Query 016769
Match_columns 383
No_of_seqs 140 out of 1879
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 03:29:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016769.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016769hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1got_B GT-beta; complex (GTP-b 100.0 6.9E-42 2.4E-46 313.5 40.4 296 8-377 45-340 (340)
2 3iz6_a 40S ribosomal protein R 100.0 7.9E-43 2.7E-47 324.6 34.4 316 5-380 53-375 (380)
3 2pbi_B Guanine nucleotide-bind 100.0 5.6E-41 1.9E-45 309.1 40.5 303 6-377 52-354 (354)
4 1vyh_C Platelet-activating fac 100.0 1.9E-41 6.4E-46 318.5 36.8 291 9-378 99-409 (410)
5 3ow8_A WD repeat-containing pr 100.0 2.6E-40 8.8E-45 300.6 38.3 288 12-378 26-319 (321)
6 2ynn_A Coatomer subunit beta'; 100.0 9.4E-39 3.2E-43 288.0 39.2 294 9-380 4-302 (304)
7 4g56_B MGC81050 protein; prote 100.0 1.4E-38 4.8E-43 293.4 33.4 292 14-379 38-342 (357)
8 3frx_A Guanine nucleotide-bind 100.0 8.3E-38 2.9E-42 283.8 36.0 292 10-379 9-316 (319)
9 4gqb_B Methylosome protein 50; 100.0 3.3E-38 1.1E-42 289.2 33.5 290 15-379 27-330 (344)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.4E-38 2.5E-42 287.3 34.0 303 9-381 6-336 (345)
11 4ery_A WD repeat-containing pr 100.0 5E-37 1.7E-41 277.4 37.8 292 10-379 15-311 (312)
12 1nr0_A Actin interacting prote 100.0 9E-38 3.1E-42 308.2 33.3 349 9-378 181-609 (611)
13 1erj_A Transcriptional repress 100.0 2.7E-37 9.3E-42 288.6 34.1 291 15-379 61-388 (393)
14 4aow_A Guanine nucleotide-bind 100.0 1.3E-36 4.4E-41 277.2 36.6 293 10-380 30-337 (340)
15 2hes_X YDR267CP; beta-propelle 100.0 1.6E-36 5.4E-41 276.7 34.7 306 7-380 3-328 (330)
16 4h5i_A Guanine nucleotide-exch 100.0 5E-37 1.7E-41 283.9 30.0 301 18-379 14-342 (365)
17 2xzm_R RACK1; ribosome, transl 100.0 7.3E-36 2.5E-40 273.7 37.0 296 9-379 12-339 (343)
18 2pm7_B Protein transport prote 100.0 2.9E-35 9.9E-40 264.3 34.0 259 11-379 2-284 (297)
19 3zwl_B Eukaryotic translation 100.0 7.5E-35 2.6E-39 268.0 37.3 298 12-379 26-345 (369)
20 1nr0_A Actin interacting prote 100.0 1.3E-34 4.3E-39 285.7 38.0 294 7-380 48-355 (611)
21 2ymu_A WD-40 repeat protein; u 100.0 8.9E-35 3E-39 284.4 35.7 325 8-377 252-577 (577)
22 3i2n_A WD repeat-containing pr 100.0 6.3E-34 2.2E-38 261.0 35.7 317 7-382 7-355 (357)
23 3dm0_A Maltose-binding peripla 100.0 3.1E-34 1.1E-38 287.0 36.2 293 11-379 375-692 (694)
24 3ei3_B DNA damage-binding prot 100.0 4.1E-34 1.4E-38 265.7 33.8 300 8-380 63-382 (383)
25 4ggc_A P55CDC, cell division c 100.0 2.7E-33 9.4E-38 252.7 38.0 296 5-381 8-316 (318)
26 2ymu_A WD-40 repeat protein; u 100.0 7.3E-34 2.5E-38 277.9 36.5 326 9-379 7-333 (577)
27 4e54_B DNA damage-binding prot 100.0 4E-35 1.4E-39 277.5 26.6 303 10-382 111-432 (435)
28 3odt_A Protein DOA1; ubiquitin 100.0 1.8E-33 6.3E-38 253.1 35.8 294 2-380 1-296 (313)
29 1sq9_A Antiviral protein SKI8; 100.0 5.2E-34 1.8E-38 265.8 32.5 308 10-380 8-395 (397)
30 3gre_A Serine/threonine-protei 100.0 1E-34 3.6E-39 274.5 25.9 312 8-377 52-437 (437)
31 4a11_B DNA excision repair pro 100.0 3.5E-33 1.2E-37 260.5 34.8 304 9-380 34-365 (408)
32 3k26_A Polycomb protein EED; W 100.0 4.3E-34 1.5E-38 262.8 28.1 299 13-379 13-365 (366)
33 1gxr_A ESG1, transducin-like e 100.0 2.9E-32 1E-36 247.7 38.3 287 13-378 46-335 (337)
34 3bg1_A Protein SEC13 homolog; 100.0 2.8E-34 9.6E-39 260.2 24.3 257 12-379 7-292 (316)
35 2pm9_A Protein WEB1, protein t 100.0 8E-34 2.7E-38 266.1 27.3 305 16-380 65-414 (416)
36 3mmy_A MRNA export factor; mRN 100.0 2.9E-33 9.9E-38 257.3 28.9 295 6-380 27-346 (368)
37 4gga_A P55CDC, cell division c 100.0 5.7E-32 1.9E-36 254.7 37.8 279 21-380 108-395 (420)
38 1r5m_A SIR4-interacting protei 100.0 1.8E-32 6.2E-37 256.9 34.2 297 16-379 106-424 (425)
39 2pm9_A Protein WEB1, protein t 100.0 4.8E-33 1.6E-37 260.8 29.8 298 17-381 11-338 (416)
40 2ynn_A Coatomer subunit beta'; 100.0 5.8E-32 2E-36 243.6 33.9 243 63-380 14-259 (304)
41 1k8k_C P40, ARP2/3 complex 41 100.0 1.4E-32 4.9E-37 253.5 30.1 291 13-379 3-360 (372)
42 1r5m_A SIR4-interacting protei 100.0 3.7E-32 1.3E-36 254.8 33.3 299 11-379 36-360 (425)
43 3jrp_A Fusion protein of prote 100.0 4.1E-32 1.4E-36 250.7 32.0 261 9-379 2-286 (379)
44 3dwl_C Actin-related protein 2 100.0 3.6E-33 1.2E-37 258.6 23.0 295 12-378 5-377 (377)
45 3f3f_A Nucleoporin SEH1; struc 100.0 1.5E-32 5.2E-37 250.0 26.8 320 9-381 2-338 (351)
46 3v7d_B Cell division control p 100.0 2.9E-31 9.8E-36 252.8 36.6 303 7-381 110-422 (464)
47 3sfz_A APAF-1, apoptotic pepti 100.0 6.5E-32 2.2E-36 286.7 35.2 350 10-380 607-1034(1249)
48 4aez_A CDC20, WD repeat-contai 100.0 3.7E-31 1.3E-35 247.6 36.1 294 7-381 78-381 (401)
49 1vyh_C Platelet-activating fac 100.0 7.3E-32 2.5E-36 253.2 30.7 254 9-337 141-410 (410)
50 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3E-31 1E-35 251.5 35.2 325 9-380 109-442 (445)
51 2j04_B YDR362CP, TAU91; beta p 100.0 1E-32 3.4E-37 265.7 24.6 296 12-382 201-519 (524)
52 4gqb_B Methylosome protein 50; 100.0 1.8E-31 6.1E-36 244.5 31.5 253 13-340 77-333 (344)
53 1yfq_A Cell cycle arrest prote 100.0 5.4E-32 1.9E-36 246.9 27.9 287 12-377 5-321 (342)
54 3vl1_A 26S proteasome regulato 100.0 3.7E-31 1.3E-35 248.4 33.2 296 13-381 93-420 (420)
55 1p22_A F-BOX/WD-repeat protein 100.0 5.2E-31 1.8E-35 249.2 32.6 282 9-380 124-414 (435)
56 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-31 3.7E-36 274.9 28.4 353 15-381 55-606 (902)
57 3ow8_A WD repeat-containing pr 100.0 8E-31 2.7E-35 238.0 31.0 248 11-337 73-320 (321)
58 3vl1_A 26S proteasome regulato 100.0 2.1E-31 7.2E-36 250.1 27.6 283 19-381 57-366 (420)
59 1pgu_A Actin interacting prote 100.0 2.7E-31 9.4E-36 261.1 29.3 344 8-379 193-613 (615)
60 3sfz_A APAF-1, apoptotic pepti 100.0 3E-31 1E-35 281.5 30.0 360 8-380 647-1158(1249)
61 2oaj_A Protein SNI1; WD40 repe 100.0 5E-31 1.7E-35 270.0 30.3 353 13-379 146-660 (902)
62 1pgu_A Actin interacting prote 100.0 4.2E-30 1.4E-34 252.7 35.3 306 9-381 151-573 (615)
63 3v7d_B Cell division control p 100.0 3.4E-30 1.1E-34 245.4 33.3 308 8-377 152-460 (464)
64 3vu4_A KMHSV2; beta-propeller 100.0 5.6E-30 1.9E-34 235.7 32.6 283 8-379 9-335 (355)
65 3mkq_A Coatomer beta'-subunit; 100.0 8.4E-30 2.9E-34 259.0 36.9 293 9-379 4-301 (814)
66 1gxr_A ESG1, transducin-like e 100.0 1.1E-29 3.6E-34 230.8 33.4 288 16-380 7-296 (337)
67 4g56_B MGC81050 protein; prote 100.0 3.9E-30 1.3E-34 237.0 29.6 256 11-341 87-346 (357)
68 3frx_A Guanine nucleotide-bind 100.0 5.2E-30 1.8E-34 232.4 29.8 258 10-339 57-318 (319)
69 3dw8_B Serine/threonine-protei 100.0 4.7E-30 1.6E-34 242.8 29.6 328 16-378 26-444 (447)
70 2j04_B YDR362CP, TAU91; beta p 100.0 6.5E-31 2.2E-35 253.1 23.9 146 232-379 279-427 (524)
71 3jro_A Fusion protein of prote 100.0 2.2E-30 7.5E-35 261.2 26.8 260 11-380 2-285 (753)
72 1got_B GT-beta; complex (GTP-b 100.0 1.1E-28 3.7E-33 225.7 33.4 240 63-380 56-301 (340)
73 3iz6_a 40S ribosomal protein R 100.0 1.9E-29 6.5E-34 234.3 28.1 273 38-380 44-329 (380)
74 3fm0_A Protein CIAO1; WDR39,SG 100.0 2E-28 6.9E-33 224.4 30.3 261 14-345 57-342 (345)
75 2hes_X YDR267CP; beta-propelle 100.0 9.4E-29 3.2E-33 225.2 27.5 259 10-338 48-328 (330)
76 2xzm_R RACK1; ribosome, transl 100.0 6.4E-29 2.2E-33 227.5 26.3 265 10-339 68-341 (343)
77 1erj_A Transcriptional repress 100.0 3.7E-28 1.3E-32 226.7 31.8 250 19-339 124-390 (393)
78 2pbi_B Guanine nucleotide-bind 100.0 1.1E-27 3.6E-32 220.4 32.1 241 63-380 65-315 (354)
79 2xyi_A Probable histone-bindin 100.0 9.6E-28 3.3E-32 226.5 31.4 258 12-379 122-409 (430)
80 3lrv_A PRE-mRNA-splicing facto 100.0 5.8E-28 2E-32 221.1 25.3 143 232-379 141-291 (343)
81 3mkq_A Coatomer beta'-subunit; 100.0 4E-27 1.4E-31 239.3 33.1 295 9-379 46-385 (814)
82 4aow_A Guanine nucleotide-bind 100.0 4.1E-27 1.4E-31 214.2 29.5 257 10-340 78-339 (340)
83 4ery_A WD repeat-containing pr 100.0 1.4E-26 4.7E-31 208.9 32.2 243 63-381 24-269 (312)
84 2w18_A PALB2, fancn, partner a 100.0 4.4E-27 1.5E-31 209.6 27.1 182 178-378 154-355 (356)
85 2j04_A TAU60, YPL007P, hypothe 100.0 9.2E-28 3.2E-32 227.1 23.0 272 14-378 11-295 (588)
86 3i2n_A WD repeat-containing pr 100.0 2.5E-27 8.5E-32 217.0 24.5 264 14-341 61-356 (357)
87 3dm0_A Maltose-binding peripla 100.0 5.2E-27 1.8E-31 234.7 28.7 256 10-337 422-692 (694)
88 3gre_A Serine/threonine-protei 100.0 7.2E-28 2.5E-32 227.5 21.0 303 6-381 5-360 (437)
89 4gga_A P55CDC, cell division c 100.0 1.4E-26 4.7E-31 217.9 29.3 267 13-353 142-410 (420)
90 2aq5_A Coronin-1A; WD40 repeat 100.0 2.2E-27 7.7E-32 221.9 23.7 253 9-379 72-341 (402)
91 1sq9_A Antiviral protein SKI8; 100.0 9.1E-27 3.1E-31 216.7 24.2 271 8-340 52-397 (397)
92 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.4E-25 8E-30 211.4 33.1 292 18-379 4-390 (450)
93 4gq1_A NUP37; propeller, trans 100.0 6.2E-27 2.1E-31 218.4 21.3 273 15-378 86-387 (393)
94 4ggc_A P55CDC, cell division c 100.0 1.7E-25 6E-30 201.4 30.0 253 14-340 63-317 (318)
95 3k26_A Polycomb protein EED; W 100.0 7.9E-27 2.7E-31 214.2 21.2 260 17-338 68-366 (366)
96 3bws_A Protein LP49; two-domai 100.0 3.2E-25 1.1E-29 208.9 32.4 288 11-379 116-431 (433)
97 4aez_A CDC20, WD repeat-contai 99.9 6.2E-25 2.1E-29 205.3 33.2 257 11-345 126-387 (401)
98 3vu4_A KMHSV2; beta-propeller 99.9 7.4E-26 2.5E-30 208.2 26.2 184 172-381 72-272 (355)
99 3dwl_C Actin-related protein 2 99.9 6.1E-27 2.1E-31 216.6 19.0 243 63-379 12-280 (377)
100 1k8k_C P40, ARP2/3 complex 41 99.9 8.9E-26 3E-30 207.9 24.6 262 10-341 44-364 (372)
101 1p22_A F-BOX/WD-repeat protein 99.9 4.5E-26 1.6E-30 215.3 23.2 266 8-358 163-433 (435)
102 3dw8_B Serine/threonine-protei 99.9 2.9E-26 9.8E-31 216.8 21.7 147 232-380 191-373 (447)
103 4e54_B DNA damage-binding prot 99.9 8E-26 2.7E-30 213.7 24.4 258 11-342 157-434 (435)
104 2pm7_B Protein transport prote 99.9 3.2E-25 1.1E-29 198.8 25.7 197 165-380 17-238 (297)
105 3ei3_B DNA damage-binding prot 99.9 3.9E-25 1.3E-29 205.1 26.6 247 63-381 74-340 (383)
106 1l0q_A Surface layer protein; 99.9 1.9E-24 6.5E-29 200.8 31.2 266 31-379 3-274 (391)
107 3bg1_A Protein SEC13 homolog; 99.9 1.6E-25 5.4E-30 202.6 22.7 234 10-337 49-292 (316)
108 4a11_B DNA excision repair pro 99.9 2.7E-24 9.4E-29 200.2 29.7 294 15-378 96-403 (408)
109 3zwl_B Eukaryotic translation 99.9 9.9E-24 3.4E-28 193.6 31.3 241 63-380 33-304 (369)
110 2ovr_B FBW7, F-BOX/WD repeat p 99.9 8.3E-24 2.9E-28 200.3 31.2 286 8-338 149-442 (445)
111 2aq5_A Coronin-1A; WD40 repeat 99.9 8.3E-24 2.8E-28 197.6 30.6 251 19-381 35-300 (402)
112 3odt_A Protein DOA1; ubiquitin 99.9 3.3E-24 1.1E-28 192.4 26.5 249 9-343 50-301 (313)
113 3mmy_A MRNA export factor; mRN 99.9 7.1E-24 2.4E-28 194.5 28.6 252 12-337 80-345 (368)
114 4h5i_A Guanine nucleotide-exch 99.9 3.6E-24 1.2E-28 197.7 25.9 252 13-339 68-344 (365)
115 1l0q_A Surface layer protein; 99.9 3.1E-23 1.1E-27 192.6 31.5 289 10-381 24-343 (391)
116 2j04_A TAU60, YPL007P, hypothe 99.9 1.6E-25 5.5E-30 211.9 13.2 260 16-369 83-350 (588)
117 1yfq_A Cell cycle arrest prote 99.9 5.5E-24 1.9E-28 193.7 22.9 243 63-380 12-282 (342)
118 3lrv_A PRE-mRNA-splicing facto 99.9 1.4E-23 5E-28 191.8 23.6 183 173-381 50-245 (343)
119 2vdu_B TRNA (guanine-N(7)-)-me 99.9 7.8E-22 2.7E-26 187.1 30.9 258 12-338 96-391 (450)
120 3f3f_A Nucleoporin SEH1; struc 99.9 1.2E-21 4.2E-26 177.7 27.9 278 9-345 48-344 (351)
121 2w18_A PALB2, fancn, partner a 99.9 9.1E-23 3.1E-27 181.9 19.7 97 233-336 253-355 (356)
122 3jrp_A Fusion protein of prote 99.9 3.8E-22 1.3E-26 183.8 23.4 196 166-380 20-240 (379)
123 1nir_A Nitrite reductase; hemo 99.9 3.3E-21 1.1E-25 186.6 30.1 304 9-379 170-513 (543)
124 2xyi_A Probable histone-bindin 99.9 2.4E-21 8.2E-26 182.7 27.0 220 8-338 171-410 (430)
125 1nir_A Nitrite reductase; hemo 99.9 5.2E-21 1.8E-25 185.2 28.6 288 25-380 144-458 (543)
126 4gq1_A NUP37; propeller, trans 99.9 2.5E-22 8.6E-27 187.2 18.2 246 11-291 129-388 (393)
127 3bws_A Protein LP49; two-domai 99.9 2.2E-20 7.4E-25 175.8 30.8 288 16-380 58-390 (433)
128 3jro_A Fusion protein of prote 99.9 7.1E-21 2.4E-25 191.9 22.4 197 165-380 17-238 (753)
129 1ri6_A Putative isomerase YBHE 99.9 1.7E-19 5.8E-24 163.8 29.5 276 32-379 7-307 (343)
130 2ecf_A Dipeptidyl peptidase IV 99.9 1.9E-19 6.5E-24 181.1 28.5 294 18-379 36-412 (741)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.8E-20 3E-24 171.1 24.3 188 165-379 186-386 (415)
132 3vgz_A Uncharacterized protein 99.8 2.8E-17 9.6E-22 149.9 33.7 283 16-370 38-334 (353)
133 3u4y_A Uncharacterized protein 99.8 7E-18 2.4E-22 152.7 29.4 282 25-381 4-305 (331)
134 1k32_A Tricorn protease; prote 99.8 3E-18 1E-22 178.8 29.4 196 164-379 251-460 (1045)
135 2hqs_A Protein TOLB; TOLB, PAL 99.8 3.7E-18 1.3E-22 160.0 25.8 266 12-362 111-410 (415)
136 2ojh_A Uncharacterized protein 99.8 8.4E-18 2.9E-22 148.8 24.5 244 10-371 33-293 (297)
137 3o4h_A Acylamino-acid-releasin 99.8 1.8E-18 6.1E-23 169.3 21.2 270 18-378 21-313 (582)
138 3hfq_A Uncharacterized protein 99.8 5.3E-17 1.8E-21 148.2 28.8 117 263-379 188-316 (347)
139 1pby_B Quinohemoprotein amine 99.8 5E-17 1.7E-21 147.0 28.0 271 31-380 2-310 (337)
140 1xfd_A DIP, dipeptidyl aminope 99.8 9.4E-18 3.2E-22 168.2 25.2 295 19-379 17-392 (723)
141 1k32_A Tricorn protease; prote 99.8 5E-17 1.7E-21 169.5 27.3 292 11-378 196-500 (1045)
142 1ri6_A Putative isomerase YBHE 99.8 1E-15 3.6E-20 138.6 30.0 276 15-362 34-335 (343)
143 3scy_A Hypothetical bacterial 99.8 4.4E-15 1.5E-19 136.2 32.4 200 171-379 110-336 (361)
144 2z3z_A Dipeptidyl aminopeptida 99.7 2.3E-16 8E-21 157.8 25.4 140 238-378 233-389 (706)
145 2ecf_A Dipeptidyl peptidase IV 99.7 1.7E-16 5.7E-21 159.6 23.9 296 20-378 110-457 (741)
146 2z3z_A Dipeptidyl aminopeptida 99.7 4.2E-16 1.4E-20 155.9 26.6 296 19-379 82-434 (706)
147 2oit_A Nucleoporin 214KDA; NH2 99.7 2.5E-16 8.6E-21 148.3 22.7 118 257-379 145-277 (434)
148 3scy_A Hypothetical bacterial 99.7 9.4E-15 3.2E-19 134.0 29.6 287 17-358 48-360 (361)
149 3pe7_A Oligogalacturonate lyas 99.7 4.7E-16 1.6E-20 143.9 20.0 315 8-381 20-383 (388)
150 3u4y_A Uncharacterized protein 99.7 1.5E-14 5.3E-19 130.6 28.7 193 166-379 48-251 (331)
151 1jmx_B Amine dehydrogenase; ox 99.7 3.8E-15 1.3E-19 135.3 24.4 281 23-380 4-325 (349)
152 1pby_B Quinohemoprotein amine 99.7 1E-14 3.5E-19 131.7 26.7 258 20-349 35-321 (337)
153 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.3E-14 4.6E-19 133.4 27.4 119 261-379 192-340 (365)
154 2oit_A Nucleoporin 214KDA; NH2 99.7 1.6E-16 5.5E-21 149.6 14.3 147 232-379 50-222 (434)
155 1xfd_A DIP, dipeptidyl aminope 99.7 3.3E-15 1.1E-19 149.7 24.3 330 10-368 49-428 (723)
156 2ojh_A Uncharacterized protein 99.7 1.3E-14 4.4E-19 128.2 25.5 192 166-380 50-258 (297)
157 3vgz_A Uncharacterized protein 99.7 1.2E-13 4E-18 125.8 28.7 203 167-380 98-303 (353)
158 3o4h_A Acylamino-acid-releasin 99.7 2.4E-15 8.1E-20 147.1 17.9 136 233-378 125-274 (582)
159 1z68_A Fibroblast activation p 99.7 4.6E-15 1.6E-19 148.7 19.8 292 23-379 20-390 (719)
160 2oiz_A Aromatic amine dehydrog 99.6 1.4E-13 4.9E-18 126.3 23.7 270 37-380 28-334 (361)
161 1q7f_A NHL, brain tumor CG1071 99.6 2.1E-12 7.3E-17 114.2 29.7 115 261-380 163-280 (286)
162 3c5m_A Oligogalacturonate lyas 99.6 1.7E-13 5.6E-18 126.8 20.5 307 9-379 21-381 (396)
163 2oiz_A Aromatic amine dehydrog 99.6 1.5E-12 5.1E-17 119.5 26.0 276 10-362 43-360 (361)
164 3fvz_A Peptidyl-glycine alpha- 99.5 2.7E-12 9.1E-17 116.2 24.8 115 262-379 196-321 (329)
165 4a5s_A Dipeptidyl peptidase 4 99.5 1.9E-13 6.4E-18 137.5 18.4 285 18-379 16-352 (740)
166 1z68_A Fibroblast activation p 99.5 8.8E-13 3E-17 132.1 21.0 312 11-379 49-442 (719)
167 3azo_A Aminopeptidase; POP fam 99.5 1.1E-11 3.7E-16 122.9 28.1 137 240-378 217-365 (662)
168 3hfq_A Uncharacterized protein 99.5 4.7E-12 1.6E-16 115.2 22.7 196 165-379 47-270 (347)
169 3e5z_A Putative gluconolactona 99.4 6E-11 2.1E-15 105.4 25.1 258 9-371 18-278 (296)
170 1jmx_B Amine dehydrogenase; ox 99.4 8.2E-12 2.8E-16 113.2 19.4 153 173-346 13-183 (349)
171 1jof_A Carboxy-CIS,CIS-muconat 99.4 3.5E-11 1.2E-15 110.4 23.7 141 238-379 117-290 (365)
172 2xdw_A Prolyl endopeptidase; a 99.4 1.7E-10 5.7E-15 115.5 25.7 139 239-380 258-414 (710)
173 1rwi_B Serine/threonine-protei 99.3 1.7E-09 5.9E-14 94.3 25.6 115 263-381 151-265 (270)
174 2bkl_A Prolyl endopeptidase; m 99.3 1.9E-10 6.4E-15 114.8 21.5 98 282-380 294-397 (695)
175 2dg1_A DRP35, lactonase; beta 99.3 1.2E-08 4.2E-13 91.8 31.4 108 262-370 182-300 (333)
176 1qks_A Cytochrome CD1 nitrite 99.3 6.5E-09 2.2E-13 100.5 30.3 285 27-380 164-477 (567)
177 2gop_A Trilobed protease; beta 99.3 3.9E-09 1.3E-13 95.6 25.7 121 241-378 199-329 (347)
178 2z2n_A Virginiamycin B lyase; 99.2 2.9E-08 1E-12 87.5 29.9 283 14-378 10-293 (299)
179 4a5s_A Dipeptidyl peptidase 4 99.2 5.3E-10 1.8E-14 112.3 18.9 191 166-379 25-293 (740)
180 3dsm_A Uncharacterized protein 99.2 7E-09 2.4E-13 93.6 24.4 184 175-379 99-301 (328)
181 3sjl_D Methylamine dehydrogena 99.2 4.4E-08 1.5E-12 89.4 28.3 282 23-380 37-363 (386)
182 3azo_A Aminopeptidase; POP fam 99.2 1.7E-09 5.9E-14 107.1 20.8 295 11-380 60-411 (662)
183 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 9.4E-08 3.2E-12 85.0 28.6 117 262-379 172-298 (314)
184 3pe7_A Oligogalacturonate lyas 99.1 1E-08 3.5E-13 94.3 22.7 190 165-379 43-272 (388)
185 3fvz_A Peptidyl-glycine alpha- 99.1 5.7E-09 2E-13 94.2 19.9 180 181-379 69-276 (329)
186 2mad_H Methylamine dehydrogena 99.1 5.3E-07 1.8E-11 82.7 33.0 281 25-380 27-350 (373)
187 1q7f_A NHL, brain tumor CG1071 99.1 2.1E-08 7.1E-13 88.3 22.7 134 239-378 99-236 (286)
188 1qks_A Cytochrome CD1 nitrite 99.1 3E-07 1E-11 88.9 32.3 295 20-379 198-537 (567)
189 2dg1_A DRP35, lactonase; beta 99.1 2E-08 6.9E-13 90.4 22.6 113 262-378 135-261 (333)
190 3dsm_A Uncharacterized protein 99.1 6.8E-08 2.3E-12 87.1 24.7 258 20-357 45-319 (328)
191 1yr2_A Prolyl oligopeptidase; 99.1 1.4E-08 4.9E-13 101.9 21.8 135 241-379 295-440 (741)
192 3no2_A Uncharacterized protein 99.0 2.5E-07 8.5E-12 81.2 25.0 98 265-368 128-231 (276)
193 3hrp_A Uncharacterized protein 99.0 7.7E-07 2.6E-11 82.7 29.5 110 266-378 271-408 (409)
194 3no2_A Uncharacterized protein 99.0 4.9E-08 1.7E-12 85.7 20.2 182 173-379 7-194 (276)
195 2qc5_A Streptogramin B lactona 99.0 8.1E-07 2.8E-11 78.1 28.2 281 16-378 17-298 (300)
196 3c5m_A Oligogalacturonate lyas 98.9 1.5E-08 5.1E-13 93.2 15.3 192 165-379 43-272 (396)
197 3e5z_A Putative gluconolactona 98.9 2.5E-08 8.6E-13 88.3 15.4 143 232-379 42-201 (296)
198 3g4e_A Regucalcin; six bladed 98.9 4.8E-06 1.6E-10 73.6 29.4 108 262-369 149-262 (297)
199 3c75_H MADH, methylamine dehyd 98.9 1.6E-06 5.6E-11 80.4 26.8 278 28-380 82-402 (426)
200 3iuj_A Prolyl endopeptidase; h 98.9 2E-07 6.8E-12 92.9 20.8 92 283-379 305-404 (693)
201 2bkl_A Prolyl endopeptidase; m 98.8 3.6E-07 1.2E-11 91.0 21.2 193 164-379 127-348 (695)
202 1xip_A Nucleoporin NUP159; bet 98.8 5.7E-08 2E-12 88.9 14.0 129 232-378 51-189 (388)
203 2xdw_A Prolyl endopeptidase; a 98.8 3.5E-07 1.2E-11 91.3 20.5 191 164-377 131-363 (710)
204 2qe8_A Uncharacterized protein 98.8 6.8E-07 2.3E-11 81.0 20.7 110 264-373 197-314 (343)
205 1rwi_B Serine/threonine-protei 98.8 9.3E-07 3.2E-11 76.7 20.6 141 233-379 80-221 (270)
206 3sjl_D Methylamine dehydrogena 98.8 9.1E-06 3.1E-10 74.1 27.2 119 236-360 243-384 (386)
207 3dr2_A Exported gluconolactona 98.8 4.2E-06 1.4E-10 74.3 24.8 126 241-374 170-301 (305)
208 1xip_A Nucleoporin NUP159; bet 98.8 2.1E-07 7.3E-12 85.1 16.3 121 232-366 99-230 (388)
209 2gop_A Trilobed protease; beta 98.8 2E-07 6.8E-12 84.2 16.2 123 240-379 152-290 (347)
210 2z2n_A Virginiamycin B lyase; 98.8 1.8E-05 6E-10 69.4 27.8 140 233-378 113-253 (299)
211 2ghs_A AGR_C_1268P; regucalcin 98.7 3.7E-05 1.2E-09 68.9 28.9 106 263-370 180-293 (326)
212 3hrp_A Uncharacterized protein 98.6 5.4E-06 1.8E-10 77.0 20.6 188 166-378 139-352 (409)
213 2hz6_A Endoplasmic reticulum t 98.6 2.1E-08 7.2E-13 92.0 3.4 174 176-380 14-192 (369)
214 2mad_H Methylamine dehydrogena 98.6 0.00023 7.8E-09 65.1 30.2 247 23-345 70-357 (373)
215 2hz6_A Endoplasmic reticulum t 98.5 5.8E-07 2E-11 82.3 11.9 157 175-362 53-216 (369)
216 1mda_H Methylamine dehydrogena 98.5 1.4E-05 4.8E-10 72.8 20.8 140 233-380 178-346 (368)
217 1yr2_A Prolyl oligopeptidase; 98.5 1.2E-05 4E-10 80.7 22.2 135 241-379 244-392 (741)
218 3q7m_A Lipoprotein YFGL, BAMB; 98.5 0.00029 9.8E-09 64.2 28.8 272 30-377 103-375 (376)
219 3q7m_A Lipoprotein YFGL, BAMB; 98.5 0.00043 1.5E-08 63.1 29.4 267 29-380 52-337 (376)
220 1kb0_A Quinohemoprotein alcoho 98.5 3.2E-05 1.1E-09 76.6 22.9 51 329-380 457-507 (677)
221 1kb0_A Quinohemoprotein alcoho 98.4 0.00016 5.3E-09 71.6 27.4 81 283-368 457-539 (677)
222 2qc5_A Streptogramin B lactona 98.4 0.00018 6.2E-09 62.8 25.3 140 233-378 118-258 (300)
223 3g4e_A Regucalcin; six bladed 98.4 1.7E-05 5.7E-10 70.1 18.2 142 233-379 28-179 (297)
224 1yiq_A Quinohemoprotein alcoho 98.4 0.00012 4.3E-09 72.5 25.6 82 283-369 455-538 (689)
225 1yiq_A Quinohemoprotein alcoho 98.4 0.00016 5.5E-09 71.7 26.2 52 328-380 454-505 (689)
226 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 3.9E-05 1.4E-09 67.8 19.3 139 233-379 85-255 (314)
227 3c75_H MADH, methylamine dehyd 98.4 0.00013 4.4E-09 67.6 23.1 74 267-345 324-409 (426)
228 2ece_A 462AA long hypothetical 98.4 0.0016 5.6E-08 60.1 30.9 128 238-368 226-399 (462)
229 3dr2_A Exported gluconolactona 98.3 1.6E-05 5.6E-10 70.4 16.1 142 232-379 59-223 (305)
230 3iuj_A Prolyl endopeptidase; h 98.3 5.3E-05 1.8E-09 75.3 20.2 191 164-379 135-358 (693)
231 2iwa_A Glutamine cyclotransfer 98.2 0.0007 2.4E-08 58.4 22.0 176 180-379 43-236 (266)
232 2ghs_A AGR_C_1268P; regucalcin 98.2 7.5E-05 2.6E-09 66.9 16.6 138 232-379 63-209 (326)
233 1mda_H Methylamine dehydrogena 98.1 0.00036 1.2E-08 63.4 20.4 87 267-359 269-366 (368)
234 2ece_A 462AA long hypothetical 98.1 0.00017 5.9E-09 66.5 16.9 196 169-381 94-353 (462)
235 3hxj_A Pyrrolo-quinoline quino 97.9 0.0045 1.5E-07 54.7 23.4 134 233-379 190-323 (330)
236 3nol_A Glutamine cyclotransfer 97.9 0.002 7E-08 55.0 19.3 164 181-368 65-243 (262)
237 1k3i_A Galactose oxidase precu 97.9 0.0027 9.3E-08 62.5 23.2 58 312-369 460-530 (656)
238 3nok_A Glutaminyl cyclase; bet 97.8 0.0033 1.1E-07 53.8 18.7 170 173-367 67-253 (268)
239 3hxj_A Pyrrolo-quinoline quino 97.8 0.0061 2.1E-07 53.8 21.2 133 233-378 150-282 (330)
240 1kv9_A Type II quinohemoprotei 97.7 0.0034 1.1E-07 62.0 21.0 53 327-380 436-488 (668)
241 3mbr_X Glutamine cyclotransfer 97.6 0.024 8.2E-07 47.9 21.6 163 181-367 43-222 (243)
242 2qe8_A Uncharacterized protein 97.6 0.0012 4.1E-08 59.4 14.3 116 260-378 65-222 (343)
243 1npe_A Nidogen, entactin; glyc 97.4 0.047 1.6E-06 46.7 21.2 141 233-379 51-197 (267)
244 1fwx_A Nitrous oxide reductase 97.3 0.0045 1.5E-07 59.2 14.2 128 240-369 254-407 (595)
245 2fp8_A Strictosidine synthase; 97.3 0.017 5.7E-07 51.2 17.5 144 233-379 33-215 (322)
246 1fwx_A Nitrous oxide reductase 97.2 0.039 1.3E-06 52.7 19.5 70 309-379 278-360 (595)
247 2fp8_A Strictosidine synthase; 97.2 0.11 3.8E-06 45.7 24.5 110 264-379 187-312 (322)
248 2ad6_A Methanol dehydrogenase 97.2 0.19 6.6E-06 48.4 26.3 52 328-380 443-494 (571)
249 1flg_A Protein (quinoprotein e 97.0 0.28 9.5E-06 47.3 27.4 83 282-369 465-549 (582)
250 2ad6_A Methanol dehydrogenase 97.0 0.29 1E-05 47.1 28.7 84 282-370 443-528 (571)
251 1w6s_A Methanol dehydrogenase 96.9 0.32 1.1E-05 47.1 29.2 51 318-368 483-535 (599)
252 3nok_A Glutaminyl cyclase; bet 96.9 0.1 3.5E-06 44.5 17.9 136 232-379 67-209 (268)
253 2p4o_A Hypothetical protein; p 96.9 0.19 6.4E-06 43.9 27.9 97 270-369 175-277 (306)
254 3tc9_A Hypothetical hydrolase; 96.9 0.077 2.6E-06 49.2 18.5 141 233-379 152-300 (430)
255 1ijq_A LDL receptor, low-densi 96.9 0.2 7E-06 44.1 22.5 142 233-379 45-194 (316)
256 3sre_A PON1, serum paraoxonase 96.7 0.14 4.7E-06 46.0 18.2 140 238-380 81-252 (355)
257 2p9w_A MAL S 1 allergenic prot 96.6 0.1 3.5E-06 46.1 16.0 148 233-381 28-216 (334)
258 3amr_A 3-phytase; beta-propell 96.6 0.37 1.3E-05 42.9 24.7 188 178-380 47-263 (355)
259 2iwa_A Glutamine cyclotransfer 96.6 0.11 3.8E-06 44.5 15.6 131 239-379 43-180 (266)
260 3nol_A Glutamine cyclotransfer 96.5 0.12 4.2E-06 43.9 15.6 137 232-379 55-200 (262)
261 3v65_B Low-density lipoprotein 96.5 0.27 9.4E-06 44.7 18.9 142 233-379 131-276 (386)
262 3v64_C Agrin; beta propeller, 96.4 0.31 1.1E-05 43.6 18.3 142 233-379 88-233 (349)
263 3sov_A LRP-6, low-density lipo 96.3 0.51 1.7E-05 41.6 18.7 143 233-379 50-196 (318)
264 3p5b_L Low density lipoprotein 96.1 0.83 2.8E-05 41.7 22.1 143 233-379 127-276 (400)
265 4hw6_A Hypothetical protein, I 96.1 0.18 6.1E-06 46.7 15.4 133 240-379 162-303 (433)
266 1kv9_A Type II quinohemoprotei 96.0 0.3 1E-05 48.1 17.5 187 178-380 73-333 (668)
267 2xe4_A Oligopeptidase B; hydro 96.0 0.2 7E-06 50.0 16.4 135 241-379 202-353 (751)
268 1w6s_A Methanol dehydrogenase 96.0 1.3 4.3E-05 42.9 27.4 53 327-380 451-503 (599)
269 2xe4_A Oligopeptidase B; hydro 95.9 0.066 2.3E-06 53.5 12.5 113 263-381 175-305 (751)
270 3mbr_X Glutamine cyclotransfer 95.8 0.47 1.6E-05 39.9 15.4 136 233-379 34-178 (243)
271 4a2l_A BT_4663, two-component 95.8 1.8 6.3E-05 43.2 29.5 139 233-378 370-524 (795)
272 1flg_A Protein (quinoprotein e 95.7 1.6 5.5E-05 42.0 29.3 52 328-380 465-516 (582)
273 3qqz_A Putative uncharacterize 95.6 0.85 2.9E-05 38.7 16.4 113 262-378 27-149 (255)
274 3p5b_L Low density lipoprotein 95.6 1.3 4.5E-05 40.3 19.7 138 239-378 91-232 (400)
275 1ijq_A LDL receptor, low-densi 95.6 1.1 3.7E-05 39.3 20.1 135 239-378 9-150 (316)
276 4a2l_A BT_4663, two-component 95.4 2.4 8.3E-05 42.4 31.8 139 233-378 323-478 (795)
277 3m0c_C LDL receptor, low-densi 95.4 1.8 6.3E-05 43.3 20.5 142 233-378 439-587 (791)
278 2p9w_A MAL S 1 allergenic prot 95.3 0.63 2.2E-05 41.0 14.7 138 239-377 99-262 (334)
279 3m0c_C LDL receptor, low-densi 95.2 1 3.5E-05 45.1 18.0 140 237-378 401-544 (791)
280 3pbp_A Nucleoporin NUP82; beta 95.1 0.41 1.4E-05 43.7 13.3 71 309-380 67-158 (452)
281 3amr_A 3-phytase; beta-propell 95.1 1.7 5.9E-05 38.6 17.3 140 233-379 43-207 (355)
282 1npe_A Nidogen, entactin; glyc 94.9 1.5 5.1E-05 37.1 25.8 140 233-379 94-237 (267)
283 1n7d_A LDL receptor, low-densi 94.8 0.15 5.2E-06 50.4 10.8 141 235-379 423-570 (699)
284 2p4o_A Hypothetical protein; p 94.7 1.4 4.8E-05 38.2 15.8 109 264-378 34-145 (306)
285 2ism_A Putative oxidoreductase 94.7 0.76 2.6E-05 41.1 14.1 103 263-368 32-153 (352)
286 3qqz_A Putative uncharacterize 94.6 1.8 6.2E-05 36.7 21.6 143 232-376 83-249 (255)
287 3kya_A Putative phosphatase; s 94.6 1.2 4.1E-05 41.8 15.6 135 239-378 161-339 (496)
288 4hw6_A Hypothetical protein, I 94.4 1.8 6.3E-05 39.8 16.5 143 235-379 245-432 (433)
289 3tc9_A Hypothetical hydrolase; 94.1 0.5 1.7E-05 43.6 11.9 110 263-379 138-256 (430)
290 3sov_A LRP-6, low-density lipo 93.9 3.1 0.0001 36.5 19.6 141 233-379 94-237 (318)
291 3a9g_A Putative uncharacterize 93.6 1.1 3.8E-05 40.0 12.9 102 263-368 30-153 (354)
292 1k3i_A Galactose oxidase precu 93.4 0.77 2.6E-05 44.9 12.5 111 267-379 191-322 (656)
293 3v65_B Low-density lipoprotein 93.2 4.7 0.00016 36.4 24.3 139 233-377 174-315 (386)
294 3s94_A LRP-6, low-density lipo 92.9 7.2 0.00025 37.7 19.4 142 234-379 56-201 (619)
295 3a9g_A Putative uncharacterize 92.9 3.3 0.00011 36.9 14.9 133 233-368 42-216 (354)
296 3pbp_A Nucleoporin NUP82; beta 92.4 6.4 0.00022 36.0 19.4 138 238-377 39-209 (452)
297 1cru_A Protein (soluble quinop 92.2 3.2 0.00011 38.5 14.2 105 263-369 28-163 (454)
298 3v64_C Agrin; beta propeller, 92.1 6.1 0.00021 35.0 25.0 139 233-377 131-272 (349)
299 3ei3_A DNA damage-binding prot 90.8 10 0.00036 39.7 17.6 111 263-379 515-635 (1158)
300 1tl2_A L10, protein (tachylect 90.7 1.5 5.2E-05 36.2 9.0 109 263-381 42-162 (236)
301 3das_A Putative oxidoreductase 90.1 7.7 0.00026 34.4 13.9 106 262-368 32-158 (347)
302 1n7d_A LDL receptor, low-densi 90.0 1.4 4.7E-05 43.6 9.9 141 233-379 468-613 (699)
303 2wg3_C Hedgehog-interacting pr 89.6 9.1 0.00031 35.5 14.6 109 263-371 15-160 (463)
304 2g8s_A Glucose/sorbosone dehyd 89.4 4.9 0.00017 35.7 12.3 107 263-369 19-149 (353)
305 3v9f_A Two-component system se 89.1 18 0.00062 35.9 17.5 143 232-378 270-434 (781)
306 3kya_A Putative phosphatase; s 89.0 15 0.0005 34.4 16.8 148 232-381 261-476 (496)
307 1tl2_A L10, protein (tachylect 88.2 7.3 0.00025 32.2 11.2 111 264-382 90-210 (236)
308 1cru_A Protein (soluble quinop 87.5 14 0.00049 34.1 14.4 115 262-378 77-257 (454)
309 3das_A Putative oxidoreductase 85.3 19 0.00066 31.8 15.6 133 233-367 45-219 (347)
310 3ei3_A DNA damage-binding prot 84.8 42 0.0014 35.2 21.9 132 238-380 862-999 (1158)
311 3v9f_A Two-component system se 82.8 39 0.0013 33.4 25.9 138 233-378 376-522 (781)
312 2g8s_A Glucose/sorbosone dehyd 82.4 26 0.00087 31.0 13.2 132 233-366 32-214 (353)
313 3sre_A PON1, serum paraoxonase 81.7 28 0.00096 30.9 18.0 126 239-370 138-287 (355)
314 2xn4_A Kelch-like protein 2; s 81.1 25 0.00084 29.9 13.7 91 283-379 173-275 (302)
315 2vpj_A Kelch-like protein 12; 80.9 25 0.00085 29.8 13.8 100 275-379 162-277 (301)
316 2ism_A Putative oxidoreductase 80.4 11 0.00036 33.5 9.9 68 309-379 32-113 (352)
317 2xbg_A YCF48-like protein; pho 79.1 31 0.0011 29.9 17.4 107 260-373 161-272 (327)
318 1bpo_A Protein (clathrin); cla 78.7 41 0.0014 31.0 23.5 66 313-378 264-329 (494)
319 4a0p_A LRP6, LRP-6, low-densit 76.7 56 0.0019 31.5 20.8 138 233-378 95-235 (628)
320 2xbg_A YCF48-like protein; pho 74.9 41 0.0014 29.1 18.1 111 261-378 204-320 (327)
321 2vpj_A Kelch-like protein 12; 72.9 42 0.0014 28.3 14.6 91 284-379 129-230 (301)
322 1xi4_A Clathrin heavy chain; a 71.2 82 0.0028 33.8 14.4 137 239-381 85-236 (1630)
323 4gq2_M Nucleoporin NUP120; bet 70.7 3.6 0.00012 42.1 4.6 36 20-55 237-272 (950)
324 2xzh_A Clathrin heavy chain 1; 69.9 58 0.002 28.7 24.1 63 316-378 268-330 (365)
325 1zgk_A Kelch-like ECH-associat 69.4 52 0.0018 28.0 12.4 91 283-379 184-286 (308)
326 2uvk_A YJHT; unknown function, 68.4 27 0.00093 30.5 9.5 40 330-371 286-327 (357)
327 4asc_A Kelch repeat and BTB do 68.2 56 0.0019 27.8 13.0 83 283-370 165-253 (315)
328 4asc_A Kelch repeat and BTB do 64.3 67 0.0023 27.3 13.7 60 318-379 98-173 (315)
329 4fhn_B Nucleoporin NUP120; pro 63.2 4.7 0.00016 42.2 3.7 36 20-55 239-274 (1139)
330 4a0p_A LRP6, LRP-6, low-densit 61.9 1.2E+02 0.004 29.3 27.0 141 233-379 52-196 (628)
331 2xn4_A Kelch-like protein 2; s 61.8 72 0.0025 26.8 13.9 60 318-379 155-228 (302)
332 2be1_A Serine/threonine-protei 60.8 22 0.00074 31.4 7.0 112 232-346 12-138 (339)
333 3ii7_A Kelch-like protein 7; p 60.7 76 0.0026 26.8 14.3 139 233-379 15-177 (306)
334 3sbq_A Nitrous-oxide reductase 59.6 19 0.00064 34.3 6.5 70 309-379 324-407 (638)
335 4gq2_M Nucleoporin NUP120; bet 59.5 13 0.00046 37.9 6.2 37 309-345 237-273 (950)
336 4a9v_A PHOX; hydrolase, beta-p 58.4 50 0.0017 31.5 9.3 60 308-367 476-548 (592)
337 3ii7_A Kelch-like protein 7; p 56.4 53 0.0018 27.7 8.9 60 318-379 55-126 (306)
338 2woz_A Kelch repeat and BTB do 56.0 94 0.0032 26.4 13.5 60 318-379 109-183 (318)
339 3sbq_A Nitrous-oxide reductase 55.7 1.4E+02 0.0049 28.4 12.1 72 265-338 326-408 (638)
340 1xi4_A Clathrin heavy chain; a 53.0 2.5E+02 0.0085 30.3 18.0 46 311-356 262-307 (1630)
341 3zwu_A Alkaline phosphatase PH 51.7 55 0.0019 31.3 8.6 58 310-367 478-548 (592)
342 2zwa_A Leucine carboxyl methyl 50.6 1.6E+02 0.0054 28.7 12.1 106 272-379 500-634 (695)
343 3f7f_A Nucleoporin NUP120; nuc 49.0 14 0.00047 36.2 4.0 34 20-55 223-256 (729)
344 2woz_A Kelch repeat and BTB do 47.3 1.3E+02 0.0044 25.5 12.6 82 283-370 175-263 (318)
345 4fhn_B Nucleoporin NUP120; pro 47.3 15 0.00051 38.5 4.3 36 310-345 240-275 (1139)
346 1zgk_A Kelch-like ECH-associat 46.9 1.3E+02 0.0045 25.3 16.4 91 283-379 137-239 (308)
347 3f7f_A Nucleoporin NUP120; nuc 45.7 35 0.0012 33.4 6.2 34 310-345 224-257 (729)
348 2uvk_A YJHT; unknown function, 44.7 1.2E+02 0.0042 26.1 9.5 52 318-370 65-128 (357)
349 3s94_A LRP-6, low-density lipo 42.5 2.3E+02 0.008 27.0 33.1 142 233-379 364-509 (619)
350 2xzh_A Clathrin heavy chain 1; 39.6 2E+02 0.0068 25.4 25.7 30 265-294 263-292 (365)
351 2be1_A Serine/threonine-protei 35.2 68 0.0023 28.2 6.0 28 321-348 12-39 (339)
352 2zwa_A Leucine carboxyl methyl 29.9 3.9E+02 0.013 25.9 13.1 63 317-379 499-576 (695)
353 3s25_A Hypothetical 7-bladed b 29.8 2.6E+02 0.0088 23.8 9.2 86 269-367 152-240 (302)
354 2wg3_C Hedgehog-interacting pr 27.1 3.6E+02 0.012 24.6 18.0 96 233-328 29-159 (463)
355 3plv_C 66 kDa U4/U6.U5 small n 23.2 37 0.0013 16.2 1.2 8 1-8 14-21 (21)
356 3uc1_A DNA gyrase subunit A; D 23.1 3.6E+02 0.012 23.2 13.7 104 273-378 109-226 (327)
357 3no0_A DNA gyrase subunit A; D 20.6 3.8E+02 0.013 22.4 13.9 104 273-379 80-195 (276)
358 3s25_A Hypothetical 7-bladed b 20.3 3.9E+02 0.013 22.6 12.0 60 314-378 110-174 (302)
No 1
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.9e-42 Score=313.49 Aligned_cols=296 Identities=18% Similarity=0.263 Sum_probs=226.0
Q ss_pred CCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
.++..+|+||.+.|++++|+|++++|+|||.|++|++||..+++.+..+..|. ..+.+++++| ++..+++++.|++
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~--~~v~~~~~s~--~~~~l~s~~~d~~ 120 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRS--SWVMTCAYAP--SGNYVACGGLDNI 120 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS--SCEEEEEECT--TSSEEEEEETTCE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCC--ccEEEEEECC--CCCEEEEEeCCCe
Confidence 45567899999999999999999999999999999999998877766554443 4578889998 4689999999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
+++||+.+++... . .. ..+. ... ..+. ...+.+
T Consensus 121 v~iw~~~~~~~~~--~-~~---------~~~~-~h~---------~~v~-------------------------~~~~~~ 153 (340)
T 1got_B 121 CSIYNLKTREGNV--R-VS---------RELA-GHT---------GYLS-------------------------CCRFLD 153 (340)
T ss_dssp EEEEETTTCSBSC--E-EE---------EEEE-CCS---------SCEE-------------------------EEEEEE
T ss_pred EEEEECccCCCcc--e-eE---------EEec-CCC---------ccEE-------------------------EEEECC
Confidence 9999997653100 0 00 0000 000 0000 000112
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
++ . +++++.|++|++||+++++.+..+..+ .+.+.++ .+.|.. ..+++|+.|++|++||+
T Consensus 154 ~~-~--l~s~s~d~~i~~wd~~~~~~~~~~~~h----------~~~v~~~---~~~~~~----~~l~sg~~d~~v~~wd~ 213 (340)
T 1got_B 154 DN-Q--IVTSSGDTTCALWDIETGQQTTTFTGH----------TGDVMSL---SLAPDT----RLFVSGACDASAKLWDV 213 (340)
T ss_dssp TT-E--EEEEETTSCEEEEETTTTEEEEEECCC----------SSCEEEE---EECTTS----SEEEEEETTSCEEEEET
T ss_pred CC-c--EEEEECCCcEEEEECCCCcEEEEEcCC----------CCceEEE---EECCCC----CEEEEEeCCCcEEEEEC
Confidence 22 2 344566899999999998877766432 1222222 244432 36889999999999999
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW 327 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~ 327 (383)
++. .+...+..|..+|.++.|+|++..+++++.|+.|++||++... .............+.+++|+|++++|++|+.
T Consensus 214 ~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 290 (340)
T 1got_B 214 REG-MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290 (340)
T ss_dssp TTC-SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCC-eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCCEEEEECC
Confidence 874 4567788999999999999999999999999999999997543 2222122222346999999999999999999
Q ss_pred CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
|++|++||+.+++.+..+.+|...|.+++|+|||++|||||.|++|+|||
T Consensus 291 d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 291 DFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999999999999999999999999999999997
No 2
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.9e-43 Score=324.63 Aligned_cols=316 Identities=13% Similarity=0.200 Sum_probs=229.8
Q ss_pred CCCCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEeccc
Q 016769 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (383)
Q Consensus 5 ~~~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (383)
|.......+|+||++.|++++|+|++++|+|||.|++|+|||..++++...+..|. ..+.+++++| ++..|++++.
T Consensus 53 ~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~--~~v~~~~~s~--~g~~las~~~ 128 (380)
T 3iz6_a 53 PTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHC--PWVMECAFAP--NGQSVACGGL 128 (380)
T ss_dssp CCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCC--TTCCCCEECT--TSSEEEECCS
T ss_pred cceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCC--CCEEEEEECC--CCCEEEEeeC
Confidence 34444567899999999999999999999999999999999998887776665554 3577888988 4789999999
Q ss_pred CCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
|+++++||+.+............ ...+ +... .....
T Consensus 129 d~~v~iw~~~~~~~~~~~~~~~~--------------------~~~g--------------------h~~~----v~~~~ 164 (380)
T 3iz6_a 129 DSACSIFNLSSQADRDGNMPVSR--------------------VLTG--------------------HKGY----ASSCQ 164 (380)
T ss_dssp SSCCEEEECCCCSSCCCSSTTCC--------------------BCCC--------------------CSSC----CCCCB
T ss_pred CCcEEEEECCCCccccCCcccee--------------------eccC--------------------CCcc----eEEEE
Confidence 99999999975421100000000 0000 0000 00011
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
+.+++.. .+++|+.|++|++||+++++.+..+.... ...+.....++. +.+. +...+++|+.|++|++
T Consensus 165 ~~~~~~~-~l~s~s~D~~i~~wd~~~~~~~~~~~~~~-----~~~h~~~v~~~~---~~~~---~~~~l~sgs~D~~v~~ 232 (380)
T 3iz6_a 165 YVPDQET-RLITGSGDQTCVLWDVTTGQRISIFGSEF-----PSGHTADVLSLS---INSL---NANMFISGSCDTTVRL 232 (380)
T ss_dssp CCSSSSS-CEEEECTTSCEEEECTTTCCEEEEECCCS-----SSSCCSCEEEEE---ECSS---SCCEEEEEETTSCEEE
T ss_pred EecCCCC-EEEEECCCCcEEEEEcCCCcEEEEeeccc-----CCCCccCeEEEE---eecC---CCCEEEEEECCCeEEE
Confidence 2232222 34566778999999999998776653211 001112222222 2221 1236889999999999
Q ss_pred EeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeee---ecCCCCeEEEEECCCCcE
Q 016769 245 WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI---NLERPGISGTSIRPDSKI 321 (383)
Q Consensus 245 wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~---~~~~~~i~~~~~~p~~~~ 321 (383)
||++....++..+.+|..+|.++.|+|++..+++++.|++|++||+........+.... ..+...+.+++|+|++++
T Consensus 233 wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 312 (380)
T 3iz6_a 233 WDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRL 312 (380)
T ss_dssp EETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSE
T ss_pred EECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCE
Confidence 99986566677888999999999999999999999999999999997543222111111 111224889999999999
Q ss_pred EEEEeCCCcEEEEEcCCCceEEEe----cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 322 AATAGWDRRVRIYNYRKGSALAIL----KYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 322 l~s~~~dg~i~iwd~~~~~~~~~~----~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+++|+.||+|++||+.+++.+..+ .+|...|.+++|+|||++|++||.|++|++|++..
T Consensus 313 l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 313 LFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp EEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred EEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 999999999999999999887766 67999999999999999999999999999999863
No 3
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.6e-41 Score=309.15 Aligned_cols=303 Identities=17% Similarity=0.237 Sum_probs=227.4
Q ss_pred CCCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccC
Q 016769 6 PPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 6 ~~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
.+.++..+|.||++.|++|+|+|++++|+|||.|++|+|||..+++....+..|. ..+.+++++| ++..+++++.|
T Consensus 52 ~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~--~~v~~~~~sp--~g~~lasg~~d 127 (354)
T 2pbi_B 52 FVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPC--TWVMACAYAP--SGCAIACGGLD 127 (354)
T ss_dssp CCCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS--SCCCEEEECT--TSSEEEEESTT
T ss_pred cccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCC--CCEEEEEECC--CCCEEEEeeCC
Confidence 4455677899999999999999999999999999999999988776655544332 4578889998 46899999999
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
+++++|++.......... .. ..+..... ......+
T Consensus 128 ~~i~v~~~~~~~~~~~~~-~~-------~~~~~h~~-------------------------------------~v~~~~~ 162 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAA-KK-------KSVAMHTN-------------------------------------YLSACSF 162 (354)
T ss_dssp SEEEEEECCCCTTCCSGG-GC-------EEEEECSS-------------------------------------CEEEEEE
T ss_pred CCEEEEEEeccccccccc-cc-------eeeeccCC-------------------------------------cEEEEEE
Confidence 999999986542110000 00 00000000 0000112
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 245 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w 245 (383)
.+++. . +++++.|++|++||+++++.+..+..+ .....++. +.|.. ....+++|+.||+|++|
T Consensus 163 ~~~~~-~-l~t~s~D~~v~lwd~~~~~~~~~~~~h----------~~~v~~~~---~~~~~--~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 163 TNSDM-Q-ILTASGDGTCALWDVESGQLLQSFHGH----------GADVLCLD---LAPSE--TGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp CSSSS-E-EEEEETTSEEEEEETTTCCEEEEEECC----------SSCEEEEE---ECCCS--SCCEEEEEETTSCEEEE
T ss_pred eCCCC-E-EEEEeCCCcEEEEeCCCCeEEEEEcCC----------CCCeEEEE---EEeCC--CCCEEEEEeCCCeEEEE
Confidence 23333 3 345567899999999999887776532 12223322 33321 12368899999999999
Q ss_pred eCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE
Q 016769 246 DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 246 dl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
|+++. .++..+..|..+|.++.|+|++..+++++.|++|++||+..... ............+.+++|+|++++|++|
T Consensus 226 d~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~--~~~~~~~~~~~~~~~~~~s~~g~~l~~g 302 (354)
T 2pbi_B 226 DMRSG-QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE--VAIYSKESIIFGASSVDFSLSGRLLFAG 302 (354)
T ss_dssp ETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred ECCCC-cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE--EEEEcCCCcccceeEEEEeCCCCEEEEE
Confidence 99984 45777889999999999999999999999999999999975432 2111112223468899999999999999
Q ss_pred eCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 326 GWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
+.|++|++||+.+++.+..+.+|...|.+++|+|||++||+|+.|++|++|+
T Consensus 303 ~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 303 YNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999999999999999999999999999999996
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-41 Score=318.54 Aligned_cols=291 Identities=17% Similarity=0.286 Sum_probs=227.3
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
.....|.||+++|++++|+|++++|+|||.|++|+|||..+++....+..|. ..+.+++|.+ ++..|++|+.|++|
T Consensus 99 ~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~--~~V~~v~~~~--~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT--DSVQDISFDH--SGKLLASCSADMTI 174 (410)
T ss_dssp SCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCS--SCEEEEEECT--TSSEEEEEETTSCC
T ss_pred CceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccC--CcEEEEEEcC--CCCEEEEEeCCCeE
Confidence 3467899999999999999999999999999999999999887776665554 4578899988 46889999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||++++++.. .+..+. .. .....+.++
T Consensus 175 ~iwd~~~~~~~~----~~~~h~----------------------~~-------------------------V~~v~~~p~ 203 (410)
T 1vyh_C 175 KLWDFQGFECIR----TMHGHD----------------------HN-------------------------VSSVSIMPN 203 (410)
T ss_dssp CEEETTSSCEEE----CCCCCS----------------------SC-------------------------EEEEEECSS
T ss_pred EEEeCCCCceeE----EEcCCC----------------------CC-------------------------EEEEEEeCC
Confidence 999997653211 000000 00 000112233
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
+. + +++|+.|++|++||++++.++..+..+. ....++ .+.++ ...+++|+.|++|++||++
T Consensus 204 ~~-~-l~s~s~D~~i~~wd~~~~~~~~~~~~h~----------~~v~~~---~~~~~----g~~l~s~s~D~~v~vwd~~ 264 (410)
T 1vyh_C 204 GD-H-IVSASRDKTIKMWEVQTGYCVKTFTGHR----------EWVRMV---RPNQD----GTLIASCSNDQTVRVWVVA 264 (410)
T ss_dssp SS-E-EEEEETTSEEEEEETTTCCEEEEEECCS----------SCEEEE---EECTT----SSEEEEEETTSCEEEEETT
T ss_pred CC-E-EEEEeCCCeEEEEECCCCcEEEEEeCCC----------ccEEEE---EECCC----CCEEEEEcCCCeEEEEECC
Confidence 33 3 4556778999999999998877665321 111121 23332 2368899999999999998
Q ss_pred CCCCceeeeeccccCeEEEEEeCC--------------------CCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 249 NPGIPLTAMKVHLEPVLCLSIDES--------------------CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 249 ~~~~~~~~~~~h~~~v~~~~~~~~--------------------~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
+. .....+..|...|.++.|++. +..+++|+.|+.|++||+.... +. ..+..+..
T Consensus 265 ~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~--~~--~~~~~h~~ 339 (410)
T 1vyh_C 265 TK-ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM--CL--MTLVGHDN 339 (410)
T ss_dssp TC-CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE--EE--EEEECCSS
T ss_pred CC-ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc--eE--EEEECCCC
Confidence 74 456678889999999999885 4568999999999999997543 22 23455677
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.|.+++|+|++++|++++.|++|++||+.+++.+..+.+|...|.+++|+|++++||+||.|++|++|++
T Consensus 340 ~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999986
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=300.60 Aligned_cols=288 Identities=18% Similarity=0.313 Sum_probs=221.0
Q ss_pred eeeeecCCceeeEEEeCC----CCeEEEecCCCeEEEeeCcccccc--cccccccccceeeeeeecCCCCcceeEecccC
Q 016769 12 AVLRGHRASVTDVCFHQT----KPILFAGTTGGELRIWDTVQHRTV--SSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~----~~~L~sgs~D~~v~vW~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
..+++|.+.|++|+|+|+ +.+|+|||.|++|+||+....+.. ..+..|. ..+.++.+.+. +..+++++.|
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~--~~v~~~~~~~~--~~~l~s~s~D 101 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQ--LGVVSVDISHT--LPIAASSSLD 101 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCS--SCEEEEEECSS--SSEEEEEETT
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCC--CCEEEEEECCC--CCEEEEEeCC
Confidence 456799999999999875 569999999999999998665432 2233333 46788888873 5789999999
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
++|++||+++++... .+ ..... .+ ....+
T Consensus 102 ~~i~lWd~~~~~~~~----~~------------~~~~~----------~~-------------------------~~~~~ 130 (321)
T 3ow8_A 102 AHIRLWDLENGKQIK----SI------------DAGPV----------DA-------------------------WTLAF 130 (321)
T ss_dssp SEEEEEETTTTEEEE----EE------------ECCTT----------CC-------------------------CCEEE
T ss_pred CcEEEEECCCCCEEE----EE------------eCCCc----------cE-------------------------EEEEE
Confidence 999999998763210 00 00000 00 00123
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 245 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w 245 (383)
+++++ + +++++.++.+++||+++++....+.... ....++ .+.|+. ..+++|+.|+.|++|
T Consensus 131 spdg~-~-l~~g~~dg~v~i~~~~~~~~~~~~~~~~----------~~v~~~---~~spdg----~~lasg~~dg~i~iw 191 (321)
T 3ow8_A 131 SPDSQ-Y-LATGTHVGKVNIFGVESGKKEYSLDTRG----------KFILSI---AYSPDG----KYLASGAIDGIINIF 191 (321)
T ss_dssp CTTSS-E-EEEECTTSEEEEEETTTCSEEEEEECSS----------SCEEEE---EECTTS----SEEEEEETTSCEEEE
T ss_pred CCCCC-E-EEEEcCCCcEEEEEcCCCceeEEecCCC----------ceEEEE---EECCCC----CEEEEEcCCCeEEEE
Confidence 34443 3 4456778999999999988766654321 112222 355542 368899999999999
Q ss_pred eCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE
Q 016769 246 DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 246 dl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
|+++. ..+..++.|..+|.++.|++++..+++++.|+.|++||++.... ...+..+...|.+++|+|++++|+++
T Consensus 192 d~~~~-~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~sp~~~~l~s~ 266 (321)
T 3ow8_A 192 DIATG-KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL----AGTLSGHASWVLNVAFCPDDTHFVSS 266 (321)
T ss_dssp ETTTT-EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred ECCCC-cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce----eEEEcCCCCceEEEEECCCCCEEEEE
Confidence 99874 45777889999999999999999999999999999999975432 22345567789999999999999999
Q ss_pred eCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 326 GWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+.|++|++||+.+++.+.++.+|...|.+++|+|++++|++++.|++|++||.
T Consensus 267 s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 267 SSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred eCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 99999999999999999999999999999999999999999999999999997
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.4e-39 Score=288.04 Aligned_cols=294 Identities=15% Similarity=0.200 Sum_probs=220.0
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
+...+|.+|.+.|++|+|+|++++|+||+.||+|+|||+.+++++..+..|. ..+.++.+.+ +++.|++++.|++|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTE--TPVRAGKFIA--RKNWIIVGSDDFRI 79 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEEEEEG--GGTEEEEEETTSEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccC--CcEEEEEEeC--CCCEEEEECCCCEE
Confidence 4677899999999999999999999999999999999998887766655443 3577888887 46889999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||+++++.. ..+..+.. .+ ....+.++
T Consensus 80 ~vwd~~~~~~~----~~~~~h~~----------------------~v-------------------------~~~~~~~~ 108 (304)
T 2ynn_A 80 RVFNYNTGEKV----VDFEAHPD----------------------YI-------------------------RSIAVHPT 108 (304)
T ss_dssp EEEETTTCCEE----EEEECCSS----------------------CE-------------------------EEEEECSS
T ss_pred EEEECCCCcEE----EEEeCCCC----------------------cE-------------------------EEEEEcCC
Confidence 99999876421 11100000 00 00112334
Q ss_pred CCceeeeccCCcceEEEEecCCCCeee-EeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCT-RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
++ ++++|+.|++|++||++++..+. .+.. +...+.++ .|.|.+ ...+++|+.|++|++||+
T Consensus 109 ~~--~l~sgs~D~~v~lWd~~~~~~~~~~~~~----------h~~~v~~v---~~~p~~---~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 109 KP--YVLSGSDDLTVKLWNWENNWALEQTFEG----------HEHFVMCV---AFNPKD---PSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp SS--EEEEEETTSCEEEEEGGGTTEEEEEECC----------CCSCEEEE---EECTTC---TTEEEEEETTSEEEEEET
T ss_pred CC--EEEEECCCCeEEEEECCCCcchhhhhcc----------cCCcEEEE---EECCCC---CCEEEEEeCCCeEEEEEC
Confidence 33 34567788999999998875443 3322 11223332 354422 235889999999999999
Q ss_pred CCCCCceeeeeccccCeEEEEEeC--CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDE--SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
++..........|...+..+.+.+ ++..+++++.|+.|++||++... + ...+..+...+.+++|+|++++|++|
T Consensus 171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~--~--~~~~~~h~~~v~~~~~~p~~~~l~s~ 246 (304)
T 2ynn_A 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS--C--VATLEGHMSNVSFAVFHPTLPIIISG 246 (304)
T ss_dssp TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE--E--EEEEECCSSCEEEEEECSSSSEEEEE
T ss_pred CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc--c--ceeeCCCCCCEEEEEECCCCCEEEEE
Confidence 875544444455667888888865 55678999999999999997543 2 23455677889999999999999999
Q ss_pred eCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC--EEEEEeCCCcEEEEeCCC
Q 016769 326 GWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK--LMASASEDSTVALWELYP 380 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~--~las~s~d~~i~~w~~~~ 380 (383)
+.||+|++||+.+++.+.++..|...+.+++|+|+++ ++|+|+.|| +.+|++..
T Consensus 247 s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 247 SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred cCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 9999999999999999999999999999999999886 578887665 77777753
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.4e-38 Score=293.44 Aligned_cols=292 Identities=18% Similarity=0.237 Sum_probs=203.7
Q ss_pred eeecCCceeeEEEeCCCCeEEEecC------CCeEEEeeCcccccccccccc--cccceeeeeeecCCCCcceeEecccC
Q 016769 14 LRGHRASVTDVCFHQTKPILFAGTT------GGELRIWDTVQHRTVSSSWVH--SAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 14 l~gH~~~V~~v~f~~~~~~L~sgs~------D~~v~vW~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
..+|.+.|++|+|+|||++|+|||. |+.|++|+..++.....+... .....+.+++|+++ ..+++++.|
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d---~~~l~~s~d 114 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSE---KGILVASDS 114 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETT---TEEEEEETT
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCC---CCEEEEECC
Confidence 3579999999999999999999998 778999998766543322111 12245889999983 567888999
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
++|++||+.+++...........+ ... .....+
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h----------------------~~~-------------------------V~~v~~ 147 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEH----------------------DDI-------------------------VKTLSV 147 (357)
T ss_dssp SCEEEC--------CCCCEEECCC----------------------SSC-------------------------EEEEEE
T ss_pred CEEEEeeccccceeEEEeeccCCC----------------------CCC-------------------------EEEEEE
Confidence 999999998764321100000000 000 001123
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 245 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w 245 (383)
.+++. + +++++.+++|++||+++++.+..+..+ ...+.++ .|.+.. ...+++++.|++|++|
T Consensus 148 spdg~-~-l~sgs~dg~v~iwd~~~~~~~~~~~~h----------~~~v~~v---~~s~~~---~~~~~s~~~dg~v~~w 209 (357)
T 4g56_B 148 FSDGT-Q-AVSGGKDFSVKVWDLSQKAVLKSYNAH----------SSEVNCV---AACPGK---DTIFLSCGEDGRILLW 209 (357)
T ss_dssp CSSSS-E-EEEEETTSCEEEEETTTTEEEEEECCC----------SSCEEEE---EECTTC---SSCEEEEETTSCEEEC
T ss_pred CCCCC-E-EEEEeCCCeEEEEECCCCcEEEEEcCC----------CCCEEEE---EEccCC---CceeeeeccCCceEEE
Confidence 34443 3 455677899999999999887776532 1222222 244432 2247889999999999
Q ss_pred eCCCCCCceee--eeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC-cE
Q 016769 246 DIRNPGIPLTA--MKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KI 321 (383)
Q Consensus 246 dl~~~~~~~~~--~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-~~ 321 (383)
|++++.. ... ...|...+.++.|+|++. .+++|+.|+.|++||+...... ..+..+...|++++|+|++ ++
T Consensus 210 d~~~~~~-~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~----~~~~~~~~~v~~l~~sp~~~~~ 284 (357)
T 4g56_B 210 DTRKPKP-ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSA----QTSAVHSQNITGLAYSYHSSPF 284 (357)
T ss_dssp CTTSSSC-BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGC----EEECCCSSCEEEEEECSSSSCC
T ss_pred ECCCCce-eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEe----EEEeccceeEEEEEEcCCCCCE
Confidence 9987543 322 334667899999998754 5778999999999999765432 2344566789999999987 58
Q ss_pred EEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeC-CCCEEEEEeCCCcEEEEeCC
Q 016769 322 AATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS-DCKLMASASEDSTVALWELY 379 (383)
Q Consensus 322 l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~sp-d~~~las~s~d~~i~~w~~~ 379 (383)
||+|+.|++|+|||+++++.+..+ +|...|.+++||| |+++|||||.|++|++|++.
T Consensus 285 lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 285 LASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp EEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 999999999999999999877655 7999999999999 78999999999999999995
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.3e-38 Score=283.80 Aligned_cols=292 Identities=16% Similarity=0.265 Sum_probs=209.7
Q ss_pred CeeeeeecCCceeeEEEeCCC-CeEEEecCCCeEEEeeCcccc-----cccccccccccceeeeeeecCCCCcceeEecc
Q 016769 10 PVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHR-----TVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~-~~L~sgs~D~~v~vW~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 83 (383)
+..+|+||++.|++|+|+|++ ++|+|||.|++|++|++.... ++..+..|. ..+.++.+++ ++.+|++++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~--~~v~~~~~s~--dg~~l~s~s 84 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHS--HIVQDCTLTA--DGAYALSAS 84 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCS--SCEEEEEECT--TSSEEEEEE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCc--ccEEEEEECC--CCCEEEEEe
Confidence 456899999999999999965 799999999999999986432 222333343 4678888988 468999999
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.|++|++||+++++... .+..+. ..+. ..
T Consensus 85 ~D~~v~~wd~~~~~~~~----~~~~h~----------------------~~v~-------------------------~~ 113 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQ----RFVGHK----------------------SDVM-------------------------SV 113 (319)
T ss_dssp TTSEEEEEETTTTEEEE----EEECCS----------------------SCEE-------------------------EE
T ss_pred CCCEEEEEECCCCCeeE----EEccCC----------------------CcEE-------------------------EE
Confidence 99999999998764210 100000 0000 01
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCC--CCceEEEEEeCCCc
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS--QGFVNVLAGYEDGS 241 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~sg~~dg~ 241 (383)
.+.+++. ++++|+.|++|++||++.. ++..+..+ .....++ .+.|... .+...+++++.|++
T Consensus 114 ~~~~~~~--~l~s~s~D~~i~vwd~~~~-~~~~~~~h----------~~~v~~~---~~~~~~~~~~~~~~l~s~~~d~~ 177 (319)
T 3frx_A 114 DIDKKAS--MIISGSRDKTIKVWTIKGQ-CLATLLGH----------NDWVSQV---RVVPNEKADDDSVTIISAGNDKM 177 (319)
T ss_dssp EECTTSC--EEEEEETTSCEEEEETTSC-EEEEECCC----------SSCEEEE---EECCC------CCEEEEEETTSC
T ss_pred EEcCCCC--EEEEEeCCCeEEEEECCCC-eEEEEecc----------CCcEEEE---EEccCCCCCCCccEEEEEeCCCE
Confidence 1223332 4556778999999999643 34444321 1111222 2333211 11235889999999
Q ss_pred EEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcE
Q 016769 242 ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 321 (383)
Q Consensus 242 i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 321 (383)
|++||+++. .....+.+|..+|.+++|+|++..+++++.|+.|++||+.... ... .+. ....+.+++|+|++.+
T Consensus 178 i~~wd~~~~-~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~--~~~--~~~-~~~~v~~~~~sp~~~~ 251 (319)
T 3frx_A 178 VKAWNLNQF-QIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK--AMY--TLS-AQDEVFSLAFSPNRYW 251 (319)
T ss_dssp EEEEETTTT-EEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE--EEE--EEE-CCSCEEEEEECSSSSE
T ss_pred EEEEECCcc-hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEE--Eec-CCCcEEEEEEcCCCCE
Confidence 999999874 4456678899999999999999999999999999999997543 222 222 2357999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCceEEEec--------ccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 322 AATAGWDRRVRIYNYRKGSALAILK--------YHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 322 l~s~~~dg~i~iwd~~~~~~~~~~~--------~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+++++.+ .+++|+++....+..+. .|...+.+++|+|||++|++|+.|+.|++||+.
T Consensus 252 la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 252 LAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp EEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 9887754 59999998877665553 356678999999999999999999999999984
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=289.21 Aligned_cols=290 Identities=15% Similarity=0.188 Sum_probs=203.8
Q ss_pred eecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccc----ccccc-----cccccccceeeeeeecCCCCcceeEecccC
Q 016769 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH----RTVSS-----SWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 15 ~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
..|...|.+++|+|||++|++++ |+++|+||.... ..... ........++.+++|+++ +.+++++.|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d---~~l~~~s~d 102 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE---RGILVASDS 102 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT---TEEEEEETT
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC---CeEEEEECC
Confidence 46788899999999999999887 778899973211 00000 001111235788999873 689999999
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
++|++||+++++........... +. .. .....+
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~-------------H~---------~~-------------------------V~~v~~ 135 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYE-------------HD---------DI-------------------------VSTVSV 135 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEEC-------------CS---------SC-------------------------EEEEEE
T ss_pred CEEEEEeccCCCceeEeeccccC-------------CC---------CC-------------------------EEEEEE
Confidence 99999999887532100000000 00 00 001123
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 245 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w 245 (383)
+++++ ++++|+.|++|++||+++++.+..+..+ ...+.++ .|.+.. ...+++|+.|++|++|
T Consensus 136 spdg~--~l~sgs~d~~i~iwd~~~~~~~~~~~~h----------~~~V~~~---~~~~~~---~~~l~s~s~D~~v~iw 197 (344)
T 4gqb_B 136 LSSGT--QAVSGSKDICIKVWDLAQQVVLSSYRAH----------AAQVTCV---AASPHK---DSVFLSCSEDNRILLW 197 (344)
T ss_dssp CTTSS--EEEEEETTSCEEEEETTTTEEEEEECCC----------SSCEEEE---EECSSC---TTEEEEEETTSCEEEE
T ss_pred CCCCC--EEEEEeCCCeEEEEECCCCcEEEEEcCc----------CCceEEE---EecCCC---CCceeeeccccccccc
Confidence 34443 3456677899999999999887777532 1223332 244432 2257899999999999
Q ss_pred eCCCCCCceeeee--ccccCeEEEEEeCCC-CceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC-cE
Q 016769 246 DIRNPGIPLTAMK--VHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KI 321 (383)
Q Consensus 246 dl~~~~~~~~~~~--~h~~~v~~~~~~~~~-~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-~~ 321 (383)
|++++. +...+. .|...+.++.|++.+ ..+++|+.|+.|++||++..... ..+..+...|++++|+|++ ++
T Consensus 198 d~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~----~~~~~h~~~v~~v~fsp~g~~~ 272 (344)
T 4gqb_B 198 DTRCPK-PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV----LSSAVHSQCVTGLVFSPHSVPF 272 (344)
T ss_dssp ETTSSS-CEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC----EEEECCSSCEEEEEECSSSSCC
T ss_pred cccccc-eeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE----EEEcCCCCCEEEEEEccCCCeE
Confidence 998754 344443 455678999998855 45688999999999999754332 2345677889999999998 58
Q ss_pred EEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 322 AATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 322 l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
|++|+.|++|+|||+.+++.+ .+.+|.+.|.+++|||+++ +|+|||.|++|++|++.
T Consensus 273 lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 273 LASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 999999999999999988755 5789999999999999987 67899999999999985
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-38 Score=287.26 Aligned_cols=303 Identities=16% Similarity=0.200 Sum_probs=214.3
Q ss_pred CCeeeeeecCC-ceeeEEEeCCCCeEEEecCCCeEEEeeCccccccccc-ccccccceeeeeeecCCCCcceeEecccCC
Q 016769 9 DPVAVLRGHRA-SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSS-WVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (383)
Q Consensus 9 ~~~~~l~gH~~-~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ 86 (383)
..+.+|.+|.+ .|++|+|+|+|++|+||+.|++|+|||+.++...... ....+...+.+++|+| ++++|++++.|+
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp--~g~~l~s~s~D~ 83 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP--CGNYLASASFDA 83 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT--TSSEEEEEETTS
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC--CCCEEEEEECCC
Confidence 45678999998 9999999999999999999999999998765422111 1112234688999998 468999999999
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
++++||++++.. ..+ ..+ .... .. .....+.
T Consensus 84 ~v~iw~~~~~~~-----~~~---------~~~-~~h~---------~~-------------------------v~~v~~s 114 (345)
T 3fm0_A 84 TTCIWKKNQDDF-----ECV---------TTL-EGHE---------NE-------------------------VKSVAWA 114 (345)
T ss_dssp CEEEEEECCC-E-----EEE---------EEE-CCCS---------SC-------------------------EEEEEEC
T ss_pred cEEEEEccCCCe-----EEE---------EEc-cCCC---------CC-------------------------ceEEEEe
Confidence 999999875421 000 000 0000 00 0011233
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCee---eEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERC---TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
+++. + +++++.|++|++||++++... ..+.. +...+.+ ..+.|+. ..+++|+.|++|+
T Consensus 115 p~~~-~-l~s~s~D~~v~iwd~~~~~~~~~~~~~~~----------h~~~v~~---~~~~p~~----~~l~s~s~d~~i~ 175 (345)
T 3fm0_A 115 PSGN-L-LATCSRDKSVWVWEVDEEDEYECVSVLNS----------HTQDVKH---VVWHPSQ----ELLASASYDDTVK 175 (345)
T ss_dssp TTSS-E-EEEEETTSCEEEEEECTTSCEEEEEEECC----------CCSCEEE---EEECSSS----SCEEEEETTSCEE
T ss_pred CCCC-E-EEEEECCCeEEEEECCCCCCeEEEEEecC----------cCCCeEE---EEECCCC----CEEEEEeCCCcEE
Confidence 4443 3 455677899999999876532 22221 1112222 2355542 2588999999999
Q ss_pred EEeCCCCC-CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCe-----------eEEeeee-ecCCCCe
Q 016769 244 VWDIRNPG-IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGS-----------CVIKKEI-NLERPGI 310 (383)
Q Consensus 244 ~wdl~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~-----------~~~~~~~-~~~~~~i 310 (383)
+||++... .+...+.+|..+|.+++|++++..+++++.|++|++||+...... ....... ..+...|
T Consensus 176 ~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 255 (345)
T 3fm0_A 176 LYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTI 255 (345)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCE
T ss_pred EEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcE
Confidence 99987643 234677899999999999999999999999999999997432110 0001111 2255679
Q ss_pred EEEEECCCCcEEEEEeCCCcEEEEEcCCCc---------eEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCCC
Q 016769 311 SGTSIRPDSKIAATAGWDRRVRIYNYRKGS---------ALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELYP 380 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~~ 380 (383)
.+++|+|++.++++++.|++|++|+...+. ......+|...|.+|+|+|+++ +|||||.||+|++|++..
T Consensus 256 ~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 256 YDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp EEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred EEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 999999999999999999999999997542 1123468999999999999985 999999999999999864
Q ss_pred C
Q 016769 381 P 381 (383)
Q Consensus 381 ~ 381 (383)
+
T Consensus 336 ~ 336 (345)
T 3fm0_A 336 P 336 (345)
T ss_dssp -
T ss_pred C
Confidence 4
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5e-37 Score=277.40 Aligned_cols=292 Identities=20% Similarity=0.269 Sum_probs=216.1
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
+..++.||.+.|++++|+|++++|++|+.|+.|++|+..+++....+..|. ..+.++++++ +++.|++++.|++|+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--LGISDVAWSS--DSNLLVSASDDKTLK 90 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS--SCEEEEEECT--TSSEEEEEETTSEEE
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCC--CceEEEEEcC--CCCEEEEECCCCEEE
Confidence 456789999999999999999999999999999999998777665554443 4578899988 468999999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+||+++++.. ..+..+.. .+ ....+.+++
T Consensus 91 vwd~~~~~~~----~~~~~~~~----------------------~v-------------------------~~~~~~~~~ 119 (312)
T 4ery_A 91 IWDVSSGKCL----KTLKGHSN----------------------YV-------------------------FCCNFNPQS 119 (312)
T ss_dssp EEETTTCCEE----EEEECCSS----------------------CE-------------------------EEEEECSSS
T ss_pred EEECCCCcEE----EEEcCCCC----------------------CE-------------------------EEEEEcCCC
Confidence 9999876421 11100000 00 001122333
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
. + +++++.++.|++||+++++.+..+..+. ....++ .+.++. ..+++|+.|+.|++||+++
T Consensus 120 ~-~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~----------~~v~~~---~~~~~~----~~l~~~~~d~~i~~wd~~~ 180 (312)
T 4ery_A 120 N-L-IVSGSFDESVRIWDVKTGKCLKTLPAHS----------DPVSAV---HFNRDG----SLIVSSSYDGLCRIWDTAS 180 (312)
T ss_dssp S-E-EEEEETTSCEEEEETTTCCEEEEECCCS----------SCEEEE---EECTTS----SEEEEEETTSCEEEEETTT
T ss_pred C-E-EEEEeCCCcEEEEECCCCEEEEEecCCC----------CcEEEE---EEcCCC----CEEEEEeCCCcEEEEECCC
Confidence 2 3 4556778999999999988776664321 112222 244432 3688999999999999987
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC---CeEEEEECCCCcEEEEEe
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP---GISGTSIRPDSKIAATAG 326 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~s~~ 326 (383)
..........+..++..+.|++++..+++++.|+.|++||+.... ... ....+.. .+......++++++++|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~l~sg~ 256 (312)
T 4ery_A 181 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK--CLK--TYTGHKNEKYCIFANFSVTGGKWIVSGS 256 (312)
T ss_dssp CCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE--EEE--EECSSCCSSSCCCEEEECSSSCEEEECC
T ss_pred CceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc--EEE--EEEecCCceEEEEEEEEeCCCcEEEEEC
Confidence 543223334566789999999999999999999999999997543 222 1222222 123333457889999999
Q ss_pred CCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEe--CCCcEEEEeCC
Q 016769 327 WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASAS--EDSTVALWELY 379 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s--~d~~i~~w~~~ 379 (383)
.||+|++||+.+++.+..+.+|...|.+++|+|++++|++++ .|++|++|+..
T Consensus 257 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 257 EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999999999999999999999999999999997 69999999963
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=9e-38 Score=308.17 Aligned_cols=349 Identities=15% Similarity=0.203 Sum_probs=222.1
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccccccccc-----ccccceeeeeeecCCCCcceeEecc
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-----HSAAHGIVSVATGPSIGLNKVISQG 83 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~s~~ 83 (383)
+...+|.+|++.|++++|+||+++|+||+.|++|+|||..++++...+.. ..+...+.+++|+| ++.+|+|++
T Consensus 181 ~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp--dg~~l~s~s 258 (611)
T 1nr0_A 181 KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP--DGTKIASAS 258 (611)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT--TSSEEEEEE
T ss_pred eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC--CCCEEEEEe
Confidence 44568899999999999999999999999999999999887766544321 01224688999998 468999999
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCcee-eeeEEee-ccccccccccCCCCccceeccCcccccCccccccccCCccce
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYH-FCKLSLV-KEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEI 161 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (383)
.|++|++||+++++... .+...... ....... ...........+....+....+... .. ...+. ....
T Consensus 259 ~D~~v~lWd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~-~~-~~gh~----~~v~ 328 (611)
T 1nr0_A 259 ADKTIKIWNVATLKVEK----TIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSID-QV-RYGHN----KAIT 328 (611)
T ss_dssp TTSEEEEEETTTTEEEE----EEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEE-EE-ECCCS----SCEE
T ss_pred CCCeEEEEeCCCCceee----eecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcc-eE-EcCCC----CCEE
Confidence 99999999998764321 11111000 0000000 0000000000000011111100000 00 00000 0111
Q ss_pred ecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccC-c-CCCCC---------------------------------
Q 016769 162 IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQN-S-CGGSP--------------------------------- 206 (383)
Q Consensus 162 ~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~-~-~~~s~--------------------------------- 206 (383)
...++++++ ++ ++++.|++|++||++++.....+... . .+.++
T Consensus 329 ~l~~spdg~-~l-~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~ 406 (611)
T 1nr0_A 329 ALSSSADGK-TL-FSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV 406 (611)
T ss_dssp EEEECTTSS-EE-EEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCC
T ss_pred EEEEeCCCC-EE-EEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccccccee
Confidence 123445554 34 45667899999999887654332110 0 00000
Q ss_pred -----------CcCCCCCcee-----------------------eEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 207 -----------NFSSKGRGMC-----------------------MAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 207 -----------~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
.+++.+.... .....|.|+ ...+++|+.|++|++||++....
T Consensus 407 ~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spd----g~~lasgs~D~~v~lwd~~~~~~ 482 (611)
T 1nr0_A 407 ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSND----KQFVAVGGQDSKVHVYKLSGASV 482 (611)
T ss_dssp EEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTT----SCEEEEEETTSEEEEEEEETTEE
T ss_pred eeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCC----CCEEEEeCCCCeEEEEEccCCce
Confidence 0001110000 001123343 23688999999999999976322
Q ss_pred -ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcE
Q 016769 253 -PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRV 331 (383)
Q Consensus 253 -~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i 331 (383)
.... ..|...|.+++|+|++..+++++.|++|++||+... ...........|...|.+++|+||+++||+|+.|++|
T Consensus 483 ~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~-~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v 560 (611)
T 1nr0_A 483 SEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN-FELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV 560 (611)
T ss_dssp EEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT-TEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCC-CceeeeeeeeecccceeEEEECCCCCEEEEEECCCcE
Confidence 1233 678999999999999999999999999999998742 1111110123367789999999999999999999999
Q ss_pred EEEEcCCCc-eE-EEeccc-ccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 332 RIYNYRKGS-AL-AILKYH-HATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 332 ~iwd~~~~~-~~-~~~~~h-~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
++||+.++. .. ..+.+| ...|.+++|+||++ |++|+.|++|++|++
T Consensus 561 ~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 561 IVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp EEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred EEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 999998765 33 567789 89999999999998 999999999999998
No 13
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-37 Score=288.56 Aligned_cols=291 Identities=20% Similarity=0.285 Sum_probs=212.9
Q ss_pred eecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccc----------------cceeeeeeecCCCCcce
Q 016769 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA----------------AHGIVSVATGPSIGLNK 78 (383)
Q Consensus 15 ~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~ 78 (383)
.+|.+.|++++|+|||++|++|+ |+++++|++.+++.+..+..+.. ...+.+++|++ ++..
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~--dg~~ 137 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP--DGKF 137 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT--TSSE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC--CCCE
Confidence 47999999999999999999987 78999999988766544332211 11367889988 4689
Q ss_pred eEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCc
Q 016769 79 VISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRS 158 (383)
Q Consensus 79 l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (383)
|++++.|++|++||+++++.. ..+..+ . ..+
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~----~~~~~h-------------~---------~~v----------------------- 168 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIV----MILQGH-------------E---------QDI----------------------- 168 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEE----EEECCC-------------S---------SCE-----------------------
T ss_pred EEEEcCCCeEEEEECCCCcEE----EEEccC-------------C---------CCE-----------------------
Confidence 999999999999999875311 000000 0 000
Q ss_pred cceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeC
Q 016769 159 FEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 238 (383)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~ 238 (383)
....+.+++. ++ ++++.|++|++||+++++....+... ....++ .+.|. +...+++|+.
T Consensus 169 --~~~~~~p~~~-~l-~s~s~d~~v~iwd~~~~~~~~~~~~~-----------~~v~~~---~~~~~---~~~~l~~~s~ 227 (393)
T 1erj_A 169 --YSLDYFPSGD-KL-VSGSGDRTVRIWDLRTGQCSLTLSIE-----------DGVTTV---AVSPG---DGKYIAAGSL 227 (393)
T ss_dssp --EEEEECTTSS-EE-EEEETTSEEEEEETTTTEEEEEEECS-----------SCEEEE---EECST---TCCEEEEEET
T ss_pred --EEEEEcCCCC-EE-EEecCCCcEEEEECCCCeeEEEEEcC-----------CCcEEE---EEECC---CCCEEEEEcC
Confidence 0011234443 33 45667899999999998876555321 111121 24442 1236889999
Q ss_pred CCcEEEEeCCCCCCceeee-------eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCee--------EEeeee
Q 016769 239 DGSILVWDIRNPGIPLTAM-------KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC--------VIKKEI 303 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~--------~~~~~~ 303 (383)
|++|++||+++.. .+..+ .+|...|.++.|++++..+++++.|+.|++||+....... ......
T Consensus 228 d~~v~iwd~~~~~-~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~ 306 (393)
T 1erj_A 228 DRAVRVWDSETGF-LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTY 306 (393)
T ss_dssp TSCEEEEETTTCC-EEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEE
T ss_pred CCcEEEEECCCCc-EEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEE
Confidence 9999999998743 33333 5688999999999999999999999999999997532110 111223
Q ss_pred ecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeC------CCCEEEEEeCCCcEEEEe
Q 016769 304 NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS------DCKLMASASEDSTVALWE 377 (383)
Q Consensus 304 ~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~sp------d~~~las~s~d~~i~~w~ 377 (383)
..+...+.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+| ++++||+||.|++|++|+
T Consensus 307 ~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 307 IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp ECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred ecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence 45667899999999999999999999999999999999999999999999999986 688999999999999999
Q ss_pred CC
Q 016769 378 LY 379 (383)
Q Consensus 378 ~~ 379 (383)
+.
T Consensus 387 ~~ 388 (393)
T 1erj_A 387 YK 388 (393)
T ss_dssp EE
T ss_pred cc
Confidence 84
No 14
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.3e-36 Score=277.19 Aligned_cols=293 Identities=17% Similarity=0.280 Sum_probs=209.4
Q ss_pred CeeeeeecCCceeeEEEeCC-CCeEEEecCCCeEEEeeCcccccc-----cccccccccceeeeeeecCCCCcceeEecc
Q 016769 10 PVAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTV-----SSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~-~~~L~sgs~D~~v~vW~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 83 (383)
...+|+||++.|++|+|+|+ +++|+|||.|++|+|||+.+.+.. ..+..| ...+.++.+++ ++..|++++
T Consensus 30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h--~~~V~~~~~s~--dg~~l~s~~ 105 (340)
T 4aow_A 30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGH--SHFVSDVVISS--DGQFALSGS 105 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCC--SSCEEEEEECT--TSSEEEEEE
T ss_pred EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCC--CCCEEEEEECC--CCCEEEEEc
Confidence 44579999999999999998 689999999999999998765432 222233 34688899988 468999999
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.|++|++|+........ .. .. ... .....
T Consensus 106 ~d~~i~~~~~~~~~~~~----~~------------~~-~~~----------------------------------~~~~~ 134 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTR----RF------------VG-HTK----------------------------------DVLSV 134 (340)
T ss_dssp TTSEEEEEETTTTEEEE----EE------------EC-CSS----------------------------------CEEEE
T ss_pred ccccceEEeecccceee----ee------------cC-CCC----------------------------------ceeEE
Confidence 99999999987652100 00 00 000 00000
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
...+.+ .+ +++++.|+.+++||+........... .+.....+. .+.+.. ....+++++.|+.|+
T Consensus 135 ~~~~~~-~~-l~s~s~d~~~~~~d~~~~~~~~~~~~---------~~~~~v~~~---~~~~~~--~~~~~~s~~~d~~i~ 198 (340)
T 4aow_A 135 AFSSDN-RQ-IVSGSRDKTIKLWNTLGVCKYTVQDE---------SHSEWVSCV---RFSPNS--SNPIIVSCGWDKLVK 198 (340)
T ss_dssp EECTTS-SC-EEEEETTSCEEEECTTSCEEEEECSS---------SCSSCEEEE---EECSCS--SSCEEEEEETTSCEE
T ss_pred EEeecC-cc-ceeecCCCeEEEEEeCCCceEEEEec---------cccCcccce---EEccCC--CCcEEEEEcCCCEEE
Confidence 111222 23 34566789999999877654322211 011111111 233332 123578899999999
Q ss_pred EEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEE
Q 016769 244 VWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAA 323 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~ 323 (383)
+||+++. .....+.+|..+|.+++|++++..+++++.|+.|++||+.... ... ... ....+..+.|+|++.+ +
T Consensus 199 i~d~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~--~~~--~~~-~~~~v~~~~~~~~~~~-~ 271 (340)
T 4aow_A 199 VWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLY--TLD-GGDIINALCFSPNRYW-L 271 (340)
T ss_dssp EEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE--EEE--EEE-CSSCEEEEEECSSSSE-E
T ss_pred EEECCCC-ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc--eee--eec-CCceEEeeecCCCCce-e
Confidence 9999874 4567788999999999999999999999999999999997543 221 222 2357999999998865 4
Q ss_pred EEeCCCcEEEEEcCCCceEEEe---------cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 324 TAGWDRRVRIYNYRKGSALAIL---------KYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 324 s~~~dg~i~iwd~~~~~~~~~~---------~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+++.|++|++||++.+..+..+ .+|...|.+++|+|||++||+|+.||.|+|||+..
T Consensus 272 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 272 CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 5677999999999887665544 36888999999999999999999999999999864
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=276.71 Aligned_cols=306 Identities=16% Similarity=0.202 Sum_probs=205.0
Q ss_pred CCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc--cccccccccccceeeeeeecCCCCcceeEeccc
Q 016769 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (383)
Q Consensus 7 ~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (383)
..+++.+|.+|++.|++++|+|+ +|+||+.|++|++||+..+. ....+....+...+.+++|+| ++..|++++.
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp--~~~~las~s~ 78 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP--HTSLLAAGSF 78 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT--TSSEEEEEET
T ss_pred ccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECC--CCCEEEEEeC
Confidence 44567899999999999999998 99999999999999987642 222221111234688999998 4688999999
Q ss_pred CCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
|++|++||+++..........+ ....... . ......
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~----------~~~~~h~---------~-------------------------~V~~v~ 114 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLL----------AIIEGHE---------N-------------------------EVKGVA 114 (330)
T ss_dssp TSCEEEEEC-------CCCEEE----------EEEC--------------------------------------CEEEEE
T ss_pred CCcEEEEEcccCcCccccceeE----------EEEcCCC---------C-------------------------cEEEEE
Confidence 9999999986431100000000 0000000 0 000112
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCC-C---eeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTA-E---RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 240 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~-~---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg 240 (383)
+++++. + +++++.|++|++||++.. . ++..+..+ ...+.++ .|.|+. ..+++|+.|+
T Consensus 115 ~sp~g~-~-las~s~D~~v~iwd~~~~~~~~~~~~~~~~h----------~~~v~~v---~~~p~~----~~l~s~s~D~ 175 (330)
T 2hes_X 115 WSNDGY-Y-LATCSRDKSVWIWETDESGEEYECISVLQEH----------SQDVKHV---IWHPSE----ALLASSSYDD 175 (330)
T ss_dssp ECTTSC-E-EEEEETTSCEEEEECCTTCCCCEEEEEECCC----------SSCEEEE---EECSSS----SEEEEEETTS
T ss_pred ECCCCC-E-EEEEeCCCEEEEEeccCCCCCeEEEEEeccC----------CCceEEE---EECCCC----CEEEEEcCCC
Confidence 334443 3 455677899999999532 2 23333321 1122222 355542 3688999999
Q ss_pred cEEEEeCCCCC-CceeeeeccccCeEEEEEeCC--CCceEEEEcCCcEEEEEccCCCC--ee--EEeeeee-cCCCCeEE
Q 016769 241 SILVWDIRNPG-IPLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLYNLDHSTG--SC--VIKKEIN-LERPGISG 312 (383)
Q Consensus 241 ~i~~wdl~~~~-~~~~~~~~h~~~v~~~~~~~~--~~~~~s~~~d~~i~~wdl~~~~~--~~--~~~~~~~-~~~~~i~~ 312 (383)
+|++||++... .++..+.+|..+|.++.|+++ +..+++++.|++|++||+..... .. .....+. .+...|.+
T Consensus 176 ~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (330)
T 2hes_X 176 TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYN 255 (330)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEE
T ss_pred eEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEE
Confidence 99999987532 356778899999999999987 55789999999999999864311 00 1111222 25678999
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCCCc--eEE-Eeccccc-ceeEEEEeC--CCCEEEEEeCCCcEEEEeCCC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRKGS--ALA-ILKYHHA-TCNAVSFSS--DCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~~~--~~~-~~~~h~~-~v~~v~~sp--d~~~las~s~d~~i~~w~~~~ 380 (383)
++|++++ +|++++.||+|++||..+++ ... .+.+|.. .|.+++|+| ++++||+||.|++|+|||+..
T Consensus 256 v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 256 VAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 9999765 88999999999999998774 333 3357887 899999999 789999999999999999864
No 16
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5e-37 Score=283.89 Aligned_cols=301 Identities=12% Similarity=0.090 Sum_probs=203.0
Q ss_pred CCceeeEEEeCCCCeEEEecCCC-------eEEEeeCccccccccc--------ccccccceeeeeeecCC-------CC
Q 016769 18 RASVTDVCFHQTKPILFAGTTGG-------ELRIWDTVQHRTVSSS--------WVHSAAHGIVSVATGPS-------IG 75 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~-------~v~vW~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-------~~ 75 (383)
.-+|++++|+||+++|++||.|. .|++|++......... ........+.++++... .+
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 45899999999999999998754 5999998654321110 00011122344444321 11
Q ss_pred cceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCcccccccc
Q 016769 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKES 155 (383)
Q Consensus 76 ~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (383)
...+++++.|+++|+|++++... ... ........ ......
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~----~~~---------~~~~~~~~-----~~~~~~---------------------- 133 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVND----QLE---------FLTSVDFD-----ASTNAD---------------------- 133 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTT----EEE---------EEEEECSS-----CCCCTT----------------------
T ss_pred ccEEEEecCCCcEEEEEecCCCc----eEE---------Eeeeecee-----ecCCcc----------------------
Confidence 23455667788899998865421 000 00000000 000000
Q ss_pred CCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEE
Q 016769 156 NRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 235 (383)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 235 (383)
...-...++++|+..++++++.|++||+||+++++++..+.... .+..+ .|.|+. ..+++
T Consensus 134 --~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~-----------~V~~v---~fspdg----~~l~s 193 (365)
T 4h5i_A 134 --DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRG-----------EVKDL---HFSTDG----KVVAY 193 (365)
T ss_dssp --CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSS-----------CCCEE---EECTTS----SEEEE
T ss_pred --cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCC-----------ceEEE---EEccCC----ceEEe
Confidence 00112345677765556677789999999999998877665321 12222 355542 24666
Q ss_pred EeCCCcEEEEeCCCCCCc-eeeeeccccCeEEEEEeCCCCceEEEEcCC----cEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 236 GYEDGSILVWDIRNPGIP-LTAMKVHLEPVLCLSIDESCNGGISGGADQ----KIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 236 g~~dg~i~~wdl~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~----~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
++. +.+++|+..+.... ......|...|.++.|++++..+++++.|+ .+++|++...............+...|
T Consensus 194 ~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V 272 (365)
T 4h5i_A 194 ITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGI 272 (365)
T ss_dssp ECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCE
T ss_pred ccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCe
Confidence 664 55666666654432 234456888999999999999999998887 577888865543333334455677789
Q ss_pred EEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe-cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 311 SGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++++|+||+++||+|+.|++|+|||+.+++++..+ .+|...|.+|+|||||++|||||.|++|+|||+.
T Consensus 273 ~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 273 TSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred EeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 99999999999999999999999999999998875 7899999999999999999999999999999994
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.3e-36 Score=273.72 Aligned_cols=296 Identities=18% Similarity=0.257 Sum_probs=206.4
Q ss_pred CCeeeeeecCCceeeEEE-----eC-CCCeEEEecCCCeEEEeeCcccc-------cccccccccccceeeeeeecCCCC
Q 016769 9 DPVAVLRGHRASVTDVCF-----HQ-TKPILFAGTTGGELRIWDTVQHR-------TVSSSWVHSAAHGIVSVATGPSIG 75 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f-----~~-~~~~L~sgs~D~~v~vW~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 75 (383)
....+|+||++.|++|+| ++ ++++|+|||.|++|++||+.+.. +...+..|. ..+.++++++ +
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~--~~V~~~~~~~--~ 87 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHN--HFVSDLALSQ--E 87 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCS--SCEEEEEECS--S
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCC--CceEEEEECC--C
Confidence 356789999999999999 76 89999999999999999986432 122233333 4578889988 4
Q ss_pred cceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCcccccccc
Q 016769 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKES 155 (383)
Q Consensus 76 ~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (383)
+..+++++.|++|++||++++... ..+..+. ..
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~~----~~~~~h~----------------------~~--------------------- 120 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTTY----KRFVGHQ----------------------SE--------------------- 120 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCEE----EEEECCC----------------------SC---------------------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEE----EEEcCCC----------------------Cc---------------------
Confidence 678999999999999999876421 0110000 00
Q ss_pred CCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCC------C
Q 016769 156 NRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ------G 229 (383)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~------~ 229 (383)
.....+.+++. ++ ++++.|++|++||+..... ...... ..+.....++ .|.|.... .
T Consensus 121 ----v~~v~~sp~~~-~l-~s~~~d~~i~~wd~~~~~~-~~~~~~-------~~~~~~v~~~---~~~~~~~~~~~~~~~ 183 (343)
T 2xzm_R 121 ----VYSVAFSPDNR-QI-LSAGAEREIKLWNILGECK-FSSAEK-------ENHSDWVSCV---RYSPIMKSANKVQPF 183 (343)
T ss_dssp ----EEEEEECSSTT-EE-EEEETTSCEEEEESSSCEE-EECCTT-------TSCSSCEEEE---EECCCCCSCSCCCSS
T ss_pred ----EEEEEECCCCC-EE-EEEcCCCEEEEEeccCCce-eeeecc-------cCCCceeeee---eeccccccccccCCC
Confidence 00012334443 33 4556789999999974332 222110 0111112222 23332110 0
Q ss_pred ceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 230 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 230 ~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
...+++++.|++|++||.+ ......+..|..+|.+++|++++..+++++.|+.|++||+........ .. .....
T Consensus 184 ~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~---~~-~~~~~ 257 (343)
T 2xzm_R 184 APYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR---EF-DAGST 257 (343)
T ss_dssp CCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE---EE-ECSSC
T ss_pred CCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce---ee-cCCCc
Confidence 1358899999999999954 344567788999999999999999999999999999999953322111 11 12346
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEE--Eec-----------ccccceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA--ILK-----------YHHATCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~-----------~h~~~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
+.+++|+|+++++++ +.|+.|++||+.+++... .+. +|...|.+++|+|+|++|++|+.||+|++|
T Consensus 258 v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w 336 (343)
T 2xzm_R 258 INQIAFNPKLQWVAV-GTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTF 336 (343)
T ss_dssp EEEEEECSSSCEEEE-EESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEE
T ss_pred EEEEEECCCCCEEEE-ECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEE
Confidence 999999999988765 568889999998765432 333 688899999999999999999999999999
Q ss_pred eCC
Q 016769 377 ELY 379 (383)
Q Consensus 377 ~~~ 379 (383)
++.
