE-EecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA-ILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
..+|++-+.+| +||.|+.+|.||+||- .++..+ .+.+-..+|..|..+.||++++... +..+-|.+.
T Consensus 579 ~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 579 NFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred CceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 57788877776 7899999999999995 344343 3446678999999999999766554 345666654
No 308
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.18 E-value=0.0022 Score=60.44 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=58.6
Q ss_pred cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC
Q 016769 260 HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 260 h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~ 338 (383)
....+.+.+++++...++.|+.||+|.+||......... + ..-..+.+++||+|.++++|+..|.+.+||+.-
T Consensus 258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~--k----a~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA--K----AEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred cCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee--e----ecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 345788999999999999999999999999865432211 1 112467899999999999999999999999953
No 309
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.18 E-value=0.027 Score=56.46 Aligned_cols=146 Identities=16% Similarity=0.150 Sum_probs=88.0
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCC---ceEEEEEeCCCcEEEEeC
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQG---FVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~sg~~dg~i~~wdl 247 (383)
..++....+.+.++--||++++.+..-.-+. ... +..+.|..... ....+.|-.+..+..||.
T Consensus 494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~---------~~~-----v~~~~p~~K~aqlt~e~tflGls~n~lfriDp 559 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHD---------DIP-----VVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDP 559 (794)
T ss_pred ceEeecCCCCCceEEEecCCCcEEEEeecCC---------Ccc-----eeEecccccccccCCCceEEEECCCceEEecc
Confidence 3445544455678888888888665432111 000 11222221000 113567888999999999
Q ss_pred CCCCCceeeeecc----ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEE
Q 016769 248 RNPGIPLTAMKVH----LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAA 323 (383)
Q Consensus 248 ~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~ 323 (383)
|-.+..+..-+.| .....|++-..+| .++.|+.+|.||+||-. +.. .+..+..-...|.++.++.||++|+
T Consensus 560 R~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~---g~~-AKT~lp~lG~pI~~iDvt~DGkwil 634 (794)
T PF08553_consen 560 RLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRL---GKR-AKTALPGLGDPIIGIDVTADGKWIL 634 (794)
T ss_pred CCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeeccc---chh-hhhcCCCCCCCeeEEEecCCCcEEE
Confidence 8754322221222 2245666666555 57999999999999832 211 2223344457899999999999988
Q ss_pred EEeCCCcEEEEEc
Q 016769 324 TAGWDRRVRIYNY 336 (383)
Q Consensus 324 s~~~dg~i~iwd~ 336 (383)
+++ +..+.+++.
T Consensus 635 aTc-~tyLlLi~t 646 (794)
T PF08553_consen 635 ATC-KTYLLLIDT 646 (794)
T ss_pred Eee-cceEEEEEE
Confidence 766 667778876
No 310
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=97.17 E-value=0.0036 Score=52.95 Aligned_cols=60 Identities=20% Similarity=0.367 Sum_probs=51.5
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEcc
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLD 291 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~ 291 (383)
.++.|++||.+-+||.++...|...++.|..++.-+-|+|+.. .|++++.||.+--||-.
T Consensus 194 ~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 194 LVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAS 254 (319)
T ss_pred EEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCC
Confidence 4677999999999999987777788899999999999988654 68999999998888753
No 311
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.13 E-value=0.2 Score=45.61 Aligned_cols=133 Identities=18% Similarity=0.247 Sum_probs=83.2
Q ss_pred CcEEEEeCCCC-C--Cceeee--eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEE
Q 016769 240 GSILVWDIRNP-G--IPLTAM--KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 240 g~i~~wdl~~~-~--~~~~~~--~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~ 314 (383)
|.|.++++.+. . ..+..+ ....++|.++..-. .. +..+.++.|.+|+++... ........... ..+.++.
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~~--~~-lv~~~g~~l~v~~l~~~~-~l~~~~~~~~~-~~i~sl~ 136 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSFN--GR-LVVAVGNKLYVYDLDNSK-TLLKKAFYDSP-FYITSLS 136 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEET--TE-EEEEETTEEEEEEEETTS-SEEEEEEE-BS-SSEEEEE
T ss_pred cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhhC--CE-EEEeecCEEEEEEccCcc-cchhhheecce-EEEEEEe
Confidence 88999999873 1 112222 23356888877652 23 455567899999998765 12211222222 2455554
Q ss_pred ECCCCcEEEEEeCCCcEEEEEcCC-CceEEEec--ccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 315 IRPDSKIAATAGWDRRVRIYNYRK-GSALAILK--YHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 315 ~~p~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~--~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.. +.+++.|...+.+.++..+. ++.+..+. .....+.++.|-+|++.++.+..+|.+.++...
T Consensus 137 ~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 137 VF--KNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EE--TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred cc--ccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 44 45899999999999886643 33343332 245678889998777899999999999999885
No 312
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.12 E-value=0.068 Score=46.07 Aligned_cols=148 Identities=13% Similarity=0.062 Sum_probs=81.2
Q ss_pred cceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeec
Q 016769 180 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV 259 (383)
Q Consensus 180 ~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~ 259 (383)
+++|..||.++++.+-+..-.. . .....+..+. . ...+++++.++.|..||..++.. +-....
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~-------~-~~~~~~~~~~----~----~~~v~~~~~~~~l~~~d~~tG~~-~W~~~~ 64 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGP-------G-IGGPVATAVP----D----GGRVYVASGDGNLYALDAKTGKV-LWRFDL 64 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSS-------S-CSSEEETEEE----E----TTEEEEEETTSEEEEEETTTSEE-EEEEEC
T ss_pred CCEEEEEECCCCCEEEEEECCC-------C-CCCccceEEE----e----CCEEEEEcCCCEEEEEECCCCCE-EEEeec
Confidence 4688999999988876664210 0 0111111110 0 12467778999999999877532 222221
Q ss_pred cccCeEE-EEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEe-eeeecC-CCCeEEEEECCCCcEEEEEeCCCcEEEEEc
Q 016769 260 HLEPVLC-LSIDESCNGGISGGADQKIVLYNLDHSTGSCVIK-KEINLE-RPGISGTSIRPDSKIAATAGWDRRVRIYNY 336 (383)
Q Consensus 260 h~~~v~~-~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~-~~~~~~-~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~ 336 (383)
..++.. .... ...++.++.++.+..+|..+. ..... ...... ...........++..++.+..++.|..+|+
T Consensus 65 -~~~~~~~~~~~--~~~v~v~~~~~~l~~~d~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 139 (238)
T PF13360_consen 65 -PGPISGAPVVD--GGRVYVGTSDGSLYALDAKTG--KVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDP 139 (238)
T ss_dssp -SSCGGSGEEEE--TTEEEEEETTSEEEEEETTTS--CEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEET
T ss_pred -cccccceeeec--ccccccccceeeeEecccCCc--ceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEec
Confidence 111111 1222 234566668888888886543 44333 111111 011112222223677888888999999999
Q ss_pred CCCceEEEecccc
Q 016769 337 RKGSALAILKYHH 349 (383)
Q Consensus 337 ~~~~~~~~~~~h~ 349 (383)
.+|+.+.......
T Consensus 140 ~tG~~~w~~~~~~ 152 (238)
T PF13360_consen 140 KTGKLLWKYPVGE 152 (238)
T ss_dssp TTTEEEEEEESST
T ss_pred CCCcEEEEeecCC
Confidence 9999987765533
No 313
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.11 E-value=0.18 Score=49.19 Aligned_cols=95 Identities=17% Similarity=0.223 Sum_probs=63.4
Q ss_pred CCcEEEEEccCCC--CeeEEeeeeecCCCCeEEEEECCCCcEEEEEe-CCCcEEEEEcCCCce------------EEEec
Q 016769 282 DQKIVLYNLDHST--GSCVIKKEINLERPGISGTSIRPDSKIAATAG-WDRRVRIYNYRKGSA------------LAILK 346 (383)
Q Consensus 282 d~~i~~wdl~~~~--~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~-~dg~i~iwd~~~~~~------------~~~~~ 346 (383)
++.|.+.|..... +.. ....+. -.....+++++|||+++++++ .+.++.+.|+.+.+. .....
T Consensus 295 gn~V~VID~~t~~~~~~~-v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaeve 372 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSA-LTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPE 372 (635)
T ss_pred CCEEEEEECCccccCCcc-eEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeec
Confidence 4567777765410 111 111121 223567899999999876665 599999999987553 22222
Q ss_pred ccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 347 YHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 347 ~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
- .......+|.++|+...|---|..|-.||+.
T Consensus 373 v-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~ 404 (635)
T PRK02888 373 L-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIE 404 (635)
T ss_pred c-CCCcceEEECCCCCEEEeEeecceeEEEehH
Confidence 2 1223567899999999999999999999985
No 314
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.01 E-value=0.0041 Score=59.66 Aligned_cols=110 Identities=18% Similarity=0.123 Sum_probs=78.9
Q ss_pred EEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCce---EE
Q 016769 267 LSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA---LA 343 (383)
Q Consensus 267 ~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~---~~ 343 (383)
-.++....+++.|+.-|.+.+|+-... . +++.......+.+....++++..++|+|+..|.|.+|-+....+ ..
T Consensus 39 Tc~dst~~~l~~GsS~G~lyl~~R~~~--~-~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~ 115 (726)
T KOG3621|consen 39 TCVDATEEYLAMGSSAGSVYLYNRHTG--E-MRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDY 115 (726)
T ss_pred EEeecCCceEEEecccceEEEEecCch--h-hhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCccee
Confidence 344666677888888999999974321 1 11111112334466677899999999999999999998865322 11
Q ss_pred --E-ecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 344 --I-LKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 344 --~-~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
. -+.|...|.+++|++|+..|.+|..-|.|.+-.++
T Consensus 116 ~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~ 154 (726)
T KOG3621|consen 116 VTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELD 154 (726)
T ss_pred eccccccCCceEEEEEecccccEEeecCCCceEEEEEec
Confidence 1 12478899999999999999999999999876664
No 315
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=96.93 E-value=0.36 Score=45.32 Aligned_cols=173 Identities=11% Similarity=0.071 Sum_probs=91.1
Q ss_pred CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCcee-e
Q 016769 178 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT-A 256 (383)
Q Consensus 178 ~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~-~ 256 (383)
..++.+...|.++++.+-+...... .... .+....+. ..+ .++.++.+|.+...|..++...-. .
T Consensus 167 ~~~g~l~ald~~tG~~~W~~~~~~~----~~~~--~~~~sP~v------~~~--~v~~~~~~g~v~a~d~~~G~~~W~~~ 232 (394)
T PRK11138 167 TSNGMLQALNESDGAVKWTVNLDVP----SLTL--RGESAPAT------AFG--GAIVGGDNGRVSAVLMEQGQLIWQQR 232 (394)
T ss_pred CCCCEEEEEEccCCCEeeeecCCCC----cccc--cCCCCCEE------ECC--EEEEEcCCCEEEEEEccCChhhheec
Confidence 4457888899999887766543210 0000 00000000 011 355677788888888776432100 0
Q ss_pred eec-------------cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEE
Q 016769 257 MKV-------------HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAA 323 (383)
Q Consensus 257 ~~~-------------h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~ 323 (383)
+.. ...|+ +. +..++.++.++.+...|+.+. ....+... .....+.. ++..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~sP~----v~--~~~vy~~~~~g~l~ald~~tG--~~~W~~~~----~~~~~~~~--~~~~vy 298 (394)
T PRK11138 233 ISQPTGATEIDRLVDVDTTPV----VV--GGVVYALAYNGNLVALDLRSG--QIVWKREY----GSVNDFAV--DGGRIY 298 (394)
T ss_pred cccCCCccchhcccccCCCcE----EE--CCEEEEEEcCCeEEEEECCCC--CEEEeecC----CCccCcEE--ECCEEE
Confidence 000 01111 11 234566778888888877643 33332221 11111222 345666
Q ss_pred EEeCCCcEEEEEcCCCceEEEeccccc-ceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 324 TAGWDRRVRIYNYRKGSALAILKYHHA-TCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 324 s~~~dg~i~iwd~~~~~~~~~~~~h~~-~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.++.||.+..+|..+++.+.....-.. ...+..+ .+.+|..++.||.+.+.|..+
T Consensus 299 ~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~t 354 (394)
T PRK11138 299 LVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINRED 354 (394)
T ss_pred EEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCC
Confidence 778899999999999987764321111 1122222 244667788899988887654
No 316
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=96.87 E-value=0.08 Score=51.83 Aligned_cols=193 Identities=11% Similarity=0.153 Sum_probs=111.5
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCC
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 250 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~ 250 (383)
..++++++..|.|-+||......+..+.+... + ..-+| +.+.+...+..+++-+.-.+|-+|+..++
T Consensus 79 ~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~-------~-~qdl~-----W~~~rd~Srd~LlaIh~ss~lvLwntdtG 145 (1062)
T KOG1912|consen 79 QLLIASADISGRIILVDFVLASVINWLSHSND-------S-VQDLC-----WVPARDDSRDVLLAIHGSSTLVLWNTDTG 145 (1062)
T ss_pred ceeEEeccccCcEEEEEehhhhhhhhhcCCCc-------c-hhhee-----eeeccCcchheeEEecCCcEEEEEEccCC
Confidence 45778888889999999988877766654221 0 11122 23333333334555566788999987764
Q ss_pred CCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEc-cCC--C--CeeEEeeee-------ecC---CCC-----
Q 016769 251 GIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNL-DHS--T--GSCVIKKEI-------NLE---RPG----- 309 (383)
Q Consensus 251 ~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl-~~~--~--~~~~~~~~~-------~~~---~~~----- 309 (383)
.. +=......+...|+.+||-.. .+..-+..|.+.+-+. ... . ++..+...- +.+ ...
T Consensus 146 ~k-~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~ 224 (1062)
T KOG1912|consen 146 EK-FWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTP 224 (1062)
T ss_pred ce-eeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCC
Confidence 32 211222234556677777443 2333333444433322 110 1 111110000 000 000
Q ss_pred --------eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC--EEEEEeCCCcEEEEe
Q 016769 310 --------ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK--LMASASEDSTVALWE 377 (383)
Q Consensus 310 --------i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~--~las~s~d~~i~~w~ 377 (383)
...++|+|--+-+.-....+.+.++|++-..++....-..+.+.-+.+-|+++ .|.+.-.||.+.+|-
T Consensus 225 ~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirv 302 (1062)
T KOG1912|consen 225 ASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRV 302 (1062)
T ss_pred cchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEE
Confidence 12356788765444456788999999998888877755566677788888876 799999999999994
No 317
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=96.86 E-value=0.0059 Score=57.94 Aligned_cols=73 Identities=18% Similarity=0.177 Sum_probs=63.0
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccccccee-EEEEeCCCCEEEEEeCCCcEEEEeCCCCC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN-AVSFSSDCKLMASASEDSTVALWELYPPH 382 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~v~~spd~~~las~s~d~~i~~w~~~~~~ 382 (383)
.+.-+.++|--..+|.+..+|.+-+..+. -+.+.++.-|...+. +++|.|||+.||.|=.||+|++-|+..++
T Consensus 22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence 35567788888899999999999998887 777888876777776 99999999999999999999999998664
No 318
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.83 E-value=0.19 Score=43.81 Aligned_cols=104 Identities=13% Similarity=0.159 Sum_probs=71.9
Q ss_pred ccCeEEEEEeCCCCceE-EEEcCCcEEEEEccCCCCeeEEeee-eecCC--CCeEEEEECCCCcEEEEEeCCCcEEEEEc
Q 016769 261 LEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTGSCVIKKE-INLER--PGISGTSIRPDSKIAATAGWDRRVRIYNY 336 (383)
Q Consensus 261 ~~~v~~~~~~~~~~~~~-s~~~d~~i~~wdl~~~~~~~~~~~~-~~~~~--~~i~~~~~~p~~~~l~s~~~dg~i~iwd~ 336 (383)
....+.+.|+++++.++ +-+..+.|..++++........... ..... +..-++++..+|++.++.-..+.|.++|.
T Consensus 133 ~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p 212 (246)
T PF08450_consen 133 LGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDP 212 (246)
T ss_dssp ESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEET
T ss_pred cccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECC
Confidence 34457899999998775 5566788999998765542211111 12222 24778999999998888778999999999
Q ss_pred CCCceEEEecccccceeEEEEe-CCCCEEE
Q 016769 337 RKGSALAILKYHHATCNAVSFS-SDCKLMA 365 (383)
Q Consensus 337 ~~~~~~~~~~~h~~~v~~v~~s-pd~~~la 365 (383)
+ |+.+..+.--...+.+++|. ||.+.|.
T Consensus 213 ~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~ 241 (246)
T PF08450_consen 213 D-GKLLREIELPVPRPTNCAFGGPDGKTLY 241 (246)
T ss_dssp T-SCEEEEEE-SSSSEEEEEEESTTSSEEE
T ss_pred C-ccEEEEEcCCCCCEEEEEEECCCCCEEE
Confidence 7 88887776555588999995 6766443
No 319
>PRK04043 tolB translocation protein TolB; Provisional
Probab=96.80 E-value=0.18 Score=47.64 Aligned_cols=110 Identities=9% Similarity=-0.011 Sum_probs=64.5
Q ss_pred CeEEEEEeCCCCc-eEEEEcC---CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE-eCC--CcEEEEE
Q 016769 263 PVLCLSIDESCNG-GISGGAD---QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA-GWD--RRVRIYN 335 (383)
Q Consensus 263 ~v~~~~~~~~~~~-~~s~~~d---~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~-~~d--g~i~iwd 335 (383)
.+....|+|+++. ++..+.+ ..|.++|+.......+ ....+......|+|||+.++-. +.+ ..|.++|
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~l-----t~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d 263 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKI-----ASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYD 263 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEE-----ecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEE
Confidence 6677888999875 4433333 4477777754432211 1122335567899999866543 333 4677778
Q ss_pred cCCCceEEEecccccceeEEEEeCCCCEEEEEe-CCCc--EEEEeC
Q 016769 336 YRKGSALAILKYHHATCNAVSFSSDCKLMASAS-EDST--VALWEL 378 (383)
Q Consensus 336 ~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s-~d~~--i~~w~~ 378 (383)
+..++. ..+..+......-.|+|||+.|+..+ ..+. |.+.|+
T Consensus 264 l~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl 308 (419)
T PRK04043 264 TNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKL 308 (419)
T ss_pred CCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEEC
Confidence 877653 33433433233457999999776655 3444 444444
No 320
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=96.78 E-value=0.32 Score=43.21 Aligned_cols=108 Identities=13% Similarity=0.150 Sum_probs=64.1
Q ss_pred ccccCeEEEEEeCCCCceEEEEcCCc-------EEEEEccCCCCeeEEeee---eecCCCCeEEEEECCCCcEEEEEe-C
Q 016769 259 VHLEPVLCLSIDESCNGGISGGADQK-------IVLYNLDHSTGSCVIKKE---INLERPGISGTSIRPDSKIAATAG-W 327 (383)
Q Consensus 259 ~h~~~v~~~~~~~~~~~~~s~~~d~~-------i~~wdl~~~~~~~~~~~~---~~~~~~~i~~~~~~p~~~~l~s~~-~ 327 (383)
.|.-.++-+++++++..++..=..+. +.+++-. +....+... .....+.+-++++++++.+++++| .
T Consensus 160 ~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g--~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPr 237 (305)
T PF07433_consen 160 LHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRG--GALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPR 237 (305)
T ss_pred ccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCC--CcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCC
Confidence 36667888888887764433221111 1222211 111111100 112336789999999998775555 6
Q ss_pred CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCC
Q 016769 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~ 371 (383)
-+.+.+||..+++.+.... -..+..++-.+++ +++|.+...
T Consensus 238 Gg~~~~~d~~tg~~~~~~~--l~D~cGva~~~~~-f~~ssG~G~ 278 (305)
T PF07433_consen 238 GGRVAVWDAATGRLLGSVP--LPDACGVAPTDDG-FLVSSGQGQ 278 (305)
T ss_pred CCEEEEEECCCCCEeeccc--cCceeeeeecCCc-eEEeCCCcc
Confidence 8899999999999886543 3456667766665 666665543
No 321
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=96.74 E-value=0.012 Score=58.19 Aligned_cols=140 Identities=18% Similarity=0.226 Sum_probs=89.8
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeC---------CCc
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE---------DGS 241 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~---------dg~ 241 (383)
++++ .|+..|+|-+=|+.+.+.+.++.-+.... ..++..+. .+++|+. |.-
T Consensus 188 r~lf-~G~t~G~V~LrD~~s~~~iht~~aHs~si-SDfDv~GN------------------lLitCG~S~R~~~l~~D~F 247 (1118)
T KOG1275|consen 188 RNLF-CGDTRGTVFLRDPNSFETIHTFDAHSGSI-SDFDVQGN------------------LLITCGYSMRRYNLAMDPF 247 (1118)
T ss_pred cEEE-eecccceEEeecCCcCceeeeeeccccce-eeeeccCC------------------eEEEeecccccccccccch
Confidence 4444 46788999999999888777665321100 01222221 2344333 556
Q ss_pred EEEEeCCCCCCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEE---ccCCCCeeEEeeeeecCCCCeEEEEECC
Q 016769 242 ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYN---LDHSTGSCVIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 242 i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wd---l~~~~~~~~~~~~~~~~~~~i~~~~~~p 317 (383)
|++||+|.-+ .+..++.+..| ..+.|.|+.. .++.++..|...+-| +..+. .-.+......+.+..+.+++
T Consensus 248 vkVYDLRmmr-al~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~---~~~~~v~p~~s~i~~fDiSs 322 (1118)
T KOG1275|consen 248 VKVYDLRMMR-ALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPP---AGVKMVNPNGSGISAFDISS 322 (1118)
T ss_pred hhhhhhhhhh-ccCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCCc---cceeEEccCCCcceeEEecC
Confidence 8999998733 24445555555 4456666654 456777888888877 43332 11223344556799999999
Q ss_pred CCcEEEEEeCCCcEEEEE
Q 016769 318 DSKIAATAGWDRRVRIYN 335 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd 335 (383)
++..+|-|..+|.|.+|-
T Consensus 323 n~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 323 NGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred CCceEEEecccCcEeeec
Confidence 999999999999999997
No 322
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=96.72 E-value=0.029 Score=52.59 Aligned_cols=107 Identities=13% Similarity=0.123 Sum_probs=73.2
Q ss_pred eEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC-----------CcEE
Q 016769 264 VLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----------RRVR 332 (383)
Q Consensus 264 v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d-----------g~i~ 332 (383)
-+.+.|+|.|.++++--..| |.+|-=.+... .......++.-+.|||+.+||++-+.. ..+.
T Consensus 213 etyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r------~~RF~Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~ 285 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQG-IALWGGESFDR------IQRFYHPGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLI 285 (698)
T ss_pred eeeEEecCCceEEEEEeccc-eeeecCccHHH------HHhccCCCceeeecCCccceEEEecCCccccCcccCCCceEE
Confidence 35688899999888765544 88894222111 111122468889999999999998742 5789
Q ss_pred EEEcCCCceEEEecc--ccccee-EEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 333 IYNYRKGSALAILKY--HHATCN-AVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 333 iwd~~~~~~~~~~~~--h~~~v~-~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
|||+.+|.....+.. -...++ -..||-|++++|--..| .|.|++.
T Consensus 286 IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-sisIyEt 333 (698)
T KOG2314|consen 286 IWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-SISIYET 333 (698)
T ss_pred EEEccccchhcceeccCCCccccceEEeccCCceeEEeccc-eEEEEec
Confidence 999999987665543 222222 24799999999987775 5778764
No 323
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.71 E-value=0.049 Score=53.80 Aligned_cols=146 Identities=18% Similarity=0.197 Sum_probs=90.7
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccC-eEEEEEeCCCCceEEEEcCC-----cEEEEEccCCC--C--eeE---
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEP-VLCLSIDESCNGGISGGADQ-----KIVLYNLDHST--G--SCV--- 298 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~s~~~d~-----~i~~wdl~~~~--~--~~~--- 298 (383)
.++.|+.+|.|-+.+ +....+..++.+... |..+........+++.+-|+ .+++|+++... . .+.
T Consensus 37 ~vvigt~~G~V~~Ln--~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ 114 (933)
T KOG2114|consen 37 SVVIGTADGRVVILN--SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEH 114 (933)
T ss_pred eEEEeeccccEEEec--ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcceeeee
Confidence 477899999887775 222333556666666 55554454444566655543 47999997542 1 122
Q ss_pred Eeeee--ecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcC----CCceEEEecccccceeEEEEeCCCCEEEEEeCCCc
Q 016769 299 IKKEI--NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR----KGSALAILKYHHATCNAVSFSSDCKLMASASEDST 372 (383)
Q Consensus 299 ~~~~~--~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~ 372 (383)
..... ......++.++++.+-+.+|+|=.||.|..+.-+ .+....-...-..+|+.++|..|++.+..+..-..
T Consensus 115 ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~ 194 (933)
T KOG2114|consen 115 RIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQ 194 (933)
T ss_pred eeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecce
Confidence 11111 1234568899999999999999999999988542 22222222224568999999999886333333345
Q ss_pred EEEEeCC
Q 016769 373 VALWELY 379 (383)
Q Consensus 373 i~~w~~~ 379 (383)
|.+|.+.
T Consensus 195 V~~y~l~ 201 (933)
T KOG2114|consen 195 VMLYSLS 201 (933)
T ss_pred eEEEEec
Confidence 7777763
No 324
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.64 E-value=0.15 Score=50.59 Aligned_cols=135 Identities=19% Similarity=0.284 Sum_probs=85.3
Q ss_pred cEEEEeCCCC--CC-cee----ee---ecc--ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 241 SILVWDIRNP--GI-PLT----AM---KVH--LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 241 ~i~~wdl~~~--~~-~~~----~~---~~h--~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
.|++||++.- .. |.. .+ +.. ..|+.+++++.+...++.|=.+|.|.++.=+....+............
T Consensus 93 llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~ 172 (933)
T KOG2114|consen 93 LLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKE 172 (933)
T ss_pred EEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCC
Confidence 5899998642 11 211 11 222 357888999888666666667888887743221111111111233456
Q ss_pred CeEEEEECCCCcE--EEEEeCCCcEEEEEcCCCce--EEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 309 GISGTSIRPDSKI--AATAGWDRRVRIYNYRKGSA--LAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 309 ~i~~~~~~p~~~~--l~s~~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.|++++|..+++. +|++ -..|.+|.+. ++. ...+..|....+|.+|++....+++++. ..+.+|+..
T Consensus 173 pITgL~~~~d~~s~lFv~T--t~~V~~y~l~-gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd 243 (933)
T KOG2114|consen 173 PITGLALRSDGKSVLFVAT--TEQVMLYSLS-GRTPSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSD 243 (933)
T ss_pred CceeeEEecCCceeEEEEe--cceeEEEEec-CCCcceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCC
Confidence 8999999988876 4433 4569999996 443 4567888889999999876554555554 468888764
No 325
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=96.31 E-value=0.019 Score=52.40 Aligned_cols=145 Identities=14% Similarity=0.137 Sum_probs=96.4
Q ss_pred EEEEEeCCCcEEEEeCCC-CC-CceeeeeccccCeEEEEEeCCCCceEEEEc-CCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 232 NVLAGYEDGSILVWDIRN-PG-IPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~-~~-~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
..++++.||.++.|.-.- .+ ..+.-+..|...+..+..+-++..+.|.+. |..++++|+.+..-...++... -.
T Consensus 22 fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~---lP 98 (558)
T KOG0882|consen 22 FIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVD---LP 98 (558)
T ss_pred eEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhccccc---CC
Confidence 467899999999996321 11 112233457777777777777766777666 9999999987654332322110 11
Q ss_pred CeEEEEECCCC---cEEEEEeCCCcEEEEEcCCCc--eEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 309 GISGTSIRPDS---KIAATAGWDRRVRIYNYRKGS--ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 309 ~i~~~~~~p~~---~~l~s~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+......+|.. ..-++.-.++.|.++|-.... ....-+-|..+|..+..+|-+..++|....|+|+-|...