T Consensus 337 ~~~ 339 (343)
T 2xzm_R 337 SFE 339 (343)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
No 18
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.9e-35 Score=264.31 Aligned_cols=259 Identities=17% Similarity=0.222 Sum_probs=190.7
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccc--ccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH--RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
+.++.+|.+.|++++|+|+|++||||+.|++|+|||+.+. +++..+..|. ..+.+++|.+..++..|+|++.|++|
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~--~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHE--GPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCS--SCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcccc--CCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 3568899999999999999999999999999999998643 4444554454 45788888753235789999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||++++.... ...+
T Consensus 80 ~iWd~~~~~~~~--~~~~-------------------------------------------------------------- 95 (297)
T 2pm7_B 80 MIWKEENGRWSQ--IAVH-------------------------------------------------------------- 95 (297)
T ss_dssp EEEEBSSSCBCC--CEEE--------------------------------------------------------------
T ss_pred EEEEcCCCceEE--EEEe--------------------------------------------------------------
Confidence 999997652100 0000
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
.+ ....|+ ++ .|.|... ...+++|+.|++|++||++
T Consensus 96 -------~~-h~~~v~-------------------------------~v---~~~p~~~--g~~l~s~s~d~~v~~wd~~ 131 (297)
T 2pm7_B 96 -------AV-HSASVN-------------------------------SV---QWAPHEY--GPMLLVASSDGKVSVVEFK 131 (297)
T ss_dssp -------CC-CSSCEE-------------------------------EE---EECCGGG--CSEEEEEETTSEEEEEEBC
T ss_pred -------ec-CCCcee-------------------------------EE---EeCcCCC--CcEEEEEECCCcEEEEEec
Confidence 00 000000 00 1111100 0146788889999999987
Q ss_pred CCCC-ceeeeeccccCeEEEEEeCC-------------CCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEE
Q 016769 249 NPGI-PLTAMKVHLEPVLCLSIDES-------------CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 249 ~~~~-~~~~~~~h~~~v~~~~~~~~-------------~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~ 314 (383)
+... ....+..|...|.++.|++. +..+++|+.|+.|++||++...........+..|...|.+++
T Consensus 132 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~ 211 (297)
T 2pm7_B 132 ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211 (297)
T ss_dssp SSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred CCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEE
Confidence 6432 23456788889999999876 357899999999999999865443333445566778899999
Q ss_pred ECCCC---cEEEEEeCCCcEEEEEcCCCc---eEEEe--cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 315 IRPDS---KIAATAGWDRRVRIYNYRKGS---ALAIL--KYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 315 ~~p~~---~~l~s~~~dg~i~iwd~~~~~---~~~~~--~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
|+|++ ++||+++.|++|++||++... ....+ ..|...|.+++|+|++++||+++.|+.|+||+..
T Consensus 212 ~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 212 WSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp ECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred ECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 99984 899999999999999997643 12233 4688899999999999999999999999999975
No 19
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-35 Score=268.01 Aligned_cols=298 Identities=17% Similarity=0.230 Sum_probs=222.0
Q ss_pred eeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEe
Q 016769 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~W 91 (383)
.+|.+|++.|++++|+|++++|++|+.|+.|++||+.+++.+..+..|. ..+.++++.+ +++.|++++.|++|++|
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHT--GTIWSIDVDC--FTKYCVTGSADYSIKLW 101 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCS--SCEEEEEECT--TSSEEEEEETTTEEEEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcC--CcEEEEEEcC--CCCEEEEEeCCCeEEEE
Confidence 4689999999999999999999999999999999998887776655443 4578889988 46899999999999999
Q ss_pred ecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCc
Q 016769 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPK 171 (383)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (383)
|+++++... .+. .... + ....+.+++.
T Consensus 102 d~~~~~~~~----~~~-----------~~~~------------v-------------------------~~~~~~~~~~- 128 (369)
T 3zwl_B 102 DVSNGQCVA----TWK-----------SPVP------------V-------------------------KRVEFSPCGN- 128 (369)
T ss_dssp ETTTCCEEE----EEE-----------CSSC------------E-------------------------EEEEECTTSS-
T ss_pred ECCCCcEEE----Eee-----------cCCC------------e-------------------------EEEEEccCCC-
Confidence 998764211 000 0000 0 0011223333
Q ss_pred eeeeccCCc-----ceEEEEecCCCCeeeEeccCcCCC-CCCcCCCC--CceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 172 YMAVAGEQL-----SEVEIWDLNTAERCTRLHQNSCGG-SPNFSSKG--RGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 172 ~~~~~g~~~-----~~i~~Wdl~~~~~~~~~~~~~~~~-s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
+++++ ..+ +.|++||+++......+....... ........ ...++ .+.+. ...+++++.||.|+
T Consensus 129 ~l~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~l~~~~~dg~i~ 200 (369)
T 3zwl_B 129 YFLAI-LDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA---GWSTK----GKYIIAGHKDGKIS 200 (369)
T ss_dssp EEEEE-ECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE---EECGG----GCEEEEEETTSEEE
T ss_pred EEEEe-cCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE---EEcCC----CCEEEEEcCCCEEE
Confidence 33333 334 899999997765322221100000 00000111 11121 24443 23688899999999
Q ss_pred EEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEE
Q 016769 244 VWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAA 323 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~ 323 (383)
+||+++.......+..|..+|.++.|++++..+++++.|+.|++||+........ .. ....+..++|+|++++++
T Consensus 201 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~----~~-~~~~~~~~~~~~~~~~l~ 275 (369)
T 3zwl_B 201 KYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK----YE-TDCPLNTAVITPLKEFII 275 (369)
T ss_dssp EEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE----EE-CSSCEEEEEECSSSSEEE
T ss_pred EEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee----ec-CCCCceeEEecCCCceEE
Confidence 9999875566778888999999999999999999999999999999976442221 12 446799999999999999
Q ss_pred EEeCCC--------------cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 324 TAGWDR--------------RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 324 s~~~dg--------------~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+++.++ .+++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++|++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 276 LGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp EEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred EeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 999998 89999999999999999999999999999999999999999999999985
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.3e-34 Score=285.69 Aligned_cols=294 Identities=16% Similarity=0.186 Sum_probs=213.5
Q ss_pred CCCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccc--cccccccccceeeeeeecCCCCcceeEeccc
Q 016769 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTV--SSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (383)
Q Consensus 7 ~~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (383)
..+...+|.||++.|++++|+|+|++||||+.|++|+|||+.+++.. ..+..| ...+.+++|+| ++..|++++.
T Consensus 48 ~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~--~~~v~~v~fs~--dg~~l~~~~~ 123 (611)
T 1nr0_A 48 SLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVF--SGPVKDISWDS--ESKRIAAVGE 123 (611)
T ss_dssp CSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECS--SSCEEEEEECT--TSCEEEEEEC
T ss_pred CcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeeccc--CCceEEEEECC--CCCEEEEEEC
Confidence 34567789999999999999999999999999999999998654432 222233 34688999998 4678887765
Q ss_pred C----CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccc
Q 016769 85 D----GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFE 160 (383)
Q Consensus 85 D----~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
+ ++|++||..+. .. .+..+. . ..
T Consensus 124 ~~~~~~~v~~wd~~~~--~~----~l~gh~----------------------~-------------------------~v 150 (611)
T 1nr0_A 124 GRERFGHVFLFDTGTS--NG----NLTGQA----------------------R-------------------------AM 150 (611)
T ss_dssp CSSCSEEEEETTTCCB--CB----CCCCCS----------------------S-------------------------CE
T ss_pred CCCceeEEEEeeCCCC--cc----eecCCC----------------------C-------------------------Cc
Confidence 4 47888884221 10 000000 0 00
Q ss_pred eecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC
Q 016769 161 IIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 240 (383)
Q Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg 240 (383)
....+.++++ +++++++.|++|++||.++.+....+..+ ...+.++ .|.|+. ..+++|+.|+
T Consensus 151 ~~v~f~p~~~-~~l~s~s~D~~v~lwd~~~~~~~~~l~~H----------~~~V~~v---~fspdg----~~las~s~D~ 212 (611)
T 1nr0_A 151 NSVDFKPSRP-FRIISGSDDNTVAIFEGPPFKFKSTFGEH----------TKFVHSV---RYNPDG----SLFASTGGDG 212 (611)
T ss_dssp EEEEECSSSS-CEEEEEETTSCEEEEETTTBEEEEEECCC----------SSCEEEE---EECTTS----SEEEEEETTS
T ss_pred eEEEECCCCC-eEEEEEeCCCeEEEEECCCCeEeeeeccc----------cCceEEE---EECCCC----CEEEEEECCC
Confidence 0112334443 34566778999999999887766666432 1222222 355542 3688999999
Q ss_pred cEEEEeCCCCCCceeeee-------ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee-cCCCCeEE
Q 016769 241 SILVWDIRNPGIPLTAMK-------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN-LERPGISG 312 (383)
Q Consensus 241 ~i~~wdl~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~-~~~~~i~~ 312 (383)
+|++||++++. .+..+. +|..+|.+++|+|++..+++++.|++|++||++... ........ ........
T Consensus 213 ~i~lwd~~~g~-~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~--~~~~~~~~~~~~~~~~~ 289 (611)
T 1nr0_A 213 TIVLYNGVDGT-KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK--VEKTIPVGTRIEDQQLG 289 (611)
T ss_dssp CEEEEETTTCC-EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSGGGCEEE
T ss_pred cEEEEECCCCc-EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--eeeeecCCCCccceeEE
Confidence 99999998743 344453 799999999999999999999999999999997543 22211111 11123455
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+.+ +++.+++++.|++|++||...++....+.+|...|.+++|+|||++|++++.|++|++||+..
T Consensus 290 ~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 290 IIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp EEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEE--cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 556 678899999999999999999988888899999999999999999999999999999999853
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.9e-35 Score=284.39 Aligned_cols=325 Identities=21% Similarity=0.345 Sum_probs=222.7
Q ss_pred CCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
.+.+..+.+|...|++++|+|++++|++++.|+.|++||.. ++.+..+..|. ..+.+++++| ++..+++++.|++
T Consensus 252 ~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~--~~v~~~~~~~--~~~~l~t~~~d~~ 326 (577)
T 2ymu_A 252 GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHS--SSVWGVAFSP--DGQTIASASDDKT 326 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCS--SCEEEEEECT--TSSEEEEEETTSC
T ss_pred CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCC--CCeEEEEECC--CCCEEEEEeCCCe
Confidence 34567889999999999999999999999999999999964 34444443443 4578889988 4688999999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccC-CCCccceeccCcccccCccccccccCCccceecccC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQAN-EPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
+++||...... ..+..+........+.......+.... +....+... +... .. ...+. . ......++
T Consensus 327 i~~w~~~~~~~-----~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~~~~-~~-~~~~~---~-~v~~~~~s 394 (577)
T 2ymu_A 327 VKLWNRNGQHL-----QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLL-QT-LTGHS---S-SVRGVAFS 394 (577)
T ss_dssp EEEEETTSCEE-----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-CCEE-EE-EECCS---S-CEEEEEEC
T ss_pred EEEEeCCCCee-----EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-CCEE-EE-ecCCC---C-CeEEEEEC
Confidence 99999865421 111111111111111111000000000 000011100 0000 00 00000 0 01112344
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
++++ ++ ++++.++.|++||. +++.+..+..+ ...+.++ .|.|++ ..+++++.|++|++||
T Consensus 395 ~dg~-~l-~~~~~d~~v~~~~~-~~~~~~~~~~~----------~~~v~~~---~~s~d~----~~l~~~~~d~~v~~w~ 454 (577)
T 2ymu_A 395 PDGQ-TI-ASASDDKTVKLWNR-NGQLLQTLTGH----------SSSVWGV---AFSPDD----QTIASASDDKTVKLWN 454 (577)
T ss_dssp TTSS-CE-EEEETTSEEEEECT-TCCEEEEEECC----------SSCEEEE---EECTTS----SEEEEEETTSEEEEEE
T ss_pred CCCC-EE-EEEeCCCEEEEEeC-CCCEEEEecCC----------CCCeEEE---EECCCC----CEEEEEcCCCEEEEEE
Confidence 5554 44 45567899999996 44545444321 1122222 355542 3688999999999999
Q ss_pred CCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe
Q 016769 247 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG 326 (383)
Q Consensus 247 l~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~ 326 (383)
+.. ..+..+..|..+|.+++|++++..+++++.|+.|++||.+ +... ..+..+...|++++|+|++++|++++
T Consensus 455 ~~~--~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~---~~~~--~~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 455 RNG--QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN---GQLL--QTLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp TTS--CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT---SCEE--EEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred CCC--CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC---CCEE--EEEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 753 4567788999999999999999999999999999999964 2222 34556778899999999999999999
Q ss_pred CCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 327 WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
.||+|++||. +++.+..+.+|...|.+++|+|||++|+|++.|++|++||
T Consensus 528 ~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 528 DDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp TTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9999999996 6888899999999999999999999999999999999997
No 22
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.3e-34 Score=260.96 Aligned_cols=317 Identities=16% Similarity=0.213 Sum_probs=216.2
Q ss_pred CCCCeeeeeecCCceeeEEEeCCCC-eEEEecC---CCeEEEeeCcccccccccccccccceeeeeeecCCC-CcceeEe
Q 016769 7 PPDPVAVLRGHRASVTDVCFHQTKP-ILFAGTT---GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI-GLNKVIS 81 (383)
Q Consensus 7 ~~~~~~~l~gH~~~V~~v~f~~~~~-~L~sgs~---D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s 81 (383)
|.-....+++|.+.|++|+|+|++. +|++|+. |+.|++||+.+++....... .....+.++++.+.. ++..|++
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI-EKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE-EESSCEEEEECTTCCTTTCCEEE
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee-cccCcEEEEEEcCCCCCCceEEE
Confidence 3334456789999999999999986 5567776 99999999987664332211 223468889999841 1578999
Q ss_pred cccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccce
Q 016769 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEI 161 (383)
Q Consensus 82 ~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (383)
++.|++|++||++++.. +...+..+.... ....+ ..
T Consensus 86 ~~~dg~i~iwd~~~~~~---~~~~~~~~~~~v----------------------~~~~~-------------------~~ 121 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEM---PVYSVKGHKEII----------------------NAIDG-------------------IG 121 (357)
T ss_dssp EETTSCEEEECTTSCSS---CSEEECCCSSCE----------------------EEEEE-------------------ES
T ss_pred ecCCCeEEEEeCCCCCc---cEEEEEecccce----------------------EEEee-------------------cc
Confidence 99999999999987641 111111100000 00000 00
Q ss_pred ecccCCCCCceeeeccCCcceEEEEecCCCC-eeeEeccCcCCCCCCcCCCCCceeeEEE-eecCCCCCCceEEEEEeCC
Q 016769 162 IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQ-AYLPSKSQGFVNVLAGYED 239 (383)
Q Consensus 162 ~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~sg~~d 239 (383)
...+.+++. + +++++.++.|++||++++. .+..+..... .......++... .+.++ ...+++++.|
T Consensus 122 ~~~~s~~~~-~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~----~~~l~~~~~d 189 (357)
T 3i2n_A 122 GLGIGEGAP-E-IVTGSRDGTVKVWDPRQKDDPVANMEPVQG------ENKRDCWTVAFGNAYNQE----ERVVCAGYDN 189 (357)
T ss_dssp GGGCC-CCC-E-EEEEETTSCEEEECTTSCSSCSEEECCCTT------SCCCCEEEEEEECCCC-C----CCEEEEEETT
T ss_pred ccccCCCcc-E-EEEEeCCCeEEEEeCCCCCCcceeccccCC------CCCCceEEEEEEeccCCC----CCEEEEEccC
Confidence 001233443 3 3456678999999999876 4555432110 001122222211 12232 2368899999
Q ss_pred CcEEEEeCCCCCCceeeeeccccCeEEEEEeC---CCCceEEEEcCCcEEEEEccCCCCeeEEe-eeeecCCCCeEEEEE
Q 016769 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE---SCNGGISGGADQKIVLYNLDHSTGSCVIK-KEINLERPGISGTSI 315 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~~s~~~d~~i~~wdl~~~~~~~~~~-~~~~~~~~~i~~~~~ 315 (383)
+.|++||+++... .....|..++.++.|++ ++..+++++.|+.|++||+........+. .....+...+.+++|
T Consensus 190 ~~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~ 267 (357)
T 3i2n_A 190 GDIKLFDLRNMAL--RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRH 267 (357)
T ss_dssp SEEEEEETTTTEE--EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEE
T ss_pred CeEEEEECccCce--eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEE
Confidence 9999999987442 34466888999999999 88899999999999999987543222211 122356778999999
Q ss_pred CCCCc-EEEEEeCCCcEEEEEcCCC-------------------ceEEEecccccceeEEEEeCCCCEEE-EEeCCCcEE
Q 016769 316 RPDSK-IAATAGWDRRVRIYNYRKG-------------------SALAILKYHHATCNAVSFSSDCKLMA-SASEDSTVA 374 (383)
Q Consensus 316 ~p~~~-~l~s~~~dg~i~iwd~~~~-------------------~~~~~~~~h~~~v~~v~~spd~~~la-s~s~d~~i~ 374 (383)
+|+++ +|++++.||.|++||+..+ +.+..+.+|...|.+++|+|++++|+ +++.|+.|+
T Consensus 268 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 268 LPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVR 347 (357)
T ss_dssp ETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred CCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEE
Confidence 99998 8999999999999999754 35667889999999999999999888 899999999
Q ss_pred EEeCCCCC
Q 016769 375 LWELYPPH 382 (383)
Q Consensus 375 ~w~~~~~~ 382 (383)
+||+..++
T Consensus 348 iw~~~~~~ 355 (357)
T 3i2n_A 348 VLIVTKLN 355 (357)
T ss_dssp EEEECC--
T ss_pred EEECCCcc
Confidence 99997543
No 23
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.1e-34 Score=287.05 Aligned_cols=293 Identities=16% Similarity=0.299 Sum_probs=208.3
Q ss_pred eeeeeecCCceeeEEEeCCC-CeEEEecCCCeEEEeeCcccccc-----cccccccccceeeeeeecCCCCcceeEeccc
Q 016769 11 VAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTV-----SSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~-~~L~sgs~D~~v~vW~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (383)
...|++|++.|++|+|+|++ ++|+|||.|++|++|++...... ..+..| ...+.++++++ +++.|+|++.
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h--~~~v~~v~~s~--~g~~l~sgs~ 450 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH--SHFVEDVVLSS--DGQFALSGSW 450 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECC--SSCEEEEEECT--TSSEEEEEET
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCC--CCcEEEEEECC--CCCEEEEEeC
Confidence 34789999999999999875 79999999999999998654321 222233 34678899988 4688999999
Q ss_pred CCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
|++|++||+.++.... .+..+. ..+ ....
T Consensus 451 Dg~v~vwd~~~~~~~~----~~~~h~----------------------~~v-------------------------~~~~ 479 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTR----RFVGHT----------------------KDV-------------------------LSVA 479 (694)
T ss_dssp TSEEEEEETTTTEEEE----EEECCS----------------------SCE-------------------------EEEE
T ss_pred CCcEEEEECCCCccee----EEeCCC----------------------CCE-------------------------EEEE
Confidence 9999999998763210 000000 000 0012
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
+++++. .+++++.|++|++||+....... +... ...+...+.|+ .|.|+.. ...+++|+.|++|++
T Consensus 480 ~s~~~~--~l~s~s~D~~i~iwd~~~~~~~~-~~~~------~~~h~~~v~~~---~~~~~~~--~~~l~s~s~d~~v~v 545 (694)
T 3dm0_A 480 FSLDNR--QIVSASRDRTIKLWNTLGECKYT-ISEG------GEGHRDWVSCV---RFSPNTL--QPTIVSASWDKTVKV 545 (694)
T ss_dssp ECTTSS--CEEEEETTSCEEEECTTSCEEEE-ECSS------TTSCSSCEEEE---EECSCSS--SCEEEEEETTSCEEE
T ss_pred EeCCCC--EEEEEeCCCEEEEEECCCCccee-eccC------CCCCCCcEEEE---EEeCCCC--cceEEEEeCCCeEEE
Confidence 234443 34556778999999986544322 2111 00111222232 3544321 235889999999999
Q ss_pred EeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEE
Q 016769 245 WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 324 (383)
Q Consensus 245 wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s 324 (383)
||+++. .....+..|...|.++.|++++..+++++.|+.|++||+.... ... .+. ....+.+++|+|++.++++
T Consensus 546 wd~~~~-~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~--~~~--~~~-~~~~v~~~~~sp~~~~l~~ 619 (694)
T 3dm0_A 546 WNLSNC-KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK--KLY--SLE-ANSVIHALCFSPNRYWLCA 619 (694)
T ss_dssp EETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE--EEE--CCB-CSSCEEEEEECSSSSEEEE
T ss_pred EECCCC-cEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--eEE--Eec-CCCcEEEEEEcCCCcEEEE
Confidence 999874 4567788999999999999999999999999999999997542 222 122 2356999999999988776
Q ss_pred EeCCCcEEEEEcCCCceEEEecccc-------------------cceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 325 AGWDRRVRIYNYRKGSALAILKYHH-------------------ATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 325 ~~~dg~i~iwd~~~~~~~~~~~~h~-------------------~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++ |+.|++||+.+++.+..+..+. ..+.+++|||||++|++|+.||+|++|++.
T Consensus 620 ~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 620 AT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred Ec-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 55 6679999999988777664322 237889999999999999999999999985
No 24
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.1e-34 Score=265.66 Aligned_cols=300 Identities=15% Similarity=0.163 Sum_probs=211.0
Q ss_pred CCCeeeeeecCCceeeEEEeCCC-CeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCC
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~-~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ 86 (383)
.+....+.+|.+.|++++|+|++ ++|++|+.|+.|+|||+.+++....+........+.++++++. ++..|++++.|+
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~d~ 141 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF-NTNQLFVSSIRG 141 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT-EEEEEEEEETTT
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC-CCCEEEEEeCCC
Confidence 44567889999999999999999 8999999999999999987765544332223356888999873 357899999999
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
+|++||+++.. ...+.....+ ... .....+.
T Consensus 142 ~i~iwd~~~~~-----~~~~~~~~~~-------------------~~~-------------------------v~~~~~~ 172 (383)
T 3ei3_B 142 ATTLRDFSGSV-----IQVFAKTDSW-------------------DYW-------------------------YCCVDVS 172 (383)
T ss_dssp EEEEEETTSCE-----EEEEECCCCS-------------------SCC-------------------------EEEEEEE
T ss_pred EEEEEECCCCc-----eEEEeccCCC-------------------CCC-------------------------eEEEEEC
Confidence 99999997431 0010000000 000 0001122
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
+++. + +++++.++.|++||+ +++.+..+..+ ...+.++ .+.|.. ...+++|+.|++|++||
T Consensus 173 ~~~~-~-l~~~~~d~~i~i~d~-~~~~~~~~~~h----------~~~v~~~---~~~~~~---~~~l~s~~~d~~i~iwd 233 (383)
T 3ei3_B 173 VSRQ-M-LATGDSTGRLLLLGL-DGHEIFKEKLH----------KAKVTHA---EFNPRC---DWLMATSSVDATVKLWD 233 (383)
T ss_dssp TTTT-E-EEEEETTSEEEEEET-TSCEEEEEECS----------SSCEEEE---EECSSC---TTEEEEEETTSEEEEEE
T ss_pred CCCC-E-EEEECCCCCEEEEEC-CCCEEEEeccC----------CCcEEEE---EECCCC---CCEEEEEeCCCEEEEEe
Confidence 3443 3 445667899999999 45555555421 1222222 244432 22588999999999999
Q ss_pred CCCCC---CceeeeeccccCeEEEEEeC-CCCceEEEEcCCcEEEEEccCCCCeeEEeeeee---cC----------CCC
Q 016769 247 IRNPG---IPLTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN---LE----------RPG 309 (383)
Q Consensus 247 l~~~~---~~~~~~~~h~~~v~~~~~~~-~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~---~~----------~~~ 309 (383)
+++.. ..+..+ .|..+|.++.|++ ++..+++++.|+.|++||++.......+..... .+ ...
T Consensus 234 ~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 312 (383)
T 3ei3_B 234 LRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYD 312 (383)
T ss_dssp GGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSS
T ss_pred CCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCC
Confidence 98632 233334 6899999999999 999999999999999999986554333321110 01 123
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecc--cccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY--HHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+..++|+|++++ +++.|++|++||+.+++.+..+.+ |...+.+++|+||+++|++|+ |+.|++||+..
T Consensus 313 ~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 313 LIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred ceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 445667777776 778999999999999999998987 456788889999999999998 99999999964
No 25
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.7e-33 Score=252.70 Aligned_cols=296 Identities=17% Similarity=0.211 Sum_probs=210.8
Q ss_pred CCCCCCeeeee--ecCCc--eeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeE
Q 016769 5 PPPPDPVAVLR--GHRAS--VTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI 80 (383)
Q Consensus 5 ~~~~~~~~~l~--gH~~~--V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (383)
.-|..|..+|. ++.+. .++|+||+++ +||+| .|++|+|||+.+++++..+..+.+...+.++++++ +++.|+
T Consensus 8 ~~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~--~~~~l~ 83 (318)
T 4ggc_A 8 YIPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK--EGNYLA 83 (318)
T ss_dssp CCCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT--TSSEEE
T ss_pred ccCCCCCEEeeCCCCcccccceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECC--CCCEEE
Confidence 34666777775 44443 4789999986 67665 69999999999888776655555455688999998 468999
Q ss_pred ecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccc
Q 016769 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFE 160 (383)
Q Consensus 81 s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
+|+.|++|++||+++++... ....+...
T Consensus 84 sgs~Dg~v~iw~~~~~~~~~----~~~~h~~~------------------------------------------------ 111 (318)
T 4ggc_A 84 VGTSSAEVQLWDVQQQKRLR----NMTSHSAR------------------------------------------------ 111 (318)
T ss_dssp EEETTSEEEEEETTTTEEEE----EEECCSSC------------------------------------------------
T ss_pred EEECCCcEEEeecCCceeEE----EecCccce------------------------------------------------
Confidence 99999999999998764211 11000000
Q ss_pred eecccCCCCCceeeeccCCcceEEEEecCCCCe-eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCC
Q 016769 161 IIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 239 (383)
Q Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~d 239 (383)
...+...+ . ++++++.++.+++|+...... +..+..+ .....+. .+.+. ...+++++.|
T Consensus 112 -~~~~~~~~-~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~---~~~~~----~~~l~s~~~d 171 (318)
T 4ggc_A 112 -VGSLSWNS-Y-ILSSGSRSGHIHHHDVRVAEHHVATLSGH----------SQEVCGL---RWAPD----GRHLASGGND 171 (318)
T ss_dssp -EEEEEEET-T-EEEEEETTSEEEEEETTSSSCEEEEEECC----------SSCEEEE---EECTT----SSEEEEEETT
T ss_pred -EEEeecCC-C-EEEEEecCCceEeeecCCCceeEEEEcCc----------cCceEEE---EEcCC----CCEEEEEecC
Confidence 00001111 2 345667789999999987654 3333221 1111111 23322 2368899999
Q ss_pred CcEEEEeCCCCCC---ceeeeeccccCeEEEEEeCCCCce---EEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEE
Q 016769 240 GSILVWDIRNPGI---PLTAMKVHLEPVLCLSIDESCNGG---ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGT 313 (383)
Q Consensus 240 g~i~~wdl~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~---~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~ 313 (383)
++|++||+++... .......|..+|..+.+.+....+ ++++.++.|++||........ ...+...+..+
T Consensus 172 ~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~-----~~~~~~~v~~~ 246 (318)
T 4ggc_A 172 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS-----AVDAHSQVCSI 246 (318)
T ss_dssp SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEE-----EEECSSCEEEE
T ss_pred cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccc-----cccceeeeeee
Confidence 9999999986432 233445677889999997766544 356678999999987543211 12344578999
Q ss_pred EECCCCcEEEEEe--CCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 314 SIRPDSKIAATAG--WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 314 ~~~p~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
.|+|+++.+++++ .|++|++||+++++.+..+.+|.+.|.+++|+|||++|||||.|++|+|||+++.
T Consensus 247 ~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 247 LWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred eecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9999999887765 7999999999999999999999999999999999999999999999999999754
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.3e-34 Score=277.90 Aligned_cols=326 Identities=21% Similarity=0.319 Sum_probs=219.2
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
++...|+||++.|++|+|+|||++||||+.|++|+|||. +++++..+..|. ..+.+++|+| ++++|++++.|++|
T Consensus 7 ~e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~--~~V~~l~fsp--dg~~las~~~d~~i 81 (577)
T 2ymu_A 7 KERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS--SSVWGVAFSP--DGQTIASASDDKTV 81 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCS--SCEEEEEECT--TSSEEEEEETTSCE
T ss_pred EEeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCC--CCEEEEEECC--CCCEEEEEeCCCEE
Confidence 455789999999999999999999999999999999995 566666666554 4688999998 46899999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCC-CccceeccCcccccCccccccccCCccceecccCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEP-KDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
++||+. ++. ...+..+........+.......+....+. ...+..... . ...............+.+
T Consensus 82 ~vWd~~-~~~----~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~-~------~~~~~~~~~~v~~~~~~~ 149 (577)
T 2ymu_A 82 KLWNRN-GQL----LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ-L------LQTLTGHSSSVWGVAFSP 149 (577)
T ss_dssp EEEETT-SCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCC-E------EEEECCCSSCEEEEEECT
T ss_pred EEEECC-CCE----EEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccc-e------eeeccCCCCceeeeeeec
Confidence 999964 321 122222111111111111100000000000 000000000 0 000000000011112233
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
++. .+ ..+..++.+++|+....... .... ......++ .+.++. ..+++++.|+.|++||.
T Consensus 150 ~~~-~~-~~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~v~~~---~~~~~~----~~l~~~~~d~~v~~w~~ 209 (577)
T 2ymu_A 150 DGQ-TI-ASASDDKTVKLWNRNGQLLQ-TLTG----------HSSSVWGV---AFSPDG----QTIASASDDKTVKLWNR 209 (577)
T ss_dssp TSS-CE-EEEETTSEEEEECTTSCEEE-EEEC----------CSSCEEEE---EECTTS----SCEEEEETTSEEEEECT
T ss_pred CCc-cc-eecccccceeccccceeeee-eccC----------CCcceeee---eecCCC----CEEEEEcCCCEEEEEeC
Confidence 433 23 33455678999986544322 2211 11112221 244432 25889999999999996
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW 327 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~ 327 (383)
. ...+..+..|..+|.+++|++++..+++++.|+.|++||.+. .. ...+..+...+.+++|+|+++++++++.
T Consensus 210 ~--~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~---~~--~~~~~~~~~~v~~v~~~~d~~~l~~~~~ 282 (577)
T 2ymu_A 210 N--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---QL--LQTLTGHSSSVNGVAFRPDGQTIASASD 282 (577)
T ss_dssp T--SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS---CE--EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred C--CcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC---CE--EEEEecCCCCEEEEEEcCCCCEEEEEeC
Confidence 4 345677889999999999999999999999999999998643 22 2234456678999999999999999999
Q ss_pred CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
|++|++||. .++.+..+.+|...|.+++|+||+++|++++.|+.|++||+.
T Consensus 283 d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~ 333 (577)
T 2ymu_A 283 DKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN 333 (577)
T ss_dssp TSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999999997 467778889999999999999999999999999999999975
No 27
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4e-35 Score=277.52 Aligned_cols=303 Identities=15% Similarity=0.182 Sum_probs=203.1
Q ss_pred CeeeeeecCCceeeEEEeC-CCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 10 PVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~-~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
......+|...|+||+||| ++++||+|+.||+|+|||+.++.....+....+...|.+++|+|. ++++|+|++.|++|
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~-~~~~l~s~s~D~~v 189 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL-NTNQFYASSMEGTT 189 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS-CTTEEEEECSSSCE
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC-CCCEEEEEeCCCEE
Confidence 4456789999999999999 567999999999999999876654332222223356889999874 46789999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||++++.. ..+... .. ... ......+.++
T Consensus 190 ~iwd~~~~~~-----~~~~~~------------~~---------~~~-----------------------~~~~~~~~~~ 220 (435)
T 4e54_B 190 RLQDFKGNIL-----RVFASS------------DT---------INI-----------------------WFCSLDVSAS 220 (435)
T ss_dssp EEEETTSCEE-----EEEECC------------SS---------CSC-----------------------CCCCEEEETT
T ss_pred EEeeccCCce-----eEEecc------------CC---------CCc-----------------------cEEEEEECCC
Confidence 9999975421 000000 00 000 0000112233
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
+. ++++|+.++.|++||++... +..+.. +...+.++ .|.|.. ...+++|+.|++|++||++
T Consensus 221 ~~--~l~~g~~dg~i~~wd~~~~~-~~~~~~----------h~~~v~~v---~~~p~~---~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 221 SR--MVVTGDNVGNVILLNMDGKE-LWNLRM----------HKKKVTHV---ALNPCC---DWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp TT--EEEEECSSSBEEEEESSSCB-CCCSBC----------CSSCEEEE---EECTTC---SSEEEEEETTSBCCEEETT
T ss_pred CC--EEEEEeCCCcEeeeccCcce-eEEEec----------ccceEEee---eecCCC---ceEEEEecCcceeeEEecc
Confidence 33 34566778999999996533 333321 11222222 344432 2257789999999999998
Q ss_pred CCCCc--eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecC--CCCeEEEEECCCCcEEEE
Q 016769 249 NPGIP--LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE--RPGISGTSIRPDSKIAAT 324 (383)
Q Consensus 249 ~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~s 324 (383)
+.... +.....|..+|.+++|++++..+++++.|+.|++||+........+....... ...+....++|++.++++
T Consensus 282 ~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (435)
T 4e54_B 282 QVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVV 361 (435)
T ss_dssp TCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEE
T ss_pred cccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEE
Confidence 74422 23345789999999999999999999999999999997655433222111111 012234456666666666
Q ss_pred Ee------------CCCcEEEEEcCCCceEEEe-cccccceeEE-EEeCCCCEEEEEeCCCcEEEEeCCCCC
Q 016769 325 AG------------WDRRVRIYNYRKGSALAIL-KYHHATCNAV-SFSSDCKLMASASEDSTVALWELYPPH 382 (383)
Q Consensus 325 ~~------------~dg~i~iwd~~~~~~~~~~-~~h~~~v~~v-~~spd~~~las~s~d~~i~~w~~~~~~ 382 (383)
++ .+++|++||..+++.+..+ .+|...|.++ +|||||++||+|+ |+.|+|||+.+.+
T Consensus 362 ~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 362 GRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp ECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC---
T ss_pred EEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCe
Confidence 54 3468999999999988776 4688888887 6999999999987 7899999997643
No 28
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-33 Score=253.12 Aligned_cols=294 Identities=16% Similarity=0.197 Sum_probs=213.3
Q ss_pred CCCCCCC-CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeE
Q 016769 2 SKRPPPP-DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI 80 (383)
Q Consensus 2 ~~~~~~~-~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (383)
|+.|.+. ++..+|.+|.+.|++++| |++++|++|+.||.|++||+.+++....+..| ...+.++++++ ++..++
T Consensus 1 ~~d~~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~--~~~v~~~~~~~--~~~~l~ 75 (313)
T 3odt_A 1 GIDPFTGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTG--QGFLNSVCYDS--EKELLL 75 (313)
T ss_dssp ----CCCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEEC--SSCEEEEEEET--TTTEEE
T ss_pred CCCccccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecC--CccEEEEEECC--CCCEEE
Confidence 3455444 677899999999999999 99999999999999999999877665554444 34688889988 468899
Q ss_pred ecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccc
Q 016769 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFE 160 (383)
Q Consensus 81 s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
+++.|+++++|++.+..... +...+..+. ..
T Consensus 76 ~~~~dg~i~~~~~~~~~~~~-~~~~~~~~~----------------------~~-------------------------- 106 (313)
T 3odt_A 76 FGGKDTMINGVPLFATSGED-PLYTLIGHQ----------------------GN-------------------------- 106 (313)
T ss_dssp EEETTSCEEEEETTCCTTSC-C-CEECCCS----------------------SC--------------------------
T ss_pred EecCCCeEEEEEeeecCCCC-cccchhhcc----------------------cC--------------------------
Confidence 99999999999997643111 000000000 00
Q ss_pred eecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC
Q 016769 161 IIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 240 (383)
Q Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg 240 (383)
+..+..++ .+ +++++.++.|++|| ..+....+..+ .....++. +.+. ....+++++.|+
T Consensus 107 -i~~~~~~~-~~-l~~~~~d~~i~~~d--~~~~~~~~~~~----------~~~v~~~~---~~~~---~~~~l~~~~~d~ 165 (313)
T 3odt_A 107 -VCSLSFQD-GV-VISGSWDKTAKVWK--EGSLVYNLQAH----------NASVWDAK---VVSF---SENKFLTASADK 165 (313)
T ss_dssp -EEEEEEET-TE-EEEEETTSEEEEEE--TTEEEEEEECC----------SSCEEEEE---EEET---TTTEEEEEETTS
T ss_pred -EEEEEecC-CE-EEEEeCCCCEEEEc--CCcEEEecccC----------CCceeEEE---EccC---CCCEEEEEECCC
Confidence 00001112 23 34556789999999 44444444321 11222222 2221 112588999999
Q ss_pred cEEEEeCCCCCCceeeeec-cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC
Q 016769 241 SILVWDIRNPGIPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319 (383)
Q Consensus 241 ~i~~wdl~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 319 (383)
.|++||... ....+.. |..++.++.+++++. +++++.|+.|++||++.... . ..+..+...+.+++|+|++
T Consensus 166 ~i~i~d~~~---~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~--~--~~~~~~~~~i~~~~~~~~~ 237 (313)
T 3odt_A 166 TIKLWQNDK---VIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDV--L--RTYEGHESFVYCIKLLPNG 237 (313)
T ss_dssp CEEEEETTE---EEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCE--E--EEEECCSSCEEEEEECTTS
T ss_pred CEEEEecCc---eEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhh--h--hhhhcCCceEEEEEEecCC
Confidence 999999443 3455555 888999999999887 89999999999999975432 1 2344566789999999999
Q ss_pred cEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 320 KIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 320 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.+++++.||+|++||+.+++.+..+..|...|.+++|+|+++ +++++.|+.|++||+..
T Consensus 238 -~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 238 -DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp -CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred -CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 588999999999999999999999999999999999999998 66799999999999864
No 29
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.2e-34 Score=265.78 Aligned_cols=308 Identities=12% Similarity=0.161 Sum_probs=218.2
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc------cccccccccccceeeeeeecCC--CCc---ce
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR------TVSSSWVHSAAHGIVSVATGPS--IGL---NK 78 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~---~~ 78 (383)
...++++|++.|++|+|+| ++|++|+.||.|++|++.+.+ .+..+..|. ..+.++.+.++ .++ ..
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK--SGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCT--TCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCC--CcEEEEEEecccccCCccccE
Confidence 4567889999999999999 799999999999999998776 344443333 45788888872 015 78
Q ss_pred eEecccCCeEEEeecCCCCCCCCC-eeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCC
Q 016769 79 VISQGRDGTVKCWDIENGGLSSNP-SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNR 157 (383)
Q Consensus 79 l~s~~~D~ti~~Wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (383)
|++++.|++|++||++++...... ...+..+. .... ...
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~----------~~~~-------~~~----------------------- 123 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLD----------SDMK-------KHS----------------------- 123 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSC----------TTGG-------GSC-----------------------
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccc----------cccC-------CCc-----------------------
Confidence 999999999999999876421100 00000000 0000 000
Q ss_pred ccceecccC----CCCCceeeeccCCcceEEEEecCC------CCeee-----EeccCcCCCCCCcCCCCCceeeEEEee
Q 016769 158 SFEIIDDVP----AEGPKYMAVAGEQLSEVEIWDLNT------AERCT-----RLHQNSCGGSPNFSSKGRGMCMAVQAY 222 (383)
Q Consensus 158 ~~~~~~~~~----~~~~~~~~~~g~~~~~i~~Wdl~~------~~~~~-----~~~~~~~~~s~~~~~~~~~~~~~~~~~ 222 (383)
.....+. +++ ++++++++.++.|++||+++ .+.+. .+..... ....+.....++. +
T Consensus 124 --v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~---~ 194 (397)
T 1sq9_A 124 --FWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVE---SPMTPSQFATSVD---I 194 (397)
T ss_dssp --EEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEEC---CSSSSCCCCCEEE---E
T ss_pred --EEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeec---cccCCCCCceEEE---E
Confidence 0001122 333 34144556789999999988 55443 3321000 0001112222322 4
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeec---c---ccCeEEEEEeCCCCceEEEEcC---CcEEEEEccCC
Q 016769 223 LPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV---H---LEPVLCLSIDESCNGGISGGAD---QKIVLYNLDHS 293 (383)
Q Consensus 223 ~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~---h---~~~v~~~~~~~~~~~~~s~~~d---~~i~~wdl~~~ 293 (383)
.+. + .+++++.|+.|++||+++ ..++..+.. | ..++.++.|++++..+++++.| +.|++||+...
T Consensus 195 ~~~---~--~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 195 SER---G--LIATGFNNGTVQISELST-LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp CTT---S--EEEEECTTSEEEEEETTT-TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC
T ss_pred CCC---c--eEEEEeCCCcEEEEECCC-CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 432 2 588999999999999987 445677777 8 8999999999999999999999 99999999754
Q ss_pred CCeeEEeeeeec-------------CCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEec------cc------
Q 016769 294 TGSCVIKKEINL-------------ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK------YH------ 348 (383)
Q Consensus 294 ~~~~~~~~~~~~-------------~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~h------ 348 (383)
.... .+.. +...+.+++|+|++++|++++.|++|++||+.+++.+..+. +|
T Consensus 269 ~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1sq9_A 269 ERIG----SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILA 344 (397)
T ss_dssp CEEE----EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCC
T ss_pred cccc----eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhc
Confidence 3222 2333 56789999999999999999999999999999999999998 88
Q ss_pred ---------ccceeEEEEeCCC----------CEEEEEeCCCcEEEEeCCC
Q 016769 349 ---------HATCNAVSFSSDC----------KLMASASEDSTVALWELYP 380 (383)
Q Consensus 349 ---------~~~v~~v~~spd~----------~~las~s~d~~i~~w~~~~ 380 (383)
...|.+++|+|++ ++|++|+.|+.|++||+..
T Consensus 345 g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 345 VDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp BCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred cccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 9999999999998 7999999999999999853
No 30
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-34 Score=274.45 Aligned_cols=312 Identities=16% Similarity=0.268 Sum_probs=211.3
Q ss_pred CCCeeee-eecCCceeeEEEeC-CCCeEEEecCCCeEEEeeCcc---cccccccccccccceeeeeeecCCCCcceeEec
Q 016769 8 PDPVAVL-RGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQ---HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (383)
Q Consensus 8 ~~~~~~l-~gH~~~V~~v~f~~-~~~~L~sgs~D~~v~vW~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 82 (383)
-+++..| ++|.+.|++|+|+| ++++|+||+.||+|+|||+.+ +..............+.++++.+ ++..|+++
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~ 129 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIP--NFDAFAVS 129 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECT--TSSEEEEE
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeC--CCCEEEEE
Confidence 3456777 89999999999999 999999999999999999876 33221111112335688999998 46889999
Q ss_pred ccCCeEEEeecC---CCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCcc
Q 016769 83 GRDGTVKCWDIE---NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSF 159 (383)
Q Consensus 83 ~~D~ti~~Wd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (383)
+.|++|++||++ ++... .... .+ +...+.-.+.. ... ...
T Consensus 130 s~dg~i~vwd~~~~~~~~~~----~~~~---~~-~i~~~~~~~~~------~~~-----------------------~~~ 172 (437)
T 3gre_A 130 SKDGQIIVLKVNHYQQESEV----KFLN---CE-CIRKINLKNFG------KNE-----------------------YAV 172 (437)
T ss_dssp ETTSEEEEEEEEEEEETTEE----EEEE---EE-EEEEEEGGGGS------SCC-----------------------CEE
T ss_pred eCCCEEEEEEeccccCCcee----eccc---cc-eeEEEEccCcc------ccc-----------------------Cce
Confidence 999999999995 33210 0000 00 00000000000 000 000
Q ss_pred ceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCC
Q 016769 160 EIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 239 (383)
Q Consensus 160 ~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~d 239 (383)
.......+++ . ++++++.++.|++||+++++.+..+.... +...+.++ .+.|. ...+++|+.|
T Consensus 173 ~~~~~~~~~~-~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------h~~~v~~~---~~s~~----~~~l~s~~~d 235 (437)
T 3gre_A 173 RMRAFVNEEK-S-LLVALTNLSRVIIFDIRTLERLQIIENSP--------RHGAVSSI---CIDEE----CCVLILGTTR 235 (437)
T ss_dssp EEEEEECSSC-E-EEEEEETTSEEEEEETTTCCEEEEEECCG--------GGCCEEEE---EECTT----SCEEEEEETT
T ss_pred EEEEEEcCCC-C-EEEEEeCCCeEEEEeCCCCeeeEEEccCC--------CCCceEEE---EECCC----CCEEEEEcCC
Confidence 0000011222 3 44556778999999999998877775310 11222232 24443 2368899999
Q ss_pred CcEEEEeCCCCCCceeeee-ccccCeEEEEEeC----CCCceEEEEcCCcEEEEEccCCCCeeEEeee------------
Q 016769 240 GSILVWDIRNPGIPLTAMK-VHLEPVLCLSIDE----SCNGGISGGADQKIVLYNLDHSTGSCVIKKE------------ 302 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~-~h~~~v~~~~~~~----~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~------------ 302 (383)
|+|++||+++ ..++..+. .|..+|.++.+.+ ++..+++++.|+.|++||++.......+...
T Consensus 236 g~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (437)
T 3gre_A 236 GIIDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPI 314 (437)
T ss_dssp SCEEEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCB
T ss_pred CeEEEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccc
Confidence 9999999997 44556554 6778999996654 4557899999999999999754322222100
Q ss_pred --------ee--cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecc-------------------------
Q 016769 303 --------IN--LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY------------------------- 347 (383)
Q Consensus 303 --------~~--~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------------------------- 347 (383)
.. .+...|.+++|+ ++++|++++.|++|++||+.+++....+.+
T Consensus 315 ~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (437)
T 3gre_A 315 EKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMK 393 (437)
T ss_dssp CSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC
T ss_pred ccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecc
Confidence 00 134458889999 779999999999999999998877666654
Q ss_pred ------------cccceeEEEEeCC--CCEEEEEeCCCcEEEEe
Q 016769 348 ------------HHATCNAVSFSSD--CKLMASASEDSTVALWE 377 (383)
Q Consensus 348 ------------h~~~v~~v~~spd--~~~las~s~d~~i~~w~ 377 (383)
|...|.+++|+++ +++|++|+.||+|+||+
T Consensus 394 ~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 394 RTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999998 77999999999999996
No 31
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.5e-33 Score=260.49 Aligned_cols=304 Identities=17% Similarity=0.238 Sum_probs=213.4
Q ss_pred CCeeeeeecCCceeeEEEeC-CCCeEEEecCCCeEEEeeCccccccccccc-----------ccccceeeeeeecCCCCc
Q 016769 9 DPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWV-----------HSAAHGIVSVATGPSIGL 76 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~-~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 76 (383)
+....+.+|.+.|++|+|+| ++++|++|+.||.|++||+.++........ ......+.++.+.+. ++
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~ 112 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPH-DT 112 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTT-CT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccC-CC
Confidence 45678899999999999999 999999999999999999987665443321 012346888899874 35
Q ss_pred ceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccC
Q 016769 77 NKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESN 156 (383)
Q Consensus 77 ~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (383)
..|++++.|++|++||+.+++... .+ .. ... ....
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~----~~----------~~-~~~------------~~~~------------------ 147 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTLQTAD----VF----------NF-EET------------VYSH------------------ 147 (408)
T ss_dssp TCEEEEETTSEEEEEETTTTEEEE----EE----------EC-SSC------------EEEE------------------
T ss_pred cEEEEEeCCCeEEEeeCCCCccce----ec----------cC-CCc------------eeee------------------
Confidence 789999999999999998763210 00 00 000 0000
Q ss_pred CccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEE
Q 016769 157 RSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG 236 (383)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 236 (383)
. ......++ . ++++++.++.|++||+++++.+..+..+ ...+.++ .+.|.. ...+++|
T Consensus 148 ---~-~~~~~~~~-~-~~~~~~~~~~v~~~d~~~~~~~~~~~~~----------~~~v~~~---~~~~~~---~~ll~~~ 205 (408)
T 4a11_B 148 ---H-MSPVSTKH-C-LVAVGTRGPKVQLCDLKSGSCSHILQGH----------RQEILAV---SWSPRY---DYILATA 205 (408)
T ss_dssp ---E-ECSSCSSC-C-EEEEEESSSSEEEEESSSSCCCEEECCC----------CSCEEEE---EECSSC---TTEEEEE
T ss_pred ---E-eecCCCCC-c-EEEEEcCCCeEEEEeCCCcceeeeecCC----------CCcEEEE---EECCCC---CcEEEEE
Confidence 0 00001111 2 3455667899999999998877666431 1222222 244432 2247789
Q ss_pred eCCCcEEEEeCCCCCCceeee---------------eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee
Q 016769 237 YEDGSILVWDIRNPGIPLTAM---------------KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK 301 (383)
Q Consensus 237 ~~dg~i~~wdl~~~~~~~~~~---------------~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~ 301 (383)
+.||.|++||+++...++..+ ..|..+|.++.|++++..+++++.|+.|++||+...........
T Consensus 206 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 285 (408)
T 4a11_B 206 SADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYG 285 (408)
T ss_dssp ETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCC
T ss_pred cCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccc
Confidence 999999999998755334333 56888999999999999999999999999999976543221111
Q ss_pred eee-cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 302 EIN-LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 302 ~~~-~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
... .....+........+..++.++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++|+.||.|++||+..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 286 KVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp CCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC
T ss_pred cccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCC
Confidence 110 0111122222233445667778899999999999999999999999999999999999999999999999999864
No 32
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.3e-34 Score=262.79 Aligned_cols=299 Identities=13% Similarity=0.167 Sum_probs=210.8
Q ss_pred eeeecCCceeeEEEeCC----CCeEEEecCCCeEEEeeCccccccccccccc---ccceeeeeeecCCCC--cceeEecc
Q 016769 13 VLRGHRASVTDVCFHQT----KPILFAGTTGGELRIWDTVQHRTVSSSWVHS---AAHGIVSVATGPSIG--LNKVISQG 83 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~----~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~l~s~~ 83 (383)
.+.+|.++|++|+|+|+ ...+++++.++.|++||..+++.+..+..+. ....+.+++++++.. +..|++++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 45599999999999984 4567777888899999998776655544332 224578888887422 46899999
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.|++|++||+++++.. ..+..+. ..+ ...
T Consensus 93 ~dg~i~v~d~~~~~~~----~~~~~~~----------------------~~i-------------------------~~~ 121 (366)
T 3k26_A 93 SRGIIRIINPITMQCI----KHYVGHG----------------------NAI-------------------------NEL 121 (366)
T ss_dssp TTCEEEEECTTTCCEE----EEEESCC----------------------SCE-------------------------EEE
T ss_pred CCCEEEEEEchhceEe----eeecCCC----------------------CcE-------------------------EEE
Confidence 9999999999876421 0110000 000 001
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
.+.+.+..+ +++++.++.|++||+++++.+..+... ..+...+.++ .+.|+. ..+++++.||.|+
T Consensus 122 ~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~v~~~---~~~~~~----~~l~~~~~dg~i~ 186 (366)
T 3k26_A 122 KFHPRDPNL-LLSVSKDHALRLWNIQTDTLVAIFGGV-------EGHRDEVLSA---DYDLLG----EKIMSCGMDHSLK 186 (366)
T ss_dssp EECSSCTTE-EEEEETTSCEEEEETTTTEEEEEECST-------TSCSSCEEEE---EECTTS----SEEEEEETTSCEE
T ss_pred EECCCCCCE-EEEEeCCCeEEEEEeecCeEEEEeccc-------ccccCceeEE---EECCCC----CEEEEecCCCCEE
Confidence 122312233 445667899999999998877666310 0111222222 244432 3688999999999
Q ss_pred EEeCCCCCCc---------------------------eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCC-
Q 016769 244 VWDIRNPGIP---------------------------LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG- 295 (383)
Q Consensus 244 ~wdl~~~~~~---------------------------~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~- 295 (383)
+||+++.... ......|..+|.++.|+ +..+++++.|+.|++||+.....
T Consensus 187 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~ 264 (366)
T 3k26_A 187 LWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDD 264 (366)
T ss_dssp EEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCC
T ss_pred EEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccc
Confidence 9999863210 11222388999999998 56889999999999999875432
Q ss_pred ---------eeEEeeeeecCCCCeEEEEECCC--CcEEEEEeCCCcEEEEEcCCCc----eEEEeccc--ccceeEEEEe
Q 016769 296 ---------SCVIKKEINLERPGISGTSIRPD--SKIAATAGWDRRVRIYNYRKGS----ALAILKYH--HATCNAVSFS 358 (383)
Q Consensus 296 ---------~~~~~~~~~~~~~~i~~~~~~p~--~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~h--~~~v~~v~~s 358 (383)
..........+...+.+++|+|+ +++|++++.||.|++||+.+++ ....+.+| ...|.+++|+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 344 (366)
T 3k26_A 265 IDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFS 344 (366)
T ss_dssp GGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEEC
T ss_pred ccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeC
Confidence 11122334556667899999999 9999999999999999998875 34477777 7899999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCC
Q 016769 359 SDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 359 pd~~~las~s~d~~i~~w~~~ 379 (383)
|++++|++|+.||.|++||+.
T Consensus 345 ~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 345 RDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TTSSEEEEEETTSEEEEEEC-
T ss_pred CCCCeEEEEeCCCEEEEEEec
Confidence 999999999999999999973
No 33
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.9e-32 Score=247.67 Aligned_cols=287 Identities=15% Similarity=0.227 Sum_probs=212.1
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccccccccc---ccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV---HSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
...+|.+.|++++|+|++++|++++ |+.|++||+.+++....... ......+.++++.+ +++.+++++.|++|+
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~ 122 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP--DGCTLIVGGEASTLS 122 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECT--TSSEEEEEESSSEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcC--CCCEEEEEcCCCcEE
Confidence 4458999999999999999999999 99999999977654332221 12335688899998 468899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+||+++++... .. .+.. .. ..+ ....+.+++
T Consensus 123 ~~d~~~~~~~~--~~------------~~~~-~~---------~~i-------------------------~~~~~~~~~ 153 (337)
T 1gxr_A 123 IWDLAAPTPRI--KA------------ELTS-SA---------PAC-------------------------YALAISPDS 153 (337)
T ss_dssp EEECCCC--EE--EE------------EEEC-SS---------SCE-------------------------EEEEECTTS
T ss_pred EEECCCCCcce--ee------------eccc-CC---------Cce-------------------------EEEEECCCC
Confidence 99998653100 00 0000 00 000 001122333
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
+++ ++++.++.|++||+++++.+..+..+ .....++ .+.|+. ..+++++.|+.|++||+++
T Consensus 154 -~~l-~~~~~dg~v~~~d~~~~~~~~~~~~~----------~~~i~~~---~~~~~~----~~l~~~~~dg~i~~~d~~~ 214 (337)
T 1gxr_A 154 -KVC-FSCCSDGNIAVWDLHNQTLVRQFQGH----------TDGASCI---DISNDG----TKLWTGGLDNTVRSWDLRE 214 (337)
T ss_dssp -SEE-EEEETTSCEEEEETTTTEEEEEECCC----------SSCEEEE---EECTTS----SEEEEEETTSEEEEEETTT
T ss_pred -CEE-EEEeCCCcEEEEeCCCCceeeeeecc----------cCceEEE---EECCCC----CEEEEEecCCcEEEEECCC
Confidence 233 44566889999999998877666431 1122222 244432 3688999999999999987
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR 329 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg 329 (383)
.. .+..+ .|..++.++.+++++..+++++.|+.|++||++.... .....+...+.+++|+|++++|++++.||
T Consensus 215 ~~-~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 215 GR-QLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-----YQLHLHESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp TE-EEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-----EEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred Cc-eEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-----EEEcCCccceeEEEECCCCCEEEEecCCC
Confidence 43 33333 4677899999999999999999999999999976431 12345667899999999999999999999
Q ss_pred cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 330 RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.|++||+.+++.+... .|...|.+++|+|++++|++++.||.|++|++
T Consensus 288 ~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 288 LLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred cEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 9999999999887544 58889999999999999999999999999997
No 34
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.8e-34 Score=260.20 Aligned_cols=257 Identities=18% Similarity=0.168 Sum_probs=168.8
Q ss_pred eeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc--cccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
.++.+|.+.|++++|+|+|++|+|||.|++|+|||+.+++ ++..+..|. ..+.+++|.+..+++.|+|++.|++|+
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~--~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHE--GPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCS--SCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCC--ccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 3578999999999999999999999999999999987654 233444443 457888887532357899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+||++++.... ... + .... ..+ ....+.+++
T Consensus 85 iWd~~~~~~~~--~~~------------~-~~h~---------~~V-------------------------~~v~~~p~~ 115 (316)
T 3bg1_A 85 IWREENGTWEK--SHE------------H-AGHD---------SSV-------------------------NSVCWAPHD 115 (316)
T ss_dssp EECCSSSCCCE--EEE------------E-CCCS---------SCC-------------------------CEEEECCTT
T ss_pred EEECCCCcceE--EEE------------c-cCCC---------Cce-------------------------EEEEECCCC
Confidence 99987652100 000 0 0000 000 000011110
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
... .+++|+.|++|++||++.
T Consensus 116 ~g~-----------------------------------------------------------~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 116 YGL-----------------------------------------------------------ILACGSSDGAISLLTYTG 136 (316)
T ss_dssp TCS-----------------------------------------------------------CEEEECSSSCEEEEEECS
T ss_pred CCc-----------------------------------------------------------EEEEEcCCCCEEEEecCC
Confidence 001 244455555555555543
Q ss_pred CCCc--eeeeeccccCeEEEEEeCC-----------------CCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 250 PGIP--LTAMKVHLEPVLCLSIDES-----------------CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 250 ~~~~--~~~~~~h~~~v~~~~~~~~-----------------~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
.... ...+..|...+.++.|++. +..+++|+.|+.|++||++... .......+..|...|
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~l~~h~~~V 215 (316)
T 3bg1_A 137 EGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-QWKEEQKLEAHSDWV 215 (316)
T ss_dssp SSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTS-CEEEEECCBCCSSCE
T ss_pred CCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCC-ccceeeecccCCCce
Confidence 2110 1223345555555555544 3578999999999999996432 111223455677889
Q ss_pred EEEEECCCC----cEEEEEeCCCcEEEEEcCCCc----eEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 311 SGTSIRPDS----KIAATAGWDRRVRIYNYRKGS----ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 311 ~~~~~~p~~----~~l~s~~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+++|+|++ ++|++++.|++|++||+.+.. ....+..|...|.+++|+|++++||+|+.|++|++|+..
T Consensus 216 ~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999986 799999999999999997631 223456789999999999999999999999999999975
No 35
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-34 Score=266.06 Aligned_cols=305 Identities=17% Similarity=0.226 Sum_probs=216.2
Q ss_pred ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcc----cccccccccccccceeeeeeecCCCCcceeEecccCCeEEEe
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ----HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~W 91 (383)
+|.+.|++++|+|++++|++|+.|+.|++|++.+ .+.+..+..|. ..+.++.+.++ ++..|++++.|++|++|
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~-~~~~l~s~~~dg~v~iw 141 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHS--SSVKTVKFNAK-QDNVLASGGNNGEIFIW 141 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSS--SCCCEEEECSS-STTBEEEECSSSCEEBC
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCc--cceEEEEEcCC-CCCEEEEEcCCCeEEEE
Confidence 6999999999999999999999999999999976 23344433333 45788899884 35789999999999999
Q ss_pred ecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCc
Q 016769 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPK 171 (383)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (383)
|+.++............. . . ..+.. ......+.+++..
T Consensus 142 d~~~~~~~~~~~~~~~~~------------~-----~---------------------~~~~~----~v~~~~~~~~~~~ 179 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPG------------Q-----S---------------------MSSVD----EVISLAWNQSLAH 179 (416)
T ss_dssp BTTTTSSCTTTCCCBCCC------------C-----S---------------------CCSSC----CCCEEEECSSCTT
T ss_pred ECCCCccccccccccccc------------c-----c---------------------cCCCC----CeeEEEeCCCCCc
Confidence 998764110000000000 0 0 00000 0001122344334
Q ss_pred eeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC---cEEEEeCC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG---SILVWDIR 248 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg---~i~~wdl~ 248 (383)
+ +++++.++.|++||+++++.+..+...... ........++ .+.|.. ...+++++.|+ .|++||++
T Consensus 180 ~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~----~~~~~~v~~~---~~~~~~---~~~l~~~~~d~~~~~i~~~d~~ 248 (416)
T 2pm9_A 180 V-FASAGSSNFASIWDLKAKKEVIHLSYTSPN----SGIKQQLSVV---EWHPKN---STRVATATGSDNDPSILIWDLR 248 (416)
T ss_dssp E-EEEESSSSCEEEEETTTTEEEEEECCCCCS----SCCCCCEEEE---EECSSC---TTEEEEEECCSSSCCCCEEETT
T ss_pred E-EEEEcCCCCEEEEECCCCCcceEEeccccc----cccCCceEEE---EECCCC---CCEEEEEECCCCCceEEEEeCC
Confidence 4 445567899999999998877666532100 0001222222 344432 23588899998 99999999
Q ss_pred CCCCceeeee-ccccCeEEEEEeC-CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC-cEEEEE
Q 016769 249 NPGIPLTAMK-VHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KIAATA 325 (383)
Q Consensus 249 ~~~~~~~~~~-~h~~~v~~~~~~~-~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-~~l~s~ 325 (383)
+...+...+. .|...|.++.|++ ++..+++++.|+.|++||++.... ...+..+...+.+++|+|++ ++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~----~~~~~~~~~~v~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 249 NANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ----LSQFPARGNWCFKTKFAPEAPDLFACA 324 (416)
T ss_dssp STTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE----EEEEECSSSCCCCEEECTTCTTEEEEC
T ss_pred CCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc----ceeecCCCCceEEEEECCCCCCEEEEE
Confidence 8656677777 8999999999998 888899999999999999875432 22344566789999999999 899999
Q ss_pred eCCCcEEEEEcCCCceEEEe-----------------------------------cccccceeEEEEeCCCCEEEEEeCC
Q 016769 326 GWDRRVRIYNYRKGSALAIL-----------------------------------KYHHATCNAVSFSSDCKLMASASED 370 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~~~~~~-----------------------------------~~h~~~v~~v~~spd~~~las~s~d 370 (383)
+.|++|++||+.+++..... ..|...+.+++|+|||++||+|+.|
T Consensus 325 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d 404 (416)
T 2pm9_A 325 SFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDG 404 (416)
T ss_dssp CSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTS
T ss_pred ecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCC
Confidence 99999999999775432111 1167788899999999999999999
Q ss_pred CcEEEEeCCC
Q 016769 371 STVALWELYP 380 (383)
Q Consensus 371 ~~i~~w~~~~ 380 (383)
+.|+||++..
T Consensus 405 ~~v~~w~~~~ 414 (416)
T 2pm9_A 405 KGVSITNPKI 414 (416)
T ss_dssp SCBCCBCCCC
T ss_pred CeEEEEEecc
Confidence 9999999964
No 36
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.9e-33 Score=257.26 Aligned_cols=295 Identities=16% Similarity=0.246 Sum_probs=211.2
Q ss_pred CCCCCeeeeeecCCceeeEEEeCC---CCeEEEecCCCeEEEeeCcc-cccc-cccccccccceeeeeeecCCCCcceeE
Q 016769 6 PPPDPVAVLRGHRASVTDVCFHQT---KPILFAGTTGGELRIWDTVQ-HRTV-SSSWVHSAAHGIVSVATGPSIGLNKVI 80 (383)
Q Consensus 6 ~~~~~~~~l~gH~~~V~~v~f~~~---~~~L~sgs~D~~v~vW~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (383)
.|.+++..+.+|.+.|++|+|+|+ |++|++|+.||.|+|||+.+ ++.+ ..+..| ...+.++++.+ ++..|+
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~~~--~~~~l~ 102 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH--TGPVLDVCWSD--DGSKVF 102 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC--SSCEEEEEECT--TSSEEE
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc--cCCEEEEEECc--CCCEEE
Confidence 566788899999999999999999 69999999999999999986 3333 333333 34688899998 468899
Q ss_pred ecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccc
Q 016769 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFE 160 (383)
Q Consensus 81 s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
+++.|++|++||++++... ....+ .. .+.
T Consensus 103 s~~~dg~v~iwd~~~~~~~-----~~~~~----------~~------------~v~------------------------ 131 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAI-----QIAQH----------DA------------PVK------------------------ 131 (368)
T ss_dssp EEETTSEEEEEETTTTEEE-----EEEEC----------SS------------CEE------------------------
T ss_pred EEcCCCcEEEEEcCCCCce-----eeccc----------cC------------ceE------------------------
Confidence 9999999999999876311 00000 00 000
Q ss_pred eeccc--CCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeC
Q 016769 161 IIDDV--PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 238 (383)
Q Consensus 161 ~~~~~--~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~ 238 (383)
...+ .+++ . ++++++.|+.|++||+++++.+..+..+. ...+.. +.. ..+++++.
T Consensus 132 -~~~~~~~~~~-~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-----------~~~~~~---~~~------~~~~~~~~ 188 (368)
T 3mmy_A 132 -TIHWIKAPNY-S-CVMTGSWDKTLKFWDTRSSNPMMVLQLPE-----------RCYCAD---VIY------PMAVVATA 188 (368)
T ss_dssp -EEEEEECSSC-E-EEEEEETTSEEEEECSSCSSCSEEEECSS-----------CEEEEE---EET------TEEEEEEG
T ss_pred -EEEEEeCCCC-C-EEEEccCCCcEEEEECCCCcEEEEEecCC-----------CceEEE---ecC------CeeEEEeC
Confidence 0011 1222 2 34456678999999999988776665321 122221 111 14678889
Q ss_pred CCcEEEEeCCCCCCceeeee-ccccCeEEEEEeCCCCc----eEEEEcCCcEEEEEccCCCC-eeEEeeeeecCCC----
Q 016769 239 DGSILVWDIRNPGIPLTAMK-VHLEPVLCLSIDESCNG----GISGGADQKIVLYNLDHSTG-SCVIKKEINLERP---- 308 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~-~h~~~v~~~~~~~~~~~----~~s~~~d~~i~~wdl~~~~~-~~~~~~~~~~~~~---- 308 (383)
++.+++||++.......... .+...+.++.+...... +++++.|+.|++||++.... ... .....+..
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~--~~~~~~~~~~~~ 266 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDN--FTFKCHRSNGTN 266 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHS--EEEECSEEC---
T ss_pred CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccc--eeeeeeeccccc
Confidence 99999999987543332222 22344555655444333 89999999999999986532 111 11222222
Q ss_pred --------CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 309 --------GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 309 --------~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.+.+++|+|++++|++++.||.|++||+.+++.+..+.+|...|.+++|+|||++||+|+.|+..+.|++++
T Consensus 267 ~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 267 TSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp -CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred ccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccccC
Confidence 599999999999999999999999999999999999999999999999999999999999999877777654
No 37
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.7e-32 Score=254.71 Aligned_cols=279 Identities=17% Similarity=0.250 Sum_probs=202.4
Q ss_pred eeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCC
Q 016769 21 VTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSS 100 (383)
Q Consensus 21 V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~ 100 (383)
.+.|+|+++ ++|+.| .|++|+|||+.++++...+..+.+...|.+++|++ ++++|++|+.|++|++||+++++...
T Consensus 108 ~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp--dg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK--EGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp CBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT--TSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECC--CCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 456899976 477765 59999999999887766554444445689999998 47899999999999999998764211
Q ss_pred CCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCc
Q 016769 101 NPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQL 180 (383)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 180 (383)
.+..+... +..+..++ . ++++|+.+
T Consensus 184 ----~~~~h~~~-------------------------------------------------v~~~s~~~-~-~l~sgs~d 208 (420)
T 4gga_A 184 ----NMTSHSAR-------------------------------------------------VGSLSWNS-Y-ILSSGSRS 208 (420)
T ss_dssp ----EECCCSSC-------------------------------------------------EEEEEEET-T-EEEEEETT
T ss_pred ----EEeCCCCc-------------------------------------------------eEEEeeCC-C-EEEEEeCC
Confidence 10000000 00011111 2 45667788
Q ss_pred ceEEEEecCCCCe-eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC---ceee
Q 016769 181 SEVEIWDLNTAER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI---PLTA 256 (383)
Q Consensus 181 ~~i~~Wdl~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~---~~~~ 256 (383)
+.+++||...... +..+..+ ...... ..+.+.. ..+++++.|+.|++||+.+... .+..
T Consensus 209 ~~i~~~d~~~~~~~~~~~~~h----------~~~~~~---~~~~~~g----~~l~s~~~D~~v~i~~~~~~~~~~~~~~~ 271 (420)
T 4gga_A 209 GHIHHHDVRVAEHHVATLSGH----------SQEVCG---LRWAPDG----RHLASGGNDNLVNVWPSAPGEGGWVPLQT 271 (420)
T ss_dssp SEEEEEETTSSSCEEEEEECC----------SSCEEE---EEECTTS----SEEEEEETTSCEEEEESSCCSSCSCCSEE
T ss_pred CceeEeeecccceeeEEeccc----------ccceee---eeecCCC----CeeeeeeccccceEEeeccccccceeeee
Confidence 9999999987653 3333321 111111 1233332 3588999999999999976432 3455
Q ss_pred eeccccCeEEEEEeCCCCce-EE--EEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe--CCCcE
Q 016769 257 MKVHLEPVLCLSIDESCNGG-IS--GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG--WDRRV 331 (383)
Q Consensus 257 ~~~h~~~v~~~~~~~~~~~~-~s--~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~--~dg~i 331 (383)
...|..+|.++.|.+....+ ++ |+.|+.|++||+.... ... ... ....+.++.|+|+++.+++++ .|++|
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~--~~~--~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I 346 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA--CLS--AVD-AHSQVCSILWSPHYKELISGHGFAQNQL 346 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE--EEE--EEE-CSSCEEEEEEETTTTEEEEEECTTTCCE
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc--cce--eec-cccceeeeeecCCCCeEEEEEecCCCEE
Confidence 67788999999998876654 33 4579999999997543 222 222 235688999999999888776 79999
Q ss_pred EEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 332 RIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 332 ~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
++||+.+++++..+.+|...|.+++|+|||++|||||.|++|+|||+++
T Consensus 347 ~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 347 VIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 9999999999999999999999999999999999999999999999974
No 38
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-32 Score=256.91 Aligned_cols=297 Identities=15% Similarity=0.180 Sum_probs=213.2
Q ss_pred ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCC
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~ 95 (383)
+|.+.|++++|+|++++|++|+.|+.|++|| .+++.+..+..|. ..+.++.+.+ ++..|++++.|+++++||+++
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHR--APIVSVKWNK--DGTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCC--SCEEEEEECT--TSSEEEEEETTCCEEEEETTT
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCC--ccEEEEEECC--CCCEEEEEecCCeEEEEECCC
Confidence 3789999999999999999999999999999 4455555444343 4578889988 467899999999999999987
Q ss_pred CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeee
Q 016769 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAV 175 (383)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (383)
+.... .+..... ..... . .. .. ... ........+.++ . .+ +
T Consensus 181 ~~~~~----~~~~~~~----------~~~~~-~------~~--~~---------~~~----~~~~~~~~~~~~-~-~~-~ 221 (425)
T 1r5m_A 181 GTVMQ----HFELKET----------GGSSI-N------AE--NH---------SGD----GSLGVDVEWVDD-D-KF-V 221 (425)
T ss_dssp TEEEE----EECCC-----------------------------------------------CCCBSCCEEEET-T-EE-E
T ss_pred CcEEE----Eeecccc----------Cccce-e------ec--cc---------cCC----cceeeEEEEcCC-C-EE-E
Confidence 63211 1000000 00000 0 00 00 000 000000011122 2 23 4
Q ss_pred ccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCcee
Q 016769 176 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 255 (383)
Q Consensus 176 ~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~ 255 (383)
+++.++.|++||+++++.+..+..+ .....++ .+.+.. ..+++++.|+.|++||+++. ....
T Consensus 222 ~~~~~g~i~~~d~~~~~~~~~~~~~----------~~~i~~~---~~~~~~----~~l~~~~~d~~i~i~d~~~~-~~~~ 283 (425)
T 1r5m_A 222 IPGPKGAIFVYQITEKTPTGKLIGH----------HGPISVL---EFNDTN----KLLLSASDDGTLRIWHGGNG-NSQN 283 (425)
T ss_dssp EECGGGCEEEEETTCSSCSEEECCC----------SSCEEEE---EEETTT----TEEEEEETTSCEEEECSSSB-SCSE
T ss_pred EEcCCCeEEEEEcCCCceeeeeccC----------CCceEEE---EECCCC----CEEEEEcCCCEEEEEECCCC-ccce
Confidence 4566899999999998776655421 1122222 244432 26889999999999999874 4466
Q ss_pred eeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEE
Q 016769 256 AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 335 (383)
Q Consensus 256 ~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd 335 (383)
.+..|..++.++.|++++ .+++++.|+.|++||+.... .. .....+...+.+++|+|++++|++++.||.|++||
T Consensus 284 ~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~--~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~ 358 (425)
T 1r5m_A 284 CFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT--LL--ALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYD 358 (425)
T ss_dssp EECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE--EE--EEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc--Ee--EecccCCccEEEEEEcCCCCEEEEEECCCeEEEEE
Confidence 777899999999999988 88999999999999997543 22 23345567899999999999999999999999999
Q ss_pred cCCCc--------------------eEEEeccccc--ceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 336 YRKGS--------------------ALAILKYHHA--TCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 336 ~~~~~--------------------~~~~~~~h~~--~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+.+++ .+..+.+|.. .|.+++|+|++++|++++.||.|++||+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 359 LKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred CCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 98887 7889999977 99999999999999999999999999984
No 39
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-33 Score=260.77 Aligned_cols=298 Identities=14% Similarity=0.202 Sum_probs=211.8
Q ss_pred cCCceeeEEEeCCCC-eEEEe----------cCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccC
Q 016769 17 HRASVTDVCFHQTKP-ILFAG----------TTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 17 H~~~V~~v~f~~~~~-~L~sg----------s~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
|...|++++|+|+++ +|++| +.|+.|+|||+.++.....+........+.+++|++ ++..|++++.|
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d 88 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSH--NNKIIAGALDN 88 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECS--SSSCEEEEESS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECC--CCCeEEEEccC
Confidence 457899999999987 99999 899999999998765321111111234688999988 46889999999
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
++|++||+.+..........+.. .. ..+ ....+
T Consensus 89 g~v~vw~~~~~~~~~~~~~~~~~-------------h~---------~~v-------------------------~~~~~ 121 (416)
T 2pm9_A 89 GSLELYSTNEANNAINSMARFSN-------------HS---------SSV-------------------------KTVKF 121 (416)
T ss_dssp SCEEEECCSSTTSCCCEEEECCC-------------SS---------SCC-------------------------CEEEE
T ss_pred CeEEEeecccccccccchhhccC-------------Cc---------cce-------------------------EEEEE
Confidence 99999999763211000000000 00 000 00112
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCC------eeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCC
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAE------RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 239 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~d 239 (383)
.+++..++ ++++.++.|++||+++.+ ....+.. ...+.....++. +.+.. ...+++++.|
T Consensus 122 ~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-------~~~~~~~v~~~~---~~~~~---~~~l~~~~~d 187 (416)
T 2pm9_A 122 NAKQDNVL-ASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ-------SMSSVDEVISLA---WNQSL---AHVFASAGSS 187 (416)
T ss_dssp CSSSTTBE-EEECSSSCEEBCBTTTTSSCTTTCCCBCCCC-------SCCSSCCCCEEE---ECSSC---TTEEEEESSS
T ss_pred cCCCCCEE-EEEcCCCeEEEEECCCCcccccccccccccc-------ccCCCCCeeEEE---eCCCC---CcEEEEEcCC
Confidence 33323344 456678999999998876 2222210 001122233322 44431 2358899999
Q ss_pred CcEEEEeCCCCCCceeeeecc------ccCeEEEEEeCCC-CceEEEEcCC---cEEEEEccCCCCeeEEeeeee-cCCC
Q 016769 240 GSILVWDIRNPGIPLTAMKVH------LEPVLCLSIDESC-NGGISGGADQ---KIVLYNLDHSTGSCVIKKEIN-LERP 308 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~~h------~~~v~~~~~~~~~-~~~~s~~~d~---~i~~wdl~~~~~~~~~~~~~~-~~~~ 308 (383)
+.|++||+++. ..+..+..| ..++.++.|++++ ..+++++.|+ .|++||++...... ..+. .+..
T Consensus 188 g~v~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~---~~~~~~~~~ 263 (416)
T 2pm9_A 188 NFASIWDLKAK-KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPL---QTLNQGHQK 263 (416)
T ss_dssp SCEEEEETTTT-EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCS---BCCCSCCSS
T ss_pred CCEEEEECCCC-CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCc---EEeecCccC
Confidence 99999999874 345556555 7889999999987 4678899998 99999998642211 1233 4667
Q ss_pred CeEEEEECC-CCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCC-CEEEEEeCCCcEEEEeCCCC
Q 016769 309 GISGTSIRP-DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDC-KLMASASEDSTVALWELYPP 381 (383)
Q Consensus 309 ~i~~~~~~p-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~-~~las~s~d~~i~~w~~~~~ 381 (383)
.+.+++|+| ++++|++++.|++|++||+.+++.+..+.+|...|.+++|+|++ ++|++++.|+.|++||+...
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 899999999 89999999999999999999999999999999999999999999 79999999999999999643
No 40
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.8e-32 Score=243.58 Aligned_cols=243 Identities=21% Similarity=0.330 Sum_probs=183.5
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+.+++|+| ++..|++++.|++|++||++++.... .+..+ ..+ +
T Consensus 14 ~~V~~~~fsp--~~~~l~s~~~dg~v~lWd~~~~~~~~----~~~~~----------~~~------------v------- 58 (304)
T 2ynn_A 14 DRVKGIDFHP--TEPWVLTTLYSGRVELWNYETQVEVR----SIQVT----------ETP------------V------- 58 (304)
T ss_dssp SCEEEEEECS--SSSEEEEEETTSEEEEEETTTTEEEE----EEECC----------SSC------------E-------
T ss_pred CceEEEEECC--CCCEEEEEcCCCcEEEEECCCCceeE----Eeecc----------CCc------------E-------
Confidence 4688999999 46889999999999999998763210 10000 000 0
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEee
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAY 222 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 222 (383)
....+.+++ ++ +++|+.|++|++||+++++.+..+..+ ...+.++ .+
T Consensus 59 ------------------~~~~~~~~~-~~-l~s~s~d~~i~vwd~~~~~~~~~~~~h----------~~~v~~~---~~ 105 (304)
T 2ynn_A 59 ------------------RAGKFIARK-NW-IIVGSDDFRIRVFNYNTGEKVVDFEAH----------PDYIRSI---AV 105 (304)
T ss_dssp ------------------EEEEEEGGG-TE-EEEEETTSEEEEEETTTCCEEEEEECC----------SSCEEEE---EE
T ss_pred ------------------EEEEEeCCC-CE-EEEECCCCEEEEEECCCCcEEEEEeCC----------CCcEEEE---EE
Confidence 000112233 23 445677899999999999887776532 1222232 24
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeC-CCCceEEEEcCCcEEEEEccCCCCeeEEee
Q 016769 223 LPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTGSCVIKK 301 (383)
Q Consensus 223 ~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~ 301 (383)
.|.. ..+++|+.|++|++||+++.......+.+|..+|.+++|+| ++..+++|+.|+.|++||+........+
T Consensus 106 ~~~~----~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~-- 179 (304)
T 2ynn_A 106 HPTK----PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL-- 179 (304)
T ss_dssp CSSS----SEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEE--
T ss_pred cCCC----CEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcccee--
Confidence 4442 36889999999999999875555667889999999999998 4567899999999999999755433222
Q ss_pred eeecCCCCeEEEEECC--CCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 302 EINLERPGISGTSIRP--DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 302 ~~~~~~~~i~~~~~~p--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
...+...+..+.|+| ++++|++|+.|++|++||+++++.+.++.+|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 180 -~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 180 -TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp -ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred -ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 123345688888876 77899999999999999999999999999999999999999999999999999999999986
Q ss_pred C
Q 016769 380 P 380 (383)
Q Consensus 380 ~ 380 (383)
.
T Consensus 259 ~ 259 (304)
T 2ynn_A 259 T 259 (304)
T ss_dssp T
T ss_pred C
Confidence 4
No 41
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.4e-32 Score=253.49 Aligned_cols=291 Identities=13% Similarity=0.201 Sum_probs=209.3
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc--cccccccccccceeeeeeecCCCCcceeEecccCCeEEE
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~ 90 (383)
.+..|.++|++++|+|++++|++|+.|+.|++||..+++ .+..+..|. ..+.++++.+ +++.|++++.|++|++
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~~~~~dg~i~v 78 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN--GQVTGVDWAP--DSNRIVTCGTDRNAYV 78 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS--SCEEEEEEET--TTTEEEEEETTSCEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCC--CcccEEEEeC--CCCEEEEEcCCCeEEE
Confidence 566799999999999999999999999999999998765 555444443 4678889988 4688999999999999
Q ss_pred eecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCC
Q 016769 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGP 170 (383)
Q Consensus 91 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (383)
||+++++... .. .+.. . ... .....+.+++
T Consensus 79 wd~~~~~~~~----~~----------~~~~-~---------~~~-------------------------v~~~~~~~~~- 108 (372)
T 1k8k_C 79 WTLKGRTWKP----TL----------VILR-I---------NRA-------------------------ARCVRWAPNE- 108 (372)
T ss_dssp EEEETTEEEE----EE----------ECCC-C---------SSC-------------------------EEEEEECTTS-
T ss_pred EECCCCeeee----eE----------Eeec-C---------CCc-------------------------eeEEEECCCC-
Confidence 9997653100 00 0000 0 000 0001123343
Q ss_pred ceeeeccCCcceEEEEecCCCCe---eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAER---CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
++++ +++.++.|++||++.... ...+.. .+.....++ .+.|+. ..+++++.|+.|++||+
T Consensus 109 ~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~~~---------~~~~~i~~~---~~~~~~----~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 109 KKFA-VGSGSRVISICYFEQENDWWVCKHIKK---------PIRSTVLSL---DWHPNS----VLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp SEEE-EEETTSSEEEEEEETTTTEEEEEEECT---------TCCSCEEEE---EECTTS----SEEEEEETTSCEEEEEC
T ss_pred CEEE-EEeCCCEEEEEEecCCCcceeeeeeec---------ccCCCeeEE---EEcCCC----CEEEEEcCCCCEEEEEc
Confidence 3344 455679999999988763 222211 111222222 244432 36889999999999997
Q ss_pred CC-----------------CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 248 RN-----------------PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 248 ~~-----------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
+. ....+..+..|..++.++.|++++..+++++.|+.|++||++.... . ..+..+...+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~--~~~~~~~~~v 247 (372)
T 1k8k_C 172 YIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA--V--ATLASETLPL 247 (372)
T ss_dssp CCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE--E--EEEECSSCCE
T ss_pred ccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCce--e--EEEccCCCCe
Confidence 41 2345667778999999999999999999999999999999975542 2 2334566689
Q ss_pred EEEEECCCCcEEEEEeCCCcEEEEEcCC--Cc--------------------------------eE------EEe-cccc
Q 016769 311 SGTSIRPDSKIAATAGWDRRVRIYNYRK--GS--------------------------------AL------AIL-KYHH 349 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~dg~i~iwd~~~--~~--------------------------------~~------~~~-~~h~ 349 (383)
.+++|+|++++++++ .|+.|++||+.. ++ .. ..+ .+|.
T Consensus 248 ~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 326 (372)
T 1k8k_C 248 LAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHK 326 (372)
T ss_dssp EEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSS
T ss_pred EEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccccccc
Confidence 999999999988877 999999999987 42 00 223 4899
Q ss_pred cceeEEEEe-CCC---CEEEEEeCCCcEEEEeCC
Q 016769 350 ATCNAVSFS-SDC---KLMASASEDSTVALWELY 379 (383)
Q Consensus 350 ~~v~~v~~s-pd~---~~las~s~d~~i~~w~~~ 379 (383)
..|.+++|+ ++| ++|+||+.||.|++||+.
T Consensus 327 ~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 327 NSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp SCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred CCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 999999966 677 999999999999999974
No 42
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-32 Score=254.78 Aligned_cols=299 Identities=16% Similarity=0.233 Sum_probs=212.6
Q ss_pred eeeee--ecCCceeeEEEeCCCC-eEEEecCCCeEEEeeC----ccccc------cccccccc--------ccceeeeee
Q 016769 11 VAVLR--GHRASVTDVCFHQTKP-ILFAGTTGGELRIWDT----VQHRT------VSSSWVHS--------AAHGIVSVA 69 (383)
Q Consensus 11 ~~~l~--gH~~~V~~v~f~~~~~-~L~sgs~D~~v~vW~~----~~~~~------~~~~~~~~--------~~~~~~~~~ 69 (383)
..++. .|.+.|++++|+|+++ +|++|+.|+.|++|++ .+++. ...+.... ....+.+++
T Consensus 36 ~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 36 VKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp CEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred hhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence 34444 5569999999999999 9999999999999999 76662 22221100 123688899
Q ss_pred ecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCcc
Q 016769 70 TGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSL 149 (383)
Q Consensus 70 ~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (383)
+++ ++..|++++.|++|++||. ++.. ...+..+. ..+
T Consensus 116 ~s~--~~~~l~~~~~dg~i~i~~~-~~~~----~~~~~~~~----------------------~~v-------------- 152 (425)
T 1r5m_A 116 WSH--DGNSIVTGVENGELRLWNK-TGAL----LNVLNFHR----------------------API-------------- 152 (425)
T ss_dssp ECT--TSSEEEEEETTSCEEEEET-TSCE----EEEECCCC----------------------SCE--------------
T ss_pred EcC--CCCEEEEEeCCCeEEEEeC-CCCe----eeeccCCC----------------------ccE--------------
Confidence 998 4688999999999999993 3321 00100000 000
Q ss_pred ccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCC----CCcCCCC-CceeeEEEeecC
Q 016769 150 CDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGS----PNFSSKG-RGMCMAVQAYLP 224 (383)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s----~~~~~~~-~~~~~~~~~~~~ 224 (383)
....+.+++. +++ +++.++.|++||+++++.+..+........ ..+...+ ...++. +.+
T Consensus 153 -----------~~~~~~~~~~-~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 216 (425)
T 1r5m_A 153 -----------VSVKWNKDGT-HII-SMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVE---WVD 216 (425)
T ss_dssp -----------EEEEECTTSS-EEE-EEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCE---EEE
T ss_pred -----------EEEEECCCCC-EEE-EEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEE---EcC
Confidence 0011223333 344 455689999999999887766653221100 0000000 012222 222
Q ss_pred CCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee
Q 016769 225 SKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN 304 (383)
Q Consensus 225 ~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~ 304 (383)
. ..+++++.|+.|++||+++. .++..+..|..+|.++.|++++..+++++.|+.|++||++...... ...
T Consensus 217 ~-----~~~~~~~~~g~i~~~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~ 286 (425)
T 1r5m_A 217 D-----DKFVIPGPKGAIFVYQITEK-TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQN----CFY 286 (425)
T ss_dssp T-----TEEEEECGGGCEEEEETTCS-SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSE----EEC
T ss_pred C-----CEEEEEcCCCeEEEEEcCCC-ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccce----Eec
Confidence 2 24788999999999999874 4566778899999999999999999999999999999987644322 233
Q ss_pred cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 305 LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 305 ~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+...+.+++|+|++ ++++++.|+.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 287 ~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 287 GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 456789999999999 99999999999999999999999999999999999999999999999999999999984
No 43
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-32 Score=250.73 Aligned_cols=261 Identities=18% Similarity=0.210 Sum_probs=193.8
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCc--ccccccccccccccceeeeeeecCCCCcceeEecccCC
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ 86 (383)
+++.++.+|.+.|++++|+|++++|++|+.||.|+|||+. +.+.+..+..|. ..+.++++.+..++..|++++.|+
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHE--GPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCS--SCEEEEEECCGGGCSEEEEEETTS
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCC--CcEEEEEeCCCCCCCEEEEeccCC
Confidence 3567899999999999999999999999999999999987 444444444443 457888887643368899999999
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
+|++||++++... .+ ..+
T Consensus 80 ~v~iwd~~~~~~~-----~~---------~~~------------------------------------------------ 97 (379)
T 3jrp_A 80 KVLIWKEENGRWS-----QI---------AVH------------------------------------------------ 97 (379)
T ss_dssp CEEEEEEETTEEE-----EE---------EEE------------------------------------------------
T ss_pred EEEEEEcCCCcee-----Ee---------eee------------------------------------------------
Confidence 9999998765200 00 000
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
.+ ....| .++ .+.|.. ....+++++.|+.|++||
T Consensus 98 ---------~~-~~~~v-------------------------------~~~---~~~~~~--~~~~l~~~~~d~~i~v~d 131 (379)
T 3jrp_A 98 ---------AV-HSASV-------------------------------NSV---QWAPHE--YGPLLLVASSDGKVSVVE 131 (379)
T ss_dssp ---------CC-CSSCE-------------------------------EEE---EECCGG--GCSEEEEEETTSEEEEEE
T ss_pred ---------cC-CCcce-------------------------------EEE---EeCCCC--CCCEEEEecCCCcEEEEe
Confidence 00 00000 000 111110 011477889999999999
Q ss_pred CCCCCC-ceeeeeccccCeEEEEEeC-------------CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 247 IRNPGI-PLTAMKVHLEPVLCLSIDE-------------SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 247 l~~~~~-~~~~~~~h~~~v~~~~~~~-------------~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
+++... ....+..|..+|.++.|++ ++..+++++.|+.|++||+............+..+...+.+
T Consensus 132 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~ 211 (379)
T 3jrp_A 132 FKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD 211 (379)
T ss_dssp CCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE
T ss_pred cCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeE
Confidence 887532 3345677889999999998 57889999999999999998665544444455667788999
Q ss_pred EEECCC---CcEEEEEeCCCcEEEEEcCCCc---eEE--EecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 313 TSIRPD---SKIAATAGWDRRVRIYNYRKGS---ALA--ILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 313 ~~~~p~---~~~l~s~~~dg~i~iwd~~~~~---~~~--~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++|+|+ +++|++++.||+|++||+.++. ... ....|...|.+++|+|++++|++++.||.|++|++.
T Consensus 212 ~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 212 VAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred EEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 999999 8999999999999999998864 222 223488899999999999999999999999999985
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.6e-33 Score=258.56 Aligned_cols=295 Identities=12% Similarity=0.133 Sum_probs=196.3
Q ss_pred eeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccc--ccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH--RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
.+++.|.++|++++|+|++++|++|+.|+.|+|||+.++ +++..+..|. ..+.+++++++ ++.|++++.|++|+
T Consensus 5 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~s~~--~~~l~s~s~d~~v~ 80 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHD--KIVTCVDWAPK--SNRIVTCSQDRNAY 80 (377)
T ss_dssp EEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCS--SCEEEEEECTT--TCCEEEEETTSSEE
T ss_pred eeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCC--ceEEEEEEeCC--CCEEEEEeCCCeEE
Confidence 456778899999999999999999999999999999876 5555554443 46888999984 68899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+||++++.... +...+..+ ... .....+.+++
T Consensus 81 vwd~~~~~~~~-~~~~~~~~----------------------~~~-------------------------v~~~~~~~~~ 112 (377)
T 3dwl_C 81 VYEKRPDGTWK-QTLVLLRL----------------------NRA-------------------------ATFVRWSPNE 112 (377)
T ss_dssp EC------CCC-CEEECCCC----------------------SSC-------------------------EEEEECCTTS
T ss_pred EEEcCCCCcee-eeeEeccc----------------------CCc-------------------------eEEEEECCCC
Confidence 99998763100 00000000 000 0001123333
Q ss_pred CceeeeccCCcceEEEEecCCCCe---eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAER---CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
. + +++++.++.|++||+++++. ...+... +...+.++ .+.|+. ..+++++.|++|++||
T Consensus 113 ~-~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---------h~~~v~~~---~~~~~~----~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 113 D-K-FAVGSGARVISVCYFEQENDWWVSKHLKRP---------LRSTILSL---DWHPNN----VLLAAGCADRKAYVLS 174 (377)
T ss_dssp S-C-CEEEESSSCEEECCC-----CCCCEEECSS---------CCSCEEEE---EECTTS----SEEEEEESSSCEEEEE
T ss_pred C-E-EEEEecCCeEEEEEECCcccceeeeEeecc---------cCCCeEEE---EEcCCC----CEEEEEeCCCEEEEEE
Confidence 3 3 34556689999999988763 3334320 11222232 244432 3688999999999999
Q ss_pred CCCC-----------------CCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 247 IRNP-----------------GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 247 l~~~-----------------~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
++.. ..++..+ .|..+|.++.|++++..+++++.|+.|++||+............+..+...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 253 (377)
T 3dwl_C 175 AYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLP 253 (377)
T ss_dssp ECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSC
T ss_pred EEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCc
Confidence 8531 1223344 788999999999999999999999999999998765432223345566778
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCc---------------------------------------eEE-------
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGS---------------------------------------ALA------- 343 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~---------------------------------------~~~------- 343 (383)
+.+++|+|++++|++++.|+.+ +|+..... ...
T Consensus 254 v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 332 (377)
T 3dwl_C 254 LRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGS 332 (377)
T ss_dssp EEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---------------------
T ss_pred eEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccc
Confidence 9999999999999988766655 67664211 000
Q ss_pred ------EecccccceeEEEEeCCC-C---EEEEEeCCCcEEEEeC
Q 016769 344 ------ILKYHHATCNAVSFSSDC-K---LMASASEDSTVALWEL 378 (383)
Q Consensus 344 ------~~~~h~~~v~~v~~spd~-~---~las~s~d~~i~~w~~ 378 (383)
....|.+.|.++++.++. . .|+|||.||.|++||+
T Consensus 333 ~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 333 SQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ----CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 011399999999976544 3 6999999999999996
No 45
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.5e-32 Score=249.99 Aligned_cols=320 Identities=13% Similarity=0.126 Sum_probs=193.4
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccc----ccccccccccceeeeeeecCCCCcceeEeccc
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT----VSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (383)
.....+.||++.|++|+|+|++++|++|+.||.|++||+.++.. ...+..| ...+.++++.+..++..|++++.
T Consensus 2 ~~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~d~~~l~s~~~ 79 (351)
T 3f3f_A 2 HMQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH--DSSIVAIDWASPEYGRIIASASY 79 (351)
T ss_dssp CCCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC--SSCEEEEEECCGGGCSEEEEEET
T ss_pred CccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccC--CCcEEEEEEcCCCCCCEEEEEcC
Confidence 44567899999999999999999999999999999999876532 2222223 34688899987423578999999
Q ss_pred CCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
|++|++||++++....... . .......... ...+ ....
T Consensus 80 dg~v~vwd~~~~~~~~~~~------~--~~~~~~~~~~---------~~~v-------------------------~~~~ 117 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGR------R--WNKLCTLNDS---------KGSL-------------------------YSVK 117 (351)
T ss_dssp TSCEEEEEECTTSCTTSSC------S--EEEEEEECCC---------SSCE-------------------------EEEE
T ss_pred CCeEEEEecCCCccccccc------C--cceeeeeccc---------CCce-------------------------eEEE
Confidence 9999999998764211000 0 0000000000 0000 0011
Q ss_pred cCCCC-CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCc---CCCCCceeeEEEeecCCCCCCceEEEEEeCCC
Q 016769 165 VPAEG-PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNF---SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 240 (383)
Q Consensus 165 ~~~~~-~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg 240 (383)
+.++. ..+ +++++.++.|++||+++++.+..+........... .......++ .+.|.... ...+++++.|+
T Consensus 118 ~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~-~~~l~~~~~~~ 192 (351)
T 3f3f_A 118 FAPAHLGLK-LACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCL---SWCPSRFS-PEKLAVSALEQ 192 (351)
T ss_dssp ECCGGGCSE-EEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEE---EECCCSSS-CCEEEEEETTE
T ss_pred EcCCCCCcE-EEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEE---EeccCCCC-CcEEEEecCCC
Confidence 22321 233 34556789999999988775433321100000011 111222232 34443211 23688899999
Q ss_pred cEEEEeCCCCCC-ceeeeeccccCeEEEEEeCCC----CceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEE
Q 016769 241 SILVWDIRNPGI-PLTAMKVHLEPVLCLSIDESC----NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSI 315 (383)
Q Consensus 241 ~i~~wdl~~~~~-~~~~~~~h~~~v~~~~~~~~~----~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~ 315 (383)
.+.+|+...... .+..+..|..+|.++.|++++ ..+++++.|+.|++||+........... ..........
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~~~ 268 (351)
T 3f3f_A 193 AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEE----SLTNSNMFDN 268 (351)
T ss_dssp EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------
T ss_pred cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCC----cccceeccCC
Confidence 998888765432 256677899999999999997 6799999999999999975432211111 1111222222
Q ss_pred CCCCcEE----EEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 316 RPDSKIA----ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 316 ~p~~~~l----~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
.+....+ ..+.....+.+|+....+.+..+.+|...|.+++|+|++++|++|+.|+.|++||+..+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 269 SADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp ----------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred CcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcC
Confidence 3333332 33344556667777777788889999999999999999999999999999999999754
No 46
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.9e-31 Score=252.78 Aligned_cols=303 Identities=17% Similarity=0.246 Sum_probs=210.2
Q ss_pred CCCCeeeeeecCCce-eeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccC
Q 016769 7 PPDPVAVLRGHRASV-TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 7 ~~~~~~~l~gH~~~V-~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
...+..+|.+|.+.| .+++| ++++|+||+.||+|++||+.+++.+..+..|. ..+.++.+.+. ..+++++.|
T Consensus 110 ~~~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~--~~V~~l~~~~~---~~l~s~s~d 182 (464)
T 3v7d_B 110 FVPQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHD--GGVWALKYAHG---GILVSGSTD 182 (464)
T ss_dssp CCCEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEECST---TEEEEEETT
T ss_pred cCcceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCC--cCEEEEEEcCC---CEEEEEeCC
Confidence 334567899999886 55555 56799999999999999998888776665554 46888888873 489999999
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
++|++||+++++.. ..+..+... +. . ..+
T Consensus 183 g~i~vwd~~~~~~~----~~~~~h~~~----------------------v~------------------------~-l~~ 211 (464)
T 3v7d_B 183 RTVRVWDIKKGCCT----HVFEGHNST----------------------VR------------------------C-LDI 211 (464)
T ss_dssp SCEEEEETTTTEEE----EEECCCSSC----------------------EE------------------------E-EEE
T ss_pred CCEEEEECCCCcEE----EEECCCCCc----------------------cE------------------------E-EEE
Confidence 99999999876321 011000000 00 0 001
Q ss_pred CC-CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCC--------ceeeEEEeecCCCCCCceEEEEE
Q 016769 166 PA-EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGR--------GMCMAVQAYLPSKSQGFVNVLAG 236 (383)
Q Consensus 166 ~~-~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~sg 236 (383)
.+ .... ++++++.|++|++||+++...................+... +....+..+.+. ...+++|
T Consensus 212 ~~~~~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~~~ 286 (464)
T 3v7d_B 212 VEYKNIK-YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGH----GNIVVSG 286 (464)
T ss_dssp EESSSCE-EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEE----TTEEEEE
T ss_pred ecCCCCC-EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCC----CCEEEEE
Confidence 11 1112 34556778999999998876433221110000000000000 000011111121 1258899
Q ss_pred eCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEEC
Q 016769 237 YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 316 (383)
Q Consensus 237 ~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~ 316 (383)
+.|+.|++||+++ ..++..+..|..+|.++.+++++..+++++.|+.|++||++... .. ..+..+...+.+++++
T Consensus 287 ~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~--~~~~~h~~~v~~~~~~ 361 (464)
T 3v7d_B 287 SYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE--LM--YTLQGHTALVGLLRLS 361 (464)
T ss_dssp ETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE--EE--EEECCCSSCEEEEEEC
T ss_pred eCCCeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--EE--EEEeCCCCcEEEEEEc
Confidence 9999999999987 44577788899999999999999999999999999999997543 22 2345567789999997
Q ss_pred CCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 317 PDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 317 p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
++++++++.||+|++||+.+++..... .|...+..++|+|++++|++|+ |+.|++||+...
T Consensus 362 --~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 362 --DKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp --SSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred --CCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC
Confidence 579999999999999999988876555 3677788899999999999999 899999998643
No 47
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.5e-32 Score=286.68 Aligned_cols=350 Identities=15% Similarity=0.198 Sum_probs=235.1
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
...++.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..|. ..+.+++|++ ++.++++++.|++|+
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~--~~v~~~~~s~--~~~~l~s~~~d~~v~ 682 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHE--DEVLCCAFSS--DDSYIATCSADKKVK 682 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS--SCEEEEEECT--TSSEEEEEETTSEEE
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCC--CCEEEEEEec--CCCEEEEEeCCCeEE
Confidence 345788999999999999999999999999999999999888777665554 4688999998 468999999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeec--cccccccc-cCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVK--EPYANAKQ-ANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
+||+.++... ..+..+........... .....+.. ..+....|+...+.... . ...+. .......+.
T Consensus 683 vwd~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~-~-~~~h~----~~v~~~~~s 752 (1249)
T 3sfz_A 683 IWDSATGKLV----HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN-T-MFGHT----NSVNHCRFS 752 (1249)
T ss_dssp EEETTTCCEE----EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE-E-ECCCS----SCEEEEEEC
T ss_pred EEECCCCceE----EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh-e-ecCCC----CCEEEEEEe
Confidence 9999887532 12222211111111111 00000000 01111112211111000 0 00000 011112344
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCc--------------CCCCCCcCCCCCceeeE--------------
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNS--------------CGGSPNFSSKGRGMCMA-------------- 218 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~--------------~~~s~~~~~~~~~~~~~-------------- 218 (383)
+++. + +++++.|+.|++||++++.....+.... .+.+..+++.+..+..+
T Consensus 753 p~~~-~-l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~ 830 (1249)
T 3sfz_A 753 PDDE-L-LASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSG 830 (1249)
T ss_dssp SSTT-E-EEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCC
T ss_pred cCCC-E-EEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCC
Confidence 5554 3 4456678999999999887655443211 11122233332221111
Q ss_pred --------------EEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCc
Q 016769 219 --------------VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQK 284 (383)
Q Consensus 219 --------------~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~ 284 (383)
...+.|. ...+++++.|+.|++||+.+ ......+.+|..+|.++.|++++..+++++.|+.
T Consensus 831 ~~~~~~~~~~~~v~~~~~sp~----~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~ 905 (1249)
T 3sfz_A 831 LLAEIHTGHHSTIQYCDFSPY----DHLAVIALSQYCVELWNIDS-RLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQT 905 (1249)
T ss_dssp EEEEEECSSSSCCCEEEECSS----TTEEEEECSSSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ceeEEcCCCCCceEEEEEcCC----CCEEEEEeCCCeEEEEEcCC-CceeeecCCCccceEEEEECCCCCEEEEEeCCCe
Confidence 0123332 23588899999999999987 4556778899999999999999999999999999
Q ss_pred EEEEEccCCCC-----------------------------eeEEee----eeecCCCCeEEEEECCCCcEEEEEeCCCcE
Q 016769 285 IVLYNLDHSTG-----------------------------SCVIKK----EINLERPGISGTSIRPDSKIAATAGWDRRV 331 (383)
Q Consensus 285 i~~wdl~~~~~-----------------------------~~~~~~----~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i 331 (383)
|++||+..... ...... ........+.+++|+|+++++++|+.||.|
T Consensus 906 v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i 985 (1249)
T 3sfz_A 906 IRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAI 985 (1249)
T ss_dssp EEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCC
T ss_pred EEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCE
Confidence 99999752100 000000 001123468999999999999999999999
Q ss_pred EEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 332 RIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 332 ~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
++||+.+++....+.+|...|.+++|+||+++|++++.|+.|++||+..
T Consensus 986 ~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 986 KIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp EEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT
T ss_pred EEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 9999999999999999999999999999999999999999999999864
No 48
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.7e-31 Score=247.59 Aligned_cols=294 Identities=16% Similarity=0.219 Sum_probs=210.3
Q ss_pred CCCCeeeee--ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEeccc
Q 016769 7 PPDPVAVLR--GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (383)
Q Consensus 7 ~~~~~~~l~--gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (383)
|..|..++. +|...++..++++++..|++++.|+.|++||..+++........ ....+.++++++ ++..|++++.
T Consensus 78 ~~~p~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~-~~~~v~~v~~s~--~~~~l~~~~~ 154 (401)
T 4aez_A 78 NTTPERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETD-ESTYVASVKWSH--DGSFLSVGLG 154 (401)
T ss_dssp CCSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECC-TTCCEEEEEECT--TSSEEEEEET
T ss_pred CCCcceeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecC-CCCCEEEEEECC--CCCEEEEECC
Confidence 444555554 89888777666666678999999999999999887765443321 234688899998 4688999999
Q ss_pred CCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 85 D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
|++|++||+++++.. ..+..+.. .+ ..
T Consensus 155 dg~i~iwd~~~~~~~----~~~~~~~~----------------------~v---------------------------~~ 181 (401)
T 4aez_A 155 NGLVDIYDVESQTKL----RTMAGHQA----------------------RV---------------------------GC 181 (401)
T ss_dssp TSCEEEEETTTCCEE----EEECCCSS----------------------CE---------------------------EE
T ss_pred CCeEEEEECcCCeEE----EEecCCCC----------------------ce---------------------------EE
Confidence 999999999876321 01100000 00 00
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCC-eeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
+..++ . ++++++.++.|++||++... .+..+..+ .+.+.++ .+.|+. ..+++|+.|+.|+
T Consensus 182 ~~~~~-~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----------~~~v~~~---~~~~~~----~~l~s~~~d~~v~ 242 (401)
T 4aez_A 182 LSWNR-H-VLSSGSRSGAIHHHDVRIANHQIGTLQGH----------SSEVCGL---AWRSDG----LQLASGGNDNVVQ 242 (401)
T ss_dssp EEEET-T-EEEEEETTSEEEEEETTSSSCEEEEEECC----------SSCEEEE---EECTTS----SEEEEEETTSCEE
T ss_pred EEECC-C-EEEEEcCCCCEEEEecccCcceeeEEcCC----------CCCeeEE---EEcCCC----CEEEEEeCCCeEE
Confidence 00111 2 34556778999999998544 44444321 1222222 244432 3688999999999
Q ss_pred EEeCCCCCCceeeeeccccCeEEEEEeCCCCceE-EEE--cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCc
Q 016769 244 VWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGG--ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK 320 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-s~~--~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~ 320 (383)
+||+++ ..+...+..|..+|.++.|++++..++ +++ .|+.|++||+..... .. .+. ....+.+++|+|+++
T Consensus 243 iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~--~~--~~~-~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 243 IWDARS-SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR--VN--TVD-AGSQVTSLIWSPHSK 316 (401)
T ss_dssp EEETTC-SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE--EE--EEE-CSSCEEEEEECSSSS
T ss_pred EccCCC-CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE--EE--EEe-CCCcEEEEEECCCCC
Confidence 999987 445667788999999999999776654 443 699999999975432 21 122 346799999999999
Q ss_pred EEEEEe--CCCcEEEEEcCCCceEE--EecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 321 IAATAG--WDRRVRIYNYRKGSALA--ILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 321 ~l~s~~--~dg~i~iwd~~~~~~~~--~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
++++++ .||.|++||+.+++... .+.+|...|.+++|+||+++|++++.|+.|++||+...
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 999954 89999999999865544 46789999999999999999999999999999999654
No 49
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.3e-32 Score=253.20 Aligned_cols=254 Identities=20% Similarity=0.339 Sum_probs=188.7
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
+...++.+|.+.|++|+|+|++++|+|||.|++|++||+.+.+++..+..|. ..+.++.+.| ++..|++++.|++|
T Consensus 141 ~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~--~~V~~v~~~p--~~~~l~s~s~D~~i 216 (410)
T 1vyh_C 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD--HNVSSVSIMP--NGDHIVSASRDKTI 216 (410)
T ss_dssp CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCS--SCEEEEEECS--SSSEEEEEETTSEE
T ss_pred cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC--CCEEEEEEeC--CCCEEEEEeCCCeE
Confidence 4567899999999999999999999999999999999998877776665554 4688899998 46889999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||++++.+.. .+..+.. .+ ....+.++
T Consensus 217 ~~wd~~~~~~~~----~~~~h~~----------------------~v-------------------------~~~~~~~~ 245 (410)
T 1vyh_C 217 KMWEVQTGYCVK----TFTGHRE----------------------WV-------------------------RMVRPNQD 245 (410)
T ss_dssp EEEETTTCCEEE----EEECCSS----------------------CE-------------------------EEEEECTT
T ss_pred EEEECCCCcEEE----EEeCCCc----------------------cE-------------------------EEEEECCC
Confidence 999998764211 1100000 00 00112233
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCC----------------CCceE
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS----------------QGFVN 232 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~ 232 (383)
+. ++++++.|++|++||++++++...+..+. ..+.++ .|.|... .....
T Consensus 246 g~--~l~s~s~D~~v~vwd~~~~~~~~~~~~h~----------~~v~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 310 (410)
T 1vyh_C 246 GT--LIASCSNDQTVRVWVVATKECKAELREHR----------HVVECI---SWAPESSYSSISEATGSETKKSGKPGPF 310 (410)
T ss_dssp SS--EEEEEETTSCEEEEETTTCCEEEEECCCS----------SCEEEE---EECCSCGGGGGGGCCSCC-------CCE
T ss_pred CC--EEEEEcCCCeEEEEECCCCceeeEecCCC----------ceEEEE---EEcCcccccchhhhccccccccCCCCCE
Confidence 32 34556778999999999988766664321 111121 1222210 01236
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
+++|+.|++|++||+++ +.++..+.+|...|.++.|++++..+++++.|+.|++||+...... ..+..+...|.+
T Consensus 311 l~sgs~D~~i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~----~~~~~h~~~v~~ 385 (410)
T 1vyh_C 311 LLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM----KTLNAHEHFVTS 385 (410)
T ss_dssp EEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC----EEEECCSSCEEE
T ss_pred EEEEeCCCeEEEEECCC-CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE----EEEcCCCCcEEE
Confidence 88999999999999987 4457788899999999999999999999999999999999754322 234556778999
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~ 337 (383)
++|+|++++|++|+.|++|++|+++
T Consensus 386 l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 386 LDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 9999999999999999999999863
No 50
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3e-31 Score=251.52 Aligned_cols=325 Identities=19% Similarity=0.299 Sum_probs=217.8
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
++...|.||.+.|.. ++++++++|++|+.||+|++||..+++++..+..|. ..+.++.+.. +.+++++.|++|
T Consensus 109 ~~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~~----~~l~s~~~dg~i 181 (445)
T 2ovr_B 109 KSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT--GGVWSSQMRD----NIIISGSTDRTL 181 (445)
T ss_dssp CCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCS--SCEEEEEEET----TEEEEEETTSCE
T ss_pred ceeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCC--CCEEEEEecC----CEEEEEeCCCeE
Confidence 456789999997643 455578999999999999999999888776665554 4577777763 689999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||+++++.. ..+..+............. .......+....++...+.... . ... ....+..+..+
T Consensus 182 ~vwd~~~~~~~----~~~~~h~~~v~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~~~-~-~~~------~~~~v~~~~~~ 248 (445)
T 2ovr_B 182 KVWNAETGECI----HTLYGHTSTVRCMHLHEKR-VVSGSRDATLRVWDIETGQCLH-V-LMG------HVAAVRCVQYD 248 (445)
T ss_dssp EEEETTTTEEE----EEECCCSSCEEEEEEETTE-EEEEETTSEEEEEESSSCCEEE-E-EEC------CSSCEEEEEEC
T ss_pred EEEECCcCcEE----EEECCCCCcEEEEEecCCE-EEEEeCCCEEEEEECCCCcEEE-E-EcC------CcccEEEEEEC
Confidence 99999887431 1222121111111111111 0000001111111111111000 0 000 00111112223
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
+. + +++++.++.|++||+++++.+..+..+ .....++. + + ...+++|+.|+.|++||++
T Consensus 249 ~~-~-l~~~~~dg~i~iwd~~~~~~~~~~~~~----------~~~v~~~~---~--~----~~~l~~~~~d~~i~i~d~~ 307 (445)
T 2ovr_B 249 GR-R-VVSGAYDFMVKVWDPETETCLHTLQGH----------TNRVYSLQ---F--D----GIHVVSGSLDTSIRVWDVE 307 (445)
T ss_dssp SS-C-EEEEETTSCEEEEEGGGTEEEEEECCC----------SSCEEEEE---E--C----SSEEEEEETTSCEEEEETT
T ss_pred CC-E-EEEEcCCCEEEEEECCCCcEeEEecCC----------CCceEEEE---E--C----CCEEEEEeCCCeEEEEECC
Confidence 33 3 445667899999999998877766421 11222222 2 1 1258899999999999998
Q ss_pred CCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC
Q 016769 249 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD 328 (383)
Q Consensus 249 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d 328 (383)
+. ..+..+..|...+.++.+++ ..+++++.|+.|++||++.......+. ....+...+.+++|+ ++++++|+.|
T Consensus 308 ~~-~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~~--~~~l~s~~~d 381 (445)
T 2ovr_B 308 TG-NCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQ-GPNKHQSAVTCLQFN--KNFVITSSDD 381 (445)
T ss_dssp TC-CEEEEECCCCSCEEEEEEET--TEEEEEETTSCEEEEETTTCCEEEEEC-STTSCSSCEEEEEEC--SSEEEEEETT
T ss_pred CC-CEEEEEcCCcccEEEEEEeC--CEEEEEeCCCeEEEEECCCCcEEEEEc-cCCCCCCCEEEEEEC--CCEEEEEeCC
Confidence 74 45677888999999998864 578999999999999997543221111 111255679999995 5799999999
Q ss_pred CcEEEEEcCCCceEEEe-----cccccceeEEEEeCCCCEEEEEeCCCc----EEEEeCCC
Q 016769 329 RRVRIYNYRKGSALAIL-----KYHHATCNAVSFSSDCKLMASASEDST----VALWELYP 380 (383)
Q Consensus 329 g~i~iwd~~~~~~~~~~-----~~h~~~v~~v~~spd~~~las~s~d~~----i~~w~~~~ 380 (383)
|+|++||+.+++.+..+ .+|...|.+++|+|++.+||+|+.||+ |.+||+..
T Consensus 382 g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 382 GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 99999999999988877 578899999999999999999999998 99999974
No 51
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-32 Score=265.66 Aligned_cols=296 Identities=10% Similarity=0.045 Sum_probs=192.2
Q ss_pred eeeeecCCceeeEEEeCC------CCeEEEecCCCeEEEeeCcccccc-----------cccccccccceeeeeeecCCC
Q 016769 12 AVLRGHRASVTDVCFHQT------KPILFAGTTGGELRIWDTVQHRTV-----------SSSWVHSAAHGIVSVATGPSI 74 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~------~~~L~sgs~D~~v~vW~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 74 (383)
.++.+|.+.|++|+|+|+ +.+|||||.||+|+|||+..+.+. ..+..| ...+.+++|.+
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h--~~~v~sv~~s~-- 276 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLA--DSLITTFDFLS-- 276 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCT--TTCEEEEEESS--
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcC--CCCEEEEEecC--
Confidence 457889999999999997 579999999999999999765422 112222 24578888886
Q ss_pred CcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccc
Q 016769 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKE 154 (383)
Q Consensus 75 ~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (383)
+..|++|+.|++|++||++++.. +...+..+...
T Consensus 277 -~~~lasgs~DgtV~lWD~~~~~~---~~~~~~~H~~~------------------------------------------ 310 (524)
T 2j04_B 277 -PTTVVCGFKNGFVAEFDLTDPEV---PSFYDQVHDSY------------------------------------------ 310 (524)
T ss_dssp -SSEEEEEETTSEEEEEETTBCSS---CSEEEECSSSC------------------------------------------
T ss_pred -CCeEEEEeCCCEEEEEECCCCCC---ceEEeeccccc------------------------------------------
Confidence 25799999999999999986532 11111100000
Q ss_pred cCCcccee-cccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEE
Q 016769 155 SNRSFEII-DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNV 233 (383)
Q Consensus 155 ~~~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (383)
+..+ ..+++++.. ++++++.|++|+|||+++++++..+..+.. .....++ .|.|.. ..+
T Consensus 311 ----V~sv~~~~s~~g~~-~laS~S~D~tvklWD~~~~~~~~~~~~~~~--------~~~v~~v---~fsp~~----~~l 370 (524)
T 2j04_B 311 ----ILSVSTAYSDFEDT-VVSTVAVDGYFYIFNPKDIATTKTTVSRFR--------GSNLVPV---VYCPQI----YSY 370 (524)
T ss_dssp ----EEEEEEECCTTSCC-EEEEEETTSEEEEECGGGHHHHCEEEEECS--------CCSCCCE---EEETTT----TEE
T ss_pred ----EEEEEEEcCCCCCe-EEEEeccCCeEEEEECCCCCcccccccccc--------cCcccce---EeCCCc----CeE
Confidence 0000 012233322 456677899999999998776554432110 0111122 255532 247
Q ss_pred EEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec-CCCCeEE
Q 016769 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL-ERPGISG 312 (383)
Q Consensus 234 ~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~-~~~~i~~ 312 (383)
++++.|++|++||+++.. .+..+.+|..+|.+++|+|++..+++|+.|++|++||+....... ....... ....+..
T Consensus 371 ~s~~~d~tv~lwd~~~~~-~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~-~~~~~~~~~~~~v~~ 448 (524)
T 2j04_B 371 IYSDGASSLRAVPSRAAF-AVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHG-IKNSSATQKSLRLWK 448 (524)
T ss_dssp EEECSSSEEEEEETTCTT-CCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTC-C------CCCCEEEE
T ss_pred EEeCCCCcEEEEECcccc-cceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccc-cccCccceeeeEEEE
Confidence 889999999999999754 456678899999999999999999999999999999975321100 0000000 1124678
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcC-CCceEEEecccccceeEEEEeCCCC---EEEEEeCCCcEEEEeCCCCC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYR-KGSALAILKYHHATCNAVSFSSDCK---LMASASEDSTVALWELYPPH 382 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~v~~spd~~---~las~s~d~~i~~w~~~~~~ 382 (383)
++|+|+++.+. . +| .+++|+.. ++..+..+.+|...|.+|+|+|+++ ++|+|+.||+|+||++.-.|
T Consensus 449 v~~sp~g~~~~-~-~~-~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 449 WDYSIKDDKYR-I-DS-SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp CBCCSSSCEEE-E-CC-CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred eccCCCCCeEE-c-cC-CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 89999998553 2 22 33444442 4666778889999999999999965 99999999999999996443
No 52
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.8e-31 Score=244.50 Aligned_cols=253 Identities=14% Similarity=0.193 Sum_probs=179.4
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccccccccc--ccccceeeeeeecCCCCcceeEecccCCeEEE
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV--HSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~ 90 (383)
....|...|++++|+|++ .|++|+.||+|+|||+.+++++..... +.+...+.+++|++ ++++|++++.|++|++
T Consensus 77 ~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp--dg~~l~sgs~d~~i~i 153 (344)
T 4gqb_B 77 AGVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS--SGTQAVSGSKDICIKV 153 (344)
T ss_dssp EEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT--TSSEEEEEETTSCEEE
T ss_pred eeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC--CCCEEEEEeCCCeEEE
Confidence 445678899999999995 788999999999999988776543321 12234688999998 4789999999999999
Q ss_pred eecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCC
Q 016769 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGP 170 (383)
Q Consensus 91 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (383)
||+++++... .+..+.. . .....+.+++.
T Consensus 154 wd~~~~~~~~----~~~~h~~----------------------~-------------------------V~~~~~~~~~~ 182 (344)
T 4gqb_B 154 WDLAQQVVLS----SYRAHAA----------------------Q-------------------------VTCVAASPHKD 182 (344)
T ss_dssp EETTTTEEEE----EECCCSS----------------------C-------------------------EEEEEECSSCT
T ss_pred EECCCCcEEE----EEcCcCC----------------------c-------------------------eEEEEecCCCC
Confidence 9998764211 1100000 0 00011233443
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCC
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 250 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~ 250 (383)
. ++++++.|++|++||+++++....+.... ......++ .+.|.+ ...+++|+.||+|++||+++.
T Consensus 183 ~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~--------~~~~~~~~---~~~p~~---~~~l~sg~~dg~v~~wd~~~~ 247 (344)
T 4gqb_B 183 S-VFLSCSEDNRILLWDTRCPKPASQIGCSA--------PGYLPTSL---AWHPQQ---SEVFVFGDENGTVSLVDTKST 247 (344)
T ss_dssp T-EEEEEETTSCEEEEETTSSSCEEECC------------CCCEEEE---EECSSC---TTEEEEEETTSEEEEEESCC-
T ss_pred C-ceeeeccccccccccccccceeeeeecce--------eeccceee---eecCCC---CcceEEeccCCcEEEEECCCC
Confidence 3 44566778999999999998776664211 11111121 344432 235788999999999999974
Q ss_pred CCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCc-EEEEEeCC
Q 016769 251 GIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK-IAATAGWD 328 (383)
Q Consensus 251 ~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~s~~~d 328 (383)
.++..+++|..+|.++.|++++. .+++|+.|++|++||++... . + ....|...|++++|+|+++ +|++++.|
T Consensus 248 -~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~--~-~--~~~~H~~~V~~v~~sp~~~~llas~s~D 321 (344)
T 4gqb_B 248 -SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE--L-F--RSQAHRDFVRDATWSPLNHSLLTTVGWD 321 (344)
T ss_dssp --CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE--E-E--EECCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred -cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc--E-E--EEcCCCCCEEEEEEeCCCCeEEEEEcCC
Confidence 45778899999999999999874 67899999999999987532 2 1 2456778899999999986 67799999
Q ss_pred CcEEEEEcCCCc
Q 016769 329 RRVRIYNYRKGS 340 (383)
Q Consensus 329 g~i~iwd~~~~~ 340 (383)
++|++|++.+..
T Consensus 322 ~~v~~w~v~~~~ 333 (344)
T 4gqb_B 322 HQVVHHVVPTEP 333 (344)
T ss_dssp SCEEEEECCC--
T ss_pred CeEEEEECCCCC
Confidence 999999997643
No 53
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.4e-32 Score=246.86 Aligned_cols=287 Identities=10% Similarity=0.082 Sum_probs=205.1
Q ss_pred eeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccc---ccccccccccceeeeeeecCCCCcc-eeEecccCCe
Q 016769 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT---VSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDGT 87 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~D~t 87 (383)
....+|.+.|++++|+|++++|++|+.|+.|++|++.+++. +.....| ...+.++++.+ ++. .|++++.|++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~--~~~v~~~~~~~--~~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY--KHPLLCCNFID--NTDLQIYVGTVQGE 80 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC--SSCEEEEEEEE--SSSEEEEEEETTSC
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeec--CCceEEEEECC--CCCcEEEEEcCCCe
Confidence 34569999999999999999999999999999999876651 2222223 34678888887 367 8999999999
Q ss_pred EEEeec-CCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 88 VKCWDI-ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 88 i~~Wd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
|++||+ +++.. ..+... .| ...+ . ...+.
T Consensus 81 i~~wd~~~~~~~-----~~~~~~-~~-------------------~~~v------------------------~-~l~~~ 110 (342)
T 1yfq_A 81 ILKVDLIGSPSF-----QALTNN-EA-------------------NLGI------------------------C-RICKY 110 (342)
T ss_dssp EEEECSSSSSSE-----EECBSC-CC-------------------CSCE------------------------E-EEEEE
T ss_pred EEEEEeccCCce-----Eecccc-CC-------------------CCce------------------------E-EEEeC
Confidence 999999 76531 000000 00 0000 0 00112
Q ss_pred CCCCceeeeccCCcceEEEEecCC---------CCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEe
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNT---------AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY 237 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~---------~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~ 237 (383)
+ + .++ ++++.++.|++||+++ .+.+..+. ......++. +.+. .+++++
T Consensus 111 ~-~-~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-----------~~~~v~~~~---~~~~------~l~~~~ 167 (342)
T 1yfq_A 111 G-D-DKL-IAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-----------VKNKIFTMD---TNSS------RLIVGM 167 (342)
T ss_dssp T-T-TEE-EEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-----------SCCCEEEEE---ECSS------EEEEEE
T ss_pred C-C-CEE-EEEcCCCeEEEEcccccccccccccCCeeeEEe-----------eCCceEEEE---ecCC------cEEEEe
Confidence 2 2 233 4456789999999976 44332221 122233322 3332 288899
Q ss_pred CCCcEEEEeCCC-CCCc-eeeeeccccCeEEEEEeC-CCCceEEEEcCCcEEEEEccCC------CCeeEEeeeee----
Q 016769 238 EDGSILVWDIRN-PGIP-LTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHS------TGSCVIKKEIN---- 304 (383)
Q Consensus 238 ~dg~i~~wdl~~-~~~~-~~~~~~h~~~v~~~~~~~-~~~~~~s~~~d~~i~~wdl~~~------~~~~~~~~~~~---- 304 (383)
.|+.|++||+++ .... ......|..++.++.+++ ++..+++++.|+.|++|+++.. .....+.....
T Consensus 168 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (342)
T 1yfq_A 168 NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKD 247 (342)
T ss_dssp STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTC
T ss_pred CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccc
Confidence 999999999987 4432 233446778999999999 9999999999999999999865 22222211100
Q ss_pred -cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccc-ccceeEEEEeCCCCEEEEEeCCCc-EEEEe
Q 016769 305 -LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH-HATCNAVSFSSDCKLMASASEDST-VALWE 377 (383)
Q Consensus 305 -~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~v~~spd~~~las~s~d~~-i~~w~ 377 (383)
.+...+.+++|+|++++|++++.||+|++||+.+++.+..+.+| ...|.+++ |++++|++|+.|++ .+.|.
T Consensus 248 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 248 TNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp CSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred cccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 01238999999999999999999999999999999999999998 99999999 99999999999999 44433
No 54
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.7e-31 Score=248.44 Aligned_cols=296 Identities=14% Similarity=0.184 Sum_probs=208.4
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEee
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd 92 (383)
.+.+| ..+...+|+|++++|++|+.|+.|++||+.+++....+..|. ..+.++++++ ++..|++++.|++|++||
T Consensus 93 ~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~s~s~d~~i~iwd 167 (420)
T 3vl1_A 93 MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV--SEITKLKFFP--SGEALISSSQDMQLKIWS 167 (420)
T ss_dssp TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSS--SCEEEEEECT--TSSEEEEEETTSEEEEEE
T ss_pred EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccccc--CccEEEEECC--CCCEEEEEeCCCeEEEEe
Confidence 34455 445555789999999999999999999998776655443443 4688999998 467899999999999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
+++++... .+..+... + ....+.+++. +
T Consensus 168 ~~~~~~~~----~~~~h~~~----------------------v-------------------------~~~~~~~~~~-~ 195 (420)
T 3vl1_A 168 VKDGSNPR----TLIGHRAT----------------------V-------------------------TDIAIIDRGR-N 195 (420)
T ss_dssp TTTCCCCE----EEECCSSC----------------------E-------------------------EEEEEETTTT-E
T ss_pred CCCCcCce----EEcCCCCc----------------------E-------------------------EEEEEcCCCC-E
Confidence 98764211 11100000 0 0011223333 3
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEE------------------eecCCCCCCceEEE
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQ------------------AYLPSKSQGFVNVL 234 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~ 234 (383)
+ ++++.|++|++||+++++.+..+..... +.....++.+. .|.| ....++
T Consensus 196 l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~----~~~~l~ 263 (420)
T 3vl1_A 196 V-LSASLDGTIRLWECGTGTTIHTFNRKEN-------PHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT----YGKYVI 263 (420)
T ss_dssp E-EEEETTSCEEEEETTTTEEEEEECBTTB-------TTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC----TTEEEE
T ss_pred E-EEEcCCCcEEEeECCCCceeEEeecCCC-------CCCCccEEEEecCCcceeeecccCcccceEEcC----CCCEEE
Confidence 3 4566789999999999987777653210 00111111110 1222 234688
Q ss_pred EEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeec-CCCCeEE
Q 016769 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINL-ERPGISG 312 (383)
Q Consensus 235 sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~-~~~~i~~ 312 (383)
+|+.||.|++||+++..........|..+|.++.|++++. .+++++.|+.|++||++...... ..+.. +...+.+
T Consensus 264 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~---~~~~~~~~~~v~~ 340 (420)
T 3vl1_A 264 AGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPV---GEFLINEGTPINN 340 (420)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCS---EEEEESTTSCEEE
T ss_pred EEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCch---hhhhccCCCCceE
Confidence 9999999999999986554444556888999999999988 88999999999999998654311 11222 4456777
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCCC---------ceEEEecccccceeEEEEeCCCC---EEEEEeCCCcEEEEeCCC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRKG---------SALAILKYHHATCNAVSFSSDCK---LMASASEDSTVALWELYP 380 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~h~~~v~~v~~spd~~---~las~s~d~~i~~w~~~~ 380 (383)
+.+ |++++|++++.|++|++||+..+ .....+.+|...|.+++|+||++ .|++++.+|.+.+|++.+
T Consensus 341 ~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 341 VYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 755 57889999999999999999763 22234567889999999999999 788888899999999986
Q ss_pred C
Q 016769 381 P 381 (383)
Q Consensus 381 ~ 381 (383)
|
T Consensus 420 ~ 420 (420)
T 3vl1_A 420 P 420 (420)
T ss_dssp -
T ss_pred C
Confidence 6
No 55
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=5.2e-31 Score=249.24 Aligned_cols=282 Identities=16% Similarity=0.316 Sum_probs=204.2
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
.......+|...|++++| ++++|++|+.||.|++||..+++....+..|. ..+.++.+. ++.+++|+.|++|
T Consensus 124 ~~~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~--~~v~~l~~~----~~~l~sg~~dg~i 195 (435)
T 1p22_A 124 QRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHT--GSVLCLQYD----ERVIITGSSDSTV 195 (435)
T ss_dssp CCEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCS--SCEEEEECC----SSEEEEEETTSCE
T ss_pred eEEecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCC--CcEEEEEEC----CCEEEEEcCCCeE
Confidence 334445577888998877 88999999999999999998887776655554 356777762 5789999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||+++++.. ..+..+ . .. +..+...
T Consensus 196 ~vwd~~~~~~~----~~~~~h-------------~---------~~---------------------------v~~l~~~ 222 (435)
T 1p22_A 196 RVWDVNTGEML----NTLIHH-------------C---------EA---------------------------VLHLRFN 222 (435)
T ss_dssp EEEESSSCCEE----EEECCC-------------C---------SC---------------------------EEEEECC
T ss_pred EEEECCCCcEE----EEEcCC-------------C---------Cc---------------------------EEEEEEc
Confidence 99999876421 010000 0 00 0000011
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
+ . .+++++.|+.|++||++++......... ..+...+.++. + + ...+++|+.||.|++||++
T Consensus 223 ~-~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~-------~~~~~~v~~~~---~--~----~~~l~s~~~dg~i~vwd~~ 284 (435)
T 1p22_A 223 N-G-MMVTCSKDRSIAVWDMASPTDITLRRVL-------VGHRAAVNVVD---F--D----DKYIVSASGDRTIKVWNTS 284 (435)
T ss_dssp T-T-EEEEEETTSCEEEEECSSSSCCEEEEEE-------CCCSSCEEEEE---E--E----TTEEEEEETTSEEEEEETT
T ss_pred C-C-EEEEeeCCCcEEEEeCCCCCCceeeeEe-------cCCCCcEEEEE---e--C----CCEEEEEeCCCeEEEEECC
Confidence 1 2 3455667899999999887754211100 01112222222 2 1 1268899999999999998
Q ss_pred CCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC
Q 016769 249 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD 328 (383)
Q Consensus 249 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d 328 (383)
+. ..+..+..|..+|.++.+++ ..+++|+.|+.|++||++... .. ..+..+...+.+++| ++++|++|+.|
T Consensus 285 ~~-~~~~~~~~~~~~v~~~~~~~--~~l~~g~~dg~i~iwd~~~~~--~~--~~~~~h~~~v~~~~~--~~~~l~sg~~d 355 (435)
T 1p22_A 285 TC-EFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGA--CL--RVLEGHEELVRCIRF--DNKRIVSGAYD 355 (435)
T ss_dssp TC-CEEEEEECCSSCEEEEEEET--TEEEEEETTSCEEEEETTTCC--EE--EEECCCSSCEEEEEC--CSSEEEEEETT
T ss_pred cC-cEEEEEcCCCCcEEEEEeCC--CEEEEEeCCCeEEEEECCCCC--EE--EEEeCCcCcEEEEEe--cCCEEEEEeCC
Confidence 74 45778889999999999964 678999999999999997543 22 234456678999998 78899999999
Q ss_pred CcEEEEEcCCCc---------eEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 329 RRVRIYNYRKGS---------ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 329 g~i~iwd~~~~~---------~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
|+|++||+.+++ .+..+.+|...|.+++| ++++|++|+.||.|++||+..
T Consensus 356 g~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 356 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp SCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---
T ss_pred CcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCC
Confidence 999999997665 78889999999999999 788999999999999999853
No 56
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=274.89 Aligned_cols=353 Identities=11% Similarity=0.101 Sum_probs=210.1
Q ss_pred eecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecC
Q 016769 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (383)
Q Consensus 15 ~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~ 94 (383)
.+|...|++|+|+| +++|+|++.|++|+|||+.+++++..+. | ...+.+++++| +++++++|+.|++|++||++
T Consensus 55 ~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~--~~~V~~v~~sp--~g~~l~sgs~dg~V~lwd~~ 128 (902)
T 2oaj_A 55 LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-V--PGKITSIDTDA--SLDWMLIGLQNGSMIVYDID 128 (902)
T ss_dssp CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-C--SSCEEEEECCT--TCSEEEEEETTSCEEEEETT
T ss_pred cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-C--CCCEEEEEECC--CCCEEEEEcCCCcEEEEECC
Confidence 46889999999999 8899999999999999998877765543 2 24588899998 46899999999999999998
Q ss_pred CCCCCCCCeeee----------ecCceeeeeEEeecc--ccccccccCCCCccceeccCcccccCcccc-----c-----
Q 016769 95 NGGLSSNPSLTI----------KTNSYHFCKLSLVKE--PYANAKQANEPKDCYEREVGETVDTDSLCD-----S----- 152 (383)
Q Consensus 95 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----- 152 (383)
++... ...+ ..+............ .........+.. .|+...+.... ....+ .
T Consensus 129 ~~~~~---~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~-~~~~~~~~g~~~~~~~ 203 (902)
T 2oaj_A 129 RDQLS---SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQ-SFIYELPPFAPGGDFS 203 (902)
T ss_dssp TTEEE---EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEE-EECCCBCTTCCCSTTC
T ss_pred CCccc---cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEE-EEecccCCcCCCcccc
Confidence 76421 0000 000000001111100 000000111111 22222111000 00000 0
Q ss_pred --cccC-CccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeE--ecc---Cc--------------CCCCCCc--
Q 016769 153 --KESN-RSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR--LHQ---NS--------------CGGSPNF-- 208 (383)
Q Consensus 153 --~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~--~~~---~~--------------~~~s~~~-- 208 (383)
.... ........+++++. ++++++.|++|++||+++++++.. +.. +. .+.++.+
T Consensus 204 ~~~~~~h~~~V~~v~fspdg~--~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~ 281 (902)
T 2oaj_A 204 EKTNEKRTPKVIQSLYHPNSL--HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMC 281 (902)
T ss_dssp CCTTSCBCCCEEEEEECTTSS--EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEE
T ss_pred cccccccCCCeEEEEEcCCCC--EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEe
Confidence 0000 01112233456654 345567789999999998876542 210 00 0000011
Q ss_pred --CCCC-CceeeE------------E---------------------------Ee-------------ecCC------CC
Q 016769 209 --SSKG-RGMCMA------------V---------------------------QA-------------YLPS------KS 227 (383)
Q Consensus 209 --~~~~-~~~~~~------------~---------------------------~~-------------~~~~------~~ 227 (383)
.+.+ ..+..+ + .. +.+. ..
T Consensus 282 ~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~ 361 (902)
T 2oaj_A 282 ENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGC 361 (902)
T ss_dssp CSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHT
T ss_pred cCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCC
Confidence 0000 000000 0 00 0000 00
Q ss_pred CCceEEEEEeCCCcEEEEeCCCCCCcee------ee----------------------------------eccccCeEEE
Q 016769 228 QGFVNVLAGYEDGSILVWDIRNPGIPLT------AM----------------------------------KVHLEPVLCL 267 (383)
Q Consensus 228 ~~~~~~~sg~~dg~i~~wdl~~~~~~~~------~~----------------------------------~~h~~~v~~~ 267 (383)
.+...+++++.|++|++||+.++..... .+ ++|...+..+
T Consensus 362 ~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv 441 (902)
T 2oaj_A 362 HNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQK 441 (902)
T ss_dssp BSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCC
T ss_pred CCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcc
Confidence 1122567788899999999865321111 12 2233333444
Q ss_pred EEeCCCCceEEEEcCCcEEEEEccCCCCe--eEEeeeee-----cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCc
Q 016769 268 SIDESCNGGISGGADQKIVLYNLDHSTGS--CVIKKEIN-----LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS 340 (383)
Q Consensus 268 ~~~~~~~~~~s~~~d~~i~~wdl~~~~~~--~~~~~~~~-----~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~ 340 (383)
+|++++..+++|+.|++|++||+...... ..+...+. .+...|.+++|+||+++||+|+.||+|+|||+.+++
T Consensus 442 ~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~ 521 (902)
T 2oaj_A 442 LPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQ 521 (902)
T ss_dssp CCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECC
T ss_pred cccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCcc
Confidence 45667778999999999999999764311 01111111 456789999999999999999999999999997652
Q ss_pred ---------------------------------------------eEEEecccccceeEEEEeCCCCEEEEEeCCCcEEE
Q 016769 341 ---------------------------------------------ALAILKYHHATCNAVSFSSDCKLMASASEDSTVAL 375 (383)
Q Consensus 341 ---------------------------------------------~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~ 375 (383)
++..+.+|.+.|.+++||||| +||+|+.|++|+|
T Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~l 600 (902)
T 2oaj_A 522 FYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLML 600 (902)
T ss_dssp C---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEE
T ss_pred ccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEE
Confidence 366788899999999999999 9999999999999
Q ss_pred EeCCCC
Q 016769 376 WELYPP 381 (383)
Q Consensus 376 w~~~~~ 381 (383)
||+..+
T Consensus 601 wd~~~~ 606 (902)
T 2oaj_A 601 IDRRGP 606 (902)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 998654
No 57
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8e-31 Score=238.01 Aligned_cols=248 Identities=19% Similarity=0.303 Sum_probs=187.2
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEE
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~ 90 (383)
...+.||...|++++|++++.+|+||+.|++|++||+.+++++..+..+. ..+.+++++| ++..|++++.|+++++
T Consensus 73 ~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~--~~~~~~~~sp--dg~~l~~g~~dg~v~i 148 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGP--VDAWTLAFSP--DSQYLATGTHVGKVNI 148 (321)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCT--TCCCCEEECT--TSSEEEEECTTSEEEE
T ss_pred eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCC--ccEEEEEECC--CCCEEEEEcCCCcEEE
Confidence 34688999999999999999999999999999999998887766544332 3466788888 4689999999999999
Q ss_pred eecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCC
Q 016769 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGP 170 (383)
Q Consensus 91 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (383)
|+++++.. ...+... . . ......+.++++
T Consensus 149 ~~~~~~~~----~~~~~~~------------~----------~-------------------------~v~~~~~spdg~ 177 (321)
T 3ow8_A 149 FGVESGKK----EYSLDTR------------G----------K-------------------------FILSIAYSPDGK 177 (321)
T ss_dssp EETTTCSE----EEEEECS------------S----------S-------------------------CEEEEEECTTSS
T ss_pred EEcCCCce----eEEecCC------------C----------c-------------------------eEEEEEECCCCC
Confidence 99987631 1110000 0 0 000112334443
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCC
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 250 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~ 250 (383)
++ ++|+.|+.|++||+++++.+..+..+. ..+.++ .|.|+. ..+++|+.|++|++||+++.
T Consensus 178 -~l-asg~~dg~i~iwd~~~~~~~~~~~~h~----------~~v~~l---~~spd~----~~l~s~s~dg~i~iwd~~~~ 238 (321)
T 3ow8_A 178 -YL-ASGAIDGIINIFDIATGKLLHTLEGHA----------MPIRSL---TFSPDS----QLLVTASDDGYIKIYDVQHA 238 (321)
T ss_dssp -EE-EEEETTSCEEEEETTTTEEEEEECCCS----------SCCCEE---EECTTS----CEEEEECTTSCEEEEETTTC
T ss_pred -EE-EEEcCCCeEEEEECCCCcEEEEEcccC----------CceeEE---EEcCCC----CEEEEEcCCCeEEEEECCCc
Confidence 34 456678999999999998777665321 112222 244432 36889999999999999874
Q ss_pred CCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCc
Q 016769 251 GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRR 330 (383)
Q Consensus 251 ~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~ 330 (383)
.....+.+|..+|.+++|++++..+++++.|++|++||+.... +. ..+..+...|.+++|+|++++|++++.|++
T Consensus 239 -~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~--~~--~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~ 313 (321)
T 3ow8_A 239 -NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT--CV--HTFFDHQDQVWGVKYNGNGSKIVSVGDDQE 313 (321)
T ss_dssp -CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EE--EEECCCSSCEEEEEECTTSSEEEEEETTCC
T ss_pred -ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE--EE--EEEcCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 4567788999999999999999999999999999999997543 22 234456678999999999999999999999
Q ss_pred EEEEEcC
Q 016769 331 VRIYNYR 337 (383)
Q Consensus 331 i~iwd~~ 337 (383)
|++||+.
T Consensus 314 i~vwd~p 320 (321)
T 3ow8_A 314 IHIYDCP 320 (321)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 9999974
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.1e-31 Score=250.13 Aligned_cols=283 Identities=12% Similarity=0.111 Sum_probs=198.4
Q ss_pred CceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCC
Q 016769 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (383)
Q Consensus 19 ~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~ 98 (383)
..+++++|+|++++|++|+.|+.|++||..+.+....+..+ .......+.+ +++.|++++.|++|++||++++..
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~---~~~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~ 131 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA---DYTAVDTAKL--QMRRFILGTTEGDIKVLDSNFNLQ 131 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC---CEEEEEEECS--SSCEEEEEETTSCEEEECTTSCEE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC---CceEEEEEec--CCCEEEEEECCCCEEEEeCCCcce
Confidence 34568999999999999999999999999877665544332 2233335565 468899999999999999876531
Q ss_pred CCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccC
Q 016769 99 SSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGE 178 (383)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 178 (383)
.. . .... ... .....+.+++. + +++++
T Consensus 132 ~~-------~----------~~~h---------~~~-------------------------v~~~~~~~~~~-~-l~s~s 158 (420)
T 3vl1_A 132 RE-------I----------DQAH---------VSE-------------------------ITKLKFFPSGE-A-LISSS 158 (420)
T ss_dssp EE-------E----------TTSS---------SSC-------------------------EEEEEECTTSS-E-EEEEE
T ss_pred ee-------e----------cccc---------cCc-------------------------cEEEEECCCCC-E-EEEEe
Confidence 00 0 0000 000 00011233443 3 44566
Q ss_pred CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeee
Q 016769 179 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK 258 (383)
Q Consensus 179 ~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~ 258 (383)
.|+.|++||+++++.+..+..+ ...+.++ .+.|+. ..+++++.|++|++||+++. ..+..+.
T Consensus 159 ~d~~i~iwd~~~~~~~~~~~~h----------~~~v~~~---~~~~~~----~~l~s~~~d~~v~iwd~~~~-~~~~~~~ 220 (420)
T 3vl1_A 159 QDMQLKIWSVKDGSNPRTLIGH----------RATVTDI---AIIDRG----RNVLSASLDGTIRLWECGTG-TTIHTFN 220 (420)
T ss_dssp TTSEEEEEETTTCCCCEEEECC----------SSCEEEE---EEETTT----TEEEEEETTSCEEEEETTTT-EEEEEEC
T ss_pred CCCeEEEEeCCCCcCceEEcCC----------CCcEEEE---EEcCCC----CEEEEEcCCCcEEEeECCCC-ceeEEee
Confidence 7899999999998877666421 1222332 244432 25889999999999999874 3445554
Q ss_pred c---cccCeEEE---------------------EEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEE
Q 016769 259 V---HLEPVLCL---------------------SIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 259 ~---h~~~v~~~---------------------~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~ 314 (383)
. |...+.++ .|++++..+++++.|+.|++||+....... .....+...+.+++
T Consensus 221 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~v~~~~ 297 (420)
T 3vl1_A 221 RKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTI---QLPSKFTCSCNSLT 297 (420)
T ss_dssp BTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEE---EECCTTSSCEEEEE
T ss_pred cCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeE---EcccccCCCceeEE
Confidence 3 33444444 446778889999999999999997543221 12233556899999
Q ss_pred ECCCCc-EEEEEeCCCcEEEEEcCCCce-EEEecc-cccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 315 IRPDSK-IAATAGWDRRVRIYNYRKGSA-LAILKY-HHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 315 ~~p~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~~-h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
|+|+++ +|++++.||+|++||+++++. +..+.+ |...|.++.| |++++|++++.|+.|++|++..+
T Consensus 298 ~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 298 VDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred EeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence 999998 999999999999999998754 666766 6667888755 57889999999999999998753
No 59
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.7e-31 Score=261.13 Aligned_cols=344 Identities=16% Similarity=0.180 Sum_probs=215.9
Q ss_pred CCCeeeeeecCC---ceeeEEEeCC-CCeEEEecCCCeEEEeeCccccccccc-c---cccccceeeeeeecCCCCccee
Q 016769 8 PDPVAVLRGHRA---SVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSS-W---VHSAAHGIVSVATGPSIGLNKV 79 (383)
Q Consensus 8 ~~~~~~l~gH~~---~V~~v~f~~~-~~~L~sgs~D~~v~vW~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~l 79 (383)
.+++..+.+|.+ .|++++|+|+ +++|++|+.|+.|++||+.+++.+..+ . .| ...+.++.+. ++..|
T Consensus 193 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~~v~~~~~~---~~~~l 267 (615)
T 1pgu_A 193 FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV--QGGIFALSWL---DSQKF 267 (615)
T ss_dssp BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCC--CSCEEEEEES---SSSEE
T ss_pred cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccccccc--CCceEEEEEc---CCCEE
Confidence 345678889999 9999999999 999999999999999999887766654 2 23 2457777877 35889
Q ss_pred EecccCCeEEEeecCCCCCCCCCeeeeecC----ceeeeeEEeeccccccccccCCCCccceec----------------
Q 016769 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTN----SYHFCKLSLVKEPYANAKQANEPKDCYERE---------------- 139 (383)
Q Consensus 80 ~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 139 (383)
++++.|++|++||+++++... .+... .....................+....+...
T Consensus 268 ~~~~~d~~i~~wd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~ 343 (615)
T 1pgu_A 268 ATVGADATIRVWDVTTSKCVQ----KWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGIT 343 (615)
T ss_dssp EEEETTSEEEEEETTTTEEEE----EEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEE
T ss_pred EEEcCCCcEEEEECCCCcEEE----EEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEE
Confidence 999999999999998764311 11111 000000000000000000000000000000
Q ss_pred ---c---------CcccccCccccccccCCccce-ecccCCCCCceeeeccCCcceEEEEecCCCCeee---Eec--cCc
Q 016769 140 ---V---------GETVDTDSLCDSKESNRSFEI-IDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT---RLH--QNS 201 (383)
Q Consensus 140 ---~---------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~---~~~--~~~ 201 (383)
+ +....+... ... ......+ ...+ +++. .+ ++++.++.+++||+++++... .+. .+.
T Consensus 344 ~~~~~~l~~~~~dg~i~~w~~~-~~~-~~~~~~v~~~~~-~~~~-~l-~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~ 418 (615)
T 1pgu_A 344 ALTVNPLISGSYDGRIMEWSSS-SMH-QDHSNLIVSLDN-SKAQ-EY-SSISWDDTLKVNGITKHEFGSQPKVASANNDG 418 (615)
T ss_dssp EEETTTTEEEETTSCEEETTTT-EEE-CCCCSCEEEEEC-CSTT-CC-EEEETTTEEEETTEEEEECSSCEEEEEECSSS
T ss_pred EEEecCcEEECCCCeEEEEEch-hhc-CcccCceEEEEE-CCCc-EE-EEEeCCCCEEEEEcccCcccCCceEEEEcCCC
Confidence 0 000000000 000 0000000 0111 2222 23 344567788888876533100 000 000
Q ss_pred C----------------CCCC--CcCCCCCceeeEEEeecCCCCCCceEEEEEeC-CCcEEEEeCCCCCCceeeeecccc
Q 016769 202 C----------------GGSP--NFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE-DGSILVWDIRNPGIPLTAMKVHLE 262 (383)
Q Consensus 202 ~----------------~~s~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~-dg~i~~wdl~~~~~~~~~~~~h~~ 262 (383)
. .... .+.......++ .+. ...+++++. |+.|++||+.+.......+..|..
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~ 489 (615)
T 1pgu_A 419 FTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAV---SLS------QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRA 489 (615)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSCEEEE---EEC------SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSS
T ss_pred CEEEEeCCCceEEEeccCCceeeecccCCCceEE---EEc------CCEEEEeecCCCeEEEEECCCccccccccCCccC
Confidence 0 0000 00000011111 111 125888999 999999999863221155677899
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec-CCCCeEEEEECC----------CCcEEEEEeCCCcE
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL-ERPGISGTSIRP----------DSKIAATAGWDRRV 331 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~-~~~~i~~~~~~p----------~~~~l~s~~~dg~i 331 (383)
+|.++.|++++..+++++.|+.|++||++... .. ..... +...+++++|+| ++++|++++.||+|
T Consensus 490 ~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~--~~--~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i 565 (615)
T 1pgu_A 490 KPSYISISPSETYIAAGDVMGKILLYDLQSRE--VK--TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 565 (615)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EE--ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCE
T ss_pred ceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc--ce--eEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcE
Confidence 99999999999999999999999999997542 22 22333 667899999999 99999999999999
Q ss_pred EEEEcCCC-ceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 332 RIYNYRKG-SALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 332 ~iwd~~~~-~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++||+.++ +.+..+.+|...|.+++|+||++ |++++.|+.|++|++.
T Consensus 566 ~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 566 FIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp EEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred EEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 99999998 78888999999999999999999 9999999999999985
No 60
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3e-31 Score=281.55 Aligned_cols=360 Identities=16% Similarity=0.214 Sum_probs=232.7
Q ss_pred CCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
.+.+.++.+|.+.|++++|+|++++|++|+.|++|+|||+.+++++..+..|. ..+.++.+.+..+...+++++.|++
T Consensus 647 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~sg~~d~~ 724 (1249)
T 3sfz_A 647 GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHS--EQVNCCHFTNKSNHLLLATGSNDFF 724 (1249)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS--SCEEEEEECSSSSCCEEEEEETTSC
T ss_pred CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCC--CcEEEEEEecCCCceEEEEEeCCCe
Confidence 35677899999999999999999999999999999999999888776665543 4678889988544567889999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccc-cCCCCccceeccC-------------------------
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ-ANEPKDCYEREVG------------------------- 141 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------------------------- 141 (383)
|++||++++.... .+..+........+.......+.. ..+....|+...+
T Consensus 725 v~vwd~~~~~~~~----~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1249)
T 3sfz_A 725 LKLWDLNQKECRN----TMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVI 800 (1249)
T ss_dssp EEEEETTSSSEEE----EECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCC
T ss_pred EEEEECCCcchhh----eecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccce
Confidence 9999998875321 111111000000000000000000 0000000100000
Q ss_pred -------------------cccccCccccc----cccCC-ccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEe
Q 016769 142 -------------------ETVDTDSLCDS----KESNR-SFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL 197 (383)
Q Consensus 142 -------------------~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~ 197 (383)
....+...... ..... .......+++++. + +++++.++.|++||+.++..+..+
T Consensus 801 v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~-l~~~~~dg~v~vwd~~~~~~~~~~ 878 (1249)
T 3sfz_A 801 VKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH-L-AVIALSQYCVELWNIDSRLKVADC 878 (1249)
T ss_dssp BCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT-E-EEEECSSSCEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC-E-EEEEeCCCeEEEEEcCCCceeeec
Confidence 00000000000 00000 0011112334443 3 445566899999999988876665
Q ss_pred ccCcC-CCCCCcCCCCCceeeE----------------------------------------------------------
Q 016769 198 HQNSC-GGSPNFSSKGRGMCMA---------------------------------------------------------- 218 (383)
Q Consensus 198 ~~~~~-~~s~~~~~~~~~~~~~---------------------------------------------------------- 218 (383)
..+.. +.++.+++.+..+..+
T Consensus 879 ~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1249)
T 3sfz_A 879 RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDY 958 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEE
T ss_pred CCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEE
Confidence 53221 1112222222111100
Q ss_pred -------EEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEcc
Q 016769 219 -------VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291 (383)
Q Consensus 219 -------~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~ 291 (383)
...+.|. ...+++|+.||.|++||+.+. .....+..|..+|.++.|++++..+++++.|+.|++||+.
T Consensus 959 ~~~~~i~~~~~sp~----g~~l~~g~~~g~i~i~d~~~~-~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 959 LPEAQVSCCCLSPH----LEYVAFGDEDGAIKIIELPNN-RVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp ECCSCEEEEEECTT----SSEEEEEETTSCCEEEETTTT-SCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETT
T ss_pred cccCcEEEEEEcCC----CCEEEEEcCCCCEEEEEcCCC-ceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 0012221 225778888888999988764 4466778899999999999999999999999999999986
Q ss_pred CCCCee------------------E------------------EeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEE
Q 016769 292 HSTGSC------------------V------------------IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 335 (383)
Q Consensus 292 ~~~~~~------------------~------------------~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd 335 (383)
...... . ....+..+...+.+++|+|+++++++++.|++|++||
T Consensus 1034 ~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd 1113 (1249)
T 3sfz_A 1034 TGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWS 1113 (1249)
T ss_dssp TTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEEC
T ss_pred CCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 431100 0 0011233556788999999999999999999999999
Q ss_pred cCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 336 YRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 336 ~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+.+++.+..+.+|...|.+++|+|||++||+|+.||.|++||+..
T Consensus 1114 ~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~ 1158 (1249)
T 3sfz_A 1114 FDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSD 1158 (1249)
T ss_dssp SSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSS
T ss_pred CCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 999999989999999999999999999999999999999999864
No 61
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-31 Score=269.96 Aligned_cols=353 Identities=10% Similarity=0.067 Sum_probs=211.0
Q ss_pred eeeecCCceeeEEEeCC-CCeEEEecCCCeEEEeeCccccccccccccc----------------ccceeeeeeecCCCC
Q 016769 13 VLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHS----------------AAHGIVSVATGPSIG 75 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~-~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~ 75 (383)
.+++|.+.|++|+|+|+ +..|++|+.|+.| +||+.+++++..+..|. ....+.+++|+|+
T Consensus 146 ~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd-- 222 (902)
T 2oaj_A 146 FPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN-- 222 (902)
T ss_dssp CSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT--
T ss_pred ccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC--
Confidence 45789999999999996 5799999999999 99998876654443330 0135889999984
Q ss_pred cceeEecccCCeEEEeecCCCCCCCCCeeee-----e-------------cCceeeeeEEeecccc---ccccccCCC--
Q 016769 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLTI-----K-------------TNSYHFCKLSLVKEPY---ANAKQANEP-- 132 (383)
Q Consensus 76 ~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~-----~-------------~~~~~~~~~~~~~~~~---~~~~~~~~~-- 132 (383)
+..|++++.|++|++||+.+++.... ..+ + ........+.....+. ..+......
T Consensus 223 g~~lasgs~Dg~i~lWd~~~g~~~~~--r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~ 300 (902)
T 2oaj_A 223 SLHIITIHEDNSLVFWDANSGHMIMA--RTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRG 300 (902)
T ss_dssp SSEEEEEETTCCEEEEETTTCCEEEE--ECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTS
T ss_pred CCEEEEEECCCeEEEEECCCCcEEEE--EeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCC
Confidence 78999999999999999988753210 000 0 0000001111111110 000000000
Q ss_pred --CccceeccCcc--ccc-----------Ccccc-ccc--cCCc---cceecccCC-----CCCceeeeccCCcceEEEE
Q 016769 133 --KDCYEREVGET--VDT-----------DSLCD-SKE--SNRS---FEIIDDVPA-----EGPKYMAVAGEQLSEVEIW 186 (383)
Q Consensus 133 --~~~~~~~~~~~--~~~-----------~~~~~-~~~--~~~~---~~~~~~~~~-----~~~~~~~~~g~~~~~i~~W 186 (383)
........+.. ... ..... ... .... +.+....++ .++..+++ ++.++.|++|
T Consensus 301 ~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~-~s~dg~l~~~ 379 (902)
T 2oaj_A 301 DNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILL-ILGNGEIETM 379 (902)
T ss_dssp SCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEE-EETTSCEEEE
T ss_pred CCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEE-EcCCCcEEEE
Confidence 00000000000 000 00000 000 0000 000000001 11223443 3457899999
Q ss_pred ecCCCCeeeEeccCcCCCCCCcCCCCCceeeEE-------------------------------EeecCCCCCCceEEEE
Q 016769 187 DLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAV-------------------------------QAYLPSKSQGFVNVLA 235 (383)
Q Consensus 187 dl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~s 235 (383)
|+.++.......+.. ..... ....+.++++ ..|.| +...+++
T Consensus 380 ~~~~g~~~~~~~~~~--~~l~~-~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~sp----dg~~laS 452 (902)
T 2oaj_A 380 LYPSGIFTDKASLFP--QNLSW-LRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAE----YGTAFIT 452 (902)
T ss_dssp ETTTCCEECCGGGSC--GGGTT-BTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCS----EEEEEEE
T ss_pred ECCCCCcccccccCC--Ccccc-cCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccc----cCcEEEE
Confidence 997765332210000 00000 0000111110 01222 2346889
Q ss_pred EeCCCcEEEEeCCCCCCc-eeee----e-----ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCC----------
Q 016769 236 GYEDGSILVWDIRNPGIP-LTAM----K-----VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG---------- 295 (383)
Q Consensus 236 g~~dg~i~~wdl~~~~~~-~~~~----~-----~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~---------- 295 (383)
|+.|++|++||+..+... ...+ . +|...|.+++|+|++..+++|+.|++|++||++....
T Consensus 453 gs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~ 532 (902)
T 2oaj_A 453 GHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESG 532 (902)
T ss_dssp EETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC----------
T ss_pred ecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCc
Confidence 999999999999864211 0111 1 6888999999999999999999999999999975310
Q ss_pred e-------------------------------eEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEE-
Q 016769 296 S-------------------------------CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA- 343 (383)
Q Consensus 296 ~-------------------------------~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~- 343 (383)
. ......+..+...|++++|+||| +||+|+.|++|++||++.+..+.
T Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~ 611 (902)
T 2oaj_A 533 DLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYM 611 (902)
T ss_dssp -----CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEE
T ss_pred ccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEE
Confidence 0 00112344577889999999999 99999999999999998877653
Q ss_pred ----Eec-ccccceeEEEEe-----CCC---CEEEEEeCCCcEEEEeCC
Q 016769 344 ----ILK-YHHATCNAVSFS-----SDC---KLMASASEDSTVALWELY 379 (383)
Q Consensus 344 ----~~~-~h~~~v~~v~~s-----pd~---~~las~s~d~~i~~w~~~ 379 (383)
.+. +|...|.+|+|+ ||| ++|++|+.|++|++||+.
T Consensus 612 ~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~ 660 (902)
T 2oaj_A 612 ENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKIL 660 (902)
T ss_dssp EEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEE
T ss_pred eehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEe
Confidence 232 899999999999 886 799999999999999983
No 62
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.2e-30 Score=252.65 Aligned_cols=306 Identities=14% Similarity=0.201 Sum_probs=202.6
Q ss_pred CCeeeeeecCCceeeEEEeCCCC-eEEEecCCCeEEEeeCcccccccccccccc-cceeeeeeecCCCCcceeEecccCC
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVSVATGPSIGLNKVISQGRDG 86 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~-~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~D~ 86 (383)
+++..+.+|.+.|++++|+|+++ +|++++.|+.|++||..+.+.+..+..|.. ...+.++++.++ +++.|++++.|+
T Consensus 151 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg 229 (615)
T 1pgu_A 151 NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPD-SGEFVITVGSDR 229 (615)
T ss_dssp CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECST-TCCEEEEEETTC
T ss_pred CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCC-CCCEEEEEeCCC
Confidence 45677889999999999999998 899999999999999988777666554432 115788999883 168899999999
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
+|++||+++++... .+. .... .....+ ....+.
T Consensus 230 ~i~vwd~~~~~~~~----~~~------------~~~~------~~~~~v-------------------------~~~~~~ 262 (615)
T 1pgu_A 230 KISCFDGKSGEFLK----YIE------------DDQE------PVQGGI-------------------------FALSWL 262 (615)
T ss_dssp CEEEEETTTCCEEE----ECC------------BTTB------CCCSCE-------------------------EEEEES
T ss_pred eEEEEECCCCCEeE----Eec------------cccc------ccCCce-------------------------EEEEEc
Confidence 99999998764210 000 0000 000000 001122
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
++ +++ ++++.++.|++||+++++.+..+..... .......+.. + +. ...+++++.|+.|++||
T Consensus 263 -~~-~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~------~~~~~~~~~~---~-~~----~~~l~~~~~~g~i~~~d 325 (615)
T 1pgu_A 263 -DS-QKF-ATVGADATIRVWDVTTSKCVQKWTLDKQ------QLGNQQVGVV---A-TG----NGRIISLSLDGTLNFYE 325 (615)
T ss_dssp -SS-SEE-EEEETTSEEEEEETTTTEEEEEEECCTT------CGGGCEEEEE---E-EE----TTEEEEEETTSCEEEEE
T ss_pred -CC-CEE-EEEcCCCcEEEEECCCCcEEEEEcCCCC------cccCceeEEE---e-CC----CCeEEEEECCCCEEEEE
Confidence 22 334 4456679999999999887766653210 0000111111 1 11 12466777777777777
Q ss_pred CCCCCCceeeeeccccC---------------------------------eEEEEEeCCCCceEEEEcCCcEEEEEccCC
Q 016769 247 IRNPGIPLTAMKVHLEP---------------------------------VLCLSIDESCNGGISGGADQKIVLYNLDHS 293 (383)
Q Consensus 247 l~~~~~~~~~~~~h~~~---------------------------------v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~ 293 (383)
+++ ..++..+..|..+ |.++.+ +.+..+++++.|+.+++||+...
T Consensus 326 ~~~-~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~ 403 (615)
T 1pgu_A 326 LGH-DEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKH 403 (615)
T ss_dssp TTE-EEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEE
T ss_pred CCC-CcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccC
Confidence 764 2233344444433 344444 22344555555555555554321
Q ss_pred C--------------------------------------------------------------Cee--------EEe-ee
Q 016769 294 T--------------------------------------------------------------GSC--------VIK-KE 302 (383)
Q Consensus 294 ~--------------------------------------------------------------~~~--------~~~-~~ 302 (383)
. +.. ... ..
T Consensus 404 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~ 483 (615)
T 1pgu_A 404 EFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDL 483 (615)
T ss_dssp ECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEEC
T ss_pred cccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccc
Confidence 0 000 000 22
Q ss_pred eecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecc-cccceeEEEEeC----------CCCEEEEEeCCC
Q 016769 303 INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY-HHATCNAVSFSS----------DCKLMASASEDS 371 (383)
Q Consensus 303 ~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~v~~sp----------d~~~las~s~d~ 371 (383)
...+...+.+++|+|++++|++++.||+|++||+.+++.+..+.+ |...|.+++|+| ++++||+|+.|+
T Consensus 484 ~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg 563 (615)
T 1pgu_A 484 KTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT 563 (615)
T ss_dssp SSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTS
T ss_pred cCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCC
Confidence 334567799999999999999999999999999999999988888 999999999999 999999999999
Q ss_pred cEEEEeCCCC
Q 016769 372 TVALWELYPP 381 (383)
Q Consensus 372 ~i~~w~~~~~ 381 (383)
.|++||+..+
T Consensus 564 ~i~iw~~~~~ 573 (615)
T 1pgu_A 564 NIFIYSVKRP 573 (615)
T ss_dssp CEEEEESSCT
T ss_pred cEEEEECCCC
Confidence 9999999653
No 63
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.4e-30 Score=245.39 Aligned_cols=308 Identities=18% Similarity=0.238 Sum_probs=211.9
Q ss_pred CCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
.+++.++.+|.+.|++++|+|++ +|++|+.||+|++||+.+++++..+..|. ..+.++.+.+..++..+++++.|++
T Consensus 152 ~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~--~~v~~l~~~~~~~~~~l~s~s~d~~ 228 (464)
T 3v7d_B 152 KKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHN--STVRCLDIVEYKNIKYIVTGSRDNT 228 (464)
T ss_dssp TEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEEEESSSCEEEEEEETTSC
T ss_pred CcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCC--CccEEEEEecCCCCCEEEEEcCCCc
Confidence 34667889999999999999988 99999999999999999887776655443 4577777775435678999999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
|++||++++....... . ..... .. ...+.. ......... . ....+..+.+
T Consensus 229 i~vwd~~~~~~~~~~~--~-~~~~~---~~-~~~~~~-------~~~~~~~~~---------~-------~~~~v~~~~~ 278 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHG--E-EHDYP---LV-FHTPEE-------NPYFVGVLR---------G-------HMASVRTVSG 278 (464)
T ss_dssp EEEEECCCCCCC---------CCSS---EE-ESCGGG-------CTTEEEEEC---------C-------CSSCEEEEEE
T ss_pred EEEeeCCCCccccccc--c-cCCcc---eE-eeccCC-------CeEEEEEcc---------C-------ccceEEEEcC
Confidence 9999998764221100 0 00000 00 000000 000000000 0 0001111223
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
++. + +++++.++.|++||+++++.+..+..+ .....++ .+.+.. ..+++|+.||+|++||+
T Consensus 279 ~~~-~-l~~~~~d~~i~vwd~~~~~~~~~~~~~----------~~~v~~~---~~~~~~----~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 279 HGN-I-VVSGSYDNTLIVWDVAQMKCLYILSGH----------TDRIYST---IYDHER----KRCISASMDTTIRIWDL 339 (464)
T ss_dssp ETT-E-EEEEETTSCEEEEETTTTEEEEEECCC----------SSCEEEE---EEETTT----TEEEEEETTSCEEEEET
T ss_pred CCC-E-EEEEeCCCeEEEEECCCCcEEEEecCC----------CCCEEEE---EEcCCC----CEEEEEeCCCcEEEEEC
Confidence 333 3 445667899999999998877766431 1222222 244432 25889999999999999
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW 327 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~ 327 (383)
++ +.++..++.|..+|.++.+++ ..+++++.|+.|++||++.... .... .+...+..++|+|+++++++++
T Consensus 340 ~~-~~~~~~~~~h~~~v~~~~~~~--~~l~s~s~dg~v~vwd~~~~~~--~~~~---~~~~~~~~~~~~~~~~~l~~~~- 410 (464)
T 3v7d_B 340 EN-GELMYTLQGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSR--KFSY---HHTNLSAITTFYVSDNILVSGS- 410 (464)
T ss_dssp TT-TEEEEEECCCSSCEEEEEECS--SEEEEEETTSEEEEEETTTCCE--EEEE---ECTTCCCEEEEEECSSEEEEEE-
T ss_pred CC-CcEEEEEeCCCCcEEEEEEcC--CEEEEEeCCCcEEEEECCCCce--eeee---cCCCCccEEEEEeCCCEEEEec-
Confidence 87 456778889999999999984 6789999999999999986432 2111 2344577889999999999988
Q ss_pred CCcEEEEEcCCCceEEE-ecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 328 DRRVRIYNYRKGSALAI-LKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~-~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
|++|++||+.+++.+.. +..|...|.+++|+ +..++++++.|+.+.+|-
T Consensus 411 dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 411 ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEE
Confidence 99999999999998875 66789999999998 345667777787666554
No 64
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.6e-30 Score=235.74 Aligned_cols=283 Identities=15% Similarity=0.181 Sum_probs=184.9
Q ss_pred CCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCccee-EecccCC
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDG 86 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~D~ 86 (383)
.+++..+.+|.+.|++++|+|||++|++|+.|+ ++||+..+.+...... . .++..+.+.+. .+.+ ++++.|+
T Consensus 9 ~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~--~--~~~~~~~~~~~--~~~~~~~~~~d~ 81 (355)
T 3vu4_A 9 RNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE--M--RHLSKVRMLHR--TNYVAFVTGVKE 81 (355)
T ss_dssp ----------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE--C--SCCCEEEECTT--SSEEEEECSSTT
T ss_pred cCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee--c--CCeEEEEEcCC--CCEEEEEECCcc
Confidence 345667899999999999999999999998775 7899987665443321 1 13444555543 3444 6788899
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
+|++||+.+++... .+ .. .. .+.. ..+.
T Consensus 82 ~v~iWd~~~~~~~~----~~----------~~---~~----------~v~~-------------------------v~~~ 109 (355)
T 3vu4_A 82 VVHIWDDVKKQDVS----RI----------KV---DA----------PVKD-------------------------LFLS 109 (355)
T ss_dssp EEEEEETTTTEEEE----EE----------EC---SS----------CEEE-------------------------EEEC
T ss_pred EEEEEECCCCcEEE----EE----------EC---CC----------ceEE-------------------------EEEc
Confidence 99999998764211 00 00 00 0000 0011
Q ss_pred CCCCceeeeccCCcceEEEEecCCC-CeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEE-EeCCCcEEE
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA-GYEDGSILV 244 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-g~~dg~i~~ 244 (383)
+ ..++++. ++.|++||+.+. +.+..+.. ...+..+.+ ...+++ |+.||.|++
T Consensus 110 ~---~~~~~~~--~~~i~i~d~~~~~~~~~~~~~----------------~~~~~~~s~-----~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 110 R---EFIVVSY--GDVISVFKFGNPWKRITDDIR----------------FGGVCEFSN-----GLLVYSNEFNLGQIHI 163 (355)
T ss_dssp S---SEEEEEE--TTEEEEEESSTTCCBSSCCEE----------------EEEEEEEET-----TEEEEEESSCTTCEEE
T ss_pred C---CEEEEEE--cCEEEEEECCCCceeeEEecc----------------CCceEEEEc-----cEEEEeCCCcCcEEEE
Confidence 1 1233332 568999999887 54433321 011112222 112333 789999999
Q ss_pred EeCCCCC--------------Cc-eeeeeccccCeEEEEEeCCCCceEEEEcCCc-EEEEEccCCCCeeEEeeeee-c-C
Q 016769 245 WDIRNPG--------------IP-LTAMKVHLEPVLCLSIDESCNGGISGGADQK-IVLYNLDHSTGSCVIKKEIN-L-E 306 (383)
Q Consensus 245 wdl~~~~--------------~~-~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~-i~~wdl~~~~~~~~~~~~~~-~-~ 306 (383)
||+++.. .+ +..+++|..+|.+++|++++..+++++.|++ |++||+..... .. .+. . +
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~--~~--~~~~g~h 239 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL--VR--EFRRGLD 239 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE--EE--EEECTTC
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EE--EEEcCCC
Confidence 9998643 12 5678899999999999999999999999998 99999975432 22 233 2 6
Q ss_pred CCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCce--EEEec---------------------ccccceeEEEEeCCCCE
Q 016769 307 RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA--LAILK---------------------YHHATCNAVSFSSDCKL 363 (383)
Q Consensus 307 ~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~---------------------~h~~~v~~v~~spd~~~ 363 (383)
...|.+++|+|++++|++++.|++|++||+..+.. ...+. .+......++|+||+++
T Consensus 240 ~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~ 319 (355)
T 3vu4_A 240 RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSL 319 (355)
T ss_dssp CSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEE
T ss_pred CCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCE
Confidence 67899999999999999999999999999976431 11111 11223467899999999
Q ss_pred EEEEeCCCcEEEEeCC
Q 016769 364 MASASEDSTVALWELY 379 (383)
Q Consensus 364 las~s~d~~i~~w~~~ 379 (383)
|++++.||.+++|++.
T Consensus 320 l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 320 VVVWPHTRMIETFKVV 335 (355)
T ss_dssp EEEETTTTEEEEEEEE
T ss_pred EEEEeCCCeEEEEEEE
Confidence 9999999999999975
No 65
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.4e-30 Score=259.03 Aligned_cols=293 Identities=16% Similarity=0.207 Sum_probs=218.3
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
+...+|.+|.+.|++++|+|++++|++|+.||.|+|||+.+++.+..+..|. ..+.++.|++ ++.+|++++.|++|
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~--~~v~~~~~s~--~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTE--TPVRAGKFIA--RKNWIIVGSDDFRI 79 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEEEEEG--GGTEEEEEETTSEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCC--CcEEEEEEeC--CCCEEEEEeCCCeE
Confidence 4567899999999999999999999999999999999998877766655443 4588899998 46889999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||+++++.. ..+..+.. . .....++++
T Consensus 80 ~vw~~~~~~~~----~~~~~~~~----------------------~-------------------------v~~~~~s~~ 108 (814)
T 3mkq_A 80 RVFNYNTGEKV----VDFEAHPD----------------------Y-------------------------IRSIAVHPT 108 (814)
T ss_dssp EEEETTTCCEE----EEEECCSS----------------------C-------------------------EEEEEECSS
T ss_pred EEEECCCCcEE----EEEecCCC----------------------C-------------------------EEEEEEeCC
Confidence 99999876421 11100000 0 000122344
Q ss_pred CCceeeeccCCcceEEEEecCCCC-eeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
++ ++ ++++.++.|++||++++. ....+.. +.....++. |.|. +...+++++.||+|++||+
T Consensus 109 ~~-~l-~~~~~dg~i~vw~~~~~~~~~~~~~~----------~~~~v~~~~---~~p~---~~~~l~~~~~dg~v~vwd~ 170 (814)
T 3mkq_A 109 KP-YV-LSGSDDLTVKLWNWENNWALEQTFEG----------HEHFVMCVA---FNPK---DPSTFASGCLDRTVKVWSL 170 (814)
T ss_dssp SS-EE-EEEETTSEEEEEEGGGTSEEEEEEEC----------CSSCEEEEE---EETT---EEEEEEEEETTSEEEEEET
T ss_pred CC-EE-EEEcCCCEEEEEECCCCceEEEEEcC----------CCCcEEEEE---EEcC---CCCEEEEEeCCCeEEEEEC
Confidence 43 33 456678999999998874 3333332 112233332 4441 1236889999999999999
Q ss_pred CCCCCceeeeeccccCeEEEEEeC--CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDE--SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
++..........|..++.++.+++ ++..+++++.|+.|++||+.... . ...+..+...+.+++|+|++++++++
T Consensus 171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~--~--~~~~~~~~~~v~~~~~~~~~~~l~~~ 246 (814)
T 3mkq_A 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS--C--VATLEGHMSNVSFAVFHPTLPIIISG 246 (814)
T ss_dssp TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE--E--EEEEECCSSCEEEEEECSSSSEEEEE
T ss_pred CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc--E--EEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 875543333334448899999988 88889999999999999987543 2 22344566789999999999999999
Q ss_pred eCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCC--EEEEEeCCCcEEEEeCC
Q 016769 326 GWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK--LMASASEDSTVALWELY 379 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~--~las~s~d~~i~~w~~~ 379 (383)
+.||+|++||+.+++.+..+..|...+.+++|+|+++ ++++++ |+.+.+|++.
T Consensus 247 ~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 301 (814)
T 3mkq_A 247 SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLSLG 301 (814)
T ss_dssp ETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE-TTEEEEEECS
T ss_pred eCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe-CCCEEEEEcC
Confidence 9999999999999999999999999999999999997 455555 6668888875
No 66
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.98 E-value=1.1e-29 Score=230.76 Aligned_cols=288 Identities=18% Similarity=0.225 Sum_probs=206.6
Q ss_pred ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCC
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~ 95 (383)
-|.++|++++|+|||++|+++..++.+.+|+............| ...+.++++++ ++..+++++ |++|++||+++
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~--~~~~l~~~~-dg~i~iw~~~~ 81 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNH--GEVVCAVTISN--PTRHVYTGG-KGCVKVWDISH 81 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECC--SSCCCEEEECS--SSSEEEEEC-BSEEEEEETTS
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccC--CCceEEEEEec--CCcEEEEcC-CCeEEEEECCC
Confidence 35689999999999999999998888877766544333322233 34678889988 467888888 99999999987
Q ss_pred CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeee
Q 016769 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAV 175 (383)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (383)
+..... ...+. ... . .. ......+.+++. +++
T Consensus 82 ~~~~~~-~~~~~----------~~~-~---------~~-------------------------~v~~~~~~~~~~-~l~- 113 (337)
T 1gxr_A 82 PGNKSP-VSQLD----------CLN-R---------DN-------------------------YIRSCKLLPDGC-TLI- 113 (337)
T ss_dssp TTCCSC-SEEEE----------CSC-T---------TS-------------------------BEEEEEECTTSS-EEE-
T ss_pred CCceee-eeccc----------ccC-C---------CC-------------------------cEEEEEEcCCCC-EEE-
Confidence 642111 00000 000 0 00 000011233433 344
Q ss_pred ccCCcceEEEEecCCCCe--eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc
Q 016769 176 AGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 253 (383)
Q Consensus 176 ~g~~~~~i~~Wdl~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~ 253 (383)
+++.++.|++||+++++. ...+.. +.....++ .+.++ ...+++++.|+.|++||+++. ..
T Consensus 114 ~~~~d~~i~~~d~~~~~~~~~~~~~~----------~~~~i~~~---~~~~~----~~~l~~~~~dg~v~~~d~~~~-~~ 175 (337)
T 1gxr_A 114 VGGEASTLSIWDLAAPTPRIKAELTS----------SAPACYAL---AISPD----SKVCFSCCSDGNIAVWDLHNQ-TL 175 (337)
T ss_dssp EEESSSEEEEEECCCC--EEEEEEEC----------SSSCEEEE---EECTT----SSEEEEEETTSCEEEEETTTT-EE
T ss_pred EEcCCCcEEEEECCCCCcceeeeccc----------CCCceEEE---EECCC----CCEEEEEeCCCcEEEEeCCCC-ce
Confidence 456679999999988763 233321 11122222 24443 235889999999999999874 45
Q ss_pred eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEE
Q 016769 254 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 333 (383)
Q Consensus 254 ~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~i 333 (383)
...++.|..++.++.+++++..+++++.|+.|++||++... .... . .+...+.+++|+|+++++++++.|+.|++
T Consensus 176 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~--~~~~--~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~ 250 (337)
T 1gxr_A 176 VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR--QLQQ--H-DFTSQIFSLGYCPTGEWLAVGMESSNVEV 250 (337)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEE--E-ECSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCc--eEee--e-cCCCceEEEEECCCCCEEEEEcCCCcEEE
Confidence 67788899999999999999999999999999999997543 2211 1 23467999999999999999999999999
Q ss_pred EEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 334 YNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 334 wd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
||+.+++.. .+..|...|.+++|+|++++|++++.|+.|++||+..
T Consensus 251 ~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 251 LHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp EETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 999888754 5678999999999999999999999999999999864
No 67
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.98 E-value=3.9e-30 Score=236.95 Aligned_cols=256 Identities=18% Similarity=0.254 Sum_probs=172.2
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccc--cccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW--VHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
.....+|.+.|++|+|+|++. +++++.||+|+|||+.+++...... ...+...+.+++++| ++++|++++.|++|
T Consensus 87 ~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp--dg~~l~sgs~dg~v 163 (357)
T 4g56_B 87 CTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS--DGTQAVSGGKDFSV 163 (357)
T ss_dssp CSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECS--SSSEEEEEETTSCE
T ss_pred ecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC--CCCEEEEEeCCCeE
Confidence 345678999999999999985 5568899999999998776543322 112234688899998 46899999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||++++.... .+..+.. .+ ....+.++
T Consensus 164 ~iwd~~~~~~~~----~~~~h~~----------------------~v-------------------------~~v~~s~~ 192 (357)
T 4g56_B 164 KVWDLSQKAVLK----SYNAHSS----------------------EV-------------------------NCVAACPG 192 (357)
T ss_dssp EEEETTTTEEEE----EECCCSS----------------------CE-------------------------EEEEECTT
T ss_pred EEEECCCCcEEE----EEcCCCC----------------------CE-------------------------EEEEEccC
Confidence 999998763210 0000000 00 00112233
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
+.. ++++++.|++|++||+++++.+..+... .......+ + .|.|.+ ...+++|+.|+.|++||++
T Consensus 193 ~~~-~~~s~~~dg~v~~wd~~~~~~~~~~~~~--------~~~~~v~~--v-~~sp~~---~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 193 KDT-IFLSCGEDGRILLWDTRKPKPATRIDFC--------ASDTIPTS--V-TWHPEK---DDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp CSS-CEEEEETTSCEEECCTTSSSCBCBCCCT--------TCCSCEEE--E-EECTTS---TTEEEEEESSSCEEEEESS
T ss_pred CCc-eeeeeccCCceEEEECCCCceeeeeeec--------cccccccc--h-hhhhcc---cceEEEeecccceeEEECC
Confidence 333 3445567899999999998765444321 11111222 2 355542 2257789999999999998
Q ss_pred CCCCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC-CCcEEEEEe
Q 016769 249 NPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP-DSKIAATAG 326 (383)
Q Consensus 249 ~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p-~~~~l~s~~ 326 (383)
++ ..+..+..|..+|.+++|++++. .+++++.|++|++||++.. ... ....|...|++++|+| ++++|++++
T Consensus 258 ~~-~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~--~~~---~~~~H~~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 258 NP-DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS--EVF---RDLSHRDFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp CG-GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC--EEE---EECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred CC-cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC--cEe---EECCCCCCEEEEEEeCCCCCEEEEEc
Confidence 74 45677889999999999998774 6789999999999998743 222 1234677899999998 789999999
Q ss_pred CCCcEEEEEcCCCce
Q 016769 327 WDRRVRIYNYRKGSA 341 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~ 341 (383)
.||+|++||+.+...
T Consensus 332 ~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 332 WDHKVLHHHLPSEGR 346 (357)
T ss_dssp TTSCEEEEECC----
T ss_pred CCCeEEEEECCCCCc
Confidence 999999999976443
No 68
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.98 E-value=5.2e-30 Score=232.42 Aligned_cols=258 Identities=17% Similarity=0.245 Sum_probs=177.3
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
++.+|.+|+..|++++|+|++++|+|||.|++|+|||+.+++++..+..|. ..+.++++.+ ++..+++++.|++|+
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~s~s~D~~i~ 132 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHK--SDVMSVDIDK--KASMIISGSRDKTIK 132 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEEEECT--TSCEEEEEETTSCEE
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCC--CcEEEEEEcC--CCCEEEEEeCCCeEE
Confidence 567899999999999999999999999999999999999888776665554 4588889988 468899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+||+.... ...+..+... +....... ......+
T Consensus 133 vwd~~~~~-----~~~~~~h~~~----------------------v~~~~~~~-------------------~~~~~~~- 165 (319)
T 3frx_A 133 VWTIKGQC-----LATLLGHNDW----------------------VSQVRVVP-------------------NEKADDD- 165 (319)
T ss_dssp EEETTSCE-----EEEECCCSSC----------------------EEEEEECC-------------------C-------
T ss_pred EEECCCCe-----EEEEeccCCc----------------------EEEEEEcc-------------------CCCCCCC-
Confidence 99986421 1111000000 00000000 0000001
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
..++++++.|+.|++||+++.+....+..+ ...+.++ .+.|+. ..+++|+.||+|++||+++
T Consensus 166 -~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h----------~~~v~~~---~~sp~g----~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 166 -SVTIISAGNDKMVKAWNLNQFQIEADFIGH----------NSNINTL---TASPDG----TLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEEEEEECCC----------CSCEEEE---EECTTS----SEEEEEETTCEEEEEETTT
T ss_pred -ccEEEEEeCCCEEEEEECCcchhheeecCC----------CCcEEEE---EEcCCC----CEEEEEeCCCeEEEEECCC
Confidence 124556677899999999988766555421 1222222 344432 3688999999999999987
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee----eecCCCCeEEEEECCCCcEEEEE
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE----INLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~----~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
. ..+..+.. ..+|.+++|+|++..+++++ ++.+++|+++.......+... ...+...+.+++|+|||++|++|
T Consensus 228 ~-~~~~~~~~-~~~v~~~~~sp~~~~la~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg 304 (319)
T 3frx_A 228 K-KAMYTLSA-QDEVFSLAFSPNRYWLAAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAG 304 (319)
T ss_dssp T-EEEEEEEC-CSCEEEEEECSSSSEEEEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEE
T ss_pred C-cEEEEecC-CCcEEEEEEcCCCCEEEEEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEe
Confidence 4 44555554 46899999999988776665 556999998753211111111 11234568899999999999999
Q ss_pred eCCCcEEEEEcCCC
Q 016769 326 GWDRRVRIYNYRKG 339 (383)
Q Consensus 326 ~~dg~i~iwd~~~~ 339 (383)
+.||+|++||+.++
T Consensus 305 ~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 305 YTDNVIRVWQVMTA 318 (319)
T ss_dssp ETTSCEEEEEEEEC
T ss_pred ecCceEEEEEEeec
Confidence 99999999999654
No 69
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=4.7e-30 Score=242.76 Aligned_cols=328 Identities=10% Similarity=0.140 Sum_probs=196.4
Q ss_pred ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccc-----------cccccccccc----------ceeeeeeecCCC
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT-----------VSSSWVHSAA----------HGIVSVATGPSI 74 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~-----------~~~~~~~~~~----------~~~~~~~~~~~~ 74 (383)
.|.+.|++|+|+|+|++||+|+.||.|+|||+.+++. ...+..|... ..+.++.+.+..
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 3689999999999999999999999999999876652 3333334311 458889999852
Q ss_pred CcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCccc-c----cCcc
Q 016769 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETV-D----TDSL 149 (383)
Q Consensus 75 ~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~ 149 (383)
+...|++++.|++|++||+.++..... ...+........ . ... .. ............. . ....
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~-~~~~~~~~g~~~--~----~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPE-GYNLKEEDGRYR--D----PTT----VT-TLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEE-CCSCC--------------CCC----CC-SCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CcceEEEeCCCCeEEEEecccccCCcc-eecccCcccccc--C----ccc----cc-ceEeccccchheeeeccceEEec
Confidence 226899999999999999975421000 000000000000 0 000 00 0000000000000 0 0000
Q ss_pred ccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCC-eeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCC
Q 016769 150 CDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ 228 (383)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 228 (383)
..+.. ......+.+++. ++++ | .|+.|++||+++.. .+..+.... . ....+...+.++ .|.|..
T Consensus 174 ~~h~~----~v~~~~~~~~~~-~l~s-~-~d~~i~iwd~~~~~~~~~~~~~~~--~-~~~~~~~~v~~~---~~~p~~-- 238 (447)
T 3dw8_B 174 NAHTY----HINSISINSDYE-TYLS-A-DDLRINLWHLEITDRSFNIVDIKP--A-NMEELTEVITAA---EFHPNS-- 238 (447)
T ss_dssp SCCSS----CCCEEEECTTSS-EEEE-E-CSSEEEEEETTEEEEEEEEEECCC--S-SGGGCCCCEEEE---EECSSC--
T ss_pred cCCCc----ceEEEEEcCCCC-EEEE-e-CCCeEEEEECCCCCceeeeeeccc--c-cccccCcceEEE---EECCCC--
Confidence 00000 011122334443 4444 5 58999999998543 333221000 0 000112222222 355532
Q ss_pred CceEEEEEeCCCcEEEEeCCCCCC---ceeeeecccc------------CeEEEEEeCCCCceEEEEcCCcEEEEEccC-
Q 016769 229 GFVNVLAGYEDGSILVWDIRNPGI---PLTAMKVHLE------------PVLCLSIDESCNGGISGGADQKIVLYNLDH- 292 (383)
Q Consensus 229 ~~~~~~sg~~dg~i~~wdl~~~~~---~~~~~~~h~~------------~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~- 292 (383)
...+++|+.||+|++||+++... ....+..|.. +|.++.|++++..+++++. +.|++||+..
T Consensus 239 -~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~ 316 (447)
T 3dw8_B 239 -CNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNME 316 (447)
T ss_dssp -TTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCC
T ss_pred -CcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCC
Confidence 13688999999999999987543 1466777776 8999999999999999888 9999999975
Q ss_pred CCCeeEEeeeeecCCC---------------CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecc----------
Q 016769 293 STGSCVIKKEINLERP---------------GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY---------- 347 (383)
Q Consensus 293 ~~~~~~~~~~~~~~~~---------------~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------- 347 (383)
...... ...+.. .+..++|+|++++|++|+.||+|++||+.+++.+. +.+
T Consensus 317 ~~~~~~----~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~ 391 (447)
T 3dw8_B 317 NRPVET----YQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTV 391 (447)
T ss_dssp SSCSCC----EESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCB
T ss_pred ccccce----eeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccc
Confidence 322111 112211 13348999999999999999999999999887653 222
Q ss_pred -----------------------cccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 348 -----------------------HHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 348 -----------------------h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+...|.+++|+|++++||+++.|+ +++|..
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 392 LKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp CCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred cCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 345688999999999999999886 777764
No 70
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=6.5e-31 Score=253.07 Aligned_cols=146 Identities=14% Similarity=0.160 Sum_probs=122.7
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEE--EEeCCC-CceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCL--SIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~--~~~~~~-~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
.+++|+.||+|++||++++..+...+..|..+|.++ .+.+++ ..+++++.|++|+|||++.......+.. .....
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~--~~~~~ 356 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVS--RFRGS 356 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEE--ECSCC
T ss_pred eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccc--ccccC
Confidence 488999999999999987655666788999999999 457776 6789999999999999975432222211 11112
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+.+++|+|+++.+++++.|++|++||++++..+.++.+|...|.+|+|||+|++||+|+.|++|++||+.
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 47889999999999999999999999999998888888999999999999999999999999999999974
No 71
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.2e-30 Score=261.21 Aligned_cols=260 Identities=18% Similarity=0.217 Sum_probs=191.0
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCc--ccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
+.++.||++.|++++|+|++++|++|+.||+|+|||+. +.+....+..|. ..+.++.+++..+++.+++++.|++|
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~--~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHE--GPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCS--SCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCc--CceEEEEecCCCCCCEEEEEeCCCeE
Confidence 46789999999999999999999999999999999987 334444444443 46888998874336889999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||+.++... .+ ..+
T Consensus 80 ~vwd~~~~~~~-----~~---------~~~-------------------------------------------------- 95 (753)
T 3jro_A 80 LIWKEENGRWS-----QI---------AVH-------------------------------------------------- 95 (753)
T ss_dssp EEEEEETTEEE-----EE---------EEE--------------------------------------------------
T ss_pred EEEECCCCccc-----cc---------ccc--------------------------------------------------
Confidence 99998764200 00 000
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
.+ ..+.| .++ .+.|.. ....+++|+.||+|++||++
T Consensus 96 -------~~-h~~~V-------------------------------~~v---~~sp~~--~~~~l~sgs~dg~I~vwdl~ 131 (753)
T 3jro_A 96 -------AV-HSASV-------------------------------NSV---QWAPHE--YGPLLLVASSDGKVSVVEFK 131 (753)
T ss_dssp -------CC-CSSCE-------------------------------EEE---EECCGG--GCSEEEEEETTSEEEEEECC
T ss_pred -------cC-CCCCe-------------------------------EEE---EECCCC--CCCEEEEEeCCCcEEEEEee
Confidence 00 00000 000 111110 01147788899999999988
Q ss_pred CCC-CceeeeeccccCeEEEEEeC-------------CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEE
Q 016769 249 NPG-IPLTAMKVHLEPVLCLSIDE-------------SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 249 ~~~-~~~~~~~~h~~~v~~~~~~~-------------~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~ 314 (383)
+.. .....+..|..+|.++.|++ ++..+++|+.|+.|++||+............+..+...|.+++
T Consensus 132 ~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~ 211 (753)
T 3jro_A 132 ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211 (753)
T ss_dssp SSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred cCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEE
Confidence 652 23345677889999999988 4778999999999999999876554444445566778899999
Q ss_pred ECCC---CcEEEEEeCCCcEEEEEcCCCc-----eEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 315 IRPD---SKIAATAGWDRRVRIYNYRKGS-----ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 315 ~~p~---~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
|+|+ ++++++++.||+|++||+.+++ .......|...|.+++|+|+|++|++|+.||.|++|++..
T Consensus 212 ~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 212 WSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp ECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred eccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 9999 8999999999999999998864 3334456889999999999999999999999999999863
No 72
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=1.1e-28 Score=225.70 Aligned_cols=240 Identities=20% Similarity=0.312 Sum_probs=177.0
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+.++.+++ ++..|++++.|++|++||+.++... ..+..+..
T Consensus 56 ~~v~~~~~s~--d~~~l~s~s~Dg~v~iWd~~~~~~~----~~~~~~~~------------------------------- 98 (340)
T 1got_B 56 AKIYAMHWGT--DSRLLLSASQDGKLIIWDSYTTNKV----HAIPLRSS------------------------------- 98 (340)
T ss_dssp SCEEEEEECT--TSSEEEEEETTTEEEEEETTTCCEE----EEEECSSS-------------------------------
T ss_pred CceEEEEECC--CCCEEEEEeCCCcEEEEECCCCCcc----eEeecCCc-------------------------------
Confidence 4688899988 4689999999999999999776321 11100000
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCe----eeEeccCcCCCCCCcCCCCCceeeE
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAER----CTRLHQNSCGGSPNFSSKGRGMCMA 218 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~----~~~~~~~~~~~s~~~~~~~~~~~~~ 218 (383)
......+++++. ++ ++|+.|+.+++||+.+... ...+.. +.+...+..
T Consensus 99 ----------------~v~~~~~s~~~~-~l-~s~~~d~~v~iw~~~~~~~~~~~~~~~~~----------h~~~v~~~~ 150 (340)
T 1got_B 99 ----------------WVMTCAYAPSGN-YV-ACGGLDNICSIYNLKTREGNVRVSRELAG----------HTGYLSCCR 150 (340)
T ss_dssp ----------------CEEEEEECTTSS-EE-EEEETTCEEEEEETTTCSBSCEEEEEEEC----------CSSCEEEEE
T ss_pred ----------------cEEEEEECCCCC-EE-EEEeCCCeEEEEECccCCCcceeEEEecC----------CCccEEEEE
Confidence 000012234443 44 4556789999999987542 112211 112222222
Q ss_pred EEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeE
Q 016769 219 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV 298 (383)
Q Consensus 219 ~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~ 298 (383)
|.+.+ .+++++.|++|++||+++. ..+..+.+|..+|.++.|++++..+++|+.|+.|++||+......
T Consensus 151 ---~~~~~-----~l~s~s~d~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~-- 219 (340)
T 1got_B 151 ---FLDDN-----QIVTSSGDTTCALWDIETG-QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR-- 219 (340)
T ss_dssp ---EEETT-----EEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEE--
T ss_pred ---ECCCC-----cEEEEECCCcEEEEECCCC-cEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeE--
Confidence 33321 4889999999999999874 456778899999999999999999999999999999999754322
Q ss_pred EeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecc--cccceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 299 IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY--HHATCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 299 ~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
..+..+...|.+++|+|++++|++|+.|++|++||+++++.+..+.. +...|.+++|+|+|++|++|+.|+.|++|
T Consensus 220 --~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vw 297 (340)
T 1got_B 220 --QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297 (340)
T ss_dssp --EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred --EEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEE
Confidence 23445667899999999999999999999999999999888776642 33479999999999999999999999999
Q ss_pred eCCC
Q 016769 377 ELYP 380 (383)
Q Consensus 377 ~~~~ 380 (383)
|+..
T Consensus 298 d~~~ 301 (340)
T 1got_B 298 DALK 301 (340)
T ss_dssp ETTT
T ss_pred Eccc
Confidence 9854
No 73
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=1.9e-29 Score=234.34 Aligned_cols=273 Identities=19% Similarity=0.278 Sum_probs=186.6
Q ss_pred CCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEE
Q 016769 38 TGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLS 117 (383)
Q Consensus 38 ~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (383)
.+..+..|+.....+...+..|. ..+.+++|+| ++.+|+|++.|++|++||+.+++.. ..+.
T Consensus 44 ~~~~~~~~~~~~~~~~~~l~gH~--~~V~~~~~sp--~~~~l~s~s~D~~v~iWd~~~~~~~----~~~~---------- 105 (380)
T 3iz6_a 44 QGRTAVSFNPTDLVCCRTLQGHS--GKVYSLDWTP--EKNWIVSASQDGRLIVWNALTSQKT----HAIK---------- 105 (380)
T ss_dssp HGGGCCCCCCCCCEEEEEECCCS--SCEEEEEECT--TSSCEEEEETTSEEEEEETTTTEEE----EEEE----------
T ss_pred ccccccccccceeEEeecccccc--cEEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCccc----eEEe----------
Confidence 34455667776666655665554 4688999998 4689999999999999999776311 0000
Q ss_pred eeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEe
Q 016769 118 LVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL 197 (383)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~ 197 (383)
.... . .....+.+++. + +++|+.|+.+++||+.+.......
T Consensus 106 ---~h~~---------~-------------------------v~~~~~s~~g~-~-las~~~d~~v~iw~~~~~~~~~~~ 146 (380)
T 3iz6_a 106 ---LHCP---------W-------------------------VMECAFAPNGQ-S-VACGGLDSACSIFNLSSQADRDGN 146 (380)
T ss_dssp ---CCCT---------T-------------------------CCCCEECTTSS-E-EEECCSSSCCEEEECCCCSSCCCS
T ss_pred ---cCCC---------C-------------------------EEEEEECCCCC-E-EEEeeCCCcEEEEECCCCccccCC
Confidence 0000 0 00012334443 3 455677899999999764311000
Q ss_pred ccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeee-----eccccCeEEEEEeC-
Q 016769 198 HQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM-----KVHLEPVLCLSIDE- 271 (383)
Q Consensus 198 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~-----~~h~~~v~~~~~~~- 271 (383)
.........+.+...+. .|.|.. ...+++|+.|++|++||++++. .+..+ .+|...|.++.+.+
T Consensus 147 ---~~~~~~~~gh~~~v~~~---~~~~~~---~~~l~s~s~D~~i~~wd~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~ 216 (380)
T 3iz6_a 147 ---MPVSRVLTGHKGYASSC---QYVPDQ---ETRLITGSGDQTCVLWDVTTGQ-RISIFGSEFPSGHTADVLSLSINSL 216 (380)
T ss_dssp ---STTCCBCCCCSSCCCCC---BCCSSS---SSCEEEECTTSCEEEECTTTCC-EEEEECCCSSSSCCSCEEEEEECSS
T ss_pred ---ccceeeccCCCcceEEE---EEecCC---CCEEEEECCCCcEEEEEcCCCc-EEEEeecccCCCCccCeEEEEeecC
Confidence 00000000111111111 233321 1248899999999999998754 34434 57889999999976
Q ss_pred CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccccc-
Q 016769 272 SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA- 350 (383)
Q Consensus 272 ~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~- 350 (383)
++..+++|+.|+.|++||++..... ...+..+...|++++|+|++++|++|+.|++|++||+++++.+..+..+..
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~---~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~ 293 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRA---VRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDR 293 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCC---CEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSS
T ss_pred CCCEEEEEECCCeEEEEECCCCCcc---eEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccc
Confidence 6678899999999999999743211 123445677899999999999999999999999999999998887765432
Q ss_pred ------ceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 351 ------TCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 351 ------~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.|.+++|+|+|++|++|+.||.|++||+..
T Consensus 294 ~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~ 329 (380)
T 3iz6_a 294 NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL 329 (380)
T ss_dssp SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTT
T ss_pred cccccCceEEEEECCCCCEEEEEECCCCEEEEECCC
Confidence 489999999999999999999999999753
No 74
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=2e-28 Score=224.41 Aligned_cols=261 Identities=15% Similarity=0.228 Sum_probs=174.8
Q ss_pred eeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc--cccccccccccceeeeeeecCCCCcceeEecccCCeEEEe
Q 016769 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (383)
Q Consensus 14 l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~W 91 (383)
..+|.+.|++++|+|++++|++|+.|+++++|+..... ++..+..|. ..+.+++++| +++.|++++.|++|++|
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~--~~v~~v~~sp--~~~~l~s~s~D~~v~iw 132 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHE--NEVKSVAWAP--SGNLLATCSRDKSVWVW 132 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCS--SCEEEEEECT--TSSEEEEEETTSCEEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCC--CCceEEEEeC--CCCEEEEEECCCeEEEE
Confidence 36999999999999999999999999999999986543 334444443 4688999998 46899999999999999
Q ss_pred ecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCc
Q 016769 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPK 171 (383)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (383)
|+.++... ..+ ....... ..+ ....+.+++.
T Consensus 133 d~~~~~~~----~~~----------~~~~~h~---------~~v-------------------------~~~~~~p~~~- 163 (345)
T 3fm0_A 133 EVDEEDEY----ECV----------SVLNSHT---------QDV-------------------------KHVVWHPSQE- 163 (345)
T ss_dssp EECTTSCE----EEE----------EEECCCC---------SCE-------------------------EEEEECSSSS-
T ss_pred ECCCCCCe----EEE----------EEecCcC---------CCe-------------------------EEEEECCCCC-
Confidence 99765310 000 0000000 000 0011233433
Q ss_pred eeeeccCCcceEEEEecCCCCee--eEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
++++++.|++|++||++++... ..+.. +...+.++ .|.|+. ..+++|+.|++|++||+..
T Consensus 164 -~l~s~s~d~~i~~w~~~~~~~~~~~~~~~----------h~~~v~~l---~~sp~g----~~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 164 -LLASASYDDTVKLYREEEDDWVCCATLEG----------HESTVWSL---AFDPSG----QRLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp -CEEEEETTSCEEEEEEETTEEEEEEEECC----------CSSCEEEE---EECTTS----SEEEEEETTSCEEEEEEEC
T ss_pred -EEEEEeCCCcEEEEEecCCCEEEEEEecC----------CCCceEEE---EECCCC----CEEEEEeCCCeEEEecccc
Confidence 3455677899999999877532 33322 11222222 355542 3688999999999999743
Q ss_pred CCC--------------ceeeee-ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCe----eEEee-eeecCCCC
Q 016769 250 PGI--------------PLTAMK-VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGS----CVIKK-EINLERPG 309 (383)
Q Consensus 250 ~~~--------------~~~~~~-~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~----~~~~~-~~~~~~~~ 309 (383)
+.. ++..+. .|...|.+++|++.+..+++++.|+.|++|+++..... ..+.. ....|...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~ 305 (345)
T 3fm0_A 226 PGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQD 305 (345)
T ss_dssp TTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSC
T ss_pred CCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCc
Confidence 221 112233 37889999999999999999999999999998753211 11111 12356778
Q ss_pred eEEEEECCCC-cEEEEEeCCCcEEEEEcCCCceEEEe
Q 016769 310 ISGTSIRPDS-KIAATAGWDRRVRIYNYRKGSALAIL 345 (383)
Q Consensus 310 i~~~~~~p~~-~~l~s~~~dg~i~iwd~~~~~~~~~~ 345 (383)
|++++|+|++ .+||+++.||+|++|++.+++.+...
T Consensus 306 V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 306 VNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp EEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred EeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 9999999997 59999999999999999888766443
No 75
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.4e-29 Score=225.19 Aligned_cols=259 Identities=18% Similarity=0.211 Sum_probs=165.1
Q ss_pred Ceeee-ee-cCCceeeEEEeCCCCeEEEecCCCeEEEeeCccc-------ccccccccccccceeeeeeecCCCCcceeE
Q 016769 10 PVAVL-RG-HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH-------RTVSSSWVHSAAHGIVSVATGPSIGLNKVI 80 (383)
Q Consensus 10 ~~~~l-~g-H~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (383)
...++ .+ |.+.|++|+|+|++++|++|+.|++|+|||.... +++..+..|. ..+.+++|+| ++.+|+
T Consensus 48 ~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~~sp--~g~~la 123 (330)
T 2hes_X 48 LIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHE--NEVKGVAWSN--DGYYLA 123 (330)
T ss_dssp EEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC------CEEEEEECT--TSCEEE
T ss_pred EEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCC--CcEEEEEECC--CCCEEE
Confidence 34455 44 9999999999999999999999999999998532 1222333333 4588899998 468999
Q ss_pred ecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccc
Q 016769 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFE 160 (383)
Q Consensus 81 s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
+++.|++|++||+.+..... ..+. . ..... .. .
T Consensus 124 s~s~D~~v~iwd~~~~~~~~---~~~~---------~-~~~h~---------~~-------------------------v 156 (330)
T 2hes_X 124 TCSRDKSVWIWETDESGEEY---ECIS---------V-LQEHS---------QD-------------------------V 156 (330)
T ss_dssp EEETTSCEEEEECCTTCCCC---EEEE---------E-ECCCS---------SC-------------------------E
T ss_pred EEeCCCEEEEEeccCCCCCe---EEEE---------E-eccCC---------Cc-------------------------e
Confidence 99999999999995331100 0000 0 00000 00 0
Q ss_pred eecccCCCCCceeeeccCCcceEEEEecCCC--CeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeC
Q 016769 161 IIDDVPAEGPKYMAVAGEQLSEVEIWDLNTA--ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 238 (383)
Q Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~--~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~ 238 (383)
....+.+++. ++++++.|++|++||+.++ +++..+..+ ...+.++ .|.|.. ....+++|+.
T Consensus 157 ~~v~~~p~~~--~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h----------~~~v~~~---~~~~~~--~~~~l~s~s~ 219 (330)
T 2hes_X 157 KHVIWHPSEA--LLASSSYDDTVRIWKDYDDDWECVAVLNGH----------EGTVWSS---DFDKTE--GVFRLCSGSD 219 (330)
T ss_dssp EEEEECSSSS--EEEEEETTSCEEEEEEETTEEEEEEEECCC----------SSCEEEE---EECCSS--SSCEEEEEET
T ss_pred EEEEECCCCC--EEEEEcCCCeEEEEECCCCCeeEEEEccCC----------CCcEEEE---EecCCC--CeeEEEEEeC
Confidence 0011233333 3456677899999999776 344444321 1222222 344432 1235889999
Q ss_pred CCcEEEEeCCCCC-------Cceeeeec-cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC-C
Q 016769 239 DGSILVWDIRNPG-------IPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP-G 309 (383)
Q Consensus 239 dg~i~~wdl~~~~-------~~~~~~~~-h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~-~ 309 (383)
|++|++||++... .....+.. |..+|.+++|++.+ .+++++.|+.|++||........ .......+.. .
T Consensus 220 D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~-~~~~~~~h~~~~ 297 (330)
T 2hes_X 220 DSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKV-FAKRALCHGVYE 297 (330)
T ss_dssp TSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEE-EEEESCTTTTSC
T ss_pred CCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEE-Eeccccccccce
Confidence 9999999986531 12233333 88999999998654 78999999999999986432111 1122234444 7
Q ss_pred eEEEEECC--CCcEEEEEeCCCcEEEEEcCC
Q 016769 310 ISGTSIRP--DSKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 310 i~~~~~~p--~~~~l~s~~~dg~i~iwd~~~ 338 (383)
+++++|+| ++++||+|+.||+|++||+++
T Consensus 298 v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 298 INVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 99999999 788999999999999999864
No 76
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=6.4e-29 Score=227.51 Aligned_cols=265 Identities=18% Similarity=0.242 Sum_probs=174.5
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
+..++.+|...|++++|+|++.+|+||+.|++|++||+.+++++..+..|. ..+.+++++| +++.|++++.|++|+
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~--~~v~~v~~sp--~~~~l~s~~~d~~i~ 143 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ--SEVYSVAFSP--DNRQILSAGAEREIK 143 (343)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCC--SCEEEEEECS--STTEEEEEETTSCEE
T ss_pred ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC--CcEEEEEECC--CCCEEEEEcCCCEEE
Confidence 456789999999999999999999999999999999998887776655554 4688899998 468899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+||+..... ........|. ..+....+... ... .....+.+
T Consensus 144 ~wd~~~~~~-----~~~~~~~~~~-------------------~~v~~~~~~~~------~~~---------~~~~~~~~ 184 (343)
T 2xzm_R 144 LWNILGECK-----FSSAEKENHS-------------------DWVSCVRYSPI------MKS---------ANKVQPFA 184 (343)
T ss_dssp EEESSSCEE-----EECCTTTSCS-------------------SCEEEEEECCC------CCS---------CSCCCSSC
T ss_pred EEeccCCce-----eeeecccCCC-------------------ceeeeeeeccc------ccc---------ccccCCCC
Confidence 999863210 0000000000 00000000000 000 00011112
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
. ++++++.|+.|++||.. .+....+..+ ...+.++ .|.|+. ..+++|+.|++|++||++.
T Consensus 185 -~-~l~s~~~d~~i~iwd~~-~~~~~~~~~h----------~~~v~~~---~~s~~g----~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 185 -P-YFASVGWDGRLKVWNTN-FQIRYTFKAH----------ESNVNHL---SISPNG----KYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp -C-EEEEEETTSEEEEEETT-TEEEEEEECC----------SSCEEEE---EECTTS----SEEEEEETTCEEEEEESSC
T ss_pred -C-EEEEEcCCCEEEEEcCC-CceeEEEcCc----------cccceEE---EECCCC----CEEEEEcCCCeEEEEECCC
Confidence 2 34556778999999943 3333333321 1122222 355542 3688999999999999965
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee---------eecCCCCeEEEEECCCCc
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE---------INLERPGISGTSIRPDSK 320 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~---------~~~~~~~i~~~~~~p~~~ 320 (383)
...+...+. +...|.+++|++++.. ++++.|+.|++||+............ ...+...+.+++|+|+++
T Consensus 245 ~~~~~~~~~-~~~~v~~v~~sp~~~~-la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~ 322 (343)
T 2xzm_R 245 LTYPQREFD-AGSTINQIAFNPKLQW-VAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK 322 (343)
T ss_dssp CSSCSEEEE-CSSCEEEEEECSSSCE-EEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC
T ss_pred Ccccceeec-CCCcEEEEEECCCCCE-EEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC
Confidence 444444332 4567999999998765 45667889999999765432211111 113456799999999999
Q ss_pred EEEEEeCCCcEEEEEcCCC
Q 016769 321 IAATAGWDRRVRIYNYRKG 339 (383)
Q Consensus 321 ~l~s~~~dg~i~iwd~~~~ 339 (383)
+|++|+.||+|++|+++++
T Consensus 323 ~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 323 KLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CEEEEETTSEEEEEEEEEE
T ss_pred eEEEecCCceEEEEEEEcc
Confidence 9999999999999998654
No 77
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=3.7e-28 Score=226.67 Aligned_cols=250 Identities=23% Similarity=0.344 Sum_probs=176.0
Q ss_pred CceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCC
Q 016769 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (383)
Q Consensus 19 ~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~ 98 (383)
..|++++|+|++++|++|+.|++|+|||+.+++.+..+..|. ..+.++++.+ ++..|++++.|++|++||+++++.