T Consensus 99 g~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e 174 (558)
T KOG0882|consen 99 GFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAE 174 (558)
T ss_pred CceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCC
Confidence 22222333332 233334468899999985433 233445599999999999999999999999999999886
No 326
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.27 E-value=0.3 Score=36.20 Aligned_cols=91 Identities=19% Similarity=0.184 Sum_probs=60.9
Q ss_pred CceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccccccee
Q 016769 274 NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN 353 (383)
Q Consensus 274 ~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 353 (383)
+.|+.|+.|..|++|+=+. . ..++ .+...+..+.-... ..|+-+-.+|+|-+|+- ...++..+.-.. +.
T Consensus 16 ~eLlvGs~D~~IRvf~~~e-----~-~~Ei-~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~RlWRiKSK~~-~~ 84 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGDE-----I-VAEI-TETDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQRLWRIKSKNQ-VT 84 (111)
T ss_pred ceEEEecCCcEEEEEeCCc-----E-EEEE-ecccceEEEEEcCC-CEEEEEecCCEEEEEeC--cceeeeeccCCC-eE
Confidence 3589999999999996321 1 1122 23356777777655 45788899999999977 455666654333 55
Q ss_pred EEEEe---CCCC-EEEEEeCCCcEEE
Q 016769 354 AVSFS---SDCK-LMASASEDSTVAL 375 (383)
Q Consensus 354 ~v~~s---pd~~-~las~s~d~~i~~ 375 (383)
++++. -||. -|++|-.+|.|.+
T Consensus 85 ~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 85 SMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred EEEEEcCCCCCceEEEEEecCCeEEe
Confidence 55543 3443 7999999998754
No 327
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.22 E-value=0.092 Score=49.26 Aligned_cols=139 Identities=12% Similarity=0.133 Sum_probs=83.0
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCC--CCce-----EEEEcCCcEEEEEccCCCCeeEEeee-ee
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDES--CNGG-----ISGGADQKIVLYNLDHSTGSCVIKKE-IN 304 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~-----~s~~~d~~i~~wdl~~~~~~~~~~~~-~~ 304 (383)
+.++.....|.--|++.+. .+..-+.|-. |.-+.+.++ +..+ +.|-.|+.|..||.+......+.... ..
T Consensus 349 l~~~~~~~~l~klDIE~GK-IVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kq 426 (644)
T KOG2395|consen 349 LMDGGEQDKLYKLDIERGK-IVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQ 426 (644)
T ss_pred eeCCCCcCcceeeecccce-eeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccc
Confidence 3456666667777777643 3444554444 333333222 2222 55677899999998754331111111 11
Q ss_pred c-CCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEE-EecccccceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 305 L-ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA-ILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 305 ~-~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
+ .....+|++-..+| +||.||.+|.||+||- .+...+ .+.+-..+|..|..+.||++++.... .++-|-
T Consensus 427 y~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~-tyLlLi 497 (644)
T KOG2395|consen 427 YSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCK-TYLLLI 497 (644)
T ss_pred cccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEecc-cEEEEE
Confidence 1 11234555555555 8899999999999998 554443 45567789999999999997765543 344443
No 328
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=96.21 E-value=2 Score=45.03 Aligned_cols=72 Identities=15% Similarity=0.262 Sum_probs=49.3
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCce--------EEEecc----------cccceeEEEEeCCCCEEEEEeC
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA--------LAILKY----------HHATCNAVSFSSDCKLMASASE 369 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~--------~~~~~~----------h~~~v~~v~~spd~~~las~s~ 369 (383)
..|..++|++++..+++-..||+|.+|....... ...+.. -...+..++|..+...++....
T Consensus 427 ~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (928)
T PF04762_consen 427 SPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDS 506 (928)
T ss_pred CCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEec
Confidence 5699999999998889999999999998643211 111111 1335677888777776665555
Q ss_pred C---CcEEEEeCC
Q 016769 370 D---STVALWELY 379 (383)
Q Consensus 370 d---~~i~~w~~~ 379 (383)
+ ..+.++++.
T Consensus 507 ~~~~~~i~~~~~~ 519 (928)
T PF04762_consen 507 DSNQSKIVLVDID 519 (928)
T ss_pred CcccceEEEEEec
Confidence 4 677777764
No 329
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.14 E-value=0.33 Score=36.00 Aligned_cols=91 Identities=13% Similarity=0.074 Sum_probs=55.3
Q ss_pred ceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 230 ~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
...|++|++|..||+|+=. ..+..++. .+.|..+..... ..++.+-..|+|.+|+-.. .++ ..+.. ..
T Consensus 15 ~~eLlvGs~D~~IRvf~~~---e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~----RlW--RiKSK-~~ 82 (111)
T PF14783_consen 15 ENELLVGSDDFEIRVFKGD---EIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRSQ----RLW--RIKSK-NQ 82 (111)
T ss_pred cceEEEecCCcEEEEEeCC---cEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCcc----eee--eeccC-CC
Confidence 3579999999999999732 33444543 456666665444 4577888899998886421 111 11211 22
Q ss_pred eEEEEE---CCCC-cEEEEEeCCCcEE
Q 016769 310 ISGTSI---RPDS-KIAATAGWDRRVR 332 (383)
Q Consensus 310 i~~~~~---~p~~-~~l~s~~~dg~i~ 332 (383)
+.++.+ ..|| +-|++|-.+|+|-
T Consensus 83 ~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 83 VTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 444443 3333 3688888888774
No 330
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=96.13 E-value=0.043 Score=52.36 Aligned_cols=91 Identities=13% Similarity=0.163 Sum_probs=60.8
Q ss_pred eEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCe-EEEEECCCCcEEEEEeCCCcEEEEEcCCCceE
Q 016769 264 VLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI-SGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL 342 (383)
Q Consensus 264 v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i-~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~ 342 (383)
+..+.|+|..+.+|.+..+|.+.+..++- .... ....+...+ ++++|.|||+.+|.|-.||+|++-|..++..+
T Consensus 23 i~~~ewnP~~dLiA~~t~~gelli~R~n~---qRlw--tip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l 97 (665)
T KOG4640|consen 23 IKRIEWNPKMDLIATRTEKGELLIHRLNW---QRLW--TIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRL 97 (665)
T ss_pred eEEEEEcCccchhheeccCCcEEEEEecc---ceeE--eccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCce
Confidence 34455666666667777777666654441 1111 112122234 49999999999999999999999999998877
Q ss_pred EEe-cccccceeEEEEeC
Q 016769 343 AIL-KYHHATCNAVSFSS 359 (383)
Q Consensus 343 ~~~-~~h~~~v~~v~~sp 359 (383)
... .....+|.++-|.|
T Consensus 98 ~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 98 VSFLFSVETDISKGIWDR 115 (665)
T ss_pred eccccccccchheeeccc
Confidence 542 23456778877863
No 331
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=96.12 E-value=0.0036 Score=61.65 Aligned_cols=139 Identities=14% Similarity=0.197 Sum_probs=92.6
Q ss_pred eEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc-CC-cEEEEEccCCCCeeEEeeeeecCCC
Q 016769 231 VNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQ-KIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 231 ~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~-d~-~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
.+++.|+-.|.|++++..++ ........|..+|+.+..+.++...++.+. .. -..+|++.. ..... ..+ .
T Consensus 1114 ~hL~vG~~~Geik~~nv~sG-~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s-~~~~~----Hsf--~ 1185 (1516)
T KOG1832|consen 1114 NHLAVGSHAGEIKIFNVSSG-SMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASS-TGGPR----HSF--D 1185 (1516)
T ss_pred ceEEeeeccceEEEEEccCc-cccccccccccccccccccCCcceeeeeccccCchHHHhcccc-ccCcc----ccc--c
Confidence 46889999999999998874 445566789999999988777776555443 33 357998864 11111 111 2
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEec----ccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCCC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK----YHHATCNAVSFSSDCKLMASASEDSTVALWELYPPH 382 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~~ 382 (383)
+-.++.|+..-++-+.|+.-....+||+.++.++.++- +....-+++.|||+.+++.- || -+||+..|.
T Consensus 1186 ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln---dG--vLWDvR~~~ 1258 (1516)
T KOG1832|consen 1186 EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN---DG--VLWDVRIPE 1258 (1516)
T ss_pred ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee---Cc--eeeeeccHH
Confidence 34567787665555556666778899999987765421 11122267789999887653 44 689887653
No 332
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.03 E-value=0.021 Score=35.32 Aligned_cols=30 Identities=20% Similarity=0.362 Sum_probs=28.0
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeC
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDT 47 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~ 47 (383)
...|.+++|+|..++||.|..||.|.|+.+
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 357999999999999999999999999998
No 333
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=95.97 E-value=0.025 Score=34.91 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=28.0
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 349 HATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 349 ~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
...|.+++|+|...+||.|+.||.|.++.+.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4568999999999999999999999999873
No 334
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.97 E-value=0.042 Score=53.81 Aligned_cols=88 Identities=11% Similarity=0.041 Sum_probs=63.5
Q ss_pred ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeE
Q 016769 275 GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA 354 (383)
Q Consensus 275 ~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 354 (383)
.++-|..+|.+.+.+.+... . ....++.. .-+|.|+++++.||+|.|.-+.+.+...++. ...++.+
T Consensus 51 ~~~~GtH~g~v~~~~~~~~~-~-----~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiks 117 (846)
T KOG2066|consen 51 FFALGTHRGAVYLTTCQGNP-K-----TNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKS 117 (846)
T ss_pred eeeeccccceEEEEecCCcc-c-----cccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEe-cCCccee
Confidence 46777888888888765321 0 11111111 4578999999999999999998877665554 5678999
Q ss_pred EEEeCC-----CCEEEEEeCCCcEEEE
Q 016769 355 VSFSSD-----CKLMASASEDSTVALW 376 (383)
Q Consensus 355 v~~spd-----~~~las~s~d~~i~~w 376 (383)
|+++|| .+++++|+.-| +.++
T Consensus 118 ial~Pd~~~~~sk~fv~GG~ag-lvL~ 143 (846)
T KOG2066|consen 118 IALHPDFSRQQSKQFVSGGMAG-LVLS 143 (846)
T ss_pred EEeccchhhhhhhheeecCcce-EEEe
Confidence 999998 56889999887 5554
No 335
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=95.75 E-value=1.1 Score=46.49 Aligned_cols=108 Identities=15% Similarity=0.220 Sum_probs=67.8
Q ss_pred EEEEeCCCCceEEE----EcC-CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe---CCCcEEEEEcC
Q 016769 266 CLSIDESCNGGISG----GAD-QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG---WDRRVRIYNYR 337 (383)
Q Consensus 266 ~~~~~~~~~~~~s~----~~d-~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~---~dg~i~iwd~~ 337 (383)
.++|-.++.++++. ..+ ..|++||-+. . +...-....+.-.++++.|.|..+++-. +|++|.+|.-+
T Consensus 200 ~IsWRgDg~~fAVs~~~~~~~~RkirV~drEg-~----Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN 274 (1265)
T KOG1920|consen 200 SISWRGDGEYFAVSFVESETGTRKIRVYDREG-A----LNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN 274 (1265)
T ss_pred eEEEccCCcEEEEEEEeccCCceeEEEecccc-h----hhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC
Confidence 35555555555441 234 7899998541 0 1111111122345788999998887765 56689999763
Q ss_pred ---CCceEEEecccccceeEEEEeCCCCEEEE---EeCCCcEEEEeC
Q 016769 338 ---KGSALAILKYHHATCNAVSFSSDCKLMAS---ASEDSTVALWEL 378 (383)
Q Consensus 338 ---~~~~~~~~~~h~~~v~~v~~spd~~~las---~s~d~~i~~w~~ 378 (383)
.++....+...+..|..++|+.++..||. ......|++|-+
T Consensus 275 GL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~ 321 (1265)
T KOG1920|consen 275 GLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTT 321 (1265)
T ss_pred CccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEe
Confidence 34433344444556999999999999987 666666999965
No 336
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=95.74 E-value=0.021 Score=56.25 Aligned_cols=70 Identities=13% Similarity=0.201 Sum_probs=63.5
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+++++|+|..-.++.|=.-|.+.+|...+.+.......|..+|.-+.|||+|..|.|+..=|.|.+|..+
T Consensus 62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred hhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 5679999998888888888999999999888887778899999999999999999999999999999864
No 337
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=95.70 E-value=0.0047 Score=58.72 Aligned_cols=136 Identities=18% Similarity=0.323 Sum_probs=82.2
Q ss_pred CCCcEEEEeCCCCC-Cceee--eec-cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEE
Q 016769 238 EDGSILVWDIRNPG-IPLTA--MKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGT 313 (383)
Q Consensus 238 ~dg~i~~wdl~~~~-~~~~~--~~~-h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~ 313 (383)
.|..+.|||+.+.- .|... +.. ..+....+++..+.+.+++|.....+.++|++-...++.. .....+.++
T Consensus 127 nds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~s-----vnTk~vqG~ 201 (783)
T KOG1008|consen 127 NDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSS-----VNTKYVQGI 201 (783)
T ss_pred ccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhh-----hhhhhcccc
Confidence 36679999997631 12111 111 2334456777766666788888889999988632211111 111235667
Q ss_pred EECC-CCcEEEEEeCCCcEEEEEc-CCC-ceEEEecccc----cceeEEEEeCCCC-EEEEEeCC-CcEEEEeCC
Q 016769 314 SIRP-DSKIAATAGWDRRVRIYNY-RKG-SALAILKYHH----ATCNAVSFSSDCK-LMASASED-STVALWELY 379 (383)
Q Consensus 314 ~~~p-~~~~l~s~~~dg~i~iwd~-~~~-~~~~~~~~h~----~~v~~v~~spd~~-~las~s~d-~~i~~w~~~ 379 (383)
.+.| .+.|+++. .||-|.+||. ..- +++.++...+ +.+..++|+|-.. .|++.++| ++|+++++.
T Consensus 202 tVdp~~~nY~cs~-~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 202 TVDPFSPNYFCSN-SDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred eecCCCCCceecc-ccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 8888 67787765 5999999994 222 2222222122 2489999999654 66776665 577888763
No 338
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=95.65 E-value=0.91 Score=42.48 Aligned_cols=148 Identities=14% Similarity=0.183 Sum_probs=80.0
Q ss_pred EEEEEeCCCcEEEEeCCCCCCcee-eeec------cccCeEEEEE-----eCCC---CceEEEEcCCcEEEEEccC-CCC
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLT-AMKV------HLEPVLCLSI-----DESC---NGGISGGADQKIVLYNLDH-STG 295 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~-~~~~------h~~~v~~~~~-----~~~~---~~~~s~~~d~~i~~wdl~~-~~~ 295 (383)
++++|+++|.+.|.|+|.+..... .+.. ....+.++.| ..++ ..++.|...|.+.+|.+.. ..+
T Consensus 99 Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g 178 (395)
T PF08596_consen 99 FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKILPSSNG 178 (395)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG
T ss_pred EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEEecCCCC
Confidence 478899999999999998654332 1112 2235667766 2222 2467888899999998863 333
Q ss_pred eeEEeee--eecCCCCeEEEE-EC------------------CC--CcEEEEEeCCCcEEEEEcCCCceEEEecccccce
Q 016769 296 SCVIKKE--INLERPGISGTS-IR------------------PD--SKIAATAGWDRRVRIYNYRKGSALAILKYHHATC 352 (383)
Q Consensus 296 ~~~~~~~--~~~~~~~i~~~~-~~------------------p~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v 352 (383)
....... ...+.+.+..+. |+ +. -+-++....+.-||++...+.+...........+
T Consensus 179 ~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~ 258 (395)
T PF08596_consen 179 RFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLC 258 (395)
T ss_dssp -EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-TT---EEEEE-SS-EEE
T ss_pred ceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEeCCCCcccceeecccccc
Confidence 3332221 112223333322 21 10 0123444568889999998877654332332334
Q ss_pred eEEEEe-----CCCCEEEEEeCCCcEEEEeCC
Q 016769 353 NAVSFS-----SDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 353 ~~v~~s-----pd~~~las~s~d~~i~~w~~~ 379 (383)
..+.+- ..+..|++-..||.|+++.+.
T Consensus 259 ~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP 290 (395)
T PF08596_consen 259 SSASVVPTISRNGGYCLVCLFNNGSIRIYSLP 290 (395)
T ss_dssp EEEEEEEEE-EEEEEEEEEEETTSEEEEEETT
T ss_pred ceEEEEeecccCCceEEEEEECCCcEEEEECC
Confidence 444552 356689999999999999884
No 339
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=95.50 E-value=0.0053 Score=58.36 Aligned_cols=143 Identities=15% Similarity=0.245 Sum_probs=87.3
Q ss_pred EEEEeCCCcEEEEeCCCCCCc-eeeeeccccCeEEEEEeCCCC-ceEEE----EcCCcEEEEEccCCCCeeEEeeeeec-
Q 016769 233 VLAGYEDGSILVWDIRNPGIP-LTAMKVHLEPVLCLSIDESCN-GGISG----GADQKIVLYNLDHSTGSCVIKKEINL- 305 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~-~~~~~~h~~~v~~~~~~~~~~-~~~s~----~~d~~i~~wdl~~~~~~~~~~~~~~~- 305 (383)
+..|..+|.|-+-.++.+..- -.....|..+.++++|.+... .++.| -.|-.+.|||+...-........+..
T Consensus 73 lavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~ 152 (783)
T KOG1008|consen 73 LAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSS 152 (783)
T ss_pred hhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccc
Confidence 445777888888877654322 223456778889999966533 34443 23566899999754111111111111
Q ss_pred CCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCc-eEEEecccccceeEEEEeC-CCCEEEEEeCCCcEEEEeC
Q 016769 306 ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS-ALAILKYHHATCNAVSFSS-DCKLMASASEDSTVALWEL 378 (383)
Q Consensus 306 ~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~v~~sp-d~~~las~s~d~~i~~w~~ 378 (383)
...+.+++++-.+.+.+.+|...+.++++|++... ....+ ..+.+..+...| .+.++++-+ |+.|-+||.
T Consensus 153 ~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~sv--nTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~ 224 (783)
T KOG1008|consen 153 TLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSV--NTKYVQGITVDPFSPNYFCSNS-DGDIAIWDT 224 (783)
T ss_pred cccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhh--hhhhcccceecCCCCCceeccc-cCceeeccc
Confidence 12345677777888999999999999999997321 11111 122344445666 556877666 999999994
No 340
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=95.20 E-value=0.65 Score=46.37 Aligned_cols=69 Identities=19% Similarity=0.269 Sum_probs=54.0
Q ss_pred eeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecC
Q 016769 22 TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (383)
Q Consensus 22 ~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~ 94 (383)
+++||||..-.|+.|=+-|.+-||.....+.-.....| ...+..+.|++ +|+.++|+..-|.+.+|.+.
T Consensus 63 tSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th--~a~i~~l~wS~--~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 63 TSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETH--PAPIQGLDWSH--DGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred hhhccChHHHHHhhccccceeEEEecCCceeeeeccCC--CCCceeEEecC--CCCeEEEcCCCceeEEEEee
Confidence 46899999989999999999999997554332221123 34678889998 47899999999999999986
No 341
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=95.14 E-value=1.6 Score=39.32 Aligned_cols=72 Identities=18% Similarity=0.242 Sum_probs=47.8
Q ss_pred CCeEEEEECCCCcEEEEEeC---------CCcEEEEEcC-CCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEE
Q 016769 308 PGISGTSIRPDSKIAATAGW---------DRRVRIYNYR-KGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALW 376 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~---------dg~i~iwd~~-~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w 376 (383)
...+...+.|+|.+.+..-. -..=.+|-++ .+.....+..|-..-+.++||||++ ++++=+..+.|.-|
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~ 190 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRY 190 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEE
Confidence 45677888999987664433 0111344444 4666666666666679999999997 45555666778777
Q ss_pred eCC
Q 016769 377 ELY 379 (383)
Q Consensus 377 ~~~ 379 (383)
++.
T Consensus 191 ~~d 193 (307)
T COG3386 191 DLD 193 (307)
T ss_pred ecC
Confidence 775
No 342
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=94.98 E-value=0.063 Score=48.49 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=66.2
Q ss_pred CCCCeeeeeecCCceeeEEEeCCCC-eEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccC
Q 016769 7 PPDPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 7 ~~~~~~~l~gH~~~V~~v~f~~~~~-~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
.-++.+-+.+|...|..|+|+|... +|..++.+..|+|-|+.+..++.....+ ..+.+.++.-+ ..+.+..|-..
T Consensus 182 ~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~---~~~wSC~wDld-e~h~IYaGl~n 257 (463)
T KOG1645|consen 182 DFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY---NQIWSCCWDLD-ERHVIYAGLQN 257 (463)
T ss_pred CcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc---CCceeeeeccC-CcceeEEeccC
Confidence 3344567789999999999999877 8999999999999999887666554333 34566666643 23566788899
Q ss_pred CeEEEeecCCCC
Q 016769 86 GTVKCWDIENGG 97 (383)
Q Consensus 86 ~ti~~Wd~~~~~ 97 (383)
|.|-++|+..++
T Consensus 258 G~VlvyD~R~~~ 269 (463)
T KOG1645|consen 258 GMVLVYDMRQPE 269 (463)
T ss_pred ceEEEEEccCCC
Confidence 999999997653
No 343
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.97 E-value=0.11 Score=52.70 Aligned_cols=98 Identities=13% Similarity=0.292 Sum_probs=67.0
Q ss_pred eEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEE
Q 016769 276 GISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAV 355 (383)
Q Consensus 276 ~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v 355 (383)
++.|+..|.+...|+...=+. +. .-+...+++++++|+.+|+.++.|-.+|-|.+||+..++.+..+.-|..+...+
T Consensus 102 ivi~Ts~ghvl~~d~~~nL~~--~~-~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~v 178 (1206)
T KOG2079|consen 102 IVIGTSHGHVLLSDMTGNLGP--LH-QNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGV 178 (1206)
T ss_pred EEEEcCchhhhhhhhhcccch--hh-cCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceE
Confidence 355666666766655321000 00 011234679999999999999999999999999999999888776666555444
Q ss_pred E---EeCCCCEEEEEeCCCcEEEEeC
Q 016769 356 S---FSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 356 ~---~spd~~~las~s~d~~i~~w~~ 378 (383)
- +..++..+.++...|. +|++
T Consensus 179 i~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 179 IFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred EEEEEeCCCcEEEEccCCCc--eEEE
Confidence 3 4456667888877775 7765
No 344
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=94.94 E-value=1 Score=40.61 Aligned_cols=109 Identities=19% Similarity=0.214 Sum_probs=71.5
Q ss_pred ccCeEEEEEeCCCCceEEEEc-CCcEEEEEccCCCCeeEE---eeeeecCCCCeEEEEECCCCcEEEEEeCCC-cEEEEE
Q 016769 261 LEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVI---KKEINLERPGISGTSIRPDSKIAATAGWDR-RVRIYN 335 (383)
Q Consensus 261 ~~~v~~~~~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~---~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg-~i~iwd 335 (383)
..--+.++|+++++.++.... .+.|..|+++..++...- ......+.+..-++++..+|.+-+++.++| .|.+|+
T Consensus 162 ~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~ 241 (307)
T COG3386 162 LTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFN 241 (307)
T ss_pred EEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEEC
Confidence 333457999999987766654 477888887632111100 011122334556778888888876777776 999999
Q ss_pred cCCCceEEEecccccceeEEEEe-CCCCEE-EEEeCC
Q 016769 336 YRKGSALAILKYHHATCNAVSFS-SDCKLM-ASASED 370 (383)
Q Consensus 336 ~~~~~~~~~~~~h~~~v~~v~~s-pd~~~l-as~s~d 370 (383)
.+ ++.+..+.-....+.+++|- |+.+.| +++...
T Consensus 242 pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~ 277 (307)
T COG3386 242 PD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITSARS 277 (307)
T ss_pred CC-CcEEEEEECCCCCCccceEeCCCcCEEEEEecCC
Confidence 98 99888887776778888994 666644 444443
No 345
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=94.93 E-value=0.084 Score=44.20 Aligned_cols=103 Identities=16% Similarity=0.163 Sum_probs=55.9
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEE-eCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCC-CC
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSI-DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER-PG 309 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~-~~ 309 (383)
-++.|+.+|.|.+|.....+........-.+++.++-. -.++....+++.|+.|+.|++........ ...+. ..
T Consensus 72 ~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~----~g~h~~~~ 147 (238)
T KOG2444|consen 72 KLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGY----VGQHNFES 147 (238)
T ss_pred eEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeee----eccccCCC
Confidence 37789999999999876432211111112334444433 22333557888999999998864321111 11111 12
Q ss_pred eEEEEECCCCcEEEEE--eCCCcEEEEEcCC
Q 016769 310 ISGTSIRPDSKIAATA--GWDRRVRIYNYRK 338 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~--~~dg~i~iwd~~~ 338 (383)
+..+.++..+++++.+ |.|..++.|++..
T Consensus 148 ~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 148 GEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred cceeEEecCCceEEeeccccchhhhhcchhh
Confidence 3333344455566666 6666666666644
No 346
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=94.73 E-value=2.2 Score=40.46 Aligned_cols=162 Identities=18% Similarity=0.236 Sum_probs=80.0
Q ss_pred ceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE--eCCCCCCceeeee
Q 016769 181 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW--DIRNPGIPLTAMK 258 (383)
Q Consensus 181 ~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w--dl~~~~~~~~~~~ 258 (383)
..+.++|+++++....+..+.....+.+++.++ ..+++...||...|| |+.... +..+.
T Consensus 218 ~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~-----------------~l~f~~~rdg~~~iy~~dl~~~~--~~~Lt 278 (425)
T COG0823 218 PRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGS-----------------KLAFSSSRDGSPDIYLMDLDGKN--LPRLT 278 (425)
T ss_pred ceEEEEeccCCccceeeccCCccCCccCCCCCC-----------------EEEEEECCCCCccEEEEcCCCCc--ceecc
Confidence 358899998877544443222222223333332 234455556665544 665433 22232
Q ss_pred ccccCeEEEEEeCCCCceE-EEEcCCcEEEE--EccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC-Cc--EE
Q 016769 259 VHLEPVLCLSIDESCNGGI-SGGADQKIVLY--NLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-RR--VR 332 (383)
Q Consensus 259 ~h~~~v~~~~~~~~~~~~~-s~~~d~~i~~w--dl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d-g~--i~ 332 (383)
.-...-..=+|+|++..++ +.+..|.-.|| +++..+. ..+. .....-..-.++|||++|+..+.. |. |.
T Consensus 279 ~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT----~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~ 353 (425)
T COG0823 279 NGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLT----FSGGGNSNPVWSPDGDKIVFESSSGGQWDID 353 (425)
T ss_pred cCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEee----ccCCCCcCccCCCCCCEEEEEeccCCceeeE
Confidence 2111122345688888764 44556665555 4443321 1111 111122255688999988877743 44 56
Q ss_pred EEEcCCCceEEEecccccceeEEEEeCCCCEEEEE
Q 016769 333 IYNYRKGSALAILKYHHATCNAVSFSSDCKLMASA 367 (383)
Q Consensus 333 iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~ 367 (383)
+.|+.++.....+ .+......-.|.|+++++...