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~--~~v~~~~~~p--~~~~l~s~s~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHE--QDIYSLDYFP--SGDKLVSGSGDRTVRIWDLRTGQC 199 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCC--CCEEEEEEcC--CCCEEEEecCCCcEEEEECCCCee
Confidence 359999999999999999999999999998877766655554 4588899988 468899999999999999987632
Q ss_pred CCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccC
Q 016769 99 SSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGE 178 (383)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 178 (383)
. ..+.. .. . .....+.+...++ +++|+
T Consensus 200 ~----~~~~~-------------~~----------~-------------------------v~~~~~~~~~~~~-l~~~s 226 (393)
T 1erj_A 200 S----LTLSI-------------ED----------G-------------------------VTTVAVSPGDGKY-IAAGS 226 (393)
T ss_dssp E----EEEEC-------------SS----------C-------------------------EEEEEECSTTCCE-EEEEE
T ss_pred E----EEEEc-------------CC----------C-------------------------cEEEEEECCCCCE-EEEEc
Confidence 1 00000 00 0 0001122322233 45567
Q ss_pred CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC-------
Q 016769 179 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG------- 251 (383)
Q Consensus 179 ~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~------- 251 (383)
.|++|++||+++++.+..+...... ...+...+.++ .|.++. ..+++|+.|++|++||+++..
T Consensus 227 ~d~~v~iwd~~~~~~~~~~~~~~~~---~~~h~~~v~~v---~~~~~g----~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 227 LDRAVRVWDSETGFLVERLDSENES---GTGHKDSVYSV---VFTRDG----QSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TTSCEEEEETTTCCEEEEEC---------CCCSSCEEEE---EECTTS----SEEEEEETTSEEEEEEC-----------
T ss_pred CCCcEEEEECCCCcEEEeecccccC---CCCCCCCEEEE---EECCCC----CEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 7899999999998877665421100 01112222222 344432 368899999999999997532
Q ss_pred ----CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC------CCcE
Q 016769 252 ----IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP------DSKI 321 (383)
Q Consensus 252 ----~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p------~~~~ 321 (383)
.+...+.+|...|.++.+++++..+++++.|+.|++||+.... .. ..+..|...|.+++|+| ++++
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~--~~--~~l~~h~~~v~~v~~~~~~~~~p~~~~ 372 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN--PL--LMLQGHRNSVISVAVANGSSLGPEYNV 372 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC--EE--EEEECCSSCEEEEEECSSCTTCTTCEE
T ss_pred CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe--EE--EEECCCCCCEEEEEecCCcCcCCCCCE
Confidence 2234567899999999999999999999999999999987543 22 23456778899999875 6889
Q ss_pred EEEEeCCCcEEEEEcCCC
Q 016769 322 AATAGWDRRVRIYNYRKG 339 (383)
Q Consensus 322 l~s~~~dg~i~iwd~~~~ 339 (383)
|++|+.||+|++|++...
T Consensus 373 l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 373 FATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEEEETTSEEEEEEEEEC
T ss_pred EEEECCCCcEEECccccc
Confidence 999999999999998543
No 78
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=1.1e-27 Score=220.40 Aligned_cols=241 Identities=19% Similarity=0.357 Sum_probs=175.1
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+.+++|++ ++.+|+|++.|++|++||..++... ..+. .+..
T Consensus 65 ~~V~~~~~s~--d~~~l~s~s~Dg~v~vWd~~~~~~~----~~~~-------------~~~~------------------ 107 (354)
T 2pbi_B 65 NKVLCMDWCK--DKRRIVSSSQDGKVIVWDSFTTNKE----HAVT-------------MPCT------------------ 107 (354)
T ss_dssp SCEEEEEECT--TSSEEEEEETTSEEEEEETTTCCEE----EEEE-------------CSSS------------------
T ss_pred CeEEEEEECC--CCCEEEEEeCCCeEEEEECCCCCcc----eEEe-------------cCCC------------------
Confidence 4588999998 4689999999999999998765310 0000 0000
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCe------eeEeccCcCCCCCCcCCCCCcee
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAER------CTRLHQNSCGGSPNFSSKGRGMC 216 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~------~~~~~~~~~~~s~~~~~~~~~~~ 216 (383)
......+++++. .+++|+.|+.+++|++..... ...+.. +.....+
T Consensus 108 ----------------~v~~~~~sp~g~--~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~----------h~~~v~~ 159 (354)
T 2pbi_B 108 ----------------WVMACAYAPSGC--AIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM----------HTNYLSA 159 (354)
T ss_dssp ----------------CCCEEEECTTSS--EEEEESTTSEEEEEECCCCTTCCSGGGCEEEEE----------CSSCEEE
T ss_pred ----------------CEEEEEECCCCC--EEEEeeCCCCEEEEEEeccccccccccceeeec----------cCCcEEE
Confidence 000112334443 345567789999999865421 111111 1111112
Q ss_pred eEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeC--CCCceEEEEcCCcEEEEEccCCC
Q 016769 217 MAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE--SCNGGISGGADQKIVLYNLDHST 294 (383)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~~s~~~d~~i~~wdl~~~~ 294 (383)
..|.+.. ..+++++.|++|++||+++. ..+..+.+|...|.++.+.+ ++..+++|+.|+.|++||++...
T Consensus 160 ---~~~~~~~----~~l~t~s~D~~v~lwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 160 ---CSFTNSD----MQILTASGDGTCALWDVESG-QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp ---EEECSSS----SEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred ---EEEeCCC----CEEEEEeCCCcEEEEeCCCC-eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 2344432 25889999999999999874 45778889999999999976 45689999999999999997643
Q ss_pred CeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccc--ccceeEEEEeCCCCEEEEEeCCCc
Q 016769 295 GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HATCNAVSFSSDCKLMASASEDST 372 (383)
Q Consensus 295 ~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h--~~~v~~v~~spd~~~las~s~d~~ 372 (383)
+. ..+..+...|++++|+|++++|++++.|++|++||++.++.+..+..+ ...+.+++|+|++++|++|+.|+.
T Consensus 232 --~~--~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~ 307 (354)
T 2pbi_B 232 --CV--QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT 307 (354)
T ss_dssp --EE--EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred --EE--EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc
Confidence 22 234556778999999999999999999999999999988877766543 347899999999999999999999
Q ss_pred EEEEeCCC
Q 016769 373 VALWELYP 380 (383)
Q Consensus 373 i~~w~~~~ 380 (383)
|++||+..
T Consensus 308 i~vwd~~~ 315 (354)
T 2pbi_B 308 INVWDVLK 315 (354)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 99999853
No 79
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=9.6e-28 Score=226.53 Aligned_cols=258 Identities=20% Similarity=0.299 Sum_probs=190.5
Q ss_pred eeeeecCCceeeEEEeCC-CCeEEEecCCCeEEEeeCcc----------cccccccccccccceeeeeeecCCCCcceeE
Q 016769 12 AVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQ----------HRTVSSSWVHSAAHGIVSVATGPSIGLNKVI 80 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~-~~~L~sgs~D~~v~vW~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (383)
..+.+|.+.|++++|+|+ +.+|++|+.||.|++|++.. .+.+..+..|. ..+.++++.+. +...|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~~~~-~~~~l~ 198 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQ--KEGYGLSWNPN-LNGYLL 198 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCS--SCCCCEEECTT-STTEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCC--CCeEEEEeCCC-CCCeEE
Confidence 467899999999999997 68999999999999999876 23333333333 45778888884 223899
Q ss_pred ecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccc
Q 016769 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFE 160 (383)
Q Consensus 81 s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
+++.|++|++||+.++..... .+ . .
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~---~~----------~----~-------------------------------------- 223 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHR---VI----------D----A-------------------------------------- 223 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGG---EE----------E----C--------------------------------------
T ss_pred EEeCCCeEEEEeCCCCCCCCc---ee----------c----c--------------------------------------
Confidence 999999999999976421000 00 0 0
Q ss_pred eecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC
Q 016769 161 IIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 240 (383)
Q Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg 240 (383)
.... .+ ..+.| .++ .+.|.. ...+++++.|+
T Consensus 224 ----------~~~~-~~-h~~~v-------------------------------~~v---~~~p~~---~~~l~s~~~dg 254 (430)
T 2xyi_A 224 ----------KNIF-TG-HTAVV-------------------------------EDV---AWHLLH---ESLFGSVADDQ 254 (430)
T ss_dssp ----------SEEE-CC-CSSCE-------------------------------EEE---EECSSC---TTEEEEEETTS
T ss_pred ----------ceee-cC-CCCCE-------------------------------eee---EEeCCC---CCEEEEEeCCC
Confidence 0000 00 00000 000 122211 12477899999
Q ss_pred cEEEEeCCCCC--CceeeeeccccCeEEEEEeCCCCc-eEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC
Q 016769 241 SILVWDIRNPG--IPLTAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 241 ~i~~wdl~~~~--~~~~~~~~h~~~v~~~~~~~~~~~-~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p 317 (383)
.|++||+++.. .++..+..|..+|.++.|++.+.. +++|+.|+.|++||++...... ..+..+...+.+++|+|
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~---~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL---HSFESHKDEIFQVQWSP 331 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCS---EEEECCSSCEEEEEECS
T ss_pred eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCe---EEeecCCCCEEEEEECC
Confidence 99999998753 456667789999999999998874 7899999999999998633211 22344667899999999
Q ss_pred CCc-EEEEEeCCCcEEEEEcCC--------------CceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 318 DSK-IAATAGWDRRVRIYNYRK--------------GSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 318 ~~~-~l~s~~~dg~i~iwd~~~--------------~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
+++ +|++++.|++|++||+.. .+.+..+.+|...|.+++|+|+++ +|++++.|+.|++|++.
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 985 699999999999999976 366778889999999999999999 99999999999999974
No 80
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.8e-28 Score=221.07 Aligned_cols=143 Identities=10% Similarity=0.061 Sum_probs=113.2
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeee-eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec-CCCC
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAM-KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL-ERPG 309 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~-~~~~ 309 (383)
.+++|+.||+|++||+++... +... ..|...+.+++|++++..+++|+.|+.|++||++...... ..+.. |...
T Consensus 141 ~l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~---~~~~~~h~~~ 216 (343)
T 3lrv_A 141 YFIWADNRGTIGFQSYEDDSQ-YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS---SRFPVDEEAK 216 (343)
T ss_dssp EEEEEETTCCEEEEESSSSCE-EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC---EECCCCTTSC
T ss_pred EEEEEeCCCcEEEEECCCCcE-EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc---cEEeccCCCC
Confidence 588899999999999987543 4333 3455689999999999999999999999999998654320 12333 6688
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecc---ccccee--EEEEeCCCCEEEEEeC-CCcEEEEeCC
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY---HHATCN--AVSFSSDCKLMASASE-DSTVALWELY 379 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---h~~~v~--~v~~spd~~~las~s~-d~~i~~w~~~ 379 (383)
|.+++|+|++++|++++ |++|++||+++++.+..+.. |...+. +++|+|+|++|++++. |+.|++|++.
T Consensus 217 v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 217 IKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp EEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 99999999999999999 55999999998876554443 445554 5999999999999999 9999999884
No 81
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=4e-27 Score=239.32 Aligned_cols=295 Identities=17% Similarity=0.207 Sum_probs=209.2
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
+.+.++.+|.+.|++++|+|++++|++|+.||.|+|||..+++.+..+..|. ..+.++++++ ++..+++++.|++|
T Consensus 46 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~--~~v~~~~~s~--~~~~l~~~~~dg~i 121 (814)
T 3mkq_A 46 VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP--DYIRSIAVHP--TKPYVLSGSDDLTV 121 (814)
T ss_dssp EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS--SCEEEEEECS--SSSEEEEEETTSEE
T ss_pred ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCC--CCEEEEEEeC--CCCEEEEEcCCCEE
Confidence 4567889999999999999999999999999999999998887776654443 4588899998 46789999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||++++... ...+..+.. .+. ...+.+.
T Consensus 122 ~vw~~~~~~~~---~~~~~~~~~----------------------~v~-------------------------~~~~~p~ 151 (814)
T 3mkq_A 122 KLWNWENNWAL---EQTFEGHEH----------------------FVM-------------------------CVAFNPK 151 (814)
T ss_dssp EEEEGGGTSEE---EEEEECCSS----------------------CEE-------------------------EEEEETT
T ss_pred EEEECCCCceE---EEEEcCCCC----------------------cEE-------------------------EEEEEcC
Confidence 99999765210 000000000 000 0011221
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 248 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~ 248 (383)
+.. ++++++.+++|++||++++.....+.... .....++ .+.|.. +...+++++.||.|++||++
T Consensus 152 ~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~---------~~~v~~~---~~~~~~--~~~~l~~~~~dg~i~~~d~~ 216 (814)
T 3mkq_A 152 DPS-TFASGCLDRTVKVWSLGQSTPNFTLTTGQ---------ERGVNYV---DYYPLP--DKPYMITASDDLTIKIWDYQ 216 (814)
T ss_dssp EEE-EEEEEETTSEEEEEETTCSSCSEEEECCC---------TTCCCEE---EECCST--TCCEEEEECTTSEEEEEETT
T ss_pred CCC-EEEEEeCCCeEEEEECCCCcceeEEecCC---------CCCEEEE---EEEECC--CCCEEEEEeCCCEEEEEECC
Confidence 122 34456678999999998877655554211 0111122 244421 12368899999999999998
Q ss_pred CCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCc--EEEEEe
Q 016769 249 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK--IAATAG 326 (383)
Q Consensus 249 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~--~l~s~~ 326 (383)
+. .....+..|..+|.++.|++++..+++++.|+.|++||+..... ......+...+.+++|+|+++ ++++ +
T Consensus 217 ~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~-~ 290 (814)
T 3mkq_A 217 TK-SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV----EKTLNVGLERSWCIATHPTGRKNYIAS-G 290 (814)
T ss_dssp TT-EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSE----EEEECCSSSSEEEEEECTTCGGGEEEE-E
T ss_pred CC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE----EEEeecCCCcEEEEEEccCCCceEEEE-E
Confidence 74 45677888999999999999999999999999999999875432 123344557899999999987 4554 4
Q ss_pred CCCcEEEEEcCCCce----------EE---------------------------------EecccccceeEEEEeCCCCE
Q 016769 327 WDRRVRIYNYRKGSA----------LA---------------------------------ILKYHHATCNAVSFSSDCKL 363 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~----------~~---------------------------------~~~~h~~~v~~v~~spd~~~ 363 (383)
.|+.+.+|++..... +. .+..|...+.+++|+|||++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 370 (814)
T 3mkq_A 291 FDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRF 370 (814)
T ss_dssp ETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSE
T ss_pred eCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCE
Confidence 577788898754321 11 11234456789999999999
Q ss_pred EEEEeCCCcEEEEeCC
Q 016769 364 MASASEDSTVALWELY 379 (383)
Q Consensus 364 las~s~d~~i~~w~~~ 379 (383)
|++++ |+.+.+|++.
T Consensus 371 la~~~-~~~~~i~~~~ 385 (814)
T 3mkq_A 371 VTVVG-DGEYVIYTAL 385 (814)
T ss_dssp EEEEE-TTEEEEEETT
T ss_pred EEEec-CCEEEEEECc
Confidence 99988 8899999874
No 82
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=4.1e-27 Score=214.18 Aligned_cols=257 Identities=20% Similarity=0.276 Sum_probs=175.8
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
+..++++|.+.|++++|+|++++|++|+.|+.|++|+............+ ........+.+ .+..+++++.|+.++
T Consensus 78 ~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~l~s~s~d~~~~ 153 (340)
T 4aow_A 78 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGH--TKDVLSVAFSS--DNRQIVSGSRDKTIK 153 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC--SSCEEEEEECT--TSSCEEEEETTSCEE
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCC--CCceeEEEEee--cCccceeecCCCeEE
Confidence 56789999999999999999999999999999999998776554433222 22344555555 357899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+||+..... ... ....| ... .....+...+
T Consensus 154 ~~d~~~~~~-----~~~-~~~~~-------------------~~~-------------------------v~~~~~~~~~ 183 (340)
T 4aow_A 154 LWNTLGVCK-----YTV-QDESH-------------------SEW-------------------------VSCVRFSPNS 183 (340)
T ss_dssp EECTTSCEE-----EEE-CSSSC-------------------SSC-------------------------EEEEEECSCS
T ss_pred EEEeCCCce-----EEE-Eeccc-------------------cCc-------------------------ccceEEccCC
Confidence 999865321 000 00000 000 0001112222
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
...++++++.|+.|++||+++++.+..+..+ ...+.++ .|.|+. ..+++|+.|++|++||+++
T Consensus 184 ~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h----------~~~v~~~---~~s~~~----~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 184 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGH----------TGYLNTV---TVSPDG----SLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp SSCEEEEEETTSCEEEEETTTTEEEEEECCC----------SSCEEEE---EECTTS----SEEEEEETTCEEEEEETTT
T ss_pred CCcEEEEEcCCCEEEEEECCCCceeeEecCC----------CCcEEEE---EECCCC----CEEEEEeCCCeEEEEEecc
Confidence 2335566777899999999998877666431 1222222 244432 3688999999999999987
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee-----eeecCCCCeEEEEECCCCcEEEE
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK-----EINLERPGISGTSIRPDSKIAAT 324 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~-----~~~~~~~~i~~~~~~p~~~~l~s 324 (383)
. .++..+.. ...+.++.+++++ .+++++.|+.|++||++.......+.. ....+...|++++|+|++++|++
T Consensus 247 ~-~~~~~~~~-~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 323 (340)
T 4aow_A 247 G-KHLYTLDG-GDIINALCFSPNR-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA 323 (340)
T ss_dssp T-EEEEEEEC-SSCEEEEEECSSS-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEE
T ss_pred C-ceeeeecC-CceEEeeecCCCC-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEE
Confidence 4 34555553 4689999998875 567788899999999875432221111 12345678999999999999999
Q ss_pred EeCCCcEEEEEcCCCc
Q 016769 325 AGWDRRVRIYNYRKGS 340 (383)
Q Consensus 325 ~~~dg~i~iwd~~~~~ 340 (383)
|+.||+|++||+.+|+
T Consensus 324 gs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 324 GYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EETTSCEEEEEEEC--
T ss_pred EeCCCEEEEEeCCCcC
Confidence 9999999999999876
No 83
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=1.4e-26 Score=208.86 Aligned_cols=243 Identities=21% Similarity=0.339 Sum_probs=178.2
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+.++++++ ++++|++++.|++|++|++.+++... .+..+. ..+
T Consensus 24 ~~v~~~~~s~--~~~~l~s~~~dg~i~iw~~~~~~~~~----~~~~h~----------------------~~v------- 68 (312)
T 4ery_A 24 KAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGKFEK----TISGHK----------------------LGI------- 68 (312)
T ss_dssp SCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCEEE----EECCCS----------------------SCE-------
T ss_pred CcEEEEEECC--CCCEEEEeeCCCeEEEEeCCCcccch----hhccCC----------------------Cce-------
Confidence 4688899998 46889999999999999997663210 000000 000
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEee
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAY 222 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 222 (383)
....+.+++. + +++++.|+.|++||+++++.+..+..+ ...+.++ .+
T Consensus 69 ------------------~~~~~~~~~~-~-l~s~~~d~~i~vwd~~~~~~~~~~~~~----------~~~v~~~---~~ 115 (312)
T 4ery_A 69 ------------------SDVAWSSDSN-L-LVSASDDKTLKIWDVSSGKCLKTLKGH----------SNYVFCC---NF 115 (312)
T ss_dssp ------------------EEEEECTTSS-E-EEEEETTSEEEEEETTTCCEEEEEECC----------SSCEEEE---EE
T ss_pred ------------------EEEEEcCCCC-E-EEEECCCCEEEEEECCCCcEEEEEcCC----------CCCEEEE---EE
Confidence 0011233443 3 445667899999999998877766532 1222232 24
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee
Q 016769 223 LPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE 302 (383)
Q Consensus 223 ~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~ 302 (383)
.|.. ..+++|+.|++|++||+++. ..+..+..|..+|.++.|++++..+++++.|+.|++||+....... ..
T Consensus 116 ~~~~----~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~---~~ 187 (312)
T 4ery_A 116 NPQS----NLIVSGSFDESVRIWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK---TL 187 (312)
T ss_dssp CSSS----SEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE---EE
T ss_pred cCCC----CEEEEEeCCCcEEEEECCCC-EEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceee---EE
Confidence 4432 36889999999999999874 4567788899999999999999999999999999999997543211 12
Q ss_pred eecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeE--EEEe-CCCCEEEEEeCCCcEEEEeCC
Q 016769 303 INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNA--VSFS-SDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 303 ~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~--v~~s-pd~~~las~s~d~~i~~w~~~ 379 (383)
...+...+..++|+|++++|++++.|+.|++||+.+++.+..+.+|...+.+ ..|+ +++++|++|+.|+.|++||+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 188 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 2234457899999999999999999999999999999999999888765432 3444 678899999999999999986
Q ss_pred CC
Q 016769 380 PP 381 (383)
Q Consensus 380 ~~ 381 (383)
..
T Consensus 268 ~~ 269 (312)
T 4ery_A 268 TK 269 (312)
T ss_dssp TC
T ss_pred Cc
Confidence 43
No 84
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=4.4e-27 Score=209.58 Aligned_cols=182 Identities=11% Similarity=0.047 Sum_probs=123.8
Q ss_pred CCcceEEEEec-CCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceee
Q 016769 178 EQLSEVEIWDL-NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 256 (383)
Q Consensus 178 ~~~~~i~~Wdl-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~ 256 (383)
..++.|++|++ .+++.+..+.. +++....++ |.+.. .....+++|+.|++|+|||++++ ..+.+
T Consensus 154 g~d~~V~~~~~s~dG~~~~s~~~--------~~~~v~~l~-----fs~~~-g~~~~LaSgS~D~TIkIWDl~TG-k~l~t 218 (356)
T 2w18_A 154 LSDQQVEVMTFAEDGGGKENQFL--------MPPEETILT-----FAEVQ-GMQEALLGTTIMNNIVIWNLKTG-QLLKK 218 (356)
T ss_dssp STTCEEEEEEECTTSCEEEEEEE--------CCCSSCEEE-----EEEEE-TSTTEEEEEETTSEEEEEETTTC-CEEEE
T ss_pred CCCCcEEEEEECCCCceeeeecc--------CCCceeeEE-----eeccC-CCCceEEEecCCCcEEEEECCCC-cEEEE
Confidence 35789999999 44665554432 122222222 32210 11236889999999999999984 45677
Q ss_pred eeccc---cCeEEEEEeCCCCce------------EEEEcCCcEEEEEccCCCCeeEEeeee---ecCCCCeEEEEECCC
Q 016769 257 MKVHL---EPVLCLSIDESCNGG------------ISGGADQKIVLYNLDHSTGSCVIKKEI---NLERPGISGTSIRPD 318 (383)
Q Consensus 257 ~~~h~---~~v~~~~~~~~~~~~------------~s~~~d~~i~~wdl~~~~~~~~~~~~~---~~~~~~i~~~~~~p~ 318 (383)
++.|. ..+.+++|+|++..+ ++|+.|++|++||.+.. ........ ..+...+.+. +.+
T Consensus 219 L~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg--k~l~v~~~~~p~Gh~~~~lsg--~~s 294 (356)
T 2w18_A 219 MHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT--LSVGVMLYCLPPGQAGRFLEG--DVK 294 (356)
T ss_dssp EECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT--EEEEEEEECCCTTCCCCEEEE--EEE
T ss_pred EcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC--EEEEEEEeeccCCCcceeEcc--ccC
Confidence 77543 467778898888765 56888999999998643 33221111 1222223222 233
Q ss_pred CcEEEEEeCCCcEEEEEcCCCceEEEeccccccee-EEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 319 SKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN-AVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 319 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+.++|+++.|++|+|||+.+++.+.++.+|...+. +++|||||++||||+.|++|||||+
T Consensus 295 g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 295 DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 67899999999999999999999999999988765 5899999999999999999999996
No 85
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.2e-28 Score=227.13 Aligned_cols=272 Identities=11% Similarity=0.097 Sum_probs=186.3
Q ss_pred eeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeec
Q 016769 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (383)
Q Consensus 14 l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~ 93 (383)
-++-...|.+|+|+|||++|||+|.|++|+ |....+++ ..|. ..+..++|+|. + .|+++++|+.
T Consensus 11 ~~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~--~~v~~V~FsPd--g-------~~~~~~~~~~ 74 (588)
T 2j04_A 11 RKEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNS--KNLFHVKEFPL--E-------FENKLDFELA 74 (588)
T ss_dssp SCCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBG--GGTEEEEEECC--C-------CCCTTTTSCC
T ss_pred HhHhhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCC--ccEEEEEECCC--C-------CcceEEEEeC
Confidence 346678999999999999999999999999 75444433 3343 46888999983 2 4555555543
Q ss_pred CCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCcee
Q 016769 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYM 173 (383)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (383)
+...... +.. . .......++++|. .
T Consensus 75 ~~~~~~~-----~~~-----------------------~-------------------------~~V~~vawSPdG~-~- 99 (588)
T 2j04_A 75 QQNGLLN-----SQP-----------------------V-------------------------CYPRVCKPSPIDD-W- 99 (588)
T ss_dssp CSSCSST-----TSC-----------------------S-------------------------CCEEEEEECSSSS-C-
T ss_pred CCceEee-----cCC-----------------------C-------------------------CcEEEEEECCCCC-E-
Confidence 3211100 000 0 0011123456665 3
Q ss_pred eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC-
Q 016769 174 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI- 252 (383)
Q Consensus 174 ~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~- 252 (383)
+++++.+++|++||.+. ++..+. +.. .-....+.+ ..|.|++ ..+++|+.||+|++||+.....
T Consensus 100 LAs~s~dg~V~iwd~~~--~l~~l~-~~~-----~~~~~sv~s---vafSPDG----~~LAsgs~DGtVkIWd~~~~~l~ 164 (588)
T 2j04_A 100 MAVLSNNGNVSVFKDNK--MLTNLD-SKG-----NLSSRTYHC---FEWNPIE----SSIVVGNEDGELQFFSIRKNSEN 164 (588)
T ss_dssp EEEEETTSCEEEEETTE--EEEECC-CSS-----CSTTTCEEE---EEECSSS----SCEEEEETTSEEEEEECCCCTTT
T ss_pred EEEEeCCCcEEEEeCCc--eeeecc-CCC-----ccccccEEE---EEEcCCC----CEEEEEcCCCEEEEEECCCCccc
Confidence 34556789999999544 344333 110 000011222 2466653 3589999999999999987532
Q ss_pred -----ceeee----eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeee-ecCCCCeEEEEECCCCcEE
Q 016769 253 -----PLTAM----KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI-NLERPGISGTSIRPDSKIA 322 (383)
Q Consensus 253 -----~~~~~----~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~-~~~~~~i~~~~~~p~~~~l 322 (383)
.+..+ .+|..+|.+++|+|++ +++++.|+++++||++........ ..+ ..+...|.+++|+ ++++
T Consensus 165 ~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~-~tL~~~h~~~V~svaFs--g~~L 239 (588)
T 2j04_A 165 TPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVS-RMIQNASRRKITDLKIV--DYKV 239 (588)
T ss_dssp CCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCE-EEEECCCSSCCCCEEEE--TTEE
T ss_pred cccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccce-eeecccccCcEEEEEEE--CCEE
Confidence 24555 5677899999999998 889999999999999765421100 112 2455789999999 5889
Q ss_pred EEEeCCCcEEEEEcCCCceEEEecccccceeEEEE--eCCCCEEEEEeCCCcEEEEeC
Q 016769 323 ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSF--SSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 323 ~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~--spd~~~las~s~d~~i~~w~~ 378 (383)
|+++ +++|++||+..++......+|...|..++| +||++.|+++++||+ ++|.+
T Consensus 240 ASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 240 VLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp EEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred EEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 9887 799999999887764434379999999999 999999999999999 99987
No 86
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=2.5e-27 Score=216.97 Aligned_cols=264 Identities=19% Similarity=0.260 Sum_probs=175.9
Q ss_pred eeecCCceeeEEEeCC---CCeEEEecCCCeEEEeeCcccc-cccccccccccceeeeee------ecCCCCcceeEecc
Q 016769 14 LRGHRASVTDVCFHQT---KPILFAGTTGGELRIWDTVQHR-TVSSSWVHSAAHGIVSVA------TGPSIGLNKVISQG 83 (383)
Q Consensus 14 l~gH~~~V~~v~f~~~---~~~L~sgs~D~~v~vW~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~s~~ 83 (383)
..+|.+.|++++|+|+ +++|++|+.|+.|++||+.+++ .+..+..|. ..+.++. +++ +++.|++++
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~s~--~~~~l~~~~ 136 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHK--EIINAIDGIGGLGIGE--GAPEIVTGS 136 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCS--SCEEEEEEESGGGCC---CCCEEEEEE
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecc--cceEEEeeccccccCC--CccEEEEEe
Confidence 3489999999999998 6999999999999999998776 555544443 3456664 344 467899999
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.|++|++||+.++... ...+.....+ ....+.. ..+..
T Consensus 137 ~d~~i~vwd~~~~~~~---~~~~~~~~~~------------------~~~~v~~---------------------~~~~~ 174 (357)
T 3i2n_A 137 RDGTVKVWDPRQKDDP---VANMEPVQGE------------------NKRDCWT---------------------VAFGN 174 (357)
T ss_dssp TTSCEEEECTTSCSSC---SEEECCCTTS------------------CCCCEEE---------------------EEEEC
T ss_pred CCCeEEEEeCCCCCCc---ceeccccCCC------------------CCCceEE---------------------EEEEe
Confidence 9999999999876411 1111000000 0000000 00001
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
.+.+++. + +++++.++.|++||+++++....... .....++ .+.|... ....+++|+.||.|+
T Consensus 175 ~~~~~~~-~-l~~~~~d~~i~i~d~~~~~~~~~~~~-----------~~~v~~~---~~~~~~~-~~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 175 AYNQEER-V-VCAGYDNGDIKLFDLRNMALRWETNI-----------KNGVCSL---EFDRKDI-SMNKLVATSLEGKFH 237 (357)
T ss_dssp CCC-CCC-E-EEEEETTSEEEEEETTTTEEEEEEEC-----------SSCEEEE---EESCSSS-SCCEEEEEESTTEEE
T ss_pred ccCCCCC-E-EEEEccCCeEEEEECccCceeeecCC-----------CCceEEE---EcCCCCC-CCCEEEEECCCCeEE
Confidence 1223333 3 44556689999999999876443321 1122222 2444110 123588899999999
Q ss_pred EEeCCCCCCceee-----eeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCee---------------EEeee
Q 016769 244 VWDIRNPGIPLTA-----MKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSC---------------VIKKE 302 (383)
Q Consensus 244 ~wdl~~~~~~~~~-----~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~---------------~~~~~ 302 (383)
+||+++... ... +..|..+|.++.|++++. .+++++.|+.|++||++...... .....
T Consensus 238 i~d~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 316 (357)
T 3i2n_A 238 VFDMRTQHP-TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQN 316 (357)
T ss_dssp EEEEEEEET-TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEE
T ss_pred EEeCcCCCc-ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeec
Confidence 999976332 222 348999999999999888 78999999999999997543321 22234
Q ss_pred eecCCCCeEEEEECCCCcEEE-EEeCCCcEEEEEcCCCce
Q 016769 303 INLERPGISGTSIRPDSKIAA-TAGWDRRVRIYNYRKGSA 341 (383)
Q Consensus 303 ~~~~~~~i~~~~~~p~~~~l~-s~~~dg~i~iwd~~~~~~ 341 (383)
...+...|.+++|+|++++|+ +++.|++|++||+.+.+.
T Consensus 317 ~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 317 VTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred cccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 556778899999999999988 899999999999987653
No 87
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=5.2e-27 Score=234.75 Aligned_cols=256 Identities=18% Similarity=0.263 Sum_probs=175.3
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
+...+.+|...|++++|+|++++|+|||.|++|+|||+.++++...+..|. ..+.++++++ +++.|+|++.|++|+
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~--~~v~~~~~s~--~~~~l~s~s~D~~i~ 497 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHT--KDVLSVAFSL--DNRQIVSASRDRTIK 497 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEEEECT--TSSCEEEEETTSCEE
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCC--CCEEEEEEeC--CCCEEEEEeCCCEEE
Confidence 345789999999999999999999999999999999998887766655554 4588899998 468899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+||..... ... +..... .+.. ......+++++
T Consensus 498 iwd~~~~~-----~~~------------~~~~~~-------~h~~------------------------~v~~~~~~~~~ 529 (694)
T 3dm0_A 498 LWNTLGEC-----KYT------------ISEGGE-------GHRD------------------------WVSCVRFSPNT 529 (694)
T ss_dssp EECTTSCE-----EEE------------ECSSTT-------SCSS------------------------CEEEEEECSCS
T ss_pred EEECCCCc-----cee------------eccCCC-------CCCC------------------------cEEEEEEeCCC
Confidence 99975321 000 000000 0000 00001122333
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
...++++++.|++|++||+++.+....+..+ .+.+.++ .+.|+. ..+++|+.||+|++||+++
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h----------~~~v~~v---~~spdg----~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLSNCKLRSTLAGH----------TGYVSTV---AVSPDG----SLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp SSCEEEEEETTSCEEEEETTTCCEEEEECCC----------SSCEEEE---EECTTS----SEEEEEETTSBCEEEETTT
T ss_pred CcceEEEEeCCCeEEEEECCCCcEEEEEcCC----------CCCEEEE---EEeCCC----CEEEEEeCCCeEEEEECCC
Confidence 2234566778899999999998876666432 1222222 344432 3688999999999999987
Q ss_pred CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee---------------cCCCCeEEEE
Q 016769 250 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN---------------LERPGISGTS 314 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~---------------~~~~~i~~~~ 314 (383)
.. .+..+. +...+.++.|++++..+ +++.|+.|++||++.......+..... .+...+++++
T Consensus 593 ~~-~~~~~~-~~~~v~~~~~sp~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 669 (694)
T 3dm0_A 593 GK-KLYSLE-ANSVIHALCFSPNRYWL-CAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLN 669 (694)
T ss_dssp TE-EEECCB-CSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEE
T ss_pred Cc-eEEEec-CCCcEEEEEEcCCCcEE-EEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEE
Confidence 43 344444 34679999999987654 455677899999976432222111000 0111368899
Q ss_pred ECCCCcEEEEEeCCCcEEEEEcC
Q 016769 315 IRPDSKIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 315 ~~p~~~~l~s~~~dg~i~iwd~~ 337 (383)
|+|++++|++|+.||+|++||+.
T Consensus 670 ~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 670 WSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC-
T ss_pred EcCCCCEEEEEcCCCeEEEEecc
Confidence 99999999999999999999985
No 88
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.2e-28 Score=227.48 Aligned_cols=303 Identities=15% Similarity=0.178 Sum_probs=193.7
Q ss_pred CCCCCeeeeeecCCceeeE----------EEeCCCCeEEEecCCCeEEEeeCccccccccc-ccccccceeeeeeecCCC
Q 016769 6 PPPDPVAVLRGHRASVTDV----------CFHQTKPILFAGTTGGELRIWDTVQHRTVSSS-WVHSAAHGIVSVATGPSI 74 (383)
Q Consensus 6 ~~~~~~~~l~gH~~~V~~v----------~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 74 (383)
||-+...++..|..-+..+ .|+|+++.+++++ .|+. +++.+..+ ..|. ..+.++++++.
T Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~f~~~~~~~~~~~------~w~~-~g~~~~~~~~~h~--~~V~~~~~s~~- 74 (437)
T 3gre_A 5 HHHHGEGDVESIEKFLSTFKILPPLRDYKEFGPIQEIVRSPN------MGNL-RGKLIATLMENEP--NSITSSAVSPG- 74 (437)
T ss_dssp ---------CCCGGGTTCC-CCCCGGGCGGGCCCCCCCCCCC------GGGC-CCCEEEEECTTTT--SCEEEEEEECS-
T ss_pred ccccCCCChhHHHHHhccCCCCCChhchhhcCCccccccccc------cccc-cceEEeeeccCCC--CceEEEEECCC-
Confidence 4444445556665555544 3567777777765 4884 45555554 3333 46889999882
Q ss_pred CcceeEecccCCeEEEeecCC---CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCcccc
Q 016769 75 GLNKVISQGRDGTVKCWDIEN---GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCD 151 (383)
Q Consensus 75 ~~~~l~s~~~D~ti~~Wd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (383)
++..|++++.|++|++||+.+ +.... ...... + . ..
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~-h----------~------------~~----------------- 113 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVGEVYS-SSLTYD-C----------S------------ST----------------- 113 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTTCCCS-CSEEEE-C----------S------------SC-----------------
T ss_pred CCCEEEEecCCceEEEeECcccccCcccc-eeeecc-C----------C------------CC-----------------
Confidence 257899999999999999875 32100 000000 0 0 00
Q ss_pred ccccCCccceecccCCCCCceeeeccCCcceEEEEecC---CCCeeeEeccCcCCCCCCcC---CCCCceeeEEEeecCC
Q 016769 152 SKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLN---TAERCTRLHQNSCGGSPNFS---SKGRGMCMAVQAYLPS 225 (383)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~---~~~~~~~~~~~~~~~s~~~~---~~~~~~~~~~~~~~~~ 225 (383)
.....+.+++ .+ +++++.|++|++||++ +++.+..+... ......+. ......++... +.+
T Consensus 114 --------v~~~~~~~~~-~~-l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~-~~~- 180 (437)
T 3gre_A 114 --------VTQITMIPNF-DA-FAVSSKDGQIIVLKVNHYQQESEVKFLNCE-CIRKINLKNFGKNEYAVRMRAF-VNE- 180 (437)
T ss_dssp --------EEEEEECTTS-SE-EEEEETTSEEEEEEEEEEEETTEEEEEEEE-EEEEEEGGGGSSCCCEEEEEEE-ECS-
T ss_pred --------EEEEEEeCCC-CE-EEEEeCCCEEEEEEeccccCCceeeccccc-eeEEEEccCcccccCceEEEEE-EcC-
Confidence 0001122333 23 4456678999999995 44443322211 00001111 11222222211 112
Q ss_pred CCCCceEEEEEeCCCcEEEEeCCCCCCceeeeec--cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeee
Q 016769 226 KSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV--HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI 303 (383)
Q Consensus 226 ~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~ 303 (383)
+...+++|+.|+.|++||+++. .++..+.. |..+|.+++|++++..+++++.|+.|++||++.. .... .+
T Consensus 181 ---~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~--~~~~--~~ 252 (437)
T 3gre_A 181 ---EKSLLVALTNLSRVIIFDIRTL-ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN--VLIR--SW 252 (437)
T ss_dssp ---SCEEEEEEETTSEEEEEETTTC-CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT--EEEE--EE
T ss_pred ---CCCEEEEEeCCCeEEEEeCCCC-eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc--cEEE--EE
Confidence 2346889999999999999874 45667777 8899999999999999999999999999999753 2222 22
Q ss_pred e-cCCCCeEEEEE----CCCCcEEEEEeCCCcEEEEEcCCCceEEEecc--------------------------cccce
Q 016769 304 N-LERPGISGTSI----RPDSKIAATAGWDRRVRIYNYRKGSALAILKY--------------------------HHATC 352 (383)
Q Consensus 304 ~-~~~~~i~~~~~----~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------------------------h~~~v 352 (383)
. .+...|.++++ +|++++|++++.|++|++||+.+++.+..+.+ |...|
T Consensus 253 ~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 332 (437)
T 3gre_A 253 SFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNAL 332 (437)
T ss_dssp BCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGG
T ss_pred ecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCce
Confidence 2 34457899954 56788999999999999999999987776654 55668
Q ss_pred eEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 353 NAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 353 ~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
.+++|+ ++++|++|+.|+.|++||+..+
T Consensus 333 ~~l~~~-~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 333 STISVS-NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp CCEEEE-TTEEEEEEGGGTEEEEEETTCG
T ss_pred EEEEEC-CceEEEecCCCCeEEEEECCCc
Confidence 889999 7799999999999999998654
No 89
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=1.4e-26 Score=217.88 Aligned_cols=267 Identities=18% Similarity=0.230 Sum_probs=171.5
Q ss_pred eeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEee
Q 016769 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd 92 (383)
.+.+|.+.|++|+|+|+|++|++|+.|++|+|||+.+++++.....|. ..+.++++. +..+++++.|+++++||
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~--~~v~~~s~~----~~~l~sgs~d~~i~~~d 215 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHS--ARVGSLSWN----SYILSSGSRSGHIHHHD 215 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEEE----TTEEEEEETTSEEEEEE
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCC--CceEEEeeC----CCEEEEEeCCCceeEee
Confidence 345888999999999999999999999999999999888776665554 335555543 47899999999999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
....... ...+..+... .......+.+. +
T Consensus 216 ~~~~~~~---~~~~~~h~~~-----------------------------------------------~~~~~~~~~g~-~ 244 (420)
T 4gga_A 216 VRVAEHH---VATLSGHSQE-----------------------------------------------VCGLRWAPDGR-H 244 (420)
T ss_dssp TTSSSCE---EEEEECCSSC-----------------------------------------------EEEEEECTTSS-E
T ss_pred eccccee---eEEecccccc-----------------------------------------------eeeeeecCCCC-e
Confidence 8654210 0000000000 00011223332 3
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
+++++.|+.+++||+.+++........ .......+.++ .+.|.... ...+.+|+.|++|++||++++ .
T Consensus 245 -l~s~~~D~~v~i~~~~~~~~~~~~~~~------~~~~~~~V~~~---~~~p~~~~-~la~~~gs~D~~I~iwd~~t~-~ 312 (420)
T 4gga_A 245 -LASGGNDNLVNVWPSAPGEGGWVPLQT------FTQHQGAVKAV---AWCPWQSN-VLATGGGTSDRHIRIWNVCSG-A 312 (420)
T ss_dssp -EEEEETTSCEEEEESSCCSSCSCCSEE------ECCCSSCEEEE---EECTTCTT-EEEEEECTTTCEEEEEETTTT-E
T ss_pred -eeeeeccccceEEeeccccccceeeee------ecccCCceeee---eeCCCccc-EEEEEeecCCCEEEEEeCCcc-c
Confidence 445667899999999876532111000 00111122222 34443221 111224578999999999874 3
Q ss_pred ceeeeeccccCeEEEEEeCCCCceEEEE--cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCc
Q 016769 253 PLTAMKVHLEPVLCLSIDESCNGGISGG--ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRR 330 (383)
Q Consensus 253 ~~~~~~~h~~~v~~~~~~~~~~~~~s~~--~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~ 330 (383)
....+.. ...+.++.+.+.+..+++++ .|+.|++||+.... .. ..+..|...|.+++|+||+++|++|+.|++
T Consensus 313 ~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~--~v--~~l~gH~~~V~~l~~spdg~~l~S~s~D~t 387 (420)
T 4gga_A 313 CLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--KV--AELKGHTSRVLSLTMSPDGATVASAAADET 387 (420)
T ss_dssp EEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--EE--EEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred cceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc--EE--EEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 4455544 35788899999988887765 68999999997543 22 345567889999999999999999999999
Q ss_pred EEEEEcCCCceEEEeccccccee
Q 016769 331 VRIYNYRKGSALAILKYHHATCN 353 (383)
Q Consensus 331 i~iwd~~~~~~~~~~~~h~~~v~ 353 (383)
|++||+....+......+...+.
T Consensus 388 vriWdv~~~~~~~~~~~~~~~~~ 410 (420)
T 4gga_A 388 LRLWRCFELDPARRREREKASAA 410 (420)
T ss_dssp EEEECCSCSSCC-----------
T ss_pred EEEEECCCCCccchhhhccCCcc
Confidence 99999987666555544554443
No 90
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=2.2e-27 Score=221.85 Aligned_cols=253 Identities=15% Similarity=0.236 Sum_probs=180.6
Q ss_pred CCeeeeeecCCceeeEEEeC-CCCeEEEecCCCeEEEeeCcccc-------cccccccccccceeeeeeecCCCCcceeE
Q 016769 9 DPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHR-------TVSSSWVHSAAHGIVSVATGPSIGLNKVI 80 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~-~~~~L~sgs~D~~v~vW~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (383)
..+.++.+|.+.|++++|+| ++++|++|+.||+|+|||+.++. .+..+..|. ..+.++++.++ +.+.|+
T Consensus 72 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~p~-~~~~l~ 148 (402)
T 2aq5_A 72 KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT--KRVGIVAWHPT-AQNVLL 148 (402)
T ss_dssp TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS--SCEEEEEECSS-BTTEEE
T ss_pred CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC--CeEEEEEECcC-CCCEEE
Confidence 45667899999999999999 99999999999999999998763 333333333 46788899884 226889
Q ss_pred ecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccc
Q 016769 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFE 160 (383)
Q Consensus 81 s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
+++.|++|++||+++++... .+.
T Consensus 149 s~~~dg~i~iwd~~~~~~~~----------------~~~----------------------------------------- 171 (402)
T 2aq5_A 149 SAGCDNVILVWDVGTGAAVL----------------TLG----------------------------------------- 171 (402)
T ss_dssp EEETTSCEEEEETTTTEEEE----------------EEC-----------------------------------------
T ss_pred EEcCCCEEEEEECCCCCccE----------------EEe-----------------------------------------
Confidence 99999999999987652100 000
Q ss_pred eecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC
Q 016769 161 IIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 240 (383)
Q Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg 240 (383)
. .+ ..+.| .++ .+.|+. ..+++++.|+
T Consensus 172 ------~--------~~-~~~~v-------------------------------~~~---~~~~~~----~~l~~~~~d~ 198 (402)
T 2aq5_A 172 ------P--------DV-HPDTI-------------------------------YSV---DWSRDG----ALICTSCRDK 198 (402)
T ss_dssp ------T--------TT-CCSCE-------------------------------EEE---EECTTS----SCEEEEETTS
T ss_pred ------c--------CC-CCCce-------------------------------EEE---EECCCC----CEEEEEecCC
Confidence 0 00 00000 000 122211 1377888999
Q ss_pred cEEEEeCCCCCCceeee-eccccC-eEEEEEeCCCCceEEE---EcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEE
Q 016769 241 SILVWDIRNPGIPLTAM-KVHLEP-VLCLSIDESCNGGISG---GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSI 315 (383)
Q Consensus 241 ~i~~wdl~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~~~s~---~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~ 315 (383)
.|++||+++. ..+..+ ..|... +.++.|++++..+++| +.|+.|++||++........ ....+...+..++|
T Consensus 199 ~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 199 RVRVIEPRKG-TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSL--QELDTSSGVLLPFF 275 (402)
T ss_dssp EEEEEETTTT-EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEE--EECCCCSSCEEEEE
T ss_pred cEEEEeCCCC-ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceE--EeccCCCceeEEEE
Confidence 9999999874 345555 577665 8899999988877887 68999999999765432211 11123457999999
Q ss_pred CCCCcEEEE-EeCCCcEEEEEcCCCce-EEEecc--cccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 316 RPDSKIAAT-AGWDRRVRIYNYRKGSA-LAILKY--HHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 316 ~p~~~~l~s-~~~dg~i~iwd~~~~~~-~~~~~~--h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+|+++++++ ++.|++|++||+.+++. +..+.. |...|.+++|+|++.++++ .|+.+++|++.
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~ 341 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLH 341 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcC
Confidence 999999865 55799999999998874 444444 4589999999999998875 56799999985
No 91
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=9.1e-27 Score=216.74 Aligned_cols=271 Identities=16% Similarity=0.245 Sum_probs=185.6
Q ss_pred CCCeeeeeecCCceeeEEEeCC----C---CeEEEecCCCeEEEeeCccccc-----ccccccccc---cceeeeeeec-
Q 016769 8 PDPVAVLRGHRASVTDVCFHQT----K---PILFAGTTGGELRIWDTVQHRT-----VSSSWVHSA---AHGIVSVATG- 71 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~----~---~~L~sgs~D~~v~vW~~~~~~~-----~~~~~~~~~---~~~~~~~~~~- 71 (383)
..++..+.+|.+.|++++|+|+ + ++|++++.|+.|++|++.+++. ...+..|.. ...+.++.+.
T Consensus 52 ~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 131 (397)
T 1sq9_A 52 KDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 131 (397)
T ss_dssp GGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEEC
T ss_pred CCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEee
Confidence 3467889999999999999999 9 9999999999999999987765 444444421 2467888888
Q ss_pred ---CCCCcce-eEecccCCeEEEeecCC------CCCCCC-CeeeeecCceeeeeEEeeccccccccccCCCCccceecc
Q 016769 72 ---PSIGLNK-VISQGRDGTVKCWDIEN------GGLSSN-PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV 140 (383)
Q Consensus 72 ---~~~~~~~-l~s~~~D~ti~~Wd~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (383)
+ ++.. |++++.|++|++||+.+ +....- +...+.. . .... .
T Consensus 132 ~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~------~----------- 183 (397)
T 1sq9_A 132 SNDR--LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG--------T-VESP------M----------- 183 (397)
T ss_dssp CC------CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEE--------E-ECCS------S-----------
T ss_pred ccCC--CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeee--------e-eccc------c-----------
Confidence 6 4677 99999999999999976 322110 0000000 0 0000 0
Q ss_pred CcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCc-CCCCCceeeEE
Q 016769 141 GETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNF-SSKGRGMCMAV 219 (383)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~ 219 (383)
.... ......+.+++ ++++++.++.|++||+++++.+..+.... .+ .......++
T Consensus 184 ----------~~~~----~i~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~h~~~~~~i~~i-- 239 (397)
T 1sq9_A 184 ----------TPSQ----FATSVDISERG---LIATGFNNGTVQISELSTLRPLYNFESQH-----SMINNSNSIRSV-- 239 (397)
T ss_dssp ----------SSCC----CCCEEEECTTS---EEEEECTTSEEEEEETTTTEEEEEEECCC--------CCCCCEEEE--
T ss_pred ----------CCCC----CceEEEECCCc---eEEEEeCCCcEEEEECCCCceeEEEeccc-----cccccCCccceE--
Confidence 0000 00011233444 44556778999999999988776664300 00 001222222
Q ss_pred EeecCCCCCCceEEEEEeCC---CcEEEEeCCCCCCceeeeec-------------cccCeEEEEEeCCCCceEEEEcCC
Q 016769 220 QAYLPSKSQGFVNVLAGYED---GSILVWDIRNPGIPLTAMKV-------------HLEPVLCLSIDESCNGGISGGADQ 283 (383)
Q Consensus 220 ~~~~~~~~~~~~~~~sg~~d---g~i~~wdl~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~~~s~~~d~ 283 (383)
.+.|+. ..+++++.| +.|++||+++. .++..+.. |..+|.++.|++++..+++++.|+
T Consensus 240 -~~~~~~----~~l~~~~~d~~~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 313 (397)
T 1sq9_A 240 -KFSPQG----SLLAIAHDSNSFGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG 313 (397)
T ss_dssp -EECSST----TEEEEEEEETTEEEEEEEETTTC-CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS
T ss_pred -EECCCC----CEEEEEecCCCCceEEEEECCCC-cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence 244432 258889999 99999999874 45667777 999999999999999999999999
Q ss_pred cEEEEEccCCCCeeEEeeeee------cC---------------CCCeEEEEECCCC----------cEEEEEeCCCcEE
Q 016769 284 KIVLYNLDHSTGSCVIKKEIN------LE---------------RPGISGTSIRPDS----------KIAATAGWDRRVR 332 (383)
Q Consensus 284 ~i~~wdl~~~~~~~~~~~~~~------~~---------------~~~i~~~~~~p~~----------~~l~s~~~dg~i~ 332 (383)
.|++||+....... .+. .+ ...|.+++|+|++ ++|++++.||.|+
T Consensus 314 ~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 314 KLRFWDVKTKERIT----TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp EEEEEETTTTEEEE----EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred eEEEEEcCCCceeE----EEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEE
Confidence 99999997543222 222 33 6789999999998 7999999999999
Q ss_pred EEEcCCCc
Q 016769 333 IYNYRKGS 340 (383)
Q Consensus 333 iwd~~~~~ 340 (383)
+||+.+++
T Consensus 390 iw~~~~g~ 397 (397)
T 1sq9_A 390 WFREAGGK 397 (397)
T ss_dssp EEEEEC--
T ss_pred EEEcCCCC
Confidence 99998763
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.4e-25 Score=211.36 Aligned_cols=292 Identities=9% Similarity=0.027 Sum_probs=194.1
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc---ccccccccc----------------------------------
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSWVHS---------------------------------- 60 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~---~~~~~~~~~---------------------------------- 60 (383)
..+|.+|+|+|+|++|+++ .++.|++||+.+++ .+.....+.
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4688999999999966655 68899999988776 332221110
Q ss_pred ------------------ccceeeeeeecCCCCccee-EecccCCeEEEeecC--CCCCCCCCeeeeecCceeeeeEEee
Q 016769 61 ------------------AAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIE--NGGLSSNPSLTIKTNSYHFCKLSLV 119 (383)
Q Consensus 61 ------------------~~~~~~~~~~~~~~~~~~l-~s~~~D~ti~~Wd~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (383)
....+.+++++++ +..| ++++.|++|++||+. ++.... .+.. .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~~dg~v~iwd~~~~~~~~~~----~~~~----------~ 146 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSD--ESRLIACADSDKSLLVFDVDKTSKNVLK----LRKR----------F 146 (450)
T ss_dssp -----------------CCCCCEEEEEECTT--SSEEEEEEGGGTEEEEEEECSSSSSCEE----EEEE----------E
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCC--CCEEEEEECCCCeEEEEECcCCCCceee----eeec----------c
Confidence 0014778889884 5675 899999999999997 553211 1100 0
Q ss_pred ccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeee----
Q 016769 120 KEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT---- 195 (383)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~---- 195 (383)
.... . .....+.+++. +++ +++.++.+++|++.+.....
T Consensus 147 ~~~~----------~-------------------------v~~~~~sp~~~-~l~-~~~~~g~v~~~~~~~~~~~~~~~~ 189 (450)
T 2vdu_B 147 CFSK----------R-------------------------PNAISIAEDDT-TVI-IADKFGDVYSIDINSIPEEKFTQE 189 (450)
T ss_dssp ECSS----------C-------------------------EEEEEECTTSS-EEE-EEETTSEEEEEETTSCCCSSCCCC
T ss_pred cCCC----------C-------------------------ceEEEEcCCCC-EEE-EEeCCCcEEEEecCCcccccccce
Confidence 0000 0 00012234443 344 45568999999998766432
Q ss_pred EeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCc
Q 016769 196 RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG 275 (383)
Q Consensus 196 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 275 (383)
.+. .+...+.++ .|.|+. .+...+++|+.|++|++||+++.......+.+|..+|.++.|+ ++..
T Consensus 190 ~~~----------~h~~~v~~~---~~sp~~-~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~ 254 (450)
T 2vdu_B 190 PIL----------GHVSMLTDV---HLIKDS-DGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYL 254 (450)
T ss_dssp CSE----------ECSSCEEEE---EEEECT-TSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTE
T ss_pred eee----------cccCceEEE---EEcCCC-CCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCE
Confidence 111 112223333 244430 0124688999999999999987544333366899999999999 8889
Q ss_pred eEEEEcCCcEEEEEccCCCCeeEEeeee---------------------ecCCCCeEEEEECCCCcEEEEEe-CCCcEEE
Q 016769 276 GISGGADQKIVLYNLDHSTGSCVIKKEI---------------------NLERPGISGTSIRPDSKIAATAG-WDRRVRI 333 (383)
Q Consensus 276 ~~s~~~d~~i~~wdl~~~~~~~~~~~~~---------------------~~~~~~i~~~~~~p~~~~l~s~~-~dg~i~i 333 (383)
+++++.|+.|++||+........+.... ......+..++++|+++++++++ .|+.|++
T Consensus 255 l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~i 334 (450)
T 2vdu_B 255 LLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIII 334 (450)
T ss_dssp EEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEE
Confidence 9999999999999997654322221100 01234688999999999999999 8999999
Q ss_pred EEc--CCC---ceEEEecccccceeEEEEeCCCCEEEEEeC------CCcEEEEeCC
Q 016769 334 YNY--RKG---SALAILKYHHATCNAVSFSSDCKLMASASE------DSTVALWELY 379 (383)
Q Consensus 334 wd~--~~~---~~~~~~~~h~~~v~~v~~spd~~~las~s~------d~~i~~w~~~ 379 (383)
||+ ..+ +.+..+..| ..|.+++|+|++.+++.++. +..|++|.+.
T Consensus 335 w~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 335 LEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 999 555 566677777 78999999996544444443 5668999875
No 93
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=6.2e-27 Score=218.38 Aligned_cols=273 Identities=15% Similarity=0.094 Sum_probs=158.3
Q ss_pred eecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccc-----cccccccccceeeeeeecCC------CCcceeEecc
Q 016769 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTV-----SSSWVHSAAHGIVSVATGPS------IGLNKVISQG 83 (383)
Q Consensus 15 ~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~l~s~~ 83 (383)
.+|...+...++++++.+|++|+.|++|||||..++.+. ..+..|. ..|.+++|+|. .+++.|+|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~--~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHH--NFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCS--SCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCC--CceEEEEEccccccccCCCCCEEEEEE
Confidence 345555556667777889999999999999998765432 2233343 45778888752 2457899999
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.|++||+||+.++.. ......+ ..+ ....
T Consensus 164 ~D~tv~~Wd~~~~~~----~~~~~~~----------~~~-------------------------------------v~~v 192 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGP----ILAGYPL----------SSP-------------------------------------GISV 192 (393)
T ss_dssp TTSEEEEEEEETTEE----EEEEEEC----------SSC-------------------------------------EEEE
T ss_pred CCCeEEEEECCCCce----eeeecCC----------CCC-------------------------------------cEEE
Confidence 999999999976521 0000000 000 0001
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
.+.+++.. ++++++.|++|++||+++++......+... ..... .++...+.
T Consensus 193 ~~~p~~~~-~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~--------~~~~~-----------------~~s~~~~~--- 243 (393)
T 4gq1_A 193 QFRPSNPN-QLIVGERNGNIRIFDWTLNLSAEENSQTEL--------VKNPW-----------------LLTLNTLP--- 243 (393)
T ss_dssp EEETTEEE-EEEEEETTSEEEEEETTCCC------------------CSCCC-----------------SEEEESGG---
T ss_pred EECCCCCc-eEEecCCCCEEEEEECCCCcccccccccCC--------cccce-----------------EEeccccc---
Confidence 22333333 455677889999999998875443322100 00000 01110010
Q ss_pred EEeCCCCCCceeeeeccccCeEEEEEe-CCCCceEEEEcCCcEEEEEccCCCCeeEEee---------------eeecCC
Q 016769 244 VWDIRNPGIPLTAMKVHLEPVLCLSID-ESCNGGISGGADQKIVLYNLDHSTGSCVIKK---------------EINLER 307 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~---------------~~~~~~ 307 (383)
.........|...+.++.+. +++..+++++.|+++++||+........+.. .....
T Consensus 244 -------~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~- 315 (393)
T 4gq1_A 244 -------LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLF- 315 (393)
T ss_dssp -------GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSS-
T ss_pred -------ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccccc-
Confidence 00112234677888888885 6888899999999999999864322111100 00001
Q ss_pred CCeEEEEECC--CCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 308 PGISGTSIRP--DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 308 ~~i~~~~~~p--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.......++| ++.++++|+.||+|++||+.+++....+.+|..+|.+++|||||++||+++.|| +.+|.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 316 PSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp CCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred CcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 1111223333 445778888999999999999998888888999999999999999999999887 555544
No 94
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=1.7e-25 Score=201.44 Aligned_cols=253 Identities=18% Similarity=0.223 Sum_probs=168.9
Q ss_pred eeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeec
Q 016769 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (383)
Q Consensus 14 l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~ 93 (383)
+.+|...|++|+|+|++++|+||+.|++|++||..+++++.....|.. .+.++... +..+++++.++.+++|+.
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~--~~~~~~~~----~~~l~s~~~~~~~~~~~~ 136 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA--RVGSLSWN----SYILSSGSRSGHIHHHDV 136 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS--CEEEEEEE----TTEEEEEETTSEEEEEET
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccc--eEEEeecC----CCEEEEEecCCceEeeec
Confidence 457889999999999999999999999999999998887766554432 23344433 468899999999999998
Q ss_pred CCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCcee
Q 016769 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYM 173 (383)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (383)
...... ...+..+.. ......+.+.+. +
T Consensus 137 ~~~~~~---~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~--~ 164 (318)
T 4ggc_A 137 RVAEHH---VATLSGHSQ-----------------------------------------------EVCGLRWAPDGR--H 164 (318)
T ss_dssp TSSSCE---EEEEECCSS-----------------------------------------------CEEEEEECTTSS--E
T ss_pred CCCcee---EEEEcCccC-----------------------------------------------ceEEEEEcCCCC--E
Confidence 654210 000000000 000011122332 3
Q ss_pred eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc
Q 016769 174 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 253 (383)
Q Consensus 174 ~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~ 253 (383)
+++++.|++|++||+++++......... ....+...+. .+.+.... ...+.+++.+++|++||.+....
T Consensus 165 l~s~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~v~~~---~~~~~~~~-~~~~~~~~~~~~i~lwd~~~~~~- 233 (318)
T 4ggc_A 165 LASGGNDNLVNVWPSAPGEGGWVPLQTF------TQHQGAVKAV---AWCPWQSN-VLATGGGTSDRHIRIWNVCSGAC- 233 (318)
T ss_dssp EEEEETTSCEEEEESSCBTTBSCCSEEE------CCCCSCEEEE---EECTTSTT-EEEEEECTTTCEEEEEETTTCCE-
T ss_pred EEEEecCcceeEEECCCCcccccceeee------cccCCceEEE---EecCCCCc-EEEEEecCCCCEEEEEecccccc-
Confidence 4456778999999998876422111100 0011111111 23333221 12345678899999999887432
Q ss_pred eeeeeccccCeEEEEEeCCCCceEEEE--cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcE
Q 016769 254 LTAMKVHLEPVLCLSIDESCNGGISGG--ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRV 331 (383)
Q Consensus 254 ~~~~~~h~~~v~~~~~~~~~~~~~s~~--~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i 331 (383)
.....+...+..+.+.+.+..+++++ .|+.|++||++... . ...+..|...|++++|+|++++|++|+.||+|
T Consensus 234 -~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~--~--~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v 308 (318)
T 4ggc_A 234 -LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--K--VAELKGHTSRVLSLTMSPDGATVASAAADETL 308 (318)
T ss_dssp -EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--E--EEEECCCSSCEEEEEECTTSSCEEEEETTTEE
T ss_pred -cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc--E--EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeE
Confidence 33345677899999999888877654 79999999997543 2 23455677899999999999999999999999
Q ss_pred EEEEcCCCc
Q 016769 332 RIYNYRKGS 340 (383)
Q Consensus 332 ~iwd~~~~~ 340 (383)
+|||+.+..
T Consensus 309 ~iWd~~~~d 317 (318)
T 4ggc_A 309 RLWRCFELD 317 (318)
T ss_dssp EEECCSCCC
T ss_pred EEEECCCCC
Confidence 999997654
No 95
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=7.9e-27 Score=214.20 Aligned_cols=260 Identities=13% Similarity=0.183 Sum_probs=175.3
Q ss_pred cCCceeeEEEeCC----CCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEee
Q 016769 17 HRASVTDVCFHQT----KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 17 H~~~V~~v~f~~~----~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd 92 (383)
|.+.|++++|+|+ +++|++|+.||.|++||+.+++.+..+..|. ..+.++.+.+. ++..|++++.|++|++||
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--~~i~~~~~~~~-~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHG--NAINELKFHPR-DPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCC--SCEEEEEECSS-CTTEEEEEETTSCEEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCC--CcEEEEEECCC-CCCEEEEEeCCCeEEEEE
Confidence 5688999999999 6799999999999999998887766654443 46888999873 357899999999999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
+++++.. ..+... ... ... .....+.+++. +
T Consensus 145 ~~~~~~~----~~~~~~----------~~~---------~~~-------------------------v~~~~~~~~~~-~ 175 (366)
T 3k26_A 145 IQTDTLV----AIFGGV----------EGH---------RDE-------------------------VLSADYDLLGE-K 175 (366)
T ss_dssp TTTTEEE----EEECST----------TSC---------SSC-------------------------EEEEEECTTSS-E
T ss_pred eecCeEE----EEeccc----------ccc---------cCc-------------------------eeEEEECCCCC-E
Confidence 9876311 000000 000 000 00011233333 3
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCC------C--------C----CcCCCCCceeeEEEeecCCCCCCceEEE
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGG------S--------P----NFSSKGRGMCMAVQAYLPSKSQGFVNVL 234 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~------s--------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (383)
+ ++++.++.|++||+++++....+....... . . ...+...+.++. +. ...++
T Consensus 176 l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~------~~~l~ 245 (366)
T 3k26_A 176 I-MSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR---WL------GDLIL 245 (366)
T ss_dssp E-EEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE---EE------TTEEE
T ss_pred E-EEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE---Ec------CCEEE
Confidence 4 445668999999999876543332100000 0 0 000112222322 21 12588
Q ss_pred EEeCCCcEEEEeCCCCCC-------------ceeeeeccccCeEEEEEeCC--CCceEEEEcCCcEEEEEccCCCCeeEE
Q 016769 235 AGYEDGSILVWDIRNPGI-------------PLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLYNLDHSTGSCVI 299 (383)
Q Consensus 235 sg~~dg~i~~wdl~~~~~-------------~~~~~~~h~~~v~~~~~~~~--~~~~~s~~~d~~i~~wdl~~~~~~~~~ 299 (383)
+++.|+.|++||+++... .+..+..|..+|.++.|+++ +..+++++.|+.|++||++........
T Consensus 246 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 325 (366)
T 3k26_A 246 SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAK 325 (366)
T ss_dssp EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCE
T ss_pred EEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcccc
Confidence 999999999999876432 24566778889999999888 889999999999999999865432212
Q ss_pred eeeeecC--CCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC
Q 016769 300 KKEINLE--RPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 300 ~~~~~~~--~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~ 338 (383)
...+..+ ...|.+++|+|++++|++++.||+|++||+.+
T Consensus 326 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 326 CTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred ceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 2233334 57899999999999999999999999999853
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=3.2e-25 Score=208.85 Aligned_cols=288 Identities=10% Similarity=0.048 Sum_probs=197.7
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCccccccccccc---ccccceeeeeeecCCCCcceeEecccCCe
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV---HSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
+..+..| ..+.+++|+|++.++++++.|+.|++||+.+++....... ..+...+.++++.+ ++..+++++.|++
T Consensus 116 ~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~ 192 (433)
T 3bws_A 116 ISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE--HNELWVSQMQANA 192 (433)
T ss_dssp EEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG--GTEEEEEEGGGTE
T ss_pred EEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC--CCEEEEEECCCCE
Confidence 3344444 4466999999888999999999999999987765532111 11223567778866 4678899999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
|++||+++++.. ..+..+.. ......+.+
T Consensus 193 v~~~d~~~~~~~----~~~~~~~~-----------------------------------------------~~~~~~~~~ 221 (433)
T 3bws_A 193 VHVFDLKTLAYK----ATVDLTGK-----------------------------------------------WSKILLYDP 221 (433)
T ss_dssp EEEEETTTCCEE----EEEECSSS-----------------------------------------------SEEEEEEET
T ss_pred EEEEECCCceEE----EEEcCCCC-----------------------------------------------CeeEEEEcC
Confidence 999999775321 01100000 000011233
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEe--------CC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY--------ED 239 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~--------~d 239 (383)
++. .+++++..++.|++||+++++.+..+.... ....+ .+.|+. ..+++++ .|
T Consensus 222 ~~~-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----------~~~~~---~~~~~g----~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 222 IRD-LVYCSNWISEDISVIDRKTKLEIRKTDKIG-----------LPRGL---LLSKDG----KELYIAQFSASNQESGG 282 (433)
T ss_dssp TTT-EEEEEETTTTEEEEEETTTTEEEEECCCCS-----------EEEEE---EECTTS----SEEEEEEEESCTTCSCC
T ss_pred CCC-EEEEEecCCCcEEEEECCCCcEEEEecCCC-----------CceEE---EEcCCC----CEEEEEECCCCccccCC
Confidence 443 455566668899999999887665554211 11111 233432 2455555 58
Q ss_pred CcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCce-EEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCC
Q 016769 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD 318 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 318 (383)
+.|++||+++.. .... ..|...+..+.|++++..+ ++++.|+.|++||++... ... .+. ....+.+++|+|+
T Consensus 283 g~i~~~d~~~~~-~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~--~~~--~~~-~~~~~~~~~~s~d 355 (433)
T 3bws_A 283 GRLGIYSMDKEK-LIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK--VQK--SIP-VFDKPNTIALSPD 355 (433)
T ss_dssp EEEEEEETTTTE-EEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE--EEE--EEE-CSSSEEEEEECTT
T ss_pred CeEEEEECCCCc-EEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc--EEE--Eec-CCCCCCeEEEcCC
Confidence 899999998743 2333 3456688899999998755 566889999999997432 221 222 3457899999999
Q ss_pred CcEEEEEeC---------------CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeC-CCcEEEEeCC
Q 016769 319 SKIAATAGW---------------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE-DSTVALWELY 379 (383)
Q Consensus 319 ~~~l~s~~~---------------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~-d~~i~~w~~~ 379 (383)
++++++++. ||.|++||+.+++.+..+.. ...+.+++|+|||++|++++. |+.|++|++.
T Consensus 356 g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 356 GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 998888887 57999999999998888765 457899999999999888775 9999999985
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=6.2e-25 Score=205.30 Aligned_cols=257 Identities=16% Similarity=0.189 Sum_probs=176.4
Q ss_pred eeeeee-cCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 11 VAVLRG-HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 11 ~~~l~g-H~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
...+.. |.+.|++++|+|++++|++|+.||.|++||+.+++.+..+..|. ..+.++.+. +..+++++.|++|+
T Consensus 126 ~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~v~~~~~~----~~~l~~~~~dg~i~ 199 (401)
T 4aez_A 126 SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQ--ARVGCLSWN----RHVLSSGSRSGAIH 199 (401)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS--SCEEEEEEE----TTEEEEEETTSEEE
T ss_pred eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCC--CceEEEEEC----CCEEEEEcCCCCEE
Confidence 344444 89999999999999999999999999999998887766654443 356677774 37899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+||+..... ....+..+.. . .....+.+++
T Consensus 200 i~d~~~~~~---~~~~~~~~~~----------------------~-------------------------v~~~~~~~~~ 229 (401)
T 4aez_A 200 HHDVRIANH---QIGTLQGHSS----------------------E-------------------------VCGLAWRSDG 229 (401)
T ss_dssp EEETTSSSC---EEEEEECCSS----------------------C-------------------------EEEEEECTTS
T ss_pred EEecccCcc---eeeEEcCCCC----------------------C-------------------------eeEEEEcCCC
Confidence 999974321 0000000000 0 0001122333
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEe--CCCcEEEEeC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY--EDGSILVWDI 247 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~--~dg~i~~wdl 247 (383)
. + +++++.|+.|++||+++++.+..+..+. ..+.++ .+.|.. ...+++|+ .|+.|++||+
T Consensus 230 ~-~-l~s~~~d~~v~iwd~~~~~~~~~~~~~~----------~~v~~~---~~~p~~---~~ll~~~~gs~d~~i~i~d~ 291 (401)
T 4aez_A 230 L-Q-LASGGNDNVVQIWDARSSIPKFTKTNHN----------AAVKAV---AWCPWQ---SNLLATGGGTMDKQIHFWNA 291 (401)
T ss_dssp S-E-EEEEETTSCEEEEETTCSSEEEEECCCS----------SCCCEE---EECTTS---TTEEEEECCTTTCEEEEEET
T ss_pred C-E-EEEEeCCCeEEEccCCCCCccEEecCCc----------ceEEEE---EECCCC---CCEEEEecCCCCCEEEEEEC
Confidence 3 3 4456678999999999988776664321 112222 244432 22455654 7999999999
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEE--cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG--ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~--~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
++. .++..+. |...+.++.|++++..+++++ .|+.|++||+.... ......+..+...+.+++|+|++++|+++
T Consensus 292 ~~~-~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~--~~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 367 (401)
T 4aez_A 292 ATG-ARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG--LTKQVDIPAHDTRVLYSALSPDGRILSTA 367 (401)
T ss_dssp TTC-CEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE--EEEEEEEECCSSCCCEEEECTTSSEEEEE
T ss_pred CCC-CEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc--ceeEEEecCCCCCEEEEEECCCCCEEEEE
Confidence 874 4455554 567899999999999888854 89999999997543 22233345677889999999999999999
Q ss_pred eCCCcEEEEEcCCCceEEEe
Q 016769 326 GWDRRVRIYNYRKGSALAIL 345 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~~~~~~ 345 (383)
+.||+|++||+.+++.+...
T Consensus 368 ~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 368 ASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp CTTSEEEEEECCC-------
T ss_pred eCCCcEEEEECCCCcccccc
Confidence 99999999999988876544
No 98
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=7.4e-26 Score=208.16 Aligned_cols=184 Identities=16% Similarity=0.147 Sum_probs=133.6
Q ss_pred eeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
+++++|+.+++|++||+++++.+..+... ....++. +.+. .++.+ .|+.|++||+++..
T Consensus 72 ~~~~~~~~d~~v~iWd~~~~~~~~~~~~~-----------~~v~~v~---~~~~------~~~~~-~~~~i~i~d~~~~~ 130 (355)
T 3vu4_A 72 YVAFVTGVKEVVHIWDDVKKQDVSRIKVD-----------APVKDLF---LSRE------FIVVS-YGDVISVFKFGNPW 130 (355)
T ss_dssp EEEEECSSTTEEEEEETTTTEEEEEEECS-----------SCEEEEE---ECSS------EEEEE-ETTEEEEEESSTTC
T ss_pred EEEEEECCccEEEEEECCCCcEEEEEECC-----------CceEEEE---EcCC------EEEEE-EcCEEEEEECCCCc
Confidence 45556666789999999999887766421 1122221 2221 23333 48899999998752
Q ss_pred CceeeeeccccCeEEEEEeCCCCceEE--EEcCCcEEEEEccCCCCee------------EEeeeeecCCCCeEEEEECC
Q 016769 252 IPLTAMKVHLEPVLCLSIDESCNGGIS--GGADQKIVLYNLDHSTGSC------------VIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 252 ~~~~~~~~h~~~v~~~~~~~~~~~~~s--~~~d~~i~~wdl~~~~~~~------------~~~~~~~~~~~~i~~~~~~p 317 (383)
..+..+.. +...+.+++ ..++. |+.|+.|++||+....... .....+..|...|.+++|+|
T Consensus 131 ~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~ 205 (355)
T 3vu4_A 131 KRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR 205 (355)
T ss_dssp CBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT
T ss_pred eeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC
Confidence 33333433 344455555 44444 5789999999997532000 00123456778899999999
Q ss_pred CCcEEEEEeCCCc-EEEEEcCCCceEEEec-c-cccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 318 DSKIAATAGWDRR-VRIYNYRKGSALAILK-Y-HHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 318 ~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~-~-h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
++++|++++.|++ |++||+.+++.+..+. + |...|.+++|+||+++|++++.|++|++||+..+
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 9999999999999 9999999999999997 5 9999999999999999999999999999999644
No 99
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=6.1e-27 Score=216.62 Aligned_cols=243 Identities=14% Similarity=0.100 Sum_probs=165.3
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCC--CCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceecc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG--LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV 140 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (383)
..+.++++++ ++++|++++.|++|++||+.++. ... .+.. | ...
T Consensus 12 ~~v~~~~~s~--~g~~l~~~~~d~~i~iw~~~~~~~~~~~----~~~~---h-------------------~~~------ 57 (377)
T 3dwl_C 12 KPSYEHAFNS--QRTEFVTTTATNQVELYEQDGNGWKHAR----TFSD---H-------------------DKI------ 57 (377)
T ss_dssp SCCSCCEECS--SSSEEECCCSSSCBCEEEEETTEEEECC----CBCC---C-------------------SSC------
T ss_pred CcEEEEEECC--CCCEEEEecCCCEEEEEEccCCceEEEE----EEec---C-------------------Cce------
Confidence 4578889998 46889999999999999997651 100 0000 0 000
Q ss_pred CcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCC---eeeEeccCcCCCCCCcCCCCCceee
Q 016769 141 GETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAE---RCTRLHQNSCGGSPNFSSKGRGMCM 217 (383)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~ 217 (383)
.....+.+++. + +++++.|++|++||++++. ....+.. +...+.++
T Consensus 58 -------------------v~~~~~s~~~~-~-l~s~s~d~~v~vwd~~~~~~~~~~~~~~~----------~~~~v~~~ 106 (377)
T 3dwl_C 58 -------------------VTCVDWAPKSN-R-IVTCSQDRNAYVYEKRPDGTWKQTLVLLR----------LNRAATFV 106 (377)
T ss_dssp -------------------EEEEEECTTTC-C-EEEEETTSSEEEC------CCCCEEECCC----------CSSCEEEE
T ss_pred -------------------EEEEEEeCCCC-E-EEEEeCCCeEEEEEcCCCCceeeeeEecc----------cCCceEEE
Confidence 00012234443 3 3455678999999998876 3333321 11222222
Q ss_pred EEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC--ceeeeec-cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCC
Q 016769 218 AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI--PLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 294 (383)
Q Consensus 218 ~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~--~~~~~~~-h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~ 294 (383)
.+.|+. ..+++|+.|+.|++||++.... ....+.. |...|.++.|++++..+++++.|+.|++||++...
T Consensus 107 ---~~~~~~----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 107 ---RWSPNE----DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRD 179 (377)
T ss_dssp ---ECCTTS----SCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSS
T ss_pred ---EECCCC----CEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecc
Confidence 244432 2588999999999999987542 3456666 99999999999999999999999999999985321
Q ss_pred --------------CeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCce----EEEecccccceeEEE
Q 016769 295 --------------GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA----LAILKYHHATCNAVS 356 (383)
Q Consensus 295 --------------~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~v~ 356 (383)
......... .+...+.+++|+|++++|++++.|++|++||+.+++. +..+.+|...|.+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 258 (377)
T 3dwl_C 180 VDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLL 258 (377)
T ss_dssp CC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEE
T ss_pred cCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEE
Confidence 011112223 5667899999999999999999999999999999887 778889999999999
Q ss_pred EeCCCCEEEEEeCCCcEEEEeCC
Q 016769 357 FSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 357 ~spd~~~las~s~d~~i~~w~~~ 379 (383)
|+||+++|++|+.|+.+ +|+..
T Consensus 259 ~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 259 WANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEETTEEEEEESSSSEE-EECCC
T ss_pred EcCCCCEEEEEcCCcEE-EEEeC
Confidence 99999999999877766 66653
No 100
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=8.9e-26 Score=207.92 Aligned_cols=262 Identities=15% Similarity=0.123 Sum_probs=177.5
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
++..+.+|.+.|++++|+|++++|++|+.|+.|++||+.+++.............+.++.+.+ ++..|++++.|++++
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~ 121 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP--NEKKFAVGSGSRVIS 121 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT--TSSEEEEEETTSSEE
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC--CCCEEEEEeCCCEEE
Confidence 667889999999999999999999999999999999997765333222222234678889988 468899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+||++.+... ... ..+.... ... .....+.+++
T Consensus 122 i~d~~~~~~~----~~~---------~~~~~~~---------~~~-------------------------i~~~~~~~~~ 154 (372)
T 1k8k_C 122 ICYFEQENDW----WVC---------KHIKKPI---------RST-------------------------VLSLDWHPNS 154 (372)
T ss_dssp EEEEETTTTE----EEE---------EEECTTC---------CSC-------------------------EEEEEECTTS
T ss_pred EEEecCCCcc----eee---------eeeeccc---------CCC-------------------------eeEEEEcCCC
Confidence 9999765310 000 0000000 000 0001122333
Q ss_pred CceeeeccCCcceEEEEecC------------------CCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCce
Q 016769 170 PKYMAVAGEQLSEVEIWDLN------------------TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV 231 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~------------------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (383)
. + +++++.++.|++||++ +++.+..+.. +.....++ .+.|+. .
T Consensus 155 ~-~-l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~v~~~---~~~~~~----~ 215 (372)
T 1k8k_C 155 V-L-LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS----------SCGWVHGV---CFSANG----S 215 (372)
T ss_dssp S-E-EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC----------CSSCEEEE---EECSSS----S
T ss_pred C-E-EEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC----------CCCeEEEE---EECCCC----C
Confidence 3 3 3455668999999965 3333333321 11122222 244432 3
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEe-----------
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIK----------- 300 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~----------- 300 (383)
.+++++.|+.|++||+++. .++..+..|..++.++.|++++..++++ .|+.|++|+++...+.....
T Consensus 216 ~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 293 (372)
T 1k8k_C 216 RVAWVSHDSTVCLADADKK-MAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQ 293 (372)
T ss_dssp EEEEEETTTEEEEEEGGGT-TEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC-----
T ss_pred EEEEEeCCCEEEEEECCCC-ceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchh
Confidence 6889999999999999874 4577788899999999999988766655 99999999998621211000
Q ss_pred -------------------------eee-ecCCCCeEEEEEC-CCC---cEEEEEeCCCcEEEEEcCCCce
Q 016769 301 -------------------------KEI-NLERPGISGTSIR-PDS---KIAATAGWDRRVRIYNYRKGSA 341 (383)
Q Consensus 301 -------------------------~~~-~~~~~~i~~~~~~-p~~---~~l~s~~~dg~i~iwd~~~~~~ 341 (383)
..+ ..+...|+++++. +++ ++|++++.||+|++||+.+++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 294 RGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp ---CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred hhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence 111 2567789999865 676 9999999999999999976543
No 101
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=4.5e-26 Score=215.30 Aligned_cols=266 Identities=18% Similarity=0.322 Sum_probs=174.3
Q ss_pred CCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
.+.+.++.+|.+.|++++| ++++|++|+.||+|++||+.+++++..+..|. ..+.++.+.+ +.+++++.|++
T Consensus 163 ~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~--~~v~~l~~~~----~~l~s~s~dg~ 234 (435)
T 1p22_A 163 LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHC--EAVLHLRFNN----GMMVTCSKDRS 234 (435)
T ss_dssp CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCC--SCEEEEECCT----TEEEEEETTSC
T ss_pred CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCC--CcEEEEEEcC----CEEEEeeCCCc
Confidence 3456788999999999999 78899999999999999999888776655443 4577777754 68999999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
|++||++++.... .. ....... .. +..+..
T Consensus 235 i~vwd~~~~~~~~----~~----------~~~~~~~---------~~---------------------------v~~~~~ 264 (435)
T 1p22_A 235 IAVWDMASPTDIT----LR----------RVLVGHR---------AA---------------------------VNVVDF 264 (435)
T ss_dssp EEEEECSSSSCCE----EE----------EEECCCS---------SC---------------------------EEEEEE
T ss_pred EEEEeCCCCCCce----ee----------eEecCCC---------Cc---------------------------EEEEEe
Confidence 9999998764210 00 0000000 00 000011
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
++ ++ +++|+.|+.|++||+++++.+..+..+ .....++. + + ...+++|+.||+|++||+
T Consensus 265 ~~-~~-l~s~~~dg~i~vwd~~~~~~~~~~~~~----------~~~v~~~~---~--~----~~~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 265 DD-KY-IVSASGDRTIKVWNTSTCEFVRTLNGH----------KRGIACLQ---Y--R----DRLVVSGSSDNTIRLWDI 323 (435)
T ss_dssp ET-TE-EEEEETTSEEEEEETTTCCEEEEEECC----------SSCEEEEE---E--E----TTEEEEEETTSCEEEEET
T ss_pred CC-CE-EEEEeCCCeEEEEECCcCcEEEEEcCC----------CCcEEEEE---e--C----CCEEEEEeCCCeEEEEEC
Confidence 22 23 345567899999999999887776532 11222322 2 1 126889999999999999
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCee-----EEeeeeecCCCCeEEEEECCCCcEE
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC-----VIKKEINLERPGISGTSIRPDSKIA 322 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~-----~~~~~~~~~~~~i~~~~~~p~~~~l 322 (383)
++. .++..+..|..+|.++.++ +..+++|+.|+.|++||+....... .....+..+...|.+++| ++++|
T Consensus 324 ~~~-~~~~~~~~h~~~v~~~~~~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l 398 (435)
T 1p22_A 324 ECG-ACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQI 398 (435)
T ss_dssp TTC-CEEEEECCCSSCEEEEECC--SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCE
T ss_pred CCC-CEEEEEeCCcCcEEEEEec--CCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEE
Confidence 874 5577888999999999994 5678999999999999986432100 012234556678999999 77889
Q ss_pred EEEeCCCcEEEEEcCCCceEEEecccccceeEEEEe
Q 016769 323 ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFS 358 (383)
Q Consensus 323 ~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~s 358 (383)
++++.||+|++||+.......... ...+..++.|.
T Consensus 399 ~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~ 433 (435)
T 1p22_A 399 VSSSHDDTILIWDFLNDPAAQAEP-PRSPSRTYTYI 433 (435)
T ss_dssp EECCSSSEEEEEC-----------------------
T ss_pred EEEeCCCEEEEEECCCCCCcccCC-CCCCccceeee
Confidence 999999999999998765443221 23344444454
No 102
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=2.9e-26 Score=216.77 Aligned_cols=147 Identities=12% Similarity=0.158 Sum_probs=116.3
Q ss_pred EEEEEeCCCcEEEEeCCCCCCcee-------eeeccccCeEEEEEeCCC-CceEEEEcCCcEEEEEccCCCCeeEEeeee
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLT-------AMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEI 303 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~-------~~~~h~~~v~~~~~~~~~-~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~ 303 (383)
.+++| .|+.|++||+++....+. .+..|...|.++.|++++ ..+++++.|+.|++||++...........+
T Consensus 191 ~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 269 (447)
T 3dw8_B 191 TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLF 269 (447)
T ss_dssp EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEE
T ss_pred EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEe
Confidence 57777 899999999985343333 356789999999999998 889999999999999998654310001122
Q ss_pred ecCCC------------CeEEEEECCCCcEEEEEeCCCcEEEEEcCC-CceEEEecccccc---------------eeEE
Q 016769 304 NLERP------------GISGTSIRPDSKIAATAGWDRRVRIYNYRK-GSALAILKYHHAT---------------CNAV 355 (383)
Q Consensus 304 ~~~~~------------~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~h~~~---------------v~~v 355 (383)
..+.. .+.+++|+|++++|++++. ++|++||+.. ++.+..+.+|... +..+
T Consensus 270 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~ 348 (447)
T 3dw8_B 270 EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFEC 348 (447)
T ss_dssp CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCE
T ss_pred ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEE
Confidence 22322 7999999999999999998 9999999987 8888888888642 2348
Q ss_pred EEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 356 SFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 356 ~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+|+|++++|++|+.|+.|++||+..
T Consensus 349 ~~s~~~~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 349 CWNGSDSVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp EECTTSSEEEEECSTTEEEEEETTT
T ss_pred EECCCCCEEEEeccCCEEEEEEcCC
Confidence 9999999999999999999999863
No 103
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=8e-26 Score=213.66 Aligned_cols=258 Identities=14% Similarity=0.144 Sum_probs=156.6
Q ss_pred eeeeeecCCceeeEEEeC-CCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 11 VAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~-~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
...+.||.+.|++|+|+| ++.+|+|||.|++|++||+.+.........+.....+.++++++ ++..|++|+.|++|+
T Consensus 157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~g~~dg~i~ 234 (435)
T 4e54_B 157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA--SSRMVVTGDNVGNVI 234 (435)
T ss_dssp EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEET--TTTEEEEECSSSBEE
T ss_pred EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECC--CCCEEEEEeCCCcEe
Confidence 445679999999999998 68899999999999999987543222111222223456778887 468899999999999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+||++.... ..+..+.. .+ ....+.+.+
T Consensus 235 ~wd~~~~~~-----~~~~~h~~----------------------~v-------------------------~~v~~~p~~ 262 (435)
T 4e54_B 235 LLNMDGKEL-----WNLRMHKK----------------------KV-------------------------THVALNPCC 262 (435)
T ss_dssp EEESSSCBC-----CCSBCCSS----------------------CE-------------------------EEEEECTTC
T ss_pred eeccCccee-----EEEecccc----------------------eE-------------------------EeeeecCCC
Confidence 999864321 00000000 00 001123344
Q ss_pred CceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
.. ++++++.|++|++||+++.+....+... ..+...+.++ .|.|+. ..+++|+.|++|++||+++
T Consensus 263 ~~-~~~s~s~d~~v~iwd~~~~~~~~~~~~~-------~~h~~~v~~~---~~spdg----~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 263 DW-FLATASVDQTVKIWDLRQVRGKASFLYS-------LPHRHPVNAA---CFSPDG----ARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp SS-EEEEEETTSBCCEEETTTCCSSSCCSBC-------CBCSSCEEEC---CBCTTS----SEEEEEESSSCEEEEESSS
T ss_pred ce-EEEEecCcceeeEEecccccccceEEEe-------eeccccccce---eECCCC----CeeEEEcCCCEEEEEECCC
Confidence 33 4556677899999999886643322110 0111122221 244432 3688999999999999987
Q ss_pred CCCceeeeecccc------CeEEEEEeCCCCceEEEE------------cCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 250 PGIPLTAMKVHLE------PVLCLSIDESCNGGISGG------------ADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 250 ~~~~~~~~~~h~~------~v~~~~~~~~~~~~~s~~------------~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
...+ ..+..|.. .+....+++.+..+++++ .++.|++||+.... ... .....+...|.
T Consensus 328 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~--~~~-~l~~~~~~~v~ 403 (435)
T 4e54_B 328 WDCP-LGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK--MMC-QLYDPESSGIS 403 (435)
T ss_dssp SSSE-EEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC--EEE-EECCSSCCCCC
T ss_pred Cccc-eEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc--EEE-EEeCCCCCcEE
Confidence 5432 23333321 122334455444444432 34679999987543 221 12234556677
Q ss_pred EE-EECCCCcEEEEEeCCCcEEEEEcCCCceE
Q 016769 312 GT-SIRPDSKIAATAGWDRRVRIYNYRKGSAL 342 (383)
Q Consensus 312 ~~-~~~p~~~~l~s~~~dg~i~iwd~~~~~~~ 342 (383)
++ +|+|++++|++|+ |++|+|||+++++..
T Consensus 404 s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 404 SLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp CEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred EEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 76 6999999998865 889999999887753
No 104
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.94 E-value=3.2e-25 Score=198.77 Aligned_cols=197 Identities=18% Similarity=0.236 Sum_probs=148.1
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCC--CeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTA--ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 242 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~--~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i 242 (383)
++++++ + +++|+.|++|++||++.. +.+..+.. +.+.+.++ .|.+.. ....+++|+.|++|
T Consensus 17 ~s~~g~-~-las~s~D~~v~iw~~~~~~~~~~~~l~g----------H~~~V~~v---~~s~~~--~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 17 MDYYGK-R-MATCSSDKTIKIFEVEGETHKLIDTLTG----------HEGPVWRV---DWAHPK--FGTILASCSYDGKV 79 (297)
T ss_dssp ECTTSS-E-EEEEETTSCEEEEEBCSSCBCCCEEECC----------CSSCEEEE---EECCGG--GCSEEEEEETTTEE
T ss_pred ECCCCC-E-EEEEeCCCEEEEEecCCCCcEEEEEEcc----------ccCCeEEE---EecCCC--cCCEEEEEcCCCEE
Confidence 345554 3 455677899999999753 34445442 12223332 233211 11358899999999
Q ss_pred EEEeCCCCC-CceeeeeccccCeEEEEEeCC--CCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCC-
Q 016769 243 LVWDIRNPG-IPLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD- 318 (383)
Q Consensus 243 ~~wdl~~~~-~~~~~~~~h~~~v~~~~~~~~--~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~- 318 (383)
++||++++. ..+..+..|..+|.++.|+++ +..+++++.|+.|++||++...... ......+...+.+++|+|+
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~--~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS--PIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC--CEEEECCSSCEEEEEECCCC
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee--eeeeecccCccceEeecCCc
Confidence 999998643 234567789999999999886 7789999999999999997542211 1233456678999999997
Q ss_pred ------------CcEEEEEeCCCcEEEEEcCCCc----eEEEecccccceeEEEEeCCC---CEEEEEeCCCcEEEEeCC
Q 016769 319 ------------SKIAATAGWDRRVRIYNYRKGS----ALAILKYHHATCNAVSFSSDC---KLMASASEDSTVALWELY 379 (383)
Q Consensus 319 ------------~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~v~~spd~---~~las~s~d~~i~~w~~~ 379 (383)
+++|++|+.|++|++||+++++ ....+.+|...|.+++|+|++ ++||+||.|++|++||+.
T Consensus 158 ~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp ------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 5799999999999999998765 556788999999999999995 799999999999999985
Q ss_pred C
Q 016769 380 P 380 (383)
Q Consensus 380 ~ 380 (383)
.
T Consensus 238 ~ 238 (297)
T 2pm7_B 238 N 238 (297)
T ss_dssp S
T ss_pred C
Confidence 4
No 105
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=3.9e-25 Score=205.09 Aligned_cols=247 Identities=15% Similarity=0.173 Sum_probs=169.4
Q ss_pred ceeeeeeecCCCCc-ceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccC
Q 016769 63 HGIVSVATGPSIGL-NKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVG 141 (383)
Q Consensus 63 ~~~~~~~~~~~~~~-~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (383)
..+.+++++++ + ..|++++.|++|++||+.++.... .+.. ... ...+.
T Consensus 74 ~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~~-----------~~h---------~~~v~----- 122 (383)
T 3ei3_B 74 RRVTSLEWHPT--HPTTVAVGSKGGDIILWDYDVQNKTS----FIQG-----------MGP---------GDAIT----- 122 (383)
T ss_dssp SCEEEEEECSS--CTTEEEEEEBTSCEEEEETTSTTCEE----EECC-----------CST---------TCBEE-----
T ss_pred CCEEEEEECCC--CCCEEEEEcCCCeEEEEeCCCcccce----eeec-----------CCc---------CCcee-----
Confidence 46888999984 4 789999999999999998664210 0000 000 00000
Q ss_pred cccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEe
Q 016769 142 ETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQA 221 (383)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 221 (383)
...+.+.+..+ +++++.|+.|++||+++ ..+..+.... .......++ .
T Consensus 123 --------------------~~~~~~~~~~~-l~s~~~d~~i~iwd~~~-~~~~~~~~~~-------~~~~~v~~~---~ 170 (383)
T 3ei3_B 123 --------------------GMKFNQFNTNQ-LFVSSIRGATTLRDFSG-SVIQVFAKTD-------SWDYWYCCV---D 170 (383)
T ss_dssp --------------------EEEEETTEEEE-EEEEETTTEEEEEETTS-CEEEEEECCC-------CSSCCEEEE---E
T ss_pred --------------------EEEeCCCCCCE-EEEEeCCCEEEEEECCC-CceEEEeccC-------CCCCCeEEE---E
Confidence 01122212233 44556789999999986 3333333210 011122222 2
Q ss_pred ecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCCeeEEe
Q 016769 222 YLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIK 300 (383)
Q Consensus 222 ~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~~~~~~ 300 (383)
+.|+. ..+++|+.|+.|++||++ ..++..+..|...|.++.|++++. .+++++.|+.|++||+..........
T Consensus 171 ~~~~~----~~l~~~~~d~~i~i~d~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 244 (383)
T 3ei3_B 171 VSVSR----QMLATGDSTGRLLLLGLD--GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYI 244 (383)
T ss_dssp EETTT----TEEEEEETTSEEEEEETT--SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEE
T ss_pred ECCCC----CEEEEECCCCCEEEEECC--CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceE
Confidence 44432 268899999999999995 345778889999999999999988 78999999999999998633211111
Q ss_pred eeeecCCCCeEEEEECC-CCcEEEEEeCCCcEEEEEcCCCceEEEecccc-----------------cceeEEEEeCCCC
Q 016769 301 KEINLERPGISGTSIRP-DSKIAATAGWDRRVRIYNYRKGSALAILKYHH-----------------ATCNAVSFSSDCK 362 (383)
Q Consensus 301 ~~~~~~~~~i~~~~~~p-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~-----------------~~v~~v~~spd~~ 362 (383)
... .+...+.+++|+| ++++|++++.|++|++||+.+++....+.+|. ..+..++|+||++
T Consensus 245 ~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~ 323 (383)
T 3ei3_B 245 AEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ 323 (383)
T ss_dssp EEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT
T ss_pred EEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcc
Confidence 122 3567899999999 99999999999999999999887766665553 2344577778877
Q ss_pred EEEEEeCCCcEEEEeCCCC
Q 016769 363 LMASASEDSTVALWELYPP 381 (383)
Q Consensus 363 ~las~s~d~~i~~w~~~~~ 381 (383)
+ +|+.|+.|++||+...
T Consensus 324 ~--s~s~d~~i~iwd~~~~ 340 (383)
T 3ei3_B 324 L--LLNDKRTIDIYDANSG 340 (383)
T ss_dssp T--CTTCCCCEEEEETTTC
T ss_pred c--ccCCCCeEEEEecCCC
Confidence 7 8889999999998643
No 106
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=1.9e-24 Score=200.83 Aligned_cols=266 Identities=12% Similarity=0.143 Sum_probs=189.0
Q ss_pred CeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCccee-EecccCCeEEEeecCCCCCCCCCeeeeecC
Q 016769 31 PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIENGGLSSNPSLTIKTN 109 (383)
Q Consensus 31 ~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~ 109 (383)
.++++++.|+.|++||+.+++.+..+..+. .+.+++++++ ++.+ ++++.|++|++||+++++... .+..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~d--g~~l~~~~~~d~~i~v~d~~~~~~~~----~~~~~ 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS---NPMGAVISPD--GTKVYVANAHSNDVSIIDTATNNVIA----TVPAG 73 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS---SEEEEEECTT--SSEEEEEEGGGTEEEEEETTTTEEEE----EEECS
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC---CcceEEECCC--CCEEEEECCCCCeEEEEECCCCeEEE----EEECC
Confidence 478999999999999998887766554332 4678888884 5555 688899999999998764210 00000
Q ss_pred ceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecC
Q 016769 110 SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLN 189 (383)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~ 189 (383)
. . .....++++++ ++++++..++.|++||++
T Consensus 74 -------------~----------~-------------------------v~~~~~spdg~-~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 74 -------------S----------S-------------------------PQGVAVSPDGK-QVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp -------------S----------S-------------------------EEEEEECTTSS-EEEEEETTTTEEEEEETT
T ss_pred -------------C----------C-------------------------ccceEECCCCC-EEEEEECCCCEEEEEECC
Confidence 0 0 00012234443 556667777999999999
Q ss_pred CCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEE
Q 016769 190 TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSI 269 (383)
Q Consensus 190 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~ 269 (383)
+++.+..+..+. ....+ .+.++ +...+++++.|+.|++||+++. ..+..+..| ..+..+.|
T Consensus 105 ~~~~~~~~~~~~-----------~~~~~---~~s~d---g~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~-~~~~~~~~ 165 (391)
T 1l0q_A 105 SNTVAGTVKTGK-----------SPLGL---ALSPD---GKKLYVTNNGDKTVSVINTVTK-AVINTVSVG-RSPKGIAV 165 (391)
T ss_dssp TTEEEEEEECSS-----------SEEEE---EECTT---SSEEEEEETTTTEEEEEETTTT-EEEEEEECC-SSEEEEEE
T ss_pred CCeEEEEEeCCC-----------CcceE---EECCC---CCEEEEEeCCCCEEEEEECCCC-cEEEEEecC-CCcceEEE
Confidence 988766554211 11111 24443 2223468888999999999874 345555554 45689999
Q ss_pred eCCCCce-EEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe---CCCcEEEEEcCCCceEEEe
Q 016769 270 DESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG---WDRRVRIYNYRKGSALAIL 345 (383)
Q Consensus 270 ~~~~~~~-~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~---~dg~i~iwd~~~~~~~~~~ 345 (383)
++++..+ ++++.|+.|++||+.... ... ... ....+.+++|+|+++++++++ .++.|++||+.+++.+..+
T Consensus 166 ~~dg~~l~~~~~~~~~v~~~d~~~~~--~~~--~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 166 TPDGTKVYVANFDSMSISVIDTVTNS--VID--TVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI 240 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTE--EEE--EEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCe--EEE--EEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEE
Confidence 9999877 567788999999997543 221 122 235688999999999988888 6999999999999988888
Q ss_pred cccccceeEEEEeCCCCEE-EEEeCCCcEEEEeCC
Q 016769 346 KYHHATCNAVSFSSDCKLM-ASASEDSTVALWELY 379 (383)
Q Consensus 346 ~~h~~~v~~v~~spd~~~l-as~s~d~~i~~w~~~ 379 (383)
..|. .+.+++|+||+++| ++++.|+.|++||+.
T Consensus 241 ~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 241 PVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp ECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 7665 47899999999976 788999999999985
No 107
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=1.6e-25 Score=202.60 Aligned_cols=234 Identities=18% Similarity=0.181 Sum_probs=153.8
Q ss_pred CeeeeeecCCceeeEEEeC--CCCeEEEecCCCeEEEeeCcccc--cccccccccccceeeeeeecCCCCcceeEecccC
Q 016769 10 PVAVLRGHRASVTDVCFHQ--TKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~--~~~~L~sgs~D~~v~vW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
++.+|+||.+.|++|+|++ ++++|+|||.|++|++||+.+++ +...+..|. ..+.++++.|...+..|++++.|
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~--~~V~~v~~~p~~~g~~lasgs~D 126 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHD--SSVNSVCWAPHDYGLILACGSSD 126 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCS--SCCCEEEECCTTTCSCEEEECSS
T ss_pred EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCC--CceEEEEECCCCCCcEEEEEcCC
Confidence 4568999999999999976 48999999999999999997653 222332332 45788999885335789999999
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
++|++||+.++... ........| ...+. . ..+
T Consensus 127 ~~i~lwd~~~~~~~----~~~~~~~~h-------------------~~~v~---------------------~----~~~ 158 (316)
T 3bg1_A 127 GAISLLTYTGEGQW----EVKKINNAH-------------------TIGCN---------------------A----VSW 158 (316)
T ss_dssp SCEEEEEECSSSCE----EECCBTTSS-------------------SSCBC---------------------C----CEE
T ss_pred CCEEEEecCCCCCc----ceeeeeccc-------------------cCCcc---------------------e----EEE
Confidence 99999998754210 000000000 00000 0 000
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 245 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w 245 (383)
.++.. .+ .+ -+...+ . .+ .....+++|+.|++|++|
T Consensus 159 ~~~~~-----~~----~~--~~~~~~----------------~--------------~~---~~~~~l~sgs~D~~v~lW 194 (316)
T 3bg1_A 159 APAVV-----PG----SL--IDHPSG----------------Q--------------KP---NYIKRFASGGCDNLIKLW 194 (316)
T ss_dssp CCCCC-----C------------CCS----------------C--------------CC---CCCCBEECCBTTSBCCEE
T ss_pred ccccC-----Cc----cc--cccccc----------------c--------------Cc---cccceEEEecCCCeEEEE
Confidence 01000 00 00 000000 0 00 001147889999999999
Q ss_pred eCCCCC--CceeeeeccccCeEEEEEeCCC----CceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC
Q 016769 246 DIRNPG--IPLTAMKVHLEPVLCLSIDESC----NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319 (383)
Q Consensus 246 dl~~~~--~~~~~~~~h~~~v~~~~~~~~~----~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 319 (383)
|++... .+...+++|..+|.+++|+|++ ..+++++.|++|++|+++...........+..+...+.+++|+|++
T Consensus 195 d~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g 274 (316)
T 3bg1_A 195 KEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITA 274 (316)
T ss_dssp EECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTT
T ss_pred EeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCC
Confidence 997532 2456778999999999999876 6789999999999999875321000011123345789999999999
Q ss_pred cEEEEEeCCCcEEEEEcC
Q 016769 320 KIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 320 ~~l~s~~~dg~i~iwd~~ 337 (383)
++||+++.|++|++|+..
T Consensus 275 ~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 275 NILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCEEEEESSSCEEEEEEC
T ss_pred CEEEEEcCCCeEEEEEEC
Confidence 999999999999999985
No 108
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=2.7e-24 Score=200.18 Aligned_cols=294 Identities=13% Similarity=0.126 Sum_probs=164.5
Q ss_pred eecCCceeeEEEeC-CCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCC-CcceeEecccCCeEEEee
Q 016769 15 RGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI-GLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 15 ~gH~~~V~~v~f~~-~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~D~ti~~Wd 92 (383)
.+|.+.|++++|+| ++.+|++++.|+.|++||+.+++....... ...+.++.+.+.. ++..+++++.|+.|++||
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNF---EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEEC---SSCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccC---CCceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 36999999999999 778999999999999999988766554332 2345566666532 235789999999999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
++++.... .+..+.. . .....+.++++ +
T Consensus 173 ~~~~~~~~----~~~~~~~----------------------~-------------------------v~~~~~~~~~~-~ 200 (408)
T 4a11_B 173 LKSGSCSH----ILQGHRQ----------------------E-------------------------ILAVSWSPRYD-Y 200 (408)
T ss_dssp SSSSCCCE----EECCCCS----------------------C-------------------------EEEEEECSSCT-T
T ss_pred CCCcceee----eecCCCC----------------------c-------------------------EEEEEECCCCC-c
Confidence 98764211 1100000 0 00011233443 3
Q ss_pred eeeccCCcceEEEEecCCCC-eeeEeccCcCCC--CC---CcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 173 MAVAGEQLSEVEIWDLNTAE-RCTRLHQNSCGG--SP---NFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~-~~~~~~~~~~~~--s~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
++++++.++.|++||+++.. .+..+....... .. ...+...+.++ .+.|+. ..+++++.||.|++||
T Consensus 201 ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~----~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 201 ILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL---CFTSDG----LHLLTVGTDNRMRLWN 273 (408)
T ss_dssp EEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE---EECTTS----SEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE---EEcCCC----CEEEEecCCCeEEEEE
Confidence 45566778999999998876 334332211000 00 01112222222 344432 3688999999999999
Q ss_pred CCCCCCceeeeecc-----ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcE
Q 016769 247 IRNPGIPLTAMKVH-----LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 321 (383)
Q Consensus 247 l~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 321 (383)
+++..... ....+ ...+...........++.++.|+.|++||+...... ..+..+...|.+++|+|++++
T Consensus 274 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~----~~~~~~~~~v~~~~~s~~~~~ 348 (408)
T 4a11_B 274 SSNGENTL-VNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI----TMLKGHYKTVDCCVFQSNFQE 348 (408)
T ss_dssp TTTCCBCC-CCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE----EEECCCSSCEEEEEEETTTTE
T ss_pred CCCCccce-eccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce----eeeccCCCeEEEEEEcCCCCE
Confidence 98754321 11111 112222222333445678889999999999764322 234556778999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeC-CCCEEEEEeCCCcEEEEeC
Q 016769 322 AATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS-DCKLMASASEDSTVALWEL 378 (383)
Q Consensus 322 l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~sp-d~~~las~s~d~~i~~w~~ 378 (383)
|++++.||.|++||+.+++.+.....+... ..+.| +...+.+.+.|+.+++|+.