T Consensus 354 ~~~~~~~~~~~~l-t~~~~~e~ps~~~ng~~i~~~ 387 (425)
T COG0823 354 KNDLASGGKIRIL-TSTYLNESPSWAPNGRMIMFS 387 (425)
T ss_pred EeccCCCCcEEEc-cccccCCCCCcCCCCceEEEe
Confidence 6666555533222 222223334567777755443
No 347
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=94.50 E-value=0.34 Score=47.11 Aligned_cols=104 Identities=10% Similarity=0.082 Sum_probs=70.4
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeec--cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee---eeecC
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKV--HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK---EINLE 306 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~---~~~~~ 306 (383)
.++.|+.-|.+.+|+-.. +.. ...+. -...+....+++.....+.|+..+.|.++-++... ...+.. .-+.+
T Consensus 47 ~l~~GsS~G~lyl~~R~~-~~~-~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~-p~~~~~~t~~d~~~ 123 (726)
T KOG3621|consen 47 YLAMGSSAGSVYLYNRHT-GEM-RKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKEL-PRDLDYVTPCDKSH 123 (726)
T ss_pred eEEEecccceEEEEecCc-hhh-hcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccC-CCcceeeccccccC
Confidence 467788899999998443 322 22222 22334445556655566778888999999887632 222211 11234
Q ss_pred CCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC
Q 016769 307 RPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 307 ~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~ 338 (383)
...|++++|++|++.+.+|...|+|..-.+++
T Consensus 124 ~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 124 KCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred CceEEEEEecccccEEeecCCCceEEEEEech
Confidence 56799999999999999999999999988876
No 348
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=94.42 E-value=2.7 Score=38.24 Aligned_cols=138 Identities=14% Similarity=0.214 Sum_probs=77.3
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeecccc--CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLE--PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
++.+ ..+.|.+|++........ ...+.. .+.++... ++.++.|...+.+.++.++........ .........+
T Consensus 101 lv~~-~g~~l~v~~l~~~~~l~~-~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~-va~d~~~~~v 175 (321)
T PF03178_consen 101 LVVA-VGNKLYVYDLDNSKTLLK-KAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLIL-VARDYQPRWV 175 (321)
T ss_dssp EEEE-ETTEEEEEEEETTSSEEE-EEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EEE-EEEESS-BEE
T ss_pred EEEe-ecCEEEEEEccCcccchh-hheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEEE-EEecCCCccE
Confidence 4433 468999999987552222 222222 44444443 457888888888988866543221211 1112223357
Q ss_pred EEEEECCCCcEEEEEeCCCcEEEEEcCC-------Cc-eEEEe-ccc-ccceeEE---EEeCC--CC------EEEEEeC
Q 016769 311 SGTSIRPDSKIAATAGWDRRVRIYNYRK-------GS-ALAIL-KYH-HATCNAV---SFSSD--CK------LMASASE 369 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~dg~i~iwd~~~-------~~-~~~~~-~~h-~~~v~~v---~~spd--~~------~las~s~ 369 (383)
.++.|-+++..++.+..+|.+.++.... +. .+... .-| ...|+++ .+.|. +. .++.++.
T Consensus 176 ~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~ 255 (321)
T PF03178_consen 176 TAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTV 255 (321)
T ss_dssp EEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEET
T ss_pred EEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEec
Confidence 7777775667899999999999998852 22 23222 223 3456666 44552 22 4888889
Q ss_pred CCcEEE
Q 016769 370 DSTVAL 375 (383)
Q Consensus 370 d~~i~~ 375 (383)
+|.|-.
T Consensus 256 ~G~Ig~ 261 (321)
T PF03178_consen 256 DGSIGV 261 (321)
T ss_dssp TS-EEE
T ss_pred CCEEEE
Confidence 998873
No 349
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.41 E-value=0.12 Score=52.61 Aligned_cols=72 Identities=25% Similarity=0.537 Sum_probs=49.9
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeCccccccccccccccc-ceeeeeeecCCCCcceeEecccCCeEEEeec
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA-HGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~ 93 (383)
.++|+++||+.+|+.|+.|=.+|.|.+||...++.+..+..+... .++..+.... +++.++++..-|. +|++
T Consensus 130 ~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~--~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 130 QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTS--QNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred CCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeC--CCcEEEEccCCCc--eEEE
Confidence 479999999999999999999999999999877766655444422 2333333322 2345666655554 6665
No 350
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=94.39 E-value=0.025 Score=56.11 Aligned_cols=69 Identities=19% Similarity=0.305 Sum_probs=51.0
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEE-----------EEeCCCCEEEEEeCCCcEEEEeC
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAV-----------SFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v-----------~~spd~~~las~s~d~~i~~w~~ 378 (383)
|.+.-|-++.-++-.+-.+++|++.++.+... ..+++|...+..+ ..||||..+|++..||.+++|.+
T Consensus 186 V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 186 VSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred eeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence 44444556667788888899999988866443 3455565544333 37999999999999999999988
Q ss_pred C
Q 016769 379 Y 379 (383)
Q Consensus 379 ~ 379 (383)
|
T Consensus 265 y 265 (1283)
T KOG1916|consen 265 Y 265 (1283)
T ss_pred e
Confidence 6
No 351
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.30 E-value=1.6 Score=44.23 Aligned_cols=74 Identities=15% Similarity=0.250 Sum_probs=54.1
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEcCC----------Cce-EE--Ee--------cccccceeEEEEeCC---CCE
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRK----------GSA-LA--IL--------KYHHATCNAVSFSSD---CKL 363 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~----------~~~-~~--~~--------~~h~~~v~~v~~spd---~~~ 363 (383)
..|..+.++|+|+++|..|..| |.|-.+.. ++. +. ++ ..+...|..+.|+|. +.+
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 4588899999999999988765 55666632 111 11 11 133457889999997 479
Q ss_pred EEEEeCCCcEEEEeCCCCC
Q 016769 364 MASASEDSTVALWELYPPH 382 (383)
Q Consensus 364 las~s~d~~i~~w~~~~~~ 382 (383)
|+.=..|+++|+||+.+|.
T Consensus 164 l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred EEEEecCCEEEEEecCCCC
Confidence 9999999999999998765
No 352
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=94.17 E-value=2.1 Score=40.13 Aligned_cols=75 Identities=11% Similarity=0.166 Sum_probs=52.8
Q ss_pred cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEE--ecc------cccceeEEEEe-----CCC---CEEEEEe
Q 016769 305 LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAI--LKY------HHATCNAVSFS-----SDC---KLMASAS 368 (383)
Q Consensus 305 ~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~------h~~~v~~v~~s-----pd~---~~las~s 368 (383)
...+.|++++.+ |-.++|.|..+|++.|.|++-+..+.. +.. ....+.++.|+ -|+ -.|..|.
T Consensus 84 ~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGT 162 (395)
T PF08596_consen 84 AKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGT 162 (395)
T ss_dssp --S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEE
T ss_pred ccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEe
Confidence 345778999997 556999999999999999977776653 222 22357788886 244 4788999
Q ss_pred CCCcEEEEeCCC
Q 016769 369 EDSTVALWELYP 380 (383)
Q Consensus 369 ~d~~i~~w~~~~ 380 (383)
..|.+.+|++-|
T Consensus 163 n~G~v~~fkIlp 174 (395)
T PF08596_consen 163 NSGNVLTFKILP 174 (395)
T ss_dssp TTSEEEEEEEEE
T ss_pred CCCCEEEEEEec
Confidence 999999999853
No 353
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=94.17 E-value=0.96 Score=42.98 Aligned_cols=56 Identities=14% Similarity=0.304 Sum_probs=37.1
Q ss_pred CcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 319 SKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 319 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
|..|+..+. +.|.+||+.+++.+..+. ..+|..|.||++|.++|-.+.| .+.+++.
T Consensus 117 G~LL~~~~~-~~i~~yDw~~~~~i~~i~--v~~vk~V~Ws~~g~~val~t~~-~i~il~~ 172 (443)
T PF04053_consen 117 GNLLGVKSS-DFICFYDWETGKLIRRID--VSAVKYVIWSDDGELVALVTKD-SIYILKY 172 (443)
T ss_dssp SSSEEEEET-TEEEEE-TTT--EEEEES--S-E-EEEEE-TTSSEEEEE-S--SEEEEEE
T ss_pred CcEEEEECC-CCEEEEEhhHcceeeEEe--cCCCcEEEEECCCCEEEEEeCC-eEEEEEe
Confidence 666666554 489999999999998886 2348899999999999998876 5666553
No 354
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=93.94 E-value=0.7 Score=43.68 Aligned_cols=121 Identities=14% Similarity=0.085 Sum_probs=65.8
Q ss_pred CcEEEEeCCCCCCce-eeeeccccCeEEEEEeCCCCce-EEEEcCCcEEEE--EccCCCCeeEEeeeeecCCCCeEEEEE
Q 016769 240 GSILVWDIRNPGIPL-TAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLY--NLDHSTGSCVIKKEINLERPGISGTSI 315 (383)
Q Consensus 240 g~i~~wdl~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~-~s~~~d~~i~~w--dl~~~~~~~~~~~~~~~~~~~i~~~~~ 315 (383)
..+.++|++++.... ..+.+ ....-.|+|++..+ ++...|+...+| |+...+.. .+....+.-..=.|
T Consensus 218 ~~i~~~~l~~g~~~~i~~~~g---~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~-----~Lt~~~gi~~~Ps~ 289 (425)
T COG0823 218 PRIYYLDLNTGKRPVILNFNG---NNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLP-----RLTNGFGINTSPSW 289 (425)
T ss_pred ceEEEEeccCCccceeeccCC---ccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcce-----ecccCCccccCccC
Confidence 468899998754432 22222 33345678888765 455667776555 55443311 11111111224568
Q ss_pred CCCCcEEEEEe-CCCcEEE--EEcCCCceE-EEecccccceeEEEEeCCCCEEEEEeCC
Q 016769 316 RPDSKIAATAG-WDRRVRI--YNYRKGSAL-AILKYHHATCNAVSFSSDCKLMASASED 370 (383)
Q Consensus 316 ~p~~~~l~s~~-~dg~i~i--wd~~~~~~~-~~~~~h~~~v~~v~~spd~~~las~s~d 370 (383)
+|||++++=.+ ..|.-.| .|++.+... .+..+-.. ..-.|||||++++..+..
T Consensus 290 spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~--~~p~~SpdG~~i~~~~~~ 346 (425)
T COG0823 290 SPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGN--SNPVWSPDGDKIVFESSS 346 (425)
T ss_pred CCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCC--cCccCCCCCCEEEEEecc
Confidence 99998765544 4554444 455544332 22222222 245689999988877743
No 355
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=93.93 E-value=4.4 Score=36.15 Aligned_cols=141 Identities=17% Similarity=0.218 Sum_probs=82.6
Q ss_pred eCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc-------CCcEEEEEcc----------CCCCeeEE
Q 016769 237 YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-------DQKIVLYNLD----------HSTGSCVI 299 (383)
Q Consensus 237 ~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~-------d~~i~~wdl~----------~~~~~~~~ 299 (383)
...|.|-|||.+..-..+..+..|.----.+.+.+++..|+.+.. .|+.++ |++ ..++..+.
T Consensus 74 ~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kL-Nl~tM~psL~~ld~~sG~ll~ 152 (305)
T PF07433_consen 74 TGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKL-NLDTMQPSLVYLDARSGALLE 152 (305)
T ss_pred CCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceec-ChhhcCCceEEEecCCCceee
Confidence 447889999988433334444444332234556777766665421 133333 222 22333322
Q ss_pred eeee--ecCCCCeEEEEECCCCcEEEEEeCCCc-------EEEEEcCCCceEEE-------ecccccceeEEEEeCCCCE
Q 016769 300 KKEI--NLERPGISGTSIRPDSKIAATAGWDRR-------VRIYNYRKGSALAI-------LKYHHATCNAVSFSSDCKL 363 (383)
Q Consensus 300 ~~~~--~~~~~~i~~~~~~p~~~~l~s~~~dg~-------i~iwd~~~~~~~~~-------~~~h~~~v~~v~~spd~~~ 363 (383)
+..+ ..+.-++.-+++.++|..+...-+.|. +.+++.. +.+.. +..-...+-+|++++++..
T Consensus 153 q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g--~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ 230 (305)
T PF07433_consen 153 QVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRG--GALRLLPAPEEQWRRLNGYIGSIAADRDGRL 230 (305)
T ss_pred eeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCC--CcceeccCChHHHHhhCCceEEEEEeCCCCE
Confidence 2223 334557889999999887776666653 2233332 21221 2234578999999999985
Q ss_pred E-EEEeCCCcEEEEeCCC
Q 016769 364 M-ASASEDSTVALWELYP 380 (383)
Q Consensus 364 l-as~s~d~~i~~w~~~~ 380 (383)
+ +|+=..+++.+||...
T Consensus 231 ia~tsPrGg~~~~~d~~t 248 (305)
T PF07433_consen 231 IAVTSPRGGRVAVWDAAT 248 (305)
T ss_pred EEEECCCCCEEEEEECCC
Confidence 5 6777888999998754
No 356
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=93.32 E-value=0.12 Score=51.63 Aligned_cols=74 Identities=20% Similarity=0.260 Sum_probs=61.7
Q ss_pred CCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEE-eCCC-cEEEEeCC
Q 016769 306 ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASA-SEDS-TVALWELY 379 (383)
Q Consensus 306 ~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~-s~d~-~i~~w~~~ 379 (383)
+....++++|+-+.+.++.|+-.|.|++|++.+|.......+|..+|.-+.=+-||.++.+. +... -..+|++.
T Consensus 1100 ~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~ 1175 (1516)
T KOG1832|consen 1100 ETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDAS 1175 (1516)
T ss_pred cccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccc
Confidence 34568899999999999999999999999999999999999999999999888899865543 3333 46778774
No 357
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=93.06 E-value=5.9 Score=34.91 Aligned_cols=140 Identities=19% Similarity=0.271 Sum_probs=79.6
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEe-----e-----
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIK-----K----- 301 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~-----~----- 301 (383)
+++.|+++| |.++++.......... +..+|..+.+-+..+.++.- .|+.+.+++++......... +
T Consensus 9 ~L~vGt~~G-l~~~~~~~~~~~~~i~--~~~~I~ql~vl~~~~~llvL-sd~~l~~~~L~~l~~~~~~~~~~~~~~~~~~ 84 (275)
T PF00780_consen 9 RLLVGTEDG-LYVYDLSDPSKPTRIL--KLSSITQLSVLPELNLLLVL-SDGQLYVYDLDSLEPVSTSAPLAFPKSRSLP 84 (275)
T ss_pred EEEEEECCC-EEEEEecCCccceeEe--ecceEEEEEEecccCEEEEE-cCCccEEEEchhhcccccccccccccccccc
Confidence 578899998 9999984333332222 23348888887766654433 46999999986533211000 0
Q ss_pred eeecCCCCeEEEE--ECCCCcEEEEEeCCCcEEEEEcCCC-----ceEEEecccccceeEEEEeCCCCEEEEEeCCCcEE
Q 016769 302 EINLERPGISGTS--IRPDSKIAATAGWDRRVRIYNYRKG-----SALAILKYHHATCNAVSFSSDCKLMASASEDSTVA 374 (383)
Q Consensus 302 ~~~~~~~~i~~~~--~~p~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~ 374 (383)
.......++..++ -...+...++....++|.+|..... +..+.+. -...+.+++|. ++.++.|..++ ..
T Consensus 85 ~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~~~-f~ 160 (275)
T PF00780_consen 85 TKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTSKG-FY 160 (275)
T ss_pred ccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeCCc-eE
Confidence 0011122344444 1233333344455669999988653 2334432 45678889998 45677776555 45
Q ss_pred EEeCC
Q 016769 375 LWELY 379 (383)
Q Consensus 375 ~w~~~ 379 (383)
+.|+.
T Consensus 161 ~idl~ 165 (275)
T PF00780_consen 161 LIDLN 165 (275)
T ss_pred EEecC
Confidence 55554
No 358
>PRK13616 lipoprotein LpqB; Provisional
Probab=92.62 E-value=2.7 Score=41.61 Aligned_cols=105 Identities=10% Similarity=-0.039 Sum_probs=57.8
Q ss_pred cCeEEEEEeCCCCceEEEE------cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC-------
Q 016769 262 EPVLCLSIDESCNGGISGG------ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD------- 328 (383)
Q Consensus 262 ~~v~~~~~~~~~~~~~s~~------~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d------- 328 (383)
..+....+++++..++... .|..-.||=......... +. .....+.-.|+|||+.++.....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~----lt-~g~~~t~PsWspDG~~lw~v~dg~~~~~v~ 424 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQ----VL-EGHSLTRPSWSLDADAVWVVVDGNTVVRVI 424 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCccee----ee-cCCCCCCceECCCCCceEEEecCcceEEEe
Confidence 3566778888887664433 244444453321111111 11 11236677899998877766533
Q ss_pred -----CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEE
Q 016769 329 -----RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVAL 375 (383)
Q Consensus 329 -----g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~ 375 (383)
+.+.+.+++.+.... ...+.|..++|||||+.+|... ++.|.+
T Consensus 425 ~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 425 RDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred ccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 122222333222211 2345799999999999887765 455555
No 359
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.42 E-value=4.6 Score=38.45 Aligned_cols=98 Identities=19% Similarity=0.211 Sum_probs=64.2
Q ss_pred EEEEeCCCcEEEEeCCCCCC-ceeeeeccc----cCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCC
Q 016769 233 VLAGYEDGSILVWDIRNPGI-PLTAMKVHL----EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 307 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~-~~~~~~~h~----~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~ 307 (383)
.+.|-.|..|.-||+|-.+. .+...+.|. ....|.+-..+| +++.||.+|.|++||--.. . .+..+..-.
T Consensus 397 TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~---~-AKTAlPgLG 471 (644)
T KOG2395|consen 397 TLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGR---R-AKTALPGLG 471 (644)
T ss_pred cEEeecCCceEEecccccCcceeeeeeccccccccccceeeecCCc-eEEEeecCCcEEeehhhhh---h-hhhcccccC
Confidence 45688899999999985443 233334442 123444433333 5788999999999974211 1 122334455
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEc
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNY 336 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~ 336 (383)
..|..+..+.||+.|++.+ +.++.+-++
T Consensus 472 ~~I~hVdvtadGKwil~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 472 DAIKHVDVTADGKWILATC-KTYLLLIDT 499 (644)
T ss_pred CceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence 6799999999999988665 667777776
No 360
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=92.10 E-value=7.5 Score=33.82 Aligned_cols=135 Identities=16% Similarity=0.196 Sum_probs=71.2
Q ss_pred EEEEEeCCCcEEEEeCCCCCCc--ee---eee-----ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccC--CCCeeEE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIP--LT---AMK-----VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH--STGSCVI 299 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~--~~---~~~-----~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~--~~~~~~~ 299 (383)
.+++.-.++.+.++++...... .. .++ .++..+..+++|+..+.++.+-......+|.++. .......
T Consensus 78 ~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~ 157 (248)
T PF06977_consen 78 YVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFV 157 (248)
T ss_dssp EEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EE
T ss_pred EEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceee
Confidence 4555545888988988432211 11 111 2334578999999988888776666677777754 1111111
Q ss_pred eee-----eecCCCCeEEEEECCCC-cEEEEEeCCCcEEEEEcCCCceEEEec--c--c-----ccceeEEEEeCCCCEE
Q 016769 300 KKE-----INLERPGISGTSIRPDS-KIAATAGWDRRVRIYNYRKGSALAILK--Y--H-----HATCNAVSFSSDCKLM 364 (383)
Q Consensus 300 ~~~-----~~~~~~~i~~~~~~p~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~--~--h-----~~~v~~v~~spd~~~l 364 (383)
... .......+++++++|.. .+++.....+.|..+| .+|+.+..+. . | -...-.|+|.|+|++.
T Consensus 158 ~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LY 236 (248)
T PF06977_consen 158 SDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLY 236 (248)
T ss_dssp EE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EE
T ss_pred ccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEE
Confidence 111 11223457889999864 5777778888999999 5677665442 1 1 1356788999999866
Q ss_pred EEE
Q 016769 365 ASA 367 (383)
Q Consensus 365 as~ 367 (383)
++.
T Consensus 237 Ivs 239 (248)
T PF06977_consen 237 IVS 239 (248)
T ss_dssp EEE
T ss_pred EEc
Confidence 654
No 361
>PRK02888 nitrous-oxide reductase; Validated
Probab=92.07 E-value=13 Score=36.65 Aligned_cols=98 Identities=13% Similarity=0.055 Sum_probs=62.9
Q ss_pred CCcEEEEeCCC----CCCceeeeeccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCe--------eEEeeeeec
Q 016769 239 DGSILVWDIRN----PGIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGS--------CVIKKEINL 305 (383)
Q Consensus 239 dg~i~~wdl~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~--------~~~~~~~~~ 305 (383)
++.|.+.|.++ ....+..+... .....+.++|++++++.++ .++++.+.|+...... ..+..+.+.
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIPVG-KsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev 373 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVPVP-KNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL 373 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEECC-CCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc
Confidence 56788888776 22223333222 2345788999999876554 5899999998753210 011122222
Q ss_pred CCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC
Q 016769 306 ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 306 ~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~ 338 (383)
.-+....+|.++|+...+---|..|..||+.+
T Consensus 374 -GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 374 -GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred -CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 12345678999998888888899999999975
No 362
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=91.43 E-value=2.1 Score=40.44 Aligned_cols=70 Identities=26% Similarity=0.264 Sum_probs=47.2
Q ss_pred eEEEEECCCCcEEEEE-eCCC----cEEEEEcCCCceEEEecccccce-eEEEEeCCCCEEEEEeCCC-----------c
Q 016769 310 ISGTSIRPDSKIAATA-GWDR----RVRIYNYRKGSALAILKYHHATC-NAVSFSSDCKLMASASEDS-----------T 372 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~-~~dg----~i~iwd~~~~~~~~~~~~h~~~v-~~v~~spd~~~las~s~d~-----------~ 372 (383)
+..+.++||++++|-+ +..| .++++|+.+++.+... ....- ..+.|.+|++.|.....|. .
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~--i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDG--IENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEE--EEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCc--ccccccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 3467789999987755 3444 5999999999876422 11222 2389999999877776554 3
Q ss_pred EEEEeCCCC
Q 016769 373 VALWELYPP 381 (383)
Q Consensus 373 i~~w~~~~~ 381 (383)
|+.|++..+
T Consensus 204 v~~~~~gt~ 212 (414)
T PF02897_consen 204 VYRHKLGTP 212 (414)
T ss_dssp EEEEETTS-
T ss_pred EEEEECCCC
Confidence 777877643
No 363
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=91.34 E-value=10 Score=35.52 Aligned_cols=101 Identities=25% Similarity=0.342 Sum_probs=50.5
Q ss_pred eCCCcEEEEeCCCCCCceeeeecccc--CeEEEEE--eCCCCceEEEEc-CCcEEEEEccCCCCeeEEeeeeecC-----
Q 016769 237 YEDGSILVWDIRNPGIPLTAMKVHLE--PVLCLSI--DESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINLE----- 306 (383)
Q Consensus 237 ~~dg~i~~wdl~~~~~~~~~~~~h~~--~v~~~~~--~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~~~~~~~~----- 306 (383)
-...++.+||+.+ ...++++....+ ...-+.| +|.....++++. ...|-+|--+ ..+....++.+...
T Consensus 219 ~yG~~l~vWD~~~-r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~-~~g~W~a~kVi~ip~~~v~ 296 (461)
T PF05694_consen 219 KYGHSLHVWDWST-RKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKD-DDGEWAAEKVIDIPAKKVE 296 (461)
T ss_dssp -S--EEEEEETTT-TEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE--ETTEEEEEEEEEE--EE--
T ss_pred cccCeEEEEECCC-CcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEc-CCCCeeeeEEEECCCcccC
Confidence 3467899999987 455666654322 2344555 666665555443 4445444332 12333333221110
Q ss_pred --------------CCCeEEEEECCCCcEEEEEeC-CCcEEEEEcCCC
Q 016769 307 --------------RPGISGTSIRPDSKIAATAGW-DRRVRIYNYRKG 339 (383)
Q Consensus 307 --------------~~~i~~~~~~p~~~~l~s~~~-dg~i~iwd~~~~ 339 (383)
..-++.+.+|.|.++|...++ +|.||-||+...
T Consensus 297 ~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP 344 (461)
T PF05694_consen 297 GWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDP 344 (461)
T ss_dssp SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SST
T ss_pred cccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCC
Confidence 123688999999999888885 899999999764
No 364
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=91.31 E-value=1.7 Score=37.04 Aligned_cols=64 Identities=13% Similarity=0.137 Sum_probs=48.2
Q ss_pred ECCCCcEEEEEeCCCcEEEEEcCCCceEEE-------ec-------ccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 315 IRPDSKIAATAGWDRRVRIYNYRKGSALAI-------LK-------YHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 315 ~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~-------~~-------~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+..+++++++-+.+|.+++||+.+++.+.. +. .....|..+.++.+|.-+++-+ +|..+.|+..
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~ 95 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPD 95 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccc
Confidence 445778999999999999999988765421 11 2445788888998888777765 4678888764
No 365
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=91.30 E-value=5.3 Score=41.81 Aligned_cols=67 Identities=16% Similarity=0.118 Sum_probs=48.8
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEE
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIY 334 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iw 334 (383)
.|.++.|..+.+.+..+..+|.|.+-|..... ......-..+|.+++++||.+.++..+.++++.+-
T Consensus 70 ~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~-----~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~m 136 (1265)
T KOG1920|consen 70 EIVSVQFLADTNSICVITALGDIILVDPETLE-----LEIVGNVDNGISAASWSPDEELLALITGRQTLLFM 136 (1265)
T ss_pred ceEEEEEecccceEEEEecCCcEEEEcccccc-----eeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEE
Confidence 56667776666667777788888887654321 22334456789999999999999999998888764
No 366
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.11 E-value=4.5 Score=38.49 Aligned_cols=75 Identities=11% Similarity=0.142 Sum_probs=52.8
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEc---------CCCceEEEe-----------cccccceeEEEEeCCC---CEEE
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNY---------RKGSALAIL-----------KYHHATCNAVSFSSDC---KLMA 365 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~---------~~~~~~~~~-----------~~h~~~v~~v~~spd~---~~la 365 (383)
.|..+..+|.|..++-.|.+|-+.++-. ++++...+. +.-.-.+..++|+|+. .+|.
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~ 184 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV 184 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence 3667788999999999999997665431 234332111 1122246778899986 5888
Q ss_pred EEeCCCcEEEEeCCCCCC
Q 016769 366 SASEDSTVALWELYPPHA 383 (383)
Q Consensus 366 s~s~d~~i~~w~~~~~~~ 383 (383)
.-+.|++||+||++.|++
T Consensus 185 iL~sdnviRiy~lS~~te 202 (741)
T KOG4460|consen 185 LLTSDNVIRIYSLSEPTE 202 (741)
T ss_pred EEecCcEEEEEecCCcch
Confidence 889999999999987763
No 367
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=90.48 E-value=13 Score=33.69 Aligned_cols=179 Identities=13% Similarity=0.162 Sum_probs=99.2
Q ss_pred ceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeee--
Q 016769 181 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK-- 258 (383)
Q Consensus 181 ~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~-- 258 (383)
..|.+-|++.++.+..+.-+ + |..+.+ .... .+.+-+.||++.-..+...+.......
T Consensus 118 ~SVtVVDl~~~kvv~ei~~P-----------G---C~~iyP---~~~~---~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~ 177 (342)
T PF06433_consen 118 TSVTVVDLAAKKVVGEIDTP-----------G---CWLIYP---SGNR---GFSMLCGDGSLLTVTLDADGKEAQKSTKV 177 (342)
T ss_dssp EEEEEEETTTTEEEEEEEGT-----------S---EEEEEE---EETT---EEEEEETTSCEEEEEETSTSSEEEEEEEE
T ss_pred CeEEEEECCCCceeeeecCC-----------C---EEEEEe---cCCC---ceEEEecCCceEEEEECCCCCEeEeeccc
Confidence 46888888888776655421 1 222222 2111 245667799999998876554322211
Q ss_pred --ccccCeEE-EEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee--------cCCCCeEEEEECCC-CcEEEEEe
Q 016769 259 --VHLEPVLC-LSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN--------LERPGISGTSIRPD-SKIAATAG 326 (383)
Q Consensus 259 --~h~~~v~~-~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~--------~~~~~i~~~~~~p~-~~~l~s~~ 326 (383)
...+++.. -.+...+..++--+..|.|+--|+....-.......+. ...++-.-+++++. +++++...