T Consensus 349 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~W~~ 403 (408)
T 4a11_B 349 LYSGSRDCNILAWVPSLYEPVPDDDETTTK---SQLNPAFEDAWSSSDEEGGTSAWSH 403 (408)
T ss_dssp EEEEETTSCEEEEEECC-----------------------------------------
T ss_pred EEEECCCCeEEEEeCCCCCccCCCCceEec---cccccccceeecccCccCceeecCC
Confidence 999999999999999998877655433322 23444 3346678889999999986
No 109
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.94 E-value=9.9e-24 Score=193.58 Aligned_cols=241 Identities=16% Similarity=0.198 Sum_probs=176.8
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+.++++++ ++..|++++.|++|++||+.+++.. ..+..+.. .+
T Consensus 33 ~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~----~~~~~h~~----------------------~v------- 77 (369)
T 3zwl_B 33 RPLTQVKYNK--EGDLLFSCSKDSSASVWYSLNGERL----GTLDGHTG----------------------TI------- 77 (369)
T ss_dssp SCEEEEEECT--TSCEEEEEESSSCEEEEETTTCCEE----EEECCCSS----------------------CE-------
T ss_pred ceEEEEEEcC--CCCEEEEEeCCCEEEEEeCCCchhh----hhhhhcCC----------------------cE-------
Confidence 4688899998 4688999999999999999876421 11100000 00
Q ss_pred ccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEee
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAY 222 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 222 (383)
....+.+++. ++ ++++.++.|++||+++++.+..+... ....++ .+
T Consensus 78 ------------------~~~~~~~~~~-~l-~s~~~dg~i~iwd~~~~~~~~~~~~~-----------~~v~~~---~~ 123 (369)
T 3zwl_B 78 ------------------WSIDVDCFTK-YC-VTGSADYSIKLWDVSNGQCVATWKSP-----------VPVKRV---EF 123 (369)
T ss_dssp ------------------EEEEECTTSS-EE-EEEETTTEEEEEETTTCCEEEEEECS-----------SCEEEE---EE
T ss_pred ------------------EEEEEcCCCC-EE-EEEeCCCeEEEEECCCCcEEEEeecC-----------CCeEEE---EE
Confidence 0011223333 34 44566899999999998877666421 112222 24
Q ss_pred cCCCCCCceEEEEEeCC-----CcEEEEeCCCCCC----------ceeeeecccc--CeEEEEEeCCCCceEEEEcCCcE
Q 016769 223 LPSKSQGFVNVLAGYED-----GSILVWDIRNPGI----------PLTAMKVHLE--PVLCLSIDESCNGGISGGADQKI 285 (383)
Q Consensus 223 ~~~~~~~~~~~~sg~~d-----g~i~~wdl~~~~~----------~~~~~~~h~~--~v~~~~~~~~~~~~~s~~~d~~i 285 (383)
.+.. ..+++++.+ +.|++||++.... +...+..|.. .+.++.|++++..+++++.|+.|
T Consensus 124 ~~~~----~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 199 (369)
T 3zwl_B 124 SPCG----NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKI 199 (369)
T ss_dssp CTTS----SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEE
T ss_pred ccCC----CEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEE
Confidence 4432 257788888 9999999876432 2334445555 89999999999999999999999
Q ss_pred EEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEE
Q 016769 286 VLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMA 365 (383)
Q Consensus 286 ~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~la 365 (383)
++||+.... .. ......+...+.+++|+|++++|++++.|+.|++||+.+++.+..+. +...+.+++|+|++++++
T Consensus 200 ~i~d~~~~~-~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ 275 (369)
T 3zwl_B 200 SKYDVSNNY-EY--VDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFII 275 (369)
T ss_dssp EEEETTTTT-EE--EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEE
T ss_pred EEEECCCCc-Ee--EEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEE
Confidence 999997522 11 23344566789999999999999999999999999999999888876 788899999999999999
Q ss_pred EEeCCC--------------cEEEEeCCC
Q 016769 366 SASEDS--------------TVALWELYP 380 (383)
Q Consensus 366 s~s~d~--------------~i~~w~~~~ 380 (383)
+++.++ .|++||+..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 276 LGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp EEECCC-------------CEEEEEETTT
T ss_pred EeecCCCceEEEEecCCCcceeEEEecCC
Confidence 999999 899999854
No 110
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.94 E-value=8.3e-24 Score=200.26 Aligned_cols=286 Identities=16% Similarity=0.244 Sum_probs=183.2
Q ss_pred CCCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
.+++.++.+|.+.|++++|+ +++|++|+.||+|++||+.+++++..+..|. ..+.++.+.+ +.+++++.|++
T Consensus 149 ~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~~----~~l~s~s~dg~ 220 (445)
T 2ovr_B 149 GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHT--STVRCMHLHE----KRVVSGSRDAT 220 (445)
T ss_dssp CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEEET----TEEEEEETTSE
T ss_pred CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCC--CcEEEEEecC----CEEEEEeCCCE
Confidence 35667889999999999997 5699999999999999998887776655443 3466777653 67999999999
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
|++||+++++.. ..+..+.......... ..........+....++...+.... .. . .....+..+..
T Consensus 221 i~~wd~~~~~~~----~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~-~~-~------~~~~~v~~~~~ 287 (445)
T 2ovr_B 221 LRVWDIETGQCL----HVLMGHVAAVRCVQYD-GRRVVSGAYDFMVKVWDPETETCLH-TL-Q------GHTNRVYSLQF 287 (445)
T ss_dssp EEEEESSSCCEE----EEEECCSSCEEEEEEC-SSCEEEEETTSCEEEEEGGGTEEEE-EE-C------CCSSCEEEEEE
T ss_pred EEEEECCCCcEE----EEEcCCcccEEEEEEC-CCEEEEEcCCCEEEEEECCCCcEeE-Ee-c------CCCCceEEEEE
Confidence 999999876421 1222221111111111 1111111111111112211111000 00 0 00011111222
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
++ .+ +++++.|+.|++||+++++.+..+..+. ....++. + . ...+++|+.||.|++||+
T Consensus 288 ~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------~~v~~~~---~--~----~~~l~~~~~dg~i~vwd~ 346 (445)
T 2ovr_B 288 DG-IH-VVSGSLDTSIRVWDVETGNCIHTLTGHQ----------SLTSGME---L--K----DNILVSGNADSTVKIWDI 346 (445)
T ss_dssp CS-SE-EEEEETTSCEEEEETTTCCEEEEECCCC----------SCEEEEE---E--E----TTEEEEEETTSCEEEEET
T ss_pred CC-CE-EEEEeCCCeEEEEECCCCCEEEEEcCCc----------ccEEEEE---E--e----CCEEEEEeCCCeEEEEEC
Confidence 33 33 4456678999999999998777664321 1112221 1 1 125889999999999999
Q ss_pred CCCCCceeeeec---cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee-eecCCCCeEEEEECCCCcEEE
Q 016769 248 RNPGIPLTAMKV---HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE-INLERPGISGTSIRPDSKIAA 323 (383)
Q Consensus 248 ~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~-~~~~~~~i~~~~~~p~~~~l~ 323 (383)
++. ..+..+.. |..+|.++.+++ ..+++++.|+.|++||+........+... ...+...+.+++|+|++.+++
T Consensus 347 ~~~-~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la 423 (445)
T 2ovr_B 347 KTG-QCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCA 423 (445)
T ss_dssp TTC-CEEEEECSTTSCSSCEEEEEECS--SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEE
T ss_pred CCC-cEEEEEccCCCCCCCEEEEEECC--CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEE
Confidence 874 44566665 788999999974 67899999999999999765432222111 124556799999999999999
Q ss_pred EEeCCCc----EEEEEcCC
Q 016769 324 TAGWDRR----VRIYNYRK 338 (383)
Q Consensus 324 s~~~dg~----i~iwd~~~ 338 (383)
+|+.||+ |.+||...
T Consensus 424 ~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 424 VGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EECSSSSSCCEEEEEECCC
T ss_pred EcccCCCCccEEEEEECCC
Confidence 9999998 99999964
No 111
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=8.3e-24 Score=197.60 Aligned_cols=251 Identities=17% Similarity=0.224 Sum_probs=176.1
Q ss_pred CceeeEEEeCCCC-eEEEecCCCeEEEeeCccccc----ccccccccccceeeeeeecCCCCcceeEecccCCeEEEeec
Q 016769 19 ASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT----VSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (383)
Q Consensus 19 ~~V~~v~f~~~~~-~L~sgs~D~~v~vW~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~ 93 (383)
.....++++|+.. ++++++.||.|+||++..... ...+..| ...+.++++++. +++.|++++.|++|++||+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h--~~~V~~~~~~p~-~~~~l~s~s~dg~v~vw~~ 111 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGH--TAPVLDIAWCPH-NDNVIASGSEDCTVMVWEI 111 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCC--SSCEEEEEECTT-CTTEEEEEETTSEEEEEEC
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecC--CCCEEEEEeCCC-CCCEEEEEeCCCeEEEEEc
Confidence 3445688898875 455689999999999855322 2223233 346888999883 3578999999999999999
Q ss_pred CCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCcee
Q 016769 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYM 173 (383)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (383)
+++....... . ...
T Consensus 112 ~~~~~~~~~~-----------------------------------------------------------------~-~~~ 125 (402)
T 2aq5_A 112 PDGGLVLPLR-----------------------------------------------------------------E-PVI 125 (402)
T ss_dssp CTTCCSSCBC-----------------------------------------------------------------S-CSE
T ss_pred cCCCCccccC-----------------------------------------------------------------C-ceE
Confidence 7653210000 0 000
Q ss_pred eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc
Q 016769 174 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 253 (383)
Q Consensus 174 ~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~ 253 (383)
...+ +.+. +.++ .+.|.. ...+++|+.|++|++||+++. ..
T Consensus 126 ~~~~-h~~~-------------------------------v~~~---~~~p~~---~~~l~s~~~dg~i~iwd~~~~-~~ 166 (402)
T 2aq5_A 126 TLEG-HTKR-------------------------------VGIV---AWHPTA---QNVLLSAGCDNVILVWDVGTG-AA 166 (402)
T ss_dssp EEEC-CSSC-------------------------------EEEE---EECSSB---TTEEEEEETTSCEEEEETTTT-EE
T ss_pred EecC-CCCe-------------------------------EEEE---EECcCC---CCEEEEEcCCCEEEEEECCCC-Cc
Confidence 0000 0000 0011 122221 125788999999999999874 44
Q ss_pred eeee--eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeee-ecCCC-CeEEEEECCCCcEEEEE---e
Q 016769 254 LTAM--KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI-NLERP-GISGTSIRPDSKIAATA---G 326 (383)
Q Consensus 254 ~~~~--~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~-~~~~~-~i~~~~~~p~~~~l~s~---~ 326 (383)
...+ ..|...|.++.|++++..+++++.|+.|++||++... ... .. ..+.. .+..+.|+|+++++++| +
T Consensus 167 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~ 242 (402)
T 2aq5_A 167 VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT--VVA--EKDRPHEGTRPVHAVFVSEGKILTTGFSRM 242 (402)
T ss_dssp EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE--EEE--EEECSSCSSSCCEEEECSTTEEEEEEECTT
T ss_pred cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc--eee--eeccCCCCCcceEEEEcCCCcEEEEeccCC
Confidence 5666 6799999999999999999999999999999997543 222 22 23433 38899999999999999 7
Q ss_pred CCCcEEEEEcCCCce-EEEe-cccccceeEEEEeCCCCEEE-EEeCCCcEEEEeCCCC
Q 016769 327 WDRRVRIYNYRKGSA-LAIL-KYHHATCNAVSFSSDCKLMA-SASEDSTVALWELYPP 381 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~-~~~~-~~h~~~v~~v~~spd~~~la-s~s~d~~i~~w~~~~~ 381 (383)
.|+.|++||+.+++. +... ..|...+.+++|+||+++|+ +|+.|+.|++||+...
T Consensus 243 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 243 SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS
T ss_pred CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 999999999988654 3222 25777899999999999886 5668999999998643
No 112
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.3e-24 Score=192.43 Aligned_cols=249 Identities=16% Similarity=0.192 Sum_probs=170.7
Q ss_pred CCeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccc---cccccccccccceeeeeeecCCCCcceeEecccC
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (383)
+....+.+|.+.|++++|+|++++|++|+.|+.|++|++.... ....+..|. ..+.++.+. ++.+++++.|
T Consensus 50 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~----~~~l~~~~~d 123 (313)
T 3odt_A 50 WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQ--GNVCSLSFQ----DGVVISGSWD 123 (313)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCS--SCEEEEEEE----TTEEEEEETT
T ss_pred EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcc--cCEEEEEec----CCEEEEEeCC
Confidence 3456788999999999999999999999999999999986543 233333332 456677773 4789999999
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
+++++||. +.. ...+..+... + . ...+
T Consensus 124 ~~i~~~d~--~~~----~~~~~~~~~~----------------------v------------------------~-~~~~ 150 (313)
T 3odt_A 124 KTAKVWKE--GSL----VYNLQAHNAS----------------------V------------------------W-DAKV 150 (313)
T ss_dssp SEEEEEET--TEE----EEEEECCSSC----------------------E------------------------E-EEEE
T ss_pred CCEEEEcC--CcE----EEecccCCCc----------------------e------------------------e-EEEE
Confidence 99999992 210 1111000000 0 0 0001
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 245 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w 245 (383)
.+....++ ++++.++.|++||.. +....+... ......++. +.+.. .+++++.||.|++|
T Consensus 151 ~~~~~~~l-~~~~~d~~i~i~d~~--~~~~~~~~~---------~~~~i~~~~---~~~~~-----~~~~~~~dg~i~i~ 210 (313)
T 3odt_A 151 VSFSENKF-LTASADKTIKLWQND--KVIKTFSGI---------HNDVVRHLA---VVDDG-----HFISCSNDGLIKLV 210 (313)
T ss_dssp EETTTTEE-EEEETTSCEEEEETT--EEEEEECSS---------CSSCEEEEE---EEETT-----EEEEEETTSEEEEE
T ss_pred ccCCCCEE-EEEECCCCEEEEecC--ceEEEEecc---------CcccEEEEE---EcCCC-----eEEEccCCCeEEEE
Confidence 11112233 445668999999943 333333210 111222222 33321 38899999999999
Q ss_pred eCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE
Q 016769 246 DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 246 dl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
|+++. .++..++.|..+|.++.|++++ .+++++.|+.|++||+..... ......+...+.+++|+|+++ ++++
T Consensus 211 d~~~~-~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~i~~~~~~~~~~-~~~~ 283 (313)
T 3odt_A 211 DMHTG-DVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSL----KQVITLPAISIWSVDCMSNGD-IIVG 283 (313)
T ss_dssp ETTTC-CEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCE----EEEEECSSSCEEEEEECTTSC-EEEE
T ss_pred ECCch-hhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCce----eEEEeccCceEEEEEEccCCC-EEEE
Confidence 99874 5577788899999999999988 689999999999999876532 223345667899999999998 5679
Q ss_pred eCCCcEEEEEcCCCceEE
Q 016769 326 GWDRRVRIYNYRKGSALA 343 (383)
Q Consensus 326 ~~dg~i~iwd~~~~~~~~ 343 (383)
+.||.|++||+.+++...
T Consensus 284 ~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 284 SSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp ETTSCEEEEESCGGGCCC
T ss_pred eCCCcEEEEeCCCCceee
Confidence 999999999998876543
No 113
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=7.1e-24 Score=194.46 Aligned_cols=252 Identities=16% Similarity=0.214 Sum_probs=172.6
Q ss_pred eeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEe
Q 016769 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~W 91 (383)
..+.+|.+.|++++|+|++++|++|+.|+.|++||+.+++.... ..| ...+.++.+.+..++..|++++.|++|++|
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~--~~~v~~~~~~~~~~~~~l~~~~~dg~i~vw 156 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI-AQH--DAPVKTIHWIKAPNYSCVMTGSWDKTLKFW 156 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE-EEC--SSCEEEEEEEECSSCEEEEEEETTSEEEEE
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee-ccc--cCceEEEEEEeCCCCCEEEEccCCCcEEEE
Confidence 67899999999999999999999999999999999987765542 233 345778888322256789999999999999
Q ss_pred ecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCc
Q 016769 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPK 171 (383)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (383)
|+++++... .+..... +.. ..... .
T Consensus 157 d~~~~~~~~----~~~~~~~-----------------------~~~---------------------------~~~~~-~ 181 (368)
T 3mmy_A 157 DTRSSNPMM----VLQLPER-----------------------CYC---------------------------ADVIY-P 181 (368)
T ss_dssp CSSCSSCSE----EEECSSC-----------------------EEE---------------------------EEEET-T
T ss_pred ECCCCcEEE----EEecCCC-----------------------ceE---------------------------EEecC-C
Confidence 998764211 1110000 000 00001 1
Q ss_pred eeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
.++ ++..++.+++||++............ ......+..+ .+........+++++.||.|++||++...
T Consensus 182 ~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~~~~~~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 182 MAV-VATAERGLIVYQLENQPSEFRRIESP--------LKHQHRCVAI---FKDKQNKPTGFALGSIEGRVAIHYINPPN 249 (368)
T ss_dssp EEE-EEEGGGCEEEEECSSSCEEEEECCCS--------CSSCEEEEEE---EECTTSCEEEEEEEETTSEEEEEESSCSC
T ss_pred eeE-EEeCCCcEEEEEeccccchhhhcccc--------ccCCCceEEE---cccCCCCCCeEEEecCCCcEEEEecCCCC
Confidence 222 33457899999998866443332110 1111222222 12211122238899999999999998743
Q ss_pred --Cceeeeecccc------------CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC
Q 016769 252 --IPLTAMKVHLE------------PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 252 --~~~~~~~~h~~------------~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p 317 (383)
.....++.|.. +|.++.|++++..+++++.|+.|++||++... .. ..+..+...+.+++|+|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~--~~--~~~~~~~~~v~~~~~s~ 325 (368)
T 3mmy_A 250 PAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART--KL--KTSEQLDQPISACCFNH 325 (368)
T ss_dssp HHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE--EE--EECCCCSSCEEEEEECT
T ss_pred ccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc--EE--EEecCCCCCceEEEECC
Confidence 23456666765 79999999999999999999999999997542 22 23445667899999999
Q ss_pred CCcEEEEEeCCCcEEEEEcC
Q 016769 318 DSKIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~ 337 (383)
++++|++++.|+..+.|++.
T Consensus 326 ~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 326 NGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp TSSCEEEEECCCSTTCGGGC
T ss_pred CCCeEEEEeccccccccccc
Confidence 99999999998866666553
No 114
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=3.6e-24 Score=197.67 Aligned_cols=252 Identities=13% Similarity=0.053 Sum_probs=162.2
Q ss_pred eeeecCCceeeEEEeCC---------CCeEEEecCCCeEEEeeCccccccccc-------ccccccceeeeeeecCCCCc
Q 016769 13 VLRGHRASVTDVCFHQT---------KPILFAGTTGGELRIWDTVQHRTVSSS-------WVHSAAHGIVSVATGPSIGL 76 (383)
Q Consensus 13 ~l~gH~~~V~~v~f~~~---------~~~L~sgs~D~~v~vW~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 76 (383)
.|.+|.+.|.+++++++ +..|++|+.|+++|+|++......... ........+.+++|+| ++
T Consensus 68 ~l~~~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp--Dg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR--EG 145 (365)
T ss_dssp ECCTTSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT--TS
T ss_pred EccCCCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC--CC
Confidence 57789999998877543 223445667889999997554321110 0111122356789998 46
Q ss_pred ceeE--ecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccc
Q 016769 77 NKVI--SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKE 154 (383)
Q Consensus 77 ~~l~--s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (383)
++++ +++.|++||+||++++... ..+. .. ..+
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~----~~~~-------------~~----------~~V------------------- 179 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEK----FEIE-------------TR----------GEV------------------- 179 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEE----EEEE-------------CS----------SCC-------------------
T ss_pred CEEEEEECCCCCEEEEeECCCCcEE----EEeC-------------CC----------Cce-------------------
Confidence 6654 5668999999999876321 0000 00 000
Q ss_pred cCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEE
Q 016769 155 SNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL 234 (383)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (383)
...+++++++ ++++ ++ ++.+++|+..++..+...... .+.....+ ..|.|+. ..++
T Consensus 180 ------~~v~fspdg~-~l~s-~s-~~~~~~~~~~~~~~~~~~~~~--------~~~~~v~~---v~fspdg----~~l~ 235 (365)
T 4h5i_A 180 ------KDLHFSTDGK-VVAY-IT-GSSLEVISTVTGSCIARKTDF--------DKNWSLSK---INFIADD----TVLI 235 (365)
T ss_dssp ------CEEEECTTSS-EEEE-EC-SSCEEEEETTTCCEEEEECCC--------CTTEEEEE---EEEEETT----EEEE
T ss_pred ------EEEEEccCCc-eEEe-cc-ceeEEEEEeccCcceeeeecC--------CCCCCEEE---EEEcCCC----CEEE
Confidence 0112345554 4443 34 346777887777655433211 11111111 2355542 3577
Q ss_pred EEeCCC----cEEEEeCCCCCC---ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCC
Q 016769 235 AGYEDG----SILVWDIRNPGI---PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 307 (383)
Q Consensus 235 sg~~dg----~i~~wdl~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~ 307 (383)
+++.|+ .+++||+..... ....+..|..+|.+++|+|++..+++|+.|++|+|||++.. ... ...+..|.
T Consensus 236 ~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~--~~~-~~~~~gH~ 312 (365)
T 4h5i_A 236 AASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL--SMS-KIFKQAHS 312 (365)
T ss_dssp EEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT--EEE-EEETTSSS
T ss_pred EEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC--cEE-EEecCccc
Confidence 787777 688899865432 12456778899999999999999999999999999998753 222 22245678
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEcCCC
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKG 339 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~ 339 (383)
..|++++|+||+++||+||.|++|||||+...
T Consensus 313 ~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 313 FAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 89999999999999999999999999999643
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=3.1e-23 Score=192.59 Aligned_cols=289 Identities=14% Similarity=0.158 Sum_probs=195.0
Q ss_pred CeeeeeecCCceeeEEEeCCCCeE-EEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCccee-EecccCCe
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGT 87 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L-~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~D~t 87 (383)
.+..+.+|. .+.+++|+|++++| ++++.|+.|++||..+++.+..+..+ ..+.+++++++ ++.+ ++++.|++
T Consensus 24 ~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~---~~v~~~~~spd--g~~l~~~~~~~~~ 97 (391)
T 1l0q_A 24 VTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG---SSPQGVAVSPD--GKQVYVTNMASST 97 (391)
T ss_dssp EEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS---SSEEEEEECTT--SSEEEEEETTTTE
T ss_pred EEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC---CCccceEECCC--CCEEEEEECCCCE
Confidence 445666665 48999999999976 78889999999999887766554332 25778888884 5555 56678899
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
|++||+++++... .+.. .. . .....+.+
T Consensus 98 v~v~d~~~~~~~~----~~~~-------------~~----------~-------------------------~~~~~~s~ 125 (391)
T 1l0q_A 98 LSVIDTTSNTVAG----TVKT-------------GK----------S-------------------------PLGLALSP 125 (391)
T ss_dssp EEEEETTTTEEEE----EEEC-------------SS----------S-------------------------EEEEEECT
T ss_pred EEEEECCCCeEEE----EEeC-------------CC----------C-------------------------cceEEECC
Confidence 9999998763110 0000 00 0 00012334
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
+++ .++++++.++.|++||+++++.+..+..+. ....+ .+.++. ...+++++.|+.|++||+
T Consensus 126 dg~-~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-----------~~~~~---~~~~dg---~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 126 DGK-KLYVTNNGDKTVSVINTVTKAVINTVSVGR-----------SPKGI---AVTPDG---TKVYVANFDSMSISVIDT 187 (391)
T ss_dssp TSS-EEEEEETTTTEEEEEETTTTEEEEEEECCS-----------SEEEE---EECTTS---SEEEEEETTTTEEEEEET
T ss_pred CCC-EEEEEeCCCCEEEEEECCCCcEEEEEecCC-----------CcceE---EECCCC---CEEEEEeCCCCEEEEEEC
Confidence 443 454556778899999999988766554211 11111 244432 223467888999999999
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEE---cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEE-E
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG---ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA-A 323 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~---~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l-~ 323 (383)
++. .....+. +...+.++.+++++..+++++ .++.|++||++... .. ..+..+ ..+.+++|+|+++++ +
T Consensus 188 ~~~-~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~--~~--~~~~~~-~~~~~~~~s~dg~~l~~ 260 (391)
T 1l0q_A 188 VTN-SVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK--IT--ARIPVG-PDPAGIAVTPDGKKVYV 260 (391)
T ss_dssp TTT-EEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE--EE--EEEECC-SSEEEEEECTTSSEEEE
T ss_pred CCC-eEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe--EE--EEEecC-CCccEEEEccCCCEEEE
Confidence 874 3344443 455788999999998888877 68999999997542 22 122222 457899999999877 6
Q ss_pred EEeCCCcEEEEEcCCCceEEEeccccccee---EEE------------EeCCC----------CEEEEEeCCCcEEEEeC
Q 016769 324 TAGWDRRVRIYNYRKGSALAILKYHHATCN---AVS------------FSSDC----------KLMASASEDSTVALWEL 378 (383)
Q Consensus 324 s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~---~v~------------~spd~----------~~las~s~d~~i~~w~~ 378 (383)
+++.|++|++||+.+++.+..+..|..+.. .+. |+++. ..+...+.|..+++|++
T Consensus 261 s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 340 (391)
T 1l0q_A 261 ALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDF 340 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEEC
T ss_pred EcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEEC
Confidence 678899999999999998888776655421 122 32221 34667778999999999
Q ss_pred CCC
Q 016769 379 YPP 381 (383)
Q Consensus 379 ~~~ 381 (383)
.++
T Consensus 341 ~~g 343 (391)
T 1l0q_A 341 GDG 343 (391)
T ss_dssp SSS
T ss_pred CCC
Confidence 654
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.6e-25 Score=211.86 Aligned_cols=260 Identities=9% Similarity=0.060 Sum_probs=173.3
Q ss_pred ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccc---cceeeeeeecCCCCcceeEecccCCeEEEee
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA---AHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd 92 (383)
+|.+.|++++|||||.+||+++.||.|++||..+ ++..+. |.. ...+.+++|+| +++.|++|+.||+|++||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP--DG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP--IESSIVVGNEDGELQFFS 157 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS--SSSCEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC--CCCEEEEEcCCCEEEEEE
Confidence 6789999999999999999999999999999654 333332 221 23588999999 578999999999999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
+.++... .+.+ ......+.... .... .....+++++|
T Consensus 158 ~~~~~l~-~~~~---------i~l~ti~~~~~-----gh~~-------------------------~V~sVawSPdg--- 194 (588)
T 2j04_A 158 IRKNSEN-TPEF---------YFESSIRLSDA-----GSKD-------------------------WVTHIVWYEDV--- 194 (588)
T ss_dssp CCCCTTT-CCCC---------EEEEEEECSCT-----TCCC-------------------------CEEEEEEETTE---
T ss_pred CCCCccc-cccc---------eeeeeeecccc-----cccc-------------------------cEEEEEEcCCc---
Confidence 9876321 1100 00000000000 0000 00112344555
Q ss_pred eeeccCCcceEEEEecCCCCee---eEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERC---TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 249 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~ 249 (383)
+++ ++.|++|++||+..+... .++... +...+..++ |. + ..+++++ +++|++||+..
T Consensus 195 Laa-ss~D~tVrlWd~~~~~~~~~~~tL~~~---------h~~~V~sva---Fs-----g-~~LASa~-~~tIkLWd~~~ 254 (588)
T 2j04_A 195 LVA-ALSNNSVFSMTVSASSHQPVSRMIQNA---------SRRKITDLK---IV-----D-YKVVLTC-PGYVHKIDLKN 254 (588)
T ss_dssp EEE-EETTCCEEEECCCSSSSCCCEEEEECC---------CSSCCCCEE---EE-----T-TEEEEEC-SSEEEEEETTT
T ss_pred EEE-EeCCCeEEEEECCCCccccceeeeccc---------ccCcEEEEE---EE-----C-CEEEEEe-CCeEEEEECCC
Confidence 333 455899999999877632 233211 111122222 32 1 2466666 79999999986
Q ss_pred CCCceeeeeccccCeEEEEE--eCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC
Q 016769 250 PGIPLTAMKVHLEPVLCLSI--DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW 327 (383)
Q Consensus 250 ~~~~~~~~~~h~~~v~~~~~--~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~ 327 (383)
.. ......+|...+..+.+ ++++..+++++.||. ++|.++ .++|+||+..+++.
T Consensus 255 ~~-~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d--------------------~~~~spd~~l~a~~-- 310 (588)
T 2j04_A 255 YS-ISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED--------------------ELHVTADNIIAPYL-- 310 (588)
T ss_dssp TE-EEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS--------------------SEEEECCCSSHHHH--
T ss_pred Ce-EEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec--------------------cEEECCCceEEEEc--
Confidence 43 22223379999999999 998888899998999 999765 14588999877764
Q ss_pred CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeC
Q 016769 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE 369 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~ 369 (383)
|+++++|+...+. +..+.+ ...|.+++|||||+.+|+++.
T Consensus 311 d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 311 EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 9999999985444 334544 667999999999999998873
No 117
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=5.5e-24 Score=193.74 Aligned_cols=243 Identities=16% Similarity=0.186 Sum_probs=170.6
Q ss_pred ceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCc
Q 016769 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (383)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (383)
..+.++++++ ++..|++++.|++|++||++++.. ..... .... .. ..+
T Consensus 12 ~~v~~~~~s~--~~~~l~~~~~d~~v~iw~~~~~~~----~~~~~---------~~~~-~~---------~~v------- 59 (342)
T 1yfq_A 12 DYISDIKIIP--SKSLLLITSWDGSLTVYKFDIQAK----NVDLL---------QSLR-YK---------HPL------- 59 (342)
T ss_dssp SCEEEEEEEG--GGTEEEEEETTSEEEEEEEETTTT----EEEEE---------EEEE-CS---------SCE-------
T ss_pred CcEEEEEEcC--CCCEEEEEcCCCeEEEEEeCCCCc----cccce---------eeee-cC---------Cce-------
Confidence 4688899998 468899999999999999976531 00000 0000 00 000
Q ss_pred ccccCccccccccCCccceecccCCCCCc-eeeeccCCcceEEEEec-CCCCeeeEeccCcCCCCCCcCCCCCceeeEEE
Q 016769 143 TVDTDSLCDSKESNRSFEIIDDVPAEGPK-YMAVAGEQLSEVEIWDL-NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQ 220 (383)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~i~~Wdl-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 220 (383)
....+.+++ + ++ ++++.++.|++||+ ++++. ..+... .+...+.++.
T Consensus 60 ------------------~~~~~~~~~-~~~l-~~~~~dg~i~~wd~~~~~~~-~~~~~~--------~~~~~v~~l~-- 108 (342)
T 1yfq_A 60 ------------------LCCNFIDNT-DLQI-YVGTVQGEILKVDLIGSPSF-QALTNN--------EANLGICRIC-- 108 (342)
T ss_dssp ------------------EEEEEEESS-SEEE-EEEETTSCEEEECSSSSSSE-EECBSC--------CCCSCEEEEE--
T ss_pred ------------------EEEEECCCC-CcEE-EEEcCCCeEEEEEeccCCce-Eecccc--------CCCCceEEEE--
Confidence 001122333 3 34 44566899999999 87764 333210 0112222322
Q ss_pred eecCCCCCCceEEEEEeCCCcEEEEeCCC---------CCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEcc
Q 016769 221 AYLPSKSQGFVNVLAGYEDGSILVWDIRN---------PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291 (383)
Q Consensus 221 ~~~~~~~~~~~~~~sg~~dg~i~~wdl~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~ 291 (383)
+.+ . ..+++++.|+.|++||+++ .. ++..+. |...+.++.+++++ +++++.|+.|++||++
T Consensus 109 -~~~-~----~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~ 178 (342)
T 1yfq_A 109 -KYG-D----DKLIAASWDGLIEVIDPRNYGDGVIAVKNL-NSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLP 178 (342)
T ss_dssp -EET-T----TEEEEEETTSEEEEECHHHHTTBCEEEEES-CSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESS
T ss_pred -eCC-C----CEEEEEcCCCeEEEEcccccccccccccCC-eeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECC
Confidence 333 1 2588999999999999875 32 334444 78899999999876 8999999999999998
Q ss_pred C-CCCeeEEeeeeecCCCCeEEEEECC-CCcEEEEEeCCCcEEEEEcCCC------ceEEEeccccc---------ceeE
Q 016769 292 H-STGSCVIKKEINLERPGISGTSIRP-DSKIAATAGWDRRVRIYNYRKG------SALAILKYHHA---------TCNA 354 (383)
Q Consensus 292 ~-~~~~~~~~~~~~~~~~~i~~~~~~p-~~~~l~s~~~dg~i~iwd~~~~------~~~~~~~~h~~---------~v~~ 354 (383)
. ...... .....+...+.+++|+| +++++++++.||.|++|+++.. +....+..|.. .|.+
T Consensus 179 ~~~~~~~~--~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (342)
T 1yfq_A 179 LCEDDNGT--IEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS 256 (342)
T ss_dssp CCTTCCCE--EEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEE
T ss_pred ccccccce--eeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEE
Confidence 6 332221 12233456799999999 9999999999999999999876 77778888866 9999
Q ss_pred EEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 355 VSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 355 v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
++|+|++++|++|+.||.|++||+..
T Consensus 257 ~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 257 IEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp EEECTTTCCEEEEETTSCEEEEETTT
T ss_pred EEEcCCCCEEEEecCCceEEEEcCcc
Confidence 99999999999999999999999864
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.4e-23 Score=191.80 Aligned_cols=183 Identities=13% Similarity=0.100 Sum_probs=140.0
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCC--
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP-- 250 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~-- 250 (383)
++++|+.|++|++||+++++.+..+... .+.+.. +.|. +++++.|++|++|+....
T Consensus 50 ~l~sg~~Dg~v~iwd~~~~~~~~~~~~~-~v~~~~--------------~~~~-------~~s~s~D~~i~~w~~~~~~~ 107 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLKDSKTITTITTP-NPRTGG--------------EHPA-------IISRGPCNRLLLLYPGNQIT 107 (343)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEE-CCCTTC--------------CCCS-------EEEECSTTEEEEEETTTEEE
T ss_pred EEEEECCCCcEEEEECCCCcEEEEEecC-Cceeee--------------eCCc-------eEEecCCCeEEEEEccCceE
Confidence 5567788999999999998877666421 111111 1221 788999999999976521
Q ss_pred ------CCceeee-eccccCeEEEEEeC--CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcE
Q 016769 251 ------GIPLTAM-KVHLEPVLCLSIDE--SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 321 (383)
Q Consensus 251 ------~~~~~~~-~~h~~~v~~~~~~~--~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 321 (383)
...+..+ ..|.++|.++.+++ ++..+++++.|+.|++||++.... ... ....+...+.+++|+|++++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~--~~~-~~~~~~~~i~~~~~~pdg~~ 184 (343)
T 3lrv_A 108 ILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ--YIV-HSAKSDVEYSSGVLHKDSLL 184 (343)
T ss_dssp EEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE--EEE-ECCCSSCCCCEEEECTTSCE
T ss_pred EeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE--EEE-EecCCCCceEEEEECCCCCE
Confidence 1112222 25668899999999 889999999999999999975442 211 11223346999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCceE-EEecc-cccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 322 AATAGWDRRVRIYNYRKGSAL-AILKY-HHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 322 l~s~~~dg~i~iwd~~~~~~~-~~~~~-h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
|++|+.||+|++||+++++.+ ..+.. |...|.+++|+|++++|++++.| .|++||+...
T Consensus 185 lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~ 245 (343)
T 3lrv_A 185 LALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKD 245 (343)
T ss_dssp EEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSS
T ss_pred EEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCC
Confidence 999999999999999999887 77888 99999999999999999999955 9999999643
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=7.8e-22 Score=187.10 Aligned_cols=258 Identities=11% Similarity=0.051 Sum_probs=167.4
Q ss_pred eeeeecCCceeeEEEeCCCCeE-EEecCCCeEEEeeCc--ccccccccccccccceeeeeeecCCCCcceeEecccCCeE
Q 016769 12 AVLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~~~~~L-~sgs~D~~v~vW~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti 88 (383)
..+.+|.+.|++++|+|++++| ++|+.|+.|+|||+. +++++..+..+.....+.+++++| ++..|++++.|+.+
T Consensus 96 ~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~~g~v 173 (450)
T 2vdu_B 96 LGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE--DDTTVIIADKFGDV 173 (450)
T ss_dssp ----CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT--TSSEEEEEETTSEE
T ss_pred CCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC--CCCEEEEEeCCCcE
Confidence 3456889999999999999996 999999999999998 666665554333345678899998 46889999999999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++|++.++.....+...+..+.. .+ ....+.++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~h~~----------------------~v-------------------------~~~~~sp~ 206 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQEPILGHVS----------------------ML-------------------------TDVHLIKD 206 (450)
T ss_dssp EEEETTSCCCSSCCCCCSEECSS----------------------CE-------------------------EEEEEEEC
T ss_pred EEEecCCcccccccceeeecccC----------------------ce-------------------------EEEEEcCC
Confidence 99999876432100000000000 00 00112233
Q ss_pred --CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 169 --GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 169 --~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
+.+++ ++++.|++|++||+++++.+..+.. .+...+.++. |. + ...+++|+.|++|++||
T Consensus 207 ~~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~---------~h~~~v~~~~---~s-d----~~~l~s~~~d~~v~vwd 268 (450)
T 2vdu_B 207 SDGHQFI-ITSDRDEHIKISHYPQCFIVDKWLF---------GHKHFVSSIC---CG-K----DYLLLSAGGDDKIFAWD 268 (450)
T ss_dssp TTSCEEE-EEEETTSCEEEEEESCTTCEEEECC---------CCSSCEEEEE---EC-S----TTEEEEEESSSEEEEEE
T ss_pred CCCCcEE-EEEcCCCcEEEEECCCCceeeeeec---------CCCCceEEEE---EC-C----CCEEEEEeCCCeEEEEE
Confidence 12344 4566789999999998887655321 1112222222 32 1 23688999999999999
Q ss_pred CCCCCCceeeeecc-------------------------ccCeEEEEEeCCCCceEEEE-cCCcEEEEEc-cCCCCeeEE
Q 016769 247 IRNPGIPLTAMKVH-------------------------LEPVLCLSIDESCNGGISGG-ADQKIVLYNL-DHSTGSCVI 299 (383)
Q Consensus 247 l~~~~~~~~~~~~h-------------------------~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl-~~~~~~~~~ 299 (383)
+++.. .+..+..+ ...|..+.+.+++..+++++ .|+.|++|++ +........
T Consensus 269 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~ 347 (450)
T 2vdu_B 269 WKTGK-NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLAL 347 (450)
T ss_dssp TTTCC-EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEE
T ss_pred CCCCc-EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceee
Confidence 98743 34444422 24688999999999998888 8999999999 222222222
Q ss_pred eeeeecCCCCeEEEEECCCCcEEEEEeC------CCcEEEEEcCC
Q 016769 300 KKEINLERPGISGTSIRPDSKIAATAGW------DRRVRIYNYRK 338 (383)
Q Consensus 300 ~~~~~~~~~~i~~~~~~p~~~~l~s~~~------dg~i~iwd~~~ 338 (383)
...+..+ ..+.+++|+|++.++++++. ++.|.+|.++.
T Consensus 348 ~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 348 KQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp EEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred ccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 3334444 67999999996544444343 55588888753
No 120
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.90 E-value=1.2e-21 Score=177.69 Aligned_cols=278 Identities=14% Similarity=0.155 Sum_probs=152.8
Q ss_pred CCeeeeeecCCceeeEEEeC--CCCeEEEecCCCeEEEeeCcccc---------cccccccccccceeeeeeecCCCCcc
Q 016769 9 DPVAVLRGHRASVTDVCFHQ--TKPILFAGTTGGELRIWDTVQHR---------TVSSSWVHSAAHGIVSVATGPSIGLN 77 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~--~~~~L~sgs~D~~v~vW~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (383)
++...+.+|.+.|++++|+| ++++|++|+.|+.|++||+..+. .+..+..| ...+.++.+.+...+.
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~ 125 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS--KGSLYSVKFAPAHLGL 125 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCC--SSCEEEEEECCGGGCS
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeeccc--CCceeEEEEcCCCCCc
Confidence 45677899999999999999 69999999999999999987653 22222222 3457888888842267
Q ss_pred eeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCC
Q 016769 78 KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNR 157 (383)
Q Consensus 78 ~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (383)
.+++++.|++|++||+.++.......... ...... ..... ...
T Consensus 126 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~--------~~~~~~------~~~~~--------------------~~~--- 168 (351)
T 3f3f_A 126 KLACLGNDGILRLYDALEPSDLRSWTLTS--------EMKVLS------IPPAN--------------------HLQ--- 168 (351)
T ss_dssp EEEEEETTCEEEEEECSSTTCTTCCEEEE--------EEESCS------CCCSS--------------------CSC---
T ss_pred EEEEecCCCcEEEecCCChHHhccccccc--------cccccc------cccCC--------------------ccc---
Confidence 89999999999999998775432111000 000000 00000 000
Q ss_pred ccceecccCCC--CCceeeeccCCcceEEEEecCCCCe--eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEE
Q 016769 158 SFEIIDDVPAE--GPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNV 233 (383)
Q Consensus 158 ~~~~~~~~~~~--~~~~~~~~g~~~~~i~~Wdl~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (383)
... ...+.+. ...+++ +++.++.+.+|+...+.. +..+.. +...+.++ .+.|........+
T Consensus 169 ~~~-~~~~~p~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------h~~~i~~~---~~~p~~~~~~~~l 233 (351)
T 3f3f_A 169 SDF-CLSWCPSRFSPEKLA-VSALEQAIIYQRGKDGKLHVAAKLPG----------HKSLIRSI---SWAPSIGRWYQLI 233 (351)
T ss_dssp CCE-EEEECCCSSSCCEEE-EEETTEEEEEEECTTSCEEEEEECCC----------CCSCEEEE---EECCCSSCSSEEE
T ss_pred cee-EEEeccCCCCCcEEE-EecCCCcEEEEccCCCceeeeeecCC----------CCcceeEE---EECCCCCCcceEE
Confidence 000 0111121 123444 455677888888776654 222221 11222222 3455421112468
Q ss_pred EEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEE----EEcCCcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS----GGADQKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 234 ~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s----~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
++|+.||.|++||++....... ...+.................. +.....+.+|+.. ..........+...
T Consensus 234 ~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~h~~~ 308 (351)
T 3f3f_A 234 ATGCKDGRIRIFKITEKLSPLA-SEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNL----QVELLSEHDDHNGE 308 (351)
T ss_dssp EEEETTSCEEEEEEEECC----------------------------------------CCSE----EEEEEEEECTTSSC
T ss_pred EEEcCCCeEEEEeCCCCcCccc-cCCcccceeccCCCcccccccccccccccceeeeecccc----cccEEEEEeccccc
Confidence 8999999999999986433221 1112222222222222222222 2223333444321 12222344567778
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL 345 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 345 (383)
|++++|+|++++|++++.||+|++||+.+++.+..+
T Consensus 309 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 999999999999999999999999999988665544
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=9.1e-23 Score=181.86 Aligned_cols=97 Identities=9% Similarity=-0.006 Sum_probs=61.3
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeee-----eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCC
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAM-----KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 307 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~ 307 (383)
+++|+.|++|++||.+++ ..+..+ .+|...+.+..++ +..+++++.|++|+|||+....... .+..+.
T Consensus 253 laSGs~D~tIklWd~~tg-k~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~----tL~gH~ 325 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKTT-LSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTA----LLPPVS 325 (356)
T ss_dssp -----CCEEEEEEETTTT-EEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEE----EECCC-
T ss_pred eeccCCCcEEEEEECCCC-EEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEE----EecCCC
Confidence 445666777777776653 222222 2444443333333 5667899999999999997654222 233344
Q ss_pred CCe-EEEEECCCCcEEEEEeCCCcEEEEEc
Q 016769 308 PGI-SGTSIRPDSKIAATAGWDRRVRIYNY 336 (383)
Q Consensus 308 ~~i-~~~~~~p~~~~l~s~~~dg~i~iwd~ 336 (383)
..+ ..++|+||+++|++|+.|++|+|||+
T Consensus 326 ~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 326 DQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 444 46899999999999999999999996
No 122
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=3.8e-22 Score=183.79 Aligned_cols=196 Identities=19% Similarity=0.247 Sum_probs=148.7
Q ss_pred CCCCCceeeeccCCcceEEEEecCC--CCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNT--AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
.+++. ++ ++++.++.|++||++. .+.+..+.. +...+.++. |.+.. ....+++|+.||.|+
T Consensus 20 s~~~~-~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~----------h~~~v~~~~---~~~~~--~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 20 DYYGK-RL-ATCSSDKTIKIFEVEGETHKLIDTLTG----------HEGPVWRVD---WAHPK--FGTILASCSYDGKVL 82 (379)
T ss_dssp CSSSS-EE-EEEETTSCEEEEEEETTEEEEEEEECC----------CSSCEEEEE---ECCGG--GCSEEEEEETTSCEE
T ss_pred cCCCC-EE-EEEECCCcEEEEecCCCcceeeeEecC----------CCCcEEEEE---eCCCC--CCCEEEEeccCCEEE
Confidence 34443 44 4556689999999984 334444432 112222222 33221 123688999999999
Q ss_pred EEeCCCCC-CceeeeeccccCeEEEEEeCC--CCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC---
Q 016769 244 VWDIRNPG-IPLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP--- 317 (383)
Q Consensus 244 ~wdl~~~~-~~~~~~~~h~~~v~~~~~~~~--~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p--- 317 (383)
+||+++.. .....+..|..+|.++.|+++ +..+++++.|+.|++||+......... ....+...+.+++|+|
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI--IIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE--EEECCTTCEEEEEECCCC-
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE--EecCCCCceEEEEEcCccc
Confidence 99998743 145667779999999999998 888999999999999999865432222 3345667899999999
Q ss_pred ----------CCcEEEEEeCCCcEEEEEcCCCc----eEEEecccccceeEEEEeCC---CCEEEEEeCCCcEEEEeCCC
Q 016769 318 ----------DSKIAATAGWDRRVRIYNYRKGS----ALAILKYHHATCNAVSFSSD---CKLMASASEDSTVALWELYP 380 (383)
Q Consensus 318 ----------~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~v~~spd---~~~las~s~d~~i~~w~~~~ 380 (383)
++++|++++.|++|++||+++++ ....+.+|...|.+++|+|+ +++|++++.|+.|++||+..
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 69999999999999999998764 34577889999999999999 89999999999999999864
No 123
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=3.3e-21 Score=186.61 Aligned_cols=304 Identities=12% Similarity=0.033 Sum_probs=191.8
Q ss_pred CCeeeee-ecCCceeeEEEeCCCCeEEEecCCCeEEEeeC--cccccccccccccccceeeeeeecC----CCCcceeEe
Q 016769 9 DPVAVLR-GHRASVTDVCFHQTKPILFAGTTGGELRIWDT--VQHRTVSSSWVHSAAHGIVSVATGP----SIGLNKVIS 81 (383)
Q Consensus 9 ~~~~~l~-gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~s 81 (383)
+++.++. ||. +..++|+|||++|++++.|++|++||+ .+++++..+.. ......++++| + ++++++
T Consensus 170 ~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~---g~~p~~va~sp~~~~d--g~~l~v 242 (543)
T 1nir_A 170 KIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI---GIEARSVESSKFKGYE--DRYTIA 242 (543)
T ss_dssp CEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC---CSEEEEEEECCSTTCT--TTEEEE
T ss_pred eEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec---CCCcceEEeCCCcCCC--CCEEEE
Confidence 3456666 444 889999999999999999999999999 66666555432 23456778887 4 577777
Q ss_pred cc-cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccc
Q 016769 82 QG-RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFE 160 (383)
Q Consensus 82 ~~-~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
++ .+++|++||..+++... .+..... ... . ...... .+ .
T Consensus 243 ~~~~~~~v~v~D~~t~~~~~----~i~~~g~----------~~~------~----~~~~~~--------------~~--v 282 (543)
T 1nir_A 243 GAYWPPQFAIMDGETLEPKQ----IVSTRGM----------TVD------T----QTYHPE--------------PR--V 282 (543)
T ss_dssp EEEESSEEEEEETTTCCEEE----EEECCEE----------CSS------S----CCEESC--------------CC--E
T ss_pred EEccCCeEEEEeccccccce----eecccCc----------ccC------c----cccccC--------------Cc--e
Confidence 66 68999999987764211 1110000 000 0 000000 00 0
Q ss_pred eecccCCCCCceeeeccCCcceEEEEecCCCCeee--EeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeC
Q 016769 161 IIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT--RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 238 (383)
Q Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~ 238 (383)
....++++++. ++++...++.|.+||+.+.+.+. .+...... .. . .|.|+ +...++++..
T Consensus 283 ~~i~~s~~~~~-~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~---------~~--~---~~spd---g~~l~va~~~ 344 (543)
T 1nir_A 283 AAIIASHEHPE-FIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFL---------HD--G---GWDSS---HRYFMTAANN 344 (543)
T ss_dssp EEEEECSSSSE-EEEEETTTTEEEEEECTTSSSCEEEEEECCSSC---------CC--E---EECTT---SCEEEEEEGG
T ss_pred EEEEECCCCCE-EEEEECCCCeEEEEEecCCCcceeEEeccCcCc---------cC--c---eECCC---CCEEEEEecC
Confidence 00112344443 44555667899999998876443 33211000 00 1 23333 2223445667
Q ss_pred CCcEEEEeCCCCCCceeeeec----cccCeEEEEEeCC-CCceEEEE-cCCcEEEEEccCCCC---eeEEeeeeecCCCC
Q 016769 239 DGSILVWDIRNPGIPLTAMKV----HLEPVLCLSIDES-CNGGISGG-ADQKIVLYNLDHSTG---SCVIKKEINLERPG 309 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~----h~~~v~~~~~~~~-~~~~~s~~-~d~~i~~wdl~~~~~---~~~~~~~~~~~~~~ 309 (383)
+++|.+||+++. ..+..+.. |......+ ++++ +..++++. .|++|.+||++.... .......+..+..+
T Consensus 345 ~~~v~v~D~~tg-~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~ 422 (543)
T 1nir_A 345 SNKVAVIDSKDR-RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG 422 (543)
T ss_dssp GTEEEEEETTTT-EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC
T ss_pred CCeEEEEECCCC-eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC
Confidence 899999999874 44555553 44333333 4666 44455654 589999999986221 01222345555567
Q ss_pred eEEEEECCCCcEEEEEe-------CCCcEEEEEcCCCceE-EEe--------cccccceeEEEEeCCCCEEEEEe-----
Q 016769 310 ISGTSIRPDSKIAATAG-------WDRRVRIYNYRKGSAL-AIL--------KYHHATCNAVSFSSDCKLMASAS----- 368 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~-------~dg~i~iwd~~~~~~~-~~~--------~~h~~~v~~v~~spd~~~las~s----- 368 (383)
+..+.++|++++|++++ .+++|.+||+.+++.. ..+ ..+.+.+..++|+|||+.|..+.
T Consensus 423 ~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~ 502 (543)
T 1nir_A 423 SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKN 502 (543)
T ss_dssp CCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTT
T ss_pred ceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCC
Confidence 78899999999999987 3789999999988766 443 35678899999999999877652
Q ss_pred CCCcEEEEeCC
Q 016769 369 EDSTVALWELY 379 (383)
Q Consensus 369 ~d~~i~~w~~~ 379 (383)
.|+.|.|||..
T Consensus 503 ~~~~i~v~D~~ 513 (543)
T 1nir_A 503 DSSALVVVDDK 513 (543)
T ss_dssp SCCEEEEEETT
T ss_pred CCCeEEEEECC
Confidence 48999999974
No 124
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.89 E-value=2.4e-21 Score=182.66 Aligned_cols=220 Identities=19% Similarity=0.270 Sum_probs=158.2
Q ss_pred CCCeeeeeecCCceeeEEEeCCCC-eEEEecCCCeEEEeeCcccccc-------cccccccccceeeeeeecCCCCccee
Q 016769 8 PDPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTV-------SSSWVHSAAHGIVSVATGPSIGLNKV 79 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~v~f~~~~~-~L~sgs~D~~v~vW~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (383)
..+..++.+|.+.|++|+|+|+++ +|++|+.||.|++|++...... ..+..| ...+.++++.+. ++..|
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h--~~~v~~v~~~p~-~~~~l 247 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGH--TAVVEDVAWHLL-HESLF 247 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCC--SSCEEEEEECSS-CTTEE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCC--CCCEeeeEEeCC-CCCEE
Confidence 567889999999999999999998 9999999999999998763221 111122 235778888874 35778
Q ss_pred EecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCcc
Q 016769 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSF 159 (383)
Q Consensus 80 ~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (383)
++++.|++|++||+.++.... +...
T Consensus 248 ~s~~~dg~i~i~d~~~~~~~~-~~~~------------------------------------------------------ 272 (430)
T 2xyi_A 248 GSVADDQKLMIWDTRNNNTSK-PSHT------------------------------------------------------ 272 (430)
T ss_dssp EEEETTSEEEEEETTCSCSSS-CSEE------------------------------------------------------
T ss_pred EEEeCCCeEEEEECCCCCCCc-ceeE------------------------------------------------------
Confidence 899999999999987542100 0000
Q ss_pred ceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCC
Q 016769 160 EIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 239 (383)
Q Consensus 160 ~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~d 239 (383)
+- + ....+ .++ .|.|. +...+++|+.|
T Consensus 273 --------------~~-~-~~~~v-------------------------------~~i---~~~p~---~~~~l~tg~~d 299 (430)
T 2xyi_A 273 --------------VD-A-HTAEV-------------------------------NCL---SFNPY---SEFILATGSAD 299 (430)
T ss_dssp --------------EE-C-CSSCE-------------------------------EEE---EECSS---CTTEEEEEETT
T ss_pred --------------ee-c-CCCCe-------------------------------EEE---EeCCC---CCCEEEEEeCC
Confidence 00 0 00000 000 12221 11146789999
Q ss_pred CcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCc-eEEEEcCCcEEEEEccCCCCe----------eEEeeeeecCCC
Q 016769 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHSTGS----------CVIKKEINLERP 308 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~s~~~d~~i~~wdl~~~~~~----------~~~~~~~~~~~~ 308 (383)
|+|++||+++...++..+..|..+|.++.|++++.. +++++.|+.|++||+...... ..+......+..
T Consensus 300 g~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 379 (430)
T 2xyi_A 300 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 379 (430)
T ss_dssp SEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSS
T ss_pred CeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCC
Confidence 999999999866677888899999999999998864 789999999999999762210 012223345567
Q ss_pred CeEEEEECCCCc-EEEEEeCCCcEEEEEcCC
Q 016769 309 GISGTSIRPDSK-IAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 309 ~i~~~~~~p~~~-~l~s~~~dg~i~iwd~~~ 338 (383)
.+.+++|+|+++ +|++++.||+|++|++..
T Consensus 380 ~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 380 KISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 799999999999 999999999999999964
No 125
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=5.2e-21 Score=185.25 Aligned_cols=288 Identities=11% Similarity=0.056 Sum_probs=191.3
Q ss_pred EEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeec--CCCCCCCCC
Q 016769 25 CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI--ENGGLSSNP 102 (383)
Q Consensus 25 ~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~--~~~~~~~~~ 102 (383)
+|+|++.++++++.|++|++||..+++++..+..+. .+..+.++| ++++|++++.|++|++||+ ++++.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~---~~~~v~~sp--dg~~l~v~~~d~~V~v~D~~~~t~~~---- 214 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY---AVHISRMSA--SGRYLLVIGRDARIDMIDLWAKEPTK---- 214 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST---TEEEEEECT--TSCEEEEEETTSEEEEEETTSSSCEE----
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc---ccceEEECC--CCCEEEEECCCCeEEEEECcCCCCcE----
Confidence 489999999999999999999998887776654222 255778888 5788999999999999999 54421
Q ss_pred eeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC----CCCceeeeccC
Q 016769 103 SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA----EGPKYMAVAGE 178 (383)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~ 178 (383)
...+..+. . .....+++ ++ ++++++..
T Consensus 215 ~~~i~~g~----------~--------------------------------------p~~va~sp~~~~dg-~~l~v~~~ 245 (543)
T 1nir_A 215 VAEIKIGI----------E--------------------------------------ARSVESSKFKGYED-RYTIAGAY 245 (543)
T ss_dssp EEEEECCS----------E--------------------------------------EEEEEECCSTTCTT-TEEEEEEE
T ss_pred EEEEecCC----------C--------------------------------------cceEEeCCCcCCCC-CEEEEEEc
Confidence 00110000 0 00012334 44 45666665
Q ss_pred CcceEEEEecCCCCeeeEeccCcC-CCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCce-ee
Q 016769 179 QLSEVEIWDLNTAERCTRLHQNSC-GGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL-TA 256 (383)
Q Consensus 179 ~~~~i~~Wdl~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~-~~ 256 (383)
.+++|.+||..+.+.+..+.-... .....+.+..+.. .+ .+.+. +...+++...+++|.+||+.+..... ..
T Consensus 246 ~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~--~i-~~s~~---~~~~~vs~~~~g~i~vvd~~~~~~l~~~~ 319 (543)
T 1nir_A 246 WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVA--AI-IASHE---HPEFIVNVKETGKVLLVNYKDIDNLTVTS 319 (543)
T ss_dssp ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEE--EE-EECSS---SSEEEEEETTTTEEEEEECTTSSSCEEEE
T ss_pred cCCeEEEEeccccccceeecccCcccCccccccCCceE--EE-EECCC---CCEEEEEECCCCeEEEEEecCCCcceeEE
Confidence 678999999999888776643110 0000111111111 11 23332 23457778899999999998754322 12
Q ss_pred eeccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeeee--ecCCCCeEEEEECCC-CcEEEEEe-CCCcE
Q 016769 257 MKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEI--NLERPGISGTSIRPD-SKIAATAG-WDRRV 331 (383)
Q Consensus 257 ~~~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~--~~~~~~i~~~~~~p~-~~~l~s~~-~dg~i 331 (383)
+ .+...+..+.|+++++++++++ .+++|.+||+.... ....... ..+.+....+ ++|+ +++++++. .|++|
T Consensus 320 i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~--l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V 395 (543)
T 1nir_A 320 I-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRR--LSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSI 395 (543)
T ss_dssp E-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTE--EEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEE
T ss_pred e-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCe--EEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceE
Confidence 3 3455677899999999876554 58999999987543 3221111 1122222222 4677 56667665 68999
Q ss_pred EEEEcCC-------CceEEEecccccceeEEEEeCCCCEEEEEe-------CCCcEEEEeCCC
Q 016769 332 RIYNYRK-------GSALAILKYHHATCNAVSFSSDCKLMASAS-------EDSTVALWELYP 380 (383)
Q Consensus 332 ~iwd~~~-------~~~~~~~~~h~~~v~~v~~spd~~~las~s-------~d~~i~~w~~~~ 380 (383)
.+||+++ .+.+.++..|...+..++||||+++|.+++ .+++|.+||+..
T Consensus 396 ~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 396 SLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN 458 (543)
T ss_dssp EEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred EEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC
Confidence 9999988 888999999988889999999999999987 278999999864
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=2.5e-22 Score=187.16 Aligned_cols=246 Identities=15% Similarity=0.132 Sum_probs=137.3
Q ss_pred eeeeeecCCceeeEEEeC--------CCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEec
Q 016769 11 VAVLRGHRASVTDVCFHQ--------TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~--------~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 82 (383)
..++.||++.|++|+|+| |+++|||||.|++|||||+.++.++..+..|. ..+.+++|.|. +...|+++
T Consensus 129 ~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~--~~v~~v~~~p~-~~~~l~~~ 205 (393)
T 4gq1_A 129 LGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLS--SPGISVQFRPS-NPNQLIVG 205 (393)
T ss_dssp ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECS--SCEEEEEEETT-EEEEEEEE
T ss_pred ecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCC--CCcEEEEECCC-CCceEEec
Confidence 446789999999999998 88999999999999999997766655544443 45789999984 33578999
Q ss_pred ccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCcccee
Q 016769 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEII 162 (383)
Q Consensus 83 ~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (383)
+.|++|++||+.++.......... .. ................ .....+... ...+
T Consensus 206 ~~d~~v~~wd~~t~~~~~~~~~~~-~~-~~~~~~s~~~~~~~~~--------------------~~~~~~~~~---v~~v 260 (393)
T 4gq1_A 206 ERNGNIRIFDWTLNLSAEENSQTE-LV-KNPWLLTLNTLPLVNT--------------------CHSSGIASS---LANV 260 (393)
T ss_dssp ETTSEEEEEETTCCC-----------C-SCCCSEEEESGGGC--------------------------CCSSS---CSEE
T ss_pred CCCCEEEEEECCCCcccccccccC-Cc-ccceEEecccccceee--------------------eeccccccc---ceee
Confidence 999999999998774321100000 00 0000000000000000 000000000 0001
Q ss_pred cccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCc-CCCCCCcCCCCCce-----eeEEEeecCCCCCCceEEEEE
Q 016769 163 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNS-CGGSPNFSSKGRGM-----CMAVQAYLPSKSQGFVNVLAG 236 (383)
Q Consensus 163 ~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~-~~~s~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~sg 236 (383)
.-..+++. .+++++.|+++++||+.+......+.... ......+.+..... .... .+.+. .+...+++|
T Consensus 261 ~~~~~dg~--~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~sg 335 (393)
T 4gq1_A 261 RWIGSDGS--GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGA-CPHPR--YMDYFATAH 335 (393)
T ss_dssp EEETTTTC--EEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCC-EECSS--CTTEEEEEE
T ss_pred eeecCCCC--EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeE-EEccC--CCCEEEEEE
Confidence 11124444 33456778999999998877554443211 11111111110000 0000 12221 233457788
Q ss_pred eCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEcc
Q 016769 237 YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 291 (383)
Q Consensus 237 ~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~ 291 (383)
+.||+|++||+.++. ....+..|..+|.+++|+|+++.+++++.|| +.+|.|.
T Consensus 336 s~Dg~V~lwd~~~~~-~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 336 SQHGLIQLINTYEKD-SNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp TTTTEEEEEETTCTT-CCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCCCEEEEEECCCCc-EEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 999999999998754 4555667888999999999999999887655 7777654
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.89 E-value=2.2e-20 Score=175.76 Aligned_cols=288 Identities=12% Similarity=0.083 Sum_probs=184.5
Q ss_pred ecCCceeeEE---EeCCCCeEE--------------EecCCCeEEEeeCcc--c--ccccccccccccceeeeeeecCCC
Q 016769 16 GHRASVTDVC---FHQTKPILF--------------AGTTGGELRIWDTVQ--H--RTVSSSWVHSAAHGIVSVATGPSI 74 (383)
Q Consensus 16 gH~~~V~~v~---f~~~~~~L~--------------sgs~D~~v~vW~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~ 74 (383)
.+...++.++ |+|++..++ +++.|+.++||.+.. + +.+..+.. ...+.++++++
T Consensus 58 ~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~---~~~~~~~~~s~-- 132 (433)
T 3bws_A 58 DKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKT---GFQPKSVRFID-- 132 (433)
T ss_dssp ETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEEC---SSCBCCCEESS--
T ss_pred ccCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcC---CCCceEEEEeC--
Confidence 3456677888 888876655 344555445555432 2 22222211 12345777877
Q ss_pred CcceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccc
Q 016769 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKE 154 (383)
Q Consensus 75 ~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (383)
++..+++++.|++|++||+++++... .+ .... . .....
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~----~~-------------~~~~-~---~~~~~--------------------- 170 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVR----LS-------------PPEK-Y---KKKLG--------------------- 170 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEE----EC-------------CCHH-H---HTTCC---------------------
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEee----ec-------------Cccc-c---cccCC---------------------
Confidence 45777888999999999998764211 00 0000 0 00000
Q ss_pred cCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEE
Q 016769 155 SNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL 234 (383)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (383)
......+++++ + ++++++.++.|++||+++++.+..+..+. ....++ .+.+. +...++
T Consensus 171 ----~v~~~~~~~~~-~-~~~s~~~d~~v~~~d~~~~~~~~~~~~~~----------~~~~~~---~~~~~---~~~l~~ 228 (433)
T 3bws_A 171 ----FVETISIPEHN-E-LWVSQMQANAVHVFDLKTLAYKATVDLTG----------KWSKIL---LYDPI---RDLVYC 228 (433)
T ss_dssp ----EEEEEEEGGGT-E-EEEEEGGGTEEEEEETTTCCEEEEEECSS----------SSEEEE---EEETT---TTEEEE
T ss_pred ----ceeEEEEcCCC-E-EEEEECCCCEEEEEECCCceEEEEEcCCC----------CCeeEE---EEcCC---CCEEEE
Confidence 00001122222 2 44556678999999999988776664211 111222 24443 222345
Q ss_pred EEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE--------cCCcEEEEEccCCCCeeEEeeeeecC
Q 016769 235 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG--------ADQKIVLYNLDHSTGSCVIKKEINLE 306 (383)
Q Consensus 235 sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~--------~d~~i~~wdl~~~~~~~~~~~~~~~~ 306 (383)
+++.|+.|++||+++. .....+..+ ..+.++.+++++..+++++ .|+.|++||+.... .... . .+
T Consensus 229 ~~~~~~~i~~~d~~~~-~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~--~~~~--~-~~ 301 (433)
T 3bws_A 229 SNWISEDISVIDRKTK-LEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK--LIDT--I-GP 301 (433)
T ss_dssp EETTTTEEEEEETTTT-EEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE--EEEE--E-EE
T ss_pred EecCCCcEEEEECCCC-cEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc--EEee--c-cC
Confidence 6678999999999874 334455443 3588999999998888877 48899999997542 2211 1 12
Q ss_pred CCCeEEEEECCCCcE-EEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeC---------------C
Q 016769 307 RPGISGTSIRPDSKI-AATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE---------------D 370 (383)
Q Consensus 307 ~~~i~~~~~~p~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~---------------d 370 (383)
...+.+++|+|++++ +++++.|++|++||+.+++....+. +...+.+++|+|||++|++++. |
T Consensus 302 ~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~d 380 (433)
T 3bws_A 302 PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVL 380 (433)
T ss_dssp EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSC
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccc
Confidence 236889999999975 5666899999999999998887775 7778999999999998888877 5
Q ss_pred CcEEEEeCCC
Q 016769 371 STVALWELYP 380 (383)
Q Consensus 371 ~~i~~w~~~~ 380 (383)
|.|++||+..
T Consensus 381 g~v~~~d~~~ 390 (433)
T 3bws_A 381 GKVYVIDTTT 390 (433)
T ss_dssp CEEEEEETTT
T ss_pred eEEEEEECCC
Confidence 7999999853
No 128
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=7.1e-21 Score=191.86 Aligned_cols=197 Identities=18% Similarity=0.236 Sum_probs=149.9
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCC--CeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTA--ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 242 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~--~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i 242 (383)
++++++ ++ ++|+.|+.|++||+.++ +.+..+.. +.+.+.++ .|.+.. ....+++|+.||+|
T Consensus 17 ~s~dg~-~l-atg~~dg~I~vwd~~~~~~~~~~~l~~----------h~~~V~~l---~~s~~~--~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 17 LDYYGK-RL-ATCSSDKTIKIFEVEGETHKLIDTLTG----------HEGPVWRV---DWAHPK--FGTILASCSYDGKV 79 (753)
T ss_dssp CCSSSC-CE-EEEETTTEEEEEEEETTEEEEEEEECC----------CSSCEEEE---EECCTT--SCSEEEEEETTSCE
T ss_pred ECCCCC-eE-EEEECCCcEEEEecCCCCCccceeccC----------CcCceEEE---EecCCC--CCCEEEEEeCCCeE
Confidence 334444 33 45567899999999843 33444432 12222232 243321 12368899999999
Q ss_pred EEEeCCCCC-CceeeeeccccCeEEEEEeCC--CCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC--
Q 016769 243 LVWDIRNPG-IPLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP-- 317 (383)
Q Consensus 243 ~~wdl~~~~-~~~~~~~~h~~~v~~~~~~~~--~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p-- 317 (383)
++||+++.. .....+..|..+|.++.|+++ +..+++++.|+.|++||+........ .....+...+.+++|+|
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~--~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP--IIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC--EEEECCSSCEEEEEECCCC
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce--eEeecCCCceEEEEecCcc
Confidence 999998743 145667789999999999998 88999999999999999976533222 22345667899999999
Q ss_pred -----------CCcEEEEEeCCCcEEEEEcCCC----ceEEEecccccceeEEEEeCC---CCEEEEEeCCCcEEEEeCC
Q 016769 318 -----------DSKIAATAGWDRRVRIYNYRKG----SALAILKYHHATCNAVSFSSD---CKLMASASEDSTVALWELY 379 (383)
Q Consensus 318 -----------~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~v~~spd---~~~las~s~d~~i~~w~~~ 379 (383)
+++++++|+.||+|++||++++ .....+.+|...|.+++|+|+ +++|++|+.||.|++||+.
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 5899999999999999999876 455677899999999999999 8999999999999999986
Q ss_pred C
Q 016769 380 P 380 (383)
Q Consensus 380 ~ 380 (383)
.
T Consensus 238 ~ 238 (753)
T 3jro_A 238 N 238 (753)
T ss_dssp S
T ss_pred C
Confidence 4
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.87 E-value=1.7e-19 Score=163.75 Aligned_cols=276 Identities=9% Similarity=0.124 Sum_probs=163.4
Q ss_pred eEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccC-CeEEEeecC--CCCCCCCCeeeeec
Q 016769 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-GTVKCWDIE--NGGLSSNPSLTIKT 108 (383)
Q Consensus 32 ~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D-~ti~~Wd~~--~~~~~~~~~~~~~~ 108 (383)
++++++.|+.|++|++........+........+..+++++ +++.|++++.+ +++++|+++ ++.. ..+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp--dg~~l~~~~~~~~~v~~~~~~~~~~~~-----~~~-- 77 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSP--DKRYLYVGVRPEFRVLAYRIAPDDGAL-----TFA-- 77 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECT--TSSEEEEEETTTTEEEEEEECTTTCCE-----EEE--
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECC--CCCEEEEeecCCCeEEEEEecCCCCce-----eec--
Confidence 44555889999999985322111111111223456788888 45667766655 999999997 3321 000
Q ss_pred CceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEec
Q 016769 109 NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDL 188 (383)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl 188 (383)
....... . .....++++++ ++++++..++.|++||+
T Consensus 78 --------~~~~~~~-------~----------------------------~~~~~~s~dg~-~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 78 --------AESALPG-------S----------------------------LTHISTDHQGQ-FVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp --------EEEECSS-------C----------------------------CSEEEECTTSS-EEEEEETTTTEEEEEEE
T ss_pred --------cccccCC-------C----------------------------CcEEEEcCCCC-EEEEEecCCCeEEEEEC
Confidence 0000000 0 00012334443 45556666789999999
Q ss_pred CCC---CeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEe-CCCcEEEEeCCCCCCcee----eeecc
Q 016769 189 NTA---ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY-EDGSILVWDIRNPGIPLT----AMKVH 260 (383)
Q Consensus 189 ~~~---~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~-~dg~i~~wdl~~~~~~~~----~~~~h 260 (383)
.++ +....+.... ....+ .+.|+. . .+++++ .++.|.+||+.+.+.... ....+
T Consensus 114 ~~~~~~~~~~~~~~~~-----------~~~~~---~~s~dg---~-~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 175 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLD-----------GCHSA---NISPDN---R-TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTV 175 (343)
T ss_dssp ETTEEEEEEEEECCCT-----------TBCCC---EECTTS---S-EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECS
T ss_pred CCCccccccccccCCC-----------CceEE---EECCCC---C-EEEEecCCCCEEEEEEecCCCceeeecccccccC
Confidence 532 2233322111 01111 133332 2 344444 899999999986333221 22222
Q ss_pred -ccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeeeee-cC-----CCCeEEEEECCCCcEEEE-EeCCCcE
Q 016769 261 -LEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEIN-LE-----RPGISGTSIRPDSKIAAT-AGWDRRV 331 (383)
Q Consensus 261 -~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~~-~~-----~~~i~~~~~~p~~~~l~s-~~~dg~i 331 (383)
...+..+.|++++..++.++ .++.|.+|+++..++......... .. ...+..++|+|++++++. ...|+.|
T Consensus 176 ~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i 255 (343)
T 1ri6_A 176 EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLI 255 (343)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEE
Confidence 34678899999998776554 789999999975444332221211 11 234668999999987774 4479999
Q ss_pred EEEEcC--C--CceEEEecccccceeEEEEeCCCCEEEEEe-CCCcEEEEeCC
Q 016769 332 RIYNYR--K--GSALAILKYHHATCNAVSFSSDCKLMASAS-EDSTVALWELY 379 (383)
Q Consensus 332 ~iwd~~--~--~~~~~~~~~h~~~v~~v~~spd~~~las~s-~d~~i~~w~~~ 379 (383)
++||+. . .+.+..+..+.. +..++|+|||++|++++ .|+.|.+|++.
T Consensus 256 ~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 256 TVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 999998 2 344445544444 88999999999888777 68999999764
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=1.9e-19 Score=181.14 Aligned_cols=294 Identities=10% Similarity=0.018 Sum_probs=180.9
Q ss_pred CCceeeEEEeCCCCeEEEecC-CC-----eEEEeeCccccccccccccccc----------------------ceeeeee
Q 016769 18 RASVTDVCFHQTKPILFAGTT-GG-----ELRIWDTVQHRTVSSSWVHSAA----------------------HGIVSVA 69 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~-D~-----~v~vW~~~~~~~~~~~~~~~~~----------------------~~~~~~~ 69 (383)
...|.+++|+|||++|++++. |+ .|++||+.+++.......+... ..+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457899999999999999998 88 9999999877654333222211 2366788
Q ss_pred ecCCCCcceeEecccCCeEEEeecCCC---CCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCccccc
Q 016769 70 TGPSIGLNKVISQGRDGTVKCWDIENG---GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT 146 (383)
Q Consensus 70 ~~~~~~~~~l~s~~~D~ti~~Wd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (383)
++| ++++|++++. ++|++||++++ .... +..+. .
T Consensus 116 ~Sp--Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~-----l~~~~----------------------~------------- 152 (741)
T 2ecf_A 116 WSP--DAQRLLFPLG-GELYLYDLKQEGKAAVRQ-----LTHGE----------------------G------------- 152 (741)
T ss_dssp ECT--TSSEEEEEET-TEEEEEESSSCSTTSCCB-----CCCSS----------------------S-------------
T ss_pred ECC--CCCEEEEEeC-CcEEEEECCCCCcceEEE-----cccCC----------------------c-------------
Confidence 888 4677777765 99999999876 3211 00000 0
Q ss_pred CccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCC------CceeeEEE
Q 016769 147 DSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKG------RGMCMAVQ 220 (383)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~------~~~~~~~~ 220 (383)
......++++|+. ++.+. ++.|++||+.+++........... ....... ..... ..
T Consensus 153 ------------~~~~~~~SPDG~~-la~~~--~~~i~~~d~~~g~~~~~~~~~~~~--~~~g~~~~v~~~~~~~~~-~~ 214 (741)
T 2ecf_A 153 ------------FATDAKLSPKGGF-VSFIR--GRNLWVIDLASGRQMQLTADGSTT--IGNGIAEFVADEEMDRHT-GY 214 (741)
T ss_dssp ------------CEEEEEECTTSSE-EEEEE--TTEEEEEETTTTEEEECCCCCCSS--EEESCCCHHHHHHSCCCC-SE
T ss_pred ------------ccccccCCCCCCE-EEEEe--CCcEEEEecCCCCEEEeccCCccc--eeccccceeeeecccccc-ce
Confidence 0001234566654 33333 358999999887643222211000 0000000 00000 01
Q ss_pred eecCCCCCCceEEEEEeCCC---------------------------------cEEEEeCCC-CCCceeeee--ccccCe
Q 016769 221 AYLPSKSQGFVNVLAGYEDG---------------------------------SILVWDIRN-PGIPLTAMK--VHLEPV 264 (383)
Q Consensus 221 ~~~~~~~~~~~~~~sg~~dg---------------------------------~i~~wdl~~-~~~~~~~~~--~h~~~v 264 (383)
.+.|+. ..++.++.|+ .|.+||+.+ ... ..... .|...+
T Consensus 215 ~~SpDg----~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~-~~~~~~~~~~~~~ 289 (741)
T 2ecf_A 215 WWAPDD----SAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT-QWIDLGKEQDIYL 289 (741)
T ss_dssp EECTTS----SCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC-EEECCCSCSSEEE
T ss_pred EECCCC----CEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce-EEecCCCCcceEE
Confidence 244432 1344444443 788899876 543 22221 466788
Q ss_pred EEEEEeCCCCceEEEEc-----CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcC-C
Q 016769 265 LCLSIDESCNGGISGGA-----DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR-K 338 (383)
Q Consensus 265 ~~~~~~~~~~~~~s~~~-----d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~-~ 338 (383)
..+.| +++..++.++. +..|.+||++..................+..++|+|||+++++++.|++++||.++ .
T Consensus 290 ~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~ 368 (741)
T 2ecf_A 290 ARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSK 368 (741)
T ss_dssp EEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSS
T ss_pred EEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCC
Confidence 99999 99998876553 56789999876543322211111111134678999999999999999999999876 4
Q ss_pred CceEEEecccccceeEE-EEeCCCCEEE-EEeCCC--cEEEEeCC
Q 016769 339 GSALAILKYHHATCNAV-SFSSDCKLMA-SASEDS--TVALWELY 379 (383)
Q Consensus 339 ~~~~~~~~~h~~~v~~v-~~spd~~~la-s~s~d~--~i~~w~~~ 379 (383)
++ ...+..|...+..+ +|+|||+.|+ +++.|+ .++||++.
T Consensus 369 ~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 369 GK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp SC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred CC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 55 77787888888887 5999999765 555565 89999874
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=8.8e-20 Score=171.14 Aligned_cols=188 Identities=13% Similarity=0.081 Sum_probs=128.5
Q ss_pred cCCCCCceeeeccCC--cceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCc-
Q 016769 165 VPAEGPKYMAVAGEQ--LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS- 241 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~--~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~- 241 (383)
++++|+. ++.++.. ...|++||+++++... +... ... ... ..|.|+. ...+++++.|+.
T Consensus 186 ~Spdg~~-la~~s~~~~~~~i~~~d~~tg~~~~-l~~~----------~~~--~~~-~~~spdg---~~la~~~~~~g~~ 247 (415)
T 2hqs_A 186 WSPDGSK-LAYVTFESGRSALVIQTLANGAVRQ-VASF----------PRH--NGA-PAFSPDG---SKLAFALSKTGSL 247 (415)
T ss_dssp ECTTSSE-EEEEECTTSSCEEEEEETTTCCEEE-EECC----------SSC--EEE-EEECTTS---SEEEEEECTTSSC
T ss_pred EcCCCCE-EEEEEecCCCcEEEEEECCCCcEEE-eecC----------CCc--ccC-EEEcCCC---CEEEEEEecCCCc
Confidence 3455553 4433332 2489999999887543 3211 111 111 1355542 223336666655
Q ss_pred -EEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc-CC--cEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC
Q 016769 242 -ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQ--KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 242 -i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~-d~--~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p 317 (383)
|.+||+++.. ...+..|...+..+.|++++..++.++. ++ .|.+||++... .. .+..+...+..++|+|
T Consensus 248 ~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~--~~---~l~~~~~~~~~~~~sp 320 (415)
T 2hqs_A 248 NLYVMDLASGQ--IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA--PQ---RITWEGSQNQDADVSS 320 (415)
T ss_dssp EEEEEETTTCC--EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--CE---ECCCSSSEEEEEEECT
T ss_pred eEEEEECCCCC--EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC--EE---EEecCCCcccCeEECC
Confidence 9999998743 3566778888999999999998887775 45 46666765432 11 1223445688999999
Q ss_pred CCcEEEEEeCC---CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCC---cEEEEeCC
Q 016769 318 DSKIAATAGWD---RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS---TVALWELY 379 (383)
Q Consensus 318 ~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~---~i~~w~~~ 379 (383)
+|++|+.++.+ ..|++||+.+++.. .+..|. .+.+++|+|||++|++++.|+ .|.+||+.
T Consensus 321 dG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 321 DGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp TSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 99999988865 68999999988764 455554 899999999999999998887 79999974
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.83 E-value=2.8e-17 Score=149.88 Aligned_cols=283 Identities=11% Similarity=0.084 Sum_probs=177.5
Q ss_pred ecCCceeeEEEeCCCCeEEEecC-------CCeEEEeeCcccccccccccccccceeeeeeecCCCCcc-eeEecccCCe
Q 016769 16 GHRASVTDVCFHQTKPILFAGTT-------GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDGT 87 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~-------D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~D~t 87 (383)
.+...+..++|+|++++|++++. ++.|.+||..+++....+... .....+.++++ ++ .+++...+++
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s~d--g~~l~v~~~~~~~ 112 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND---LKPFGATINNT--TQTLWFGNTVNSA 112 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES---SCCCSEEEETT--TTEEEEEETTTTE
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC---CCcceEEECCC--CCEEEEEecCCCE
Confidence 45567889999999998888774 568999999887655443322 23455677773 45 4566778899
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
|.+||.++++... .+.... ... . +.. .. .......+++
T Consensus 113 v~~~d~~~~~~~~----~~~~~~-----------~~~-------~------~~~------------~~--~~~~~~~~s~ 150 (353)
T 3vgz_A 113 VTAIDAKTGEVKG----RLVLDD-----------RKR-------T------EEV------------RP--LQPRELVADD 150 (353)
T ss_dssp EEEEETTTCCEEE----EEESCC-----------CCC-------C------SSC------------CC--CEEEEEEEET
T ss_pred EEEEeCCCCeeEE----EEecCC-----------Ccc-------c------ccc------------CC--CCCceEEECC
Confidence 9999998764211 110000 000 0 000 00 0000012335
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
+++.+++.....++.|.+||+++++.+..+..... .... + .+.++. ..++++..++.|.+||+
T Consensus 151 dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------~~~~--~---~~s~dg----~~l~~~~~~~~i~~~d~ 213 (353)
T 3vgz_A 151 ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK--------MSTG--L---ALDSEG----KRLYTTNADGELITIDT 213 (353)
T ss_dssp TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT--------TCCC--C---EEETTT----TEEEEECTTSEEEEEET
T ss_pred CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC--------ccce--E---EECCCC----CEEEEEcCCCeEEEEEC
Confidence 55543333324578899999999887766642110 0011 1 133322 24667778999999999
Q ss_pred CCCCCceeeeec----cccCeEEEEEeCCCCceEEEEc-CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEE
Q 016769 248 RNPGIPLTAMKV----HLEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 322 (383)
Q Consensus 248 ~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l 322 (383)
.+.. ....+.. +...+..+.+++++..++.++. ++.|.+||+....... ..... ....++|+|+++++
T Consensus 214 ~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~----~~~~~--~~~~~~~s~dg~~l 286 (353)
T 3vgz_A 214 ADNK-ILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA----KVAAP--ESLAVLFNPARNEA 286 (353)
T ss_dssp TTTE-EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE----EEECS--SCCCEEEETTTTEE
T ss_pred CCCe-EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE----EEEcC--CCceEEECCCCCEE
Confidence 8743 3333432 3445778999999987766655 5899999987543211 12222 23568999999965
Q ss_pred EEEe-CCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCC
Q 016769 323 ATAG-WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED 370 (383)
Q Consensus 323 ~s~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d 370 (383)
+.++ .+++|.+||+.+++.+..+... ..+.+++|+|||++|..+..+
T Consensus 287 ~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 287 YVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred EEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 5555 6999999999999988777644 467999999999966655554
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.83 E-value=7e-18 Score=152.74 Aligned_cols=282 Identities=7% Similarity=0.033 Sum_probs=171.1
Q ss_pred EEeCCCC-eEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeE-ecccCCeEEEeecCCCCCCCCC
Q 016769 25 CFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSNP 102 (383)
Q Consensus 25 ~f~~~~~-~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~D~ti~~Wd~~~~~~~~~~ 102 (383)
.|.+++. .+++.+.++.|++||..+++.......+ .... .++++++ ++.++ +...+++|.+||++++...
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~-~~~~s~d--g~~l~~~~~~~~~i~~~d~~~~~~~--- 75 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLG--YDFV-DTAITSD--CSNVVVTSDFCQTLVQIETQLEPPK--- 75 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECC--CCEE-EEEECSS--SCEEEEEESTTCEEEEEECSSSSCE---
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEcc--CCcc-eEEEcCC--CCEEEEEeCCCCeEEEEECCCCcee---
Confidence 4555554 5888999999999999887765544322 2234 7888884 55554 5556899999999876420
Q ss_pred eeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcc-
Q 016769 103 SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLS- 181 (383)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~- 181 (383)
...+ .....+ . . ...++++++ +++++...++
T Consensus 76 ~~~~----------~~~~~~----------~--------------------------~-~~~~s~dg~-~l~~~~~~~~~ 107 (331)
T 3u4y_A 76 VVAI----------QEGQSS----------M--------------------------A-DVDITPDDQ-FAVTVTGLNHP 107 (331)
T ss_dssp EEEE----------EECSSC----------C--------------------------C-CEEECTTSS-EEEECCCSSSS
T ss_pred EEec----------ccCCCC----------c--------------------------c-ceEECCCCC-EEEEecCCCCc
Confidence 0000 000000 0 0 012334554 3444433324
Q ss_pred -eEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCc-EEEEeCCCCCCceee---
Q 016769 182 -EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS-ILVWDIRNPGIPLTA--- 256 (383)
Q Consensus 182 -~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~-i~~wdl~~~~~~~~~--- 256 (383)
.|++||+++++.+..+.... ....+ .+.|+. ...++++..++. |.+|++...+.....
T Consensus 108 ~~i~v~d~~~~~~~~~~~~~~-----------~~~~~---~~spdg---~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 108 FNMQSYSFLKNKFISTIPIPY-----------DAVGI---AISPNG---NGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp CEEEEEETTTTEEEEEEECCT-----------TEEEE---EECTTS---SCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred ccEEEEECCCCCeEEEEECCC-----------Cccce---EECCCC---CEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 89999999988766554211 11111 244432 223555677788 999999864432111
Q ss_pred eeccccCeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEe-CCCcEEEE
Q 016769 257 MKVHLEPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG-WDRRVRIY 334 (383)
Q Consensus 257 ~~~h~~~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~-~dg~i~iw 334 (383)
...+......+.|++++..++.+ ..++.|.+||++........ ..+. ....+..++|+||+++++.++ .++.|.+|
T Consensus 171 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~-~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~ 248 (331)
T 3u4y_A 171 FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLL-NAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNF 248 (331)
T ss_dssp EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEE-EEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEE
T ss_pred cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccccee-eecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEE
Confidence 11223457889999999866554 46889999999765431101 1122 225678899999999766554 58899999
Q ss_pred EcCCCce--EEEeccc----ccc---eeEEEEeCCCCEEEE-EeCCCcEEEEeCCCC
Q 016769 335 NYRKGSA--LAILKYH----HAT---CNAVSFSSDCKLMAS-ASEDSTVALWELYPP 381 (383)
Q Consensus 335 d~~~~~~--~~~~~~h----~~~---v~~v~~spd~~~las-~s~d~~i~~w~~~~~ 381 (383)
|+.+++. +..+..+ ... ...++|+|||++|+. +..++.|++||+..+
T Consensus 249 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 249 NQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp ETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred ECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 9998876 3333222 222 245899999997755 555679999999754
No 134
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=3e-18 Score=178.82 Aligned_cols=196 Identities=10% Similarity=0.137 Sum_probs=133.0
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCc-CCCCCceeeEEEeec-CCCCCCceEEEEEeCCCc
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNF-SSKGRGMCMAVQAYL-PSKSQGFVNVLAGYEDGS 241 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~sg~~dg~ 241 (383)
.++++|+. ++.+ .++.|.+||+.... +..+..+.......+ .+...... ..+. |+. ..++.++ ++.
T Consensus 251 ~~SpDG~~-la~~--~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~---~~~S~pdG----~~la~~~-~~~ 318 (1045)
T 1k32_A 251 HLNTDGRR-ILFS--KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFA---EDFSPLDG----DLIAFVS-RGQ 318 (1045)
T ss_dssp EEEESSSC-EEEE--ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGE---EEEEECGG----GCEEEEE-TTE
T ss_pred eEcCCCCE-EEEE--eCCEEEEecCCceE-eeeeccCcccccccccccccccce---eeecCCCC----CEEEEEE-cCE
Confidence 34566654 3333 36789999994433 334432110000000 00001111 1345 542 1355555 889
Q ss_pred EEEEeCCCCCCceeeeecccc-CeEEEEEeCCCCceEEEEcCCcEE-EEEccCCCCeeEEeeeeecCCCCeEEEEECCCC
Q 016769 242 ILVWDIRNPGIPLTAMKVHLE-PVLCLSIDESCNGGISGGADQKIV-LYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319 (383)
Q Consensus 242 i~~wdl~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~s~~~d~~i~-~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 319 (383)
|.+|++.... ...+..|.. .+..+.|+ ++..++.++.++.+. +||++... .. .+..+...+..++|+|||
T Consensus 319 i~~~~~~~~~--~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~--~~---~l~~~~~~~~~~~~SpDG 390 (1045)
T 1k32_A 319 AFIQDVSGTY--VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK--AE---KFEENLGNVFAMGVDRNG 390 (1045)
T ss_dssp EEEECTTSSB--EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC--EE---ECCCCCCSEEEEEECTTS
T ss_pred EEEEcCCCCc--eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC--ce---EecCCccceeeeEECCCC
Confidence 9999987532 334556666 78889999 888888888877788 88876432 11 122344678999999999
Q ss_pred cEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCC----------cEEEEeCC
Q 016769 320 KIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS----------TVALWELY 379 (383)
Q Consensus 320 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~----------~i~~w~~~ 379 (383)
++|++++.++.|++||+.+++......+|...+.+++|||||++|++++.++ .|++||+.
T Consensus 391 ~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 391 KFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred CEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 9999999999999999999988877778999999999999999999888754 89999985
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.82 E-value=3.7e-18 Score=160.03 Aligned_cols=266 Identities=11% Similarity=0.070 Sum_probs=175.0
Q ss_pred eeeeecCCceeeEEEeC--------------CCCeEEEecCC------CeEEEeeCcccccccccccccccceeeeeeec
Q 016769 12 AVLRGHRASVTDVCFHQ--------------TKPILFAGTTG------GELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71 (383)
Q Consensus 12 ~~l~gH~~~V~~v~f~~--------------~~~~L~sgs~D------~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (383)
..+.+|...|+.+++++ .+..|+.++.+ +.|++||..+ .....+..|. ..+.+++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~--~~v~~~~~S 187 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSP--QPLMSPAWS 187 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEES--SCEEEEEEC
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCC--CcceeeEEc
Confidence 45889999999998875 15566666665 7999999874 3344443333 457888999
Q ss_pred CCCCcceeEecccCC---eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCc
Q 016769 72 PSIGLNKVISQGRDG---TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS 148 (383)
Q Consensus 72 ~~~~~~~l~s~~~D~---ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (383)
| +++++++++.|+ +|++||+++++.. .+..+ ..
T Consensus 188 p--dg~~la~~s~~~~~~~i~~~d~~tg~~~-----~l~~~------------~~------------------------- 223 (415)
T 2hqs_A 188 P--DGSKLAYVTFESGRSALVIQTLANGAVR-----QVASF------------PR------------------------- 223 (415)
T ss_dssp T--TSSEEEEEECTTSSCEEEEEETTTCCEE-----EEECC------------SS-------------------------
T ss_pred C--CCCEEEEEEecCCCcEEEEEECCCCcEE-----EeecC------------CC-------------------------
Confidence 8 468888888775 9999999876421 00000 00
Q ss_pred cccccccCCccceecccCCCCCceeeeccCC--cceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCC
Q 016769 149 LCDSKESNRSFEIIDDVPAEGPKYMAVAGEQ--LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK 226 (383)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 226 (383)
......++++|+. ++.+++. +..|++||+++++. ..+... .... .. ..|.|+.
T Consensus 224 ----------~~~~~~~spdg~~-la~~~~~~g~~~i~~~d~~~~~~-~~l~~~----------~~~~--~~-~~~spdg 278 (415)
T 2hqs_A 224 ----------HNGAPAFSPDGSK-LAFALSKTGSLNLYVMDLASGQI-RQVTDG----------RSNN--TE-PTWFPDS 278 (415)
T ss_dssp ----------CEEEEEECTTSSE-EEEEECTTSSCEEEEEETTTCCE-EECCCC----------SSCE--EE-EEECTTS
T ss_pred ----------cccCEEEcCCCCE-EEEEEecCCCceEEEEECCCCCE-EeCcCC----------CCcc--cc-eEECCCC
Confidence 0001123455553 4433333 34699999988764 333221 1111 11 1355542
Q ss_pred CCCceEEEEEeC-CC--cEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcC---CcEEEEEccCCCCeeEEe
Q 016769 227 SQGFVNVLAGYE-DG--SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD---QKIVLYNLDHSTGSCVIK 300 (383)
Q Consensus 227 ~~~~~~~~sg~~-dg--~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d---~~i~~wdl~~~~~~~~~~ 300 (383)
..++.++. ++ .|.+||+.+.. ...+..|...+..+.|+++++.++.++.+ ..|.+||++.... .
T Consensus 279 ----~~l~~~s~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~--~-- 348 (415)
T 2hqs_A 279 ----QNLAFTSDQAGRPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--Q-- 348 (415)
T ss_dssp ----SEEEEEECTTSSCEEEEEETTSSC--CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--E--
T ss_pred ----CEEEEEECCCCCcEEEEEECCCCC--EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE--E--
Confidence 24555554 45 67777887643 33455566778899999999988877764 5799999875432 1
Q ss_pred eeeecCCCCeEEEEECCCCcEEEEEeCCC---cEEEEEcCCCceEEEecccccceeEEEEeCCCC
Q 016769 301 KEINLERPGISGTSIRPDSKIAATAGWDR---RVRIYNYRKGSALAILKYHHATCNAVSFSSDCK 362 (383)
Q Consensus 301 ~~~~~~~~~i~~~~~~p~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~ 362 (383)
.+..+ ..+.+++|+||+++|+.++.|+ .|++||+. ++....+..|...|.+++|+|.-.
T Consensus 349 -~l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 349 -VLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp -ECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred -EecCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 12222 3688999999999999998887 79999996 555677888999999999999754
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=8.4e-18 Score=148.83 Aligned_cols=244 Identities=11% Similarity=-0.000 Sum_probs=158.9
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcc-cccccccccccccceeeeeeecCCCCcceeEecc--cCC
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG--RDG 86 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~--~D~ 86 (383)
....+.+|.+.|.+++|+|++++|++++ ++.|++||+.+ ++.......+ ....+..+.+++ ++..+++++ .++
T Consensus 33 ~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~sp--dg~~l~~~~~~~~~ 108 (297)
T 2ojh_A 33 KMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGF-ATICNNDHGISP--DGALYAISDKVEFG 108 (297)
T ss_dssp EEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTT-CCCBCSCCEECT--TSSEEEEEECTTTS
T ss_pred ceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccc-ccccccceEECC--CCCEEEEEEeCCCC
Confidence 3446778999999999999999999976 88999999987 6544332222 123456678887 467777766 445
Q ss_pred eEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 87 ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
..++|.++.... . ...
T Consensus 109 ~~~l~~~~~~~~--~-~~~------------------------------------------------------------- 124 (297)
T 2ojh_A 109 KSAIYLLPSTGG--T-PRL------------------------------------------------------------- 124 (297)
T ss_dssp SCEEEEEETTCC--C-CEE-------------------------------------------------------------
T ss_pred cceEEEEECCCC--c-eEE-------------------------------------------------------------
Confidence 666666532100 0 000
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
+.... . +. . ..+.|+ +...++++..|+.++||+
T Consensus 125 -------~~~~~--~-~~-------------------------------~---~~~spd---g~~l~~~~~~~~~~~l~~ 157 (297)
T 2ojh_A 125 -------MTKNL--P-SY-------------------------------W---HGWSPD---GKSFTYCGIRDQVFDIYS 157 (297)
T ss_dssp -------CCSSS--S-EE-------------------------------E---EEECTT---SSEEEEEEEETTEEEEEE
T ss_pred -------eecCC--C-cc-------------------------------c---eEECCC---CCEEEEEECCCCceEEEE
Confidence 00000 0 00 0 001111 111233566677788887
Q ss_pred CCCCCCceeeeeccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE
Q 016769 247 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 247 l~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
+.........+..|...+.++.|++++..++.++ .++.+++|+++....... .+..+...+..++|+|++++|+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 158 MDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVE---RITDSAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp EETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEE---ECCCCSEEEEEEEECTTSSEEEEE
T ss_pred EECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcE---EEecCCcccCCeEECCCCCEEEEE
Confidence 5432223444556667889999999998777665 589999999874333221 222334567889999999999888
Q ss_pred eCC-----------CcEEEEEcCCCce--EEEecccccceeEEEEeCCCCEEEEEeCCC
Q 016769 326 GWD-----------RRVRIYNYRKGSA--LAILKYHHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 326 ~~d-----------g~i~iwd~~~~~~--~~~~~~h~~~v~~v~~spd~~~las~s~d~ 371 (383)
+.+ +.|++||+.+++. +..+.+|...+.+++|+||+++|++++.|.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 876 5699999988765 344457888899999999999988887664
No 137
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.81 E-value=1.8e-18 Score=169.30 Aligned_cols=270 Identities=11% Similarity=0.049 Sum_probs=174.3
Q ss_pred CCceeeEEEeCCCCeEEEecC-CCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEeccc---CCeEEEeec
Q 016769 18 RASVTDVCFHQTKPILFAGTT-GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR---DGTVKCWDI 93 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~-D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~---D~ti~~Wd~ 93 (383)
..+|++++|+|||++||+++. ||+++||++.+++.. .+..+ ....+..+.++| + ..+++++. +...++|.+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~-~~~~~~~~~~sp--d-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNRE-PINSVLDPHYGV--G-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSS-CCSEECEECTTC--S-EEEEEEECSTTSCCEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecc-cccccccccCCC--C-eEEEEeccCCCCcceEEEEE
Confidence 568999999999999999888 999999998554432 22222 113566778887 3 55665543 566777766
Q ss_pred CC--CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCc
Q 016769 94 EN--GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPK 171 (383)
Q Consensus 94 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (383)
.. ... . ..+..... .. ...+++++..
T Consensus 96 ~~~~~g~--~--~~l~~~~~-----------------------------------------------~~-~~~~s~dg~~ 123 (582)
T 3o4h_A 96 NTSRPGE--E--QRLEAVKP-----------------------------------------------MR-ILSGVDTGEA 123 (582)
T ss_dssp ETTSTTC--C--EECTTSCS-----------------------------------------------BE-EEEEEECSSC
T ss_pred eccCCCc--c--ccccCCCC-----------------------------------------------ce-eeeeCCCCCe
Confidence 43 110 0 00000000 00 1123455555
Q ss_pred eeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCC----CcEEEEeC
Q 016769 172 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED----GSILVWDI 247 (383)
Q Consensus 172 ~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~d----g~i~~wdl 247 (383)
.+++++..++ +.+||+++++......... .. ..+.|+. ..+++++.| +.|++||+
T Consensus 124 ~~~~s~~~~~-~~l~d~~~g~~~~l~~~~~-------------~~---~~~spDG----~~la~~~~~~~~~~~i~~~d~ 182 (582)
T 3o4h_A 124 VVFTGATEDR-VALYALDGGGLRELARLPG-------------FG---FVSDIRG----DLIAGLGFFGGGRVSLFTSNL 182 (582)
T ss_dssp EEEEEECSSC-EEEEEEETTEEEEEEEESS-------------CE---EEEEEET----TEEEEEEEEETTEEEEEEEET
T ss_pred EEEEecCCCC-ceEEEccCCcEEEeecCCC-------------ce---EEECCCC----CEEEEEEEcCCCCeEEEEEcC
Confidence 5555555544 4599998876433222110 01 1233432 235555555 78999998
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCC--cEEEEEccCCCCeeEEeeeeecCCCCeEEEE--------ECC
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ--KIVLYNLDHSTGSCVIKKEINLERPGISGTS--------IRP 317 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~--~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~--------~~p 317 (383)
.++. ...+..|...+..+.|+|+++.++++..++ .|.+||++..... ....+...+..++ |+|
T Consensus 183 ~~g~--~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~sp 255 (582)
T 3o4h_A 183 SSGG--LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-----DLELPSKDFSSYRPTAITWLGYLP 255 (582)
T ss_dssp TTCC--CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-----ECCCSCSHHHHHCCSEEEEEEECT
T ss_pred CCCC--ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-----EccCCCcChhhhhhccccceeEcC
Confidence 8644 345677888889999999999999888888 7899998754322 1222333444455 999
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCc---EEEEeC
Q 016769 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST---VALWEL 378 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~---i~~w~~ 378 (383)
||+++++++.|+++++|++ ++... .+...+.+++|+ |++++++++.+.. +.+||.
T Consensus 256 dg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 256 DGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp TSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred CCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 9999999999999999999 65443 344678899999 9999999888754 555554
No 138
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.80 E-value=5.3e-17 Score=148.17 Aligned_cols=117 Identities=8% Similarity=0.070 Sum_probs=85.6
Q ss_pred CeEEEEEeCCCCceEE-EEcCCcEEEEEccCCCCeeEEeeeeecCC------CCeEEEEECCCCcEE-EEEeCCCcEEEE
Q 016769 263 PVLCLSIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKKEINLER------PGISGTSIRPDSKIA-ATAGWDRRVRIY 334 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s-~~~d~~i~~wdl~~~~~~~~~~~~~~~~~------~~i~~~~~~p~~~~l-~s~~~dg~i~iw 334 (383)
....+.|+++++.++. +..++.+.+|+++..++............ ..+..++|+|||++| ++...+++|.+|
T Consensus 188 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~ 267 (347)
T 3hfq_A 188 GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVF 267 (347)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEE
T ss_pred CCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEE
Confidence 4557899999986655 45688999999986555433222222211 347889999999977 556679999999
Q ss_pred EcCC---CceEEEecccccceeEEEEeCCCCEEEEEeCC-CcEEEEeCC
Q 016769 335 NYRK---GSALAILKYHHATCNAVSFSSDCKLMASASED-STVALWELY 379 (383)
Q Consensus 335 d~~~---~~~~~~~~~h~~~v~~v~~spd~~~las~s~d-~~i~~w~~~ 379 (383)
|+.. .+.+..+..+...+..++|+|||++|++++.+ +.|.+|++.
T Consensus 268 ~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 268 AVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 9973 24455565666678999999999988877765 899999774
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.80 E-value=5e-17 Score=147.02 Aligned_cols=271 Identities=11% Similarity=0.096 Sum_probs=165.9
Q ss_pred CeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcce-eEecccCCeEEEeecCCCCCCCCCeeeeecC
Q 016769 31 PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNK-VISQGRDGTVKCWDIENGGLSSNPSLTIKTN 109 (383)
Q Consensus 31 ~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~ 109 (383)
++|++++.|+.|++||..+++.+..+...........++++++ ++. +++++.+++|.+||+.+++... .+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~v~~~~~~~v~~~d~~~~~~~~----~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPG--GRIAYATVNKSESLVKIDLVTGETLG----RIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTT--SSEEEEEETTTTEEEEEETTTCCEEE----EEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCC--CCEEEEEeCCCCeEEEEECCCCCeEe----eEEcC
Confidence 4799999999999999987766544332110002456778874 444 4677788999999998764210 01000
Q ss_pred ceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeecc--------C---
Q 016769 110 SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAG--------E--- 178 (383)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------~--- 178 (383)
...... .. .....++++++. ++++. .
T Consensus 76 -----------~~~~~~---~~----------------------------~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~ 112 (337)
T 1pby_B 76 -----------TPEERV---KS----------------------------LFGAALSPDGKT-LAIYESPVRLELTHFEV 112 (337)
T ss_dssp -----------BTTEEE---EC----------------------------TTCEEECTTSSE-EEEEEEEEEECSSCEEE
T ss_pred -----------Cccccc---cc----------------------------ccceEECCCCCE-EEEEecccccccccccc
Confidence 000000 00 000112344433 33332 0
Q ss_pred CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeee
Q 016769 179 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK 258 (383)
Q Consensus 179 ~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~ 258 (383)
.++.|.+||+.+++.+..+.....+ . .+ .+.|+. . .++++ ++.|.+||+++.. ....+.
T Consensus 113 ~~~~i~v~d~~~~~~~~~~~~~~~~---------~--~~---~~s~dg---~-~l~~~--~~~i~~~d~~~~~-~~~~~~ 171 (337)
T 1pby_B 113 QPTRVALYDAETLSRRKAFEAPRQI---------T--ML---AWARDG---S-KLYGL--GRDLHVMDPEAGT-LVEDKP 171 (337)
T ss_dssp CCCEEEEEETTTTEEEEEEECCSSC---------C--CE---EECTTS---S-CEEEE--SSSEEEEETTTTE-EEEEEC
T ss_pred cCceEEEEECCCCcEEEEEeCCCCc---------c--ee---EECCCC---C-EEEEe--CCeEEEEECCCCc-Eeeeee
Confidence 3579999999988766555421110 1 11 133432 1 24444 6899999998743 333443
Q ss_pred ccc--cCeEEEEEeCCCCceEEEEc-CC-----------------------cEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 259 VHL--EPVLCLSIDESCNGGISGGA-DQ-----------------------KIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 259 ~h~--~~v~~~~~~~~~~~~~s~~~-d~-----------------------~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
.+. .++ .+++++..++..+. ++ .|.+||+...... ......+...+.+
T Consensus 172 ~~~~~~~~---~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~~~~~~ 245 (337)
T 1pby_B 172 IQSWEAET---YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA---MREVRIMDVFYFS 245 (337)
T ss_dssp STTTTTTT---BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE---EEEEEECSSCEEE
T ss_pred ccccCCCc---eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce---EeecCCCCCceee
Confidence 332 222 45666654433322 22 4678888754322 2223334456788
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
++|+|++++++++ ++.|++||+.+++.+..+.. ...+.+++|+|||++|++++.|+.|++||+..
T Consensus 246 ~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 246 TAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp EEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred EEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 9999999998887 79999999999988877753 34678999999999999999999999999853
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.80 E-value=9.4e-18 Score=168.23 Aligned_cols=295 Identities=8% Similarity=0.020 Sum_probs=170.1
Q ss_pred CceeeEEEeCCCCeEEEecCCCeEEEeeCccccccccccccccc-ceeeeeeecCCCCcceeEecccC---------CeE
Q 016769 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA-HGIVSVATGPSIGLNKVISQGRD---------GTV 88 (383)
Q Consensus 19 ~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~s~~~D---------~ti 88 (383)
..+.+++|+|||++|++ +.||+|++||+.++++...+..+... ..+..++++| ++++|++++.+ +++
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~Sp--Dg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISP--DREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECT--TSSEEEEEESCCCCSSSCCCSEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECC--CCCEEEEEecCccceeecceeeE
Confidence 34678999999998877 78999999999887665443322210 1367889998 47888877654 788
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
.+||+++++.. .+... . ... .......++++
T Consensus 94 ~~~d~~~~~~~-----~l~~~------------~--------~~~------------------------~~~~~~~~SPd 124 (723)
T 1xfd_A 94 VLSKIPHGDPQ-----SLDPP------------E--------VSN------------------------AKLQYAGWGPK 124 (723)
T ss_dssp EEEESSSCCCE-----ECCCT------------T--------CCS------------------------CCCSBCCBCSS
T ss_pred EEEECCCCceE-----eccCC------------c--------ccc------------------------ccccccEECCC
Confidence 89999876420 00000 0 000 00001235577
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCC-CCCcCC-------CCCceeeEEEeecCCCCCCceEEEEEeCC-
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGG-SPNFSS-------KGRGMCMAVQAYLPSKSQGFVNVLAGYED- 239 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~-s~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~sg~~d- 239 (383)
|+.+..++ . +.|++||+.+++............ ...... .+.. ....|+|+. ..++.++.|
T Consensus 125 G~~la~~~-~--~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~---~~~~~SpDg----~~la~~~~~~ 194 (723)
T 1xfd_A 125 GQQLIFIF-E--NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH---IAHWWSPDG----TRLAYAAIND 194 (723)
T ss_dssp TTCEEEEE-T--TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS---EEEEECTTS----SEEEEEEEEC
T ss_pred CCEEEEEE-C--CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc---ceEEECCCC----CEEEEEEECC
Confidence 76543332 2 689999999877543332211000 000000 0000 011244432 124443322
Q ss_pred ---------------------------------CcEEEEeCCCCCCceeeeecc------ccCeEEEEEeCCCCceEEEE
Q 016769 240 ---------------------------------GSILVWDIRNPGIPLTAMKVH------LEPVLCLSIDESCNGGISGG 280 (383)
Q Consensus 240 ---------------------------------g~i~~wdl~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~~s~~ 280 (383)
.+|++||+.+... ...+..+ ...+..+.|++++..+++..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~-~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~ 273 (723)
T 1xfd_A 195 SRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH-DLEMMPPDDPRMREYYITMVKWATSTKVAVTWL 273 (723)
T ss_dssp TTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEE
T ss_pred CccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce-eEEeeCCccCCCccceeEEEEEeCCCeEEEEEE
Confidence 2799999987542 2334433 56788999999998776654
Q ss_pred c----CCcEEEEEccCCCCeeEEeeeeecCCCCe----EEEEECCCCcEEEE--EeCCC------cEEEEEc-CCCce--
Q 016769 281 A----DQKIVLYNLDHSTGSCVIKKEINLERPGI----SGTSIRPDSKIAAT--AGWDR------RVRIYNY-RKGSA-- 341 (383)
Q Consensus 281 ~----d~~i~~wdl~~~~~~~~~~~~~~~~~~~i----~~~~~~p~~~~l~s--~~~dg------~i~iwd~-~~~~~-- 341 (383)
. +..|.+||++.......... .+...+ ..++|+|||+.|+. +..++ .|.+||+ ..++.
T Consensus 274 ~~~~~~~~i~~~d~~~g~~~~~~~~---~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 350 (723)
T 1xfd_A 274 NRAQNVSILTLCDATTGVCTKKHED---ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDN 350 (723)
T ss_dssp ETTSCEEEEEEEETTTCCEEEEEEE---ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCC
T ss_pred cCCCCeEEEEEEeCCCCcceEEEEe---ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccc
Confidence 3 35688999875542222211 111222 37899999996664 45677 4666673 33331
Q ss_pred EEEecccccceeE-EEEeCCCCEEEEEeCC---CcEEEEeCC
Q 016769 342 LAILKYHHATCNA-VSFSSDCKLMASASED---STVALWELY 379 (383)
Q Consensus 342 ~~~~~~h~~~v~~-v~~spd~~~las~s~d---~~i~~w~~~ 379 (383)
...+..+...+.. ++|+|||+.|+..+.+ +.++||++.
T Consensus 351 ~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 351 IQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp CCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred eeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 4444433444544 6999999988766555 789999985
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.78 E-value=5e-17 Score=169.54 Aligned_cols=292 Identities=12% Similarity=0.099 Sum_probs=190.5
Q ss_pred eeeeeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcc-cccccccccccccceeeeeeecCCCCcceeEecccCCeEE
Q 016769 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (383)
Q Consensus 11 ~~~l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~ 89 (383)
...+.+|.+.|.+++|+++ .++++++.|++++||.+.. +.....+..+. .+...+++| ++..++.+ .++.|.
T Consensus 196 ~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~---~~~~~~~Sp--DG~~la~~-~~~~i~ 268 (1045)
T 1k32_A 196 FKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT---DYYPRHLNT--DGRRILFS-KGGSIY 268 (1045)
T ss_dssp EEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC---SSCEEEEEE--SSSCEEEE-ETTEEE
T ss_pred eEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC---CcceeeEcC--CCCEEEEE-eCCEEE
Confidence 3456899999999999999 7888889999999998653 22222222222 234557777 45667766 589999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC-CC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP-AE 168 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 168 (383)
+||++.... ..+.. ... .......... .......++ ++
T Consensus 269 ~~d~~~~~l-----~~l~~-------------~~~-------~~~~~~~~~~----------------~~v~~~~~S~pd 307 (1045)
T 1k32_A 269 IFNPDTEKI-----EKIEI-------------GDL-------ESPEDRIISI----------------PSKFAEDFSPLD 307 (1045)
T ss_dssp EECTTTCCE-----EECCC-------------CCC-------CBCCSEEEEC----------------GGGGEEEEEECG
T ss_pred EecCCceEe-----eeecc-------------Ccc-------cccccccccc----------------cccceeeecCCC
Confidence 999843210 00000 000 0000000000 000112344 55
Q ss_pred CCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE-EEeC
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL-VWDI 247 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~-~wdl 247 (383)
|+. ++.+. ++.+.+|++.++... .+... ... .... ..|. +...++.++.++.+. +||+
T Consensus 308 G~~-la~~~--~~~i~~~~~~~~~~~-~~~~~----------~~~-~~~~-~~~s-----dg~~l~~~s~~~~l~~~~d~ 366 (1045)
T 1k32_A 308 GDL-IAFVS--RGQAFIQDVSGTYVL-KVPEP----------LRI-RYVR-RGGD-----TKVAFIHGTREGDFLGIYDY 366 (1045)
T ss_dssp GGC-EEEEE--TTEEEEECTTSSBEE-ECSCC----------SCE-EEEE-ECSS-----SEEEEEEEETTEEEEEEEET
T ss_pred CCE-EEEEE--cCEEEEEcCCCCceE-EccCC----------Ccc-eEEe-eeEc-----CCCeEEEEECCCceEEEEEC
Confidence 543 33333 578999999876532 22210 010 0011 1122 123566777788888 8898
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW 327 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~ 327 (383)
.... ...+..|...+..+.|++++..+++++.++.|++||++...... ....+...+..++|+|||++|++++.
T Consensus 367 ~~~~--~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~----~~~~~~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 367 RTGK--AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV----IERSREAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp TTCC--EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE----EEECSSSCCCCEEECTTSCEEEEEEE
T ss_pred CCCC--ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEE----eccCCCCCccceEECCCCCeEEEEec
Confidence 7633 23344677889999999999999999999999999997543221 22235566789999999999998887
Q ss_pred CC----------cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 328 DR----------RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 328 dg----------~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
++ .|++||+.+++ ...+..|...+.+++|+|||++|++++.++..++|+.
T Consensus 441 ~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 441 LKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp ECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred CccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 54 99999999887 6677788888999999999999999999988888875
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.76 E-value=1e-15 Score=138.62 Aligned_cols=276 Identities=11% Similarity=0.109 Sum_probs=161.6
Q ss_pred eecCCceeeEEEeCCCCeEEEecCC-CeEEEeeCc--cccc--ccccccccccceeeeeeecCCCCcceeE-ecccCCeE
Q 016769 15 RGHRASVTDVCFHQTKPILFAGTTG-GELRIWDTV--QHRT--VSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTV 88 (383)
Q Consensus 15 ~gH~~~V~~v~f~~~~~~L~sgs~D-~~v~vW~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~D~ti 88 (383)
..|...+.+++|+|++++|++++.+ +.|++|++. +++. +..+.. ......++++++ ++.++ ++..+++|
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~d--g~~l~~~~~~~~~i 108 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL---PGSLTHISTDHQ--GQFVFVGSYNAGNV 108 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC---SSCCSEEEECTT--SSEEEEEETTTTEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc---CCCCcEEEEcCC--CCEEEEEecCCCeE
Confidence 4688899999999999998888887 999999986 3332 212111 124567788873 56565 45568999
Q ss_pred EEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCC
Q 016769 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAE 168 (383)
Q Consensus 89 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (383)
++||++++.. .. ......... . .....++++
T Consensus 109 ~~~d~~~~~~-----~~---------~~~~~~~~~----------~-------------------------~~~~~~s~d 139 (343)
T 1ri6_A 109 SVTRLEDGLP-----VG---------VVDVVEGLD----------G-------------------------CHSANISPD 139 (343)
T ss_dssp EEEEEETTEE-----EE---------EEEEECCCT----------T-------------------------BCCCEECTT
T ss_pred EEEECCCCcc-----cc---------ccccccCCC----------C-------------------------ceEEEECCC
Confidence 9999853210 00 000000000 0 000123344
Q ss_pred CCceeeeccCCcceEEEEecCC-CCeee----EeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNT-AERCT----RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~-~~~~~----~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
++ ++++++..++.|++||+.+ ++... .+... .......+ .+.|+ +...++++..++.|.
T Consensus 140 g~-~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~---------~~~~~~~~---~~~pd---g~~l~~~~~~~~~i~ 203 (343)
T 1ri6_A 140 NR-TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTV---------EGAGPRHM---VFHPN---EQYAYCVNELNSSVD 203 (343)
T ss_dssp SS-EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECS---------TTCCEEEE---EECTT---SSEEEEEETTTTEEE
T ss_pred CC-EEEEecCCCCEEEEEEecCCCceeeecccccccC---------CCCCcceE---EECCC---CCEEEEEeCCCCEEE
Confidence 44 4555554678999999987 44321 11110 00011111 24443 222344566899999
Q ss_pred EEeCCCC-CCc--eeeee---cc---ccCeEEEEEeCCCCceEE-EEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEE
Q 016769 244 VWDIRNP-GIP--LTAMK---VH---LEPVLCLSIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGT 313 (383)
Q Consensus 244 ~wdl~~~-~~~--~~~~~---~h---~~~v~~~~~~~~~~~~~s-~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~ 313 (383)
+||+... +.. ..... .. ...+..+.|++++..++. +..++.|.+||++..++............ .+..+
T Consensus 204 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~ 282 (343)
T 1ri6_A 204 VWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTET-QPRGF 282 (343)
T ss_dssp EEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSS-SCCCE
T ss_pred EEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCC-ccceE
Confidence 9999642 111 11111 11 224567999999987764 44789999999985333333222333333 38899
Q ss_pred EECCCCcEEEEEe-CCCcEEEEEcC--CCc--eEEEecccccceeEEEEeCCCC
Q 016769 314 SIRPDSKIAATAG-WDRRVRIYNYR--KGS--ALAILKYHHATCNAVSFSSDCK 362 (383)
Q Consensus 314 ~~~p~~~~l~s~~-~dg~i~iwd~~--~~~--~~~~~~~h~~~v~~v~~spd~~ 362 (383)
+|+|+++++++++ .++.|.+|+++ +++ .+..+.. .....+++|.|+.+
T Consensus 283 ~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 283 NVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAHEG 335 (343)
T ss_dssp EECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEEC-
T ss_pred EECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcccC
Confidence 9999999888887 68999999654 553 2333432 24567788887654
No 143
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.75 E-value=4.4e-15 Score=136.18 Aligned_cols=200 Identities=11% Similarity=0.103 Sum_probs=122.4
Q ss_pred ceeeeccCCcceEEEEecCCCCeeeEecc----CcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEe
Q 016769 171 KYMAVAGEQLSEVEIWDLNTAERCTRLHQ----NSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 246 (383)
Q Consensus 171 ~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~----~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wd 246 (383)
++++++...++.+.+|++.....+..+.. ......+.........++ .+.|+ +...++++..++.|.+|+
T Consensus 110 ~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~spd---g~~l~~~~~~~~~v~v~~ 183 (361)
T 3scy_A 110 KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCV---RITPD---GKYLLADDLGTDQIHKFN 183 (361)
T ss_dssp SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEE---EECTT---SSEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEE---EECCC---CCEEEEEeCCCCEEEEEE
Confidence 34566666678999999976443322211 000000000000111111 34443 222345566689999999
Q ss_pred CCCCCC------ce-----eee-eccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeeeee---cCCCCe
Q 016769 247 IRNPGI------PL-----TAM-KVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEIN---LERPGI 310 (383)
Q Consensus 247 l~~~~~------~~-----~~~-~~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~~---~~~~~i 310 (383)
+..... .. ... ..+......+.|+++++.+++++ .++.|.+|+++.. ......... .+....
T Consensus 184 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g--~~~~~~~~~~~~~~~~~~ 261 (361)
T 3scy_A 184 INPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG--MLDEIQTVAADTVNAQGS 261 (361)
T ss_dssp ECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT--EEEEEEEEESCSSCCCCE
T ss_pred EcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC--ceEEeEEEecCCCCCCCc
Confidence 875431 11 111 12334567899999998877766 6899999999743 221111121 122456
Q ss_pred EEEEECCCCcEEEEEeCC--CcEEEEEcC--CCc--eEEEecccccceeEEEEeCCCCEEEEEe-CCCcEEEEeCC
Q 016769 311 SGTSIRPDSKIAATAGWD--RRVRIYNYR--KGS--ALAILKYHHATCNAVSFSSDCKLMASAS-EDSTVALWELY 379 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~d--g~i~iwd~~--~~~--~~~~~~~h~~~v~~v~~spd~~~las~s-~d~~i~~w~~~ 379 (383)
..++|+||+++|+++..+ ++|.+|+++ +++ .+..+.. ...+..++|+|||++|++++ .++.|.+|++.
T Consensus 262 ~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 262 GDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 799999999988776654 899999996 344 3334433 45678999999999888877 67999998774
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.75 E-value=2.3e-16 Score=157.75 Aligned_cols=140 Identities=10% Similarity=0.058 Sum_probs=97.3
Q ss_pred CCCcEEEEeCCCCCCceeee--eccccCeEEEEEeCCCCceEEEEcCC-----cEEEEEccCCCCeeEEeeee-ecCCCC
Q 016769 238 EDGSILVWDIRNPGIPLTAM--KVHLEPVLCLSIDESCNGGISGGADQ-----KIVLYNLDHSTGSCVIKKEI-NLERPG 309 (383)
Q Consensus 238 ~dg~i~~wdl~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~s~~~d~-----~i~~wdl~~~~~~~~~~~~~-~~~~~~ 309 (383)
.+..|.+||+.++.. .... ..|...+..+.|+++++.+++++.++ .|.+||+........+.... ......
T Consensus 233 ~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 233 HHVTVGIYHLATGKT-VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp CEEEEEEEETTTTEE-EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred CeeEEEEEECCCCce-EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 456799999986432 2211 24556789999999999888877775 89999987542111111111 111112
Q ss_pred eEEEEECC--CCcEEEEEeCCCcEEEEEcC-CCceEEEecccccceeE-EEEeCCCCEEEEEeC-CC----cEEEEeC
Q 016769 310 ISGTSIRP--DSKIAATAGWDRRVRIYNYR-KGSALAILKYHHATCNA-VSFSSDCKLMASASE-DS----TVALWEL 378 (383)
Q Consensus 310 i~~~~~~p--~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~-v~~spd~~~las~s~-d~----~i~~w~~ 378 (383)
+..++|+| |++++++++.|+.++||+++ +++.+..+..|...+.. ++|+|||+.|+.++. ++ .|..||+
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred cCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 46789999 99999999999999999986 67777788888877876 799999997765544 44 4555554
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.75 E-value=1.7e-16 Score=159.64 Aligned_cols=296 Identities=9% Similarity=0.008 Sum_probs=170.9
Q ss_pred ceeeEEEeCCCCeEEEecCCCeEEEeeCcccc--cccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCC
Q 016769 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (383)
Q Consensus 20 ~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~ 97 (383)
.|.+++|||||++|++++. +.|++||+.+++ .+..+..+ ...+..+.++| ++++++.++ +++|.+||+++++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~--~~~~~~~~~SP--DG~~la~~~-~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHG--EGFATDAKLSP--KGGFVSFIR-GRNLWVIDLASGR 183 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCS--SSCEEEEEECT--TSSEEEEEE-TTEEEEEETTTTE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccC--CcccccccCCC--CCCEEEEEe-CCcEEEEecCCCC
Confidence 4899999999999999887 999999998762 33333222 23467788998 467777766 4699999998763
Q ss_pred CCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeecc
Q 016769 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAG 177 (383)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 177 (383)
... +....... +.... ...+...+.+ ......++++|+.++.++.
T Consensus 184 ~~~-----~~~~~~~~----~~~g~---------~~~v~~~~~~-----------------~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 184 QMQ-----LTADGSTT----IGNGI---------AEFVADEEMD-----------------RHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp EEE-----CCCCCCSS----EEESC---------CCHHHHHHSC-----------------CCCSEEECTTSSCEEEEEE
T ss_pred EEE-----eccCCccc----eeccc---------cceeeeeccc-----------------cccceEECCCCCEEEEEEE
Confidence 211 00000000 00000 0000000000 0000123344432222211
Q ss_pred -----------------------------CC--cceEEEEecCC-CCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCC
Q 016769 178 -----------------------------EQ--LSEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPS 225 (383)
Q Consensus 178 -----------------------------~~--~~~i~~Wdl~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 225 (383)
.. ...|++||+.+ ++....... ......... ..| |+
T Consensus 229 d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~----------~~~~~~~~~-~~~-pD 296 (741)
T 2ecf_A 229 DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLG----------KEQDIYLAR-VNW-RD 296 (741)
T ss_dssp ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCC----------SCSSEEEEE-EEE-EE
T ss_pred cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCC----------CCcceEEEE-EEe-CC
Confidence 11 11688899988 664322111 000111111 134 54
Q ss_pred CCCCceEEEEEe-----CCCcEEEEeCCCCCCceeeeecccc----CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCe
Q 016769 226 KSQGFVNVLAGY-----EDGSILVWDIRNPGIPLTAMKVHLE----PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGS 296 (383)
Q Consensus 226 ~~~~~~~~~sg~-----~dg~i~~wdl~~~~~~~~~~~~h~~----~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~ 296 (383)
. . .++.++ .+..|.+||+.++. ....+..+.. .+..+.|++++..+++++.|+.++||.++....
T Consensus 297 g---~-~l~~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~- 370 (741)
T 2ecf_A 297 P---Q-HLSFQRQSRDQKKLDLVEVTLASNQ-QRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK- 370 (741)
T ss_dssp T---T-EEEEEEEETTSSEEEEEEEETTTCC-EEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-
T ss_pred C---C-EEEEEEecccCCeEEEEEEECCCCc-eEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-
Confidence 2 2 244332 36789999998743 3344444432 446788999998778888899888988764332
Q ss_pred eEEeeeeecCCCCeEEE-EECCCCcEEEEE-eCCC--cEEEEEcCC-CceEEEecccccceeEEEEeCCCCEEEEEeCC-
Q 016769 297 CVIKKEINLERPGISGT-SIRPDSKIAATA-GWDR--RVRIYNYRK-GSALAILKYHHATCNAVSFSSDCKLMASASED- 370 (383)
Q Consensus 297 ~~~~~~~~~~~~~i~~~-~~~p~~~~l~s~-~~dg--~i~iwd~~~-~~~~~~~~~h~~~v~~v~~spd~~~las~s~d- 370 (383)
. ..+..+...+..+ .|+|+++.|+.. +.++ +++||++.. ++....+.. ...+.+++|||||++|+....+
T Consensus 371 -~--~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~ 446 (741)
T 2ecf_A 371 -A--AALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNN 446 (741)
T ss_dssp -E--EESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEET
T ss_pred -e--eeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCC
Confidence 1 2233345567776 599999877544 4455 899999964 555566654 5668899999999988765444
Q ss_pred ---CcEEEEeC
Q 016769 371 ---STVALWEL 378 (383)
Q Consensus 371 ---~~i~~w~~ 378 (383)
..+.+|+.
T Consensus 447 ~~p~~~~l~~~ 457 (741)
T 2ecf_A 447 STPPQIELFRA 457 (741)
T ss_dssp TEEEEEEEEET
T ss_pred CCCCeEEEEEc
Confidence 35777775
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.75 E-value=4.2e-16 Score=155.87 Aligned_cols=296 Identities=11% Similarity=0.029 Sum_probs=168.6
Q ss_pred CceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCC---
Q 016769 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN--- 95 (383)
Q Consensus 19 ~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~--- 95 (383)
..|.+++|+|| ..|+.+ .|+.+++||+.+++.... ..+ ...+..+.++| +++.++. +.|++|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l-~~~--~~~~~~~~~Sp--dG~~la~-~~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYL-FDT--NEETASLDFSP--VGDRVAY-VRNHNLYIARGGKLGE 153 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEE-ECC--TTCCTTCEECT--TSSEEEE-EETTEEEEEECBCTTS
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEc-cCC--cccccCCcCCC--CCCEEEE-EECCeEEEEecCcccc
Confidence 57999999999 544443 469999999977654322 112 23456678888 4677777 4789999999987
Q ss_pred --CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCcee
Q 016769 96 --GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYM 173 (383)
Q Consensus 96 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (383)
++.... ........ ....... .. +. .......++++|+.++
T Consensus 154 ~~g~~~~~----~~~~~~~~-----~~g~~~~-~e----------e~-----------------~~~~~~~~SpDg~~la 196 (706)
T 2z3z_A 154 GMSRAIAV----TIDGTETL-----VYGQAVH-QR----------EF-----------------GIEKGTFWSPKGSCLA 196 (706)
T ss_dssp CCCCCEES----CSCCBTTE-----EESSCCG-GG----------CT-----------------TCCCSEEECTTSSEEE
T ss_pred cCCCcEEe----ccCCCCCe-----Ecccchh-hh----------hc-----------------CCCceEEECCCCCEEE
Confidence 542110 00000000 0000000 00 00 0000011223333221
Q ss_pred eec-------------------------------cCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEee
Q 016769 174 AVA-------------------------------GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAY 222 (383)
Q Consensus 174 ~~~-------------------------------g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 222 (383)
.++ ...+..|++||+.+++........ .. ..... ...+
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--------~~--~~~~~-~~~~ 265 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE--------PK--EKFLT-NLSW 265 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS--------CT--TCEEE-EEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC--------CC--ceeEe-eEEE
Confidence 111 123467999999887643211100 00 01111 1235
Q ss_pred cCCCCCCceEEEEEeCCC-----cEEEEeCCCCCCceeeeec-cc---cCeEEEEEeC--CCCceEEEEcCCcEEEEEcc
Q 016769 223 LPSKSQGFVNVLAGYEDG-----SILVWDIRNPGIPLTAMKV-HL---EPVLCLSIDE--SCNGGISGGADQKIVLYNLD 291 (383)
Q Consensus 223 ~~~~~~~~~~~~sg~~dg-----~i~~wdl~~~~~~~~~~~~-h~---~~v~~~~~~~--~~~~~~s~~~d~~i~~wdl~ 291 (383)
.|+. ..+++++.|+ .|++||+.++......... +. ..+..+.|++ ++..+++++.|+.+++|.++
T Consensus 266 spdg----~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 266 SPDE----NILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp CTTS----SEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred ECCC----CEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 5542 2466655565 8999999875232222211 11 1245678998 88888888889999999887
Q ss_pred CCCCeeEEeeeeecCCCCeEE-EEECCCCcEEEEEeCC-C----cEEEEEcCCCceEEEecccccceeEEEEeCCCCEEE
Q 016769 292 HSTGSCVIKKEINLERPGISG-TSIRPDSKIAATAGWD-R----RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMA 365 (383)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~i~~-~~~~p~~~~l~s~~~d-g----~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~la 365 (383)
...... ..+..+...+.. ++|+|+++.|+.++.+ + .|..||+.+++ ...+. |...+.+++|||||++|+
T Consensus 342 ~~~~~~---~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~ 416 (706)
T 2z3z_A 342 TTGRLI---RQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAII 416 (706)
T ss_dssp TTSCEE---EECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEE
T ss_pred CCCCEE---EecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEE
Confidence 332211 123334445666 7999999877666554 3 66677777665 34443 677799999999999887
Q ss_pred EEeCC----CcEEEEeCC
Q 016769 366 SASED----STVALWELY 379 (383)
Q Consensus 366 s~s~d----~~i~~w~~~ 379 (383)
.+..+ +.|++||+.
T Consensus 417 ~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 417 DIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp EEEECSSCSCEEEEEESS
T ss_pred EEecCCCCCcEEEEEECC
Confidence 76444 459999974
No 147
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.74 E-value=2.5e-16 Score=148.31 Aligned_cols=118 Identities=14% Similarity=0.032 Sum_probs=92.2
Q ss_pred eeccccCeEEEEEeCC-CCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEE
Q 016769 257 MKVHLEPVLCLSIDES-CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 335 (383)
Q Consensus 257 ~~~h~~~v~~~~~~~~-~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd 335 (383)
+++|..+|.++.|++. ...+++++.|++|++||++.. .... ....+...+.+++|+|++++|++|+.||+|++||
T Consensus 145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~--~~~~--~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd 220 (434)
T 2oit_A 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET--VKVC--ATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYL 220 (434)
T ss_dssp CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS--EEEE--EEECGGGCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC--ccee--eccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEc
Confidence 4568889999999997 667899999999999999754 2221 2223456799999999999999999999999999
Q ss_pred cCCCceEEEeccc-------ccceeEEEEeCCCCEEEE-EeCCCc------EEEEeCC
Q 016769 336 YRKGSALAILKYH-------HATCNAVSFSSDCKLMAS-ASEDST------VALWELY 379 (383)
Q Consensus 336 ~~~~~~~~~~~~h-------~~~v~~v~~spd~~~las-~s~d~~------i~~w~~~ 379 (383)
++ ++....+..| ...|.+++|++++.++++ ++.||. +++|++.
T Consensus 221 ~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 221 PT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp TT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred cC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEec
Confidence 98 5555555443 338999999999887654 445543 8899985
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.72 E-value=9.4e-15 Score=133.97 Aligned_cols=287 Identities=10% Similarity=0.094 Sum_probs=159.8
Q ss_pred cCCceeeEEEeCCCCeEEEecCC----CeEEEeeCccc-ccccccc-cccccceeeeeeecCCCCcceeE-ecccCCeEE
Q 016769 17 HRASVTDVCFHQTKPILFAGTTG----GELRIWDTVQH-RTVSSSW-VHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVK 89 (383)
Q Consensus 17 H~~~V~~v~f~~~~~~L~sgs~D----~~v~vW~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~-s~~~D~ti~ 89 (383)
|...+..++|+|||++|++++.+ +.|++|++... ..+..+. ..........+++ +++.++ +...++++.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~----dg~~l~~~~~~~~~v~ 123 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT----NGKNIVTANYSGGSIT 123 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE----CSSEEEEEETTTTEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE----CCCEEEEEECCCCEEE
Confidence 67788889999999999999986 79999997653 1111111 1111122334444 235555 445789999
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
+|++............. . .... .+.. .... ........+++++
T Consensus 124 ~~~~~~~g~~~~~~~~~----------~-~~g~--------~~~~----------------~~~~--~~~~~~~~~spdg 166 (361)
T 3scy_A 124 VFPIGQDGALLPASDVI----------E-FKGS--------GPDK----------------ERQT--MPHLHCVRITPDG 166 (361)
T ss_dssp EEEBCTTSCBCSCSEEE----------E-CCCC--------CSCT----------------TTCS--SCCEEEEEECTTS
T ss_pred EEEeCCCCcCcccceeE----------E-ccCC--------CCCc----------------cccC--CCcceEEEECCCC
Confidence 99997543211100000 0 0000 0000 0000 0000112344666
Q ss_pred CceeeeccCCcceEEEEecCCCCe------eeEe---ccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC
Q 016769 170 PKYMAVAGEQLSEVEIWDLNTAER------CTRL---HQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 240 (383)
Q Consensus 170 ~~~~~~~g~~~~~i~~Wdl~~~~~------~~~~---~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg 240 (383)
+ ++++++..++.+++|++..... +... .... . ..+.... ...|.|+. ...++++..++
T Consensus 167 ~-~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~------~-~~~~~~~--~~~~spdg---~~l~v~~~~~~ 233 (361)
T 3scy_A 167 K-YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK------V-APGSGPR--HLIFNSDG---KFAYLINEIGG 233 (361)
T ss_dssp S-EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE------C-CTTCCEE--EEEECTTS---SEEEEEETTTC
T ss_pred C-EEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee------c-CCCCCCe--EEEEcCCC---CEEEEEcCCCC
Confidence 4 4555555678999999875442 2111 0000 0 0001111 11355542 22234444799
Q ss_pred cEEEEeCCCCCC-ceeee---eccccCeEEEEEeCCCCceEEEEcC--CcEEEEEccCCCCeeEEeeeeecCCCCeEEEE
Q 016769 241 SILVWDIRNPGI-PLTAM---KVHLEPVLCLSIDESCNGGISGGAD--QKIVLYNLDHSTGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 241 ~i~~wdl~~~~~-~~~~~---~~h~~~v~~~~~~~~~~~~~s~~~d--~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~ 314 (383)
.|.+||+.+... .+..+ ..+......+.|+++++.+++++.+ +.|.+|+++..++.......... ...+..++
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~ 312 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFI 312 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEE
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEE
Confidence 999999975321 11112 2233446789999999988666654 88999999754444333333333 35678999
Q ss_pred ECCCCcEEEEEe-CCCcEEEEEcC--CCceEEEe-cccccceeEEEEe
Q 016769 315 IRPDSKIAATAG-WDRRVRIYNYR--KGSALAIL-KYHHATCNAVSFS 358 (383)
Q Consensus 315 ~~p~~~~l~s~~-~dg~i~iwd~~--~~~~~~~~-~~h~~~v~~v~~s 358 (383)
|+||+++|++++ .+++|.+|+++ +++..... ..+...+.||+|.
T Consensus 313 ~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 313 ITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp ECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred ECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 999999888887 67999997654 56654332 2345578888886
No 149
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=4.7e-16 Score=143.89 Aligned_cols=315 Identities=14% Similarity=0.083 Sum_probs=169.5
Q ss_pred CCCeeeeeecCCceee-----EEEeCCCCeEEEecC-CC--eEEEeeCcccccccccccccccceeeeeeecCCCCccee
Q 016769 8 PDPVAVLRGHRASVTD-----VCFHQTKPILFAGTT-GG--ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV 79 (383)
Q Consensus 8 ~~~~~~l~gH~~~V~~-----v~f~~~~~~L~sgs~-D~--~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (383)
-.++..|..|...+.. .+|+|||++|+.++. ++ .|.+||+.+++.......+. ..+....++| ++..|
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~--~~~~~~~~sp--dg~~l 95 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRG--DNTFGGFLSP--DDDAL 95 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSC--BCSSSCEECT--TSSEE
T ss_pred CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCC--CCccceEEcC--CCCEE
Confidence 3456677788877666 899999999988887 67 47788887765443322221 2233567887 46888
Q ss_pred EecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCcc
Q 016769 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSF 159 (383)
Q Consensus 80 ~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (383)
+.++.++.+.+||+++++... .................+. .......... ..
T Consensus 96 ~~~~~~~~l~~~d~~~g~~~~----~~~~~~~~~~~~~~~~~~d--------g~~l~~~~~~----------~~------ 147 (388)
T 3pe7_A 96 FYVKDGRNLMRVDLATLEENV----VYQVPAEWVGYGTWVANSD--------CTKLVGIEIR----------RE------ 147 (388)
T ss_dssp EEEETTTEEEEEETTTCCEEE----EEECCTTEEEEEEEEECTT--------SSEEEEEEEE----------GG------
T ss_pred EEEeCCCeEEEEECCCCccee----eeechhhcccccceeECCC--------CCeecccccc----------Cc------
Confidence 888888999999998874211 0000000000000000000 0000000000 00
Q ss_pred ceecccCCCCC--cee-eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecC-CCCCCceEEEE
Q 016769 160 EIIDDVPAEGP--KYM-AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP-SKSQGFVNVLA 235 (383)
Q Consensus 160 ~~~~~~~~~~~--~~~-~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s 235 (383)
...+... .+. ......+..|.+||+.+++......... .. ....+.| +. ..++.
T Consensus 148 ----~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-----------~~---~~~~~sp~dg----~~l~~ 205 (388)
T 3pe7_A 148 ----DWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ-----------WL---GHPIYRPYDD----STVAF 205 (388)
T ss_dssp ----GCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-----------CE---EEEEEETTEE----EEEEE
T ss_pred ----ccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-----------cc---cccEECCCCC----CEEEE
Confidence 0000000 000 1112334679999999886432222110 00 1112444 31 23444
Q ss_pred EeC------CCcEEEEeCCCCCCceeeeeccc--cCeEEEEEeCCCCceEEEEc--CC---cEEEEEccCCCCeeEEeee
Q 016769 236 GYE------DGSILVWDIRNPGIPLTAMKVHL--EPVLCLSIDESCNGGISGGA--DQ---KIVLYNLDHSTGSCVIKKE 302 (383)
Q Consensus 236 g~~------dg~i~~wdl~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~s~~~--d~---~i~~wdl~~~~~~~~~~~~ 302 (383)
... +..|.++|+.... ...+..+. ..+....|++++..++..+. ++ .|.+||++......+. .
T Consensus 206 ~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~--~ 281 (388)
T 3pe7_A 206 CHEGPHDLVDARMWLINEDGTN--MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLT--S 281 (388)
T ss_dssp EECSCTTTSSCSEEEEETTSCC--CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEE--E
T ss_pred EEecCCCCCcceEEEEeCCCCc--eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEE--c
Confidence 333 3377888876432 23333333 35777889999987755433 22 3899998755422211 1
Q ss_pred eecCC---CCeEEEEECCCCcEEEEE---------eCCCcEEEEEcCCCceEEEeccccc-----------ceeEEEEeC
Q 016769 303 INLER---PGISGTSIRPDSKIAATA---------GWDRRVRIYNYRKGSALAILKYHHA-----------TCNAVSFSS 359 (383)
Q Consensus 303 ~~~~~---~~i~~~~~~p~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~h~~-----------~v~~v~~sp 359 (383)
..... ......+|+|||+.|+.. ..+..|++||+.+++. ..+..|.. .+.+++|+|
T Consensus 282 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~sp 360 (388)
T 3pe7_A 282 MPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTP 360 (388)
T ss_dssp ECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECT
T ss_pred CCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCC
Confidence 11100 001223689999887754 4567999999988764 44555555 578889999
Q ss_pred CCCEEEEEe-CCCcEEEEeCCCC
Q 016769 360 DCKLMASAS-EDSTVALWELYPP 381 (383)
Q Consensus 360 d~~~las~s-~d~~i~~w~~~~~ 381 (383)
||+.|+.++ .++...||.+..+
T Consensus 361 Dg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 361 DDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp TSSEEEEEECTTSSCEEEEEECC
T ss_pred CCCEEEEEecCCCceeEEEEECC
Confidence 999777655 5888888876543
No 150
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.71 E-value=1.5e-14 Score=130.62 Aligned_cols=193 Identities=9% Similarity=0.045 Sum_probs=125.5
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCe-eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCC-C--c
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED-G--S 241 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~d-g--~ 241 (383)
+++++ ++++++..++.|.+||+++++. ...+...... . .++ .+.|+. . .++++..+ + .
T Consensus 48 s~dg~-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---------~-~~~---~~s~dg---~-~l~~~~~~~~~~~ 109 (331)
T 3u4y_A 48 TSDCS-NVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS---------M-ADV---DITPDD---Q-FAVTVTGLNHPFN 109 (331)
T ss_dssp CSSSC-EEEEEESTTCEEEEEECSSSSCEEEEEEECSSC---------C-CCE---EECTTS---S-EEEECCCSSSSCE
T ss_pred cCCCC-EEEEEeCCCCeEEEEECCCCceeEEecccCCCC---------c-cce---EECCCC---C-EEEEecCCCCccc
Confidence 34554 4555555577999999998886 4444322111 0 001 133332 2 34444444 3 8
Q ss_pred EEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEE-EcCCc-EEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC
Q 016769 242 ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISG-GADQK-IVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 319 (383)
Q Consensus 242 i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~-~~d~~-i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 319 (383)
|.+||+++. ..+..+..+ .....+.|+++++.++++ ..++. +.+|+++.....................++|+|++
T Consensus 110 i~v~d~~~~-~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg 187 (331)
T 3u4y_A 110 MQSYSFLKN-KFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDG 187 (331)
T ss_dssp EEEEETTTT-EEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTS
T ss_pred EEEEECCCC-CeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCC
Confidence 999999874 334445443 345899999999866555 45588 99999985432211111111233568899999999
Q ss_pred cEEEEE-eCCCcEEEEEcCCCce---EEEecccccceeEEEEeCCCCEEEEE-eCCCcEEEEeCC
Q 016769 320 KIAATA-GWDRRVRIYNYRKGSA---LAILKYHHATCNAVSFSSDCKLMASA-SEDSTVALWELY 379 (383)
Q Consensus 320 ~~l~s~-~~dg~i~iwd~~~~~~---~~~~~~h~~~v~~v~~spd~~~las~-s~d~~i~~w~~~ 379 (383)
++++.+ ..+++|++||+.+++. +..+.. ...+..++|+|||++|+.+ ..++.|.+||+.
T Consensus 188 ~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 188 NFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp SEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETT
T ss_pred CEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECC
Confidence 965544 4689999999999887 766653 3567889999999966544 468889999985
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.70 E-value=3.8e-15 Score=135.34 Aligned_cols=281 Identities=9% Similarity=0.054 Sum_probs=156.4
Q ss_pred eEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcce-eEecccCCeEEEeecCCCCCCCC
Q 016769 23 DVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNK-VISQGRDGTVKCWDIENGGLSSN 101 (383)
Q Consensus 23 ~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~D~ti~~Wd~~~~~~~~~ 101 (383)
.+++++++.++++++.|++|++||..+++.+..+..+. ......++++++ ++. +++...+++|.+||+++++...
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~d--g~~~~v~~~~~~~i~~~d~~t~~~~~- 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD-KFGPGTAMMAPD--NRTAYVLNNHYGDIYGIDLDTCKNTF- 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSS-CCSSCEEEECTT--SSEEEEEETTTTEEEEEETTTTEEEE-
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCC-CCCCceeEECCC--CCEEEEEeCCCCcEEEEeCCCCcEEE-
Confidence 46788999999999999999999998876654443221 013456677773 454 4567789999999998763210
Q ss_pred CeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCC--
Q 016769 102 PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQ-- 179 (383)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-- 179 (383)
.+... ..+... + .......++++++ +++++...
T Consensus 80 ---~~~~~----------~~~~~~---------------~----------------~~~~~~~~spdg~-~l~~~~~~~~ 114 (349)
T 1jmx_B 80 ---HANLS----------SVPGEV---------------G----------------RSMYSFAISPDGK-EVYATVNPTQ 114 (349)
T ss_dssp ---EEESC----------CSTTEE---------------E----------------ECSSCEEECTTSS-EEEEEEEEEE
T ss_pred ---EEEcc----------cccccc---------------c----------------ccccceEECCCCC-EEEEEccccc
Confidence 00000 000000 0 0000012334444 34444322
Q ss_pred ---------cceEEEEecCCCCeee---EeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 180 ---------LSEVEIWDLNTAERCT---RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 180 ---------~~~i~~Wdl~~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
.+.|.+||+++++... ..... ....++ .+.++ +. ++++ ++.|.+||+
T Consensus 115 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----------~~~~~~---~~s~d---g~--l~~~--~~~i~~~d~ 173 (349)
T 1jmx_B 115 RLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-----------RQVYLM---RAADD---GS--LYVA--GPDIYKMDV 173 (349)
T ss_dssp ECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-----------SSCCCE---EECTT---SC--EEEE--SSSEEEECT
T ss_pred ccccccccCCCeEEEEECCCccccceeeeccCC-----------Ccccce---eECCC---Cc--EEEc--cCcEEEEeC
Confidence 3789999998854322 22111 011111 13333 22 3344 344999999
Q ss_pred CCCCCceeeeeccc--c----------------------CeEEEEEeCCCCceE-EEEcCCcEEEEEccCCCCeeEEeee
Q 016769 248 RNPGIPLTAMKVHL--E----------------------PVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTGSCVIKKE 302 (383)
Q Consensus 248 ~~~~~~~~~~~~h~--~----------------------~v~~~~~~~~~~~~~-s~~~d~~i~~wdl~~~~~~~~~~~~ 302 (383)
++.. ....+..+. . ....+.+.+++.... .......+..+|+.... ... ..
T Consensus 174 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~ 249 (349)
T 1jmx_B 174 KTGK-YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK--THT-QE 249 (349)
T ss_dssp TTCC-EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC--EEE-EE
T ss_pred CCCc-eeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc--EEe-cc
Confidence 8743 233333221 0 112233332211000 00000111223333221 111 11
Q ss_pred eecCCCCeEEEEECC-CCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 303 INLERPGISGTSIRP-DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 303 ~~~~~~~i~~~~~~p-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.......+.+++|+| ++++++++ +++|++||+.+++.+..+.. ...+.+++|+|||++|++++.++.|++||+..
T Consensus 250 ~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 250 FADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp EEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred cccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 112334678899999 99998887 89999999999988777653 34578899999999888889999999999853
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.70 E-value=1e-14 Score=131.70 Aligned_cols=258 Identities=10% Similarity=0.065 Sum_probs=156.3
Q ss_pred ceeeEEEeCCCCeE-EEecCCCeEEEeeCccccccccccccc---ccceeeeeeecCCCCcceeEecc------------
Q 016769 20 SVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHS---AAHGIVSVATGPSIGLNKVISQG------------ 83 (383)
Q Consensus 20 ~V~~v~f~~~~~~L-~sgs~D~~v~vW~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~s~~------------ 83 (383)
.+..++|+|++++| ++++.++.|.+||+.+++.+..+.... .......+.+++ +++.++.++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~~~~~~~~~~~~ 112 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSP--DGKTLAIYESPVRLELTHFEV 112 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECT--TSSEEEEEEEEEEECSSCEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECC--CCCEEEEEecccccccccccc
Confidence 58899999999765 566778999999998776554332211 011345677777 456676664
Q ss_pred cCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceec
Q 016769 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIID 163 (383)
Q Consensus 84 ~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (383)
.++.|.+||+++++... .+ . . .. . ....
T Consensus 113 ~~~~i~v~d~~~~~~~~----~~----------~--~-~~-------~----------------------------~~~~ 140 (337)
T 1pby_B 113 QPTRVALYDAETLSRRK----AF----------E--A-PR-------Q----------------------------ITML 140 (337)
T ss_dssp CCCEEEEEETTTTEEEE----EE----------E--C-CS-------S----------------------------CCCE
T ss_pred cCceEEEEECCCCcEEE----EE----------e--C-CC-------C----------------------------ccee
Confidence 57999999997653100 00 0 0 00 0 0001
Q ss_pred ccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCce---EEEEEeCCC
Q 016769 164 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV---NVLAGYEDG 240 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~sg~~dg 240 (383)
.++++++. ++++ ++.|++||+++++....+..........+++.+..+.. ... .+.. .......++
T Consensus 141 ~~s~dg~~-l~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~------~~~-~~~~~~~~~~~~~~~~ 209 (337)
T 1pby_B 141 AWARDGSK-LYGL---GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWN------QHE-SSGVMATPFYTARKDI 209 (337)
T ss_dssp EECTTSSC-EEEE---SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCC------CCT-TTTEEEEEEEEEBTTS
T ss_pred EECCCCCE-EEEe---CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEee------ecc-CCCceeeeeecccccc
Confidence 13345543 4443 36799999999887666553321122222332221110 000 0000 011122222
Q ss_pred ----------cEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 241 ----------SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 241 ----------~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
.|.+||+++.......+..+...+..+.+++++..++++ ++.|.+||++... .. ..... ...+
T Consensus 210 ~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~--~~--~~~~~-~~~~ 282 (337)
T 1pby_B 210 DPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA--SI--KRVPL-PHSY 282 (337)
T ss_dssp CTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE--EE--EEEEC-SSCC
T ss_pred ccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCc--Cc--ceecC-CCce
Confidence 689999987543222334455567889999999887777 7899999987532 22 12222 2457
Q ss_pred EEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccc
Q 016769 311 SGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~ 349 (383)
.+++|+|+++++++++.++.|++||+.+++.+..+..+.
T Consensus 283 ~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 283 YSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp CEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred eeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 889999999999999999999999999999887776543
No 153
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.70 E-value=1.3e-14 Score=133.37 Aligned_cols=119 Identities=12% Similarity=0.033 Sum_probs=83.6
Q ss_pred ccCeEEEEEeCCCCceEEEEc-CCcEEEEEccCCCCeeEE--e--eeeecC--C-C-------CeEEEE-ECCCCcEEEE
Q 016769 261 LEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVI--K--KEINLE--R-P-------GISGTS-IRPDSKIAAT 324 (383)
Q Consensus 261 ~~~v~~~~~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~--~--~~~~~~--~-~-------~i~~~~-~~p~~~~l~s 324 (383)
...+..+.|+++++.+++++. ++.|.+|+++..++.... . ..+... . . .+..++ |+|||++|++
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v 271 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA 271 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE
Confidence 345778899999988877764 789999998754444321 1 111111 0 1 478899 9999998877
Q ss_pred EeCCC------cEEEEEcC-CCceEE---EecccccceeEEEEeC---CCCEEEEEeCC-CcEEEEeCC
Q 016769 325 AGWDR------RVRIYNYR-KGSALA---ILKYHHATCNAVSFSS---DCKLMASASED-STVALWELY 379 (383)
Q Consensus 325 ~~~dg------~i~iwd~~-~~~~~~---~~~~h~~~v~~v~~sp---d~~~las~s~d-~~i~~w~~~ 379 (383)
+..+. +|++|+++ +++... ....+...+..++|+| ||++|++++.+ +.|++|++.
T Consensus 272 ~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 272 SSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp EEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred ECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 66432 89999996 565433 2333455567889999 89999998875 899999874
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.69 E-value=1.6e-16 Score=149.62 Aligned_cols=147 Identities=13% Similarity=0.107 Sum_probs=112.4
Q ss_pred EEEEEeCCCcEEEEeCCCC-------C--Cceee-----eeccccCeEEEEEeCCCCceE----EEEcCCcEEEEEccCC
Q 016769 232 NVLAGYEDGSILVWDIRNP-------G--IPLTA-----MKVHLEPVLCLSIDESCNGGI----SGGADQKIVLYNLDHS 293 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~-------~--~~~~~-----~~~h~~~v~~~~~~~~~~~~~----s~~~d~~i~~wdl~~~ 293 (383)
.+++++.|+ +++|+...- . ..+.. ...+..+|.+++|++++..++ +++.|+.|++||++..
T Consensus 50 ~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~ 128 (434)
T 2oit_A 50 LVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTF 128 (434)
T ss_dssp EEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHH
T ss_pred EEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEcccc
Confidence 466777777 999875310 0 00110 112445799999999999888 7888999999998643
Q ss_pred -----CC-ee-EEeeeeecCCCCeEEEEECCC-CcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEE
Q 016769 294 -----TG-SC-VIKKEINLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMA 365 (383)
Q Consensus 294 -----~~-~~-~~~~~~~~~~~~i~~~~~~p~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~la 365 (383)
.. .. ........|...|.+++|+|+ +++|++++.||+|++||++++.......+|...|.+++|+|+|++|+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~la 208 (434)
T 2oit_A 129 SNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLA 208 (434)
T ss_dssp HCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEE
T ss_pred ccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEE
Confidence 11 11 111223345678999999998 78999999999999999999877766677999999999999999999
Q ss_pred EEeCCCcEEEEeCC
Q 016769 366 SASEDSTVALWELY 379 (383)
Q Consensus 366 s~s~d~~i~~w~~~ 379 (383)
+|+.|+.|++||+.
T Consensus 209 sgs~dg~v~iwd~~ 222 (434)
T 2oit_A 209 VGKQNGTVVQYLPT 222 (434)
T ss_dssp EEETTSCEEEECTT
T ss_pred EEcCCCcEEEEccC
Confidence 99999999999985
No 155
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.69 E-value=3.3e-15 Score=149.69 Aligned_cols=330 Identities=9% Similarity=-0.024 Sum_probs=163.9
Q ss_pred CeeeeeecCC---ceeeEEEeCCCCeEEEecCC---------CeEEEeeCccccccccccccc-ccceeeeeeecCCCCc
Q 016769 10 PVAVLRGHRA---SVTDVCFHQTKPILFAGTTG---------GELRIWDTVQHRTVSSSWVHS-AAHGIVSVATGPSIGL 76 (383)
Q Consensus 10 ~~~~l~gH~~---~V~~v~f~~~~~~L~sgs~D---------~~v~vW~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 76 (383)
....+.+|.. .|.+++|||||++|++++.| +.+.+||+.+++. ..+.... ....+..++++| ++
T Consensus 49 ~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SP--dG 125 (723)
T 1xfd_A 49 STVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGP--KG 125 (723)
T ss_dssp CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCS--ST
T ss_pred EEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECC--CC
Confidence 4456666765 49999999999999999875 7788999987764 1121111 112356788888 46
Q ss_pred ceeEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeec---------cccccccccCCCCccceeccCccc-cc
Q 016769 77 NKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK---------EPYANAKQANEPKDCYEREVGETV-DT 146 (383)
Q Consensus 77 ~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~~ 146 (383)
++++.++. ++|++||+++++... ................ ..........+....+........ ..
T Consensus 126 ~~la~~~~-~~i~~~~~~~g~~~~----~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~ 200 (723)
T 1xfd_A 126 QQLIFIFE-NNIYYCAHVGKQAIR----VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIM 200 (723)
T ss_dssp TCEEEEET-TEEEEESSSSSCCEE----EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEE
T ss_pred CEEEEEEC-CeEEEEECCCCceEE----EecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceE
Confidence 78877765 799999998764311 0000000000000000 000000001111000000000000 00
Q ss_pred CccccccccCCccceecccCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCC
Q 016769 147 DSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK 226 (383)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 226 (383)
.... .............++.+|.. ..+..|++||+.+++....+..+. .... ..... ....++|+.
T Consensus 201 ~~~~-~~~~~~~~~~~~~~~~~G~~------~~~~~l~~~d~~~~~~~~~l~~~~-----~~~~-~~~~~-~~~~~SpDg 266 (723)
T 1xfd_A 201 ELPT-YTGSIYPTVKPYHYPKAGSE------NPSISLHVIGLNGPTHDLEMMPPD-----DPRM-REYYI-TMVKWATST 266 (723)
T ss_dssp EECC-CSSSSSCCCEEEECCBTTSC------CCEEEEEEEESSSSCCCEECCCCC-----CGGG-SSEEE-EEEEESSSS
T ss_pred Eeec-cCCcCCCcceeccCCCCCCC------CCeeEEEEEECCCCceeEEeeCCc-----cCCC-cccee-EEEEEeCCC
Confidence 0000 00000000000001111110 123479999998887544443210 0000 01111 112355542
Q ss_pred CCCceEEEEEe----CCCcEEEEeCCCCCCceeeeec-cccCe----EEEEEeCCCCceEE--EEcCC----c--EEEEE
Q 016769 227 SQGFVNVLAGY----EDGSILVWDIRNPGIPLTAMKV-HLEPV----LCLSIDESCNGGIS--GGADQ----K--IVLYN 289 (383)
Q Consensus 227 ~~~~~~~~sg~----~dg~i~~wdl~~~~~~~~~~~~-h~~~v----~~~~~~~~~~~~~s--~~~d~----~--i~~wd 289 (383)
..+++.. .+..|.+||+.++. ....+.. +...+ ..+.|+++++.++. +..++ . |.+||
T Consensus 267 ----~~l~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 267 ----KVAVTWLNRAQNVSILTLCDATTGV-CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp ----EEEEEEEETTSCEEEEEEEETTTCC-EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred ----eEEEEEEcCCCCeEEEEEEeCCCCc-ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 2344433 34679999998754 2333332 22333 26789999987764 45666 3 55565
Q ss_pred -ccCCCCeeEEeeeeecCCCCeEE-EEECCCCcEEEEEeCC---CcEEEEEcCCCc--eEEEecc---cccceeEEEEeC
Q 016769 290 -LDHSTGSCVIKKEINLERPGISG-TSIRPDSKIAATAGWD---RRVRIYNYRKGS--ALAILKY---HHATCNAVSFSS 359 (383)
Q Consensus 290 -l~~~~~~~~~~~~~~~~~~~i~~-~~~~p~~~~l~s~~~d---g~i~iwd~~~~~--~~~~~~~---h~~~v~~v~~sp 359 (383)
.......+. ..+......+.. ++|+||+++|+..+.+ +++++|+++... ....+.. |...+..++|+|
T Consensus 342 ~~~~~~~~~~--~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~sp 419 (723)
T 1xfd_A 342 SQPNSSNDNI--QSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSH 419 (723)
T ss_dssp SSCCSSSCCC--CBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECT
T ss_pred ccCCCCccce--eEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECC
Confidence 222210000 111112233444 6899999998776665 789999986432 2333433 667788999999
Q ss_pred CCCEEEEEe
Q 016769 360 DCKLMASAS 368 (383)
Q Consensus 360 d~~~las~s 368 (383)
||++|+...
T Consensus 420 dg~~l~~~~ 428 (723)
T 1xfd_A 420 SMDFFLLKC 428 (723)
T ss_dssp TSSEEEEEC
T ss_pred CCCEEEEEc
Confidence 999877643
No 156
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.69 E-value=1.3e-14 Score=128.17 Aligned_cols=192 Identities=14% Similarity=0.075 Sum_probs=126.6
Q ss_pred CCCCCceeeeccCCcceEEEEecCC-CCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEe--CCCcE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY--EDGSI 242 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~--~dg~i 242 (383)
+++++ ++++++ ++.|++||+++ ++......... .....++ .+.|+. ..++.++ .++.+
T Consensus 50 spdg~-~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~---------~~~~~~~---~~spdg----~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 50 SPDGK-YLLLNS--EGLLYRLSLAGDPSPEKVDTGFA---------TICNNDH---GISPDG----ALYAISDKVEFGKS 110 (297)
T ss_dssp CTTSS-EEEEEE--TTEEEEEESSSCCSCEECCCTTC---------CCBCSCC---EECTTS----SEEEEEECTTTSSC
T ss_pred CCCCC-EEEEEc--CCeEEEEeCCCCCCceEeccccc---------cccccce---EECCCC----CEEEEEEeCCCCcc
Confidence 35554 444433 57999999988 66433222110 0011111 244432 2466666 34556
Q ss_pred EEEeCCCCCCceeeeeccccCeEEEEEeCCCCceE-EEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcE
Q 016769 243 LVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 321 (383)
Q Consensus 243 ~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 321 (383)
+||.+.........+..+ ..+..+.|++++..++ +++.|+.+++|+++..+.... .+..+...+.+++|+|++++
T Consensus 111 ~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~s~dg~~ 186 (297)
T 2ojh_A 111 AIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET---RLTHGEGRNDGPDYSPDGRW 186 (297)
T ss_dssp EEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE---ECCCSSSCEEEEEECTTSSE
T ss_pred eEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcce---EcccCCCccccceECCCCCE
Confidence 666553222223334333 3588889999998776 778899999999865443321 22334467899999999998
Q ss_pred EEEEe-CCCcEEEEEcC-CCceEEEecccccceeEEEEeCCCCEEEEEeCC-----------CcEEEEeCCC
Q 016769 322 AATAG-WDRRVRIYNYR-KGSALAILKYHHATCNAVSFSSDCKLMASASED-----------STVALWELYP 380 (383)
Q Consensus 322 l~s~~-~dg~i~iwd~~-~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d-----------~~i~~w~~~~ 380 (383)
++.++ .|+.+++|+++ .+.....+..|...+.+++|+|||++|++++.+ +.|.+||+..
T Consensus 187 l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 187 IYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp EEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred EEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 87766 59999999986 566677788888889999999999999988876 5699999853
No 157
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.66 E-value=1.2e-13 Score=125.76 Aligned_cols=203 Identities=15% Similarity=0.020 Sum_probs=131.2
Q ss_pred CCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEE-eCCCcEEEE
Q 016769 167 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG-YEDGSILVW 245 (383)
Q Consensus 167 ~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg-~~dg~i~~w 245 (383)
++++ ++.+++..++.|.+||+++++.+..+........ ..........+ .+.|+. ...++++ +.++.|.+|
T Consensus 98 ~dg~-~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~s~dg---~~l~~~~~~~~~~i~~~ 169 (353)
T 3vgz_A 98 NTTQ-TLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRT-EEVRPLQPREL---VADDAT---NTVYISGIGKESVIWVV 169 (353)
T ss_dssp TTTT-EEEEEETTTTEEEEEETTTCCEEEEEESCCCCCC-SSCCCCEEEEE---EEETTT---TEEEEEEESSSCEEEEE
T ss_pred CCCC-EEEEEecCCCEEEEEeCCCCeeEEEEecCCCccc-cccCCCCCceE---EECCCC---CEEEEEecCCCceEEEE
Confidence 4444 3455556678999999999887666643211000 00000001111 233432 2223333 458899999
Q ss_pred eCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE
Q 016769 246 DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 325 (383)
Q Consensus 246 dl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~ 325 (383)
|+++. .....+..+...+..+.+++++..+++++.++.|.+||+........+..........+.+++|+|++++++.+
T Consensus 170 d~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 170 DGGNI-KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT 248 (353)
T ss_dssp ETTTT-EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred cCCCC-ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence 99874 33445554555578899999999899999999999999875432111111011133457889999999977666
Q ss_pred eC-CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEE-EEEeCCCcEEEEeCCC
Q 016769 326 GW-DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASASEDSTVALWELYP 380 (383)
Q Consensus 326 ~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~l-as~s~d~~i~~w~~~~ 380 (383)
+. ++.|.+||+.+++.+..+.... ...++|+|||+++ ++...++.|.+||+..
T Consensus 249 ~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 249 DSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp ESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred eCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 65 4999999999999887776433 2568999999954 5555799999999853
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.66 E-value=2.4e-15 Score=147.13 Aligned_cols=136 Identities=17% Similarity=0.150 Sum_probs=104.3
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcC----CcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD----QKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d----~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
+++.+.++.+.+||+.++. . ..+..+.. ..+.|+|+++.+++++.| ..|.+||++..... .+..+..
T Consensus 125 ~~~s~~~~~~~l~d~~~g~-~-~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-----~l~~~~~ 195 (582)
T 3o4h_A 125 VFTGATEDRVALYALDGGG-L-RELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-----VFDSGEG 195 (582)
T ss_dssp EEEEECSSCEEEEEEETTE-E-EEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-----EECCSSC
T ss_pred EEEecCCCCceEEEccCCc-E-EEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-----EeecCCC
Confidence 3344444555699997643 2 22332222 788899999998877776 77999998755432 2233445
Q ss_pred CeEEEEECCCCcEEEEEeCCC--cEEEEEcCCCceEEEecccccceeEEE--------EeCCCCEEEEEeCCCcEEEEeC
Q 016769 309 GISGTSIRPDSKIAATAGWDR--RVRIYNYRKGSALAILKYHHATCNAVS--------FSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~v~--------~spd~~~las~s~d~~i~~w~~ 378 (383)
.+..++|+|||++|+++..++ +|++||+.+++.. .+.+|...+..++ |+|||+++++++.|+.+++|++
T Consensus 196 ~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 196 SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 689999999999999888899 8999999998877 7778888787777 9999999999999999999987
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.65 E-value=4.6e-15 Score=148.69 Aligned_cols=292 Identities=6% Similarity=-0.071 Sum_probs=163.3
Q ss_pred eEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccc-cceeeeeeecCCCCcceeEeccc---------CCeEEEee
Q 016769 23 DVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVSVATGPSIGLNKVISQGR---------DGTVKCWD 92 (383)
Q Consensus 23 ~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~---------D~ti~~Wd 92 (383)
+++|+|||++++++ .|++|++||+.++++...+..+.. ...+..++++| ++++|+.++. |++|++||
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~Sp--Dg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSP--DRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECT--TSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECC--CCCeEEEEecCceeEEeecceEEEEEE
Confidence 67999999766655 699999999988765443322211 01367888998 4678887765 79999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
+++++.... ..+ .. ......++++|+.+
T Consensus 97 ~~~g~~~~~--~~l-------------~~-------------------------------------~~~~~~~SPDG~~l 124 (719)
T 1z68_A 97 LSNGEFVRG--NEL-------------PR-------------------------------------PIQYLCWSPVGSKL 124 (719)
T ss_dssp TTTTEECCS--SCC-------------CS-------------------------------------SBCCEEECSSTTCE
T ss_pred CCCCccccc--eec-------------Cc-------------------------------------ccccceECCCCCEE
Confidence 987642100 000 00 00012345777644
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCc------eeeEEEeecCCCCCCceEEEEEeCCC------
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRG------MCMAVQAYLPSKSQGFVNVLAGYEDG------ 240 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~sg~~dg------ 240 (383)
+.+ .++.|++||+.+++.......... ........... -......|+|+. ..++.++.|.
T Consensus 125 -a~~--~~~~i~~~~~~~g~~~~l~~~~~~-~~v~~g~~~~v~~ee~~~~~~~~~wSPDG----~~la~~~~d~~~~~~~ 196 (719)
T 1z68_A 125 -AYV--YQNNIYLKQRPGDPPFQITFNGRE-NKIFNGIPDWVYEEEMLATKYALWWSPNG----KFLAYAEFNDTDIPVI 196 (719)
T ss_dssp -EEE--ETTEEEEESSTTSCCEECCCCCBT-TTEEESSCCHHHHHHTTCSSCCEEECTTS----SEEEEEEEECTTSCEE
T ss_pred -EEE--ECCeEEEEeCCCCCcEEEecCCCc-CCeEcccccceeeeecccCcccEEECCCC----CEEEEEEECCCCCceE
Confidence 333 256999999988775322211100 00000000000 000001244432 1344444331
Q ss_pred ----------------------------cEEEEeCCCCCCc--e-----eeeeccccCeEEEEEeCCCCceEEEEc--CC
Q 016769 241 ----------------------------SILVWDIRNPGIP--L-----TAMKVHLEPVLCLSIDESCNGGISGGA--DQ 283 (383)
Q Consensus 241 ----------------------------~i~~wdl~~~~~~--~-----~~~~~h~~~v~~~~~~~~~~~~~s~~~--d~ 283 (383)
+|++||+.++... + ..+..|...+..+.|+|++..+++... ++
T Consensus 197 ~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~ 276 (719)
T 1z68_A 197 AYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQN 276 (719)
T ss_dssp EEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTT
T ss_pred EeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccC
Confidence 7889998764320 1 112357778899999999665555332 22
Q ss_pred --cEEEEE----ccCCCCeeEEeeeeecCCCCeE-----EEEECCCCcEEE--EEeCCC--cEEEEEcCCCceEEEeccc
Q 016769 284 --KIVLYN----LDHSTGSCVIKKEINLERPGIS-----GTSIRPDSKIAA--TAGWDR--RVRIYNYRKGSALAILKYH 348 (383)
Q Consensus 284 --~i~~wd----l~~~~~~~~~~~~~~~~~~~i~-----~~~~~p~~~~l~--s~~~dg--~i~iwd~~~~~~~~~~~~h 348 (383)
.|.+|| ++..............+...+. .+.|+|||+.++ +...++ .|.+||+..++ ...+..+
T Consensus 277 ~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~ 355 (719)
T 1z68_A 277 VSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSG 355 (719)
T ss_dssp EEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCS
T ss_pred eEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccC
Confidence 377788 4432211111000012333344 788999999544 344555 46666776665 4456566
Q ss_pred ccceeEEEEeCCCCEEEEEeCC-----CcEEEEeCC
Q 016769 349 HATCNAVSFSSDCKLMASASED-----STVALWELY 379 (383)
Q Consensus 349 ~~~v~~v~~spd~~~las~s~d-----~~i~~w~~~ 379 (383)
...+..+.++ |++.|+..+.+ +.+++|.+.
T Consensus 356 ~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 356 KWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp SSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred ceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 6678888888 88877666654 889999874
No 160
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.61 E-value=1.4e-13 Score=126.29 Aligned_cols=270 Identities=11% Similarity=0.125 Sum_probs=158.3
Q ss_pred cCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecc----------cCCeEEEeecCCCCCCCCCeeee
Q 016769 37 TTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVKCWDIENGGLSSNPSLTI 106 (383)
Q Consensus 37 s~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------~D~ti~~Wd~~~~~~~~~~~~~~ 106 (383)
..|+.|.+||..+++.+..+..+. .- .+++++ ++++++.+. .+++|.+||..+.+.. ..+
T Consensus 28 ~~d~~v~v~D~~t~~~~~~i~~g~---~p-~i~~sp--dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~----~~i 97 (361)
T 2oiz_A 28 LTESRVHVYDYTNGKFLGMVPTAF---NG-HVQVSN--DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFE----KEI 97 (361)
T ss_dssp GGGCEEEEEETTTCCEEEEEECCE---EE-EEEECT--TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEE----EEE
T ss_pred cccCeEEEEECCCCeEEEEecCCC---CC-ceEECC--CCCEEEEEEecccccccCCCCCEEEEEECcCCcEE----EEE
Confidence 357899999988777655443221 22 678888 466666553 4788999998765321 111
Q ss_pred ecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCC-cceEEE
Q 016769 107 KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQ-LSEVEI 185 (383)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~i~~ 185 (383)
.+...... .+ .......++++|+ ++.++... ++.|.+
T Consensus 98 ----------~~~~~~~~---------------~g----------------~~p~~i~~spdg~-~l~v~n~~~~~~v~v 135 (361)
T 2oiz_A 98 ----------SLPPKRVQ---------------GL----------------NYDGLFRQTTDGK-FIVLQNASPATSIGI 135 (361)
T ss_dssp ----------EECTTBCC---------------BC----------------CCGGGEEECTTSS-EEEEEEESSSEEEEE
T ss_pred ----------EcCccccc---------------cC----------------CCcceEEECCCCC-EEEEECCCCCCeEEE
Confidence 00000000 00 0000112445664 45555433 578999
Q ss_pred EecCCCCeeeE-eccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCcee------eee
Q 016769 186 WDLNTAERCTR-LHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT------AMK 258 (383)
Q Consensus 186 Wdl~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~------~~~ 258 (383)
||+++++.+.. +.-.. +..+ .+.|.. ...+++.+.||.+.+|++...+.... .+.
T Consensus 136 ~d~~~~~~~~~~i~~~~--------------~~~v-~~~p~~---~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~ 197 (361)
T 2oiz_A 136 VDVAKGDYVEDVTAAAG--------------CWSV-IPQPNR---PRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFS 197 (361)
T ss_dssp EETTTTEEEEEEGGGTT--------------EEEE-EECTTS---SSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSC
T ss_pred EECCCCcEEEEEecCCC--------------ccee-EEcCCC---CeeEEEECCCCcEEEEEECCCCcEeeeccccceEc
Confidence 99999887666 43210 1111 122322 12466778899999999865333221 111
Q ss_pred ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec----C----CCCeEEEEECCCCcEEEEEeC---
Q 016769 259 VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL----E----RPGISGTSIRPDSKIAATAGW--- 327 (383)
Q Consensus 259 ~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~----~----~~~i~~~~~~p~~~~l~s~~~--- 327 (383)
.+..++ .+.+.+++..++..+.++.+.++|+............... . ..+...++|+|+++.+..+..
T Consensus 198 ~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~ 276 (361)
T 2oiz_A 198 VKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG 276 (361)
T ss_dssp TTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred CCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence 122222 1222334455566677889999998644322111100000 0 011223789999877666543
Q ss_pred --------CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 328 --------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 328 --------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.++|.+||+.+++.+.++..+. +.+++|+|||++|++++. +.|.+||+..
T Consensus 277 ~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t 334 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ 334 (361)
T ss_dssp CTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred CcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence 3589999999999999988777 899999999999988887 9999999753
No 161
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.60 E-value=2.1e-12 Score=114.15 Aligned_cols=115 Identities=14% Similarity=0.180 Sum_probs=83.5
Q ss_pred ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC-cEEEEEcCCC
Q 016769 261 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR-RVRIYNYRKG 339 (383)
Q Consensus 261 ~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg-~i~iwd~~~~ 339 (383)
...+..+++++++..+++...++.|.+||.+. ..............+.+++++|+++++++...++ .|++||. ++
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g 238 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG---QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DG 238 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETTC---CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TS
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCCC---CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CC
Confidence 34567889998877556666789999999743 2211111111124688999999999888887776 9999995 56
Q ss_pred ceEEEeccccc--ceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 340 SALAILKYHHA--TCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 340 ~~~~~~~~h~~--~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+.+..+..+.. .+.+++|+|+|+++++ +.|+.|++|++..
T Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 239 QLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp CEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred CEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 66666655433 4779999999987777 6799999999853
No 162
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.57 E-value=1.7e-13 Score=126.80 Aligned_cols=307 Identities=14% Similarity=0.002 Sum_probs=164.8
Q ss_pred CCeeeeeecCCc-----eeeEEEeCCCCeEEEecCC---CeEEEeeCcccccccccccccccceeeeeeecCCCCcceeE
Q 016769 9 DPVAVLRGHRAS-----VTDVCFHQTKPILFAGTTG---GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI 80 (383)
Q Consensus 9 ~~~~~l~gH~~~-----V~~v~f~~~~~~L~sgs~D---~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (383)
+.+..|..+... +.+++|+|||++|+..+.+ ..|.+||+.+++...... + .........++| ++++|+
T Consensus 21 ~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~-~-~~~~~~~~~~sp--dg~~l~ 96 (396)
T 3c5m_A 21 VKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE-G-KGDNTFGGFIST--DERAFF 96 (396)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC-S-SCBCTTTCEECT--TSSEEE
T ss_pred cceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec-C-CCCccccceECC--CCCEEE
Confidence 345556555444 8889999999987766443 468888987665332211 1 111112255677 467888
Q ss_pred ecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccc
Q 016769 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFE 160 (383)
Q Consensus 81 s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
.++.++.+.+||+++++.. .+......+ .......... ........ ..
T Consensus 97 ~~~~~~~l~~~d~~~~~~~-----~~~~~~~~~---~~~g~~l~~~----~~~~~~~~--------------------~~ 144 (396)
T 3c5m_A 97 YVKNELNLMKVDLETLEEQ-----VIYTVDEEW---KGYGTWVANS----DCTKLVGI--------------------EI 144 (396)
T ss_dssp EEETTTEEEEEETTTCCEE-----EEEECCTTE---EEEEEEEECT----TSSEEEEE--------------------EE
T ss_pred EEEcCCcEEEEECCCCCcE-----EEEeccccc---CCCCCEEEec----cCCccccc--------------------cc
Confidence 8888889999999876421 111100000 0000000000 00000000 00
Q ss_pred eecccCCCCCceeeecc----CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEE
Q 016769 161 IIDDVPAEGPKYMAVAG----EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG 236 (383)
Q Consensus 161 ~~~~~~~~~~~~~~~~g----~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 236 (383)
.....++++.. ++... ..+..|.+||+.+++......... . .....+.|. +...++..
T Consensus 145 ~~~~~spdg~~-~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~-----------~---~~~~~~sp~---dg~~l~~~ 206 (396)
T 3c5m_A 145 LKRDWQPLTSW-EKFAEFYHTNPTCRLIKVDIETGELEVIHQDTA-----------W---LGHPIYRPF---DDSTVGFC 206 (396)
T ss_dssp EGGGCCCCCSH-HHHHHHHHTCCCEEEEEEETTTCCEEEEEEESS-----------C---EEEEEEETT---EEEEEEEE
T ss_pred cccccCCCCcc-eeeeeeccCCCcceEEEEECCCCcEEeeccCCc-----------c---cccceECCC---CCCEEEEE
Confidence 00122344432 33221 345689999998877433222110 0 011123331 01123333
Q ss_pred eCC------CcEEEEeCCCCCCceeeeecc--ccCeEEEEEeCCCCceEEEEcC-----CcEEEEEccCCCCeeEEeeee
Q 016769 237 YED------GSILVWDIRNPGIPLTAMKVH--LEPVLCLSIDESCNGGISGGAD-----QKIVLYNLDHSTGSCVIKKEI 303 (383)
Q Consensus 237 ~~d------g~i~~wdl~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~s~~~d-----~~i~~wdl~~~~~~~~~~~~~ 303 (383)
+.+ ..|.+||+.... . ..+..+ ...+..+.|++++..++..+.+ +.|.+||++......+ ...
T Consensus 207 ~~~~~~~~~~~l~~~d~~~~~-~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l--~~~ 282 (396)
T 3c5m_A 207 HEGPHDLVDARMWLVNEDGSN-V-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEV--MVM 282 (396)
T ss_dssp ECSCSSSCSCCCEEEETTSCC-C-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEE--EEC
T ss_pred ecCCCCCCCceEEEEECCCCc-e-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEe--eeC
Confidence 322 468888886532 2 222222 2357778999999887766543 4499999875432211 111
Q ss_pred ecCCCCeEEEEECC-CCcEEEEEe----------------CCCcEEEEEcCCCceEEEeccccc-----------ceeEE
Q 016769 304 NLERPGISGTSIRP-DSKIAATAG----------------WDRRVRIYNYRKGSALAILKYHHA-----------TCNAV 355 (383)
Q Consensus 304 ~~~~~~i~~~~~~p-~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~h~~-----------~v~~v 355 (383)
.... ..|+| |+++++.++ .+..|++||+.+++.. .+..|.. .+..+
T Consensus 283 ----~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~ 356 (396)
T 3c5m_A 283 ----PPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHP 356 (396)
T ss_dssp ----CSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCC
T ss_pred ----CCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCc
Confidence 1233 88999 999888765 3478999999877643 3444443 25667
Q ss_pred EEeCCCCEEEEEeC-CCcEEEEeCC
Q 016769 356 SFSSDCKLMASASE-DSTVALWELY 379 (383)
Q Consensus 356 ~~spd~~~las~s~-d~~i~~w~~~ 379 (383)
+|+|||+.|+.++. ++...||.+.
T Consensus 357 ~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 357 SFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eEccCCCeEEEEecCCCCceEEEEE
Confidence 89999998877664 6677777653
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.57 E-value=1.5e-12 Score=119.48 Aligned_cols=276 Identities=9% Similarity=0.032 Sum_probs=158.5
Q ss_pred CeeeeeecCCceeeEEEeCCCCeEEEec----------CCCeEEEeeCccccccccccccc----ccceeeeeeecCCCC
Q 016769 10 PVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVHS----AAHGIVSVATGPSIG 75 (383)
Q Consensus 10 ~~~~l~gH~~~V~~v~f~~~~~~L~sgs----------~D~~v~vW~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 75 (383)
.+.++..+..+ .++|+|||++|+++. .|+.|.+||..+.+.+..+.... .......+++++ +
T Consensus 43 ~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp--d 118 (361)
T 2oiz_A 43 FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT--D 118 (361)
T ss_dssp EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT--T
T ss_pred EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECC--C
Confidence 34455555555 799999999999886 36789999988766655443221 011234567777 4
Q ss_pred cceeEecc--cCCeEEEeecCCCCCCCCCeee-eecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccc
Q 016769 76 LNKVISQG--RDGTVKCWDIENGGLSSNPSLT-IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDS 152 (383)
Q Consensus 76 ~~~l~s~~--~D~ti~~Wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (383)
+++|+.+. .+++|.+||+++++... . +.... ++
T Consensus 119 g~~l~v~n~~~~~~v~v~d~~~~~~~~----~~i~~~~------------------------~~---------------- 154 (361)
T 2oiz_A 119 GKFIVLQNASPATSIGIVDVAKGDYVE----DVTAAAG------------------------CW---------------- 154 (361)
T ss_dssp SSEEEEEEESSSEEEEEEETTTTEEEE----EEGGGTT------------------------EE----------------
T ss_pred CCEEEEECCCCCCeEEEEECCCCcEEE----EEecCCC------------------------cc----------------
Confidence 67777654 36899999998753100 0 00000 00
Q ss_pred cccCCccceecccCCCCCceeeeccCCcceEEEEecCC-CCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCce
Q 016769 153 KESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV 231 (383)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (383)
. ....++++..+ ++.+.++.+.+|+++. ++........ . .+........+ .+.+. +.
T Consensus 155 -------~--v~~~p~~~~~~-~~~~~dg~~~~v~~~~~g~~~~~~~~~-~----~~~~~~~~~~~---~~~~~---g~- 212 (361)
T 2oiz_A 155 -------S--VIPQPNRPRSF-MTICGDGGLLTINLGEDGKVASQSRSK-Q----MFSVKDDPIFI---APALD---KD- 212 (361)
T ss_dssp -------E--EEECTTSSSEE-EEEETTSSEEEEEECTTSSEEEEEECC-C----CSCTTTSCBCS---CCEEC---SS-
T ss_pred -------e--eEEcCCCCeeE-EEECCCCcEEEEEECCCCcEeeecccc-c----eEcCCCCceEE---Eeccc---CC-
Confidence 0 00112221112 2234467788888865 4332121100 0 00000000000 00111 11
Q ss_pred EEEEEeCCCcEEEEeCCCCCCce-eeeec------cc----cCeEEEEEeCCCCceEEEEc-----------CCcEEEEE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPL-TAMKV------HL----EPVLCLSIDESCNGGISGGA-----------DQKIVLYN 289 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~-~~~~~------h~----~~v~~~~~~~~~~~~~s~~~-----------d~~i~~wd 289 (383)
.++..+.++.|.++|+....... ..+.. +. .....+.+++++..++.+.. .+.|.+||
T Consensus 213 ~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD 292 (361)
T 2oiz_A 213 KAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMD 292 (361)
T ss_dssp EEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEE
T ss_pred EEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEE
Confidence 23445578899999986533211 11110 00 11112678888777665432 34789999
Q ss_pred ccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCC--ceEEEecccccceeEEEEeCCCC
Q 016769 290 LDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG--SALAILKYHHATCNAVSFSSDCK 362 (383)
Q Consensus 290 l~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~v~~spd~~ 362 (383)
+...+ . ...+..+. ..+++|+||++++++++. ++|.+||..++ +.+.++..+......++|+|||+
T Consensus 293 ~~t~~--~--v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 293 TKTKQ--R--VARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTTTE--E--EEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCCc--E--EEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 86542 2 22334443 889999999999998887 99999999999 98888766777888999999986
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.54 E-value=2.7e-12 Score=116.24 Aligned_cols=115 Identities=14% Similarity=0.104 Sum_probs=84.9
Q ss_pred cCeEEEEEeCC-CCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEE-------eCCCcEEE
Q 016769 262 EPVLCLSIDES-CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA-------GWDRRVRI 333 (383)
Q Consensus 262 ~~v~~~~~~~~-~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~-------~~dg~i~i 333 (383)
.....++++++ +..+++...+++|++||.+.. ..............+..++|+| +..+++. ..+.+|++
T Consensus 196 ~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~ 272 (329)
T 3fvz_A 196 SVPHSLALVPHLDQLCVADRENGRIQCFKTDTK--EFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFV 272 (329)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTTC--CEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEE
T ss_pred CCCcEEEEECCCCEEEEEECCCCEEEEEECCCC--cEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEE
Confidence 34678999998 555566667889999998733 3222221223345688899999 4333333 34559999
Q ss_pred EEcCCCceEEEec---ccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 334 YNYRKGSALAILK---YHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 334 wd~~~~~~~~~~~---~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
||..+++.+..+. ++...+..|+|+|||.++++...++.|++|++.
T Consensus 273 ~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 273 MNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 9999999888873 677789999999999999999999999999974
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.53 E-value=1.9e-13 Score=137.50 Aligned_cols=285 Identities=11% Similarity=0.088 Sum_probs=147.7
Q ss_pred CCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccc-cceee--eeeecCCCCcceeEecccC---------
Q 016769 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIV--SVATGPSIGLNKVISQGRD--------- 85 (383)
Q Consensus 18 ~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~l~s~~~D--------- 85 (383)
.....+++|+|||++|+++ |++|++||+.++++...+..+.. ...+. .+.++| ++++++.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp--dg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP--DGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT--TSSEEEEEEEEEECSSSCEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC--CCCEEEEEECCeeeEEEccc
Confidence 4456789999999999986 99999999988876544333321 11222 256787 56788877776
Q ss_pred CeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceeccc
Q 016769 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDV 165 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (383)
+.+.+||+++++.... ... + .......+
T Consensus 92 ~~~~~~d~~~~~~~~l-----~~~------------~-----------------------------------~~~~~~~~ 119 (740)
T 4a5s_A 92 ASYDIYDLNKRQLITE-----ERI------------P-----------------------------------NNTQWVTW 119 (740)
T ss_dssp EEEEEEETTTTEECCS-----SCC------------C-----------------------------------TTEEEEEE
T ss_pred eEEEEEECCCCcEEEc-----ccC------------C-----------------------------------CcceeeEE
Confidence 4456999887642110 000 0 00111235
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCC-----CCceEEEEEeCCC
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS-----QGFVNVLAGYEDG 240 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~sg~~dg 240 (383)
+++|+.+..+ .++.|++||+.++... ++..+. .....+. . .++.. .+....+.=+-||
T Consensus 120 SPdG~~la~~---~~~~i~~~~~~~~~~~-~lt~~g--------~~~~~~~-g----~~~~v~~ee~~~~~~~~~wSpDg 182 (740)
T 4a5s_A 120 SPVGHKLAYV---WNNDIYVKIEPNLPSY-RITWTG--------KEDIIYN-G----ITDWVYEEEVFSAYSALWWSPNG 182 (740)
T ss_dssp CSSTTCEEEE---ETTEEEEESSTTSCCE-ECCSCC--------BTTTEEE-S----BCCHHHHHHTSSSSBCEEECTTS
T ss_pred CCCCCEEEEE---ECCeEEEEECCCCceE-EEcCCC--------Cccceec-C----cccccccchhcCCCcceEECCCC
Confidence 6777654332 5999999999887632 332110 0000000 0 00000 0000012224455
Q ss_pred cEEEE-eCCCCCCceeeeec------cccCeEEEEEeCCCCceEEEEcCCcEEEEEccC---CCCeeEEeeee----ecC
Q 016769 241 SILVW-DIRNPGIPLTAMKV------HLEPVLCLSIDESCNGGISGGADQKIVLYNLDH---STGSCVIKKEI----NLE 306 (383)
Q Consensus 241 ~i~~w-dl~~~~~~~~~~~~------h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~---~~~~~~~~~~~----~~~ 306 (383)
.-..+ .........-.+.. +...+..+.+...+.. .....|.+||++. ........... ..+
T Consensus 183 ~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~ 258 (740)
T 4a5s_A 183 TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIG 258 (740)
T ss_dssp SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTS
T ss_pred CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCCcceEEEecCCccCCCC
Confidence 43322 22111111111100 1122333333322211 1122578899876 42101111111 014
Q ss_pred CCCeEEEEECCCCcEEEEEeC----CCcEEEEEcCCCc----eE--EEe--ccccccee-----EEEEeCCCCEEE-EEe
Q 016769 307 RPGISGTSIRPDSKIAATAGW----DRRVRIYNYRKGS----AL--AIL--KYHHATCN-----AVSFSSDCKLMA-SAS 368 (383)
Q Consensus 307 ~~~i~~~~~~p~~~~l~s~~~----dg~i~iwd~~~~~----~~--~~~--~~h~~~v~-----~v~~spd~~~la-s~s 368 (383)
...+..++|+||++.++.... +.+|++||+.+++ +. ..+ ..|...+. ..+|+|||+.|+ ..+
T Consensus 259 ~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s 338 (740)
T 4a5s_A 259 DHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS 338 (740)
T ss_dssp CEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEE
T ss_pred CeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEE
Confidence 456889999999996665533 3479999998887 11 111 34665554 788999999877 665
Q ss_pred -CCC--cEEEEeCC
Q 016769 369 -EDS--TVALWELY 379 (383)
Q Consensus 369 -~d~--~i~~w~~~ 379 (383)
.+| .|.+||+.
T Consensus 339 ~~~G~~~l~~~~~~ 352 (740)
T 4a5s_A 339 NEEGYRHICYFQID 352 (740)
T ss_dssp CTTSCEEEEEEETT
T ss_pred cCCCceEEEEEECC
Confidence 444 45666653
No 166
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.51 E-value=8.8e-13 Score=132.10 Aligned_cols=312 Identities=10% Similarity=-0.027 Sum_probs=163.5
Q ss_pred eeeeeecCC---ceeeEEEeCCCCeEEEecC---------CCeEEEeeCcccccccccccccccceeeeeeecCCCCcce
Q 016769 11 VAVLRGHRA---SVTDVCFHQTKPILFAGTT---------GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNK 78 (383)
Q Consensus 11 ~~~l~gH~~---~V~~v~f~~~~~~L~sgs~---------D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (383)
...+.+|.. .|.+++|||||++|++++. |+.|++||+.+++.+..... ...+..++++| ++++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SP--DG~~ 123 (719)
T 1z68_A 49 YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSP--VGSK 123 (719)
T ss_dssp EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECS--STTC
T ss_pred EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECC--CCCE
Confidence 334445544 4999999999999999887 79999999987765211111 12466788998 4677
Q ss_pred eEecccCCeEEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCc
Q 016769 79 VISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRS 158 (383)
Q Consensus 79 l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (383)
|+.+. |++|++|++.+++.... + ....... +.... ...++.-+.. .
T Consensus 124 la~~~-~~~i~~~~~~~g~~~~l---~-~~~~~~~----v~~g~---------~~~v~~ee~~----------------~ 169 (719)
T 1z68_A 124 LAYVY-QNNIYLKQRPGDPPFQI---T-FNGRENK----IFNGI---------PDWVYEEEML----------------A 169 (719)
T ss_dssp EEEEE-TTEEEEESSTTSCCEEC---C-CCCBTTT----EEESS---------CCHHHHHHTT----------------C
T ss_pred EEEEE-CCeEEEEeCCCCCcEEE---e-cCCCcCC----eEccc---------ccceeeeecc----------------c
Confidence 77764 78999999987643110 0 0000000 00000 0000000000 0
Q ss_pred cceecccCCCCCceeeecc--------------------------------CCcceEEEEecCCCCee--eEeccCcCCC
Q 016769 159 FEIIDDVPAEGPKYMAVAG--------------------------------EQLSEVEIWDLNTAERC--TRLHQNSCGG 204 (383)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~g--------------------------------~~~~~i~~Wdl~~~~~~--~~~~~~~~~~ 204 (383)
......++++|+.++..+. .....|++||+.+++.. ..+....
T Consensus 170 ~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~--- 246 (719)
T 1z68_A 170 TKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPA--- 246 (719)
T ss_dssp SSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCH---
T ss_pred CcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCc---
Confidence 0000112233332111111 11237899999887642 1221100
Q ss_pred CCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCC----CcEEEEe----CCCCCCceeee----eccccCeE-----EE
Q 016769 205 SPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED----GSILVWD----IRNPGIPLTAM----KVHLEPVL-----CL 267 (383)
Q Consensus 205 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~d----g~i~~wd----l~~~~~~~~~~----~~h~~~v~-----~~ 267 (383)
.+.. ....... ..++|+ + ..+++.... ..|.+|| +.++. ....+ ..|...+. .+
T Consensus 247 --~~~~-~~~~~~~-~~~SpD---~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ 317 (719)
T 1z68_A 247 --MIAS-SDYYFSW-LTWVTD---E-RVCLQWLKRVQNVSVLSICDFREDWQTWD-CPKTQEHIEESRTGWAGGFFVSTP 317 (719)
T ss_dssp --HHHT-SCEEEEE-EEESSS---S-EEEEEEEESSTTEEEEEEEEECSSSSSEE-CCGGGEEEEECSSSCSSSSSCCCC
T ss_pred --cCCC-CcceEEE-eEEeCC---C-eEEEEEeccccCeEEEEEEcccCCCCCCc-eEEEEecccccCCceEccccCCcc
Confidence 0000 0111111 235554 2 234443322 2488899 65532 22233 34555555 77
Q ss_pred EEeCCCCceEE--EEcCCc--EEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC-----CcEEEEEcCC
Q 016769 268 SIDESCNGGIS--GGADQK--IVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRK 338 (383)
Q Consensus 268 ~~~~~~~~~~s--~~~d~~--i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d-----g~i~iwd~~~ 338 (383)
.|++++..++. ...++. |.+||++... . ..+......+..+.+. +++.|+..+.+ +++++|.+..
T Consensus 318 ~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~--~---~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 318 VFSYDAISYYKIFSDKDGYKHIHYIKDTVEN--A---IQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EECTTSSCEEEEEECTTSCEEEEEESSCSTT--C---EECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred EECCCCCeEEEEEEccCCceEEEEEECCCCc--e---EecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 89999886543 445664 5555654332 1 1222233456676666 77777666665 8899998864
Q ss_pred --Cc-eEEEec----ccccceeEEEEeCCCCEEEE-EeCC--CcEEEEeCC
Q 016769 339 --GS-ALAILK----YHHATCNAVSFSSDCKLMAS-ASED--STVALWELY 379 (383)
Q Consensus 339 --~~-~~~~~~----~h~~~v~~v~~spd~~~las-~s~d--~~i~~w~~~ 379 (383)
+. ....+. +|...+..+.|+||+++++. ++.+ ..+.+||+.
T Consensus 392 ~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~ 442 (719)
T 1z68_A 392 GSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGR 442 (719)
T ss_dssp SSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSS
T ss_pred CCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECC
Confidence 32 123333 26667888999999997664 4444 367788764
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.51 E-value=1.1e-11 Score=122.93 Aligned_cols=137 Identities=15% Similarity=0.044 Sum_probs=87.3
Q ss_pred CcEEEEeCCCCC---CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecC------CCCe
Q 016769 240 GSILVWDIRNPG---IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE------RPGI 310 (383)
Q Consensus 240 g~i~~wdl~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~------~~~i 310 (383)
..|.+||+...+ ........|...+..+.|++++..+++++.++..+||.++..++........... ...+
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~ 296 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGM 296 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccC
Confidence 479999998323 3333334456788999999999866777778855555444323322111111000 0115
Q ss_pred EEEEECCCCcEEEEEeCCCcEEEE--EcCCCceEEEecccccceeEE-EEeCCCCEEEEEeCCCcEEEEeC
Q 016769 311 SGTSIRPDSKIAATAGWDRRVRIY--NYRKGSALAILKYHHATCNAV-SFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~~h~~~v~~v-~~spd~~~las~s~d~~i~~w~~ 378 (383)
..++|+|+++++++++. ++++|| |+..++ +..+..|...+..+ +++++.-.+++++.+....+|.+
T Consensus 297 ~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 297 RWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp CSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred ceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEE
Confidence 67899999999999998 999999 444444 67777787777776 55444335566777766666644
No 168
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.50 E-value=4.7e-12 Score=115.15 Aligned_cols=196 Identities=14% Similarity=0.191 Sum_probs=117.9
Q ss_pred cCCCCCceeeecc-CCcceEEEEecCCCCe--eeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEe-CCC
Q 016769 165 VPAEGPKYMAVAG-EQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY-EDG 240 (383)
Q Consensus 165 ~~~~~~~~~~~~g-~~~~~i~~Wdl~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~-~dg 240 (383)
++++++ +++++. +.++.|++||+.++.. +..+.... .....+ .+.|+ +. .+++++ .++
T Consensus 47 ~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~----------~~p~~~---a~spd---g~-~l~~~~~~~~ 108 (347)
T 3hfq_A 47 LSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPG----------TPPAYV---AVDEA---RQ-LVYSANYHKG 108 (347)
T ss_dssp ECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEES----------CCCSEE---EEETT---TT-EEEEEETTTT
T ss_pred EccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCC----------CCCEEE---EECCC---CC-EEEEEeCCCC
Confidence 345555 333332 2368999999976652 22221110 011111 23333 22 355544 789
Q ss_pred cEEEEeCCCCCCc--eeeeec---------cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec-CCC
Q 016769 241 SILVWDIRNPGIP--LTAMKV---------HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL-ERP 308 (383)
Q Consensus 241 ~i~~wdl~~~~~~--~~~~~~---------h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~-~~~ 308 (383)
.|.+||+...+.. +..+.. +...+.++.+++++..+++...++.|.+|+++.. +.......... ...
T Consensus 109 ~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~-g~~~~~~~~~~~~g~ 187 (347)
T 3hfq_A 109 TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA-GQLSEQSVLTMEAGF 187 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT-SCEEEEEEEECCTTC
T ss_pred EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC-CcEEEeeeEEcCCCC
Confidence 9999999643321 122211 1123778999999984444556788999999832 22222222222 233
Q ss_pred CeEEEEECCCCcEEEE-EeCCCcEEEEEcCC--Cce--EEEecccc------cceeEEEEeCCCCEE-EEEeCCCcEEEE
Q 016769 309 GISGTSIRPDSKIAAT-AGWDRRVRIYNYRK--GSA--LAILKYHH------ATCNAVSFSSDCKLM-ASASEDSTVALW 376 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s-~~~dg~i~iwd~~~--~~~--~~~~~~h~------~~v~~v~~spd~~~l-as~s~d~~i~~w 376 (383)
....++|+|||+++++ ...++.|++|+++. ++. +..+.... ..+..++|+|||++| ++...++.|.+|
T Consensus 188 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~ 267 (347)
T 3hfq_A 188 GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVF 267 (347)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEE
T ss_pred CCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEE
Confidence 6788999999996555 56789999999974 442 22232222 348889999999976 667779999999
Q ss_pred eCC
Q 016769 377 ELY 379 (383)
Q Consensus 377 ~~~ 379 (383)
++.
T Consensus 268 ~~~ 270 (347)
T 3hfq_A 268 AVT 270 (347)
T ss_dssp EEC
T ss_pred EEC
Confidence 985
No 169
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.44 E-value=6e-11 Score=105.40 Aligned_cols=258 Identities=12% Similarity=0.053 Sum_probs=150.1
Q ss_pred CCeeeeeecCCceeeEEEeCCCC-eEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCe
Q 016769 9 DPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (383)
Q Consensus 9 ~~~~~l~gH~~~V~~v~f~~~~~-~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~t 87 (383)
..+.++..+.....+++|+|+++ +++++..++.|.+|+..++ ...... ....+.++++.+ +++.+++...++.
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~l~~~~--dg~l~v~~~~~~~ 91 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH--PSHHQNGHCLNK--QGHLIACSHGLRR 91 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES--SCSSEEEEEECT--TCCEEEEETTTTE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC--CCCCcceeeECC--CCcEEEEecCCCe
Confidence 34566777888889999999998 8889999999999998765 222211 223456777777 4566677777889
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPA 167 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (383)
|.+||..++.... + ....... .... ..-..+.+
T Consensus 92 i~~~d~~~g~~~~-----~------------~~~~~~~--~~~~----------------------------~~~i~~d~ 124 (296)
T 3e5z_A 92 LERQREPGGEWES-----I------------ADSFEGK--KLNS----------------------------PNDVCLAP 124 (296)
T ss_dssp EEEECSTTCCEEE-----E------------ECEETTE--ECCC----------------------------CCCEEECT
T ss_pred EEEEcCCCCcEEE-----E------------eeccCCC--CCCC----------------------------CCCEEECC
Confidence 9999987663100 0 0000000 0000 00000112
Q ss_pred CCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 168 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 168 ~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
+|. ++++. ...++...++ .. .. . .....+.|..+|.
T Consensus 125 ~G~-l~vtd-~~~g~~~~~~---~~-----~~-------~---------------------------~~~~~~~l~~~~~ 160 (296)
T 3e5z_A 125 DGS-LWFSD-PTYGIDKPEE---GY-----GG-------E---------------------------MELPGRWVFRLAP 160 (296)
T ss_dssp TSC-EEEEE-CSHHHHCGGG---SS-----CC-------C---------------------------CCSSSCEEEEECT
T ss_pred CCC-EEEEC-Cccccccccc---cc-----cc-------c---------------------------ccCCCcEEEEECC
Confidence 222 11110 0000000000 00 00 0 0000223333443
Q ss_pred CCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCee-EEeeeeecCCCCeEEEEECCCCcEEEEEe
Q 016769 248 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC-VIKKEINLERPGISGTSIRPDSKIAATAG 326 (383)
Q Consensus 248 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~-~~~~~~~~~~~~i~~~~~~p~~~~l~s~~ 326 (383)
. +. ...+..+......+++++++..+++.+.++.|.+|+++. ++.. ............+.+++++++|++.++.
T Consensus 161 ~--g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~-~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~- 235 (296)
T 3e5z_A 161 D--GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNA-RGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA- 235 (296)
T ss_dssp T--SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECS-SSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-
T ss_pred C--CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECC-CCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-
Confidence 2 11 223334455667899999998876666788999999872 2222 1111112233456789999999877665
Q ss_pred CCCcEEEEEcCCCceEEEecccccceeEEEE-eCCCCEEEEEeCCC
Q 016769 327 WDRRVRIYNYRKGSALAILKYHHATCNAVSF-SSDCKLMASASEDS 371 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~-spd~~~las~s~d~ 371 (383)
++.|.+||.+ ++.+..+..+.. +.+++| +||++.|..++.++
T Consensus 236 -~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 236 -GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp -TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred -CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 8899999986 777777877777 999999 58999888888874
No 170
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.43 E-value=8.2e-12 Score=113.15 Aligned_cols=153 Identities=8% Similarity=0.041 Sum_probs=96.3
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
+++++..++.|++||+.+++.+..+..... + ....+ .+.|+ +...++++..++.|.+||+.+..
T Consensus 13 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-----~----~~~~~---~~s~d---g~~~~v~~~~~~~i~~~d~~t~~- 76 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASDTVYKSCVMPDK-----F----GPGTA---MMAPD---NRTAYVLNNHYGDIYGIDLDTCK- 76 (349)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECSSC-----C----SSCEE---EECTT---SSEEEEEETTTTEEEEEETTTTE-
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEecCCC-----C----CCcee---EECCC---CCEEEEEeCCCCcEEEEeCCCCc-
Confidence 344555678999999999887666542110 0 00111 23333 22234566778999999998643
Q ss_pred ceeeeecc------ccCeEEEEEeCCCCceEEEEcC------------CcEEEEEccCCCCeeEEeeeeecCCCCeEEEE
Q 016769 253 PLTAMKVH------LEPVLCLSIDESCNGGISGGAD------------QKIVLYNLDHSTGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 253 ~~~~~~~h------~~~v~~~~~~~~~~~~~s~~~d------------~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~ 314 (383)
....+..+ ...+..+.++++++.+++++.+ +.|.+||+......... .... ....+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~-~~~~~~~~~ 154 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV-RTFP-MPRQVYLMR 154 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS-EEEE-CCSSCCCEE
T ss_pred EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccccee-eecc-CCCccccee
Confidence 33334322 2236788999999988888765 89999999752211111 1111 223578899
Q ss_pred ECCCCcEEEEEeCCCcEEEEEcCCCceEEEec
Q 016769 315 IRPDSKIAATAGWDRRVRIYNYRKGSALAILK 346 (383)
Q Consensus 315 ~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 346 (383)
|+|+++ +++++ +.|++||+.+++....+.
T Consensus 155 ~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 155 AADDGS-LYVAG--PDIYKMDVKTGKYTVALP 183 (349)
T ss_dssp ECTTSC-EEEES--SSEEEECTTTCCEEEEEC
T ss_pred ECCCCc-EEEcc--CcEEEEeCCCCceecccc
Confidence 999999 55554 349999999888766554
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.43 E-value=3.5e-11 Score=110.42 Aligned_cols=141 Identities=11% Similarity=0.047 Sum_probs=97.3
Q ss_pred CCCcEEEEeCCCCCCceeeee----ccccCeEEEEEeCCCCceEEEEc-CCcEEEEEccCCCCeeEEeeeeec--CCCCe
Q 016769 238 EDGSILVWDIRNPGIPLTAMK----VHLEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINL--ERPGI 310 (383)
Q Consensus 238 ~dg~i~~wdl~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~~~~~~~--~~~~i 310 (383)
.++++.+|++...+.....+. .+...+..+.|+++++.+++++. ++.|.+|+++. ++.......... +...+
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~-~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLA-SGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT-TSCEEEEEEEECSSTTCCE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECC-CCCEEEeeeEecCCCCCCC
Confidence 689999999975343333333 13457889999999988777654 67899999973 233222222221 24568
Q ss_pred EEEEECCCCcEEEEEeC-CCcEEEEEcC--CCceE------EEec----cccc------ceeEEE-EeCCCCEEEEEeCC
Q 016769 311 SGTSIRPDSKIAATAGW-DRRVRIYNYR--KGSAL------AILK----YHHA------TCNAVS-FSSDCKLMASASED 370 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~-dg~i~iwd~~--~~~~~------~~~~----~h~~------~v~~v~-~spd~~~las~s~d 370 (383)
..++|+|||+++++++. +++|.+|+++ +++.. ..+. +|.. .+..++ |+|||++|++++.+
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 99999999999887775 7899999875 45532 1221 2222 588999 99999988776643
Q ss_pred C------cEEEEeCC
Q 016769 371 S------TVALWELY 379 (383)
Q Consensus 371 ~------~i~~w~~~ 379 (383)
. .|.+|++.
T Consensus 276 ~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 276 NKFELQGYIAGFKLR 290 (365)
T ss_dssp SSTTSCCEEEEEEEC
T ss_pred CCCCCCCeEEEEEEC
Confidence 3 89999985
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.37 E-value=1.7e-10 Score=115.49 Aligned_cols=139 Identities=8% Similarity=-0.009 Sum_probs=87.1
Q ss_pred CCcEEEEeCCC------CCCceeeeeccccCeEEEEEeCCCCceEEEEcC----CcEEEEEccCCCCeeEEeeeeecCC-
Q 016769 239 DGSILVWDIRN------PGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD----QKIVLYNLDHSTGSCVIKKEINLER- 307 (383)
Q Consensus 239 dg~i~~wdl~~------~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d----~~i~~wdl~~~~~~~~~~~~~~~~~- 307 (383)
+..|.+||+.+ +......+..+...+.. .+++++..++..+.+ ..|.+||++....... ..+..+.
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~--~~l~~~~~ 334 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKW--KVLVPEHE 334 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC--EEEECCCS
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc--eeccCCCC
Confidence 45677777654 22123344445444433 356666666544432 3588898875431100 1111122
Q ss_pred -CCeEEEEECCCCcEEEEEeCCCc--EEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEE-e---CCCcEEEEeCCC
Q 016769 308 -PGISGTSIRPDSKIAATAGWDRR--VRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASA-S---EDSTVALWELYP 380 (383)
Q Consensus 308 -~~i~~~~~~p~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~-s---~d~~i~~w~~~~ 380 (383)
..+.++++++++.+++++..|+. |++||+.+++.+..+..+...+..++++|+++.++.. + ..+.|.+||+..
T Consensus 335 ~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 335 KDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred CCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 25778888888888899888985 5556776788777787788888999999999865532 2 346889998853
No 173
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.31 E-value=1.7e-09 Score=94.27 Aligned_cols=115 Identities=12% Similarity=0.024 Sum_probs=82.3
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceE
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL 342 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~ 342 (383)
....+.+++++...++...++.|.+||.+.... . .........+.++++.++|..+++...++.|.+||.......
T Consensus 151 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~--~--~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 151 DPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ--V--VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST 226 (270)
T ss_dssp SCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE--E--ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE
T ss_pred CceeEEEeCCCCEEEEECCCCEEEEEecCCCce--E--eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce
Confidence 445677887776445555577899998764321 1 111112256889999999988887777899999999765443
Q ss_pred EEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 343 AILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 343 ~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
.....+...+.+++++|+|+++++.+.++.|+++++..+
T Consensus 227 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 227 VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp ECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred eeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 322234467899999999999999999999999998643
No 174
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.30 E-value=1.9e-10 Score=114.82 Aligned_cols=98 Identities=8% Similarity=-0.027 Sum_probs=64.8
Q ss_pred CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcC-CCceEEEeccc-ccceeEEEEeC
Q 016769 282 DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR-KGSALAILKYH-HATCNAVSFSS 359 (383)
Q Consensus 282 d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~h-~~~v~~v~~sp 359 (383)
++.|.+||++..................+.+++++ ++.++++...|++.+||.++ +++....+..+ ...+..++++|
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~ 372 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLE 372 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCT
T ss_pred CCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCC
Confidence 57788898865431100011111113357778887 77889999999999998775 46656666555 66788889999
Q ss_pred CCCEEE----EEeCCCcEEEEeCCC
Q 016769 360 DCKLMA----SASEDSTVALWELYP 380 (383)
Q Consensus 360 d~~~la----s~s~d~~i~~w~~~~ 380 (383)
|++.++ +....+.|++||+..