T Consensus 178 F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh 257 (342)
T PF06433_consen 178 FDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMH 257 (342)
T ss_dssp SSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEE
T ss_pred cCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEec
Confidence 11223321 12233333444457788888777765432222111110 00122334777754 44443332
Q ss_pred C--CC-------cEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEE-eCCCcEEEEeCCC
Q 016769 327 W--DR-------RVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASA-SEDSTVALWELYP 380 (383)
Q Consensus 327 ~--dg-------~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~-s~d~~i~~w~~~~ 380 (383)
. ++ .|-++|+.+++.+.++.. +.++.+|+.+.|.+ +|.+. ..++.+.+||...
T Consensus 258 ~g~~gsHKdpgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~t 321 (342)
T PF06433_consen 258 QGGEGSHKDPGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAAT 321 (342)
T ss_dssp E--TT-TTS-EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT
T ss_pred CCCCCCccCCceEEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcC
Confidence 2 11 577789999999988863 34688999998877 66554 4579999999853
No 368
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=90.20 E-value=0.61 Score=43.10 Aligned_cols=89 Identities=18% Similarity=0.217 Sum_probs=52.0
Q ss_pred CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEE-Eecc------------c-
Q 016769 283 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA-ILKY------------H- 348 (383)
Q Consensus 283 ~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~------------h- 348 (383)
+.+.++|++...... +......+....++|+|+.+|-. .++.|.++++.++.... +..+ +
T Consensus 23 ~~y~i~d~~~~~~~~-----l~~~~~~~~~~~~sP~g~~~~~v-~~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvye 96 (353)
T PF00930_consen 23 GDYYIYDIETGEITP-----LTPPPPKLQDAKWSPDGKYIAFV-RDNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYE 96 (353)
T ss_dssp EEEEEEETTTTEEEE-----SS-EETTBSEEEE-SSSTEEEEE-ETTEEEEESSTTSEEEESES--TTTEEESB--HHHH
T ss_pred eeEEEEecCCCceEE-----CcCCccccccceeecCCCeeEEE-ecCceEEEECCCCCeEEeccccceeEEcCccceecc
Confidence 347788887643211 11113457788999999998865 47889999987764432 2222 0
Q ss_pred ---ccceeEEEEeCCCCEEEEEeCC-CcEEEEe
Q 016769 349 ---HATCNAVSFSSDCKLMASASED-STVALWE 377 (383)
Q Consensus 349 ---~~~v~~v~~spd~~~las~s~d-~~i~~w~ 377 (383)
-+.-..+-||||+++||....| ..|+.+.
T Consensus 97 EEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~ 129 (353)
T PF00930_consen 97 EEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYP 129 (353)
T ss_dssp HHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEE
T ss_pred ccccccccceEECCCCCEEEEEEECCcCCceEE
Confidence 1122567799999988875544 4444443
No 369
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=90.05 E-value=6 Score=33.70 Aligned_cols=60 Identities=13% Similarity=0.179 Sum_probs=45.6
Q ss_pred EEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCC--CEEEEEeCC
Q 016769 311 SGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDC--KLMASASED 370 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~--~~las~s~d 370 (383)
-++++..+|+..++.-..++|..+|..+|+.+..++--...|.|++|--.+ -+.+|+.++
T Consensus 215 DGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgGkn~d~~yvT~aa~ 276 (310)
T KOG4499|consen 215 DGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGGKNLDILYVTTAAK 276 (310)
T ss_pred CcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecCCCccEEEEEehhc
Confidence 345666688888888888999999999999999888778899999996331 244555443
No 370
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.71 E-value=6.5 Score=34.02 Aligned_cols=61 Identities=11% Similarity=0.067 Sum_probs=46.8
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCceEEEeccccccee-EEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN-AVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
-|.+++.|+..|.+++.+..+|.++..+..-. .|. .....+++..+-.|+.|++.+.-|.+
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~-~vk~~a~~d~~~glIycgshd~~~yalD~~ 123 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILE-TVKVRAQCDFDGGLIYCGSHDGNFYALDPK 123 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeehh-hhccceEEcCCCceEEEecCCCcEEEeccc
Confidence 45679999999999999999998887664322 232 22356789999999999998877654
No 371
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=89.22 E-value=2.4 Score=39.77 Aligned_cols=71 Identities=15% Similarity=0.270 Sum_probs=53.0
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccc-eeEEEE-eCCC----------------C-EEEEEeC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT-CNAVSF-SSDC----------------K-LMASASE 369 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~v~~-spd~----------------~-~las~s~ 369 (383)
.+.++.++|++++.|+...=|+|.++|+.++..+..++|..+. +.-+.. .+.. . +++-+-.
T Consensus 309 ~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyapr 388 (415)
T PF14655_consen 309 EGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPR 388 (415)
T ss_pred eEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEecc
Confidence 3678999999999999999999999999999988888887653 221111 1111 1 3456888
Q ss_pred CCcEEEEeCC
Q 016769 370 DSTVALWELY 379 (383)
Q Consensus 370 d~~i~~w~~~ 379 (383)
-|.|.||.+.
T Consensus 389 Rg~lEvW~~~ 398 (415)
T PF14655_consen 389 RGILEVWSMR 398 (415)
T ss_pred CCeEEEEecC
Confidence 9999999984
No 372
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=88.92 E-value=1.2 Score=41.13 Aligned_cols=50 Identities=22% Similarity=0.269 Sum_probs=36.7
Q ss_pred CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+.+.++|+.+++... +......+....|||||+.+|... ++.|.++++.
T Consensus 22 ~~~y~i~d~~~~~~~~-l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~ 71 (353)
T PF00930_consen 22 KGDYYIYDIETGEITP-LTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLA 71 (353)
T ss_dssp EEEEEEEETTTTEEEE-SS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESST
T ss_pred ceeEEEEecCCCceEE-CcCCccccccceeecCCCeeEEEe-cCceEEEECC
Confidence 4578899999876543 332356788899999999999886 5678888763
No 373
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=88.63 E-value=4.8 Score=37.86 Aligned_cols=91 Identities=13% Similarity=0.109 Sum_probs=55.5
Q ss_pred CCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCC-----------
Q 016769 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG----------- 75 (383)
Q Consensus 7 ~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 75 (383)
|......|......+.+|+.+|.+++.|..-.=|+|.|+|+.++..+...++-..+.............
T Consensus 296 ~l~~r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~ 375 (415)
T PF14655_consen 296 PLPMRFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSS 375 (415)
T ss_pred ccceEEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCC
Confidence 334455677888889999999999887776555999999998766554433322221111111111000
Q ss_pred --ccee--EecccCCeEEEeecCCCC
Q 016769 76 --LNKV--ISQGRDGTVKCWDIENGG 97 (383)
Q Consensus 76 --~~~l--~s~~~D~ti~~Wd~~~~~ 97 (383)
...+ +=+-..|.|-+|.+.+|.
T Consensus 376 ~~~~l~LvIyaprRg~lEvW~~~~g~ 401 (415)
T PF14655_consen 376 SRFALFLVIYAPRRGILEVWSMRQGP 401 (415)
T ss_pred CcceEEEEEEeccCCeEEEEecCCCC
Confidence 0112 236677899999998763
No 374
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=88.32 E-value=21 Score=33.06 Aligned_cols=72 Identities=22% Similarity=0.261 Sum_probs=37.2
Q ss_pred eEEEEECCCCcEEEEEeCCC----------------cEEEEEcCCCceEE---------Eeccccc-ceeEEEEeCCCCE
Q 016769 310 ISGTSIRPDSKIAATAGWDR----------------RVRIYNYRKGSALA---------ILKYHHA-TCNAVSFSSDCKL 363 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg----------------~i~iwd~~~~~~~~---------~~~~h~~-~v~~v~~spd~~~ 363 (383)
..-+-.++|+++++-=+.|. .|+++++..++... .+.+|.. .=-...|||||++
T Consensus 285 ~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~ 364 (386)
T PF14583_consen 285 CSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKW 364 (386)
T ss_dssp EEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSE
T ss_pred eeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCE
Confidence 45566789999876544442 56678887765432 1111111 1133579999995
Q ss_pred -EEEEeCCCcEEEEeCCCC
Q 016769 364 -MASASEDSTVALWELYPP 381 (383)
Q Consensus 364 -las~s~d~~i~~w~~~~~ 381 (383)
|.++...|...||-+.-|
T Consensus 365 VlF~Sd~~G~~~vY~v~i~ 383 (386)
T PF14583_consen 365 VLFRSDMEGPPAVYLVEIP 383 (386)
T ss_dssp EEEEE-TTSS-EEEEEE--
T ss_pred EEEECCCCCCccEEEEeCc
Confidence 556777888888765444
No 375
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=88.03 E-value=1.6 Score=26.20 Aligned_cols=31 Identities=23% Similarity=0.219 Sum_probs=24.5
Q ss_pred CceeeEEEeCCC---CeEEEecCCCeEEEeeCcc
Q 016769 19 ASVTDVCFHQTK---PILFAGTTGGELRIWDTVQ 49 (383)
Q Consensus 19 ~~V~~v~f~~~~---~~L~sgs~D~~v~vW~~~~ 49 (383)
+.|+++.|+|+. ++|+-.-.-+.|-|+|+.+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 578999999854 4777766668999999864
No 376
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=88.03 E-value=7.8 Score=36.33 Aligned_cols=99 Identities=10% Similarity=0.140 Sum_probs=46.9
Q ss_pred cCCcEEEEEccCCCCeeEEeeeeecCCC--CeEEEEEC--CCCcE-EEEEeCCCcEEEEEc-CCCc----eEEEeccc--
Q 016769 281 ADQKIVLYNLDHSTGSCVIKKEINLERP--GISGTSIR--PDSKI-AATAGWDRRVRIYNY-RKGS----ALAILKYH-- 348 (383)
Q Consensus 281 ~d~~i~~wdl~~~~~~~~~~~~~~~~~~--~i~~~~~~--p~~~~-l~s~~~dg~i~iwd~-~~~~----~~~~~~~h-- 348 (383)
..+++.+||+.... .. +.+..... -.-.+.|- |+..+ ++.+-...+|..|-- +.++ .+..+..-
T Consensus 220 yG~~l~vWD~~~r~--~~--Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v 295 (461)
T PF05694_consen 220 YGHSLHVWDWSTRK--LL--QTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKV 295 (461)
T ss_dssp S--EEEEEETTTTE--EE--EEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE-
T ss_pred ccCeEEEEECCCCc--Ee--eEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCccc
Confidence 45779999997543 22 22332222 23456664 44433 332334555555544 3331 12222110
Q ss_pred ---------------ccceeEEEEeCCCCE-EEEEeCCCcEEEEeCCCCCC
Q 016769 349 ---------------HATCNAVSFSSDCKL-MASASEDSTVALWELYPPHA 383 (383)
Q Consensus 349 ---------------~~~v~~v~~spd~~~-las~s~d~~i~~w~~~~~~~ 383 (383)
..-|..|.+|.|.++ .++.-.+|.|+-||++||++
T Consensus 296 ~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~ 346 (461)
T PF05694_consen 296 EGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFN 346 (461)
T ss_dssp -SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS
T ss_pred CcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCC
Confidence 234788999999995 57888999999999999874
No 377
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=87.97 E-value=3 Score=24.20 Aligned_cols=29 Identities=14% Similarity=0.236 Sum_probs=18.6
Q ss_pred cccceeEEEEeCCCCEEEEEe-CC--CcEEEE
Q 016769 348 HHATCNAVSFSSDCKLMASAS-ED--STVALW 376 (383)
Q Consensus 348 h~~~v~~v~~spd~~~las~s-~d--~~i~~w 376 (383)
....-...+|||||++|+..+ .+ |.-.||
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 444566778999999776544 44 555555
No 378
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=87.94 E-value=23 Score=33.07 Aligned_cols=138 Identities=13% Similarity=0.163 Sum_probs=80.1
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc---CCcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA---DQKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~---d~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
.+....++.|.+.|...... +....... ....+.+++++..+..+.. ++++.+.| ..+...... ......
T Consensus 89 yv~~~~~~~v~vid~~~~~~-~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid--~~t~~~~~~--~~vG~~- 161 (381)
T COG3391 89 YVTTGDSNTVSVIDTATNTV-LGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVID--AATNKVTAT--IPVGNT- 161 (381)
T ss_pred EEecCCCCeEEEEcCcccce-eeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEe--CCCCeEEEE--EecCCC-
Confidence 34455578899999765432 23222222 4456788888877665544 45555554 334433332 222222
Q ss_pred eEEEEECCCCcEEEEE-eCCCcEEEEEcCCCceEE-E----ecccccceeEEEEeCCCCEEE-EEeCC--CcEEEEeC
Q 016769 310 ISGTSIRPDSKIAATA-GWDRRVRIYNYRKGSALA-I----LKYHHATCNAVSFSSDCKLMA-SASED--STVALWEL 378 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~-~~dg~i~iwd~~~~~~~~-~----~~~h~~~v~~v~~spd~~~la-s~s~d--~~i~~w~~ 378 (383)
-..++++|+++.+..+ ..+++|.++|........ . .. -......++++|||+++- +-..+ +.+...|.
T Consensus 162 P~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~-~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~ 238 (381)
T COG3391 162 PTGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVG-VGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDT 238 (381)
T ss_pred cceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccc-cCCCCceEEECCCCCEEEEEeccCCCceEEEEeC
Confidence 2789999999955444 479999999976554442 1 21 122346678999998443 32222 46666655
No 379
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=87.73 E-value=23 Score=35.31 Aligned_cols=92 Identities=13% Similarity=0.284 Sum_probs=58.6
Q ss_pred cCCcEEEEEccCCCCeeEEeeeee-cCCCCeEEEEE--CCCCcEEEEEeCCCcEEEEEcCC------C---ceEEE--ec
Q 016769 281 ADQKIVLYNLDHSTGSCVIKKEIN-LERPGISGTSI--RPDSKIAATAGWDRRVRIYNYRK------G---SALAI--LK 346 (383)
Q Consensus 281 ~d~~i~~wdl~~~~~~~~~~~~~~-~~~~~i~~~~~--~p~~~~l~s~~~dg~i~iwd~~~------~---~~~~~--~~ 346 (383)
....+.|||.+... +..+.. ...+.|..+.| .|+++.+++-|....|.++--.. + .++.. +.
T Consensus 49 ~~~~LtIWD~~~~~----lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~ 124 (631)
T PF12234_consen 49 SRSELTIWDTRSGV----LEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDIS 124 (631)
T ss_pred CCCEEEEEEcCCcE----EEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEee
Confidence 34458899986432 222222 23456777776 58999999999999999985421 1 12222 23
Q ss_pred ccc-cceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 347 YHH-ATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 347 ~h~-~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.|. .+|.+..|-+||..++.++ +.+.|++=
T Consensus 125 ~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 125 SHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred cCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 444 5789999999986655443 45677654
No 380
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=87.55 E-value=25 Score=32.91 Aligned_cols=191 Identities=16% Similarity=0.112 Sum_probs=107.5
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEe--CCCcEEE
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY--EDGSILV 244 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~--~dg~i~~ 244 (383)
+.+++.++.. ...+.|.+.|+++........-...+ ..+ .+.+. +....++-. .++++-+
T Consensus 83 ~~~~~vyv~~-~~~~~v~vid~~~~~~~~~~~vG~~P---------~~~-----~~~~~---~~~vYV~n~~~~~~~vsv 144 (381)
T COG3391 83 PAGNKVYVTT-GDSNTVSVIDTATNTVLGSIPVGLGP---------VGL-----AVDPD---GKYVYVANAGNGNNTVSV 144 (381)
T ss_pred CCCCeEEEec-CCCCeEEEEcCcccceeeEeeeccCC---------ceE-----EECCC---CCEEEEEecccCCceEEE
Confidence 4444444433 33578999998777765544321111 111 11111 112233333 4678888
Q ss_pred EeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeee-eecCCCCeEEEEECCCCcEE
Q 016769 245 WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKE-INLERPGISGTSIRPDSKIA 322 (383)
Q Consensus 245 wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~-~~~~~~~i~~~~~~p~~~~l 322 (383)
.|-.+... +.....-..| ..+.+++++..++... .++++.+.|.+...... -... ..........+.++|+++++
T Consensus 145 id~~t~~~-~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~ 221 (381)
T COG3391 145 IDAATNKV-TATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRV 221 (381)
T ss_pred EeCCCCeE-EEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cccccccccCCCCceEEECCCCCEE
Confidence 88665433 3334333345 7889999998665554 68889999865432110 0000 01112345678999999865
Q ss_pred EEEeCC---CcEEEEEcCCCceEEEeccccc-ceeEEEEeCCCCEEEEE-eCCCcEEEEeC
Q 016769 323 ATAGWD---RRVRIYNYRKGSALAILKYHHA-TCNAVSFSSDCKLMASA-SEDSTVALWEL 378 (383)
Q Consensus 323 ~s~~~d---g~i~iwd~~~~~~~~~~~~h~~-~v~~v~~spd~~~las~-s~d~~i~~w~~ 378 (383)
...-.. +++...|..++........-.. ....++++|+|+.+-.. +..+.+.+-|.
T Consensus 222 yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~ 282 (381)
T COG3391 222 YVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDG 282 (381)
T ss_pred EEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeC
Confidence 554443 5899999988877654211111 45667899999966555 33466666654
No 381
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=87.45 E-value=29 Score=33.67 Aligned_cols=96 Identities=4% Similarity=0.001 Sum_probs=54.6
Q ss_pred ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEE-----------------EeCCCcEEEEEcC
Q 016769 275 GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT-----------------AGWDRRVRIYNYR 337 (383)
Q Consensus 275 ~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s-----------------~~~dg~i~iwd~~ 337 (383)
.++.++.+|.+...|.++. ..+...... ...++.+| +..++. ...+|.+.-.|+.
T Consensus 303 ~V~~g~~~G~l~ald~~tG--~~~W~~~~~-----~~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~ 374 (488)
T cd00216 303 AIVHAPKNGFFYVLDRTTG--KLISARPEV-----EQPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPK 374 (488)
T ss_pred EEEEECCCceEEEEECCCC--cEeeEeEee-----ccccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCC
Confidence 3566778888877776543 443332221 11233344 222221 1246788889999
Q ss_pred CCceEEEeccc--c------cce--eEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 338 KGSALAILKYH--H------ATC--NAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 338 ~~~~~~~~~~h--~------~~v--~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+++.+...... . .+. ..+. -.+..|..++.||.++.+|...
T Consensus 375 tG~~~W~~~~~~~~~~~~~g~~~~~~~~~--~~g~~v~~g~~dG~l~ald~~t 425 (488)
T cd00216 375 TGKVVWEKREGTIRDSWNIGFPHWGGSLA--TAGNLVFAGAADGYFRAFDATT 425 (488)
T ss_pred CCcEeeEeeCCccccccccCCcccCcceE--ecCCeEEEECCCCeEEEEECCC
Confidence 99988765422 1 111 1122 2456788889999999888754
No 382
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=87.33 E-value=3.6 Score=24.09 Aligned_cols=31 Identities=13% Similarity=0.180 Sum_probs=22.2
Q ss_pred CCCcEEEEEe-CCCcEEEEEcCCCceEEEecc
Q 016769 317 PDSKIAATAG-WDRRVRIYNYRKGSALAILKY 347 (383)
Q Consensus 317 p~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~ 347 (383)
|+++++.++. .+++|.++|..+++.+..+.-
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 4666555444 588999999988887766653
No 383
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=87.26 E-value=19 Score=31.29 Aligned_cols=108 Identities=12% Similarity=0.047 Sum_probs=62.1
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.++.|+-.+.++--|..++... ..+.-...+.+-+.- -++.++.|+..+.+.+-+.+..+.-..+ .. .+.-+ .
T Consensus 25 ~v~igSHs~~~~avd~~sG~~~--We~ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f--~~-~~~vk-~ 97 (354)
T KOG4649|consen 25 LVVIGSHSGIVIAVDPQSGNLI--WEAILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNF--VI-LETVK-V 97 (354)
T ss_pred EEEEecCCceEEEecCCCCcEE--eehhhCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeee--ee-hhhhc-c
Confidence 4566777777777776664311 111011122111111 2345678888888888776644321111 11 11101 1
Q ss_pred EEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEec
Q 016769 312 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK 346 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 346 (383)
.....+++..+.+|+.|++.+..|..+...++..+
T Consensus 98 ~a~~d~~~glIycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 98 RAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred ceEEcCCCceEEEecCCCcEEEecccccceEEecc
Confidence 23456789999999999999999999887776543
No 384
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=86.30 E-value=2.6 Score=25.33 Aligned_cols=29 Identities=21% Similarity=0.273 Sum_probs=24.7
Q ss_pred ceeEEEEeCCC---CEEEEEeCCCcEEEEeCC
Q 016769 351 TCNAVSFSSDC---KLMASASEDSTVALWELY 379 (383)
Q Consensus 351 ~v~~v~~spd~---~~las~s~d~~i~~w~~~ 379 (383)
.|-++.|||+. .+||.+=.-+.|.|+|+.
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R 33 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR 33 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence 57789999854 489999999999999986
No 385
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.06 E-value=23 Score=33.35 Aligned_cols=102 Identities=10% Similarity=0.059 Sum_probs=66.4
Q ss_pred ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC
Q 016769 259 VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 259 ~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~ 338 (383)
...++|.++.|+++.+.++.--.+++|.+++....+........-+.....|-++.|+.+ .-+|--+..| +-+|-...
T Consensus 64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~p 141 (657)
T KOG2377|consen 64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLP 141 (657)
T ss_pred cCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEch
Confidence 345689999999999989999999999999874332211111111222335778888755 4455555444 66676644
Q ss_pred C-ceEEEecccccceeEEEEeCCCC
Q 016769 339 G-SALAILKYHHATCNAVSFSSDCK 362 (383)
Q Consensus 339 ~-~~~~~~~~h~~~v~~v~~spd~~ 362 (383)
. +.+...+.|...|+--+|.|+-+
T Consensus 142 ekrslRlVks~~~nvnWy~yc~et~ 166 (657)
T KOG2377|consen 142 EKRSLRLVKSHNLNVNWYMYCPETA 166 (657)
T ss_pred hhhhhhhhhhcccCccEEEEccccc
Confidence 2 33445567788888888999877
No 386
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=85.72 E-value=18 Score=36.03 Aligned_cols=68 Identities=16% Similarity=0.098 Sum_probs=47.7
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEec-ccccceeEEEEe--CCCCEEEEEeCCCcEEEEe
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK-YHHATCNAVSFS--SDCKLMASASEDSTVALWE 377 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~v~~s--pd~~~las~s~d~~i~~w~ 377 (383)
..-+.-+.-++..+.-+...++.|||...+.....-. ...+.|.++.|. ||++.+.+.+..+.|.++-
T Consensus 32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 3334444455555555566789999998877543222 346789999884 8999888888899888873
No 387
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=84.75 E-value=22 Score=33.01 Aligned_cols=62 Identities=15% Similarity=0.107 Sum_probs=39.6
Q ss_pred CCeEEEEECCCCcEEEEEeCC-------------------CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEe
Q 016769 308 PGISGTSIRPDSKIAATAGWD-------------------RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASAS 368 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~d-------------------g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s 368 (383)
...+.+.+.|||.+.++-+.. +.|..+|.+.++. ..+.......+.++|+|+|+++++-.
T Consensus 124 ~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~-e~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 124 HSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKL-RVVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred ccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeE-EEEecCcCCCccceECCCCCEEEEcc
Confidence 347789999999876655421 4566666655443 33332234467899999999887654
Q ss_pred CC
Q 016769 369 ED 370 (383)
Q Consensus 369 ~d 370 (383)
.+
T Consensus 203 ~~ 204 (367)
T TIGR02604 203 DD 204 (367)
T ss_pred CC
Confidence 33
No 388
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=84.32 E-value=14 Score=33.22 Aligned_cols=69 Identities=12% Similarity=0.117 Sum_probs=37.4
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
..+..+..++||++++.+..-....-||--...-...-+.-.+.|.++.|+||+.+...+ +.|.|++=+
T Consensus 145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp --EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred ceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 567788888999988876544444566653221111222345789999999998865544 777776544
No 389
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=83.75 E-value=17 Score=31.12 Aligned_cols=73 Identities=16% Similarity=0.176 Sum_probs=41.8
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccccc-c-------eeEEEEeCCCC-EEEEEeCCCcEEEEeC
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA-T-------CNAVSFSSDCK-LMASASEDSTVALWEL 378 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~-~-------v~~v~~spd~~-~las~s~d~~i~~w~~ 378 (383)
...+.-.++|+|+|++ |.....=..+....+..+.-+.+|+- . -+.++|+.|.+ +...-|.+-.|.-||.
T Consensus 109 nR~NDgkvdP~Gryy~-GtMad~~~~le~~~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dy 187 (310)
T KOG4499|consen 109 NRLNDGKVDPDGRYYG-GTMADFGDDLEPIGGELYSWLAGHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDY 187 (310)
T ss_pred cccccCccCCCCceee-eeeccccccccccccEEEEeccCCCceeeehhccCCccccccccCcEEEEEccCceEEeeeec
Confidence 3455666889999854 33211111222233343333334432 1 26678887777 5677888888988986
Q ss_pred CCC
Q 016769 379 YPP 381 (383)
Q Consensus 379 ~~~ 381 (383)
.-|
T Consensus 188 d~~ 190 (310)
T KOG4499|consen 188 DCP 190 (310)
T ss_pred CCC
Confidence 544
No 390
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=83.26 E-value=8.3 Score=31.47 Aligned_cols=29 Identities=14% Similarity=0.271 Sum_probs=24.3
Q ss_pred ceeEEEEeCCC-----C-EEEEEeCCCcEEEEeCC
Q 016769 351 TCNAVSFSSDC-----K-LMASASEDSTVALWELY 379 (383)
Q Consensus 351 ~v~~v~~spd~-----~-~las~s~d~~i~~w~~~ 379 (383)
.+.+++|||-| + +||.-..++.|.||.-.
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 68899999943 3 89999999999999753
No 391
>PHA02713 hypothetical protein; Provisional
Probab=83.15 E-value=23 Score=35.06 Aligned_cols=59 Identities=10% Similarity=0.118 Sum_probs=34.9
Q ss_pred CCcEEEEEeCCC------cEEEEEcCC-Cc--eEEEecccccceeEEEEeCCCCEEEEEeCCC--cEEEEeC
Q 016769 318 DSKIAATAGWDR------RVRIYNYRK-GS--ALAILKYHHATCNAVSFSSDCKLMASASEDS--TVALWEL 378 (383)
Q Consensus 318 ~~~~l~s~~~dg------~i~iwd~~~-~~--~~~~~~~h~~~v~~v~~spd~~~las~s~d~--~i~~w~~ 378 (383)
+++..+.|+.++ .+..||.++ .+ .+..+.........+.+ +|++.+.|+.|+ .+..||.
T Consensus 463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~ 532 (557)
T PHA02713 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNV 532 (557)
T ss_pred CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCc
Confidence 566677777652 467788876 32 23333322222333333 789999999998 5555554
No 392
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=83.13 E-value=13 Score=34.44 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=32.6
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEE-EcCC-----Cc--eE-EEecc----cccceeEEEEeCCCCEEEEEe
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIY-NYRK-----GS--AL-AILKY----HHATCNAVSFSSDCKLMASAS 368 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iw-d~~~-----~~--~~-~~~~~----h~~~v~~v~~spd~~~las~s 368 (383)
...++++.+++ .++ ++.. .|..| |.+. ++ .+ ..+.. +....+.++|.|||++.++-+
T Consensus 73 ~p~Gi~~~~~G-lyV-~~~~-~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 73 MVTGLAVAVGG-VYV-ATPP-DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred CccceeEecCC-EEE-eCCC-eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 45788898888 544 3444 34444 4421 12 12 22222 244578899999999766544
No 393
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=82.81 E-value=33 Score=31.33 Aligned_cols=106 Identities=15% Similarity=0.167 Sum_probs=55.2
Q ss_pred eEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee---eecCCCCeEEEEECCC----CcEEEEEeCC--------
Q 016769 264 VLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE---INLERPGISGTSIRPD----SKIAATAGWD-------- 328 (383)
Q Consensus 264 v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~---~~~~~~~i~~~~~~p~----~~~l~s~~~d-------- 328 (383)
.+.|++.|++.. +.+-..|.|.+++.+ ......+... ......+...++|+|+ +.+.++.+..