T Consensus 373 d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 373 DLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp TCSEEEEEEEETTEEEEEEEEETTT
T ss_pred CCCEEEEEEcCCCCCCEEEEEECCC
Confidence 998766 333346899999853
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.30 E-value=1.2e-08 Score=91.83 Aligned_cols=108 Identities=10% Similarity=0.081 Sum_probs=72.4
Q ss_pred cCeEEEEEeCCCCceEE-EEcCCcEEEEEccCCCCe-eEEeee-e-ecC-CCCeEEEEECCCCcEEEEEeCCCcEEEEEc
Q 016769 262 EPVLCLSIDESCNGGIS-GGADQKIVLYNLDHSTGS-CVIKKE-I-NLE-RPGISGTSIRPDSKIAATAGWDRRVRIYNY 336 (383)
Q Consensus 262 ~~v~~~~~~~~~~~~~s-~~~d~~i~~wdl~~~~~~-~~~~~~-~-~~~-~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~ 336 (383)
..+..+.+++++..++. ...++.|.+||++..... ..+... . ... ...+..++++++++++++...++.|.+||.
T Consensus 182 ~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 182 SVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred CcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 34677889998875544 445788999998642211 111101 1 111 135788999999998888888899999998
Q ss_pred CCCceEEEeccccc------ceeEEEEeCCCCEEEEEeCC
Q 016769 337 RKGSALAILKYHHA------TCNAVSFSSDCKLMASASED 370 (383)
Q Consensus 337 ~~~~~~~~~~~h~~------~v~~v~~spd~~~las~s~d 370 (383)
+++.+..+..+.. .+.+++|+||++.|..++.+
T Consensus 262 -~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 262 -RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp -TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred -CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 5666666654432 68999999998766554444
No 176
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.28 E-value=6.5e-09 Score=100.54 Aligned_cols=285 Identities=15% Similarity=0.064 Sum_probs=168.1
Q ss_pred eCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecC--CCCCCCCCee
Q 016769 27 HQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE--NGGLSSNPSL 104 (383)
Q Consensus 27 ~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~--~~~~~~~~~~ 104 (383)
.|.+.++++...+++|.++|..+++.+..+..... ...+.+++ +++++++++.|++|.+||+. +++. ..
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~---p~~v~~Sp--DGr~lyv~~~dg~V~viD~~~~t~~~----v~ 234 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA---VHISRLSA--SGRYLFVIGRDGKVNMIDLWMKEPTT----VA 234 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSC---EEEEEECT--TSCEEEEEETTSEEEEEETTSSSCCE----EE
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCC---ccceEECC--CCCEEEEEcCCCeEEEEECCCCCCcE----eE
Confidence 45556788889999999999988776655443322 23567887 46788888899999999985 3321 00
Q ss_pred eeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccC----CCCCceeeeccCCc
Q 016769 105 TIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP----AEGPKYMAVAGEQL 180 (383)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~ 180 (383)
.+..+.. + .-..++ ++| +++.++....
T Consensus 235 ~i~~G~~----------P--------------------------------------~~ia~s~~~~pDG-k~l~v~n~~~ 265 (567)
T 1qks_A 235 EIKIGSE----------A--------------------------------------RSIETSKMEGWED-KYAIAGAYWP 265 (567)
T ss_dssp EEECCSE----------E--------------------------------------EEEEECCSTTCTT-TEEEEEEEET
T ss_pred EEecCCC----------C--------------------------------------ceeEEccccCCCC-CEEEEEEccC
Confidence 1110000 0 001123 244 4677777777
Q ss_pred ceEEEEecCCCCeeeEeccCcC-CCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc-eeeee
Q 016769 181 SEVEIWDLNTAERCTRLHQNSC-GGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP-LTAMK 258 (383)
Q Consensus 181 ~~i~~Wdl~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~-~~~~~ 258 (383)
+.+.++|..+.+.+..+.-... .....+.+..+. .++. ..+. +...++.-..+|.|.++|....... +..+.
T Consensus 266 ~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rv--a~i~-~s~~---~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~ 339 (567)
T 1qks_A 266 PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRV--AAIL-ASHY---RPEFIVNVKETGKILLVDYTDLNNLKTTEIS 339 (567)
T ss_dssp TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCE--EEEE-ECSS---SSEEEEEETTTTEEEEEETTCSSEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEeccccccccccccCCCce--EEEE-EcCC---CCEEEEEecCCCeEEEEecCCCccceeeeee
Confidence 8999999999887766542110 000000011111 1111 1221 2234556677899999998764321 11121
Q ss_pred ccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeeee-e--cCCC-CeEEEEECCCCcEE-EEEe-CCCcE
Q 016769 259 VHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEI-N--LERP-GISGTSIRPDSKIA-ATAG-WDRRV 331 (383)
Q Consensus 259 ~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~-~--~~~~-~i~~~~~~p~~~~l-~s~~-~dg~i 331 (383)
.......+.|+++++++++++ .++.|.++|+.... ....... . .+.+ +++ .++|++..+ +++. .+++|
T Consensus 340 -~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k--l~~~i~vgg~~Phpg~g~~--~~~p~~g~v~~t~~~g~~~V 414 (567)
T 1qks_A 340 -AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK--LVAIEDTGGQTPHPGRGAN--FVHPTFGPVWATSHMGDDSV 414 (567)
T ss_dssp -CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE--EEEEEECSSSSBCCTTCEE--EEETTTEEEEEEEBSSSSEE
T ss_pred -ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc--EEEEEeccCcCCCCcccee--eECCCCCcEEEeCCCCCCeE
Confidence 123345778999999876655 57889999987542 2211111 1 1111 222 268875544 4443 46899
Q ss_pred EEEEcCC-------CceEEEecccccceeEEEEeCCCCEEEEEeC-------CCcEEEEeCCC
Q 016769 332 RIYNYRK-------GSALAILKYHHATCNAVSFSSDCKLMASASE-------DSTVALWELYP 380 (383)
Q Consensus 332 ~iwd~~~-------~~~~~~~~~h~~~v~~v~~spd~~~las~s~-------d~~i~~w~~~~ 380 (383)
.++|.++ .+.+.++......-..+.++||+++|-.... .+.|.++|+..
T Consensus 415 svid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 415 ALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 477 (567)
T ss_dssp EEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred EEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence 9999987 5566776654333355778999998776553 35899999853
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.25 E-value=3.9e-09 Score=95.59 Aligned_cols=121 Identities=10% Similarity=0.068 Sum_probs=77.0
Q ss_pred cEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCC--------cEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 241 SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ--------KIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 241 ~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~--------~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
...||.+.+ +. ...+..+ ..+..+ ++++..++..+.+. .|.+|| ++... .....+...+..
T Consensus 199 ~~~l~~~d~-~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d----~~~~~--~l~~~~~~~~~~ 267 (347)
T 2gop_A 199 FWDIYIWED-GK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD----GKEVM--GILDEVDRGVGQ 267 (347)
T ss_dssp CEEEEEEET-TE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC----SSCEE--ESSTTCCSEEEE
T ss_pred cccEEEeCC-Cc-eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC----CCceE--eccccCCcccCC
Confidence 345554442 33 2334334 444444 77888777766443 466665 22211 112223345665
Q ss_pred -EEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcE-EEEeC
Q 016769 313 -TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTV-ALWEL 378 (383)
Q Consensus 313 -~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i-~~w~~ 378 (383)
+.|+ |+ ++++++.+++++|| +.+++.. .+..+...|.+++|+| +++++++.++.. +||.+
T Consensus 268 ~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 268 AKIKD-GK-VYFTLFEEGSVNLY-IWDGEIK-PIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp EEEET-TE-EEEEEEETTEEEEE-EESSSEE-EEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEE
T ss_pred ccEEc-Cc-EEEEEecCCcEEEE-EcCCceE-EEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEe
Confidence 8899 88 88999999999999 8866554 3444577899999999 777777777765 78865
No 178
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.24 E-value=2.9e-08 Score=87.50 Aligned_cols=283 Identities=5% Similarity=-0.055 Sum_probs=159.2
Q ss_pred eeecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeec
Q 016769 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (383)
Q Consensus 14 l~gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~ 93 (383)
+..+...+.+|+++++|++.++...++.|.+||.. ++. ..............+++.+ ++..+++...++.|..||.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYPLPTPDAKVMCLTISS--DGEVWFTENAANKIGRITK 85 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECT
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEecCCcccCceeeEEECC--CCCEEEeCCCCCeEEEECC
Confidence 44566789999999999988877778999999987 332 1111111123455667766 3566677677888999987
Q ss_pred CCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCcee
Q 016769 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYM 173 (383)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (383)
+ +.. .. +.+ +.. ... .......+++. ++
T Consensus 86 ~-g~~-----~~----------~~~---~~~-------~~~-------------------------~~~i~~~~~g~-l~ 113 (299)
T 2z2n_A 86 K-GII-----KE----------YTL---PNP-------DSA-------------------------PYGITEGPNGD-IW 113 (299)
T ss_dssp T-SCE-----EE----------EEC---SST-------TCC-------------------------EEEEEECTTSC-EE
T ss_pred C-CcE-----EE----------EeC---CCc-------CCC-------------------------ceeeEECCCCC-EE
Confidence 5 210 00 000 000 000 00001123333 22
Q ss_pred eeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCc
Q 016769 174 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 253 (383)
Q Consensus 174 ~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~ 253 (383)
++...++.|..||. +++.. ...... .......+. +.+ .+. ..++...++.|..||. +....
T Consensus 114 -v~~~~~~~i~~~d~-~g~~~-~~~~~~--------~~~~~~~i~---~~~---~g~-l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 114 -FTEMNGNRIGRITD-DGKIR-EYELPN--------KGSYPSFIT---LGS---DNA-LWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp -EEETTTTEEEEECT-TCCEE-EEECSS--------TTCCEEEEE---ECT---TSC-EEEEETTTTEEEEECT-TCCEE
T ss_pred -EEecCCceEEEECC-CCCEE-EecCCC--------CCCCCceEE---EcC---CCC-EEEEeCCCCEEEEEcC-CCcEE
Confidence 33333567888988 44422 111100 000111111 111 222 3444555788999998 43221
Q ss_pred eeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEE
Q 016769 254 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 333 (383)
Q Consensus 254 ~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~i 333 (383)
......+...+..+.+++++...++...++.|.+||. ... ... .........+.++++.++++..++...++.|..
T Consensus 175 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~--~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 250 (299)
T 2z2n_A 175 EFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE--ITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGR 250 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC--EEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEE
T ss_pred EeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc--EEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEE
Confidence 1112233456778999988765454445788999987 322 211 112223356889999999997776667899999
Q ss_pred EEcCCCceEE-EecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 334 YNYRKGSALA-ILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 334 wd~~~~~~~~-~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
||. +++... .+..+...+.++++ ++|++.++.+. +.|..++.
T Consensus 251 ~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~-~~l~~~~~ 293 (299)
T 2z2n_A 251 LTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMEC-DKIGKLTL 293 (299)
T ss_dssp EET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETT-TEEEEEEE
T ss_pred ECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecC-CcEEEEEc
Confidence 998 454322 23345567899999 99988777664 45555554
No 179
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.20 E-value=5.3e-10 Score=112.33 Aligned_cols=191 Identities=9% Similarity=0.038 Sum_probs=120.5
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcC-CCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCC-----
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSC-GGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED----- 239 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~d----- 239 (383)
.+++ ++++. + +++|++||+.+++....+..... .....+ .-..++|+. ..++.++.+
T Consensus 25 ~~dg-~~~~~-~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~Spdg----~~l~~~~~~~~~~r 87 (740)
T 4a5s_A 25 ISDH-EYLYK-Q--ENNILVFNAEYGNSSVFLENSTFDEFGHSI---------NDYSISPDG----QFILLEYNYVKQWR 87 (740)
T ss_dssp CSSS-EEEEE-E--TTEEEEEETTTCCEEEEECTTTTTTCCSCC---------CEEEECTTS----SEEEEEEEEEECSS
T ss_pred CCCC-cEEEE-c--CCcEEEEECCCCceEEEEechhhhhhcccc---------cceEECCCC----CEEEEEECCeeeEE
Confidence 3454 34443 3 78999999999886554443211 000000 001234432 245555554
Q ss_pred ----CcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCC--------
Q 016769 240 ----GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER-------- 307 (383)
Q Consensus 240 ----g~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~-------- 307 (383)
+.+.+||+.++. ...+..|...+....|+|+++.++.+ .|+.|.+|++....... +. .....
T Consensus 88 ~~~~~~~~~~d~~~~~--~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~-lt--~~g~~~~~~~g~~ 161 (740)
T 4a5s_A 88 HSYTASYDIYDLNKRQ--LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYR-IT--WTGKEDIIYNGIT 161 (740)
T ss_dssp SCEEEEEEEEETTTTE--ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEE-CC--SCCBTTTEEESBC
T ss_pred EccceEEEEEECCCCc--EEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEE-Ec--CCCCccceecCcc
Confidence 567799998743 33456677789999999999988776 57899999987543221 11 11111
Q ss_pred ---------CCeEEEEECCCCcEEEEEeCCC------------------------------------cEEEEEcCC---C
Q 016769 308 ---------PGISGTSIRPDSKIAATAGWDR------------------------------------RVRIYNYRK---G 339 (383)
Q Consensus 308 ---------~~i~~~~~~p~~~~l~s~~~dg------------------------------------~i~iwd~~~---~ 339 (383)
.....+.|||||++||.++.|. +|++||+.+ +
T Consensus 162 ~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~ 241 (740)
T 4a5s_A 162 DWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSV 241 (740)
T ss_dssp CHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSS
T ss_pred cccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCC
Confidence 1123588999999999886432 488899988 7
Q ss_pred c--eEEEec------ccccceeEEEEeCCCCEEEEEeC----CCcEEEEeCC
Q 016769 340 S--ALAILK------YHHATCNAVSFSSDCKLMASASE----DSTVALWELY 379 (383)
Q Consensus 340 ~--~~~~~~------~h~~~v~~v~~spd~~~las~s~----d~~i~~w~~~ 379 (383)
+ ....+. +|...+..++|||||+.++.... +..|.+||+.
T Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~ 293 (740)
T 4a5s_A 242 TNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYD 293 (740)
T ss_dssp SCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEE
T ss_pred CcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECC
Confidence 2 222333 37888999999999996665432 3478999874
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.20 E-value=7e-09 Score=93.60 Aligned_cols=184 Identities=8% Similarity=0.003 Sum_probs=112.8
Q ss_pred eccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEe-CCCcEEEEeCCCCCCc
Q 016769 175 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY-EDGSILVWDIRNPGIP 253 (383)
Q Consensus 175 ~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~-~dg~i~~wdl~~~~~~ 253 (383)
++...++.|.+||+.+++....+.-.... ........++ + . . ....++.. .++.|.++|+++.. .
T Consensus 99 v~~~~~~~v~~iD~~t~~~~~~i~~g~~~---~~~~~p~~i~--~-----~--~-~~lyv~~~~~~~~v~viD~~t~~-~ 164 (328)
T 3dsm_A 99 VTQIWDYRIFIINPKTYEITGYIECPDMD---MESGSTEQMV--Q-----Y--G-KYVYVNCWSYQNRILKIDTETDK-V 164 (328)
T ss_dssp EEEBSCSEEEEEETTTTEEEEEEECTTCC---TTTCBCCCEE--E-----E--T-TEEEEEECTTCCEEEEEETTTTE-E
T ss_pred EEECCCCeEEEEECCCCeEEEEEEcCCcc---ccCCCcceEE--E-----E--C-CEEEEEcCCCCCEEEEEECCCCe-E
Confidence 33334679999999998866555421100 0000111222 1 0 1 12234443 48899999998743 3
Q ss_pred eeeeeccccCeEEEEEeCCCCceEEEEcC----------CcEEEEEccCCCCeeEEeeeeecC-CCCeEEEEECCCCcEE
Q 016769 254 LTAMKVHLEPVLCLSIDESCNGGISGGAD----------QKIVLYNLDHSTGSCVIKKEINLE-RPGISGTSIRPDSKIA 322 (383)
Q Consensus 254 ~~~~~~h~~~v~~~~~~~~~~~~~s~~~d----------~~i~~wdl~~~~~~~~~~~~~~~~-~~~i~~~~~~p~~~~l 322 (383)
...+.... ....+.+++++..++++..+ +.|.++|.+.. ... ..+... ......++|+|+++++
T Consensus 165 ~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~--~v~--~~~~~~~g~~p~~la~~~d~~~l 239 (328)
T 3dsm_A 165 VDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF--TVE--KQFKFKLGDWPSEVQLNGTRDTL 239 (328)
T ss_dssp EEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT--EEE--EEEECCTTCCCEEEEECTTSCEE
T ss_pred EEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC--eEE--EEEecCCCCCceeEEEecCCCEE
Confidence 44444322 33567888887755554443 67999987643 222 222221 2368899999999988
Q ss_pred EEEeCCCcEEEEEcCCCceEE--EecccccceeEEEEeC-CCCEEEEE----eCCCcEEEEeCC
Q 016769 323 ATAGWDRRVRIYNYRKGSALA--ILKYHHATCNAVSFSS-DCKLMASA----SEDSTVALWELY 379 (383)
Q Consensus 323 ~s~~~dg~i~iwd~~~~~~~~--~~~~h~~~v~~v~~sp-d~~~las~----s~d~~i~~w~~~ 379 (383)
..+.. +|.+||..+++... .+..+......++++| +++++++. ..++.|.+||..
T Consensus 240 yv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 240 YWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 77654 89999998877532 1222245688999999 56677777 788999999874
No 181
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.18 E-value=4.4e-08 Score=89.39 Aligned_cols=282 Identities=13% Similarity=0.086 Sum_probs=164.8
Q ss_pred eEEEeCCCCeEEEecC-----CCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecc----------cCCe
Q 016769 23 DVCFHQTKPILFAGTT-----GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGT 87 (383)
Q Consensus 23 ~v~f~~~~~~L~sgs~-----D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------~D~t 87 (383)
.....|+++.|+.... ++.|.+.|..+.+.+..+...... .+.++| ++++++.+. .+++
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P----~va~sp--DG~~lyVan~~~~r~~~G~~~~~ 110 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP----NPVVAD--DGSFIAHASTVFSRIARGERTDY 110 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC----EEEECT--TSSCEEEEEEEEEETTEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC----cEEECC--CCCEEEEEcccccccccCCCCCE
Confidence 3566899998887755 679999999887776655433222 267777 456665443 4688
Q ss_pred EEEeecCCCCCCCCCeeeeecCceeeeeEEeecc-ccccccccCCCCccceeccCcccccCccccccccCCccceecccC
Q 016769 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKE-PYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVP 166 (383)
Q Consensus 88 i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (383)
|.+||..+.+... .+ . +.. ... . . +.......++
T Consensus 111 VsviD~~t~~v~~----~I----------~-v~~g~r~---~-----------~----------------g~~P~~~a~s 145 (386)
T 3sjl_D 111 VEVFDPVTLLPTA----DI----------E-LPDAPRF---L-----------V----------------GTYPWMTSLT 145 (386)
T ss_dssp EEEECTTTCCEEE----EE----------E-ETTCCCC---C-----------B----------------SCCGGGEEEC
T ss_pred EEEEECCCCeEEE----EE----------E-CCCcccc---c-----------c----------------CCCCceEEEc
Confidence 9999998764211 11 0 000 000 0 0 0000012345
Q ss_pred CCCCceeeeccC-CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEE
Q 016769 167 AEGPKYMAVAGE-QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 245 (383)
Q Consensus 167 ~~~~~~~~~~g~-~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~w 245 (383)
++|+. +.++.. .++.|.++|+.+.+.+.++.-. + |..+. |. +...+++.+.||++.+.
T Consensus 146 pDGk~-lyVan~~~~~~VsVID~~t~~vv~tI~v~-----------g---~~~~~---P~---g~~~~~~~~~DG~~~~v 204 (386)
T 3sjl_D 146 PDGKT-LLFYQFSPAPAVGVVDLEGKAFKRMLDVP-----------D---CYHIF---PT---APDTFFMHCRDGSLAKV 204 (386)
T ss_dssp TTSSE-EEEEECSSSCEEEEEETTTTEEEEEEECC-----------S---EEEEE---EE---ETTEEEEEETTSCEEEE
T ss_pred CCCCE-EEEEEcCCCCeEEEEECCCCcEEEEEECC-----------C---cceee---cC---CCceeEEECCCCCEEEE
Confidence 66654 444433 3578999999999987777421 1 11111 11 11235577789999999
Q ss_pred eCCCCCCceeeeeccc----cCeE-EEEEe-CCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee----------cCCCC
Q 016769 246 DIRNPGIPLTAMKVHL----EPVL-CLSID-ESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN----------LERPG 309 (383)
Q Consensus 246 dl~~~~~~~~~~~~h~----~~v~-~~~~~-~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~----------~~~~~ 309 (383)
++...+........+. .++. ...|+ +++ .++-.+.++++.+.|+....... ..... ....+
T Consensus 205 ~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG-~~~~vs~~g~V~v~d~~~~~~~v--~~~~~~~~~~~~~~g~~p~g 281 (386)
T 3sjl_D 205 AFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG-RLVWPTYTGKIHQIDLSSGDAKF--LPAVEALTEAERADGWRPGG 281 (386)
T ss_dssp ECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT-EEEEEBTTSEEEEEECTTSSCEE--CCCEESSCHHHHHTTEEECS
T ss_pred ECCCCCeEEEeecceeccccccccccceeEcCCC-cEEEEeCCCEEEEEECCCCccee--ecceeccccccccccccCCC
Confidence 9876333222111111 2221 13444 344 34445668899999986543221 11111 01123
Q ss_pred eEEEEECCCCcEEEEEeC----------CCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEE-eCCCcEEEEe
Q 016769 310 ISGTSIRPDSKIAATAGW----------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASA-SEDSTVALWE 377 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~-s~d~~i~~w~ 377 (383)
...++++|+++.+...-. .++|.++|+.+++.+..+.- ...++.++|+||++ +|.++ ..++.|.++|
T Consensus 282 ~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD 360 (386)
T 3sjl_D 282 WQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHD 360 (386)
T ss_dssp SSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEE
T ss_pred cceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 345788898876665532 25799999999999887753 23688999999997 55554 5589999999
Q ss_pred CCC
Q 016769 378 LYP 380 (383)
Q Consensus 378 ~~~ 380 (383)
...
T Consensus 361 ~~t 363 (386)
T 3sjl_D 361 AES 363 (386)
T ss_dssp TTT
T ss_pred CCC
Confidence 853
No 182
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.18 E-value=1.7e-09 Score=107.07 Aligned_cols=295 Identities=11% Similarity=0.022 Sum_probs=151.8
Q ss_pred eeeeeecCCcee---------eEEEe--CCCCe-EEEecC-CCeEEEeeCc--c-ccccccccccc---ccceeeeeeec
Q 016769 11 VAVLRGHRASVT---------DVCFH--QTKPI-LFAGTT-GGELRIWDTV--Q-HRTVSSSWVHS---AAHGIVSVATG 71 (383)
Q Consensus 11 ~~~l~gH~~~V~---------~v~f~--~~~~~-L~sgs~-D~~v~vW~~~--~-~~~~~~~~~~~---~~~~~~~~~~~ 71 (383)
...|.+|...|. ..+++ |||++ |+.++. +..|.+|+.. + +. ...+.... ....+..++++
T Consensus 60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~s 138 (662)
T 3azo_A 60 EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLL 138 (662)
T ss_dssp EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEE
T ss_pred cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEEC
Confidence 456667777766 66665 99988 665543 5566666664 2 22 22222211 12345678888
Q ss_pred CCCCcceeEecccC----------CeEEEeecCC------CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCcc
Q 016769 72 PSIGLNKVISQGRD----------GTVKCWDIEN------GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDC 135 (383)
Q Consensus 72 ~~~~~~~l~s~~~D----------~ti~~Wd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (383)
| +++.|+.++.| .+|.+||+++ +... .+.. ...
T Consensus 139 p--Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~l~~-----------~~~------------- 187 (662)
T 3azo_A 139 P--ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-----ELSD-----------DAH------------- 187 (662)
T ss_dssp T--TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-----ESSC-----------SCS-------------
T ss_pred C--CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-----EEEe-----------cCC-------------
Confidence 8 46788877766 5899999876 3210 0000 000
Q ss_pred ceeccCcccccCccccccccCCccceecccCCCCCceeeeccCC------cceEEEEecC-CCC--eeeEeccCcCCCCC
Q 016769 136 YEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQ------LSEVEIWDLN-TAE--RCTRLHQNSCGGSP 206 (383)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------~~~i~~Wdl~-~~~--~~~~~~~~~~~~s~ 206 (383)
.......++++|+.++.++... ...|++||++ ++. ....+....
T Consensus 188 ----------------------~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~----- 240 (662)
T 3azo_A 188 ----------------------RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP----- 240 (662)
T ss_dssp ----------------------SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET-----
T ss_pred ----------------------CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC-----
Confidence 0000112446665433333221 2479999998 562 222332110
Q ss_pred CcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC--cEEEEeCCCCCCceeeeeccccC--------eEEEEEeCCCCce
Q 016769 207 NFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG--SILVWDIRNPGIPLTAMKVHLEP--------VLCLSIDESCNGG 276 (383)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg--~i~~wdl~~~~~~~~~~~~h~~~--------v~~~~~~~~~~~~ 276 (383)
... ... ..+.|+ +. .++++..++ .|.+||+.++ ........+... +..+.+.+++..+
T Consensus 241 ----~~~--~~~-~~~spd---g~-l~~~~~~~~~~~l~~~~~~~~-~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~ 308 (662)
T 3azo_A 241 ----EEA--IAQ-AEWAPD---GS-LIVATDRTGWWNLHRVDPATG-AATQLCRREEEFAGPLWTPGMRWFAPLANGLIA 308 (662)
T ss_dssp ----TBC--EEE-EEECTT---SC-EEEEECTTSSCEEEEECTTTC-CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEE
T ss_pred ----Cce--Ecc-eEECCC---Ce-EEEEECCCCCeEEEEEECCCC-ceeecccccccccCccccccCceEeEeCCCEEE
Confidence 000 011 124443 22 456677778 5666665443 222222222222 4567888877777
Q ss_pred EEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEE-EECCCCcEEEEEeCCCcEEEE--EcCCCceEEEeccccccee
Q 016769 277 ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIY--NYRKGSALAILKYHHATCN 353 (383)
Q Consensus 277 ~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~-~~~p~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~~h~~~v~ 353 (383)
++++. +.++||.++..++.. ..+..+...+..+ +++++.-++++++.+....+| |+.+++.......|...+.
T Consensus 309 ~~~~~-~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~ 384 (662)
T 3azo_A 309 VVHGK-GAAVLGILDPESGEL---VDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVD 384 (662)
T ss_dssp EEEBS-SSCEEEEEETTTTEE---EECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSC
T ss_pred EEEEc-CccEEEEEECCCCcE---EEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCC
Confidence 88887 999999665443332 2233344456666 555444455666666554554 6666665443344543333
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 354 AVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 354 ~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
...+++.....+.+..+..|..|-+.|
T Consensus 385 ~~~~~~~~~~~~~~~dg~~i~~~~~~P 411 (662)
T 3azo_A 385 PAYYPEPQIRTFTAPDGREIHAHIYPP 411 (662)
T ss_dssp GGGSCCCEEEEEECTTSCEEEEEEECC
T ss_pred ccccCcceEEEEEcCCCCEEEEEEECC
Confidence 333443333444444444666665543
No 183
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.14 E-value=9.4e-08 Score=85.03 Aligned_cols=117 Identities=11% Similarity=0.133 Sum_probs=83.8
Q ss_pred cCeEEEEEe----CCCCceEEE-EcCCcEEEEEccCCCCeeEE---eeeeecCC-CCeEEEEECCCCcEEEEEeCCCcEE
Q 016769 262 EPVLCLSID----ESCNGGISG-GADQKIVLYNLDHSTGSCVI---KKEINLER-PGISGTSIRPDSKIAATAGWDRRVR 332 (383)
Q Consensus 262 ~~v~~~~~~----~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~---~~~~~~~~-~~i~~~~~~p~~~~l~s~~~dg~i~ 332 (383)
.....+.++ +++..++.+ ..++.|.+||++. ++.... ........ .....++++++|++.++...++.|.
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~-~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKG-PAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEE-TTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCC-CCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 345677788 877655554 4578899999862 122111 11111111 4578899999999888887899999
Q ss_pred EEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 333 IYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 333 iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
+||..+++.+..+..+...+.+++|+||++ ++++...++.|..|++.
T Consensus 251 ~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 251 VFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 999987777666666667899999999999 55666677899999875
No 184
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.14 E-value=1e-08 Score=94.28 Aligned_cols=190 Identities=14% Similarity=0.078 Sum_probs=112.6
Q ss_pred cCCCCCceeeeccCCcc--eEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcE
Q 016769 165 VPAEGPKYMAVAGEQLS--EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 242 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~--~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i 242 (383)
++++|+.++. +...++ .|.+||+.+++.......... ..... .+.|+. ..++.++.++.|
T Consensus 43 ~SpDg~~l~~-~~~~~g~~~l~~~d~~~g~~~~lt~~~~~----------~~~~~---~~spdg----~~l~~~~~~~~l 104 (388)
T 3pe7_A 43 FTRDGSKLLF-GGAFDGPWNYYLLDLNTQVATQLTEGRGD----------NTFGG---FLSPDD----DALFYVKDGRNL 104 (388)
T ss_dssp BCTTSCEEEE-EECTTSSCEEEEEETTTCEEEECCCSSCB----------CSSSC---EECTTS----SEEEEEETTTEE
T ss_pred CCCCCCEEEE-EEcCCCCceEEEEeCCCCceEEeeeCCCC----------Cccce---EEcCCC----CEEEEEeCCCeE
Confidence 5567764444 434344 588889888775433221110 00000 244432 257777888999
Q ss_pred EEEeCCCCCCceeeeeccccCeEEE--EEeCCCCceEEE----------------------EcCCcEEEEEccCCCCeeE
Q 016769 243 LVWDIRNPGIPLTAMKVHLEPVLCL--SIDESCNGGISG----------------------GADQKIVLYNLDHSTGSCV 298 (383)
Q Consensus 243 ~~wdl~~~~~~~~~~~~h~~~v~~~--~~~~~~~~~~s~----------------------~~d~~i~~wdl~~~~~~~~ 298 (383)
.+||+.+.. .......+...+... .+++++..++.. +.+..|.+||+.......
T Consensus 105 ~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~- 182 (388)
T 3pe7_A 105 MRVDLATLE-ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV- 182 (388)
T ss_dssp EEEETTTCC-EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-
T ss_pred EEEECCCCc-ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-
Confidence 999998743 233344444333333 336776655422 234668888887543211
Q ss_pred EeeeeecCCCCeEEEEECC-CCcEEEEEeCC------CcEEEEEcCCCceEEEecccc--cceeEEEEeCCCCEEEEEeC
Q 016769 299 IKKEINLERPGISGTSIRP-DSKIAATAGWD------RRVRIYNYRKGSALAILKYHH--ATCNAVSFSSDCKLMASASE 369 (383)
Q Consensus 299 ~~~~~~~~~~~i~~~~~~p-~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~h~--~~v~~v~~spd~~~las~s~ 369 (383)
+......+..++|+| |++.|+....+ ..|.++|+..++.. .+..+. ..+...+|||||+.|+..+.
T Consensus 183 ----l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 183 ----ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp ----EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred ----eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECCCCCEEEEEec
Confidence 112334578999999 99988877753 37888887655443 343344 35788899999997766544
Q ss_pred C-C----cEEEEeCC
Q 016769 370 D-S----TVALWELY 379 (383)
Q Consensus 370 d-~----~i~~w~~~ 379 (383)
+ + .|.+||+.
T Consensus 258 ~~~~~~~~l~~~d~~ 272 (388)
T 3pe7_A 258 LKGSPDRFIYSADPE 272 (388)
T ss_dssp ETTCCCEEEEEECTT
T ss_pred CCCCCcceEEEEecC
Confidence 2 2 39999985
No 185
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.12 E-value=5.7e-09 Score=94.17 Aligned_cols=180 Identities=14% Similarity=0.136 Sum_probs=116.1
Q ss_pred ceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeee---
Q 016769 181 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM--- 257 (383)
Q Consensus 181 ~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~--- 257 (383)
+.|.+||..+++.+....... +. ...+ ++ +.+ .+. .+++...++.|++||.......+..+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~------~~-~p~g--ia---~d~---~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~ 132 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNL------FY-LPHG--LS---IDT---DGN-YWVTDVALHQVFKLDPHSKEGPLLILGRS 132 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTT------CS-SEEE--EE---ECT---TSC-EEEEETTTTEEEEECTTCSSCCSEEESBT
T ss_pred CcEEEEECCCCeEEeccCCCc------cC-CceE--EE---ECC---CCC-EEEEECCCCEEEEEeCCCCeEEEEEeccc
Confidence 479999998888654443110 00 0011 11 222 222 46677888999999976432133333
Q ss_pred ------eccccCeEEEEEeC-CCCceEEEE-cCCcEEEEEccCCCCeeEEeeeeec--------CCCCeEEEEECCC-Cc
Q 016769 258 ------KVHLEPVLCLSIDE-SCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEINL--------ERPGISGTSIRPD-SK 320 (383)
Q Consensus 258 ------~~h~~~v~~~~~~~-~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~~~--------~~~~i~~~~~~p~-~~ 320 (383)
..+......+++++ .+..+++.+ .++.|++||.+ +.......... ......+++++|+ ++
T Consensus 133 ~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~---g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~ 209 (329)
T 3fvz_A 133 MQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS---GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQ 209 (329)
T ss_dssp TBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT---SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTE
T ss_pred CCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC---CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCE
Confidence 23445678999999 666556665 58999999843 22222111111 1123789999998 78
Q ss_pred EEEEEeCCCcEEEEEcCCCceEEEec--ccccceeEEEEeC------CCCEEEEEeCCCcEEEEeCC
Q 016769 321 IAATAGWDRRVRIYNYRKGSALAILK--YHHATCNAVSFSS------DCKLMASASEDSTVALWELY 379 (383)
Q Consensus 321 ~l~s~~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~v~~sp------d~~~las~s~d~~i~~w~~~ 379 (383)
++++...+++|++||..+++.+..+. .+...+.+++|+| +|+.+++.+.+..|++||+.
T Consensus 210 l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~ 276 (329)
T 3fvz_A 210 LCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFS 276 (329)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETT
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcC
Confidence 88888889999999999898888774 4566788999999 44444444555689999864
No 186
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.12 E-value=5.3e-07 Score=82.71 Aligned_cols=281 Identities=9% Similarity=-0.019 Sum_probs=157.0
Q ss_pred EEeCCCCeEEEecC--CC---eEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecc----------cCCeEE
Q 016769 25 CFHQTKPILFAGTT--GG---ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVK 89 (383)
Q Consensus 25 ~f~~~~~~L~sgs~--D~---~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------~D~ti~ 89 (383)
...|++++++.... .. +|.++|..+++.+..+.... .- .+.++| +++.++.+. .+++|.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~---~p-~i~~sp--Dg~~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF---LP-NPVAAH--SGSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCC---CC-CeEECC--CCCEEEEEeccccccccCCCCCeEE
Confidence 44578887777654 22 88999998877654433211 12 667777 456665443 478899
Q ss_pred EeecCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCC
Q 016769 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEG 169 (383)
Q Consensus 90 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (383)
++|..+.+... .+... ..... . .+ . ......++++|
T Consensus 101 viD~~t~~~~~----~i~~~----------~~~~~---~-----------~g------------~----~p~~~~~spDG 136 (373)
T 2mad_H 101 VFDPVTFLPIA----DIELP----------DAPRF---D-----------VG------------P----YSWMNANTPNN 136 (373)
T ss_pred EEECCCCcEEE----EEECC----------Ccccc---c-----------cC------------C----CccceEECCCC
Confidence 99987653211 11000 00000 0 00 0 00011244666
Q ss_pred CceeeeccC-CcceEEEEecCCCCeeeE-eccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeC
Q 016769 170 PKYMAVAGE-QLSEVEIWDLNTAERCTR-LHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 247 (383)
Q Consensus 170 ~~~~~~~g~-~~~~i~~Wdl~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl 247 (383)
+ ++.++.. ..+.|.++| ++++.+.. +.-. -|.. +.+.. ...+++.+.||++.++|.
T Consensus 137 ~-~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~--------------~~~~---~~~~~---~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 137 A-DLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP--------------TCYH---IHPGA---PSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred C-EEEEEecCCCCeEEEEE-CCCCEEeEEcCCC--------------ceEE---EEeCC---CceEEEEcCCCCEEEEEC
Confidence 5 4444443 257899999 99887665 4311 0111 11221 113456677999999998
Q ss_pred CCCCCceeeee-----ccccCe-EEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee--------cCCCCeEEE
Q 016769 248 RNPGIPLTAMK-----VHLEPV-LCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN--------LERPGISGT 313 (383)
Q Consensus 248 ~~~~~~~~~~~-----~h~~~v-~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~--------~~~~~i~~~ 313 (383)
+... ..... ....++ ....+.+.+..++..+..+.+.+.|+.............. ....+...+
T Consensus 195 -~g~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~ 272 (373)
T 2mad_H 195 -AGGA-AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQV 272 (373)
T ss_pred -CCcE-EEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeE
Confidence 5432 21111 111222 1223344444444444677888888764322111110000 011223447
Q ss_pred EECCCCcEEEEEeC----------CCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEe-CCCcEEEEeCCC
Q 016769 314 SIRPDSKIAATAGW----------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASAS-EDSTVALWELYP 380 (383)
Q Consensus 314 ~~~p~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s-~d~~i~~w~~~~ 380 (383)
.++|+++.+..+.. ++.|.++|+.+++.+.++. -......++|+|||+ .+.++. .++.|.+||+..
T Consensus 273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 89999887666543 3589999999999888875 333578999999999 777777 589999999853
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.11 E-value=2.1e-08 Score=88.29 Aligned_cols=134 Identities=10% Similarity=0.172 Sum_probs=96.9
Q ss_pred CCcEEEEeCCCCCCceeeee-ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC
Q 016769 239 DGSILVWDIRNPGIPLTAMK-VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p 317 (383)
++.|.+||. + +..+..+. .+...+..+.+++++..+++...++.|.+||.+. ..............+.+++++|
T Consensus 99 ~~~i~~~d~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~~~~~~p~~i~~~~ 173 (286)
T 1q7f_A 99 THQIQIYNQ-Y-GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG---NVLHKFGCSKHLEFPNGVVVND 173 (286)
T ss_dssp GCEEEEECT-T-SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS---CEEEEEECTTTCSSEEEEEECS
T ss_pred CCEEEEECC-C-CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC---CEEEEeCCCCccCCcEEEEECC
Confidence 889999994 3 23333332 2345678999999887656666788999998642 2221111112234688999999
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCceEEEeccc--ccceeEEEEeCCCCEEEEEeCCC-cEEEEeC
Q 016769 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYH--HATCNAVSFSSDCKLMASASEDS-TVALWEL 378 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h--~~~v~~v~~spd~~~las~s~d~-~i~~w~~ 378 (383)
+++++++...++.|++||. .++.+..+..+ ...+..++++|+|+++++...++ .|++||.
T Consensus 174 ~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 174 KQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp SSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred CCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 9998888888999999998 45666666433 36789999999999999988886 9999985
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.11 E-value=3e-07 Score=88.92 Aligned_cols=295 Identities=13% Similarity=0.066 Sum_probs=161.1
Q ss_pred ceeeEEEeCCCCeEEEecCCCeEEEeeCc--ccccccccccccccceeeeeeec----CCCCcceeEe-cccCCeEEEee
Q 016769 20 SVTDVCFHQTKPILFAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATG----PSIGLNKVIS-QGRDGTVKCWD 92 (383)
Q Consensus 20 ~V~~v~f~~~~~~L~sgs~D~~v~vW~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~s-~~~D~ti~~Wd 92 (383)
.+..+.|+|||++|++++.|+.|.+||+. +.+.+..+... ..-..++++ | ++++++. ...++++.++|
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G---~~P~~ia~s~~~~p--DGk~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG---SEARSIETSKMEGW--EDKYAIAGAYWPPQYVIMD 272 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC---SEEEEEEECCSTTC--TTTEEEEEEEETTEEEEEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC---CCCceeEEccccCC--CCCEEEEEEccCCeEEEEE
Confidence 45578999999999999999999999985 55544443322 223466777 4 3566654 55779999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
..+.+. ...+..... ..........+ +...+ ..++.++.+
T Consensus 273 ~~t~~~----~~~i~~~~~----------~~~~~~~~p~~------------------------rva~i--~~s~~~~~~ 312 (567)
T 1qks_A 273 GETLEP----KKIQSTRGM----------TYDEQEYHPEP------------------------RVAAI--LASHYRPEF 312 (567)
T ss_dssp TTTCCE----EEEEECCEE----------CTTTCCEESCC------------------------CEEEE--EECSSSSEE
T ss_pred CCCCcE----EEEEecccc----------ccccccccCCC------------------------ceEEE--EEcCCCCEE
Confidence 876532 111111000 00000000000 00000 011223333
Q ss_pred eeeccCCcceEEEEecCCCCee--eEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 250 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~ 250 (383)
++. -...+.|.++|..+.+.+ ..+... .+ .... .|.++ +...++++..+++|.++|+.+.
T Consensus 313 vv~-~~~~g~v~~vd~~~~~~~~v~~i~~~------~~-----~~d~---~~~pd---gr~~~va~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 313 IVN-VKETGKILLVDYTDLNNLKTTEISAE------RF-----LHDG---GLDGS---HRYFITAANARNKLVVIDTKEG 374 (567)
T ss_dssp EEE-ETTTTEEEEEETTCSSEEEEEEEECC------SS-----EEEE---EECTT---SCEEEEEEGGGTEEEEEETTTT
T ss_pred EEE-ecCCCeEEEEecCCCccceeeeeecc------cc-----ccCc---eECCC---CCEEEEEeCCCCeEEEEECCCC
Confidence 333 345678999998765422 222110 00 0001 13332 2334555667889999999874
Q ss_pred CCceeeeec-----cccCeEEEEEeCCCCce-EEEE-cCCcEEEEEccCCCCe---eEEeeeeecCCCCeEEEEECCCCc
Q 016769 251 GIPLTAMKV-----HLEPVLCLSIDESCNGG-ISGG-ADQKIVLYNLDHSTGS---CVIKKEINLERPGISGTSIRPDSK 320 (383)
Q Consensus 251 ~~~~~~~~~-----h~~~v~~~~~~~~~~~~-~s~~-~d~~i~~wdl~~~~~~---~~~~~~~~~~~~~i~~~~~~p~~~ 320 (383)
. ....+.. |-.....+ +++++..+ +++. .++.|.++|.+..... ......+.....+-.-+.++|+++
T Consensus 375 k-l~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~ 452 (567)
T 1qks_A 375 K-LVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQ 452 (567)
T ss_dssp E-EEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCS
T ss_pred c-EEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCC
Confidence 3 3333332 22112222 47764444 3443 4689999998752210 111223333223334467899999
Q ss_pred EEEEEeC-------CCcEEEEEcCCC-----c-eEEEec--------ccccceeEEEEeCCCCEEEEEe-----CCCcEE
Q 016769 321 IAATAGW-------DRRVRIYNYRKG-----S-ALAILK--------YHHATCNAVSFSSDCKLMASAS-----EDSTVA 374 (383)
Q Consensus 321 ~l~s~~~-------dg~i~iwd~~~~-----~-~~~~~~--------~h~~~v~~v~~spd~~~las~s-----~d~~i~ 374 (383)
++..... ..+|.+||+.+. . .+..+. .-...+..+.|+|||+.+-.+. .++.|.
T Consensus 453 ~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~ 532 (567)
T 1qks_A 453 YLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALV 532 (567)
T ss_dssp EEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEE
T ss_pred eEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEE
Confidence 9887663 359999999866 2 123331 1134688899999999654442 378999
Q ss_pred EEeCC
Q 016769 375 LWELY 379 (383)
Q Consensus 375 ~w~~~ 379 (383)
++|..
T Consensus 533 v~D~~ 537 (567)
T 1qks_A 533 VVDDK 537 (567)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 98863
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.10 E-value=2e-08 Score=90.39 Aligned_cols=113 Identities=12% Similarity=0.057 Sum_probs=70.6
Q ss_pred cCeEEEEEeCCCCceEEEEc----CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEE-EEEeCCCcEEEEEc
Q 016769 262 EPVLCLSIDESCNGGISGGA----DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA-ATAGWDRRVRIYNY 336 (383)
Q Consensus 262 ~~v~~~~~~~~~~~~~s~~~----d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l-~s~~~dg~i~iwd~ 336 (383)
..+..+.+++++...++... +....||.++..+....... .....+.+++|+|+++++ ++.+.++.|++||+
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~ 211 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII---QNISVANGIALSTDEKVLWVTETTANRLHRIAL 211 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE---EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee---cCCCcccceEECCCCCEEEEEeCCCCeEEEEEe
Confidence 35667777777754444332 12344554443332221111 112347889999999855 44556889999999
Q ss_pred CC-CceEEE--------ecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 337 RK-GSALAI--------LKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 337 ~~-~~~~~~--------~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.+ +..+.. +.++ ..+..++++++|+++++...++.|.+||.
T Consensus 212 ~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 212 EDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp CTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred cCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 64 333221 1222 36788999999999888888899999986
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.07 E-value=6.8e-08 Score=87.06 Aligned_cols=258 Identities=8% Similarity=-0.052 Sum_probs=145.1
Q ss_pred ceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCC
Q 016769 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLS 99 (383)
Q Consensus 20 ~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~ 99 (383)
....|++. ++++.++...++.|.+||..+++.+..+... .....+++++ ++..+++...+++|.+||.+++...
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~---~~p~~i~~~~--~g~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGF---TSPRYIHFLS--DEKAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECC---SSEEEEEEEE--TTEEEEEEBSCSEEEEEETTTTEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCC---CCCcEEEEeC--CCeEEEEECCCCeEEEEECCCCeEE
Confidence 45677775 3456666677899999999887766554221 2234555554 3444555558899999999876311
Q ss_pred CCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccC-
Q 016769 100 SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGE- 178 (383)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 178 (383)
. .+.. ..... ....+ ..+ .+ ++.+ +.++..
T Consensus 119 ~----~i~~-----------g~~~~---~~~~p--------------------------~~i--~~--~~~~-lyv~~~~ 149 (328)
T 3dsm_A 119 G----YIEC-----------PDMDM---ESGST--------------------------EQM--VQ--YGKY-VYVNCWS 149 (328)
T ss_dssp E----EEEC-----------TTCCT---TTCBC--------------------------CCE--EE--ETTE-EEEEECT
T ss_pred E----EEEc-----------CCccc---cCCCc--------------------------ceE--EE--ECCE-EEEEcCC
Confidence 0 0000 00000 00000 000 01 1223 333333
Q ss_pred CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCC----------CcEEEEeCC
Q 016769 179 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED----------GSILVWDIR 248 (383)
Q Consensus 179 ~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~d----------g~i~~wdl~ 248 (383)
.++.|.++|+++++.+.++.....+. .+. +.+ .+. ..+++..+ +.|.++|.+
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g~~p~---------~i~-----~~~---dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIGIQPT---------SLV-----MDK---YNK-MWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECSSCBC---------CCE-----ECT---TSE-EEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred CCCEEEEEECCCCeEEEEEEcCCCcc---------ceE-----EcC---CCC-EEEEECCCccCCccccCCceEEEEECC
Confidence 36799999999988766654321111 111 111 122 23343333 789999987
Q ss_pred CCCCceeeeecc-ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC-CCcEEEEE-
Q 016769 249 NPGIPLTAMKVH-LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP-DSKIAATA- 325 (383)
Q Consensus 249 ~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p-~~~~l~s~- 325 (383)
+.. ....+... ......+++++++..++.+.. .|.+||.+..... .............+++++| +++.+++.
T Consensus 212 t~~-v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~--~~~~~~~~~~~p~gi~vdp~~g~lyva~~ 286 (328)
T 3dsm_A 212 TFT-VEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP--VRPFLEFRDTKYYGLTVNPNNGEVYVADA 286 (328)
T ss_dssp TTE-EEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC--SSCSBCCCSSCEEEEEECTTTCCEEEEEC
T ss_pred CCe-EEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee--eeeeecCCCCceEEEEEcCCCCeEEEEcc
Confidence 643 23333322 235788999998887776644 8888988654321 0111111134688999999 55666665
Q ss_pred ---eCCCcEEEEEcCCCceEEEecccccceeEEEE
Q 016769 326 ---GWDRRVRIYNYRKGSALAILKYHHATCNAVSF 357 (383)
Q Consensus 326 ---~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~ 357 (383)
..+++|.+||.. ++.+..+.-- .....++|
T Consensus 287 ~~y~~~~~V~v~d~~-g~~~~~i~~G-~~P~~~~~ 319 (328)
T 3dsm_A 287 IDYQQQGIVYRYSPQ-GKLIDEFYVG-IIPGAFCW 319 (328)
T ss_dssp TTSSSEEEEEEECTT-CCEEEEEEEE-ESEEEEEE
T ss_pred cccccCCEEEEECCC-CCEEEEEEec-cCcceEEE
Confidence 578999999998 8888777532 23455555
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.06 E-value=1.4e-08 Score=101.92 Aligned_cols=135 Identities=15% Similarity=0.126 Sum_probs=78.3
Q ss_pred cEEEEeCCCCCCc-eeeeeccccCeEEEEEeCCCCceEEEEc----CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEE
Q 016769 241 SILVWDIRNPGIP-LTAMKVHLEPVLCLSIDESCNGGISGGA----DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSI 315 (383)
Q Consensus 241 ~i~~wdl~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~s~~~----d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~ 315 (383)
.|.+||+.++... ...+..+...+... +++++..++..+. ...|.+||++... .. ...........+.++++
T Consensus 295 ~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~-~~~l~~~~~~~l~~~~~ 371 (741)
T 1yr2_A 295 TVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PR-FDTVVPESKDNLESVGI 371 (741)
T ss_dssp EEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CE-EEEEECCCSSEEEEEEE
T ss_pred eEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cc-cEEEecCCCCeEEEEEE
Confidence 5666666543111 22333333333222 2345555555544 3448888886532 11 11112222234667777
Q ss_pred CCCCcEEEEEeCCCcEEEEEcC-CCceEEEecc-cccceeEEEEeCCCCEEEE----EeCCCcEEEEeCC
Q 016769 316 RPDSKIAATAGWDRRVRIYNYR-KGSALAILKY-HHATCNAVSFSSDCKLMAS----ASEDSTVALWELY 379 (383)
Q Consensus 316 ~p~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~-h~~~v~~v~~spd~~~las----~s~d~~i~~w~~~ 379 (383)
. ++.++++...|+..+||.++ +++....+.. +...+..++++||++.|+. ....+.|++||+.
T Consensus 372 ~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 372 A-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp E-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred E-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 7 66788888999988888665 4565666654 3667888999999986652 2334788999874
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.01 E-value=2.5e-07 Score=81.18 Aligned_cols=98 Identities=6% Similarity=-0.073 Sum_probs=73.7
Q ss_pred EEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEE
Q 016769 265 LCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAI 344 (383)
Q Consensus 265 ~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~ 344 (383)
..+.+.+++..+++...++.|..||.+ +..+.+... . ....++.+.++++++++++.+++|..||..+++.+..
T Consensus 128 ~~v~~~~~G~~lv~~~~~~~v~~~d~~---G~~~w~~~~--~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~ 201 (276)
T 3no2_A 128 RQINKNKKGNYLVPLFATSEVREIAPN---GQLLNSVKL--S-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRR 201 (276)
T ss_dssp SCCEECTTSCEEEEETTTTEEEEECTT---SCEEEEEEC--S-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEE
T ss_pred cCceECCCCCEEEEecCCCEEEEECCC---CCEEEEEEC--C-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEE
Confidence 344567778888888889999999875 333333222 1 3456678889999999988888999999999999988
Q ss_pred ecccc------cceeEEEEeCCCCEEEEEe
Q 016769 345 LKYHH------ATCNAVSFSSDCKLMASAS 368 (383)
Q Consensus 345 ~~~h~------~~v~~v~~spd~~~las~s 368 (383)
+..+. ..+..++..++|.++++..
T Consensus 202 ~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 202 VNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred ecCCCCCCccccccccceEcCCCCEEEEec
Confidence 86432 2378888899999888874
No 193
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.00 E-value=7.7e-07 Score=82.69 Aligned_cols=110 Identities=7% Similarity=-0.014 Sum_probs=77.5
Q ss_pred EEEEeCCCCce-EEEEcCCcEEEEEccCCCCeeEEeeee-e----------cCCCCeEEEEECCCCcEEEEEe-CCCcEE
Q 016769 266 CLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEI-N----------LERPGISGTSIRPDSKIAATAG-WDRRVR 332 (383)
Q Consensus 266 ~~~~~~~~~~~-~s~~~d~~i~~wdl~~~~~~~~~~~~~-~----------~~~~~i~~~~~~p~~~~l~s~~-~dg~i~ 332 (383)
.++++++...+ ++-...+.|..|+.+.. ...+.... . ..-....+++++|+++++++-+ .+++|+
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~ 348 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLR 348 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEE
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEE
Confidence 88999864444 44455778999987532 11110000 0 0013478999999999888877 899999
Q ss_pred EEEcCCCceEEEeccc---------------ccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 333 IYNYRKGSALAILKYH---------------HATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 333 iwd~~~~~~~~~~~~h---------------~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.||+.+++. .++.++ -.....++++|+|.++++-..++.|+.+++
T Consensus 349 ~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 349 KLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999877764 444444 246889999999999999999999988875
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.00 E-value=4.9e-08 Score=85.75 Aligned_cols=182 Identities=13% Similarity=0.050 Sum_probs=122.4
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
++++++.++.|.+||.++++.+.++..+.. ...... .+.|+ +. ++. +.++.|..||. ++ .
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~---------~~~~~~---~~~pd---G~--ilv-s~~~~V~~~d~-~G-~ 66 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKG---------WECNSV---AATKA---GE--ILF-SYSKGAKMITR-DG-R 66 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTT---------CCCCEE---EECTT---SC--EEE-ECBSEEEEECT-TS-C
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCcc---------CCCcCe---EECCC---CC--EEE-eCCCCEEEECC-CC-C
Confidence 456677789999999999998877753210 001111 13332 22 333 45788999997 43 3
Q ss_pred ceeeeecc-ccCeEEEEEeCCCCceEEEEc-CCcEEEEEccCCCCeeEEeeeeecC----CCCeEEEEECCCCcEEEEEe
Q 016769 253 PLTAMKVH-LEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINLE----RPGISGTSIRPDSKIAATAG 326 (383)
Q Consensus 253 ~~~~~~~h-~~~v~~~~~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~~~~~~~~----~~~i~~~~~~p~~~~l~s~~ 326 (383)
.+-.++.+ ...+.++.+.+++..+++.+. ++++..+|. ++..+........ ......+++.++|+++++..
T Consensus 67 ~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~---~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~ 143 (276)
T 3no2_A 67 ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM---KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF 143 (276)
T ss_dssp EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT---TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET
T ss_pred EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC---CCCEEEEEeccCCCCcccccccCceECCCCCEEEEec
Confidence 34444443 235677888899988887776 565655553 3443333222111 11244567889999999999
Q ss_pred CCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 327 WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+++|..||.. ++.+..+... ..+.++.+.|+|+++++++.++.|..+|..
T Consensus 144 ~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 144 ATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp TTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred CCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 99999999998 9999888754 356678889999999999999888888764
No 195
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.00 E-value=8.1e-07 Score=78.13 Aligned_cols=281 Identities=8% Similarity=0.004 Sum_probs=154.9
Q ss_pred ecCCceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCC
Q 016769 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (383)
Q Consensus 16 gH~~~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~ 95 (383)
.....+.+|++.++|++.++...++.|.+||.. ++.. .............+++.+ ++..+++...++.|..+|..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPDAKVMCLIVSS--LGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECCCCCCcceeEEECC--CCCEEEEecCCCeEEEECCC-
Confidence 445688999999999988888788999999976 3322 111111112345566665 35666666667889999876
Q ss_pred CCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeee
Q 016769 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAV 175 (383)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (383)
+... .. .. +.. .... .. ..+.+++. ++ +
T Consensus 92 g~~~-----~~----------~~---~~~-------~~~~-----------------------~~--i~~~~~g~-l~-v 119 (300)
T 2qc5_A 92 GGFT-----EY----------PL---PQP-------DSGP-----------------------YG--ITEGLNGD-IW-F 119 (300)
T ss_dssp SCEE-----EE----------EC---SST-------TCCE-----------------------EE--EEECSTTC-EE-E
T ss_pred CCeE-----Ee----------cC---CCC-------CCCC-----------------------cc--ceECCCCC-EE-E
Confidence 4210 00 00 000 0000 00 01122333 22 3
Q ss_pred ccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCcee
Q 016769 176 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 255 (383)
Q Consensus 176 ~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~ 255 (383)
+....+.|..+|.. ++.. .+.... .......+. +.+ .+. ..++...++.|..+|. +......
T Consensus 120 ~~~~~~~i~~~~~~-g~~~-~~~~~~--------~~~~~~~i~---~d~---~g~-l~v~~~~~~~i~~~~~-~g~~~~~ 181 (300)
T 2qc5_A 120 TQLNGDRIGKLTAD-GTIY-EYDLPN--------KGSYPAFIT---LGS---DNA-LWFTENQNNSIGRITN-TGKLEEY 181 (300)
T ss_dssp EETTTTEEEEECTT-SCEE-EEECSS--------TTCCEEEEE---ECT---TSS-EEEEETTTTEEEEECT-TCCEEEE
T ss_pred EccCCCeEEEECCC-CCEE-EccCCC--------CCCCceeEE---ECC---CCC-EEEEecCCCeEEEECC-CCcEEEe
Confidence 33334678888876 4432 221100 000111111 111 222 3444555788999987 3222111
Q ss_pred eeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEE
Q 016769 256 AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 335 (383)
Q Consensus 256 ~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd 335 (383)
....+...+..+.+++++...++....+.|.+||.+ +.... .........+.++++.++++..++...++.|..||
T Consensus 182 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~---g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 182 PLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT---GEISE-YDIPTPNARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT---CCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred eCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC---CcEEE-EECCCCCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 122234467889999887544444446679999872 22211 11222335688999999999777766779999999
Q ss_pred cCCCceE-EEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 336 YRKGSAL-AILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 336 ~~~~~~~-~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
. +++.. ..+......+.++++.|+|++.++.. + .|..+|.
T Consensus 258 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 258 N-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp T-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred C-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 8 45433 22333455688999999999777665 4 5555553
No 196
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.95 E-value=1.5e-08 Score=93.23 Aligned_cols=192 Identities=10% Similarity=0.020 Sum_probs=107.8
Q ss_pred cCCCCCceeeeccC-CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEE
Q 016769 165 VPAEGPKYMAVAGE-QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 243 (383)
Q Consensus 165 ~~~~~~~~~~~~g~-~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~ 243 (383)
++++|+.++.+... .+..|.+||+.+++.. .+...... .... ..+.|+. ..++..+.++.|.
T Consensus 43 ~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~-~l~~~~~~---------~~~~---~~~spdg----~~l~~~~~~~~l~ 105 (396)
T 3c5m_A 43 FTQDGKKLLFAGDFDGNRNYYLLNLETQQAV-QLTEGKGD---------NTFG---GFISTDE----RAFFYVKNELNLM 105 (396)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTTTEEE-ECCCSSCB---------CTTT---CEECTTS----SEEEEEETTTEEE
T ss_pred CCCCCCEEEEEEecCCCceEEEEECCCCcEE-EeecCCCC---------cccc---ceECCCC----CEEEEEEcCCcEE
Confidence 45666644433322 2346888899887642 22211000 0000 0133332 2466777788999
Q ss_pred EEeCCCCCCceeeeeccccCeEE-------------------EEEeCCCCceEEE-----EcCCcEEEEEccCCCCeeEE
Q 016769 244 VWDIRNPGIPLTAMKVHLEPVLC-------------------LSIDESCNGGISG-----GADQKIVLYNLDHSTGSCVI 299 (383)
Q Consensus 244 ~wdl~~~~~~~~~~~~h~~~v~~-------------------~~~~~~~~~~~s~-----~~d~~i~~wdl~~~~~~~~~ 299 (383)
+||+.... .......+...... ..+++++..++.. ..+..|.+||++........
T Consensus 106 ~~d~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~ 184 (396)
T 3c5m_A 106 KVDLETLE-EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH 184 (396)
T ss_dssp EEETTTCC-EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE
T ss_pred EEECCCCC-cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec
Confidence 99987643 22223323221111 1234445443322 34567888998754322111
Q ss_pred eeeeecCCCCeEEEEECC-CCcEEEEEeCC------CcEEEEEcCCCceEEEeccc-ccceeEEEEeCCCCEEEEEeCC-
Q 016769 300 KKEINLERPGISGTSIRP-DSKIAATAGWD------RRVRIYNYRKGSALAILKYH-HATCNAVSFSSDCKLMASASED- 370 (383)
Q Consensus 300 ~~~~~~~~~~i~~~~~~p-~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~h-~~~v~~v~~spd~~~las~s~d- 370 (383)
.....+..+.|+| +++.|+..+.+ ..|.+||+..++........ ...+..++|+|||++|+.++.+
T Consensus 185 -----~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (396)
T 3c5m_A 185 -----QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFK 259 (396)
T ss_dssp -----EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred -----cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCC
Confidence 2334678899999 78877666543 36888898765543322211 2357889999999988877655
Q ss_pred ----CcEEEEeCC
Q 016769 371 ----STVALWELY 379 (383)
Q Consensus 371 ----~~i~~w~~~ 379 (383)
+.|++||+.
T Consensus 260 ~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 260 GQTDRVIYKANPE 272 (396)
T ss_dssp TTCCEEEEEECTT
T ss_pred CCccceEEEEECC
Confidence 459999985
No 197
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.92 E-value=2.5e-08 Score=88.30 Aligned_cols=143 Identities=10% Similarity=0.041 Sum_probs=99.1
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.++++..++.|..||.... ...+..+...+..+.+++++..+++...++.|.+||....................++
T Consensus 42 l~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 118 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ---LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPN 118 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC---EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCC
T ss_pred EEEEeCCCCEEEEEECCCC---eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCC
Confidence 3667888999999998764 4555566677899999998876555555688999987544322111111111123467
Q ss_pred EEEECCCCcEEEEEeC-----------------CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEE
Q 016769 312 GTSIRPDSKIAATAGW-----------------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVA 374 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~ 374 (383)
.++++|+|+++++.+. .+.|..++.. ++ +..+..+....+.++|+|||+.|++.+.++.|.
T Consensus 119 ~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~ 196 (296)
T 3e5z_A 119 DVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATH 196 (296)
T ss_dssp CEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEE
T ss_pred CEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEE
Confidence 8999999998887321 2345555544 43 444555667789999999999888888899999
Q ss_pred EEeCC
Q 016769 375 LWELY 379 (383)
Q Consensus 375 ~w~~~ 379 (383)
+|++.
T Consensus 197 ~~~~~ 201 (296)
T 3e5z_A 197 RYCLN 201 (296)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99985
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.90 E-value=4.8e-06 Score=73.64 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=77.7
Q ss_pred cCeEEEEEeCCCCceEE-EEcCCcEEEEEccCCCCeeEEee---eeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcC
Q 016769 262 EPVLCLSIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKK---EINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 262 ~~v~~~~~~~~~~~~~s-~~~d~~i~~wdl~~~~~~~~~~~---~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~ 337 (383)
.....++++++++.++. .+.++.|.+|+++..++...... ..........++++.++|++.++...+++|..||.+
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 34567899999887654 45578899999864343321111 111122457889999999988887778899999999
Q ss_pred CCceEEEecccccceeEEEEe-CCCCEE-EEEeC
Q 016769 338 KGSALAILKYHHATCNAVSFS-SDCKLM-ASASE 369 (383)
Q Consensus 338 ~~~~~~~~~~h~~~v~~v~~s-pd~~~l-as~s~ 369 (383)
+++.+..+..+...+.+++|. ||++.| ++...
T Consensus 229 tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 229 TGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp TCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred CceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 999888887777789999999 888854 44443
No 199
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.89 E-value=1.6e-06 Score=80.35 Aligned_cols=278 Identities=13% Similarity=0.094 Sum_probs=159.4
Q ss_pred CCCCeEEEecCC-----CeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecc----------cCCeEEEee
Q 016769 28 QTKPILFAGTTG-----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVKCWD 92 (383)
Q Consensus 28 ~~~~~L~sgs~D-----~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------~D~ti~~Wd 92 (383)
++++.++..... +.|.+.|..+.+.+..+..... . .+.++| ++++++.+. .+++|.++|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~--P--gia~Sp--Dgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL--P--HPVAAE--DGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS--C--EEEECT--TSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC--C--ceEECC--CCCEEEEEeccccccccCCCCCEEEEEE
Confidence 466655554442 6999999988877766543322 1 567777 356555443 478999999
Q ss_pred cCCCCCCCCCeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCce
Q 016769 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKY 172 (383)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (383)
..+.+... .+ . +...... . .+ .......++++++.
T Consensus 156 ~~t~~vv~----~I----------~-v~g~~r~--~-----------~g----------------~~P~~~~~spDGk~- 190 (426)
T 3c75_H 156 PVTFLPIA----DI----------E-LPDAPRF--L-----------VG----------------TYQWMNALTPDNKN- 190 (426)
T ss_dssp TTTCCEEE----EE----------E-ETTCCCC--C-----------BS----------------CCGGGSEECTTSSE-
T ss_pred CCCCcEEE----EE----------E-CCCcccc--c-----------cC----------------CCcceEEEcCCCCE-
Confidence 98764211 11 0 0000000 0 00 00001124456654
Q ss_pred eeeccC-CcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 173 MAVAGE-QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 173 ~~~~g~-~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
+.++.. ..+.|.+.|+.+.+.+.++.-. + |..+ .|.. ...+++.+.||++.+.++.+.
T Consensus 191 lyV~n~~~~~~VsVID~~t~kvv~~I~v~-----------g---~~~~---~p~g---~~~~v~~~~dG~~~~V~~~~~- 249 (426)
T 3c75_H 191 LLFYQFSPAPAVGVVDLEGKTFDRMLDVP-----------D---CYHI---FPAS---PTVFYMNCRDGSLARVDFADG- 249 (426)
T ss_dssp EEEEECSSSCEEEEEETTTTEEEEEEECC-----------S---EEEE---EEEE---TTEEEEEETTSSEEEEECCTT-
T ss_pred EEEEecCCCCeEEEEECCCCeEEEEEEcC-----------C---ceee---ccCC---CcEEEEEcCCCCEEEEECCCC-
Confidence 444433 3578999999999877766421 0 1111 1111 113456667888888888432
Q ss_pred Ccee----eeeccccCe-EEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec----------CCCCeEEEEEC
Q 016769 252 IPLT----AMKVHLEPV-LCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL----------ERPGISGTSIR 316 (383)
Q Consensus 252 ~~~~----~~~~h~~~v-~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~----------~~~~i~~~~~~ 316 (383)
.... .+.....++ ..+.+.+++..++..+..+.+.+.|+...... ....... ...+...++|+
T Consensus 250 ~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~--v~~~~~~~~~~~i~~g~~p~g~~~va~s 327 (426)
T 3c75_H 250 ETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGAT--FRAPIEALTEAERADDWRPGGWQQTAYH 327 (426)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEE--ECCCEESSCTTTGGGTEEECSSSCEEEE
T ss_pred cEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceE--EeeeeeeccccccccccccCCceeeEEc
Confidence 2221 111111222 12455777776666677888888888543211 1111100 00122237899
Q ss_pred CCCcEEEEEeC----------CCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEe-CCCcEEEEeCCC
Q 016769 317 PDSKIAATAGW----------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASAS-EDSTVALWELYP 380 (383)
Q Consensus 317 p~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s-~d~~i~~w~~~~ 380 (383)
|+++.+..+.. +++|.++|+.+.+.+.++.-- .....++|+|||+ ++.++. .++.|.++|+..
T Consensus 328 ~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 328 RQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp GGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred CCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 99876555432 357999999999999887532 2588999999999 888887 599999999854
No 200
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.86 E-value=2e-07 Score=92.88 Aligned_cols=92 Identities=12% Similarity=0.083 Sum_probs=56.4
Q ss_pred CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC---cEEEEEcCCCceEEEec-ccccceeEEEEe
Q 016769 283 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR---RVRIYNYRKGSALAILK-YHHATCNAVSFS 358 (383)
Q Consensus 283 ~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~-~h~~~v~~v~~s 358 (383)
+.|..+|++........ .+..+...+. .|++++++|+....++ .|++||+..+. ...+. .....+..+.++
T Consensus 305 ~~l~~~d~~~~~~~~~~--~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~ 379 (693)
T 3iuj_A 305 RRLVTVDAANPGPAHWR--DLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGK 379 (693)
T ss_dssp CEEEEEETTSCCGGGCE--EEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCC
T ss_pred CEEEEEeCCCCCccccE--EEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecC
Confidence 46777887654321111 1122223333 7888888877666544 78899987443 33343 344567777888
Q ss_pred CCCCEEEEEeCC----CcEEEEeCC
Q 016769 359 SDCKLMASASED----STVALWELY 379 (383)
Q Consensus 359 pd~~~las~s~d----~~i~~w~~~ 379 (383)
||++.|+....+ +.|..||+.
T Consensus 380 ~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 380 HDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp TTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CCCCEEEEEecCCCCCCEEEEEECC
Confidence 998866655544 788888874
No 201
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.82 E-value=3.6e-07 Score=91.02 Aligned_cols=193 Identities=10% Similarity=-0.015 Sum_probs=111.7
Q ss_pred ccCCCCCceeee---ccCCcceEEEEecCCCCee-eEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCC
Q 016769 164 DVPAEGPKYMAV---AGEQLSEVEIWDLNTAERC-TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 239 (383)
Q Consensus 164 ~~~~~~~~~~~~---~g~~~~~i~~Wdl~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~d 239 (383)
.++++|+.+..+ .|+.+.+|++||+++++.+ ..........++ .+.|++ ..++.++.|
T Consensus 127 ~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~--------------~wspDg----~~l~~~~~d 188 (695)
T 2bkl_A 127 AVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATP--------------KWTPDS----KGFYYEWLP 188 (695)
T ss_dssp EECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCC--------------EECTTS----SEEEEEECC
T ss_pred EECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccce--------------EEecCC----CEEEEEEec
Confidence 355677643322 3455578999999998753 110000000111 244432 235556666
Q ss_pred Cc-------------EEEEeCCCCCC---ceeeeeccccCeEEEEEeCCCCceEEEEcCC--cEEEEEccCCCCeeEEee
Q 016769 240 GS-------------ILVWDIRNPGI---PLTAMKVHLEPVLCLSIDESCNGGISGGADQ--KIVLYNLDHSTGSCVIKK 301 (383)
Q Consensus 240 g~-------------i~~wdl~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~--~i~~wdl~~~~~~~~~~~ 301 (383)
.. |++|++.++.. .+.....|...+..+.++++++.++..+.++ ...+|-++..++...
T Consensus 189 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~--- 265 (695)
T 2bkl_A 189 TDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR--- 265 (695)
T ss_dssp CCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE---
T ss_pred CCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE---
Confidence 55 99999987532 1222233445678899999999887776655 334443333222211
Q ss_pred eeecCCCCeEEEEECCCCcEEEEEe---CCCcEEEEEcCCCce---EEEeccc-ccceeEEEEeCCCCEEEEEeCCCcEE
Q 016769 302 EINLERPGISGTSIRPDSKIAATAG---WDRRVRIYNYRKGSA---LAILKYH-HATCNAVSFSSDCKLMASASEDSTVA 374 (383)
Q Consensus 302 ~~~~~~~~i~~~~~~p~~~~l~s~~---~dg~i~iwd~~~~~~---~~~~~~h-~~~v~~v~~spd~~~las~s~d~~i~ 374 (383)
.+..+........+ +++++++.+. .+++|.+||+.+++. ...+..+ ...+..++|+ +++++++...|+..+
T Consensus 266 ~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~ 343 (695)
T 2bkl_A 266 LLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSE 343 (695)
T ss_dssp EEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEE
T ss_pred EeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEE
Confidence 11122233444445 5666444443 258999999987653 3333333 4467888998 778999999999999
Q ss_pred EEeCC
Q 016769 375 LWELY 379 (383)
Q Consensus 375 ~w~~~ 379 (383)
||.+.
T Consensus 344 l~~~~ 348 (695)
T 2bkl_A 344 VRVAT 348 (695)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98654
No 202
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.82 E-value=5.7e-08 Score=88.91 Aligned_cols=129 Identities=6% Similarity=-0.017 Sum_probs=91.1
Q ss_pred EEEEEeCCCcEEEEeCCCCC----------CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee
Q 016769 232 NVLAGYEDGSILVWDIRNPG----------IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK 301 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~----------~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~ 301 (383)
.+++|+.+ .+++|++.+.. .+.... .+.. |..++| ++..++++ .++.|++||+........
T Consensus 51 ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~--- 121 (388)
T 1xip_A 51 LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRT--- 121 (388)
T ss_dssp EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEE---
T ss_pred EEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCc---
Confidence 46677776 56679864211 111222 2344 999999 66777777 889999999876542211
Q ss_pred eeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 302 EINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 302 ~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
...+...+.++.+.+. .+++++.||.+.+||+..+.... +...|.|++|||+| ++.|..||.|++|+.
T Consensus 122 -~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 122 -VTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAW 189 (388)
T ss_dssp -EEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEE
T ss_pred -cceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcC
Confidence 2223345777666543 38888999999999998877643 45689999999999 688999999999965
No 203
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.80 E-value=3.5e-07 Score=91.31 Aligned_cols=191 Identities=7% Similarity=-0.015 Sum_probs=112.7
Q ss_pred ccCCCCCceeeeccCCc----ceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCC
Q 016769 164 DVPAEGPKYMAVAGEQL----SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 239 (383)
Q Consensus 164 ~~~~~~~~~~~~~g~~~----~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~d 239 (383)
.++++|+. ++.+.+.. ..|++||+++++.+..........++ .+.|++ ..++.++.+
T Consensus 131 ~~SPDg~~-la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~--------------~wspDg----~~l~~~~~~ 191 (710)
T 2xdw_A 131 AFSEDGEY-FAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCM--------------AWTHDG----KGMFYNAYP 191 (710)
T ss_dssp EECTTSSE-EEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCE--------------EECTTS----SEEEEEECC
T ss_pred EECCCCCE-EEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceE--------------EEEeCC----CEEEEEEEC
Confidence 35567654 43332222 38999999998865422211111111 233332 134445555
Q ss_pred Cc----------------EEEEeCCCCCCc-eeeeec--cccCeEEEEEeCCCCceEEEEc-----CCcEEEEEccC---
Q 016769 240 GS----------------ILVWDIRNPGIP-LTAMKV--HLEPVLCLSIDESCNGGISGGA-----DQKIVLYNLDH--- 292 (383)
Q Consensus 240 g~----------------i~~wdl~~~~~~-~~~~~~--h~~~v~~~~~~~~~~~~~s~~~-----d~~i~~wdl~~--- 292 (383)
+. |++|++.++... ...... |...+..+.++++++.++..+. +..|.+||++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp CCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred CccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccc
Confidence 44 999999764321 122222 3445678899999998876654 56799999875
Q ss_pred ---CCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC----CcEEEEEcCCCce--EEEeccccc--ceeEEEEeCCC
Q 016769 293 ---STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD----RRVRIYNYRKGSA--LAILKYHHA--TCNAVSFSSDC 361 (383)
Q Consensus 293 ---~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d----g~i~iwd~~~~~~--~~~~~~h~~--~v~~v~~spd~ 361 (383)
...... .+..+...+.. .|+|+|+.|+..+.+ +.|.+||+.++.. ...+..|.. .+..++|++++
T Consensus 272 ~~~~~~~~~---~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 347 (710)
T 2xdw_A 272 GITGILKWV---KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN 347 (710)
T ss_dssp SSCSSCCCE---EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTT
T ss_pred ccCCccceE---EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCC
Confidence 221111 11122223333 478888877766653 3699999987642 233444543 68889999888
Q ss_pred CEEEEEeCCCcEEEEe
Q 016769 362 KLMASASEDSTVALWE 377 (383)
Q Consensus 362 ~~las~s~d~~i~~w~ 377 (383)
.+++++..|+..+||-
T Consensus 348 ~lv~~~~~~g~~~l~~ 363 (710)
T 2xdw_A 348 FLVLCYLHDVKNTLQL 363 (710)
T ss_dssp EEEEEEEETTEEEEEE
T ss_pred EEEEEEEECCEEEEEE
Confidence 8999999999665553
No 204
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.80 E-value=6.8e-07 Score=80.97 Aligned_cols=110 Identities=13% Similarity=0.014 Sum_probs=69.6
Q ss_pred eEEEEEeCCCCceEEEEcCC-cEEEEEccC---CCCe--eEEe-eeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEc
Q 016769 264 VLCLSIDESCNGGISGGADQ-KIVLYNLDH---STGS--CVIK-KEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336 (383)
Q Consensus 264 v~~~~~~~~~~~~~s~~~d~-~i~~wdl~~---~~~~--~~~~-~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~ 336 (383)
+..+++++++..++.+..++ .+..++.+. .... .... ...........+++++++|+++++...+++|.+||.
T Consensus 197 ~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred cceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 45688999988887776665 344443221 0000 0000 000011234567999999999999889999999999
Q ss_pred CCCceEEEecc-cccceeEEEEeCCCCEEEEEeCCCcE
Q 016769 337 RKGSALAILKY-HHATCNAVSFSSDCKLMASASEDSTV 373 (383)
Q Consensus 337 ~~~~~~~~~~~-h~~~v~~v~~spd~~~las~s~d~~i 373 (383)
.+++....... +...+.+++|.|+++++++.+..+.+
T Consensus 277 ~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 277 ADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp TTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred CCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 56654332221 24568899999999988888765544
No 205
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.79 E-value=9.3e-07 Score=76.71 Aligned_cols=141 Identities=9% Similarity=0.010 Sum_probs=97.4
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeee-ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMK-VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
+..+..++.|.+||...... ..+. .....+..+.+++++...++...++.|.+|+..... ... ........+.
T Consensus 80 l~v~~~~~~i~~~d~~~~~~--~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~--~~~--~~~~~~~~p~ 153 (270)
T 1rwi_B 80 VYVTDFNNRVVTLAAGSNNQ--TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT--QTV--LPFTGLNDPD 153 (270)
T ss_dssp EEEEETTTEEEEECTTCSCC--EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS--CEE--CCCCSCCSCC
T ss_pred EEEEcCCCEEEEEeCCCceE--eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCce--eEe--eccccCCCce
Confidence 33333388999999765322 2222 223567889999988755555667889999654322 111 1111223578
Q ss_pred EEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 312 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+++++|+++++++...++.|.+||............+...+..++++|+|.++++...++.|.+|+..
T Consensus 154 ~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 154 GVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred eEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 89999999988877778999999998766544333344678899999999988888889999999874
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.78 E-value=9.1e-06 Score=74.10 Aligned_cols=119 Identities=14% Similarity=0.085 Sum_probs=73.4
Q ss_pred EeCCCcEEEEeCCCCCC-ceeeee--------c--cccCeEEEEEeCCCCceEEEEc----------CCcEEEEEccCCC
Q 016769 236 GYEDGSILVWDIRNPGI-PLTAMK--------V--HLEPVLCLSIDESCNGGISGGA----------DQKIVLYNLDHST 294 (383)
Q Consensus 236 g~~dg~i~~wdl~~~~~-~~~~~~--------~--h~~~v~~~~~~~~~~~~~s~~~----------d~~i~~wdl~~~~ 294 (383)
.+.+|+|.+.|+..... ....+. . .-+....+.+++.+..++.... .++|.+.|+...
T Consensus 243 vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~- 321 (386)
T 3sjl_D 243 PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG- 321 (386)
T ss_dssp EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC-
T ss_pred EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCC-
Confidence 45589999999875431 111111 0 1123345777888777766432 245667776543
Q ss_pred CeeEEeeeeecCCCCeEEEEECCCCc-EEEEEe-CCCcEEEEEcCCCceEEEecccccceeEEEEeCC
Q 016769 295 GSCVIKKEINLERPGISGTSIRPDSK-IAATAG-WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSD 360 (383)
Q Consensus 295 ~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd 360 (383)
+........ ..+.+++|+||++ +|+++. .+++|.++|..+++.+.++..- ...+.+.+++|
T Consensus 322 -kv~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 322 -ERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp -CEEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred -eEEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 332222221 2577999999997 666554 5899999999999999887532 22344567776
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.78 E-value=4.2e-06 Score=74.33 Aligned_cols=126 Identities=9% Similarity=0.030 Sum_probs=79.7
Q ss_pred cEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcC------CcEEEEEccCCCCeeEEeeeeecCCCCeEEEE
Q 016769 241 SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD------QKIVLYNLDHSTGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 241 ~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d------~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~ 314 (383)
.|..||..++.. ..+. .......+++++++..++.+... +.|.+|+++... ................+++
T Consensus 170 ~v~~~d~~~g~~--~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~ 245 (305)
T 3dr2_A 170 SVYRLPPDGSPL--QRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFC 245 (305)
T ss_dssp EEEEECSSSCCC--EEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEE
T ss_pred eEEEEcCCCCcE--EEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEE
Confidence 455566544322 1122 33455678999999877776665 689999987432 1100111111234456789
Q ss_pred ECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEE
Q 016769 315 IRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVA 374 (383)
Q Consensus 315 ~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~ 374 (383)
+.++|++.+ ++.++ |.+||. .++.+..+..+. .+..++|+|+++.|..++.++..+
T Consensus 246 ~d~~G~lwv-~~~~g-v~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 246 VDRGGWLWS-SSGTG-VCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp ECTTSCEEE-CCSSE-EEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred ECCCCCEEE-ecCCc-EEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 999999555 44554 999998 577777666544 588999999998887777764333
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.77 E-value=2.1e-07 Score=85.11 Aligned_cols=121 Identities=12% Similarity=0.149 Sum_probs=91.6
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.|+++ .++.|++||+++.. .....+.|..++..+.+.+. .+++++.||.+.+||+...... . ....++
T Consensus 99 ~L~v~-~~~~l~v~dv~sl~-~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~----~----~~~~Vs 166 (388)
T 1xip_A 99 QVLVS-TRNALYSLDLEELS-EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK----Q----LAQNVT 166 (388)
T ss_dssp EEEEE-ESSEEEEEESSSTT-CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE----E----EEESEE
T ss_pred EEEEE-cCCcEEEEEchhhh-ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc----c----ccCCce
Confidence 46666 88999999998744 23445567777877666432 3888999999999999754321 1 124799
Q ss_pred EEEECCCCcEEEEEeCCCcEEEEEcCCCce--EEEe------c---ccccceeEEEEeCCCCEEEE
Q 016769 312 GTSIRPDSKIAATAGWDRRVRIYNYRKGSA--LAIL------K---YHHATCNAVSFSSDCKLMAS 366 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~--~~~~------~---~h~~~v~~v~~spd~~~las 366 (383)
+++|+|.| ++.|..||++++|+.+.++. ..++ . +|...|.+|.|.+++++|++
T Consensus 167 ~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 167 SFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999999 67789999999998877664 4445 2 47788999999999998876
No 209
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.77 E-value=2e-07 Score=84.21 Aligned_cols=123 Identities=10% Similarity=0.069 Sum_probs=81.9
Q ss_pred CcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCC-------cEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ-------KIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~-------~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
..|.+||+.++. .+..+.. . .+..+.|++++ .+++++.+. ...+|.++ ++.... +... ..+..
T Consensus 152 ~~l~~~d~~~~~-~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~---l~~~-~~~~~ 221 (347)
T 2gop_A 152 TTFWIFDTESEE-VIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEK---MFEK-VSFYA 221 (347)
T ss_dssp EEEEEEETTTTE-EEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEE---EEEE-ESEEE
T ss_pred ceEEEEECCCCe-EEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEE---eccC-cceee
Confidence 578999987643 2233433 3 67788999988 666665542 45677666 332211 1111 23433
Q ss_pred EEECCCCcEEEEEeCCC--------cEEEEEcCCCceEEEecccccceeE-EEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 313 TSIRPDSKIAATAGWDR--------RVRIYNYRKGSALAILKYHHATCNA-VSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~h~~~v~~-v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+ +|||++|+.++.++ .|.+|| +++.......|...+.. +.|+ |+ ++++++.|+.++|| +.
T Consensus 222 ~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 222 V--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp E--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred E--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 3 89999888877553 677777 55554445566777886 8999 98 99999999999999 74
No 210
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.75 E-value=1.8e-05 Score=69.38 Aligned_cols=140 Identities=8% Similarity=-0.043 Sum_probs=94.7
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
.++...++.|..||. +..........+...+..+.+++++...++...++.|.+||. .. .... .........+.+
T Consensus 113 ~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g--~~~~-~~~~~~~~~~~~ 187 (299)
T 2z2n_A 113 WFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SG--DITE-FKIPTPASGPVG 187 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC--CEEE-EECSSTTCCEEE
T ss_pred EEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CC--cEEE-eeCCCCCCccee
Confidence 445556789999997 322211112223456788999988765555545678999987 22 2211 112222346889
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCCCceEE-EecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALA-ILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+++.+++++.++...++.|.+||. +++... ....+...+.+++++|+|+++++...++.|..||.
T Consensus 188 i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 188 ITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp EEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred EEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 999999998777767889999999 665432 23335567899999999998887777888999986
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.71 E-value=3.7e-05 Score=68.95 Aligned_cols=106 Identities=14% Similarity=0.166 Sum_probs=72.9
Q ss_pred CeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCC-e----eEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEc
Q 016769 263 PVLCLSIDESCNGGISG-GADQKIVLYNLDHSTG-S----CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 336 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~-~----~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~ 336 (383)
....+.++++++.++.+ ..++.|.+||++..++ . ..+ ...........++++.++|++.++...++.|.+||.
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~-~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVF-IDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEE-EECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEE-EECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 45678888888766544 4568899999862222 1 111 111112345678999999998877767789999998
Q ss_pred CCCceEEEecccccceeEEEEe-CCCCEE-EEEeCC
Q 016769 337 RKGSALAILKYHHATCNAVSFS-SDCKLM-ASASED 370 (383)
Q Consensus 337 ~~~~~~~~~~~h~~~v~~v~~s-pd~~~l-as~s~d 370 (383)
+++.+..+..+...+.+++|+ ||++.| ++...+
T Consensus 259 -~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 259 -DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred -CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 677777777677789999998 898855 444444
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.60 E-value=5.4e-06 Score=76.98 Aligned_cols=188 Identities=10% Similarity=-0.024 Sum_probs=113.0
Q ss_pred CCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCC--cEE
Q 016769 166 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG--SIL 243 (383)
Q Consensus 166 ~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg--~i~ 243 (383)
.+++. +.++...++.|+.||+.++.......... ... + .+.+. +. .++++..++ .|.
T Consensus 139 d~~g~--lyv~d~~~~~I~~id~~~g~~~~~~~~~~---------~~~---i---a~~~~---g~-~l~~~d~~~~~~I~ 197 (409)
T 3hrp_A 139 VGNNT--VLAYQRDDPRVRLISVDDNKVTTVHPGFK---------GGK---P---AVTKD---KQ-RVYSIGWEGTHTVY 197 (409)
T ss_dssp CSTTE--EEEEETTTTEEEEEETTTTEEEEEEETCC---------BCB---C---EECTT---SS-EEEEEBSSTTCEEE
T ss_pred eCCCC--EEEEecCCCcEEEEECCCCEEEEeeccCC---------CCc---e---eEecC---CC-cEEEEecCCCceEE
Confidence 34443 44445556789999998776433322110 001 1 12222 11 355555544 788
Q ss_pred EEeCCCCCCceeee---ec-cccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee-eeecCCCCe-E-EEEEC
Q 016769 244 VWDIRNPGIPLTAM---KV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK-EINLERPGI-S-GTSIR 316 (383)
Q Consensus 244 ~wdl~~~~~~~~~~---~~-h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~-~~~~~~~~i-~-~~~~~ 316 (383)
+||...... ...+ .. .......+++++....++.+..++.|..||.+.... ..+.. ........- . .++|+
T Consensus 198 ~~d~~~~~~-~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~ 275 (409)
T 3hrp_A 198 VYMKASGWA-PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYY 275 (409)
T ss_dssp EEEGGGTTC-EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEE
T ss_pred EEEcCCCce-eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEe
Confidence 888765332 2222 11 334567889999555666677788899999875431 11100 011111111 2 89999
Q ss_pred CC-CcEEEEEeCCCcEEEEEcCCCceEEEecccc---------------cceeEEEEeCCCCEEEEEe-CCCcEEEEeC
Q 016769 317 PD-SKIAATAGWDRRVRIYNYRKGSALAILKYHH---------------ATCNAVSFSSDCKLMASAS-EDSTVALWEL 378 (383)
Q Consensus 317 p~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~---------------~~v~~v~~spd~~~las~s-~d~~i~~w~~ 378 (383)
|+ +.++++-..+++|+.|+.+.. ...+.++. .....++|+|+|+++++-+ .++.|+.|++
T Consensus 276 p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 276 FVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp TTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEET
T ss_pred CCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEEC
Confidence 94 667777778899999998643 33333332 3578999999999889888 8999999995
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.57 E-value=2.1e-08 Score=92.01 Aligned_cols=174 Identities=12% Similarity=-0.005 Sum_probs=89.4
Q ss_pred ccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCcee
Q 016769 176 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 255 (383)
Q Consensus 176 ~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~ 255 (383)
+++.++.++.||..+++.+.++.. .... +.. +.. .+ ..+++++.|+.|..||.+++.. +-
T Consensus 14 ~gs~dg~v~a~d~~tG~~~W~~~~-~~~~-----------s~p---~~~---~g-~~~v~~s~dg~l~a~d~~tG~~-~w 73 (369)
T 2hz6_A 14 VSTLDGSLHAVSKRTGSIKWTLKE-DPVL-----------QVP---THV---EE-PAFLPDPNDGSLYTLGSKNNEG-LT 73 (369)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEC-CCSC-----------CCC------------CCEEECTTTCCEEEC-----CC-SE
T ss_pred EEcCCCEEEEEECCCCCEEEEecC-CCce-----------ecc---eEc---CC-CEEEEeCCCCEEEEEECCCCce-ee
Confidence 345678999999999998766643 1110 000 111 11 1355668999999999876443 22
Q ss_pred eeecccc-CeE-EEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEE
Q 016769 256 AMKVHLE-PVL-CLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 333 (383)
Q Consensus 256 ~~~~h~~-~v~-~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~i 333 (383)
..+.+.. .+. ...+. .+..+++++.|+.+..||.++.. ...... ... ...++|++..+++++.|+.|+.
T Consensus 74 ~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~--~~w~~~--~~~----~~~~~p~~~~v~~~~~dg~v~a 144 (369)
T 2hz6_A 74 KLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGE--KQQTLS--SAF----ADSLSPSTSLLYLGRTEYTITM 144 (369)
T ss_dssp ECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEEC
T ss_pred eeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCc--EEEEec--CCC----cccccccCCEEEEEecCCEEEE
Confidence 2222211 000 00011 12345677889999999886543 222111 111 2345678888999999999999
Q ss_pred EEcCCCceEEEecccccceeEEEEeCCC---CEEEEEeCCCcEEEEeCCC
Q 016769 334 YNYRKGSALAILKYHHATCNAVSFSSDC---KLMASASEDSTVALWELYP 380 (383)
Q Consensus 334 wd~~~~~~~~~~~~h~~~v~~v~~spd~---~~las~s~d~~i~~w~~~~ 380 (383)
||..+++.+..+..+. ....+++++. ..++.++.|+.|..||...
T Consensus 145 ~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 145 YDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp CCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTT
T ss_pred EECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCC
Confidence 9999998776554221 2223344432 4567789999999999754
No 214
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.56 E-value=0.00023 Score=65.07 Aligned_cols=247 Identities=11% Similarity=0.029 Sum_probs=132.2
Q ss_pred eEEEeCCCCeEEEec----------CCCeEEEeeCcccccccccccccc-----cceeeeeeecCCCCcceeEecc-c-C
Q 016769 23 DVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVHSA-----AHGIVSVATGPSIGLNKVISQG-R-D 85 (383)
Q Consensus 23 ~v~f~~~~~~L~sgs----------~D~~v~vW~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~s~~-~-D 85 (383)
.++|+|||++|+.+. .++.|.+||..+.+.+..+..... ...-..+.++| ++++|+.+. . +
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp--DG~~l~v~n~~~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP--NNADLLFFQFAAG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC--CCCEEEEEecCCC
Confidence 789999999999875 367899999977655443322100 01122466777 467776654 3 5
Q ss_pred CeEEEeecCCCCCCCCCeee-eecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecc
Q 016769 86 GTVKCWDIENGGLSSNPSLT-IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDD 164 (383)
Q Consensus 86 ~ti~~Wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (383)
++|.++| ++++... . +.. ..| . .
T Consensus 148 ~~v~viD-~t~~~~~----~~i~~---~~~---------------------~---------------------------~ 171 (373)
T 2mad_H 148 PAVGLVV-QGGSSDD----QLLSS---PTC---------------------Y---------------------------H 171 (373)
T ss_pred CeEEEEE-CCCCEEe----EEcCC---Cce---------------------E---------------------------E
Confidence 8899999 8764211 0 000 000 0 0
Q ss_pred cCCCCCceeeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEE
Q 016769 165 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 244 (383)
Q Consensus 165 ~~~~~~~~~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~ 244 (383)
+.+.+++.++ +...++.+.++|+ +++......... .+......+.. ..+.+. +...++.. .++.|.+
T Consensus 172 ~~~~~~~~~~-~~~~dg~~~~vd~-~g~~~~~~~~~~-----~~~~~~p~~~~--~~~~~~---~~~~~~~~-~~~~v~v 238 (373)
T 2mad_H 172 IHPGAPSTFY-LLCAQGGLAKTDH-AGGAAGAGLVGA-----MLTAAQNLLTQ--PAQANK---SGRIVWPV-YSGKILQ 238 (373)
T ss_pred EEeCCCceEE-EEcCCCCEEEEEC-CCcEEEEEeccc-----cccCCcceeec--ceeEec---CCEEEEEc-CCceEEE
Confidence 0112222122 2234678888888 766543221000 00000000000 001111 11122222 5678888
Q ss_pred EeCCCCCC-ceeeeecc----------ccCeEEEEEeCCCCceEEEEc----------CCcEEEEEccCCCCeeEEeeee
Q 016769 245 WDIRNPGI-PLTAMKVH----------LEPVLCLSIDESCNGGISGGA----------DQKIVLYNLDHSTGSCVIKKEI 303 (383)
Q Consensus 245 wdl~~~~~-~~~~~~~h----------~~~v~~~~~~~~~~~~~s~~~----------d~~i~~wdl~~~~~~~~~~~~~ 303 (383)
.|+..... .+..+... -.....+.+++++..++.... .+.|.++|+.... .. ..+
T Consensus 239 id~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~--vv--~~i 314 (373)
T 2mad_H 239 ADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ--TS--SQI 314 (373)
T ss_pred EeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE--EE--EEE
Confidence 88864321 11111110 112334677888777665432 3568888876432 21 222
Q ss_pred ecCCCCeEEEEECCCCc-EEEEEe-CCCcEEEEEcCCCceEEEe
Q 016769 304 NLERPGISGTSIRPDSK-IAATAG-WDRRVRIYNYRKGSALAIL 345 (383)
Q Consensus 304 ~~~~~~i~~~~~~p~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~ 345 (383)
... ....+++|+||++ .++++. .+++|.+||+.+++.+.++
T Consensus 315 ~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 315 SLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 222 3578999999999 777777 4899999999999988773
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.53 E-value=5.8e-07 Score=82.33 Aligned_cols=157 Identities=13% Similarity=0.025 Sum_probs=78.7
Q ss_pred eccCCcceEEEEecCCCCeeeEeccCcC---CCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCC
Q 016769 175 VAGEQLSEVEIWDLNTAERCTRLHQNSC---GGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 251 (383)
Q Consensus 175 ~~g~~~~~i~~Wdl~~~~~~~~~~~~~~---~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~ 251 (383)
++++.++.++.||.++++.+.+...... ..++.. . .. ..+++|+.|+.|..||.+++.
T Consensus 53 v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~---------------~--~~--~~v~~g~~dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 53 LPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCR---------------S--SD--GILYMGKKQDIWYVIDLLTGE 113 (369)
T ss_dssp EECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------------------------CCCCEEEEEEEEECCC---
T ss_pred EEeCCCCEEEEEECCCCceeeeeeccCccccccCceE---------------e--cC--CEEEEEeCCCEEEEEECCCCc
Confidence 3445678999999998886555432100 000000 0 01 135667789999999998754
Q ss_pred CceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCC---cEEEEEeCC
Q 016769 252 IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS---KIAATAGWD 328 (383)
Q Consensus 252 ~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~---~~l~s~~~d 328 (383)
. +-.+..+. ...+.+.+..+++++.|+.+..||.+.......+ ... .....++.++. ..++.++.|
T Consensus 114 ~-~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~--~~~----~~~~~~~~~~~~~~~~v~~~~~d 182 (369)
T 2hz6_A 114 K-QQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA--TYF----DYAASLPEDDVDYKMSHFVSNGD 182 (369)
T ss_dssp ------------------------EEEEEEEEEEECCCSSSSSCCCEE--EEE----EECCBCCCCCTTCCCCEEEEETS
T ss_pred E-EEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeE--ecc----cccCccccCCccccceEEEECCC
Confidence 3 32232222 1223345567788889999999998754432222 111 11223344432 456678899
Q ss_pred CcEEEEEcCCCceEEEeccccccee-EEEEeCCCC
Q 016769 329 RRVRIYNYRKGSALAILKYHHATCN-AVSFSSDCK 362 (383)
Q Consensus 329 g~i~iwd~~~~~~~~~~~~h~~~v~-~v~~spd~~ 362 (383)
|.|+.||..+++.+...+ ...++. ...+++||.
T Consensus 183 g~v~a~d~~tG~~~W~~~-~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 183 GLVVTVDSESGDVLWIQN-YASPVVAFYVWQREGL 216 (369)
T ss_dssp CEEEEECTTTCCEEEEEE-CSSCEEEEEECTTSSC
T ss_pred CEEEEEECCCCcEEEEec-CCCceEEEEEecCCce
Confidence 999999999999887765 333443 344556664
No 216
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.53 E-value=1.4e-05 Score=72.78 Aligned_cols=140 Identities=11% Similarity=0.040 Sum_probs=83.4
Q ss_pred EEEEeCCCcEEEEeCCC----CCCce----eeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee
Q 016769 233 VLAGYEDGSILVWDIRN----PGIPL----TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN 304 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~----~~~~~----~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~ 304 (383)
.++.+.|+++.+.|+.. .+... ..+.....|. . .+.+..++..+. +.+.+.|+....... ...+.
T Consensus 178 ~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v--~~~~~ 250 (368)
T 1mda_H 178 HYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATM--KAAID 250 (368)
T ss_dssp EECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEE--ECCCC
T ss_pred EEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceE--EEEEE
Confidence 34556688888888765 11111 0111122343 2 444444455455 788888875432111 11111
Q ss_pred cC-------C---CCeEEEEECCCCcEEEEEeC---------CCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EE
Q 016769 305 LE-------R---PGISGTSIRPDSKIAATAGW---------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LM 364 (383)
Q Consensus 305 ~~-------~---~~i~~~~~~p~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~l 364 (383)
.. . .+...++|+|+++.+..+.. ++.+.++|+.+.+.+..+.-.. ....++|+|||+ .+
T Consensus 251 ~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~ 329 (368)
T 1mda_H 251 GNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDN 329 (368)
T ss_dssp SSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEE
T ss_pred eccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEE
Confidence 10 0 11122789999887665432 2356699999999888776444 588999999998 56
Q ss_pred EEEe-CCCcEEEEeCCC
Q 016769 365 ASAS-EDSTVALWELYP 380 (383)
Q Consensus 365 as~s-~d~~i~~w~~~~ 380 (383)
++.. .++.|.++|+..
T Consensus 330 va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 330 YANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEETTTTEEEEEESSS
T ss_pred EEccCCCCeEEEEECCC
Confidence 6666 599999999853
No 217
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.53 E-value=1.2e-05 Score=80.74 Aligned_cols=135 Identities=6% Similarity=0.007 Sum_probs=84.6
Q ss_pred cEEEEeCCCCCC-ceeeeec--cccCeEEEEEeCCCCceEEEEcCC-----cEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 241 SILVWDIRNPGI-PLTAMKV--HLEPVLCLSIDESCNGGISGGADQ-----KIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 241 ~i~~wdl~~~~~-~~~~~~~--h~~~v~~~~~~~~~~~~~s~~~d~-----~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
.|.+|++.++.. ....... +...+..+.++++++.++..+.++ .|.+||++...... .. .+.........
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~-~~-~l~~~~~~~~~ 321 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGP-VT-ALIPDLKAQWD 321 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECC-CE-EEECSSSSCEE
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcc-cE-EecCCCCceEE
Confidence 489999876432 1122222 223477889999999887666543 78999987542110 01 11112222333
Q ss_pred EEECCCCcEEEEEeCC----CcEEEEEcCCC--ceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 313 TSIRPDSKIAATAGWD----RRVRIYNYRKG--SALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~d----g~i~iwd~~~~--~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
. ++|+++.|+..+.+ +.|.+||+.++ +....+..+...+..++|+ ++.++++...|+..+||.+.
T Consensus 322 ~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 322 F-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 3 34888888877764 45999999875 3333444455556678887 66788999999999888653
No 218
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.49 E-value=0.00029 Score=64.22 Aligned_cols=272 Identities=14% Similarity=0.089 Sum_probs=142.9
Q ss_pred CCeEEEecCCCeEEEeeCcccccccccccccccceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCCCeeeeecC
Q 016769 30 KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTN 109 (383)
Q Consensus 30 ~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~~~~~~~~~ 109 (383)
+..|+.++.|+.|..+|..+++..-...... .+.+. +...+..++.++.++.+..+|.++++. .+..
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~---~~~~~---p~~~~~~v~v~~~~g~l~~~d~~tG~~----~W~~--- 169 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAG---EALSR---PVVSDGLVLIHTSNGQLQALNEADGAV----KWTV--- 169 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSS---CCCSC---CEEETTEEEEECTTSEEEEEETTTCCE----EEEE---
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCC---ceEcC---CEEECCEEEEEcCCCeEEEEECCCCcE----EEEE---
Confidence 4567778889999999988776542221111 11110 111135677778889999999887742 1110
Q ss_pred ceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcceEEEEecC
Q 016769 110 SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLSEVEIWDLN 189 (383)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Wdl~ 189 (383)
.... +... . . . .....+ . +. .+. .+..++.+..+|.+
T Consensus 170 -------~~~~-~~~~--~-~-------------------~------~~~~~~----~-~~-~v~-~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 170 -------NLDM-PSLS--L-R-------------------G------ESAPTT----A-FG-AAV-VGGDNGRVSAVLME 206 (376)
T ss_dssp -------ECCC---------C-------------------C------CCCCEE----E-TT-EEE-ECCTTTEEEEEETT
T ss_pred -------eCCC-Ccee--e-c-------------------C------CCCcEE----E-CC-EEE-EEcCCCEEEEEECC
Confidence 0000 0000 0 0 0 000000 1 11 222 34556789999999
Q ss_pred CCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEE
Q 016769 190 TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSI 269 (383)
Q Consensus 190 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~ 269 (383)
+++.+.+..............-.......+ . .. ..+..++.++.|..+|.+++.. +-.. .......+..
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~--~----~~--~~v~~~~~~g~l~~~d~~tG~~-~w~~--~~~~~~~~~~ 275 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPV--V----VN--GVVFALAYNGNLTALDLRSGQI-MWKR--ELGSVNDFIV 275 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCE--E----ET--TEEEEECTTSCEEEEETTTCCE-EEEE--CCCCEEEEEE
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcE--E----EC--CEEEEEecCcEEEEEECCCCcE-Eeec--cCCCCCCceE
Confidence 988765554211000000000000000000 0 01 1466778899999999887542 2111 1223334444
Q ss_pred eCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccc
Q 016769 270 DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 349 (383)
Q Consensus 270 ~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~ 349 (383)
+ +..++.++.++.+..+|.++. ........ ..........+ .+..|+.++.+|.+..+|..+++.+.......