T Consensus 4 P~~~a~~pdG~l-~v~e~~G~i~~~~~~-g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~ 81 (331)
T PF07995_consen 4 PRSMAFLPDGRL-LVAERSGRIWVVDKD-GSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND 81 (331)
T ss_dssp EEEEEEETTSCE-EEEETTTEEEEEETT-TEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred ceEEEEeCCCcE-EEEeCCceEEEEeCC-CcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence 457888888754 555679999998832 2211111111 1123456889999995 4444444422
Q ss_pred CcEEEEEcCCC-------ceE-EEecc---cccceeEEEEeCCCCEEEEEeCCC
Q 016769 329 RRVRIYNYRKG-------SAL-AILKY---HHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 329 g~i~iwd~~~~-------~~~-~~~~~---h~~~v~~v~~spd~~~las~s~d~ 371 (383)
.+|.-|....+ +.+ ..+.. .......++|.|||.++++.+..+
T Consensus 82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~ 135 (331)
T PF07995_consen 82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG 135 (331)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence 24555555433 111 11111 233456799999998777666554
No 394
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=82.52 E-value=11 Score=37.22 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=27.7
Q ss_pred eEEEEECC----CCcEEEEEeCCCcEEEEEcCCCceEEEe
Q 016769 310 ISGTSIRP----DSKIAATAGWDRRVRIYNYRKGSALAIL 345 (383)
Q Consensus 310 i~~~~~~p----~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 345 (383)
....++++ +..++++-+.|+++|+||+.+++++.+.
T Consensus 217 ~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 217 AASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred cceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 45566666 6789999999999999999999885543
No 395
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=82.33 E-value=18 Score=36.50 Aligned_cols=105 Identities=14% Similarity=0.134 Sum_probs=68.4
Q ss_pred CceEEEEcCCcEEEEEccC-------C-------CCeeEEeeee-ecCCCCeEEEEEC--CCCcEEEEEeCCCcEEEEEc
Q 016769 274 NGGISGGADQKIVLYNLDH-------S-------TGSCVIKKEI-NLERPGISGTSIR--PDSKIAATAGWDRRVRIYNY 336 (383)
Q Consensus 274 ~~~~s~~~d~~i~~wdl~~-------~-------~~~~~~~~~~-~~~~~~i~~~~~~--p~~~~l~s~~~dg~i~iwd~ 336 (383)
..|+.|..||.|.+|..+. . ..+...+..+ .....++++++++ ...++||+++....|.||-.
T Consensus 115 EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf 194 (717)
T PF08728_consen 115 EVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAF 194 (717)
T ss_pred eEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEEEE
Confidence 3567888999999997521 0 0000000111 1123478899998 88889999999998888865
Q ss_pred CC--CceEEE-ecccccceeEEEEeCCC-----C-EEEEEeCCCcEEEEeC
Q 016769 337 RK--GSALAI-LKYHHATCNAVSFSSDC-----K-LMASASEDSTVALWEL 378 (383)
Q Consensus 337 ~~--~~~~~~-~~~h~~~v~~v~~spd~-----~-~las~s~d~~i~~w~~ 378 (383)
.. .+.... -..|...|-+|+|-++. . +|++++-.|.+-+|++
T Consensus 195 ~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 195 ALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred eccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 43 221111 11256678899997643 2 8999999999988877
No 396
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=81.67 E-value=40 Score=30.37 Aligned_cols=106 Identities=4% Similarity=-0.015 Sum_probs=55.7
Q ss_pred ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCc
Q 016769 261 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS 340 (383)
Q Consensus 261 ~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~ 340 (383)
...+..+...+++.+++++...+...-||-... ............+..+.|.|++...+ ....|.|+.=+.. .
T Consensus 144 ~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~----~w~~~~r~~~~riq~~gf~~~~~lw~-~~~Gg~~~~s~~~--~ 216 (302)
T PF14870_consen 144 SGSINDITRSSDGRYVAVSSRGNFYSSWDPGQT----TWQPHNRNSSRRIQSMGFSPDGNLWM-LARGGQIQFSDDP--D 216 (302)
T ss_dssp ---EEEEEE-TTS-EEEEETTSSEEEEE-TT-S----S-EEEE--SSS-EEEEEE-TTS-EEE-EETTTEEEEEE-T--T
T ss_pred cceeEeEEECCCCcEEEEECcccEEEEecCCCc----cceEEccCccceehhceecCCCCEEE-EeCCcEEEEccCC--C
Confidence 356677777888887766655555667763321 12222223346799999999987655 4488888876621 1
Q ss_pred eEEEecc-------cccceeEEEEeCCCCEEEEEeCCCcE
Q 016769 341 ALAILKY-------HHATCNAVSFSSDCKLMASASEDSTV 373 (383)
Q Consensus 341 ~~~~~~~-------h~~~v~~v~~spd~~~las~s~d~~i 373 (383)
....+.. -.-.+..++|.|++...|+|+....+
T Consensus 217 ~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~ 256 (302)
T PF14870_consen 217 DGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLL 256 (302)
T ss_dssp EEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT-EE
T ss_pred CccccccccCCcccCceeeEEEEecCCCCEEEEeCCccEE
Confidence 1222222 12237899999998888877765433
No 397
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=81.60 E-value=23 Score=31.05 Aligned_cols=102 Identities=13% Similarity=0.209 Sum_probs=57.3
Q ss_pred CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe------
Q 016769 272 SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL------ 345 (383)
Q Consensus 272 ~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~------ 345 (383)
.++.++.|..+| +.++++......... . ....|..+.+-|+-+.+++= .|++++++++........-
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i---~--~~~~I~ql~vl~~~~~llvL-sd~~l~~~~L~~l~~~~~~~~~~~~ 78 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRI---L--KLSSITQLSVLPELNLLLVL-SDGQLYVYDLDSLEPVSTSAPLAFP 78 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeE---e--ecceEEEEEEecccCEEEEE-cCCccEEEEchhhcccccccccccc
Confidence 456778887777 888888322211111 1 12348889888877765554 3699999999764433210
Q ss_pred --------cccccceeEEE--EeCCC-CEEEEEeCCCcEEEEeCCCC
Q 016769 346 --------KYHHATCNAVS--FSSDC-KLMASASEDSTVALWELYPP 381 (383)
Q Consensus 346 --------~~h~~~v~~v~--~spd~-~~las~s~d~~i~~w~~~~~ 381 (383)
....+.+...+ =...+ ..|+.+.. ..|.+|.+.++
T Consensus 79 ~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~k-k~i~i~~~~~~ 124 (275)
T PF00780_consen 79 KSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVK-KKILIYEWNDP 124 (275)
T ss_pred ccccccccccccCCeeEEeeccccccceEEEEEEC-CEEEEEEEECC
Confidence 01122333333 01233 35555544 48888887654
No 398
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=80.79 E-value=52 Score=31.16 Aligned_cols=143 Identities=13% Similarity=0.196 Sum_probs=82.4
Q ss_pred EEEEEeCCCcEEEEeCCCCC-Cc--eeeeeccccCeEEEEEeC----CCCceEEEEcCCcEEEEEccCCCCe------eE
Q 016769 232 NVLAGYEDGSILVWDIRNPG-IP--LTAMKVHLEPVLCLSIDE----SCNGGISGGADQKIVLYNLDHSTGS------CV 298 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~-~~--~~~~~~h~~~v~~~~~~~----~~~~~~s~~~d~~i~~wdl~~~~~~------~~ 298 (383)
.++.|+..|.++||+..... .+ +..-..-..||..+.... .....++.=.-+.+.+|.+....+. ..
T Consensus 39 ~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~~~~ 118 (418)
T PF14727_consen 39 KIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGNQYQ 118 (418)
T ss_pred EEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCcEEE
Confidence 58889999999999985432 11 111122346888777632 1112223334456677777433222 11
Q ss_pred Eee--eeecCCCCeEEEEECC----C-CcEEEEEeCCCcEEEEEcCCCceEEEecc--cccceeEEEEeCCCCEEEEEeC
Q 016769 299 IKK--EINLERPGISGTSIRP----D-SKIAATAGWDRRVRIYNYRKGSALAILKY--HHATCNAVSFSSDCKLMASASE 369 (383)
Q Consensus 299 ~~~--~~~~~~~~i~~~~~~p----~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~v~~spd~~~las~s~ 369 (383)
+.. +.... .....+..-| . ..++..=+.||++.+|+-+.-.....+.. ++++ +.++|.-..+++++.
T Consensus 119 L~~~yeh~l~-~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgP---l~Y~~~tDsfvt~ss 194 (418)
T PF14727_consen 119 LELIYEHSLQ-RTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGP---LCYCPRTDSFVTASS 194 (418)
T ss_pred EEEEEEEecc-cceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcC---eEEeecCCEEEEecC
Confidence 111 11111 1223333322 2 34677788999999999876543333332 3444 568888788999999
Q ss_pred CCcEEEEeC
Q 016769 370 DSTVALWEL 378 (383)
Q Consensus 370 d~~i~~w~~ 378 (383)
+..+..|..
T Consensus 195 s~~l~~Yky 203 (418)
T PF14727_consen 195 SWTLECYKY 203 (418)
T ss_pred ceeEEEecH
Confidence 988888864
No 399
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=79.13 E-value=17 Score=34.46 Aligned_cols=48 Identities=19% Similarity=0.482 Sum_probs=35.9
Q ss_pred cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 330 RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.|+||+. .|+.+..+.--.+.+.++.|+.+ ..|+.-..||.++++|+.
T Consensus 62 ~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 62 SIQIYSS-SGKLLSSIPWDSGRIVGMGWTDD-EELVVVQSDGTVRVYDLF 109 (410)
T ss_pred EEEEECC-CCCEeEEEEECCCCEEEEEECCC-CeEEEEEcCCEEEEEeCC
Confidence 4888877 46666654433378999999875 566778899999999983
No 400
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.05 E-value=7 Score=34.35 Aligned_cols=61 Identities=16% Similarity=0.302 Sum_probs=44.9
Q ss_pred EECCCCcEEEEEeCC-----CcEEEEEcCCC-ceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 314 SIRPDSKIAATAGWD-----RRVRIYNYRKG-SALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 314 ~~~p~~~~l~s~~~d-----g~i~iwd~~~~-~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
.|||||++|.+.=.| |.|-+||.+.+ ..+..+..|.--...+.+.+||+.|+.+. |-|+.-
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan--GGIeth 186 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN--GGIETH 186 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC--Cceecc
Confidence 388999998876543 68899999754 34556777776677788999999988764 445543
No 401
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=78.85 E-value=66 Score=31.24 Aligned_cols=67 Identities=9% Similarity=0.077 Sum_probs=40.3
Q ss_pred EEECCCCcEEEEEeCCC------------------cEEEEEcCCCceEEEeccccccee------EEEEe----CCCC--
Q 016769 313 TSIRPDSKIAATAGWDR------------------RVRIYNYRKGSALAILKYHHATCN------AVSFS----SDCK-- 362 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg------------------~i~iwd~~~~~~~~~~~~h~~~v~------~v~~s----pd~~-- 362 (383)
.++.+.+..++.++.|+ .|.-+|+.+|+....++.-..... ...+. -++.
T Consensus 222 pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~ 301 (488)
T cd00216 222 PTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPV 301 (488)
T ss_pred eeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCee
Confidence 44555556677777665 799999999999877642111111 01111 1232
Q ss_pred -EEEEEeCCCcEEEEeCC
Q 016769 363 -LMASASEDSTVALWELY 379 (383)
Q Consensus 363 -~las~s~d~~i~~w~~~ 379 (383)
.++.++.+|.+...|..
T Consensus 302 ~~V~~g~~~G~l~ald~~ 319 (488)
T cd00216 302 PAIVHAPKNGFFYVLDRT 319 (488)
T ss_pred EEEEEECCCceEEEEECC
Confidence 56778888888777664
No 402
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=77.89 E-value=6.5 Score=21.54 Aligned_cols=25 Identities=12% Similarity=0.082 Sum_probs=20.3
Q ss_pred EEEEEeCCCcEEEEEcCCCceEEEe
Q 016769 321 IAATAGWDRRVRIYNYRKGSALAIL 345 (383)
Q Consensus 321 ~l~s~~~dg~i~iwd~~~~~~~~~~ 345 (383)
.+..++.++.+..+|..+|+.+..+
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 5666788999999999999877643
No 403
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=77.77 E-value=95 Score=32.47 Aligned_cols=92 Identities=15% Similarity=0.236 Sum_probs=60.6
Q ss_pred CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCC
Q 016769 282 DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDC 361 (383)
Q Consensus 282 d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~ 361 (383)
.|+|.++.+...+ +.....+... .+.+.++.. -+|+++| +-...|++|++.+.+.+..-..|...+..+.+.-.|
T Consensus 806 ~GRIivfe~~e~~-~L~~v~e~~v-~Gav~aL~~-fngkllA--~In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~g 880 (1096)
T KOG1897|consen 806 NGRIIVFEFEELN-SLELVAETVV-KGAVYALVE-FNGKLLA--GINQSVRLYEWTTERELRIECNISNPIIALDLQVKG 880 (1096)
T ss_pred cceEEEEEEecCC-ceeeeeeeee-ccceeehhh-hCCeEEE--ecCcEEEEEEccccceehhhhcccCCeEEEEEEecC
Confidence 3777788776522 2222222222 133444333 3677776 567889999999887776666788889889888888
Q ss_pred CEEEEEeCCCcEEEEeC
Q 016769 362 KLMASASEDSTVALWEL 378 (383)
Q Consensus 362 ~~las~s~d~~i~~w~~ 378 (383)
..++.|.-=+.|.+-..
T Consensus 881 deI~VgDlm~Sitll~y 897 (1096)
T KOG1897|consen 881 DEIAVGDLMRSITLLQY 897 (1096)
T ss_pred cEEEEeeccceEEEEEE
Confidence 88888877666666543
No 404
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=77.63 E-value=18 Score=34.52 Aligned_cols=60 Identities=15% Similarity=0.186 Sum_probs=41.6
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
...|+|+||.-|-||+||.-..+.-..+.+-...|..|..+.+|+++.+.... ++-+-|+
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~ 631 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDV 631 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEec
Confidence 34599999999999999984333333455667789999999999966554433 3444443
No 405
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=75.63 E-value=54 Score=28.59 Aligned_cols=67 Identities=16% Similarity=0.182 Sum_probs=41.0
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEE-cCCCceE-EEeccc--ccceeEEEEeCCCCEEEEEe---CCCcEEE
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYN-YRKGSAL-AILKYH--HATCNAVSFSSDCKLMASAS---EDSTVAL 375 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd-~~~~~~~-~~~~~h--~~~v~~v~~spd~~~las~s---~d~~i~~ 375 (383)
.+..-+|++++...+....+...+++. ...+... ..+..- ...|.++++||||..+|.-. .++.|.+
T Consensus 67 ~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~v 140 (253)
T PF10647_consen 67 SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYV 140 (253)
T ss_pred ccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEE
Confidence 566677889987766666666667764 3333221 112111 12799999999999766554 3455544
No 406
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=75.61 E-value=3.7 Score=40.49 Aligned_cols=34 Identities=18% Similarity=0.363 Sum_probs=25.9
Q ss_pred ceeeEEEeC----CCCeEEEecCCCeEEEeeCcccccc
Q 016769 20 SVTDVCFHQ----TKPILFAGTTGGELRIWDTVQHRTV 53 (383)
Q Consensus 20 ~V~~v~f~~----~~~~L~sgs~D~~v~vW~~~~~~~~ 53 (383)
.+.+++.+. +..+|++.+.|+++|+||+.+++++
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~ 253 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCL 253 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEE
Confidence 344555555 6689999999999999999988874
No 407
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=75.44 E-value=79 Score=30.34 Aligned_cols=106 Identities=21% Similarity=0.255 Sum_probs=55.6
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee-ee--ecCCCCeEEEEECCCC------cEEEEEe-C-----
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK-EI--NLERPGISGTSIRPDS------KIAATAG-W----- 327 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~-~~--~~~~~~i~~~~~~p~~------~~l~s~~-~----- 327 (383)
.-..|.|.+++..+++--..|+|++++-+.......... .. .....+..+++|+|+- ++|.... .
T Consensus 31 ~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~~ 110 (454)
T TIGR03606 31 KPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNGDK 110 (454)
T ss_pred CceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCCCC
Confidence 445778888876555544468888886443221111110 11 1135678999999885 2333321 1
Q ss_pred ----CCcEEEEEcCCC-------ceEE-Ee---cccccceeEEEEeCCCCEEEEEeCC
Q 016769 328 ----DRRVRIYNYRKG-------SALA-IL---KYHHATCNAVSFSSDCKLMASASED 370 (383)
Q Consensus 328 ----dg~i~iwd~~~~-------~~~~-~~---~~h~~~v~~v~~spd~~~las~s~d 370 (383)
...|.-|.+... +.+. .+ ..|. -..++|.|||+++++.++.
T Consensus 111 ~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~--GgrI~FgPDG~LYVs~GD~ 166 (454)
T TIGR03606 111 ELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHN--GGRLVFGPDGKIYYTIGEQ 166 (454)
T ss_pred CccCCcEEEEEEecCCCCccccceEEEecCCCCCCcC--CceEEECCCCcEEEEECCC
Confidence 234555655321 1111 11 1233 3567899999966654443
No 408
>PRK13616 lipoprotein LpqB; Provisional
Probab=75.02 E-value=94 Score=31.05 Aligned_cols=69 Identities=17% Similarity=0.172 Sum_probs=44.1
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEE---EEcCCCce-EE---Eec-ccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRI---YNYRKGSA-LA---ILK-YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~i---wd~~~~~~-~~---~~~-~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
..|..+.++|||..++... +++|.+ -....|.. +. .+. +-...+.+++|.+++.++ .+..++...+|.+
T Consensus 448 g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 448 GPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV 524 (591)
T ss_pred CCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence 4699999999999877665 577777 44344431 10 121 223335788999998854 5555565666654
No 409
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=74.80 E-value=8.6 Score=22.19 Aligned_cols=25 Identities=12% Similarity=0.066 Sum_probs=21.3
Q ss_pred EEEEeCCCcEEEEEcCCCceEEEec
Q 016769 322 AATAGWDRRVRIYNYRKGSALAILK 346 (383)
Q Consensus 322 l~s~~~dg~i~iwd~~~~~~~~~~~ 346 (383)
+..++.||.|+-+|.++|+.+..++
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~ 27 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQ 27 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEE
T ss_pred EEEeCCCCEEEEEECCCCCEEEeee
Confidence 4556999999999999999987765
No 410
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=74.14 E-value=18 Score=38.05 Aligned_cols=116 Identities=12% Similarity=0.023 Sum_probs=67.4
Q ss_pred CeEEEEEeCCCC--ceEEEEcCCcEEEEEccCCCCeeEEee-eeecC------CCCeEEEEECCCCc-EEEEEeCCCcEE
Q 016769 263 PVLCLSIDESCN--GGISGGADQKIVLYNLDHSTGSCVIKK-EINLE------RPGISGTSIRPDSK-IAATAGWDRRVR 332 (383)
Q Consensus 263 ~v~~~~~~~~~~--~~~s~~~d~~i~~wdl~~~~~~~~~~~-~~~~~------~~~i~~~~~~p~~~-~l~s~~~dg~i~ 332 (383)
++..+...++.. .++..+.+-.|..||+........... .+..+ ..-..++.++|.-. ..+....|+.|+
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 444444444433 334444555678899865332221111 11111 11234566666543 355567899999
Q ss_pred EEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 333 IYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 333 iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+.-+....+...-..-.....+|+|+|.|+.++.|-.+|++.=|..
T Consensus 182 V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P 227 (1405)
T KOG3630|consen 182 VKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP 227 (1405)
T ss_pred hhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeec
Confidence 8877543322111234567899999999999999999999876644
No 411
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=73.28 E-value=68 Score=28.61 Aligned_cols=142 Identities=14% Similarity=0.104 Sum_probs=82.6
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccc-cCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHL-EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
+..+-++.-+++.|+.++..|...-.... .--.++.+ ++++...+..|.-+.+.|+.+++...+ ............
T Consensus 99 vyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP~l-agrya~~~~d~~ 175 (370)
T COG5276 99 VYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSPQL-AGRYALPGGDTH 175 (370)
T ss_pred EEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCcee-eeeeccCCCCce
Confidence 44455677899999998877654332222 22334444 456666777677788999987765443 222222223334
Q ss_pred EEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccc--cc-ceeEEEEeCCCCEEEEEeCCCcEEEEeCCCCC
Q 016769 312 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HA-TCNAVSFSSDCKLMASASEDSTVALWELYPPH 382 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h--~~-~v~~v~~spd~~~las~s~d~~i~~w~~~~~~ 382 (383)
.++++- ++-..+.+|+-+.+-|+.....-. +.+| .+ .+.++..+++--+++... --+.+-|...|.
T Consensus 176 ~v~ISG--n~AYvA~~d~GL~ivDVSnp~sPv-li~~~n~g~g~~sv~vsdnr~y~vvy~--egvlivd~s~~s 244 (370)
T COG5276 176 DVAISG--NYAYVAWRDGGLTIVDVSNPHSPV-LIGSYNTGPGTYSVSVSDNRAYLVVYD--EGVLIVDVSGPS 244 (370)
T ss_pred eEEEec--CeEEEEEeCCCeEEEEccCCCCCe-EEEEEecCCceEEEEecCCeeEEEEcc--cceEEEecCCCC
Confidence 566654 455556789999999996543321 2122 22 567777776544544433 336666666554
No 412
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=73.15 E-value=58 Score=33.00 Aligned_cols=104 Identities=13% Similarity=0.141 Sum_probs=64.3
Q ss_pred eEEEEEeCCCcEEEEeCCC-------C-----C-------CceeeeeccccCeEEEEEe--CCCCceEEEEcCCcEEEEE
Q 016769 231 VNVLAGYEDGSILVWDIRN-------P-----G-------IPLTAMKVHLEPVLCLSID--ESCNGGISGGADQKIVLYN 289 (383)
Q Consensus 231 ~~~~sg~~dg~i~~wdl~~-------~-----~-------~~~~~~~~h~~~v~~~~~~--~~~~~~~s~~~d~~i~~wd 289 (383)
..|+.|..||.|.+|.++. . . .|.-.+.. ......+++. .....+|.++....|.||-
T Consensus 115 EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v-~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFa 193 (717)
T PF08728_consen 115 EVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRV-GASAWGLDIHDYKKSRLIAVSSNSQEVTVFA 193 (717)
T ss_pred eEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeec-CCceeEEEEEecCcceEEEEecCCceEEEEE
Confidence 3577899999999996521 0 0 01111221 2367778886 5556667777778888876
Q ss_pred ccCCCCeeEEeeeeecCCCCeEEEEECCCC-----c-EEEEEeCCCcEEEEEc
Q 016769 290 LDHSTGSCVIKKEINLERPGISGTSIRPDS-----K-IAATAGWDRRVRIYNY 336 (383)
Q Consensus 290 l~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-----~-~l~s~~~dg~i~iwd~ 336 (383)
+.....+....+. ..+...|.+++|-++. . .|++++-.|++.+|++
T Consensus 194 f~l~~~r~~~~~s-~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 194 FALVDERFYHVPS-HQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred Eeccccccccccc-cccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 6542222111111 1133468888886543 2 7888999999999988
No 413
>PRK10115 protease 2; Provisional
Probab=72.62 E-value=27 Score=35.62 Aligned_cols=71 Identities=20% Similarity=0.171 Sum_probs=45.6
Q ss_pred CeEEEEECCCCcEEEEEeCC-----CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCC------CcEEEEe
Q 016769 309 GISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED------STVALWE 377 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d------~~i~~w~ 377 (383)
.+..+.++||+++|+-+... -.|++-|+.+++.+...-.... ..++|++|++.|+....+ ..|..++
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~ 205 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT 205 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence 35677889999987765432 2688888888764322211222 458999999977665543 3566777
Q ss_pred CCCC
Q 016769 378 LYPP 381 (383)
Q Consensus 378 ~~~~ 381 (383)
+..+
T Consensus 206 lgt~ 209 (686)
T PRK10115 206 IGTP 209 (686)
T ss_pred CCCC
Confidence 7543
No 414
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=72.50 E-value=93 Score=29.82 Aligned_cols=129 Identities=13% Similarity=0.105 Sum_probs=60.2
Q ss_pred CCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCC-------CCee-EEeeeeecC-CCC
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS-------TGSC-VIKKEINLE-RPG 309 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~-------~~~~-~~~~~~~~~-~~~ 309 (383)
++.|.+||+.+. ..+..+.. .+|..+.|++++..++..+.+ .+.+.+.+.. ++.. .+. ...+ ...
T Consensus 125 ~~~i~~yDw~~~-~~i~~i~v--~~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~--~~~E~~~~ 198 (443)
T PF04053_consen 125 SDFICFYDWETG-KLIRRIDV--SAVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFE--LIHEISER 198 (443)
T ss_dssp TTEEEEE-TTT---EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEE--EEEEE-S-
T ss_pred CCCEEEEEhhHc-ceeeEEec--CCCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceE--EEEEecce
Confidence 458999999874 34555543 358899999998877666544 5666554321 0000 000 0011 234
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
|.+..|..+ -++.+. ...++. +..|+ ..++..-..++.-+...|+.+.+....+|+.|..+.+.
T Consensus 199 IkSg~W~~d-~fiYtT--~~~lkY--l~~Ge-~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 199 IKSGCWVED-CFIYTT--SNHLKY--LVNGE-TGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYELD 262 (443)
T ss_dssp -SEEEEETT-EEEEE---TTEEEE--EETTE-EEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE--
T ss_pred eEEEEEEcC-EEEEEc--CCeEEE--EEcCC-cceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEEC
Confidence 555555444 222222 224543 22222 22333334566667788877788888899999888774
No 415
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=71.83 E-value=55 Score=35.19 Aligned_cols=139 Identities=14% Similarity=0.273 Sum_probs=75.1
Q ss_pred CCCcEEEEeCCCCCCceeeeeccccCeEEEEE-e-------CCCCceEEEEcCCcEEEEEccCC--CCe-eEEe--eeee
Q 016769 238 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSI-D-------ESCNGGISGGADQKIVLYNLDHS--TGS-CVIK--KEIN 304 (383)
Q Consensus 238 ~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~-~-------~~~~~~~s~~~d~~i~~wdl~~~--~~~-~~~~--~~~~ 304 (383)
.|+.+.+|+.+++.. ...+.+-...|..+.. - +.-+.++.-++--.|.++-+... +.. ..+. ..+.
T Consensus 97 iDn~L~lWny~~~~e-~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 97 IDNNLFLWNYESDNE-LAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred eCCeEEEEEcCCCCc-cccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 499999999987432 3333332333333332 1 11122333333333444432211 110 0000 1122
Q ss_pred cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC-------Cc------------------eEEEecccccceeEEEEeC
Q 016769 305 LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK-------GS------------------ALAILKYHHATCNAVSFSS 359 (383)
Q Consensus 305 ~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~-------~~------------------~~~~~~~h~~~v~~v~~sp 359 (383)
.....++++....+|+.|.+ |.|| .+|.+.- ++ .+.....+.++|..+++-.
T Consensus 176 ~dg~~V~~I~~t~nGRIF~~-G~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~ 252 (1311)
T KOG1900|consen 176 VDGVSVNCITYTENGRIFFA-GRDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDN 252 (1311)
T ss_pred cCCceEEEEEeccCCcEEEe-ecCC--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecc
Confidence 23345788888888988775 4566 5676621 01 1112235778999988865
Q ss_pred CCCEEEEEeCCCcEEEEeCCC
Q 016769 360 DCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 360 d~~~las~s~d~~i~~w~~~~ 380 (383)
.-..|-+=++-++|.+|++..
T Consensus 253 SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 253 SRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred ccceeeeeccCceEEEEEccC
Confidence 555788889999999999964
No 416
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=71.47 E-value=25 Score=32.03 Aligned_cols=63 Identities=16% Similarity=0.240 Sum_probs=42.1
Q ss_pred cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCc-EEEEE-eCCCcEEEEEcCCCceEEEec
Q 016769 281 ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK-IAATA-GWDRRVRIYNYRKGSALAILK 346 (383)
Q Consensus 281 ~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~s~-~~dg~i~iwd~~~~~~~~~~~ 346 (383)
.|+.-.||-++..++++..+..++. .+.++.++.+.+ .|.+. ..++.+.+||..+++.+..+.
T Consensus 265 KdpgteVWv~D~~t~krv~Ri~l~~---~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 265 KDPGTEVWVYDLKTHKRVARIPLEH---PIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp TS-EEEEEEEETTTTEEEEEEEEEE---EESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred cCCceEEEEEECCCCeEEEEEeCCC---ccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence 3556678888777776665544432 366888887765 55444 468999999999999888775
No 417
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=71.17 E-value=72 Score=28.00 Aligned_cols=106 Identities=12% Similarity=0.041 Sum_probs=55.6
Q ss_pred EEEEeCCCCceEEEEcCC--cEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEE
Q 016769 266 CLSIDESCNGGISGGADQ--KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA 343 (383)
Q Consensus 266 ~~~~~~~~~~~~s~~~d~--~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~ 343 (383)
.+.|..++..+-+.|.-| .|+.+|++.. .......+...- =--++++. +++.....=.+++..+||..+.+.+.
T Consensus 49 GL~~~~~g~LyESTG~yG~S~l~~~d~~tg--~~~~~~~l~~~~-FgEGit~~-~d~l~qLTWk~~~~f~yd~~tl~~~~ 124 (264)
T PF05096_consen 49 GLEFLDDGTLYESTGLYGQSSLRKVDLETG--KVLQSVPLPPRY-FGEGITIL-GDKLYQLTWKEGTGFVYDPNTLKKIG 124 (264)
T ss_dssp EEEEEETTEEEEEECSTTEEEEEEEETTTS--SEEEEEE-TTT---EEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred cEEecCCCEEEEeCCCCCcEEEEEEECCCC--cEEEEEECCccc-cceeEEEE-CCEEEEEEecCCeEEEEccccceEEE
Confidence 344433333333444433 4777877643 333222222111 11234444 33444545568899999999999888
Q ss_pred EecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 344 ILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 344 ~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
++.. ...-+.++ .|++.|+.......++++|.
T Consensus 125 ~~~y-~~EGWGLt--~dg~~Li~SDGS~~L~~~dP 156 (264)
T PF05096_consen 125 TFPY-PGEGWGLT--SDGKRLIMSDGSSRLYFLDP 156 (264)
T ss_dssp EEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-T
T ss_pred EEec-CCcceEEE--cCCCEEEEECCccceEEECC
Confidence 8753 44556666 47776766655666777664
No 418
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=70.94 E-value=14 Score=19.67 Aligned_cols=25 Identities=20% Similarity=0.331 Sum_probs=19.0
Q ss_pred eeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 352 CNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 352 v~~v~~spd~~~las~s~d~~i~~w 376 (383)
...+++.++|+.+++=+....|+++
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 4567788888888888887777664
No 419
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=70.41 E-value=69 Score=31.87 Aligned_cols=133 Identities=17% Similarity=0.178 Sum_probs=62.6
Q ss_pred EEEEeCC------CcEEEEeCCCCCC-ceeeeeccccCeEEEEEeCCCCceEEEEcC-C-----cEEEEEccCCCCeeEE
Q 016769 233 VLAGYED------GSILVWDIRNPGI-PLTAMKVHLEPVLCLSIDESCNGGISGGAD-Q-----KIVLYNLDHSTGSCVI 299 (383)
Q Consensus 233 ~~sg~~d------g~i~~wdl~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d-~-----~i~~wdl~~~~~~~~~ 299 (383)
++.|+.+ ..++.+|..+... .+..+. +.....++.+-.. ...++||.| + .+..||....+ ...
T Consensus 288 ~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~~~-~lYv~GG~~~~~~~l~~ve~YD~~~~~--W~~ 363 (571)
T KOG4441|consen 288 VAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVLNG-KLYVVGGYDSGSDRLSSVERYDPRTNQ--WTP 363 (571)
T ss_pred EEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEECC-EEEEEccccCCCcccceEEEecCCCCc--eec
Confidence 4556655 3678888776421 111121 1112223333322 345777777 2 33455554332 221
Q ss_pred eeeeecCCCCeEEEEECCCCcEEEEEeCCCc-----EEEEEcCCCce--EEEecccccceeEEEEeCCCCEEEEEeCCCc
Q 016769 300 KKEINLERPGISGTSIRPDSKIAATAGWDRR-----VRIYNYRKGSA--LAILKYHHATCNAVSFSSDCKLMASASEDST 372 (383)
Q Consensus 300 ~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~-----i~iwd~~~~~~--~~~~~~h~~~v~~v~~spd~~~las~s~d~~ 372 (383)
...+........... -+|...|.||.||. +-.||..+.+= +..+.........+ .-+|++.+.||.|+.
T Consensus 364 ~a~M~~~R~~~~v~~--l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~--~~~g~iYi~GG~~~~ 439 (571)
T KOG4441|consen 364 VAPMNTKRSDFGVAV--LDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVA--VLGGKLYIIGGGDGS 439 (571)
T ss_pred cCCccCccccceeEE--ECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEE--EECCEEEEEcCcCCC
Confidence 122222222222222 26778899999974 55566654431 11111111111222 237888899997775
Q ss_pred E
Q 016769 373 V 373 (383)
Q Consensus 373 i 373 (383)
-
T Consensus 440 ~ 440 (571)
T KOG4441|consen 440 S 440 (571)
T ss_pred c
Confidence 5
No 420
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=70.10 E-value=24 Score=30.07 Aligned_cols=64 Identities=14% Similarity=0.157 Sum_probs=42.8
Q ss_pred CCCceEEEEcCCcEEEEEccCCCCeeEEee-----eee-------cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC
Q 016769 272 SCNGGISGGADQKIVLYNLDHSTGSCVIKK-----EIN-------LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 272 ~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~-----~~~-------~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~ 338 (383)
.+.+++.-..+|.+++||+.... ..+.. .+. .....|..+.++.+|.-+++-+ +|..+.||.+-
T Consensus 21 ~~~~Ll~iT~~G~l~vWnl~~~k--~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 21 NGSYLLAITSSGLLYVWNLKKGK--AVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred CCCEEEEEeCCCeEEEEECCCCe--eccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 34567888899999999997643 22211 011 2345688888988887666544 67888898753
No 421
>PHA02713 hypothetical protein; Provisional
Probab=70.06 E-value=1.2e+02 Score=30.09 Aligned_cols=49 Identities=14% Similarity=0.182 Sum_probs=23.1
Q ss_pred eEEEEcCC-----cEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC
Q 016769 276 GISGGADQ-----KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD 328 (383)
Q Consensus 276 ~~s~~~d~-----~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d 328 (383)
.+.||.++ .+..||....+. .....+.........+++ +++..+.||.+
T Consensus 355 YviGG~~~~~~~~sve~Ydp~~~~W--~~~~~mp~~r~~~~~~~~--~g~IYviGG~~ 408 (557)
T PHA02713 355 YAIGGQNGTNVERTIECYTMGDDKW--KMLPDMPIALSSYGMCVL--DQYIYIIGGRT 408 (557)
T ss_pred EEECCcCCCCCCceEEEEECCCCeE--EECCCCCcccccccEEEE--CCEEEEEeCCC
Confidence 35566543 367787654321 111122222222222333 67777778765
No 422
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=69.97 E-value=41 Score=31.79 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=29.6
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 348 HHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 348 h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.+++|.++.||||++.||.--.|+.|.+++.-+
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~ 97 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIP 97 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCC
Confidence 456899999999999999999999999998843
No 423
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=69.52 E-value=1.2e+02 Score=30.08 Aligned_cols=132 Identities=15% Similarity=0.113 Sum_probs=60.3
Q ss_pred EEEEEeCC------CcEEEEeCCCCCCceeeeeccccCe-EEEEEeCCCCceEEEEcCCc-----EEEEEccCCCCeeEE
Q 016769 232 NVLAGYED------GSILVWDIRNPGIPLTAMKVHLEPV-LCLSIDESCNGGISGGADQK-----IVLYNLDHSTGSCVI 299 (383)
Q Consensus 232 ~~~sg~~d------g~i~~wdl~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~~s~~~d~~-----i~~wdl~~~~~~~~~ 299 (383)
..++|+.| .++..||.+... -........... ..++. -.+...+.||.||. +..||...... ..
T Consensus 335 lYv~GG~~~~~~~l~~ve~YD~~~~~-W~~~a~M~~~R~~~~v~~-l~g~iYavGG~dg~~~l~svE~YDp~~~~W--~~ 410 (571)
T KOG4441|consen 335 LYVVGGYDSGSDRLSSVERYDPRTNQ-WTPVAPMNTKRSDFGVAV-LDGKLYAVGGFDGEKSLNSVECYDPVTNKW--TP 410 (571)
T ss_pred EEEEccccCCCcccceEEEecCCCCc-eeccCCccCccccceeEE-ECCEEEEEeccccccccccEEEecCCCCcc--cc
Confidence 45677777 467888877643 111111111100 11111 12234467777754 45565543221 11
Q ss_pred eeeeecCCCCeEEEEECCCCcEEEEEeCCC------cEEEEEcCCCc--eEEEecccccceeEEEEeCCCCEEEEEeCCC
Q 016769 300 KKEINLERPGISGTSIRPDSKIAATAGWDR------RVRIYNYRKGS--ALAILKYHHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 300 ~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg------~i~iwd~~~~~--~~~~~~~h~~~v~~v~~spd~~~las~s~d~ 371 (383)
...+.....+...+. -+++..++||.|+ ++..||..+.+ .+..+.. .+.-..++. -++++.+.|+.|+
T Consensus 411 va~m~~~r~~~gv~~--~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~-~R~~~g~a~-~~~~iYvvGG~~~ 486 (571)
T KOG4441|consen 411 VAPMLTRRSGHGVAV--LGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNT-RRSGFGVAV-LNGKIYVVGGFDG 486 (571)
T ss_pred cCCCCcceeeeEEEE--ECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCccc-ccccceEEE-ECCEEEEECCccC
Confidence 111221112222222 3677888888665 45566765543 1111111 111112332 3677888888887
No 424
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=68.86 E-value=1e+02 Score=28.93 Aligned_cols=101 Identities=13% Similarity=0.045 Sum_probs=53.6
Q ss_pred eCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCC-----------cEEEEEccCCCCeeEEeeeeec
Q 016769 237 YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ-----------KIVLYNLDHSTGSCVIKKEINL 305 (383)
Q Consensus 237 ~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~-----------~i~~wdl~~~~~~~~~~~~~~~ 305 (383)
++...|+++|++++...-..+.. .....+.|.+++..++....+. .|.+|.+......-.+..+...
T Consensus 147 ~e~~~l~v~Dl~tg~~l~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~ 224 (414)
T PF02897_consen 147 SEWYTLRVFDLETGKFLPDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPD 224 (414)
T ss_dssp SSEEEEEEEETTTTEEEEEEEEE--EESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TT
T ss_pred CceEEEEEEECCCCcCcCCcccc--cccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecC
Confidence 33345999999885321112211 1112388988877766554333 2677777654433111111111
Q ss_pred CCCCeEEEEECCCCcEEEEEeCC----CcEEEEEcCCC
Q 016769 306 ERPGISGTSIRPDSKIAATAGWD----RRVRIYNYRKG 339 (383)
Q Consensus 306 ~~~~i~~~~~~p~~~~l~s~~~d----g~i~iwd~~~~ 339 (383)
.......+..++|+++++..+.. ..+.+.|+..+
T Consensus 225 ~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 225 EPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp CTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred CCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 11125578889999987654433 34777788764
No 425
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.28 E-value=79 Score=28.18 Aligned_cols=75 Identities=9% Similarity=0.178 Sum_probs=57.0
Q ss_pred CCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe--cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 306 ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL--KYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 306 ~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
....++++.|+|+.+.+.+......--++=-..|+.+.++ .+ -...-.|++..+|++.++-=+++.+.++.+.+.
T Consensus 84 ~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g-~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 84 ETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTG-FSDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred ccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccc-cCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 3345899999999999998887777777666678877655 33 234466788888889988888999888877643
No 426
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=67.61 E-value=29 Score=31.18 Aligned_cols=69 Identities=13% Similarity=0.208 Sum_probs=50.5
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccce---e--EEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC---N--AVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v---~--~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
++++...++|.||+|.-.-.+|.+.|..+++.+..+.+....= . ..++--|-+++-.+..+++|.++|-
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN 219 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN 219 (299)
T ss_pred eeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence 7778888899999999999999999999999998887652210 1 1223334445555678888888886
No 427
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=66.49 E-value=1.2e+02 Score=28.73 Aligned_cols=53 Identities=9% Similarity=0.103 Sum_probs=33.5
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccc-ccceeEEEEeCC
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH-HATCNAVSFSSD 360 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~v~~spd 360 (383)
+.+..+++||+++++|.-..+|++.+...+-.+.+..+.-. ......+.|.-+
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~ 270 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGN 270 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECC
Confidence 45778888888888888888888888776555544433322 223444555443
No 428
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=66.03 E-value=1.2e+02 Score=28.67 Aligned_cols=30 Identities=20% Similarity=0.506 Sum_probs=24.8
Q ss_pred ceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 351 TCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 351 ~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.|.+++.-+..+.|.+.+.++.|.+|++..
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 488899988888999999999999999964
No 429
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=65.69 E-value=1.1e+02 Score=31.47 Aligned_cols=76 Identities=13% Similarity=0.108 Sum_probs=46.6
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEEccC------------CCCeeEEee---e-e-ecCCCCeEEEEECCC---CcEE
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYNLDH------------STGSCVIKK---E-I-NLERPGISGTSIRPD---SKIA 322 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~------------~~~~~~~~~---~-~-~~~~~~i~~~~~~p~---~~~l 322 (383)
.|..+.+++++..++..|..+-. |-.+-. .+..|.... . . ......|..+.|+|. +..|
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~v~-V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRGVV-VLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCcEE-EEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 46777889999888777776543 333311 011111100 0 0 112235778999987 4778
Q ss_pred EEEeCCCcEEEEEcCCC
Q 016769 323 ATAGWDRRVRIYNYRKG 339 (383)
Q Consensus 323 ~s~~~dg~i~iwd~~~~ 339 (383)
+.=++|+++|+||+...
T Consensus 165 ~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 165 VVLTSDNTLRLYDISDP 181 (717)
T ss_pred EEEecCCEEEEEecCCC
Confidence 88899999999999653
No 430
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=64.63 E-value=97 Score=27.02 Aligned_cols=108 Identities=16% Similarity=0.070 Sum_probs=58.5
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEE-ccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe---CCCcEEEEEcC-
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYN-LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG---WDRRVRIYNYR- 337 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wd-l~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~---~dg~i~iwd~~- 337 (383)
.+..-+|++++........+...+++. -...+..... .........|..+.++|||..+|.-. .++.|.+=-+.
T Consensus 67 ~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~-v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r 145 (253)
T PF10647_consen 67 SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVE-VDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVR 145 (253)
T ss_pred ccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEE-ecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEe
Confidence 455566777754434434444445552 1222211111 11111112799999999998766555 45777776553
Q ss_pred --CC--ce----EEEecccccceeEEEEeCCCCEEEEEeCCC
Q 016769 338 --KG--SA----LAILKYHHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 338 --~~--~~----~~~~~~h~~~v~~v~~spd~~~las~s~d~ 371 (383)
.+ .. +.........+.+++|.+++.+++.+...+
T Consensus 146 ~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~ 187 (253)
T PF10647_consen 146 DGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAG 187 (253)
T ss_pred CCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCCC
Confidence 23 11 112223345789999999998766555444
No 431
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=64.25 E-value=59 Score=30.80 Aligned_cols=108 Identities=15% Similarity=0.165 Sum_probs=63.6
Q ss_pred EEEEEeCCCcEEEE-eCCCCCCce----eeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecC
Q 016769 232 NVLAGYEDGSILVW-DIRNPGIPL----TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE 306 (383)
Q Consensus 232 ~~~sg~~dg~i~~w-dl~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~ 306 (383)
.++.++.||-|.-| |.+....+. +.++....++..+..+...+.+++-...|++.++.-.. .+..+. ..-
T Consensus 282 SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~--~~~lL~---~~~ 356 (733)
T COG4590 282 SLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTS--EKLLLF---ERA 356 (733)
T ss_pred eEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeeccc--Ccceeh---hhh
Confidence 47789999999888 555433321 11222223444454455555667777777777654221 111111 111
Q ss_pred CCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe
Q 016769 307 RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL 345 (383)
Q Consensus 307 ~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 345 (383)
...+.-+++||++.++++ -..|+|+++.++...+..++
T Consensus 357 ~~~~~~~~~Sp~~~~Ll~-e~~gki~~~~l~Nr~Peisw 394 (733)
T COG4590 357 YQAPQLVAMSPNQAYLLS-EDQGKIRLAQLENRNPEISW 394 (733)
T ss_pred hcCcceeeeCcccchhee-ecCCceEEEEecCCCCCccH
Confidence 124667889999999886 45788999999776554333
No 432
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=64.04 E-value=33 Score=36.24 Aligned_cols=90 Identities=10% Similarity=-0.006 Sum_probs=53.6
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
.+.+..|+.|++..+.........+. -.....++.|++.+..++.|-..|++..|.-.-.- +..+......+.+.|.+
T Consensus 171 ~av~l~dlsl~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~lei-k~~ip~Pp~~e~yrvl~ 248 (1405)
T KOG3630|consen 171 SAVDLSDLSLRVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEI-KSEIPEPPVEENYRVLS 248 (1405)
T ss_pred hhhhccccchhhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeecccce-eecccCCCcCCCcceeE
Confidence 45577799999887754332222222 23467899999999999999999999888532110 01111111122356777
Q ss_pred EEECCCCcEEEE
Q 016769 313 TSIRPDSKIAAT 324 (383)
Q Consensus 313 ~~~~p~~~~l~s 324 (383)
+.|-..-.+++.
T Consensus 249 v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 249 VTWLSTQEFLVV 260 (1405)
T ss_pred EEEecceeEEEE
Confidence 777544444443
No 433
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=63.75 E-value=1.6e+02 Score=29.14 Aligned_cols=118 Identities=13% Similarity=0.100 Sum_probs=67.2
Q ss_pred ccCeEEEEEeCC----CCceEEEEcCCcEEEEEccCCC---CeeEEeeeeec-CCC--CeEEEEECCCCcEEEEEeCCCc
Q 016769 261 LEPVLCLSIDES----CNGGISGGADQKIVLYNLDHST---GSCVIKKEINL-ERP--GISGTSIRPDSKIAATAGWDRR 330 (383)
Q Consensus 261 ~~~v~~~~~~~~----~~~~~s~~~d~~i~~wdl~~~~---~~~~~~~~~~~-~~~--~i~~~~~~p~~~~l~s~~~dg~ 330 (383)
.+-|..++|.|- ...+++.-..+.|.+|.+.... .+.+....-+. +.. -..++.|||....++.=.....
T Consensus 56 FEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dv 135 (671)
T PF15390_consen 56 FEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDV 135 (671)
T ss_pred cceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCce
Confidence 355677777554 2356666778889999886321 11111111000 000 1235678998877666555554
Q ss_pred EEEEEcCC-CceEEEecccccceeEEEEeCCCCEEEEEeCC-CcEEEEeC
Q 016769 331 VRIYNYRK-GSALAILKYHHATCNAVSFSSDCKLMASASED-STVALWEL 378 (383)
Q Consensus 331 i~iwd~~~-~~~~~~~~~h~~~v~~v~~spd~~~las~s~d-~~i~~w~~ 378 (383)
-.++++.. +.+++.--.-.+.|.|.+|.+||+.|+.+-.. =--++||-
T Consensus 136 SV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~ 185 (671)
T PF15390_consen 136 SVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDS 185 (671)
T ss_pred eEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecC
Confidence 44566643 33444333456789999999999966654433 23366763
No 434
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=61.87 E-value=1.1e+02 Score=26.69 Aligned_cols=113 Identities=12% Similarity=0.193 Sum_probs=64.7
Q ss_pred cCeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCc
Q 016769 262 EPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS 340 (383)
Q Consensus 262 ~~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~ 340 (383)
..+..++++++...+++. ...+.|.-.+++ +..+.+..+. ..+..-++++..++.++++--.++.+.++++....
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~~---G~vlr~i~l~-g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~ 97 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQDEPGEIYELSLD---GKVLRRIPLD-GFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDT 97 (248)
T ss_dssp S-EEEEEEETTTTEEEEEETTTTEEEEEETT-----EEEEEE-S-S-SSEEEEEE-STTEEEEEETTTTEEEEEEE----
T ss_pred CCccccEEcCCCCeEEEEECCCCEEEEEcCC---CCEEEEEeCC-CCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccc
Confidence 347889999987766554 344545444432 3333222222 22457788898888887766568999999994321
Q ss_pred ------eEEEec-----ccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 341 ------ALAILK-----YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 341 ------~~~~~~-----~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.+..+. .+....-.++|.|.++.|..+-+..-..|+.+
T Consensus 98 ~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~ 146 (248)
T PF06977_consen 98 TSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEV 146 (248)
T ss_dssp TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred cccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEE
Confidence 111111 23345789999998887777777766666655
No 435
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=60.84 E-value=1.1e+02 Score=29.12 Aligned_cols=107 Identities=8% Similarity=0.009 Sum_probs=61.7
Q ss_pred CCceEEEEcCCcEEEE-EccCCCCeeEE-eeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccccc
Q 016769 273 CNGGISGGADQKIVLY-NLDHSTGSCVI-KKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA 350 (383)
Q Consensus 273 ~~~~~s~~~d~~i~~w-dl~~~~~~~~~-~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~ 350 (383)
+..++.++.||.|..| |.......... ....+.....+.-+.-..+.+-+++-+..|++..|.....+.+-.-...+
T Consensus 280 g~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~- 358 (733)
T COG4590 280 GFSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQ- 358 (733)
T ss_pred ceeEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhc-
Confidence 3456778889999888 54433222111 11111111122222222234567778888888888776555443222233
Q ss_pred ceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 351 TCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 351 ~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
.+.-+++||.+.+|++-. .|.|+++.+.-+
T Consensus 359 ~~~~~~~Sp~~~~Ll~e~-~gki~~~~l~Nr 388 (733)
T COG4590 359 APQLVAMSPNQAYLLSED-QGKIRLAQLENR 388 (733)
T ss_pred CcceeeeCcccchheeec-CCceEEEEecCC
Confidence 567789999999888764 457898887533
No 436
>PHA03098 kelch-like protein; Provisional
Probab=60.49 E-value=1.6e+02 Score=28.87 Aligned_cols=60 Identities=17% Similarity=0.227 Sum_probs=31.5
Q ss_pred CCcEEEEEeCCC--------cEEEEEcCCCce--EEEecccccceeEEEEeCCCCEEEEEeCC-----CcEEEEeCC
Q 016769 318 DSKIAATAGWDR--------RVRIYNYRKGSA--LAILKYHHATCNAVSFSSDCKLMASASED-----STVALWELY 379 (383)
Q Consensus 318 ~~~~l~s~~~dg--------~i~iwd~~~~~~--~~~~~~h~~~v~~v~~spd~~~las~s~d-----~~i~~w~~~ 379 (383)
+++.++.||.+. .+.+||..+.+= +..+.........+. -++++++.|+.+ ..|.+||..
T Consensus 437 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~ 511 (534)
T PHA03098 437 DGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDK 511 (534)
T ss_pred CCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCC
Confidence 566667776532 378888876532 111111111111222 277888888765 356666653
No 437
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=60.34 E-value=27 Score=22.31 Aligned_cols=17 Identities=29% Similarity=0.389 Sum_probs=13.0
Q ss_pred eeEEEEeCCCCEEEEEe
Q 016769 352 CNAVSFSSDCKLMASAS 368 (383)
Q Consensus 352 v~~v~~spd~~~las~s 368 (383)
+.++++.||||+|+.|.
T Consensus 3 ~~~~~~q~DGkIlv~G~ 19 (55)
T TIGR02608 3 AYAVAVQSDGKILVAGY 19 (55)
T ss_pred eEEEEECCCCcEEEEEE
Confidence 46677888888888875
No 438
>PRK13684 Ycf48-like protein; Provisional
Probab=59.95 E-value=1.4e+02 Score=27.31 Aligned_cols=105 Identities=7% Similarity=0.015 Sum_probs=53.9
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceE
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL 342 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~ 342 (383)
.+..+.+.+++..+ ..+..|.+.. ..+...... ..........+.++.+.|+++.++. +..|.+++=..+.+..-
T Consensus 174 ~~~~i~~~~~g~~v-~~g~~G~i~~-s~~~gg~tW--~~~~~~~~~~l~~i~~~~~g~~~~v-g~~G~~~~~s~d~G~sW 248 (334)
T PRK13684 174 VVRNLRRSPDGKYV-AVSSRGNFYS-TWEPGQTAW--TPHQRNSSRRLQSMGFQPDGNLWML-ARGGQIRFNDPDDLESW 248 (334)
T ss_pred eEEEEEECCCCeEE-EEeCCceEEE-EcCCCCCeE--EEeeCCCcccceeeeEcCCCCEEEE-ecCCEEEEccCCCCCcc
Confidence 45566666665443 3344554432 111111111 1112223356888999999987665 46777653223444322
Q ss_pred EEeccc----ccceeEEEEeCCCCEEEEEeCCCcE
Q 016769 343 AILKYH----HATCNAVSFSSDCKLMASASEDSTV 373 (383)
Q Consensus 343 ~~~~~h----~~~v~~v~~spd~~~las~s~d~~i 373 (383)
.....+ ...+.++.|.|+++.++.| .+|.|
T Consensus 249 ~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v 282 (334)
T PRK13684 249 SKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTL 282 (334)
T ss_pred ccccCCccccccceeeEEEcCCCCEEEEc-CCCeE
Confidence 211111 1346788999988766655 45544
No 439
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=59.23 E-value=2.2 Score=40.13 Aligned_cols=131 Identities=9% Similarity=0.105 Sum_probs=80.8
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCce-EEEEcCCcEEEEEccCCCCeeEEeeeeecCC-CCe
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLER-PGI 310 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~-~~i 310 (383)
++.++.+..+..||-.. ..+.... .......|.+|..++.+ +.+-..+.+.+||++..... .++... ..-
T Consensus 49 lavaca~tiv~~YD~ag--q~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytq-----qLE~gg~~s~ 120 (615)
T KOG2247|consen 49 LAVACANTIVIYYDKAG--QVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQ-----QLESGGTSSK 120 (615)
T ss_pred eehhhhhhHHHhhhhhc--ceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHH-----HHhccCcchH
Confidence 33444455666666322 1111111 12233456667666654 34556788999998753211 111110 111
Q ss_pred EEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCc
Q 016769 311 SGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST 372 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~ 372 (383)
.-+.+++..+.++.+-..|.+.|++..+.+.+.....|.+.+.++++.+++. .+.++.|.+
T Consensus 121 sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~-vil~dcd~~ 181 (615)
T KOG2247|consen 121 SLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY-VILCDCDNT 181 (615)
T ss_pred HHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccce-eeecCcHHH
Confidence 1145788888888899999999999998888877767999999999999864 455555543
No 440
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=58.04 E-value=48 Score=28.01 Aligned_cols=46 Identities=11% Similarity=0.151 Sum_probs=33.3
Q ss_pred EEEEEeCCCcEEEEEcC--CCceEEEecccccceeEEEEeCCCCEEEEE
Q 016769 321 IAATAGWDRRVRIYNYR--KGSALAILKYHHATCNAVSFSSDCKLMASA 367 (383)
Q Consensus 321 ~l~s~~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~v~~spd~~~las~ 367 (383)
.+..+....+|.+|++. ..+.+.++.-- +.|..+..+..|.+|+|=
T Consensus 30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTl 77 (215)
T PF14761_consen 30 ALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTL 77 (215)
T ss_pred eEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEE
Confidence 44334667889999997 33445555433 678999999999999874
No 441
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=56.97 E-value=37 Score=24.23 Aligned_cols=43 Identities=16% Similarity=0.127 Sum_probs=26.5
Q ss_pred EeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEE-EEEe
Q 016769 325 AGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASAS 368 (383)
Q Consensus 325 ~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~l-as~s 368 (383)
+..+|++..||..+++.-..+.+-. ..+.|+++||+..| ++-.
T Consensus 33 ~~~~GRll~ydp~t~~~~vl~~~L~-fpNGVals~d~~~vlv~Et 76 (89)
T PF03088_consen 33 GRPTGRLLRYDPSTKETTVLLDGLY-FPNGVALSPDESFVLVAET 76 (89)
T ss_dssp T---EEEEEEETTTTEEEEEEEEES-SEEEEEE-TTSSEEEEEEG
T ss_pred CCCCcCEEEEECCCCeEEEehhCCC-ccCeEEEcCCCCEEEEEec
Confidence 3446677789998887544444433 56889999999954 4433
No 442
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=56.60 E-value=17 Score=37.29 Aligned_cols=22 Identities=32% Similarity=0.371 Sum_probs=19.4
Q ss_pred ECCCCcEEEEEeCCCcEEEEEc
Q 016769 315 IRPDSKIAATAGWDRRVRIYNY 336 (383)
Q Consensus 315 ~~p~~~~l~s~~~dg~i~iwd~ 336 (383)
++|||..||.++.||.++.|.+
T Consensus 243 lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 243 LSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred eCCCCcEEEEeecCCccceeee
Confidence 7899999999999999888876
No 443
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=56.14 E-value=52 Score=30.84 Aligned_cols=77 Identities=10% Similarity=0.044 Sum_probs=52.0
Q ss_pred CCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeC--CCCEEEEEeCCCcEE--EEeCCCCC
Q 016769 307 RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS--DCKLMASASEDSTVA--LWELYPPH 382 (383)
Q Consensus 307 ~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~sp--d~~~las~s~d~~i~--~w~~~~~~ 382 (383)
...|..+.|-.|--|+++--.-..+.+.|+...+..+.+..-+-+-.+--+|| +++.|-.|-.+|.++ +||++++.
T Consensus 427 gERIYAvRf~gdv~yiVTfrqtDPlfviDlsNPenPkvlGeLKIPGfS~YLHpigen~~lGvG~~~g~vKiSLFdiSdl~ 506 (603)
T COG4880 427 GERIYAVRFVGDVLYIVTFRQTDPLFVIDLSNPENPKVLGELKIPGFSEYLHPIGENRLLGVGAYQGGVKISLFDISDLA 506 (603)
T ss_pred CceEEEEEEeCceEEEEEEeccCceEEEEcCCCCCCceeEEEecCCchhhccccCCCcEEEeecccCCceEEEEeccCCC
Confidence 35688899988888999888888888999976554333321121222223456 456788888888765 59998876
Q ss_pred C
Q 016769 383 A 383 (383)
Q Consensus 383 ~ 383 (383)
+
T Consensus 507 ~ 507 (603)
T COG4880 507 A 507 (603)
T ss_pred C
Confidence 4
No 444
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=55.63 E-value=30 Score=34.75 Aligned_cols=64 Identities=14% Similarity=0.265 Sum_probs=38.8
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
+.++.-+|.++.+++++.||.|++|+.-..++.+.+. ...+-.-+-|..-| |+++..|..+--|
T Consensus 17 ~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~-~~~p~~nlv~tnhg--l~~~tsdrr~la~ 80 (1636)
T KOG3616|consen 17 TTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICE-EAKPKENLVFTNHG--LVTATSDRRALAW 80 (1636)
T ss_pred eeeeeecCCCceEEEEecCCcEEEEeecccchhhhhh-hcCCccceeeeccc--eEEEeccchhhee
Confidence 5566778999999999999999999996544432221 12222233344333 4444445555445
No 445
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=55.57 E-value=52 Score=30.07 Aligned_cols=57 Identities=12% Similarity=0.078 Sum_probs=39.3
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCceEE---E-ecccccceeEEEEeCCCCEEEEEeCCCcEE
Q 016769 318 DSKIAATAGWDRRVRIYNYRKGSALA---I-LKYHHATCNAVSFSSDCKLMASASEDSTVA 374 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~~~~~~~---~-~~~h~~~v~~v~~spd~~~las~s~d~~i~ 374 (383)
.+++|++.-..++|....++....+. . +......+..+++.|||.++++...+|.|.
T Consensus 270 ~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 270 RGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred cCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 45567766667788888887554332 2 233455789999999999999888888764
No 446
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=53.67 E-value=1.4e+02 Score=28.95 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=44.6
Q ss_pred eEEEEEeCCCCceEEEEcCCcEEE-----EEccC--CCCeeEEee-------ee--ecCCCCeEEEEECCCC---cEEEE
Q 016769 264 VLCLSIDESCNGGISGGADQKIVL-----YNLDH--STGSCVIKK-------EI--NLERPGISGTSIRPDS---KIAAT 324 (383)
Q Consensus 264 v~~~~~~~~~~~~~s~~~d~~i~~-----wdl~~--~~~~~~~~~-------~~--~~~~~~i~~~~~~p~~---~~l~s 324 (383)
|..+..++.|..++..|.+|-+.- |--+. ..++..... .+ +...-.+..++|+|+. ..+..
T Consensus 106 V~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~i 185 (741)
T KOG4460|consen 106 VYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVL 185 (741)
T ss_pred EEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEEE
Confidence 455666788877777777875432 32110 011110000 00 0011124567889875 46666
Q ss_pred EeCCCcEEEEEcCCCceEE
Q 016769 325 AGWDRRVRIYNYRKGSALA 343 (383)
Q Consensus 325 ~~~dg~i~iwd~~~~~~~~ 343 (383)
-++|.+||+||+.....++
T Consensus 186 L~sdnviRiy~lS~~tely 204 (741)
T KOG4460|consen 186 LTSDNVIRIYSLSEPTELY 204 (741)
T ss_pred EecCcEEEEEecCCcchhh
Confidence 7889999999997655443
No 447
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=50.54 E-value=39 Score=18.04 Aligned_cols=26 Identities=12% Similarity=0.225 Sum_probs=19.8
Q ss_pred cceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 350 ATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 350 ~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
+.|.+++..+ ++++.+..-+.+|+|.
T Consensus 2 E~i~aia~g~--~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 2 EEIEAIAAGD--SWVAVATSAGYLRIFS 27 (27)
T ss_pred ceEEEEEccC--CEEEEEeCCCeEEecC
Confidence 3577777764 4888888889999984
No 448
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=50.25 E-value=1.8e+02 Score=25.61 Aligned_cols=165 Identities=13% Similarity=0.148 Sum_probs=82.9
Q ss_pred ceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeecc
Q 016769 181 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH 260 (383)
Q Consensus 181 ~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h 260 (383)
..|+.+|+.+++.+.+..-+.. -| +.+++. + .+. ...-.-.++...+||.++ -..+..+...
T Consensus 68 S~l~~~d~~tg~~~~~~~l~~~----~F---gEGit~----~-----~d~-l~qLTWk~~~~f~yd~~t-l~~~~~~~y~ 129 (264)
T PF05096_consen 68 SSLRKVDLETGKVLQSVPLPPR----YF---GEGITI----L-----GDK-LYQLTWKEGTGFVYDPNT-LKKIGTFPYP 129 (264)
T ss_dssp EEEEEEETTTSSEEEEEE-TTT---------EEEEEE----E-----TTE-EEEEESSSSEEEEEETTT-TEEEEEEE-S
T ss_pred EEEEEEECCCCcEEEEEECCcc----cc---ceeEEE----E-----CCE-EEEEEecCCeEEEEcccc-ceEEEEEecC
Confidence 4799999999986554432110 11 112211 1 111 122345678889999875 2334444332
Q ss_pred ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeee-ecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCC
Q 016769 261 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI-NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG 339 (383)
Q Consensus 261 ~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~-~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~ 339 (383)
..-..++.+ +..++.......+.++|-++......+.... ......++.+.+- +|...|--=....|...|..+|
T Consensus 130 -~EGWGLt~d--g~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG 205 (264)
T PF05096_consen 130 -GEGWGLTSD--GKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETG 205 (264)
T ss_dssp -SS--EEEEC--SSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-
T ss_pred -CcceEEEcC--CCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCC
Confidence 223344433 4556665555667777654433222211110 0112345666665 5655554445667778899999
Q ss_pred ceEEEecc------------c---ccceeEEEEeCCCC-EEEEE
Q 016769 340 SALAILKY------------H---HATCNAVSFSSDCK-LMASA 367 (383)
Q Consensus 340 ~~~~~~~~------------h---~~~v~~v~~spd~~-~las~ 367 (383)
+....+.- + ..-.+.||+.|+.+ +++||
T Consensus 206 ~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 206 KVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred eEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 88765421 0 23469999998876 66666
No 449
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=47.01 E-value=37 Score=19.63 Aligned_cols=20 Identities=5% Similarity=-0.115 Sum_probs=14.6
Q ss_pred CcEEEEEeCCCcEEEEEcCC
Q 016769 319 SKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 319 ~~~l~s~~~dg~i~iwd~~~ 338 (383)
+..+..++.||+++.+|.++
T Consensus 21 ~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 21 GGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp TSEEEEE-TTSEEEEEETT-
T ss_pred CCEEEEEcCCCEEEEEeCCC
Confidence 34677788999999999764
No 450
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=46.57 E-value=1.7e+02 Score=26.32 Aligned_cols=69 Identities=17% Similarity=0.188 Sum_probs=46.9
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcC------CCceE-EEecc-----cccceeEEEEeCCC------------CEEE
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYR------KGSAL-AILKY-----HHATCNAVSFSSDC------------KLMA 365 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~------~~~~~-~~~~~-----h~~~v~~v~~spd~------------~~la 365 (383)
-..++++|.+.+-++...-++..+||.. ...++ .++.. -+.....+.|+.-. -.++
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi 104 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL 104 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE
Confidence 4678999999888888888999999996 22222 23321 12345666665321 1367
Q ss_pred EEeCCCcEEEEeC
Q 016769 366 SASEDSTVALWEL 378 (383)
Q Consensus 366 s~s~d~~i~~w~~ 378 (383)
.+++||+|.-|+-
T Consensus 105 f~tEdGTisaW~p 117 (336)
T TIGR03118 105 FVTEDGTLSGWAP 117 (336)
T ss_pred EEeCCceEEeecC
Confidence 8999999999984
No 451
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=46.10 E-value=1.1e+02 Score=21.75 Aligned_cols=29 Identities=17% Similarity=0.266 Sum_probs=22.7
Q ss_pred ceeEEEEeCCCCE-EEEEeCCCcEEEEeCC
Q 016769 351 TCNAVSFSSDCKL-MASASEDSTVALWELY 379 (383)
Q Consensus 351 ~v~~v~~spd~~~-las~s~d~~i~~w~~~ 379 (383)
..+.|.++|++++ .++....+.|++++..
T Consensus 55 ~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 55 FANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 4577889999985 5666777899999864
No 452
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=45.67 E-value=3.7e+02 Score=27.95 Aligned_cols=28 Identities=11% Similarity=0.035 Sum_probs=23.1
Q ss_pred CcEEEEEeCCCcEEEEEcCCCceEEEec
Q 016769 319 SKIAATAGWDRRVRIYNYRKGSALAILK 346 (383)
Q Consensus 319 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 346 (383)
+..|+.++.|+++.-.|.++|+....+.
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg 287 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTGKLCEDFG 287 (764)
T ss_pred CCEEEEecCCCeEEEEECCCCCEEEEec
Confidence 3467778899999999999999887653
No 453
>PRK13684 Ycf48-like protein; Provisional
Probab=45.47 E-value=1.4e+02 Score=27.31 Aligned_cols=63 Identities=16% Similarity=0.184 Sum_probs=38.0
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEcCCC-ceEEEe-cccccceeEEEEeCCCCEEEEEeCCCcE
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKG-SALAIL-KYHHATCNAVSFSSDCKLMASASEDSTV 373 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~-~~~~~~-~~h~~~v~~v~~spd~~~las~s~d~~i 373 (383)
..+..+.+.|++.+++ .+..|.+.. ..+.+ +.-... ..-...+.++++.|+++.++.|. .|.+
T Consensus 173 g~~~~i~~~~~g~~v~-~g~~G~i~~-s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~-~G~~ 237 (334)
T PRK13684 173 GVVRNLRRSPDGKYVA-VSSRGNFYS-TWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLAR-GGQI 237 (334)
T ss_pred ceEEEEEECCCCeEEE-EeCCceEEE-EcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEec-CCEE
Confidence 4577888999887665 455676543 22222 222222 22345788999999988766553 4554
No 454
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=45.15 E-value=1.9e+02 Score=24.52 Aligned_cols=50 Identities=14% Similarity=0.237 Sum_probs=29.0
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCceEEEe------------cccccceeEEEEeCCC-CEEEEE
Q 016769 318 DSKIAATAGWDRRVRIYNYRKGSALAIL------------KYHHATCNAVSFSSDC-KLMASA 367 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~------------~~h~~~v~~v~~spd~-~~las~ 367 (383)
+|...|--=.+.+|...|.++|+....+ ..|.+-.+.+|+-|++ +++++|
T Consensus 185 dG~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 185 DGELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred ccEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 3433343334445555566666554322 2345567889999987 577777
No 455
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=43.33 E-value=56 Score=23.13 Aligned_cols=30 Identities=27% Similarity=0.411 Sum_probs=22.6
Q ss_pred CeEEEEECCCCcEEEEEe-CCCcEEEEEcCC
Q 016769 309 GISGTSIRPDSKIAATAG-WDRRVRIYNYRK 338 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~-~dg~i~iwd~~~ 338 (383)
..+++.++|++++|..++ ..++|++|...+
T Consensus 55 ~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 55 FANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred CCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 467889999988765554 678999988753
No 456
>PRK10115 protease 2; Provisional
Probab=42.88 E-value=3.9e+02 Score=27.39 Aligned_cols=111 Identities=10% Similarity=-0.066 Sum_probs=55.5
Q ss_pred CeEEEEEeCCCCceEEE-Ec----CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC------CcE
Q 016769 263 PVLCLSIDESCNGGISG-GA----DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD------RRV 331 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~-~~----d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d------g~i 331 (383)
.+..+.++++++.++.+ .. ...|++-|+... ..+. ..+. ..-..++|.+|++.|+-+..+ ..|
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg--~~l~-~~i~---~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v 201 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETG--NWYP-ELLD---NVEPSFVWANDSWTFYYVRKHPVTLLPYQV 201 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCC--CCCC-cccc---CcceEEEEeeCCCEEEEEEecCCCCCCCEE
Confidence 34456667777755432 11 223556666532 1111 1111 111458899998765544432 367
Q ss_pred EEEEcCCC--ceEEEeccccccee-EEEEeCCCCEEEEEeCC---CcEEEEeCC
Q 016769 332 RIYNYRKG--SALAILKYHHATCN-AVSFSSDCKLMASASED---STVALWELY 379 (383)
Q Consensus 332 ~iwd~~~~--~~~~~~~~h~~~v~-~v~~spd~~~las~s~d---~~i~~w~~~ 379 (383)
+.+++.++ +....+........ .+..+.|+++++..+.. +.+.+++..
T Consensus 202 ~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~ 255 (686)
T PRK10115 202 WRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE 255 (686)
T ss_pred EEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECc
Confidence 77788776 33333432222233 23334488865443333 467777753
No 457
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=42.53 E-value=2.6e+02 Score=25.36 Aligned_cols=59 Identities=17% Similarity=0.305 Sum_probs=37.5
Q ss_pred eEEEEECCCCcEEEEEeCC------CcEEEEEcCCCceEEEe---c------------ccccceeEEEEeCCCCEEEEEe
Q 016769 310 ISGTSIRPDSKIAATAGWD------RRVRIYNYRKGSALAIL---K------------YHHATCNAVSFSSDCKLMASAS 368 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~d------g~i~iwd~~~~~~~~~~---~------------~h~~~v~~v~~spd~~~las~s 368 (383)
.-++++.+++.++++.=.+ -.|+.++.. |+....+ . ....-.-+++++|||+.|.++.
T Consensus 87 ~Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~ 165 (326)
T PF13449_consen 87 PEGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAM 165 (326)
T ss_pred hhHeEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEE
Confidence 3467777788888766556 677777765 5443322 1 1223568899999999655544
Q ss_pred C
Q 016769 369 E 369 (383)
Q Consensus 369 ~ 369 (383)
+
T Consensus 166 E 166 (326)
T PF13449_consen 166 E 166 (326)
T ss_pred C
Confidence 3
No 458
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=42.03 E-value=1.9e+02 Score=29.92 Aligned_cols=67 Identities=13% Similarity=0.001 Sum_probs=49.7
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe----c-----------c----cccceeEEEEeCCCCEEEEEe
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL----K-----------Y----HHATCNAVSFSSDCKLMASAS 368 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~-----------~----h~~~v~~v~~spd~~~las~s 368 (383)
..|.++....-+.+++.+-.||+|.++|..+.+.+... . | ....+..++|||.+-.++.-.
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~ 339 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQID 339 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEe
Confidence 45777777777889999999999999999776443222 0 0 111345688999999999999
Q ss_pred CCCcEE
Q 016769 369 EDSTVA 374 (383)
Q Consensus 369 ~d~~i~ 374 (383)
.|+.+.
T Consensus 340 ~~~~~~ 345 (753)
T PF11635_consen 340 EDGKTK 345 (753)
T ss_pred cCCCce
Confidence 999876
No 459
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=40.38 E-value=6.6 Score=20.04 Aligned_cols=8 Identities=50% Similarity=0.854 Sum_probs=5.9
Q ss_pred EEeCCCCE
Q 016769 356 SFSSDCKL 363 (383)
Q Consensus 356 ~~spd~~~ 363 (383)
.|||+|++
T Consensus 7 ~FSp~Grl 14 (23)
T PF10584_consen 7 TFSPDGRL 14 (23)
T ss_dssp SBBTTSSB
T ss_pred eECCCCeE
Confidence 37888875
No 460
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=39.26 E-value=3.3e+02 Score=25.52 Aligned_cols=94 Identities=16% Similarity=0.142 Sum_probs=44.6
Q ss_pred eCCCCce-EEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccc
Q 016769 270 DESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH 348 (383)
Q Consensus 270 ~~~~~~~-~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h 348 (383)
..+++.+ +.+..|+.-.+|-++-.++...+..... .....+..++|+.+.++=...+++++-.|+.+.+....+.-.
T Consensus 44 t~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~--g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p 121 (386)
T PF14583_consen 44 TDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGP--GDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVP 121 (386)
T ss_dssp -TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS---B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--
T ss_pred CCCCCEEEEEeccCCCcceEEEEcccCEEEECccCC--CCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECC
Confidence 3344433 4455577766665554444333322211 111224566788887654556678889999998765555545
Q ss_pred ccceeEEEE--eCCCCEEE
Q 016769 349 HATCNAVSF--SSDCKLMA 365 (383)
Q Consensus 349 ~~~v~~v~~--spd~~~la 365 (383)
...+-...| +.|+..++
T Consensus 122 ~~~~g~gt~v~n~d~t~~~ 140 (386)
T PF14583_consen 122 DDWKGYGTWVANSDCTKLV 140 (386)
T ss_dssp TTEEEEEEEEE-TTSSEEE
T ss_pred cccccccceeeCCCccEEE
Confidence 555544555 34566554
No 461
>KOG4659 consensus Uncharacterized conserved protein (Rhs family) [Function unknown]
Probab=38.50 E-value=2.5e+02 Score=30.80 Aligned_cols=63 Identities=16% Similarity=0.162 Sum_probs=36.6
Q ss_pred EEEEECCCCcEEEEEe------------CCCcEEEEEcCC---------------CceEEEecccccceeEEEEeCCCCE
Q 016769 311 SGTSIRPDSKIAATAG------------WDRRVRIYNYRK---------------GSALAILKYHHATCNAVSFSSDCKL 363 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~------------~dg~i~iwd~~~---------------~~~~~~~~~h~~~v~~v~~spd~~~ 363 (383)
.+++++++|-..++=+ .||+|.++--.. ++-...-++|-+.+.++|.+|||..
T Consensus 596 r~Iavg~~G~lyvaEsD~rriNrvr~~~tdg~i~ilaGa~S~C~C~~~~~cdcfs~~~~~At~A~lnsp~alaVsPdg~v 675 (1899)
T KOG4659|consen 596 RDIAVGTDGALYVAESDGRRINRVRKLSTDGTISILAGAKSPCSCDVAACCDCFSLRDVAATQAKLNSPYALAVSPDGDV 675 (1899)
T ss_pred hceeecCCceEEEEeccchhhhheEEeccCceEEEecCCCCCCCcccccCCccccccchhhhccccCCcceEEECCCCcE
Confidence 5678888886555443 355555552211 1112223456677888999999987
Q ss_pred EEEEeCCCcE
Q 016769 364 MASASEDSTV 373 (383)
Q Consensus 364 las~s~d~~i 373 (383)
.++-+.+-.|
T Consensus 676 ~IAD~gN~rI 685 (1899)
T KOG4659|consen 676 IIADSGNSRI 685 (1899)
T ss_pred EEecCCchhh
Confidence 6655544333
No 462
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.51 E-value=3.1e+02 Score=24.65 Aligned_cols=115 Identities=9% Similarity=0.102 Sum_probs=71.0
Q ss_pred ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCc
Q 016769 261 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS 340 (383)
Q Consensus 261 ~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~ 340 (383)
...+..++|+++.+.+++......-.+| +.. ++..+..-.+.. -...-.+.+.-+++|+++-=.++++.++.++...
T Consensus 85 ~~nvS~LTynp~~rtLFav~n~p~~iVE-lt~-~GdlirtiPL~g-~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 85 TANVSSLTYNPDTRTLFAVTNKPAAIVE-LTK-EGDLIRTIPLTG-FSDPETIEYIGGNQFVIVDERDRALYLFTVDADT 161 (316)
T ss_pred cccccceeeCCCcceEEEecCCCceEEE-Eec-CCceEEEecccc-cCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence 4458899999998888776544443333 332 222222222221 1234456777788888877788999999886553
Q ss_pred eEE-------Eecc--c-ccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 341 ALA-------ILKY--H-HATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 341 ~~~-------~~~~--h-~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
... ++.. + ..---.+||.|..+.|..+-+-.=+.||.+
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~ 209 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEV 209 (316)
T ss_pred cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEE
Confidence 221 1211 2 223567899999988888877776776654
No 463
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=36.60 E-value=1.3e+02 Score=21.39 Aligned_cols=40 Identities=10% Similarity=0.265 Sum_probs=21.3
Q ss_pred EcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEE
Q 016769 280 GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 324 (383)
Q Consensus 280 ~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s 324 (383)
..+|++..||....+-..++. .+ .-.++++++||+.+++.
T Consensus 34 ~~~GRll~ydp~t~~~~vl~~-~L----~fpNGVals~d~~~vlv 73 (89)
T PF03088_consen 34 RPTGRLLRYDPSTKETTVLLD-GL----YFPNGVALSPDESFVLV 73 (89)
T ss_dssp ---EEEEEEETTTTEEEEEEE-EE----SSEEEEEE-TTSSEEEE
T ss_pred CCCcCEEEEECCCCeEEEehh-CC----CccCeEEEcCCCCEEEE
Confidence 345666677765443222221 12 24789999999996554
No 464
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=36.57 E-value=1.7e+02 Score=25.45 Aligned_cols=60 Identities=15% Similarity=0.223 Sum_probs=36.6
Q ss_pred EEEEECCCCcEEEEEeC---CCcEEEEEcCC----CceEE---EecccccceeEEEEeCCCCEEEEEeCCC
Q 016769 311 SGTSIRPDSKIAATAGW---DRRVRIYNYRK----GSALA---ILKYHHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~---dg~i~iwd~~~----~~~~~---~~~~h~~~v~~v~~spd~~~las~s~d~ 371 (383)
.+=++-|||+.+.+|+. .+.+|+|+... ..-.. .+ ...++=-++..-|||+.|+.|+.+.
T Consensus 70 Sgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m-~~~RWYpT~~~L~DG~vlIvGG~~~ 139 (243)
T PF07250_consen 70 SGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDM-QSGRWYPTATTLPDGRVLIVGGSNN 139 (243)
T ss_pred cCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccc-cCCCccccceECCCCCEEEEeCcCC
Confidence 34457799999998885 34688888643 11111 11 1233333444568999888888774
No 465
>PHA03098 kelch-like protein; Provisional
Probab=35.94 E-value=4.3e+02 Score=25.88 Aligned_cols=22 Identities=14% Similarity=0.306 Sum_probs=14.7
Q ss_pred CCcEEEEEeCC------CcEEEEEcCCC
Q 016769 318 DSKIAATAGWD------RRVRIYNYRKG 339 (383)
Q Consensus 318 ~~~~l~s~~~d------g~i~iwd~~~~ 339 (383)
+++.++.||.+ +.+..||..+.
T Consensus 389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~ 416 (534)
T PHA03098 389 NNLIYVIGGISKNDELLKTVECFSLNTN 416 (534)
T ss_pred CCEEEEECCcCCCCcccceEEEEeCCCC
Confidence 56777777742 45788888654
No 466
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=34.13 E-value=1e+02 Score=18.32 Aligned_cols=30 Identities=13% Similarity=0.204 Sum_probs=20.2
Q ss_pred eeEEEEeCCCCEEEEEeCCCcEEEEeCCCCCC
Q 016769 352 CNAVSFSSDCKLMASASEDSTVALWELYPPHA 383 (383)
Q Consensus 352 v~~v~~spd~~~las~s~d~~i~~w~~~~~~~ 383 (383)
...+... |.++-.+..++-+.|.|+++|.+
T Consensus 4 a~~v~v~--g~yaYva~~~~Gl~IvDISnPs~ 33 (42)
T PF08309_consen 4 ARDVAVS--GNYAYVADGNNGLVIVDISNPSN 33 (42)
T ss_pred EEEEEEE--CCEEEEEeCCCCEEEEECCCCCC
Confidence 3445554 45655566667799999998864
No 467
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=33.73 E-value=3.2e+02 Score=24.00 Aligned_cols=54 Identities=24% Similarity=0.295 Sum_probs=30.0
Q ss_pred ceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEE----e-CCCCceEEEEcCCcEE
Q 016769 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSI----D-ESCNGGISGGADQKIV 286 (383)
Q Consensus 230 ~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~----~-~~~~~~~s~~~d~~i~ 286 (383)
...++.|.++|.|.|.|-... ..+..++...-|+ .+.. + -++ .++.++.||.|.
T Consensus 195 ~scLViGTE~~~i~iLd~~af-~il~~~~lpsvPv-~i~~~G~~devdy-RI~Va~Rdg~iy 253 (257)
T PF14779_consen 195 VSCLVIGTESGEIYILDPQAF-TILKQVQLPSVPV-FISVSGQYDEVDY-RIVVACRDGKIY 253 (257)
T ss_pred cceEEEEecCCeEEEECchhh-eeEEEEecCCCce-EEEEEeeeeccce-EEEEEeCCCEEE
Confidence 346889999999999996642 2333343333333 2222 2 221 345556666554
No 468
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.63 E-value=3.5e+02 Score=24.23 Aligned_cols=54 Identities=11% Similarity=0.039 Sum_probs=34.3
Q ss_pred EeCCCCceEEEEc-----CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE
Q 016769 269 IDESCNGGISGGA-----DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 269 ~~~~~~~~~s~~~-----d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
|++++..|+..-. -|.|-+||.+.. ....-+...+.-+...+.+.+||+.++.+
T Consensus 121 fs~dG~~LYATEndfd~~rGViGvYd~r~~---fqrvgE~~t~GiGpHev~lm~DGrtlvva 179 (366)
T COG3490 121 FSPDGRLLYATENDFDPNRGVIGVYDAREG---FQRVGEFSTHGIGPHEVTLMADGRTLVVA 179 (366)
T ss_pred cCCCCcEEEeecCCCCCCCceEEEEecccc---cceecccccCCcCcceeEEecCCcEEEEe
Confidence 5777777654322 367889987632 11122344444456778899999988866
No 469
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=33.49 E-value=3.5e+02 Score=24.12 Aligned_cols=80 Identities=15% Similarity=0.189 Sum_probs=46.0
Q ss_pred cEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe------CCCcEEEEEcCCCceEEEecc-----cccce
Q 016769 284 KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG------WDRRVRIYNYRKGSALAILKY-----HHATC 352 (383)
Q Consensus 284 ~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~-----h~~~v 352 (383)
.|++||.+..+... ....-.+.|+.+.|..+.+.+++|. ....+..||..+..- ..+.+ -..+|
T Consensus 17 ~lC~yd~~~~qW~~----~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~~ipgpv 91 (281)
T PF12768_consen 17 GLCLYDTDNSQWSS----PGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSNSIPGPV 91 (281)
T ss_pred EEEEEECCCCEeec----CCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcccccCCCcE
Confidence 37888876543211 1111235688899886777777665 466788899876542 23322 24677
Q ss_pred eEEEEeC-CCC-EEEEEe
Q 016769 353 NAVSFSS-DCK-LMASAS 368 (383)
Q Consensus 353 ~~v~~sp-d~~-~las~s 368 (383)
..+.+.. |+. +.+.|.
T Consensus 92 ~a~~~~~~d~~~~~~aG~ 109 (281)
T PF12768_consen 92 TALTFISNDGSNFWVAGR 109 (281)
T ss_pred EEEEeeccCCceEEEece
Confidence 7777632 333 444443
No 470
>PHA02790 Kelch-like protein; Provisional
Probab=33.11 E-value=4.6e+02 Score=25.39 Aligned_cols=22 Identities=9% Similarity=0.067 Sum_probs=14.9
Q ss_pred CCcEEEEEeCCC---cEEEEEcCCC
Q 016769 318 DSKIAATAGWDR---RVRIYNYRKG 339 (383)
Q Consensus 318 ~~~~l~s~~~dg---~i~iwd~~~~ 339 (383)
+++..+.||.++ ++..||..+.
T Consensus 362 ~g~IYviGG~~~~~~~ve~ydp~~~ 386 (480)
T PHA02790 362 NNVIYVIGGHSETDTTTEYLLPNHD 386 (480)
T ss_pred CCEEEEecCcCCCCccEEEEeCCCC
Confidence 677778887654 4667887654
No 471
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=32.54 E-value=2.6e+02 Score=26.91 Aligned_cols=62 Identities=11% Similarity=0.138 Sum_probs=38.5
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccc--ccccc-c--ccccceeeeeeecCCC
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT--VSSSW-V--HSAAHGIVSVATGPSI 74 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~--~~~~~-~--~~~~~~~~~~~~~~~~ 74 (383)
++-..-..=+.|+|.|||++|++--..|+|++++..++.. +..+. . .....+...+++.|+.
T Consensus 24 ~va~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 24 VLLSGLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred EEECCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 3443445557899999998888766579999998654322 11111 1 1123467788888764
No 472
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=32.26 E-value=3e+02 Score=24.76 Aligned_cols=58 Identities=10% Similarity=0.111 Sum_probs=39.1
Q ss_pred CCcEEEEEeCCCcEEEEEcCC--CceEEEecccccceeEEEEeCCCCEEEEEe-CCCcEEEEeC
Q 016769 318 DSKIAATAGWDRRVRIYNYRK--GSALAILKYHHATCNAVSFSSDCKLMASAS-EDSTVALWEL 378 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~v~~spd~~~las~s-~d~~i~~w~~ 378 (383)
++++++.|+.+| +.+.|+.. .+.... .+...|.++...+.-+.|++=+ ....++.+++
T Consensus 12 ~~~~lL~GTe~G-ly~~~~~~~~~~~~kl--~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L 72 (302)
T smart00036 12 DGKWLLVGTEEG-LYVLNISDQPGTLEKL--IGRRSVTQIWVLEENNVLLMISGKKPQLYSHPL 72 (302)
T ss_pred CCcEEEEEeCCc-eEEEEcccCCCCeEEe--cCcCceEEEEEEhhhCEEEEEeCCcceEEEEEH
Confidence 336888899998 55566654 233333 3577899999988877666544 3344899887
No 473
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=31.93 E-value=98 Score=31.41 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=29.6
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR 51 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~ 51 (383)
.+.+++|.-+|.|+-+++++.||++++++....+
T Consensus 14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~ 47 (1636)
T KOG3616|consen 14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRR 47 (1636)
T ss_pred cceeeeeeecCCCceEEEEecCCcEEEEeecccc
Confidence 4667889999999999999999999999986543
No 474
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=31.73 E-value=1.7e+02 Score=29.37 Aligned_cols=59 Identities=20% Similarity=0.246 Sum_probs=34.9
Q ss_pred eEEEEECCCCcEEEEEe-----CCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCC
Q 016769 310 ISGTSIRPDSKIAATAG-----WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED 370 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d 370 (383)
+..++.+||++++|-+- ..=++++-|+.+++.+.. .-.+...+++|.+|++.|.....|
T Consensus 131 Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d--~i~~~~~~~~Wa~d~~~lfYt~~d 194 (682)
T COG1770 131 LGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPD--EITNTSGSFAWAADGKTLFYTRLD 194 (682)
T ss_pred eeeeeeCCCCceEEEEEecccccEEEEEEEecccccccch--hhcccccceEEecCCCeEEEEEEc
Confidence 44566677777665432 223677777777765532 223345566788888766655544
No 475
>KOG1520 consensus Predicted alkaloid synthase/Surface mucin Hemomucin [General function prediction only]
Probab=31.64 E-value=4.3e+02 Score=24.61 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=48.6
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCC---CCeEEEEECCCCcE-----------------E
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER---PGISGTSIRPDSKI-----------------A 322 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~---~~i~~~~~~p~~~~-----------------l 322 (383)
.-..++|+..+..++.+ |...-+|.++...+....... +... .-.+.+.+.++|.. +
T Consensus 116 RPLGl~f~~~ggdL~Va--DAYlGL~~V~p~g~~a~~l~~-~~~G~~~kf~N~ldI~~~g~vyFTDSSsk~~~rd~~~a~ 192 (376)
T KOG1520|consen 116 RPLGIRFDKKGGDLYVA--DAYLGLLKVGPEGGLAELLAD-EAEGKPFKFLNDLDIDPEGVVYFTDSSSKYDRRDFVFAA 192 (376)
T ss_pred CcceEEeccCCCeEEEE--ecceeeEEECCCCCcceeccc-cccCeeeeecCceeEcCCCeEEEeccccccchhheEEee
Confidence 34567887776555554 555666666544333111000 0000 00233444443332 2
Q ss_pred EEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEE
Q 016769 323 ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASA 367 (383)
Q Consensus 323 ~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~ 367 (383)
.++..+|++.-||..+... +.+..--.-.+.++.|||+.+++.+
T Consensus 193 l~g~~~GRl~~YD~~tK~~-~VLld~L~F~NGlaLS~d~sfvl~~ 236 (376)
T KOG1520|consen 193 LEGDPTGRLFRYDPSTKVT-KVLLDGLYFPNGLALSPDGSFVLVA 236 (376)
T ss_pred ecCCCccceEEecCcccch-hhhhhcccccccccCCCCCCEEEEE
Confidence 2333455666666644332 1222222345778999999976553
No 476
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=31.13 E-value=3.9e+02 Score=27.82 Aligned_cols=73 Identities=10% Similarity=0.114 Sum_probs=47.2
Q ss_pred CCeEEEEECCCC-cEEEEEeCCCcEEEEEcCCC-----ceEEEecccccc----------eeEEEEeCCCCEEEEEeCCC
Q 016769 308 PGISGTSIRPDS-KIAATAGWDRRVRIYNYRKG-----SALAILKYHHAT----------CNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 308 ~~i~~~~~~p~~-~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~h~~~----------v~~v~~spd~~~las~s~d~ 371 (383)
.....++|+|.. +.||.....|...|||+... ..+.....+.+. -..|.|.++-+.|+.+++.
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~- 224 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRS- 224 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCC-
Confidence 456789999854 58999999999999999211 111111111222 2367788887777777665
Q ss_pred cEEEEeCCCC
Q 016769 372 TVALWELYPP 381 (383)
Q Consensus 372 ~i~~w~~~~~ 381 (383)
.+.++|+..+
T Consensus 225 ~l~~~d~~~~ 234 (765)
T PF10214_consen 225 KLMLIDFESN 234 (765)
T ss_pred ceEEEECCCC
Confidence 4677787643
No 477
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=30.66 E-value=3.6e+02 Score=26.57 Aligned_cols=30 Identities=10% Similarity=0.182 Sum_probs=24.4
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCceEEEecc
Q 016769 318 DSKIAATAGWDRRVRIYNYRKGSALAILKY 347 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 347 (383)
.+..++.++.||.++.+|.++|+.+...+-
T Consensus 471 ~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 471 AGDLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred CCcEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 344666788899999999999999987654
No 478
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.45 E-value=1.6e+02 Score=29.88 Aligned_cols=50 Identities=24% Similarity=0.448 Sum_probs=36.3
Q ss_pred CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
-..|+||+. +|..+..+--....+....|+-+ ..|+.-..||++++|++.
T Consensus 63 ~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~-eeLI~v~k~g~v~Vy~~~ 112 (829)
T KOG2280|consen 63 RPYIRIFNI-SGQLLGRILWKHGELIGMGWSDD-EELICVQKDGTVHVYGLL 112 (829)
T ss_pred ceeEEEEec-cccchHHHHhcCCCeeeecccCC-ceEEEEeccceEEEeecc
Confidence 456888888 56666544332336778899854 678889999999999985
No 479
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=28.16 E-value=4.8e+02 Score=24.05 Aligned_cols=31 Identities=16% Similarity=0.259 Sum_probs=23.8
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCceEEEecccc
Q 016769 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~ 349 (383)
+|+ +..++.++.++.+|..+|+.........
T Consensus 111 ~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~ 141 (370)
T COG1520 111 DGK-IYVGSWDGKLYALDASTGTLVWSRNVGG 141 (370)
T ss_pred CCe-EEEecccceEEEEECCCCcEEEEEecCC
Confidence 665 6668899988889998898887665444
No 480
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=27.46 E-value=4.7e+02 Score=23.74 Aligned_cols=53 Identities=17% Similarity=0.236 Sum_probs=29.2
Q ss_pred CCCcEEEEEeCC----------------------CcEEEEEcCCCce--EEEecccccceeEEEEeCCCCEEEEEeCCC
Q 016769 317 PDSKIAATAGWD----------------------RRVRIYNYRKGSA--LAILKYHHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 317 p~~~~l~s~~~d----------------------g~i~iwd~~~~~~--~~~~~~h~~~v~~v~~spd~~~las~s~d~ 371 (383)
.+++.++.|+.+ ..+.+||.++.+= +..+. .. .-...+..-++++++.|+.+.
T Consensus 256 ~~~~Iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~lp-~~-~~~~~~~~~~~~iyv~GG~~~ 332 (346)
T TIGR03547 256 SNGVLLVAGGANFPGAQENYKNGKLYAHEGLIKAWSSEVYALDNGKWSKVGKLP-QG-LAYGVSVSWNNGVLLIGGENS 332 (346)
T ss_pred ECCEEEEeecCCCCCchhhhhcCCccccCCCCceeEeeEEEecCCcccccCCCC-CC-ceeeEEEEcCCEEEEEeccCC
Confidence 467777888754 1466788765431 11111 11 112223345788889888764
No 481
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=27.21 E-value=2e+02 Score=30.20 Aligned_cols=50 Identities=20% Similarity=0.213 Sum_probs=33.2
Q ss_pred CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEE-EeCCC-----cEEEEeC
Q 016769 329 RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMAS-ASEDS-----TVALWEL 378 (383)
Q Consensus 329 g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las-~s~d~-----~i~~w~~ 378 (383)
+++.+-|.+-..+...-..+..+|.+=+|||||++||. .|.++ .|.+-||
T Consensus 329 ~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L 384 (912)
T TIGR02171 329 GNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNL 384 (912)
T ss_pred CeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEeh
Confidence 46777777554433320236778888899999999998 66665 3555555
No 482
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=27.14 E-value=6.2e+02 Score=24.96 Aligned_cols=26 Identities=15% Similarity=0.093 Sum_probs=21.4
Q ss_pred EEEEEeCCCcEEEEEcCCCceEEEec
Q 016769 321 IAATAGWDRRVRIYNYRKGSALAILK 346 (383)
Q Consensus 321 ~l~s~~~dg~i~iwd~~~~~~~~~~~ 346 (383)
.++.++.|+.+.-+|..+|+.+....
T Consensus 122 ~v~v~t~dg~l~ALDa~TGk~~W~~~ 147 (527)
T TIGR03075 122 KVFFGTLDARLVALDAKTGKVVWSKK 147 (527)
T ss_pred EEEEEcCCCEEEEEECCCCCEEeecc
Confidence 46667889999999999999987654
No 483
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=27.01 E-value=5.3e+02 Score=24.18 Aligned_cols=164 Identities=15% Similarity=0.200 Sum_probs=0.0
Q ss_pred eeeccCCc---ceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 173 MAVAGEQL---SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 173 ~~~~g~~~---~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
+++++..+ ++|++|.+.......+........-.......+++|+.- +...+...++....+|.+..|.|..
T Consensus 116 lavas~R~~g~n~l~~f~id~~~g~L~~v~~~~~p~~~~~~e~yGlcly~-----~~~~g~~ya~v~~k~G~~~Qy~L~~ 190 (381)
T PF02333_consen 116 LAVASDRSDGRNSLRLFRIDPDTGELTDVTDPAAPIATDLSEPYGLCLYR-----SPSTGALYAFVNGKDGRVEQYELTD 190 (381)
T ss_dssp EEEEEE-CCCT-EEEEEEEETTTTEEEE-CBTTC-EE-SSSSEEEEEEEE------TTT--EEEEEEETTSEEEEEEEEE
T ss_pred EEEEecCcCCCCeEEEEEecCCCCcceEcCCCCcccccccccceeeEEee-----cCCCCcEEEEEecCCceEEEEEEEe
Q ss_pred CCCc------eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEcc---CCCCeeEEeeeeecCCCCeEEEEE----C
Q 016769 250 PGIP------LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD---HSTGSCVIKKEINLERPGISGTSI----R 316 (383)
Q Consensus 250 ~~~~------~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~---~~~~~~~~~~~~~~~~~~i~~~~~----~ 316 (383)
...- ++.++... .+..+.+|.....++.+-.+.-|-.|+.+ ...+..............+-++++ .
T Consensus 191 ~~~g~v~~~lVR~f~~~s-Q~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~ 269 (381)
T PF02333_consen 191 DGDGKVSATLVREFKVGS-QPEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSD 269 (381)
T ss_dssp -TTSSEEEEEEEEEE-SS--EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CC
T ss_pred CCCCcEeeEEEEEecCCC-cceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCC
Q ss_pred CCCcEEEEEeCCCcEEEEEcCCCceE
Q 016769 317 PDSKIAATAGWDRRVRIYNYRKGSAL 342 (383)
Q Consensus 317 p~~~~l~s~~~dg~i~iwd~~~~~~~ 342 (383)
-.|-.|+|.-.+++..+||......+
T Consensus 270 g~gYLivSsQG~~sf~Vy~r~~~~~~ 295 (381)
T PF02333_consen 270 GKGYLIVSSQGDNSFAVYDREGPNAY 295 (381)
T ss_dssp C-EEEEEEEGGGTEEEEEESSTT--E
T ss_pred CCeEEEEEcCCCCeEEEEecCCCCcc
No 484
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=26.46 E-value=4.9e+02 Score=23.61 Aligned_cols=72 Identities=17% Similarity=0.252 Sum_probs=42.9
Q ss_pred CCeEEEEECCCCcEEEEEeC-----CC--c-------EEEE--EcCC-CceE----EEecc-----cccceeEEEEeCCC
Q 016769 308 PGISGTSIRPDSKIAATAGW-----DR--R-------VRIY--NYRK-GSAL----AILKY-----HHATCNAVSFSSDC 361 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~-----dg--~-------i~iw--d~~~-~~~~----~~~~~-----h~~~v~~v~~spd~ 361 (383)
.+.-+++++|+|+.|.++.. |+ . ++++ |..+ ++.. +.+.. ....+..+.+-||+
T Consensus 147 ~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~ 226 (326)
T PF13449_consen 147 RGFEGLAVSPDGRTLFAAMESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDG 226 (326)
T ss_pred CCeEEEEECCCCCEEEEEECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCC
Confidence 46789999999996555543 22 1 4554 4444 2222 22221 34567888888999
Q ss_pred CEEEEEe-----CCCcEEEEeCC
Q 016769 362 KLMASAS-----EDSTVALWELY 379 (383)
Q Consensus 362 ~~las~s-----~d~~i~~w~~~ 379 (383)
++|+--- ....++|+.+.
T Consensus 227 ~lLvLER~~~~~~~~~~ri~~v~ 249 (326)
T PF13449_consen 227 RLLVLERDFSPGTGNYKRIYRVD 249 (326)
T ss_pred cEEEEEccCCCCccceEEEEEEE
Confidence 8776322 35567776554
No 485
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=25.69 E-value=8.4e+02 Score=26.06 Aligned_cols=100 Identities=11% Similarity=0.050 Sum_probs=60.9
Q ss_pred EEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEE
Q 016769 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 235 sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~ 314 (383)
.++-...|++|++.+.+. ++....|..++..+...-.++.++.|.--+++.+-..+...+..... .-.++....+.+.
T Consensus 843 lA~In~~vrLye~t~~~e-Lr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~ev-ArD~~p~Wmtave 920 (1096)
T KOG1897|consen 843 LAGINQSVRLYEWTTERE-LRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEV-ARDYNPNWMTAVE 920 (1096)
T ss_pred EEecCcEEEEEEccccce-ehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEe-ehhhCccceeeEE
Confidence 355678999999987533 44445677788888887777888888777776654444333322211 1122333455666
Q ss_pred ECCCCcEEEEEeCCCcEEEEEcC
Q 016769 315 IRPDSKIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 315 ~~p~~~~l~s~~~dg~i~iwd~~ 337 (383)
+-.+..| +-+-.+|.+.+-..+
T Consensus 921 il~~d~y-lgae~~gNlf~v~~d 942 (1096)
T KOG1897|consen 921 ILDDDTY-LGAENSGNLFTVRKD 942 (1096)
T ss_pred EecCceE-EeecccccEEEEEec
Confidence 6544444 446678888776554
No 486
>KOG1896 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit) [RNA processing and modification]
Probab=25.08 E-value=9.4e+02 Score=26.42 Aligned_cols=134 Identities=17% Similarity=0.250 Sum_probs=70.6
Q ss_pred CCcEEEEeCCC----CCCceeeee-------ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCC
Q 016769 239 DGSILVWDIRN----PGIPLTAMK-------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 307 (383)
Q Consensus 239 dg~i~~wdl~~----~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~ 307 (383)
.|.+.|+|+-. ++.|....+ .-.++|..++- - ++.+..+....|.+|+++..+...-... ..
T Consensus 1064 RGr~hi~diIeVVPepgkP~t~~KlKel~~eE~KGtVsavce-V--~G~l~~~~GqKI~v~~l~r~~~ligVaF-iD--- 1136 (1366)
T KOG1896|consen 1064 RGRIHIFDIIEVVPEPGKPFTKNKLKELYIEEQKGTVSAVCE-V--RGHLLSSQGQKIIVRKLDRDSELIGVAF-ID--- 1136 (1366)
T ss_pred cccEEEEEEEEecCCCCCCcccceeeeeehhhcccceEEEEE-e--ccEEEEccCcEEEEEEeccCCcceeeEE-ec---
Confidence 46789999742 333322111 12234444332 1 2234455777899999954332110000 00
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEcC-CCceEEEecc--cccceeEEEEeCCCC--EEEEEeCCCcEEEEeCC
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYR-KGSALAILKY--HHATCNAVSFSSDCK--LMASASEDSTVALWELY 379 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--h~~~v~~v~~spd~~--~las~s~d~~i~~w~~~ 379 (383)
-.+.-....--.++|..|.--+.|.+.-.. .+..+..+.. ....+.++.|--||. .++.+.+|++|+++-..
T Consensus 1137 ~~~yv~s~~~vknlIl~gDV~ksisfl~fqeep~rlsL~srd~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y~ 1213 (1366)
T KOG1896|consen 1137 LPLYVHSMKVVKNLILAGDVMKSISFLGFQEEPYRLSLLSRDFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMYA 1213 (1366)
T ss_pred cceeEEehhhhhhheehhhhhhceEEEEEccCceEEEEeecCCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEeC
Confidence 011111122233456666656666665542 2333433332 233678888877776 78999999999999875
No 487
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=24.65 E-value=5.3e+02 Score=23.39 Aligned_cols=51 Identities=18% Similarity=0.217 Sum_probs=34.9
Q ss_pred CeEEEEECC------CCcEEEEEeCCCcEEEEEcCCCceEEEeccccc------ceeEEEEeC
Q 016769 309 GISGTSIRP------DSKIAATAGWDRRVRIYNYRKGSALAILKYHHA------TCNAVSFSS 359 (383)
Q Consensus 309 ~i~~~~~~p------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~------~v~~v~~sp 359 (383)
....++.-| .+..|+--=.||+|..||..+++.+..++.-.. -.+.++|-.
T Consensus 245 aPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 245 APWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred CCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 345565533 456666555799999999999998877764332 357778854
No 488
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=24.38 E-value=4.4e+02 Score=22.38 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=31.3
Q ss_pred EEEEeCCCcEEEEeCCCCCC-ceeeeeccccCeEEEEEeCCCCceEEE
Q 016769 233 VLAGYEDGSILVWDIRNPGI-PLTAMKVHLEPVLCLSIDESCNGGISG 279 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~s~ 279 (383)
++.+.....|.+|++..... ++..+. ..+.|..+.++..|+++++-
T Consensus 31 Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTl 77 (215)
T PF14761_consen 31 LFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTL 77 (215)
T ss_pred EEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEE
Confidence 33445677899999984333 233332 34788899999999988774
No 489
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=23.79 E-value=7.1e+02 Score=24.54 Aligned_cols=78 Identities=9% Similarity=0.077 Sum_probs=48.9
Q ss_pred CCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeC--CCCEEEEEeCCC-----------c
Q 016769 306 ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS--DCKLMASASEDS-----------T 372 (383)
Q Consensus 306 ~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~sp--d~~~las~s~d~-----------~ 372 (383)
....|.++.|--+--|+++--.=-.+.+.|+..++..+.+..-+-+=.+-=+|| ++++|-.|-++. .
T Consensus 324 ~gE~IysvRF~Gd~~Y~VTFrqvDPLfviDLsdP~~P~vlGeLKIPGfS~YLHP~~e~~LlGiG~~~~~~~~~~~~~GlK 403 (521)
T PF09826_consen 324 PGERIYSVRFMGDRAYLVTFRQVDPLFVIDLSDPANPKVLGELKIPGFSDYLHPYDENHLLGIGKDTDEDEGTGWTQGLK 403 (521)
T ss_pred CCceEEEEEEeCCeEEEEEEeecCceEEEECCCCCCCceeeEEECccchhceeECCCCeEEEEcccCcccccccccceeE
Confidence 345799999998888999988877899999977554333321111112222466 333444444333 4
Q ss_pred EEEEeCCCCCC
Q 016769 373 VALWELYPPHA 383 (383)
Q Consensus 373 i~~w~~~~~~~ 383 (383)
|.+||++||.+
T Consensus 404 isLFDVSD~~~ 414 (521)
T PF09826_consen 404 ISLFDVSDPAN 414 (521)
T ss_pred EEEEecCCCCC
Confidence 67899998863
No 490
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=23.08 E-value=6.4e+02 Score=23.79 Aligned_cols=66 Identities=11% Similarity=0.008 Sum_probs=40.3
Q ss_pred CCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCc-----eEEEecc--cccceeEEEEeCCCCEEEEEeCCCcEEE
Q 016769 307 RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS-----ALAILKY--HHATCNAVSFSSDCKLMASASEDSTVAL 375 (383)
Q Consensus 307 ~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~--h~~~v~~v~~spd~~~las~s~d~~i~~ 375 (383)
...+..+.+.+++..+++ +.+|.+. +..+.++ ....... -...+.++.|.+|+..+++| .+|.+..
T Consensus 280 ~~~l~~v~~~~dg~l~l~-g~~G~l~-~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~ 352 (398)
T PLN00033 280 ARRIQNMGWRADGGLWLL-TRGGGLY-VSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLR 352 (398)
T ss_pred ccceeeeeEcCCCCEEEE-eCCceEE-EecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEE
Confidence 346788999999887765 4677764 4555554 2222211 12348889999887665554 5565544
No 491
>PHA02790 Kelch-like protein; Provisional
Probab=21.60 E-value=7.4e+02 Score=23.96 Aligned_cols=57 Identities=9% Similarity=0.043 Sum_probs=30.5
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCc--eEEEecccccceeEEEEeCCCCEEEEEeCC-----CcEEEEeCC
Q 016769 318 DSKIAATAGWDRRVRIYNYRKGS--ALAILKYHHATCNAVSFSSDCKLMASASED-----STVALWELY 379 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~v~~spd~~~las~s~d-----~~i~~w~~~ 379 (383)
+++..+.|+ .+.+||..+.+ .+..+. +...-.+++. -+|++.+.|+.+ ..|..||..
T Consensus 407 ~~~IYv~GG---~~e~ydp~~~~W~~~~~m~-~~r~~~~~~v-~~~~IYviGG~~~~~~~~~ve~Yd~~ 470 (480)
T PHA02790 407 GRRLFLVGR---NAEFYCESSNTWTLIDDPI-YPRDNPELII-VDNKLLLIGGFYRGSYIDTIEVYNNR 470 (480)
T ss_pred CCEEEEECC---ceEEecCCCCcEeEcCCCC-CCccccEEEE-ECCEEEEECCcCCCcccceEEEEECC
Confidence 566666664 46678886543 122221 2121122232 377888988865 346666653
No 492
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=21.33 E-value=7e+02 Score=24.46 Aligned_cols=99 Identities=13% Similarity=0.075 Sum_probs=55.7
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEe----CCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSID----ESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~----~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
.+.|-.|..|.-.|.|-.+.-+...+. ...+..-.|+ ....+++.++..|.|++||--.... +..+.....
T Consensus 530 tlvGlS~~svFrIDPR~~gNKi~v~es-KdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rA----KtalP~lG~ 604 (776)
T COG5167 530 TLVGLSDYSVFRIDPRARGNKIKVVES-KDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRA----KTALPGLGD 604 (776)
T ss_pred eEEeecccceEEecccccCCceeeeee-hhccccccccccccccCceEEEecCCCceeeehhhcchh----hhcCccccc
Confidence 455666666666666543322222111 1111111121 1123578889999999998422111 112333445
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~ 337 (383)
.|..+.++.+|+.+++.|.. ++.+-|+.
T Consensus 605 aIk~idvta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 605 AIKHIDVTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred ceeeeEeecCCcEEEEeecc-eEEEEecc
Confidence 68888999999998888754 67777773
No 493
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.62 E-value=9.5e+02 Score=24.81 Aligned_cols=50 Identities=16% Similarity=0.157 Sum_probs=33.2
Q ss_pred CcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccC
Q 016769 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~ 292 (383)
-.|+||++. +..+..+.....++..|.|+.+- .++.-..+|++.+|++-.
T Consensus 64 ~~I~If~~s--G~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 64 PYIRIFNIS--GQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLG 113 (829)
T ss_pred eeEEEEecc--ccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecch
Confidence 457788764 34444433333367788887653 567788999999998753
Done!