T Consensus 276 ~--~~~l~~~~~~g~l~~~d~~tG--~~~w~~~~-~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~ 348 (376)
T 3q7m_A 276 D--GNRIYLVDQNDRVMALTIDGG--VTLWTQSD-LLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDS 348 (376)
T ss_dssp E--TTEEEEEETTCCEEEEETTTC--CEEEEECT-TTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCT
T ss_pred E--CCEEEEEcCCCeEEEEECCCC--cEEEeecc-cCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCC
Confidence 4 346777888999999988654 33332220 11112222222 24567888999999999999999887665433
Q ss_pred cceeE-EEEeCCCCEEEEEeCCCcEEEEe
Q 016769 350 ATCNA-VSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 350 ~~v~~-v~~spd~~~las~s~d~~i~~w~ 377 (383)
..+.+ ... .+..|..++.||.|..|+
T Consensus 349 ~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 349 SGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred CcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 33322 222 245778899999999987
No 219
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.46 E-value=0.00043 Score=63.05 Aligned_cols=267 Identities=8% Similarity=0.048 Sum_probs=144.1
Q ss_pred CCCeEEEecCCCeEEEeeCcccccccccccccc-------cceeeeeeecCCCCcceeEecccCCeEEEeecCCCCCCCC
Q 016769 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-------AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN 101 (383)
Q Consensus 29 ~~~~L~sgs~D~~v~vW~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~s~~~D~ti~~Wd~~~~~~~~~ 101 (383)
++..|+.++.++.|..+|..+++.+-....... ...+.+. +...+..++.++.|+.|..+|.++++.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~v~~~~g~l~a~d~~tG~~--- 125 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG---VTVSGGHVYIGSEKAQVYALNTSDGTV--- 125 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE---EEEETTEEEEEETTSEEEEEETTTCCE---
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC---ceEeCCEEEEEcCCCEEEEEECCCCCE---
Confidence 456788889999999999987765422111100 1111111 111235677788889999999988742
Q ss_pred CeeeeecCceeeeeEEeeccccccccccCCCCccceeccCcccccCccccccccCCccceecccCCCCCceeeeccCCcc
Q 016769 102 PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKESNRSFEIIDDVPAEGPKYMAVAGEQLS 181 (383)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 181 (383)
.+.. .+.. . .. ....+ . +. .+.+ +..++
T Consensus 126 -~W~~----------~~~~-~---------------------~~------------~~p~~----~-~~-~v~v-~~~~g 153 (376)
T 3q7m_A 126 -AWQT----------KVAG-E---------------------AL------------SRPVV----S-DG-LVLI-HTSNG 153 (376)
T ss_dssp -EEEE----------ECSS-C---------------------CC------------SCCEE----E-TT-EEEE-ECTTS
T ss_pred -EEEE----------eCCC-c---------------------eE------------cCCEE----E-CC-EEEE-EcCCC
Confidence 1110 0000 0 00 00000 1 11 1222 34567
Q ss_pred eEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeeccc
Q 016769 182 EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL 261 (383)
Q Consensus 182 ~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~ 261 (383)
.+..+|.++++.+-+.......... ......+ . .. ..++.++.++.|..+|.+++.. +-......
T Consensus 154 ~l~~~d~~tG~~~W~~~~~~~~~~~------~~~~~~~--~----~~--~~v~~g~~~g~l~~~d~~tG~~-~w~~~~~~ 218 (376)
T 3q7m_A 154 QLQALNEADGAVKWTVNLDMPSLSL------RGESAPT--T----AF--GAAVVGGDNGRVSAVLMEQGQM-IWQQRISQ 218 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC-----------CCCCCCE--E----ET--TEEEECCTTTEEEEEETTTCCE-EEEEECCC
T ss_pred eEEEEECCCCcEEEEEeCCCCceee------cCCCCcE--E----EC--CEEEEEcCCCEEEEEECCCCcE-EEEEeccc
Confidence 8999999999877655432110000 0000000 0 01 1467788899999999877542 21111110
Q ss_pred c-------C---eEE-EEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCc
Q 016769 262 E-------P---VLC-LSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRR 330 (383)
Q Consensus 262 ~-------~---v~~-~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~ 330 (383)
. . +.. ..+. +..++.++.++.+..+|.... ....... ......... ++..+..++.++.
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~--~~~v~~~~~~g~l~~~d~~tG--~~~w~~~----~~~~~~~~~--~~~~l~~~~~~g~ 288 (376)
T 3q7m_A 219 ATGSTEIDRLSDVDTTPVVV--NGVVFALAYNGNLTALDLRSG--QIMWKRE----LGSVNDFIV--DGNRIYLVDQNDR 288 (376)
T ss_dssp -----------CCCCCCEEE--TTEEEEECTTSCEEEEETTTC--CEEEEEC----CCCEEEEEE--ETTEEEEEETTCC
T ss_pred CCCCcccccccccCCCcEEE--CCEEEEEecCcEEEEEECCCC--cEEeecc----CCCCCCceE--ECCEEEEEcCCCe
Confidence 0 0 000 0111 245667778899999987644 3332221 123344444 3456777888999
Q ss_pred EEEEEcCCCceEEEeccc-ccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 331 VRIYNYRKGSALAILKYH-HATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 331 i~iwd~~~~~~~~~~~~h-~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+..+|..+++.+...... ...+..... .+..|..++.+|.+.++|...
T Consensus 289 l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 289 VMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp EEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTT
T ss_pred EEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCC
Confidence 999999999988766522 222222333 246788889999999998754
No 220
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.45 E-value=3.2e-05 Score=76.57 Aligned_cols=51 Identities=10% Similarity=0.143 Sum_probs=42.2
Q ss_pred CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 329 RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 329 g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+.|..||+.+++.+..+. +..++....+++++.+++.++.|+.+++||+..
T Consensus 457 g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp EEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 789999999999988775 444556666778888999999999999999854
No 221
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.44 E-value=0.00016 Score=71.64 Aligned_cols=81 Identities=11% Similarity=0.134 Sum_probs=51.8
Q ss_pred CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccc-cceeEEEEeCCC
Q 016769 283 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH-ATCNAVSFSSDC 361 (383)
Q Consensus 283 ~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~v~~spd~ 361 (383)
+.|..||+.+. +...+.... ....+..+...+..++.++.||.+++||..+++.+..+.-.. ..-.-+.|.++|
T Consensus 457 g~l~A~D~~tG--~~~W~~~~~---~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G 531 (677)
T 1kb0_A 457 GRLLAWDPVAQ--KAAWSVEHV---SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDG 531 (677)
T ss_dssp EEEEEEETTTT--EEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred cEEEEEeCCCC--cEEeecCCC---CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCC
Confidence 67888888643 333332221 122333455667788889999999999999999998776332 222334567899
Q ss_pred C-EEEEEe
Q 016769 362 K-LMASAS 368 (383)
Q Consensus 362 ~-~las~s 368 (383)
+ +++..+
T Consensus 532 ~~~v~~~~ 539 (677)
T 1kb0_A 532 RQYVSVAV 539 (677)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 8 444433
No 222
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.44 E-value=0.00018 Score=62.84 Aligned_cols=140 Identities=6% Similarity=-0.068 Sum_probs=93.1
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
.++...++.|..+|.. .......+......+..+.+++++...++...++.|..+|.+ . .... .........+.+
T Consensus 118 ~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g--~~~~-~~~~~~~~~~~~ 192 (300)
T 2qc5_A 118 WFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT-G--KLEE-YPLPTNAAAPVG 192 (300)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-C--CEEE-EECSSTTCCEEE
T ss_pred EEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC-C--cEEE-eeCCCCCCCcce
Confidence 4455557889999876 332111122234567889999888744444446788888863 2 2211 112222346889
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCCCceEE-EecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALA-ILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+++.++++..++....+.|.+||. +++... ....+...+.++++.|+|++.++...++.|..||.
T Consensus 193 i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 193 ITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp EEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred EEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 999999988777767788999998 554433 23334567889999999998887777788988876
No 223
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.42 E-value=1.7e-05 Score=70.12 Aligned_cols=142 Identities=11% Similarity=0.140 Sum_probs=90.2
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
+++...++.|..||..+... ..+. ....+.++.+++++. ++.+. ++.|.+||.+..................++.
T Consensus 28 ~~~d~~~~~i~~~d~~~~~~--~~~~-~~~~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~d 102 (297)
T 3g4e_A 28 LFVDIPAKKVCRWDSFTKQV--QRVT-MDAPVSSVALRQSGG-YVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFND 102 (297)
T ss_dssp EEEETTTTEEEEEETTTCCE--EEEE-CSSCEEEEEEBTTSS-EEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEE
T ss_pred EEEECCCCEEEEEECCCCcE--EEEe-CCCceEEEEECCCCC-EEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCC
Confidence 45666788999999876432 2222 245788999999887 44444 6779999886432211111100111235788
Q ss_pred EEECCCCcEEEEEeCC---------CcEEEEEcCCCceEEEecccccceeEEEEeCCCCEE-EEEeCCCcEEEEeCC
Q 016769 313 TSIRPDSKIAATAGWD---------RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASASEDSTVALWELY 379 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~l-as~s~d~~i~~w~~~ 379 (383)
++++|+|+++++...+ ..-.+|.++.......+..+....+.++|+||++.| ++.+.++.|.+|++.
T Consensus 103 i~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 103 GKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp EEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred EEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence 9999999976654322 334566665333333333445567899999999854 677778999999874
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.40 E-value=0.00012 Score=72.49 Aligned_cols=82 Identities=13% Similarity=0.146 Sum_probs=52.9
Q ss_pred CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccccc-ceeEEEEeCCC
Q 016769 283 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA-TCNAVSFSSDC 361 (383)
Q Consensus 283 ~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~-~v~~v~~spd~ 361 (383)
+.|..||+.+. +...+..... ....-.+...+..++.++.||.++.||.++++.+..++.... ...-+.|..||
T Consensus 455 g~l~A~D~~tG--~~~W~~~~~~---~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G 529 (689)
T 1yiq_A 455 GKLIAWDPVKQ--QAAWEVPYVT---IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDG 529 (689)
T ss_dssp EEEEEEETTTT--EEEEEEEESS---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred eeEEEEECCCC--CeEeEccCCC---CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECC
Confidence 67888988644 3333322211 122224445677888899999999999999999987764322 22335678899
Q ss_pred C-EEEEEeC
Q 016769 362 K-LMASASE 369 (383)
Q Consensus 362 ~-~las~s~ 369 (383)
+ +++..+.
T Consensus 530 ~qyv~~~~G 538 (689)
T 1yiq_A 530 EQYVTFMAG 538 (689)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 8 5555443
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.39 E-value=0.00016 Score=71.71 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=41.8
Q ss_pred CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+|+|+.||+.+++.+..+..+. +...-.++..+.+++.|+.|+.++.||...
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCC
Confidence 4789999999999988776443 344446677888999999999999999854
No 226
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.37 E-value=3.9e-05 Score=67.80 Aligned_cols=139 Identities=14% Similarity=0.105 Sum_probs=87.6
Q ss_pred EEEEeCCCcEEEEeCCCCCCceee-ee----ccccCeEEEEEeCCCCceEEEEcC---------------CcEEEEEccC
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTA-MK----VHLEPVLCLSIDESCNGGISGGAD---------------QKIVLYNLDH 292 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~-~~----~h~~~v~~~~~~~~~~~~~s~~~d---------------~~i~~wdl~~ 292 (383)
+..+...+.|.+||.. ... ... .. .....+..+.+++++...++...+ +.|..||.+
T Consensus 85 l~v~~~~~~l~~~d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 85 LFVADMRLGLLVVQTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp EEEEETTTEEEEEETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred EEEEECCCCEEEEeCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence 4445545579999987 332 211 11 112357889999988755554444 345555543
Q ss_pred CCCeeEEeeeeecCCCCeEEEEEC----CCCcEEEEE-eCCCcEEEEEcC-CCc-----eEEEecccc-cceeEEEEeCC
Q 016769 293 STGSCVIKKEINLERPGISGTSIR----PDSKIAATA-GWDRRVRIYNYR-KGS-----ALAILKYHH-ATCNAVSFSSD 360 (383)
Q Consensus 293 ~~~~~~~~~~~~~~~~~i~~~~~~----p~~~~l~s~-~~dg~i~iwd~~-~~~-----~~~~~~~h~-~~v~~v~~spd 360 (383)
+..... . ........++++ |+++.+..+ ..++.|.+||+. +++ ....+..+. ..+..++++++
T Consensus 162 --g~~~~~--~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~ 236 (314)
T 1pjx_A 162 --GQMIQV--D-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDED 236 (314)
T ss_dssp --SCEEEE--E-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTT
T ss_pred --CCEEEe--c-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCC
Confidence 222111 1 111346788999 999755444 568999999986 443 223333443 56788999999
Q ss_pred CCEEEEEeCCCcEEEEeCC
Q 016769 361 CKLMASASEDSTVALWELY 379 (383)
Q Consensus 361 ~~~las~s~d~~i~~w~~~ 379 (383)
|+++++...++.|.+||..
T Consensus 237 G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 237 NNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp CCEEEEEETTTEEEEECTT
T ss_pred CCEEEEEcCCCEEEEEcCC
Confidence 9999988889999999864
No 227
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.37 E-value=0.00013 Score=67.61 Aligned_cols=74 Identities=14% Similarity=0.186 Sum_probs=53.4
Q ss_pred EEEeCCCCceEEEEc----------CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCc-EEEEEeC-CCcEEEE
Q 016769 267 LSIDESCNGGISGGA----------DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK-IAATAGW-DRRVRIY 334 (383)
Q Consensus 267 ~~~~~~~~~~~s~~~----------d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~s~~~-dg~i~iw 334 (383)
+.+++++..++.... ++.|.++|+..... .. .+... ....+++|+||++ +++++.+ +++|.++
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv--v~--~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER--IN--KIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIY 398 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EE--EEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE--EE--EEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEE
Confidence 678888776655432 34688888865432 21 12111 2477899999999 8888884 9999999
Q ss_pred EcCCCceEEEe
Q 016769 335 NYRKGSALAIL 345 (383)
Q Consensus 335 d~~~~~~~~~~ 345 (383)
|+.+++.+.++
T Consensus 399 D~~t~kvv~tI 409 (426)
T 3c75_H 399 DAATGEELRSV 409 (426)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCCEEEEe
Confidence 99999999886
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.36 E-value=0.0016 Score=60.05 Aligned_cols=128 Identities=20% Similarity=0.238 Sum_probs=80.9
Q ss_pred CCCcEEEEeCCCCCCceeeeecc--ccCeEEEEE--eCCCCceEEEE------cCCcEEEEEccCCCCeeEEeeee--ec
Q 016769 238 EDGSILVWDIRNPGIPLTAMKVH--LEPVLCLSI--DESCNGGISGG------ADQKIVLYNLDHSTGSCVIKKEI--NL 305 (383)
Q Consensus 238 ~dg~i~~wdl~~~~~~~~~~~~h--~~~v~~~~~--~~~~~~~~s~~------~d~~i~~wdl~~~~~~~~~~~~~--~~ 305 (383)
.+.+|.+||+.+ ...+.++... ......+.| ++++..++.++ .+++|.+|..+. +.....+.+ ..
T Consensus 226 ~~d~V~v~D~~~-~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~--g~~~~~~vIdi~~ 302 (462)
T 2ece_A 226 YGNRIHFWDLRK-RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED--GKWNAEKVIEIPA 302 (462)
T ss_dssp SCCEEEEEETTT-TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET--TEEEEEEEEEECC
T ss_pred cCCEEEEEECCC-CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC--CceeEEEEEeCCC
Confidence 478999999987 3444555432 122334445 99888776655 566888777664 222222211 00
Q ss_pred ---C-------------CCCeEEEEECCCCcEEEEEeC-CCcEEEEEcCC---CceEEEeccc-----------c---cc
Q 016769 306 ---E-------------RPGISGTSIRPDSKIAATAGW-DRRVRIYNYRK---GSALAILKYH-----------H---AT 351 (383)
Q Consensus 306 ---~-------------~~~i~~~~~~p~~~~l~s~~~-dg~i~iwd~~~---~~~~~~~~~h-----------~---~~ 351 (383)
. ......+.++||+++|.++.+ .+.|.+||+.. .+.+..+.-. . ..
T Consensus 303 ~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~gg 382 (462)
T 2ece_A 303 EPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGA 382 (462)
T ss_dssp EECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSC
T ss_pred ccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCC
Confidence 0 234678999999998887775 78999999853 3444433211 0 12
Q ss_pred eeEEEEeCCCCEEEEEe
Q 016769 352 CNAVSFSSDCKLMASAS 368 (383)
Q Consensus 352 v~~v~~spd~~~las~s 368 (383)
...++++|||++|..+.
T Consensus 383 Pr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 383 PQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSSEEEEEC
T ss_pred CCEEEEcCCCCEEEEEc
Confidence 46788999999888887
No 229
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.34 E-value=1.6e-05 Score=70.43 Aligned_cols=142 Identities=10% Similarity=0.007 Sum_probs=90.9
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.++++..++.|..|+.. +. ...+..+...+..+.+++++..+++...++.|.+|+.+ .+...............++
T Consensus 59 l~~~d~~~~~i~~~~~~-g~--~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~ 134 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRED-GT--VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPN 134 (305)
T ss_dssp EEEEETTTTEEEEEETT-SC--EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCC
T ss_pred EEEEECCCCEEEEEeCC-CC--EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCC
Confidence 35667788999999873 22 34444455678889999988744433345789999875 2211111111111123467
Q ss_pred EEEECCCCcEEEE----EeC-------------CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCC----
Q 016769 312 GTSIRPDSKIAAT----AGW-------------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED---- 370 (383)
Q Consensus 312 ~~~~~p~~~~l~s----~~~-------------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d---- 370 (383)
.+++.|+|++.++ |.. .+.|..||..+++..... .....+.++|+||++.|..+..+
T Consensus 135 ~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~ 212 (305)
T 3dr2_A 135 DLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGH 212 (305)
T ss_dssp CEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---
T ss_pred CEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCC
Confidence 8999999998876 332 246777777666644332 44567889999999977666554
Q ss_pred --CcEEEEeCC
Q 016769 371 --STVALWELY 379 (383)
Q Consensus 371 --~~i~~w~~~ 379 (383)
+.|.+|++.
T Consensus 213 ~~~~i~~~~~~ 223 (305)
T 3dr2_A 213 GSVEITAFAWR 223 (305)
T ss_dssp CCCEEEEEEEE
T ss_pred CCCEEEEEEec
Confidence 689988864
No 230
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.29 E-value=5.3e-05 Score=75.33 Aligned_cols=191 Identities=7% Similarity=0.038 Sum_probs=105.7
Q ss_pred ccCCCCCceeee---ccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCC-
Q 016769 164 DVPAEGPKYMAV---AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED- 239 (383)
Q Consensus 164 ~~~~~~~~~~~~---~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~d- 239 (383)
.++++|+.++.+ .|+...+|++||+++++.+..........++..+ ++. .++.+..+
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~------------------~l~y~~~~~ 195 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNE------------------GFFYSSYDK 195 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTT------------------EEEEEESSC
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCC------------------EEEEEEecC
Confidence 356777643322 3444468999999998854322111101111222 111 23333333
Q ss_pred ------------CcEEEEeCCCCCC-ceeee--ec-cccCeEEEEEeCCCCceEEE-E---cCCcEEEEEccCCCCeeEE
Q 016769 240 ------------GSILVWDIRNPGI-PLTAM--KV-HLEPVLCLSIDESCNGGISG-G---ADQKIVLYNLDHSTGSCVI 299 (383)
Q Consensus 240 ------------g~i~~wdl~~~~~-~~~~~--~~-h~~~v~~~~~~~~~~~~~s~-~---~d~~i~~wdl~~~~~~~~~ 299 (383)
..|++|++.++.. ..... .. |...+..+.+++++..++.. + ..+.|.++|++.......
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~- 274 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL- 274 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE-
T ss_pred cccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE-
Confidence 4599999976532 11222 22 33346778899999876433 2 235789999876542221
Q ss_pred eeeeecCCCCeEEEEECCCCcEEE-EEeCC---CcEEEEEcCCCce--EEEecccccceeEEEEeCCCCEEEEEeCCC--
Q 016769 300 KKEINLERPGISGTSIRPDSKIAA-TAGWD---RRVRIYNYRKGSA--LAILKYHHATCNAVSFSSDCKLMASASEDS-- 371 (383)
Q Consensus 300 ~~~~~~~~~~i~~~~~~p~~~~l~-s~~~d---g~i~iwd~~~~~~--~~~~~~h~~~v~~v~~spd~~~las~s~d~-- 371 (383)
.+.......... ++++++.|+ .+..+ ++|..+|+.++.. ...+..|...+. .|+|++++|+....++
T Consensus 275 --~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~ 349 (693)
T 3iuj_A 275 --TVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDAT 349 (693)
T ss_dssp --EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTE
T ss_pred --EEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCe
Confidence 111222223333 555655444 44333 6799999987654 234555666665 8999999877666544
Q ss_pred -cEEEEeCC
Q 016769 372 -TVALWELY 379 (383)
Q Consensus 372 -~i~~w~~~ 379 (383)
.|++|++.
T Consensus 350 ~~l~~~d~~ 358 (693)
T 3iuj_A 350 ARVEQFDYE 358 (693)
T ss_dssp EEEEEECTT
T ss_pred eEEEEEECC
Confidence 57788763
No 231
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.18 E-value=0.0007 Score=58.36 Aligned_cols=176 Identities=7% Similarity=-0.030 Sum_probs=109.5
Q ss_pred cceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeec
Q 016769 180 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV 259 (383)
Q Consensus 180 ~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~ 259 (383)
.+.|++.|+++++.+..+.-+. ..+...+. + . +....++.-.++.+.++|..+. ..+..+..
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~-----------~~fgeGi~-~--~---g~~lyv~t~~~~~v~viD~~t~-~v~~~i~~ 104 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDD-----------SYFGEGLT-L--L---NEKLYQVVWLKNIGFIYDRRTL-SNIKNFTH 104 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCT-----------TCCEEEEE-E--E---TTEEEEEETTCSEEEEEETTTT-EEEEEEEC
T ss_pred CCEEEEEECCCCCEEEEEecCC-----------CcceEEEE-E--e---CCEEEEEEecCCEEEEEECCCC-cEEEEEEC
Confidence 5789999999999776654211 00111111 1 1 1123345567889999998863 34555543
Q ss_pred c-ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec---CCCCeEEEEECCCCcEEEEEeCCCcEEEEE
Q 016769 260 H-LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL---ERPGISGTSIRPDSKIAATAGWDRRVRIYN 335 (383)
Q Consensus 260 h-~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~---~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd 335 (383)
. .+. ..++. ++..++.+..++.+.++|.+.......+ .... .....+.+.+. +++.++..-.++.|.+.|
T Consensus 105 g~~~g-~glt~--Dg~~l~vs~gs~~l~viD~~t~~v~~~I--~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID 178 (266)
T 2iwa_A 105 QMKDG-WGLAT--DGKILYGSDGTSILYEIDPHTFKLIKKH--NVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARIS 178 (266)
T ss_dssp CSSSC-CEEEE--CSSSEEEECSSSEEEEECTTTCCEEEEE--ECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEE
T ss_pred CCCCe-EEEEE--CCCEEEEECCCCeEEEEECCCCcEEEEE--EECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEE
Confidence 2 111 23444 4566666666788888887643321111 1111 11236677887 776555554688999999
Q ss_pred cCCCceEEEeccc---c----------cceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 336 YRKGSALAILKYH---H----------ATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 336 ~~~~~~~~~~~~h---~----------~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
..+++.+..+.-. . ...+.|+|+|+++ .++++.....|..-++.
T Consensus 179 ~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 179 AKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp TTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 9999988877521 0 2458999999987 77788888888887764
No 232
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.17 E-value=7.5e-05 Score=66.88 Aligned_cols=138 Identities=12% Similarity=-0.005 Sum_probs=86.5
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeee--cCCCC
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN--LERPG 309 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~--~~~~~ 309 (383)
.++++..++.|..||..+.. ...+. ....+.++.+++++..++ ++ +..|.+||.+....... .... .....
T Consensus 63 l~~~d~~~~~i~~~d~~~~~--~~~~~-~~~~v~~i~~~~dg~l~v-~~-~~gl~~~d~~~g~~~~~--~~~~~~~~~~~ 135 (326)
T 2ghs_A 63 AWWFNILERELHELHLASGR--KTVHA-LPFMGSALAKISDSKQLI-AS-DDGLFLRDTATGVLTLH--AELESDLPGNR 135 (326)
T ss_dssp EEEEEGGGTEEEEEETTTTE--EEEEE-CSSCEEEEEEEETTEEEE-EE-TTEEEEEETTTCCEEEE--ECSSTTCTTEE
T ss_pred EEEEECCCCEEEEEECCCCc--EEEEE-CCCcceEEEEeCCCeEEE-EE-CCCEEEEECCCCcEEEE--eeCCCCCCCCC
Confidence 35566678899999987632 22222 235688899988876544 44 44588898764432111 1111 11235
Q ss_pred eEEEEECCCCcEEEEEeC------CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEE-EEEeCCCcEEEEeCC
Q 016769 310 ISGTSIRPDSKIAATAGW------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASASEDSTVALWELY 379 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~l-as~s~d~~i~~w~~~ 379 (383)
++.++++|+|+++++... .+.|..+| +++ +..+..+....+.++|+||++.| ++.+.++.|.+|++.
T Consensus 136 ~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 136 SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK-VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE-EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc-EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 789999999997765542 24455555 444 33333344457889999999865 555667899999974
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.14 E-value=0.00036 Score=63.44 Aligned_cols=87 Identities=7% Similarity=-0.006 Sum_probs=59.6
Q ss_pred EEEeCCCCceEEEEc---------CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCc-EEEEEe-CCCcEEEEE
Q 016769 267 LSIDESCNGGISGGA---------DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK-IAATAG-WDRRVRIYN 335 (383)
Q Consensus 267 ~~~~~~~~~~~s~~~---------d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~s~~-~dg~i~iwd 335 (383)
+.+++++..++.+.. ++.+.++|+..... . ..+... ....+++|+||++ .+++.. .+++|.++|
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v--v--~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT--S--GPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE--E--ECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE--E--EEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 678888887765432 23566999875432 1 122221 2478899999997 566666 599999999
Q ss_pred cCCCceEEEecccccceeEEEEeC
Q 016769 336 YRKGSALAILKYHHATCNAVSFSS 359 (383)
Q Consensus 336 ~~~~~~~~~~~~h~~~v~~v~~sp 359 (383)
+.+++.+.++.-... ...+++.+
T Consensus 344 ~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 344 AASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp SSSCEEEEECCCCSC-CCEEECCC
T ss_pred CCCCcEEEEEECCCC-CCEEEeec
Confidence 999999988864443 45666654
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.07 E-value=0.00017 Score=66.51 Aligned_cols=196 Identities=13% Similarity=0.148 Sum_probs=111.0
Q ss_pred CCceeeeccCCcceEEEEecCCC----CeeeEeccCcCCCCCCcCCCCCceeeEE-EeecCCCCCCceEEEEEeCC----
Q 016769 169 GPKYMAVAGEQLSEVEIWDLNTA----ERCTRLHQNSCGGSPNFSSKGRGMCMAV-QAYLPSKSQGFVNVLAGYED---- 239 (383)
Q Consensus 169 ~~~~~~~~g~~~~~i~~Wdl~~~----~~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~sg~~d---- 239 (383)
..+++.+.+..++.|.+.|+.+. +....+..... +. ..+..... ....|+ + .++++..+
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~-----~~--~~g~s~Ph~~~~~pd---G--i~Vs~~g~~~g~ 161 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEV-----KK--VSGYSRLHTVHCGPD---A--IYISALGNEEGE 161 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHH-----HH--HHCEEEEEEEEECSS---C--EEEEEEEETTSC
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhc-----cc--ccCCCcccceeECCC---e--EEEEcCCCcCCC
Confidence 34678888888889999999754 23333310000 00 00000000 001222 1 34444333
Q ss_pred --CcEEEEeCCCCCCceeeeeccccC---eEEEEEeCCCCceEEEE-------------------cCCcEEEEEccCCCC
Q 016769 240 --GSILVWDIRNPGIPLTAMKVHLEP---VLCLSIDESCNGGISGG-------------------ADQKIVLYNLDHSTG 295 (383)
Q Consensus 240 --g~i~~wdl~~~~~~~~~~~~h~~~---v~~~~~~~~~~~~~s~~-------------------~d~~i~~wdl~~~~~ 295 (383)
+.|.+.|.++.. .+........+ -..+-+++..+.+++.. .+.+|.+||++..
T Consensus 162 ~~g~v~vlD~~T~~-v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-- 238 (462)
T 2ece_A 162 GPGGILMLDHYSFE-PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-- 238 (462)
T ss_dssp SCCEEEEECTTTCC-EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT--
T ss_pred CCCeEEEEECCCCe-EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC--
Confidence 789999988643 34444322111 12355688888766664 3788999999853
Q ss_pred eeEEeeeeecC--CCCeEEEEE--CCCCcEEEEEe------CCCcEEEEEcCCCce--EEE--eccc-------------
Q 016769 296 SCVIKKEINLE--RPGISGTSI--RPDSKIAATAG------WDRRVRIYNYRKGSA--LAI--LKYH------------- 348 (383)
Q Consensus 296 ~~~~~~~~~~~--~~~i~~~~~--~p~~~~l~s~~------~dg~i~iwd~~~~~~--~~~--~~~h------------- 348 (383)
+.. ..+... ......+.| +|+++++..++ .+++|.+|..+.++. ... +...
T Consensus 239 k~~--~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f 316 (462)
T 2ece_A 239 KRI--HSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPF 316 (462)
T ss_dssp EEE--EEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGG
T ss_pred cEe--eEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccccc
Confidence 222 223322 123445555 99999877776 567888776654421 111 1110
Q ss_pred ---ccceeEEEEeCCCCEE-EEEeCCCcEEEEeCCCC
Q 016769 349 ---HATCNAVSFSSDCKLM-ASASEDSTVALWELYPP 381 (383)
Q Consensus 349 ---~~~v~~v~~spd~~~l-as~s~d~~i~~w~~~~~ 381 (383)
......+.+||||++| ++.-..+.|.+||+.+|
T Consensus 317 ~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 317 KAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp TEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSST
T ss_pred ccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 2346788999999955 55555789999999755
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.92 E-value=0.0045 Score=54.71 Aligned_cols=134 Identities=10% Similarity=-0.022 Sum_probs=83.6
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
+..++ +.|..+| .++. .+-........+.++..++++ .+..++.++.+..+|.+ +...... ......+..
T Consensus 190 l~v~t--~~l~~~d-~~g~-~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~~gl~~~~~~---g~~~~~~--~~~~~~~~~ 259 (330)
T 3hxj_A 190 IYFGS--DKVYAIN-PDGT-EKWNFYAGYWTVTRPAISEDG-TIYVTSLDGHLYAINPD---GTEKWRF--KTGKRIESS 259 (330)
T ss_dssp EEEES--SSEEEEC-TTSC-EEEEECCSSCCCSCCEECTTS-CEEEEETTTEEEEECTT---SCEEEEE--ECSSCCCSC
T ss_pred EEEEe--CEEEEEC-CCCc-EEEEEccCCcceeceEECCCC-eEEEEcCCCeEEEECCC---CCEeEEe--eCCCCcccc
Confidence 45555 7888898 4432 232333333456677777765 45667778888888632 2222221 122222344
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+.+.+++. |..++.++.|..+|. +++.+..+......+.++...++|++ ..|+.+|.+++....
T Consensus 260 ~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l-~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 260 PVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTI-YFGTRNGKFYALFNL 323 (330)
T ss_dssp CEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCE-EEECTTSCEEEEEC-
T ss_pred ceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEE-EEEcCCCeEEEEecc
Confidence 55665664 556788889999996 67777666545556777777788765 458899999998764
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.90 E-value=0.002 Score=54.96 Aligned_cols=164 Identities=14% Similarity=0.146 Sum_probs=96.3
Q ss_pred ceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeecc
Q 016769 181 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH 260 (383)
Q Consensus 181 ~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h 260 (383)
+.|+..|+++++.+.++.-+. ..+...+.. . +....+..-.++.+.++|.++. ..+..+...
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~-----------~~FgeGit~---~---g~~ly~ltw~~~~v~v~D~~t~-~~~~ti~~~ 126 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGK-----------RYFGEGISD---W---KDKIVGLTWKNGLGFVWNIRNL-RQVRSFNYD 126 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCT-----------TCCEEEEEE---E---TTEEEEEESSSSEEEEEETTTC-CEEEEEECS
T ss_pred ceEEEEECCCCcEEEEEecCC-----------ccceeEEEE---e---CCEEEEEEeeCCEEEEEECccC-cEEEEEECC
Confidence 489999999999877664211 111111111 1 1122334556889999998874 345556543
Q ss_pred ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeec---CCCCeEEEEECCCCcEEEEEeCCCcEEEEEcC
Q 016769 261 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL---ERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 261 ~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~---~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~ 337 (383)
.+. ..++. ++..++.+..++.|.++|...... ........ .-..++.+.+. +|+..+..-.+..|.+.|..
T Consensus 127 ~eG-~glt~--dg~~L~~SdGs~~i~~iDp~T~~v--~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~ 200 (262)
T 3nol_A 127 GEG-WGLTH--NDQYLIMSDGTPVLRFLDPESLTP--VRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPE 200 (262)
T ss_dssp SCC-CCEEE--CSSCEEECCSSSEEEEECTTTCSE--EEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTT
T ss_pred CCc-eEEec--CCCEEEEECCCCeEEEEcCCCCeE--EEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECC
Confidence 222 23333 345565555567788877654332 21111111 11335567775 67655554468899999999
Q ss_pred CCceEEEeccc------------ccceeEEEEeCCCCEEEEEe
Q 016769 338 KGSALAILKYH------------HATCNAVSFSSDCKLMASAS 368 (383)
Q Consensus 338 ~~~~~~~~~~h------------~~~v~~v~~spd~~~las~s 368 (383)
+++.+..+.-. ..-.+.|||+|+++.|...+
T Consensus 201 tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 201 TGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 99988766531 12458999999988555444
No 237
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.90 E-value=0.0027 Score=62.53 Aligned_cols=58 Identities=12% Similarity=0.083 Sum_probs=37.9
Q ss_pred EEEECCCCcEEEEEeCC-----------CcEEEEEcCCCceEE--EecccccceeEEEEeCCCCEEEEEeC
Q 016769 312 GTSIRPDSKIAATAGWD-----------RRVRIYNYRKGSALA--ILKYHHATCNAVSFSSDCKLMASASE 369 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~d-----------g~i~iwd~~~~~~~~--~~~~h~~~v~~v~~spd~~~las~s~ 369 (383)
+..+.|+++.++.|+.+ ..+.+||..+.+-.. .+......-.+..+.|||++++.|+.
T Consensus 460 ~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 460 TSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 44567899999999865 568999997754221 11111112223446799999999985
No 238
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.79 E-value=0.0033 Score=53.76 Aligned_cols=170 Identities=10% Similarity=0.045 Sum_probs=100.6
Q ss_pred eeeccCCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCC
Q 016769 173 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 252 (383)
Q Consensus 173 ~~~~g~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~ 252 (383)
+..+.+.++.|+..|+++++.+.++ -+. ..+...+. + . .+. ..+..-.++.+.+||.++. .
T Consensus 67 Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-----------~~FgeGit-~--~--g~~-Ly~ltw~~~~v~V~D~~Tl-~ 127 (268)
T 3nok_A 67 FFESTGHQGTLRQLSLESAQPVWME-RLG-----------NIFAEGLA-S--D--GER-LYQLTWTEGLLFTWSGMPP-Q 127 (268)
T ss_dssp EEEEETTTTEEEECCSSCSSCSEEE-ECT-----------TCCEEEEE-E--C--SSC-EEEEESSSCEEEEEETTTT-E
T ss_pred EEEEcCCCCEEEEEECCCCcEEeEE-CCC-----------CcceeEEE-E--e--CCE-EEEEEccCCEEEEEECCcC-c
Confidence 3444455677999999999976655 211 11111111 1 1 112 2344567899999998873 4
Q ss_pred ceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecC---CCCeEEEEECCCCcEEEEEeCCC
Q 016769 253 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE---RPGISGTSIRPDSKIAATAGWDR 329 (383)
Q Consensus 253 ~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~---~~~i~~~~~~p~~~~l~s~~~dg 329 (383)
.+..+....+. ..++.+ +..++.+..++.|.++|.+.... ......... -..++.+.+. +|+..+..-.+.
T Consensus 128 ~~~ti~~~~eG-wGLt~D--g~~L~vSdGs~~l~~iDp~T~~v--~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~ 201 (268)
T 3nok_A 128 RERTTRYSGEG-WGLCYW--NGKLVRSDGGTMLTFHEPDGFAL--VGAVQVKLRGQPVELINELECA-NGVIYANIWHSS 201 (268)
T ss_dssp EEEEEECSSCC-CCEEEE--TTEEEEECSSSEEEEECTTTCCE--EEEEECEETTEECCCEEEEEEE-TTEEEEEETTCS
T ss_pred EEEEEeCCCce-eEEecC--CCEEEEECCCCEEEEEcCCCCeE--EEEEEeCCCCcccccccccEEe-CCEEEEEECCCC
Confidence 45555543222 344444 45666666678888887654432 211111111 1235666666 776555444588
Q ss_pred cEEEEEcCCCceEEEeccc-------------ccceeEEEEeCCCC-EEEEE
Q 016769 330 RVRIYNYRKGSALAILKYH-------------HATCNAVSFSSDCK-LMASA 367 (383)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~h-------------~~~v~~v~~spd~~-~las~ 367 (383)
.|.+.|..+++.+..+.-. ..-.+.||++|+++ +++||
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 9999999999988766522 12468999999876 55555
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.75 E-value=0.0061 Score=53.85 Aligned_cols=133 Identities=14% Similarity=0.037 Sum_probs=82.4
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
+..++.++.|..+|.. +. .+.........+..+.++.++. +..++ +.+..+| . ++...... ......+.+
T Consensus 150 l~vgt~~~~l~~~d~~-g~-~~~~~~~~~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~--~g~~~~~~--~~~~~~~~~ 219 (330)
T 3hxj_A 150 IYVGSNDNYLYAINPD-GT-EKWRFKTNDAITSAASIGKDGT-IYFGS--DKVYAIN-P--DGTEKWNF--YAGYWTVTR 219 (330)
T ss_dssp EEEECTTSEEEEECTT-SC-EEEEEECSSCCCSCCEECTTCC-EEEES--SSEEEEC-T--TSCEEEEE--CCSSCCCSC
T ss_pred EEEEcCCCEEEEECCC-CC-EeEEEecCCCceeeeEEcCCCE-EEEEe--CEEEEEC-C--CCcEEEEE--ccCCcceec
Confidence 6678888999999977 33 2333333344555666766655 44444 7788887 3 22222222 222345777
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+.+.+++.. ..++.++.+..+|. +++.+..+......+.++.+.++++ |..++.++.|..+|.
T Consensus 220 ~~~~~~g~l-~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 220 PAISEDGTI-YVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP 282 (330)
T ss_dssp CEECTTSCE-EEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred eEECCCCeE-EEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence 888888764 45677888888874 5666665554444445556665664 556777878888874
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.75 E-value=0.0034 Score=61.99 Aligned_cols=53 Identities=11% Similarity=0.083 Sum_probs=40.6
Q ss_pred CCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 327 WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.+|.|..||+.+++.+.....+ .......+...+.+++.|+.|+.++.||...
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhc
Confidence 3588999999999998776533 3344345556778899999999999999753
No 241
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.61 E-value=0.024 Score=47.86 Aligned_cols=163 Identities=12% Similarity=0.102 Sum_probs=95.9
Q ss_pred ceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCceeeeecc
Q 016769 181 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH 260 (383)
Q Consensus 181 ~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~~~~~~h 260 (383)
+.|+..|+++++.+.++.-+. ..+-..+. .. .+. ..+..-.++.+.++|.++ ...+..+...
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~-----------~~fgeGi~-~~----~~~-ly~ltw~~~~v~v~D~~t-l~~~~ti~~~ 104 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPP-----------PYFGAGIV-AW----RDR-LIQLTWRNHEGFVYDLAT-LTPRARFRYP 104 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCT-----------TCCEEEEE-EE----TTE-EEEEESSSSEEEEEETTT-TEEEEEEECS
T ss_pred ceEEEEECCCCCEEEEEeCCC-----------CcceeEEE-Ee----CCE-EEEEEeeCCEEEEEECCc-CcEEEEEeCC
Confidence 589999999999877664211 11111111 11 112 233456789999999887 3345555543
Q ss_pred ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecC---CCCeEEEEECCCCcEEEEEeCCCcEEEEEcC
Q 016769 261 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE---RPGISGTSIRPDSKIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 261 ~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~---~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~ 337 (383)
.+. ..++. ++..++.+..++.|.++|.+.......+ ..... -..++.+.+. +|+.++..-.+..|.+.|..
T Consensus 105 ~~G-wglt~--dg~~L~vSdgs~~l~~iDp~t~~~~~~I--~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~ 178 (243)
T 3mbr_X 105 GEG-WALTS--DDSHLYMSDGTAVIRKLDPDTLQQVGSI--KVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPA 178 (243)
T ss_dssp SCC-CEEEE--CSSCEEEECSSSEEEEECTTTCCEEEEE--ECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTT
T ss_pred CCc-eEEee--CCCEEEEECCCCeEEEEeCCCCeEEEEE--EEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECC
Confidence 332 34444 4455666666778888876644322111 11111 1234555654 66655544458899999999
Q ss_pred CCceEEEeccc------------c-cceeEEEEeCCCCE-EEEE
Q 016769 338 KGSALAILKYH------------H-ATCNAVSFSSDCKL-MASA 367 (383)
Q Consensus 338 ~~~~~~~~~~h------------~-~~v~~v~~spd~~~-las~ 367 (383)
+++.+..+.-. . .-.+.||++|+++. ++||
T Consensus 179 tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 179 SGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 99988776521 1 24589999998774 4554
No 242
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.60 E-value=0.0012 Score=59.38 Aligned_cols=116 Identities=10% Similarity=0.083 Sum_probs=73.8
Q ss_pred cccCeEEEEEeCCCCceEEEEc-----CCcEEEEEccCCCCeeEEeeeee----cCCCCeEEEEECCCCc-EEEEEe---
Q 016769 260 HLEPVLCLSIDESCNGGISGGA-----DQKIVLYNLDHSTGSCVIKKEIN----LERPGISGTSIRPDSK-IAATAG--- 326 (383)
Q Consensus 260 h~~~v~~~~~~~~~~~~~s~~~-----d~~i~~wdl~~~~~~~~~~~~~~----~~~~~i~~~~~~p~~~-~l~s~~--- 326 (383)
|...+..+.+++++...++-.. ++.|.+||++... ........ ......+.++++|++. .+++..
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 4457788999888653333222 5789999986432 21111111 1123468899998654 445544
Q ss_pred CCCcEEEEEcCCCceEEEecccc-----------------------------cceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 327 WDRRVRIYNYRKGSALAILKYHH-----------------------------ATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~~~h~-----------------------------~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
.++.|.+||+.+++....+.+|. ..++.++|+|||+.|..+..++. ++|.
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~ 221 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYR 221 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEE
Confidence 68899999998887665554431 13588999999998887776663 4554
Q ss_pred C
Q 016769 378 L 378 (383)
Q Consensus 378 ~ 378 (383)
+
T Consensus 222 ~ 222 (343)
T 2qe8_A 222 I 222 (343)
T ss_dssp E
T ss_pred E
Confidence 3
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.39 E-value=0.047 Score=46.71 Aligned_cols=141 Identities=11% Similarity=0.077 Sum_probs=87.9
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.++...++.|..+|+.... ....+.........+++++.+..++.+ ...+.|.+++++....... .........
T Consensus 51 y~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~----~~~~~~~P~ 125 (267)
T 1npe_A 51 YWTDISEPSIGRASLHGGE-PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL----FDTGLVNPR 125 (267)
T ss_dssp EEEETTTTEEEEEESSSCC-CEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE----ECSSCSSEE
T ss_pred EEEECCCCEEEEEecCCCC-cEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE----EECCCCCcc
Confidence 4455667889999986532 222222223456789999876555544 4567899998874332211 111224678
Q ss_pred EEEECCCCcEEEEEeC---CCcEEEEEcCCCceEEEe-cccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 312 GTSIRPDSKIAATAGW---DRRVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~---dg~i~iwd~~~~~~~~~~-~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
.++++|++..|..+.. .++|..++++... ...+ .........++++|+++ ++++-...+.|..+|+.
T Consensus 126 ~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp EEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 9999996555444443 3689888886432 2222 22334678899999876 55666677889988874
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.29 E-value=0.0045 Score=59.16 Aligned_cols=128 Identities=10% Similarity=0.051 Sum_probs=81.1
Q ss_pred CcEEEEeCCC--CCCceeeeeccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCC----e----eEEeeeeecCCC
Q 016769 240 GSILVWDIRN--PGIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTG----S----CVIKKEINLERP 308 (383)
Q Consensus 240 g~i~~wdl~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~----~----~~~~~~~~~~~~ 308 (383)
+.|.+.|.++ ....+..+.... ...++.++|++++++.++ .+.+|.++|++.... . .....+.. -..
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~-~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~ 331 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIAN-NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGL 331 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEES-SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCS
T ss_pred CcEEEEeCcccCCceeEEEEecCC-CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCC
Confidence 4588899876 332233443322 335788999999876554 678899999874210 0 00111222 124
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCC----------CceEEEecccccc-----eeEEEEeCCCCEEEEEeC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRK----------GSALAILKYHHAT-----CNAVSFSSDCKLMASASE 369 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~h~~~-----v~~v~~spd~~~las~s~ 369 (383)
+...++|+|+|...++.-.|+.|..||+++ .+.+..+.-|-.+ -..+.++|||++|.++..
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 688999999996556666899999999976 4455555444332 122346899999888644
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.29 E-value=0.017 Score=51.17 Aligned_cols=144 Identities=10% Similarity=0.060 Sum_probs=86.1
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeec--------------------cccCeEEEEEeCCCCceEEEEcCCcEEEEEccC
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKV--------------------HLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 292 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~--------------------h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~ 292 (383)
+.++..++.|..||..... +..+.. .......+.+++....++.+...+.+..+|.+.
T Consensus 33 l~v~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~ 110 (322)
T 2fp8_A 33 FYTSVQDGRVIKYEGPNSG--FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEG 110 (322)
T ss_dssp EEEECTTSEEEEECCTTTC--EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEEECTTC
T ss_pred EEEEcCCCeEEEECCCCCc--eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEEEeCCC
Confidence 4566678888888876432 222110 112467888987334566666666687777543
Q ss_pred CCCeeEEeeeeecCCCCeEEEEECC-CCcEEEEEeC-----------------CCcEEEEEcCCCceEEEecccccceeE
Q 016769 293 STGSCVIKKEINLERPGISGTSIRP-DSKIAATAGW-----------------DRRVRIYNYRKGSALAILKYHHATCNA 354 (383)
Q Consensus 293 ~~~~~~~~~~~~~~~~~i~~~~~~p-~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~~h~~~v~~ 354 (383)
..................+.+++.| +|++.++... ++.|..||..+++...... .....+.
T Consensus 111 g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~g 189 (322)
T 2fp8_A 111 GHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGG 189 (322)
T ss_dssp EECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCE
T ss_pred CEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcc
Confidence 2111111100001113478899999 9987665432 3678888987665432222 2234577
Q ss_pred EEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 355 VSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 355 v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
++|+|||+ ++++-+.++.|..|++.
T Consensus 190 ia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 190 AEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred eEECCCCCEEEEEeCCCCeEEEEECC
Confidence 89999998 45555677889999875
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.19 E-value=0.039 Score=52.73 Aligned_cols=70 Identities=20% Similarity=0.219 Sum_probs=53.2
Q ss_pred CeEEEEECCCCcEEEEEe-CCCcEEEEEcCCCc------------eEEEecccccceeEEEEeCCCCEEEEEeCCCcEEE
Q 016769 309 GISGTSIRPDSKIAATAG-WDRRVRIYNYRKGS------------ALAILKYHHATCNAVSFSSDCKLMASASEDSTVAL 375 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~-~dg~i~iwd~~~~~------------~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~ 375 (383)
...++.++|||+++++++ .+.+|.++|+.+.+ ....+. -......++|+|||...++.-.|+.|.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVK 356 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEE
Confidence 456799999999766655 78899999998653 233332 2234688999999976778889999999
Q ss_pred EeCC
Q 016769 376 WELY 379 (383)
Q Consensus 376 w~~~ 379 (383)
||+.
T Consensus 357 wdi~ 360 (595)
T 1fwx_A 357 WNIE 360 (595)
T ss_dssp EEHH
T ss_pred EEhh
Confidence 9973
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.17 E-value=0.11 Score=45.75 Aligned_cols=110 Identities=11% Similarity=0.067 Sum_probs=72.0
Q ss_pred eEEEEEeCCCCceEEE-EcCCcEEEEEccCCC-CeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC----------CCcE
Q 016769 264 VLCLSIDESCNGGISG-GADQKIVLYNLDHST-GSCVIKKEINLERPGISGTSIRPDSKIAATAGW----------DRRV 331 (383)
Q Consensus 264 v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~-~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~----------dg~i 331 (383)
...+++++++..++.+ ...+.|.+++++... +..... .. ..+ ...+++.++|++.++... .+.|
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~--~~-~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v 262 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVL--VK-IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKG 262 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEE--EE-CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEE
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceE--Ee-CCC-CCCeEECCCCCEEEEecCcccccccCCCccEE
Confidence 4568899988766555 456889999987421 111111 11 112 788999999987666544 4678
Q ss_pred EEEEcCCCceEEEeccc----ccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 332 RIYNYRKGSALAILKYH----HATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 332 ~iwd~~~~~~~~~~~~h----~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
..+|. .++.+..+... ...+.++++ .+++++++...++.|..+++.
T Consensus 263 ~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 263 IKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred EEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 88887 47666655432 235677777 477777777788899999874
No 248
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.16 E-value=0.19 Score=48.36 Aligned_cols=52 Identities=12% Similarity=0.006 Sum_probs=37.4
Q ss_pred CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
++.|..||+.+++.+..+.. ...+.+..+...+..+..++.|+.++.||...
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKD 494 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred CCeEEEEECCCCCEEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCC
Confidence 57899999999998877652 22333333344566777799999999999754
No 249
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.00 E-value=0.28 Score=47.35 Aligned_cols=83 Identities=8% Similarity=0.118 Sum_probs=48.1
Q ss_pred CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccce-eEEEEeCC
Q 016769 282 DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC-NAVSFSSD 360 (383)
Q Consensus 282 d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~v~~spd 360 (383)
++.|.-||+.+. +...+...... ...-.+...+..++.++.|+.++.||.++++.+..++....-. .-+.+..|
T Consensus 465 ~G~l~A~D~~tG--~~~W~~~~~~~---~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~ 539 (582)
T 1flg_A 465 VGSLRAMDPVSG--KVVWEHKEHLP---LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQD 539 (582)
T ss_dssp SEEEEEECTTTC--CEEEEEEESSC---CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred cceEEEEECCCC--CEEEEecCCCC---CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEEC
Confidence 466777777643 33333222111 1111111134567779999999999999999998776432211 12556778
Q ss_pred CC-EEEEEeC
Q 016769 361 CK-LMASASE 369 (383)
Q Consensus 361 ~~-~las~s~ 369 (383)
|+ ++++.+.
T Consensus 540 G~qYv~~~~G 549 (582)
T 1flg_A 540 GEQYLGVTVG 549 (582)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEcc
Confidence 88 5554443
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.96 E-value=0.29 Score=47.07 Aligned_cols=84 Identities=14% Similarity=0.133 Sum_probs=47.3
Q ss_pred CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccccc-ceeEEEEeCC
Q 016769 282 DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA-TCNAVSFSSD 360 (383)
Q Consensus 282 d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~-~v~~v~~spd 360 (383)
++.+..||+.+. +...+..... .+.+..+...+..++.++.|+.++.||..+++.+..++.... .-.-+.+.++
T Consensus 443 ~g~l~a~D~~tG--~~~W~~~~~~---~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~ 517 (571)
T 2ad6_A 443 MGQIRAFDLTTG--KAKWTKWEKF---AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFK 517 (571)
T ss_dssp CEEEEEECTTTC--CEEEEEEESS---CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred CCeEEEEECCCC--CEEEEecCCC---CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEEC
Confidence 466777777643 3333322211 111112222345666689999999999999999987753221 1122345678
Q ss_pred CC-EEEEEeCC
Q 016769 361 CK-LMASASED 370 (383)
Q Consensus 361 ~~-~las~s~d 370 (383)
|+ ++++.+..
T Consensus 518 G~~yv~~~~G~ 528 (571)
T 2ad6_A 518 GKQYIGSMYGV 528 (571)
T ss_dssp TEEEEEEEECC
T ss_pred CEEEEEEECCC
Confidence 87 44444433
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.94 E-value=0.32 Score=47.10 Aligned_cols=51 Identities=10% Similarity=0.090 Sum_probs=34.8
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCceEEEecccccc-eeEEEEeCCCC-EEEEEe
Q 016769 318 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT-CNAVSFSSDCK-LMASAS 368 (383)
Q Consensus 318 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~v~~spd~~-~las~s 368 (383)
.+..+..++.|+.++.||.++++.+..++-.... ..-+.+..||+ ++++.+
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEEc
Confidence 3456667899999999999999999877532211 12244567887 555544
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.93 E-value=0.1 Score=44.51 Aligned_cols=136 Identities=6% Similarity=-0.104 Sum_probs=85.2
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeeccccC-eEEEEEeCCCCceEE-EEcCCcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEP-VLCLSIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~s-~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
..++.+.+|.|+.+|+++... +..+ ..... ...++++. +.++. .-.++.+.+||.++.... ..+.....
T Consensus 67 Ly~stG~~g~v~~iD~~Tgkv-~~~~-l~~~~FgeGit~~g--~~Ly~ltw~~~~v~V~D~~Tl~~~----~ti~~~~e- 137 (268)
T 3nok_A 67 FFESTGHQGTLRQLSLESAQP-VWME-RLGNIFAEGLASDG--ERLYQLTWTEGLLFTWSGMPPQRE----RTTRYSGE- 137 (268)
T ss_dssp EEEEETTTTEEEECCSSCSSC-SEEE-ECTTCCEEEEEECS--SCEEEEESSSCEEEEEETTTTEEE----EEEECSSC-
T ss_pred EEEEcCCCCEEEEEECCCCcE-EeEE-CCCCcceeEEEEeC--CEEEEEEccCCEEEEEECCcCcEE----EEEeCCCc-
Confidence 456778888999999998654 3333 22211 12355554 34433 345788999998754322 22222211
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecc--cc---cceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY--HH---ATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--h~---~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
-.+ +.+|++.|+.+..+++|.++|..+.+.+.++.- +. ..++.+.|. +|+..|....+..|.+-|..
T Consensus 138 GwG--Lt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 138 GWG--LCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp CCC--EEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTT
T ss_pred eeE--EecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCC
Confidence 122 335777777777799999999999888776542 22 245677877 88877777677788777753
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.91 E-value=0.19 Score=43.94 Aligned_cols=97 Identities=11% Similarity=0.029 Sum_probs=58.3
Q ss_pred eCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEE--Eec
Q 016769 270 DESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA--ILK 346 (383)
Q Consensus 270 ~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~ 346 (383)
++++..++.+ ...++|.+++++.. +......... .......+++.++|+++++....++|.+||.. ++... .+.
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~-g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~ 251 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDST-DKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAE 251 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTT-SCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGG
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCC-CCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecc
Confidence 3444444443 45677888888641 1110000010 11245678999999988877778899999975 65432 233
Q ss_pred ccccceeEEEEe---CCCCEEEEEeC
Q 016769 347 YHHATCNAVSFS---SDCKLMASASE 369 (383)
Q Consensus 347 ~h~~~v~~v~~s---pd~~~las~s~ 369 (383)
.......+++|. ||++.|..++.
T Consensus 252 ~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 252 QGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp GTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred cccCCceEEEEecccCCCCEEEEECC
Confidence 233568999998 89875554443
No 254
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.90 E-value=0.077 Score=49.17 Aligned_cols=141 Identities=8% Similarity=0.070 Sum_probs=85.2
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcC-C----cEEEEEccCCCCeeEEeeeeecCC
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD-Q----KIVLYNLDHSTGSCVIKKEINLER 307 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d-~----~i~~wdl~~~~~~~~~~~~~~~~~ 307 (383)
|......+.|+.+|+.... +..+.........++++++++.++.+... + .+...+.+. ..... ..+. ..
T Consensus 152 Lyv~d~~~~I~~id~~~~~--v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-~~~~~--~~l~-~~ 225 (430)
T 3tc9_A 152 LYLVGEQHPTRLIDFEKEY--VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-GFKVI--TELT-KG 225 (430)
T ss_dssp EEEEEBTEEEEEEETTTTE--EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-TSCSE--EEEE-EC
T ss_pred EEEEeCCCcEEEEECCCCE--EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-ceeee--eeec-cC
Confidence 4343333788899987532 23333334457789999998866655542 1 223333221 11100 0111 12
Q ss_pred CCeEEEEECC-CCcEEEEEeCCCcEEEEEcCCCceEEEec-ccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 308 PGISGTSIRP-DSKIAATAGWDRRVRIYNYRKGSALAILK-YHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 308 ~~i~~~~~~p-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
....+++++| ++.++++-..+++|+.|+...+....... +-......++|+|+|+ ++++-...+.|..++..
T Consensus 226 ~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 226 QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 3467889999 77777766678899999998765422111 1123467899999999 66777788889888753
No 255
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.89 E-value=0.2 Score=44.08 Aligned_cols=142 Identities=7% Similarity=-0.005 Sum_probs=84.1
Q ss_pred EEEEeCCCcEEEEeCCCC---CCceeeeeccccCeEEEEEeCCCCceEE-EEcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 233 VLAGYEDGSILVWDIRNP---GIPLTAMKVHLEPVLCLSIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~s-~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
.++-..++.|..+|+... ......+.........++++..+..++. -...+.|.+.+++....... ......
T Consensus 45 y~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~----~~~~~~ 120 (316)
T 1ijq_A 45 YWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL----FRENGS 120 (316)
T ss_dssp EEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEE----EECTTC
T ss_pred EEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEE----EECCCC
Confidence 445566788888887641 1111222222234568888865555544 34577899998864321111 122234
Q ss_pred CeEEEEECCCCcEEEEEeCC--CcEEEEEcCCCceEEEe-cccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 309 GISGTSIRPDSKIAATAGWD--RRVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~d--g~i~iwd~~~~~~~~~~-~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
....+++.|.+..|..+.+. ++|..++++- .....+ ...-...+.++|+|+++ ++++-+..+.|..+|+.
T Consensus 121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 67899999876655444543 6888888853 333323 22345678999998766 45556667788888873
No 256
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.74 E-value=0.14 Score=46.01 Aligned_cols=140 Identities=13% Similarity=0.096 Sum_probs=81.3
Q ss_pred CCCcEEEEeCCCCCCceeeee--c-----cccCeEEEEEeC--CCC-ceEEEEc---CCcEEEEEccCCCCeeEEeeeee
Q 016769 238 EDGSILVWDIRNPGIPLTAMK--V-----HLEPVLCLSIDE--SCN-GGISGGA---DQKIVLYNLDHSTGSCVIKKEIN 304 (383)
Q Consensus 238 ~dg~i~~wdl~~~~~~~~~~~--~-----h~~~v~~~~~~~--~~~-~~~s~~~---d~~i~~wdl~~~~~~~~~~~~~~ 304 (383)
.+|.|.++|+.++......+. + ..-....+.+.. ++. .++.+.. +.+|.+|+++..+....+.....
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 689999999874321122222 1 112345566533 333 3444432 46788998886655443333332
Q ss_pred -cCCCCeEEEEECCCCcEEEEEeC-----------------CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCE-EE
Q 016769 305 -LERPGISGTSIRPDSKIAATAGW-----------------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKL-MA 365 (383)
Q Consensus 305 -~~~~~i~~~~~~p~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~-la 365 (383)
..-...+.+.+.++|++.++..- .|.|..+|. ++ ...+...-...+.++||||++. ++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEE
Confidence 22346889999999988776541 134444443 33 2222223345799999999984 45
Q ss_pred EEeCCCcEEEEeCCC
Q 016769 366 SASEDSTVALWELYP 380 (383)
Q Consensus 366 s~s~d~~i~~w~~~~ 380 (383)
+-+..+.|..|++.+
T Consensus 238 adt~~~~I~~~~~~~ 252 (355)
T 3sre_A 238 AELLAHKIHVYEKHA 252 (355)
T ss_dssp EEGGGTEEEEEEECT
T ss_pred EeCCCCeEEEEEECC
Confidence 566788999998853
No 257
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.62 E-value=0.1 Score=46.08 Aligned_cols=148 Identities=10% Similarity=0.095 Sum_probs=89.1
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeec----cc--cCeEEEEE---eCCCCceEEEE-------------cCCcEEEEEc
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKV----HL--EPVLCLSI---DESCNGGISGG-------------ADQKIVLYNL 290 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~----h~--~~v~~~~~---~~~~~~~~s~~-------------~d~~i~~wdl 290 (383)
.++.-..++|..||..........+.. .. ..+..+.+ |+.+..+++.. .+..+..+|+
T Consensus 28 ~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl 107 (334)
T 2p9w_A 28 YQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNL 107 (334)
T ss_dssp EEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEES
T ss_pred EEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcC
Confidence 344457889999987643211111211 11 12468888 68754444333 2577889998
Q ss_pred c---CCCCeeEEeee--eec-------CCCCeEEEEECCCCcEEEEEeCC-CcEEEEEcCCCceEEEecc------cccc
Q 016769 291 D---HSTGSCVIKKE--INL-------ERPGISGTSIRPDSKIAATAGWD-RRVRIYNYRKGSALAILKY------HHAT 351 (383)
Q Consensus 291 ~---~~~~~~~~~~~--~~~-------~~~~i~~~~~~p~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~------h~~~ 351 (383)
. +.......... ... .....+.+++.++|+..++++.- +.|..++.+-. .+..+.- ..--
T Consensus 108 ~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G 186 (334)
T 2p9w_A 108 PLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPG 186 (334)
T ss_dssp SCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCS
T ss_pred CcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccC
Confidence 7 33322221110 000 11358899999999998988888 88777776533 3333211 1112
Q ss_pred eeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 352 CNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 352 v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
.+.++++|||+.|+....++.+.-+|+..|
T Consensus 187 ~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 187 YSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred cceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 568999999997777766999999997543
No 258
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.59 E-value=0.37 Score=42.91 Aligned_cols=188 Identities=12% Similarity=0.195 Sum_probs=105.9
Q ss_pred CCcceEEEEecCCCCeeeEeccCcCCCCCCcCCCCCceeeEEEe-ecCCCCCCceE-EEEEeC--CCcEEEEeCCCCCCc
Q 016769 178 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQA-YLPSKSQGFVN-VLAGYE--DGSILVWDIRNPGIP 253 (383)
Q Consensus 178 ~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~sg~~--dg~i~~wdl~~~~~~ 253 (383)
...+-+.++|+ +++.+..+.. ++.....+.. |.... ..... +++.-. +++|.+|++.-....
T Consensus 47 ~k~~gL~Vydl-~G~~l~~~~~------------g~~nnVD~r~~~~l~g-~~~dla~as~R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 47 NKKSGLVVYSL-DGKMLHSYNT------------GKLNNVDIRYDFPLNG-KKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp ETTTEEEEEET-TSCEEEEECC------------SCEEEEEEEEEEEETT-EEEEEEEEEECSTTCCEEEEEEECTTTCC
T ss_pred cCCCCEEEEcC-CCcEEEEccC------------CCcccEEEecccccCC-ceEeEEEEeCCCCCCCeEEEEEECCCCCc
Confidence 33467999999 8887777642 1111111111 10000 00001 333444 678999977321222
Q ss_pred eeeeec-------cccCeEEEEE--eCCCC--ceEEEEcCCcEEEEEccCC-CC--eeEEeeeeecCCCCeEEEEECCCC
Q 016769 254 LTAMKV-------HLEPVLCLSI--DESCN--GGISGGADQKIVLYNLDHS-TG--SCVIKKEINLERPGISGTSIRPDS 319 (383)
Q Consensus 254 ~~~~~~-------h~~~v~~~~~--~~~~~--~~~s~~~d~~i~~wdl~~~-~~--~~~~~~~~~~~~~~i~~~~~~p~~ 319 (383)
+..+.. ....+..+++ ++... +++....++.+..|++... .+ ...+...+... +.+-.+.+.+..
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~ 191 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEY 191 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTT
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCC
Confidence 433311 0022333444 66433 4677888999999998532 22 12222233332 467788888888
Q ss_pred cEEEEEeCCCcEEEEEcC-----CCceEEEec-ccc-cceeEEEE--eCCCC-EEEEEe-CCCcEEEEeCCC
Q 016769 320 KIAATAGWDRRVRIYNYR-----KGSALAILK-YHH-ATCNAVSF--SSDCK-LMASAS-EDSTVALWELYP 380 (383)
Q Consensus 320 ~~l~s~~~dg~i~iwd~~-----~~~~~~~~~-~h~-~~v~~v~~--spd~~-~las~s-~d~~i~~w~~~~ 380 (383)
.+|..+-.|.-|..++.+ +++.+..+. +|. ..+..+++ .++++ +|+.++ .+....+||...
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 889989998777666754 344555542 333 36888887 56666 555544 677999999853
No 259
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.56 E-value=0.11 Score=44.50 Aligned_cols=131 Identities=8% Similarity=-0.040 Sum_probs=82.0
Q ss_pred CCcEEEEeCCCCCCceeeeecccc-CeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEEC
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLE-PVLCLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 316 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~ 316 (383)
++.|.++|+.+.. .+..+..... -...++++. ..++.. -.++.+.++|.+... ... .+...... ...++
T Consensus 43 ~s~v~~iD~~tg~-v~~~i~l~~~~fgeGi~~~g--~~lyv~t~~~~~v~viD~~t~~--v~~--~i~~g~~~--g~glt 113 (266)
T 2iwa_A 43 RSSVRQVALQTGK-VENIHKMDDSYFGEGLTLLN--EKLYQVVWLKNIGFIYDRRTLS--NIK--NFTHQMKD--GWGLA 113 (266)
T ss_dssp TCEEEEEETTTCC-EEEEEECCTTCCEEEEEEET--TEEEEEETTCSEEEEEETTTTE--EEE--EEECCSSS--CCEEE
T ss_pred CCEEEEEECCCCC-EEEEEecCCCcceEEEEEeC--CEEEEEEecCCEEEEEECCCCc--EEE--EEECCCCC--eEEEE
Confidence 6899999998854 3444332111 123455553 445444 457889999986432 222 22222111 23355
Q ss_pred CCCcEEEEEeCCCcEEEEEcCCCceEEEecc--cc---cceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 317 PDSKIAATAGWDRRVRIYNYRKGSALAILKY--HH---ATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 317 p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--h~---~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
+|++.++.+..+++|.++|..+.+....+.- +. ..++.+.|. +|+..+....++.|.+-|..
T Consensus 114 ~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~ 180 (266)
T 2iwa_A 114 TDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAK 180 (266)
T ss_dssp ECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETT
T ss_pred ECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECC
Confidence 6777666666789999999999887776542 11 246788888 78777777778888888874
No 260
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.55 E-value=0.12 Score=43.94 Aligned_cols=137 Identities=10% Similarity=0.058 Sum_probs=82.7
Q ss_pred EEEEEeCCC--cEEEEeCCCCCCceeeeeccccCe-EEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeeeeecCC
Q 016769 232 NVLAGYEDG--SILVWDIRNPGIPLTAMKVHLEPV-LCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEINLER 307 (383)
Q Consensus 232 ~~~sg~~dg--~i~~wdl~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~~~~~ 307 (383)
...+.+.+| .|+.+|+++... +..+....... ..++++. +.+.... .++.+.+||.++..... .+....
T Consensus 55 LyestG~~g~S~v~~vD~~Tgkv-~~~~~l~~~~FgeGit~~g--~~ly~ltw~~~~v~v~D~~t~~~~~----ti~~~~ 127 (262)
T 3nol_A 55 FYESTGLNGRSSIRKVDIESGKT-LQQIELGKRYFGEGISDWK--DKIVGLTWKNGLGFVWNIRNLRQVR----SFNYDG 127 (262)
T ss_dssp EEEEEEETTEEEEEEECTTTCCE-EEEEECCTTCCEEEEEEET--TEEEEEESSSSEEEEEETTTCCEEE----EEECSS
T ss_pred EEEECCCCCCceEEEEECCCCcE-EEEEecCCccceeEEEEeC--CEEEEEEeeCCEEEEEECccCcEEE----EEECCC
Confidence 345556655 899999998543 44443322221 2345543 4444443 57889999987544222 222221
Q ss_pred CCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecc----cc-cceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 308 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY----HH-ATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----h~-~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
.+..+.+|++.++.+..+++|.++|..+.+.+.++.- .. ..++.+.|. +|+..|..-.+..|.+.|..
T Consensus 128 ---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~ 200 (262)
T 3nol_A 128 ---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPE 200 (262)
T ss_dssp ---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTT
T ss_pred ---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECC
Confidence 1122335676666666678899999999888776542 12 345667886 78877777677788777653
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.48 E-value=0.27 Score=44.65 Aligned_cols=142 Identities=12% Similarity=0.076 Sum_probs=85.0
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEE-EEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s-~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.++-...+.|..+++.... ....+.........+++++....++. -...+.|.+.+++....... .........
T Consensus 131 y~~D~~~~~I~r~~~~g~~-~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l----~~~~l~~P~ 205 (386)
T 3v65_B 131 FWSDVTLDRILRANLNGSN-VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL----LWQSLEKPR 205 (386)
T ss_dssp EEEETTTTEEEEEETTSCC-EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEE----ECSSCSCEE
T ss_pred EEEeCCCCcEEEEecCCCC-cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEe----ecCCCCCCc
Confidence 4455567788888876532 12222222234456888875555544 44467788888764332221 112234678
Q ss_pred EEEECCCCcEEEEEeC-C-CcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 312 GTSIRPDSKIAATAGW-D-RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~-d-g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
++++.|.+.+|..+.+ + ++|..++++...............+.++|+|+++ ++++=+..+.|..+|+.
T Consensus 206 giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 206 AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred EEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 9999987665544443 4 6888888864433333333344578999998665 55666667788888863
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.37 E-value=0.31 Score=43.58 Aligned_cols=142 Identities=11% Similarity=0.044 Sum_probs=85.5
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceE-EEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.++-...+.|..+++.... ....+.........++++.....++ +-...+.|.+.+++....... .........
T Consensus 88 y~~D~~~~~I~r~~~~g~~-~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l----~~~~l~~P~ 162 (349)
T 3v64_C 88 FWSDVTLDRILRANLNGSN-VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL----LWQSLEKPR 162 (349)
T ss_dssp EEEETTTTEEEEEETTSCS-CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE----ECTTCSCEE
T ss_pred EEEeccCCceEEEecCCCC-ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE----EeCCCCCcc
Confidence 3455567788888876532 1222222233456788887555554 444567899998875432221 112234578
Q ss_pred EEEECCCCcEEEEEe-CC-CcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 312 GTSIRPDSKIAATAG-WD-RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~-~d-g~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
++++.|.+..|.-+. .+ ++|..++++...........-...+.++|+|+++ +.++=+..+.|..+|+.
T Consensus 163 ~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 163 AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred eEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 999998665544444 44 7898888864433322222344578999998665 55666667788888864
No 263
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.26 E-value=0.51 Score=41.60 Aligned_cols=143 Identities=13% Similarity=0.050 Sum_probs=85.9
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceE-EEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
..+-...+.|..+++.........+.........++++.....++ +-...+.|.+++++........ ........
T Consensus 50 yw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~----~~~~~~P~ 125 (318)
T 3sov_A 50 YWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLF----WQELDQPR 125 (318)
T ss_dssp EEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE----CSSCSSEE
T ss_pred EEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEE----eCCCCCcc
Confidence 345556677888887653211122222233456788887555554 4445678999988753322221 12334678
Q ss_pred EEEECCCCcEEEEEeC--CCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 312 GTSIRPDSKIAATAGW--DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
++++.|.+.+|.-+.+ .+.|..++++-..........-...+.++|+|+++ +..+=+..+.|..+|+.
T Consensus 126 giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 126 AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp EEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 9999987665555553 57888888863332222222334578999999665 55666677888888874
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.08 E-value=0.83 Score=41.68 Aligned_cols=143 Identities=6% Similarity=-0.027 Sum_probs=84.9
Q ss_pred EEEEeCCCcEEEEeCCCCC---CceeeeeccccCeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 233 VLAGYEDGSILVWDIRNPG---IPLTAMKVHLEPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
..+-...+.|..+++.... .....+.........++++.....++.. ...+.|.+.+++......+ ......
T Consensus 127 ywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l----~~~~~~ 202 (400)
T 3p5b_L 127 YWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL----FRENGS 202 (400)
T ss_dssp EEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEE----EECSSC
T ss_pred EEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEE----EeCCCC
Confidence 3455566778888875411 1122222233456788898755555444 4567888888764332221 122234
Q ss_pred CeEEEEECCCCcEEEEEeC--CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCE-EEEEeCCCcEEEEeCC
Q 016769 309 GISGTSIRPDSKIAATAGW--DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKL-MASASEDSTVALWELY 379 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~-las~s~d~~i~~w~~~ 379 (383)
...++++.|.+.+|.-+.+ .+.|...+++-..........-...+.|+|+|+++. ..+=+..+.|..+|+.
T Consensus 203 ~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 203 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 5789999997665555543 378999998654433333333456789999987764 4555566788888763
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.07 E-value=0.18 Score=46.74 Aligned_cols=133 Identities=8% Similarity=0.029 Sum_probs=79.7
Q ss_pred CcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEcCC----c-EEEEEccCCCCeeEEeeeeecCCCCeEEEE
Q 016769 240 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ----K-IVLYNLDHSTGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 240 g~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d~----~-i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~ 314 (383)
+.|+.+|+.+.. +..+.........+++++++. ++.+...+ . +...+.... .... .... .......++
T Consensus 162 ~~I~~id~~~g~--v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~-~~~~--~~~~-~~~~P~gia 234 (433)
T 4hw6_A 162 DAFRHVDFVNQY--VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG-FTER--LSLC-NARGAKTCA 234 (433)
T ss_dssp SCEEEEETTTTE--EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT-TCCE--EEEE-ECSSBCCCE
T ss_pred CCEEEEECCCCE--EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC-eecc--cccc-ccCCCCEEE
Confidence 789999986532 223333344578899999988 55544322 1 222222111 0000 0111 123467789
Q ss_pred ECC-CCcEEEEEeCCCcEEEEEcCCCceEEEecc--cccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 315 IRP-DSKIAATAGWDRRVRIYNYRKGSALAILKY--HHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 315 ~~p-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
++| ++.++++-..+++|+.+|..++.....+.. .......++|+|+++ ++++-...+.|..+++.
T Consensus 235 vd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 235 VHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp ECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 999 777766666788999999987765222211 122234699999998 66777778889988764
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.03 E-value=0.3 Score=48.06 Aligned_cols=187 Identities=11% Similarity=0.060 Sum_probs=102.7
Q ss_pred CCcceEEEEecCCCCeeeEeccCcCCCCC-CcC--CCCCceeeEEEeecCCCCCCceEEEEEeCCCcEEEEeCCCCCCce
Q 016769 178 EQLSEVEIWDLNTAERCTRLHQNSCGGSP-NFS--SKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 254 (383)
Q Consensus 178 ~~~~~i~~Wdl~~~~~~~~~~~~~~~~s~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~sg~~dg~i~~wdl~~~~~~~ 254 (383)
+.++.|..+|.++++.+-+.......... ... ....+. ++. . ..++.++.|+.|..+|.+++.. +
T Consensus 73 ~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~--~~v~v~~~dg~l~alD~~tG~~-~ 140 (668)
T 1kv9_A 73 MSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGV--ALW-------G--DKVYVGTLDGRLIALDAKTGKA-I 140 (668)
T ss_dssp EGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCC--EEE-------B--TEEEEECTTSEEEEEETTTCCE-E
T ss_pred CCCCeEEEEECCCChhceEECCCCCccccccccccCCccce--EEE-------C--CEEEEEcCCCEEEEEECCCCCE-e
Confidence 34678999999999987666422100000 000 000000 110 1 1477788899999999887543 2
Q ss_pred eeeecc-c---cCeEE-EEEeCCCCceEEEEc------CCcEEEEEccCCCCeeEEeeeeecC-----------------
Q 016769 255 TAMKVH-L---EPVLC-LSIDESCNGGISGGA------DQKIVLYNLDHSTGSCVIKKEINLE----------------- 306 (383)
Q Consensus 255 ~~~~~h-~---~~v~~-~~~~~~~~~~~s~~~------d~~i~~wdl~~~~~~~~~~~~~~~~----------------- 306 (383)
=..+.. . ..+.. ..+. ...++.+.. ++.|..+|.++. ...........
T Consensus 141 W~~~~~~~~~~~~~~~~P~v~--~~~v~vg~~~~~~~~~g~v~a~D~~tG--~~~W~~~~~~~~p~~~~~~~~~~~~~~~ 216 (668)
T 1kv9_A 141 WSQQTTDPAKPYSITGAPRVV--KGKVIIGNGGAEYGVRGFVSAYDADTG--KLAWRFYTVPGDPALPYEHPELREAAKT 216 (668)
T ss_dssp EEEECSCTTSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTC--CEEEEEESSCCCTTSCCSSHHHHHHHTT
T ss_pred eeeccCCCCCcceecCCCEEE--CCEEEEeCCCCCcCCCCEEEEEECCCC--cEEEEecccCCCCCcccccccccccccc
Confidence 111110 0 00000 0111 123344432 577888887644 33332221000
Q ss_pred ------------CCCeEEEEECCCCcEEEEEeCCCc-------------------EEEEEcCCCceEEEecc--cc----
Q 016769 307 ------------RPGISGTSIRPDSKIAATAGWDRR-------------------VRIYNYRKGSALAILKY--HH---- 349 (383)
Q Consensus 307 ------------~~~i~~~~~~p~~~~l~s~~~dg~-------------------i~iwd~~~~~~~~~~~~--h~---- 349 (383)
......+++.|+...+..++.++. |..+|.++++.+..++. |.
T Consensus 217 ~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~ 296 (668)
T 1kv9_A 217 WQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDF 296 (668)
T ss_dssp CCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC
T ss_pred CCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccc
Confidence 001124678888888888877764 99999999999887764 32
Q ss_pred ---cceeEEEEeCCCC---EEEEEeCCCcEEEEeCCC
Q 016769 350 ---ATCNAVSFSSDCK---LMASASEDSTVALWELYP 380 (383)
Q Consensus 350 ---~~v~~v~~spd~~---~las~s~d~~i~~w~~~~ 380 (383)
.+.....+..||+ .++.++.+|.++++|...
T Consensus 297 ~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t 333 (668)
T 1kv9_A 297 TATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN 333 (668)
T ss_dssp CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT
T ss_pred cCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC
Confidence 2233333444775 688999999999998753
No 267
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.99 E-value=0.2 Score=49.96 Aligned_cols=135 Identities=12% Similarity=-0.007 Sum_probs=74.3
Q ss_pred cEEEEeCCCC-CCceeeeeccccCeEEEEEeCCCCceEEEEcC-----CcEEEEEccCCCCeeEEeeeeecCCCCeEEEE
Q 016769 241 SILVWDIRNP-GIPLTAMKVHLEPVLCLSIDESCNGGISGGAD-----QKIVLYNLDHSTGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 241 ~i~~wdl~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d-----~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~ 314 (383)
+|+++|+.++ ......+.. ....+.|+++++.++....| ..|.++++........+.... ........+.
T Consensus 202 ~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~~~~~~~~ 277 (751)
T 2xe4_A 202 TIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEE-HNPLFSAFMY 277 (751)
T ss_dssp EEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEEC-CCTTCEEEEE
T ss_pred EEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEec-CCCceEEEEE
Confidence 5999999875 321111211 12357789998877766655 246677776543211111111 1112356788
Q ss_pred ECCCCcEEEEEeC---CCcEEEEEcCCCc-eE--EEe-cccccceeEEEEeCCCCEEEEEeCC--C--cEEEEeCC
Q 016769 315 IRPDSKIAATAGW---DRRVRIYNYRKGS-AL--AIL-KYHHATCNAVSFSSDCKLMASASED--S--TVALWELY 379 (383)
Q Consensus 315 ~~p~~~~l~s~~~---dg~i~iwd~~~~~-~~--~~~-~~h~~~v~~v~~spd~~~las~s~d--~--~i~~w~~~ 379 (383)
++||+++|+..+. ...|+++|+.++. .. ..+ ........++.|+.++.+++....+ + .|..+++.
T Consensus 278 ~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 278 KAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp ECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETT
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCC
Confidence 9999998887663 3468888987752 12 333 3344455566665444445555544 3 44445543
No 268
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.97 E-value=1.3 Score=42.89 Aligned_cols=53 Identities=9% Similarity=-0.031 Sum_probs=36.4
Q ss_pred CCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 327 WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
.+|.+..||+.+++.+.... +..+...-.+...+..++.++.|+.++.||...
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~-~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~t 503 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDT 503 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred CcCeEEEEECCCCCEEeEec-CCCCccCcceEecCCEEEEECCCCeEEEEECCC
Confidence 35789999999999887664 222222112233566777799999999998754
No 269
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.92 E-value=0.066 Score=53.50 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=70.0
Q ss_pred CeEEEEEe-CCCCceEEE-EcCC----cEEEEEccCC-CCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC-----Cc
Q 016769 263 PVLCLSID-ESCNGGISG-GADQ----KIVLYNLDHS-TGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RR 330 (383)
Q Consensus 263 ~v~~~~~~-~~~~~~~s~-~~d~----~i~~wdl~~~-~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d-----g~ 330 (383)
.+....++ |++..++-. ..+| .|+++|++.. .. +...+. ....+++|+||++.|+-...| ..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~---l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT---IADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC---CCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe---CCcccc---CceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 46678889 999876533 2222 4889998764 31 111111 113467899999887777765 25
Q ss_pred EEEEEcCCCce--EEEec-ccccceeEEEEeCCCCEEEEEeC---CCcEEEEeCCCC
Q 016769 331 VRIYNYRKGSA--LAILK-YHHATCNAVSFSSDCKLMASASE---DSTVALWELYPP 381 (383)
Q Consensus 331 i~iwd~~~~~~--~~~~~-~h~~~v~~v~~spd~~~las~s~---d~~i~~w~~~~~ 381 (383)
|+++++.++.. ...+. ........+.|||||++|+..+. ...|.++|+..+
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 88888877642 22232 22334567899999998876553 335677777543
No 270
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.84 E-value=0.47 Score=39.90 Aligned_cols=136 Identities=13% Similarity=0.030 Sum_probs=80.3
Q ss_pred EEEEeCC--CcEEEEeCCCCCCceeeeeccccCe-EEEEEeCCCCceEE-EEcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 233 VLAGYED--GSILVWDIRNPGIPLTAMKVHLEPV-LCLSIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 233 ~~sg~~d--g~i~~wdl~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~~s-~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
..+.+.+ +.|+.+|++++.. +..+.....+. ..+++.. ..+.. .-.++.+.+||.++... . ..+.....
T Consensus 34 yestG~~g~S~v~~vD~~tgkv-~~~~~l~~~~fgeGi~~~~--~~ly~ltw~~~~v~v~D~~tl~~--~--~ti~~~~~ 106 (243)
T 3mbr_X 34 YESTGETGRSSVRKVDLETGRI-LQRAEVPPPYFGAGIVAWR--DRLIQLTWRNHEGFVYDLATLTP--R--ARFRYPGE 106 (243)
T ss_dssp EEEECCTTSCEEEEEETTTCCE-EEEEECCTTCCEEEEEEET--TEEEEEESSSSEEEEEETTTTEE--E--EEEECSSC
T ss_pred EEECCCCCCceEEEEECCCCCE-EEEEeCCCCcceeEEEEeC--CEEEEEEeeCCEEEEEECCcCcE--E--EEEeCCCC
Confidence 4455554 5899999998543 44443322211 2344443 44433 34578899999875432 1 22222211
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecc--cc---cceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY--HH---ATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--h~---~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
-.+ +.++++.++.+..+++|.++|..+.+.+.++.- +. ..++-+.+. +|+.+|....+..|.+-|..
T Consensus 107 -Gwg--lt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~ 178 (243)
T 3mbr_X 107 -GWA--LTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPA 178 (243)
T ss_dssp -CCE--EEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTT
T ss_pred -ceE--EeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECC
Confidence 123 335666666666789999999999888776642 21 345667765 77777777667777776653
No 271
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.77 E-value=1.8 Score=43.24 Aligned_cols=139 Identities=9% Similarity=0.100 Sum_probs=86.5
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeee---------ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeee
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMK---------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI 303 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~ 303 (383)
+-.|+.++-|..||..+... ..+. .....|.++..+..+..+..|+.++.+.++|.+............
T Consensus 370 lWiGt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~ 447 (795)
T 4a2l_A 370 LWIGTNDGGLNLYNPITQRF--TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNS 447 (795)
T ss_dssp EEEEESSSCEEEECTTTCCE--EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTS
T ss_pred EEEEECCCCeEEEcCCCCcE--EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCC
Confidence 66788888899999765322 2221 113568888888776536777777889999876432111100000
Q ss_pred ecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecc-------cccceeEEEEeCCCCEEEEEeCCCcEEEE
Q 016769 304 NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY-------HHATCNAVSFSSDCKLMASASEDSTVALW 376 (383)
Q Consensus 304 ~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~v~~spd~~~las~s~d~~i~~w 376 (383)
......|.++...++++..+ |+.+ -+.+||..+++... +.. ....|.++...++|++.+... + -+..|
T Consensus 448 ~l~~~~v~~i~~d~~g~lwi-gt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~ 522 (795)
T 4a2l_A 448 QLVNENVYAILPDGEGNLWL-GTLS-ALVRFNPEQRSFTT-IEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVF 522 (795)
T ss_dssp CCSCSCEEEEEECSSSCEEE-EESS-CEEEEETTTTEEEE-CCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEE
T ss_pred CcCCCeeEEEEECCCCCEEE-EecC-ceeEEeCCCCeEEE-ccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEE
Confidence 12235688899888887655 4454 48889987765432 211 235788999999998666554 4 46666
Q ss_pred eC
Q 016769 377 EL 378 (383)
Q Consensus 377 ~~ 378 (383)
|.
T Consensus 523 ~~ 524 (795)
T 4a2l_A 523 KQ 524 (795)
T ss_dssp EE
T ss_pred eC
Confidence 64
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.68 E-value=1.6 Score=41.97 Aligned_cols=52 Identities=13% Similarity=0.072 Sum_probs=37.0
Q ss_pred CCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 328 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
+|.|..||+.+++.+....... ++..-.+...+.+++.|+.|+.++.||...
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~t 516 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKS 516 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTT
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCC
Confidence 6889999999999887665322 222222233466788899999999999754
No 273
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.60 E-value=0.85 Score=38.72 Aligned_cols=113 Identities=11% Similarity=0.106 Sum_probs=71.4
Q ss_pred cCeEEEEEeCCCCceEE-EEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCc
Q 016769 262 EPVLCLSIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS 340 (383)
Q Consensus 262 ~~v~~~~~~~~~~~~~s-~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~ 340 (383)
..+..++++++...+++ ...++.|...|++ +.......+ ......-++++.+++.++++.-.++.+.++++....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~---g~v~~~i~l-~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN---GDLIRTIPL-DFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT---CCEEEEEEC-SSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC---CCEEEEEec-CCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 46788999987776654 5556667666664 332222112 122457788999999887776677899999986544
Q ss_pred eE---EEec------ccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 341 AL---AILK------YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 341 ~~---~~~~------~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.+ .... ......-.++|.|+++.|..+.+..-..+|.+
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 22 2221 11223578999999976666666555555554
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.59 E-value=1.3 Score=40.30 Aligned_cols=138 Identities=13% Similarity=0.086 Sum_probs=82.1
Q ss_pred CCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECC
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 317 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p 317 (383)
...|+..|+..... ..+......+..++|++....++-.. ..+.|..++++....................++++.+
T Consensus 91 ~~~I~~i~l~~~~~--~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~ 168 (400)
T 3p5b_L 91 RHEVRKMTLDRSEY--TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 168 (400)
T ss_dssp TTEEEEECTTSCSC--EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEET
T ss_pred cceeEEEccCCcce--eEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEe
Confidence 57888888875322 22223345678899998666665544 4677888887642100001111222234578899987
Q ss_pred -CCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEe-C-CCcEEEEeC
Q 016769 318 -DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASAS-E-DSTVALWEL 378 (383)
Q Consensus 318 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s-~-d~~i~~w~~ 378 (383)
.++.+++-...++|.+.+++.......+.........|++.|.+..|..+. . .+.|...++
T Consensus 169 ~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~ 232 (400)
T 3p5b_L 169 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 232 (400)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEET
T ss_pred cCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeC
Confidence 556666666788999999976554434433444578999999665444333 2 366777665
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.58 E-value=1.1 Score=39.28 Aligned_cols=135 Identities=12% Similarity=0.054 Sum_probs=79.2
Q ss_pred CCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCC---CCeeEEeeeeecCCCCeEEEE
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHS---TGSCVIKKEINLERPGISGTS 314 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~---~~~~~~~~~~~~~~~~i~~~~ 314 (383)
...|+..|+..... ...+. .......+.+++....++... ..+.|..++++.. +.... ..........+++
T Consensus 9 ~~~I~~i~~~~~~~-~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~---~~~~~~~~p~gla 83 (316)
T 1ijq_A 9 RHEVRKMTLDRSEY-TSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT---VISRDIQAPDGLA 83 (316)
T ss_dssp BSSEEEEETTSCCC-EEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEE---EECSSCSCCCEEE
T ss_pred CCeEEEEECCCcce-Eehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEE---EEeCCCCCcCEEE
Confidence 45688899876432 22222 344567899998766555444 4678888888641 11111 1111223467889
Q ss_pred ECCC-CcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEE-EEEeCC-CcEEEEeC
Q 016769 315 IRPD-SKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASASED-STVALWEL 378 (383)
Q Consensus 315 ~~p~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~l-as~s~d-~~i~~w~~ 378 (383)
+.+. ++.+++-..+++|.++|++.......+.........+++.|++..| .+.... +.|...++
T Consensus 84 vd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~ 150 (316)
T 1ijq_A 84 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 150 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcC
Confidence 9864 4555666678899999987543332333234567899999966644 443333 56777665
No 276
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.44 E-value=2.4 Score=42.36 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=88.1
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeee-------ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeee--
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMK-------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI-- 303 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~-- 303 (383)
+-.|+.++-|..|+...... ..+. .....|.++..+.++. +..|+.++.+..||.....-... ....
T Consensus 323 lWigt~~~Gl~~~~~~~~~~--~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~-~~~~~~ 398 (795)
T 4a2l_A 323 MWLGTYFGGLNYYHPIRNRF--KNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSY-TLQEDE 398 (795)
T ss_dssp EEEEESSSCEEEECGGGGSS--EEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEE-CCC---
T ss_pred EEEEECCCCeEEeCCCcccc--eEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEE-ecCCCC
Confidence 66788888899998654321 1111 1234688888888764 56677777899997654321111 0000
Q ss_pred ---ecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEec-----ccccceeEEEEeCCCCEEEEEeCCCcEEE
Q 016769 304 ---NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK-----YHHATCNAVSFSSDCKLMASASEDSTVAL 375 (383)
Q Consensus 304 ---~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~h~~~v~~v~~spd~~~las~s~d~~i~~ 375 (383)
......|.++...++++.|..|+.++-|..||..+++.. .+. .....|.++...++|++.+... +| +.+
T Consensus 399 ~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~G-l~~ 475 (795)
T 4a2l_A 399 SARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGTL-SA-LVR 475 (795)
T ss_dssp ---CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEES-SC-EEE
T ss_pred cccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEec-Cc-eeE
Confidence 112356888888888885666888778999999877643 232 1345788998888888665544 44 666
Q ss_pred EeC
Q 016769 376 WEL 378 (383)
Q Consensus 376 w~~ 378 (383)
||.
T Consensus 476 ~~~ 478 (795)
T 4a2l_A 476 FNP 478 (795)
T ss_dssp EET
T ss_pred EeC
Confidence 764
No 277
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.41 E-value=1.8 Score=43.25 Aligned_cols=142 Identities=6% Similarity=-0.009 Sum_probs=84.8
Q ss_pred EEEEeCCCcEEEEeCCCCC---CceeeeeccccCeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 233 VLAGYEDGSILVWDIRNPG---IPLTAMKVHLEPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
.++-...+.|+.+++.... .....+.........++++..+..++.. ...++|.+.+++......+ ......
T Consensus 439 Y~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l----~~~~l~ 514 (791)
T 3m0c_C 439 YWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL----FRENGS 514 (791)
T ss_dssp EEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEE----EECTTC
T ss_pred EEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEE----EeCCCC
Confidence 4455556778888875421 1122222233455678898777655544 4567899998874332221 122234
Q ss_pred CeEEEEECCCCcEEEEEeC--CCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeC
Q 016769 309 GISGTSIRPDSKIAATAGW--DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWEL 378 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~ 378 (383)
...++++.|...+|.-+.+ .++|...+++-......+...-...+.|++.|.++ ++++=.....|...++
T Consensus 515 ~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 515 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEec
Confidence 5889999997655555543 26899999865444434443445788999997665 4455455667877776
No 278
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.27 E-value=0.63 Score=41.04 Aligned_cols=138 Identities=16% Similarity=0.125 Sum_probs=81.3
Q ss_pred CCcEEEEeCC---CCCCc-eeeeecc-----------ccCeEEEEEeCCCCceEEEEcC-CcEEEEEccCCCCeeEEeee
Q 016769 239 DGSILVWDIR---NPGIP-LTAMKVH-----------LEPVLCLSIDESCNGGISGGAD-QKIVLYNLDHSTGSCVIKKE 302 (383)
Q Consensus 239 dg~i~~wdl~---~~~~~-~~~~~~h-----------~~~v~~~~~~~~~~~~~s~~~d-~~i~~wdl~~~~~~~~~~~~ 302 (383)
+..|..+|+. ++... ...+... ......+.+|+.++..++++.. +.|...+-+... ...+...
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~~~~~ 177 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-VSTFAWE 177 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-EEEEEEC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-Eeeeeec
Confidence 6778889988 43332 1122111 1246789999999988888887 777766654321 1111111
Q ss_pred e--ecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCce--EEEec-ccc---cceeE-EEEeCCCCE-EEEEeCCCc
Q 016769 303 I--NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA--LAILK-YHH---ATCNA-VSFSSDCKL-MASASEDST 372 (383)
Q Consensus 303 ~--~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~-~h~---~~v~~-v~~spd~~~-las~s~d~~ 372 (383)
. .....+.++++++|+++.|+....+|.+..||+.+... +..-+ +.. ..... +.---+|+. |++.+..+.
T Consensus 178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~ 257 (334)
T 2p9w_A 178 SGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYA 257 (334)
T ss_dssp CCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEE
T ss_pred CCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCE
Confidence 1 11223578999999999888887799999999986543 32110 211 11222 222236775 677777766
Q ss_pred EEEEe
Q 016769 373 VALWE 377 (383)
Q Consensus 373 i~~w~ 377 (383)
+.+.+
T Consensus 258 ~~l~S 262 (334)
T 2p9w_A 258 ISFRS 262 (334)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 55544
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.23 E-value=1 Score=45.11 Aligned_cols=140 Identities=12% Similarity=0.056 Sum_probs=80.7
Q ss_pred eCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEE
Q 016769 237 YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSI 315 (383)
Q Consensus 237 ~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~ 315 (383)
+....|+..++.... ...+......+..++++.....++.. ...+.|+.++++...........+........++++
T Consensus 401 an~~~Ir~i~l~~~~--~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv 478 (791)
T 3m0c_C 401 TNRHEVRKMTLDRSE--YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 478 (791)
T ss_dssp ECBSSEEEECTTSCC--CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred ccccceeEeeccCCc--ceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence 345678888876532 22233334566788998865555444 445778888886421100111112222345678999
Q ss_pred CCCC-cEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEE-EEEeCC-CcEEEEeC
Q 016769 316 RPDS-KIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASASED-STVALWEL 378 (383)
Q Consensus 316 ~p~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~l-as~s~d-~~i~~w~~ 378 (383)
.+.+ +++++-...++|.+.+++.......+.........|++.|.+..| .+-..+ +.|...++
T Consensus 479 D~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~ 544 (791)
T 3m0c_C 479 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 544 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred eecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEec
Confidence 8766 556666678899999997554333333344567899999975544 443232 56766665
No 280
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.12 E-value=0.41 Score=43.75 Aligned_cols=71 Identities=10% Similarity=0.158 Sum_probs=54.3
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCc------------eEEEecc------cccceeEEEEeCCC---CEEEEE
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGS------------ALAILKY------HHATCNAVSFSSDC---KLMASA 367 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~------------~~~~~~~------h~~~v~~v~~spd~---~~las~ 367 (383)
.+..+.++|+|+++|..+ +..|.|-.+..+. +.+++.- ...+|..+.|||-+ ..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 577899999999998765 6689999997432 1112221 24679999999954 589999
Q ss_pred eCCCcEEEEeCCC
Q 016769 368 SEDSTVALWELYP 380 (383)
Q Consensus 368 s~d~~i~~w~~~~ 380 (383)
..|++|++||+..
T Consensus 146 tsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 146 KEDDTITMFDILN 158 (452)
T ss_dssp ETTSCEEEEETTC
T ss_pred ecCCEEEEEEccc
Confidence 9999999999963
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.08 E-value=1.7 Score=38.62 Aligned_cols=140 Identities=15% Similarity=0.309 Sum_probs=82.8
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCC----CC----ceEEEEc--CCcEEEEEccCCCCeeEEeee
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDES----CN----GGISGGA--DQKIVLYNLDHSTGSCVIKKE 302 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~----~~----~~~s~~~--d~~i~~wdl~~~~~~~~~~~~ 302 (383)
++.....+-+.+||+ + +..+..+.. ..++.+.+-+. +. .+++... +++|.+|+++..+........
T Consensus 43 ii~t~k~~gL~Vydl-~-G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~ 118 (355)
T 3amr_A 43 LITTNKKSGLVVYSL-D-GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTD 118 (355)
T ss_dssp EEEEETTTEEEEEET-T-SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSC
T ss_pred EEEEcCCCCEEEEcC-C-CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccc
Confidence 455566778999999 4 333554542 33444444221 11 1233334 588999998654433211100
Q ss_pred ----eecCCCCeEEEEE--CCC-Cc-EEEEEeCCCcEEEEEcC-------CCceEEEecccccceeEEEEeCCCCEEEEE
Q 016769 303 ----INLERPGISGTSI--RPD-SK-IAATAGWDRRVRIYNYR-------KGSALAILKYHHATCNAVSFSSDCKLMASA 367 (383)
Q Consensus 303 ----~~~~~~~i~~~~~--~p~-~~-~l~s~~~dg~i~iwd~~-------~~~~~~~~~~h~~~v~~v~~spd~~~las~ 367 (383)
+......+.++++ +|. ++ |++....+|++..|++. +.+.+.++.- ...+..+...++...|..+
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEe
Confidence 1111145667777 774 43 68888899999999993 2244555542 3456677778888899999
Q ss_pred eCCCcEEEEeCC
Q 016769 368 SEDSTVALWELY 379 (383)
Q Consensus 368 s~d~~i~~w~~~ 379 (383)
-+|.- ||.+.
T Consensus 198 eEd~G--Iw~~d 207 (355)
T 3amr_A 198 EEDEA--IWKFS 207 (355)
T ss_dssp ETTTE--EEEEE
T ss_pred cccce--EEEEe
Confidence 99865 56553
No 282
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.92 E-value=1.5 Score=37.05 Aligned_cols=140 Identities=12% Similarity=-0.048 Sum_probs=83.0
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc---CCcEEEEEccCCCCeeEEeeeeecCCCC
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA---DQKIVLYNLDHSTGSCVIKKEINLERPG 309 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~---d~~i~~wdl~~~~~~~~~~~~~~~~~~~ 309 (383)
.++....+.|.++|+..... .............+++++.+..++.+.. .+.|..++++....... .......
T Consensus 94 yv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~----~~~~~~~ 168 (267)
T 1npe_A 94 FWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL----AQDNLGL 168 (267)
T ss_dssp EEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE----ECTTCSC
T ss_pred EEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE----EECCCCC
Confidence 44556678899999864221 1122222235578999986666555543 36788888764332111 1112245
Q ss_pred eEEEEECCCCcEE-EEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 310 ISGTSIRPDSKIA-ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 310 i~~~~~~p~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
..+++++|+++.| ++-...++|.++|++.......+.+ ......+++. ++..+++...++.|..+|..
T Consensus 169 P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred CcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence 7899999986544 5555678999999975443333332 2234556654 34455555566888888764
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.83 E-value=0.15 Score=50.37 Aligned_cols=141 Identities=6% Similarity=-0.013 Sum_probs=77.5
Q ss_pred EEeCCCcEEEEeCCCC---CCceeeeeccccCeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 235 AGYEDGSILVWDIRNP---GIPLTAMKVHLEPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 235 sg~~dg~i~~wdl~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
+-...+.|+.+++... ......+.........++++.....++.. ...+.|.+.+++...... .........
T Consensus 423 sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~----l~~~~~~~P 498 (699)
T 1n7d_A 423 SDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT----LFREQGSKP 498 (699)
T ss_dssp CCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEE----ECCCSSCCC
T ss_pred EecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEE----EEeCCCCCc
Confidence 3345677888887641 11111111112233467777544444433 456788888876432111 111122346
Q ss_pred EEEEECCCCcEEEEEeC--CCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 311 SGTSIRPDSKIAATAGW--DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
..+++.|.+.+|..+.+ .++|..++++...........-...+.|+|+|+++ ++++-+..+.|..+++.
T Consensus 499 ~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 499 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp CCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred ceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 78899997655444443 26888888753322222222234567899999754 66666777788888873
No 284
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.69 E-value=1.4 Score=38.21 Aligned_cols=109 Identities=16% Similarity=0.102 Sum_probs=63.9
Q ss_pred eEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC--cEEEEEcCCCce
Q 016769 264 VLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR--RVRIYNYRKGSA 341 (383)
Q Consensus 264 v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg--~i~iwd~~~~~~ 341 (383)
...+.+++++..+++...++.|..||.+.. . .. ... ......++++.++++++++..... .|..+|..+++.
T Consensus 34 pegia~~~~g~lyv~d~~~~~I~~~d~~g~--~-~~--~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEVGEIVSITPDGN--Q-QI--HAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCC--E-EE--EEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred cceEEECCCCCEEEEeCCCCeEEEECCCCc--e-EE--EEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 346777776653344345677877775431 1 11 111 124578999999999766654433 477778777765
Q ss_pred EEEec-ccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 342 LAILK-YHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 342 ~~~~~-~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
..... ........+++.+++..+++-+.++.|..+|.
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~ 145 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDV 145 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEET
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeC
Confidence 32221 12223455565666656666666887777775
No 285
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.66 E-value=0.76 Score=41.09 Aligned_cols=103 Identities=12% Similarity=0.104 Sum_probs=60.1
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeee-ecCCCCeEEEEECCC----CcEEEEEeCC-----CcEE
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI-NLERPGISGTSIRPD----SKIAATAGWD-----RRVR 332 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~-~~~~~~i~~~~~~p~----~~~l~s~~~d-----g~i~ 332 (383)
....+.+++++. ++.+..++.|.+++ + .+......... .........++|+|+ +...++-..+ .+|.
T Consensus 32 ~P~~ia~~pdG~-l~V~e~~g~I~~i~-~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGG-MLIAERPGRIRLFR-E-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSC-EEEEETTTEEEEEE-T-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCe-EEEEeCCCeEEEEE-C-CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 446788999887 55556778898887 2 22111111111 112356899999998 4444444432 6788
Q ss_pred EEEcCCCc-----eE-EEec---ccccceeEEEEeCCCCEEEEEe
Q 016769 333 IYNYRKGS-----AL-AILK---YHHATCNAVSFSSDCKLMASAS 368 (383)
Q Consensus 333 iwd~~~~~-----~~-~~~~---~h~~~v~~v~~spd~~~las~s 368 (383)
.|+...+. .+ ..+. +.......++|.|||.++++-+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 88886431 11 1132 1112346889999998777644
No 286
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.62 E-value=1.8 Score=36.66 Aligned_cols=143 Identities=13% Similarity=0.104 Sum_probs=83.5
Q ss_pred EEEEEeCCCcEEEEeCCCCCC--ceeeee------ccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCC--CCeeEEee
Q 016769 232 NVLAGYEDGSILVWDIRNPGI--PLTAMK------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS--TGSCVIKK 301 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~--~~~~~~------~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~--~~~~~~~~ 301 (383)
.+++.-.++.+.++++..... ...... ..+.....+++++.+..++.+.......+|.++.. +.......
T Consensus 83 ~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~ 162 (255)
T 3qqz_A 83 FVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISK 162 (255)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeec
Confidence 345544567788887765442 111111 12334578999999888777666555666665421 11111111
Q ss_pred e--e--ecCCCCeEEEEECCCC-cEEEEEeCCCcEEEEEcCCCceEEEec---cc------ccceeEEEEeCCCCEEEEE
Q 016769 302 E--I--NLERPGISGTSIRPDS-KIAATAGWDRRVRIYNYRKGSALAILK---YH------HATCNAVSFSSDCKLMASA 367 (383)
Q Consensus 302 ~--~--~~~~~~i~~~~~~p~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~---~h------~~~v~~v~~spd~~~las~ 367 (383)
. . ......+.+++++|.. ++++.....+.+..+|.. ++.+..+. +. ......|+|.|+|+++++
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv- 240 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV- 240 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-
T ss_pred chhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-
Confidence 1 0 1122457899999865 566666778888888875 55554332 21 125688999999996666
Q ss_pred eCCCcEEEE
Q 016769 368 SEDSTVALW 376 (383)
Q Consensus 368 s~d~~i~~w 376 (383)
|+-+.+..|
T Consensus 241 sE~n~~y~f 249 (255)
T 3qqz_A 241 SEPNRFYRF 249 (255)
T ss_dssp ETTTEEEEE
T ss_pred cCCceEEEE
Confidence 666655444
No 287
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.61 E-value=1.2 Score=41.78 Aligned_cols=135 Identities=10% Similarity=0.063 Sum_probs=80.0
Q ss_pred CCcEEEEeCCCCCCceeee-ec---cccCeEEEEE-------eCCCCceEEEEcCC-----c--EEEEEccCCCCeeEE-
Q 016769 239 DGSILVWDIRNPGIPLTAM-KV---HLEPVLCLSI-------DESCNGGISGGADQ-----K--IVLYNLDHSTGSCVI- 299 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~-~~---h~~~v~~~~~-------~~~~~~~~s~~~d~-----~--i~~wdl~~~~~~~~~- 299 (383)
.+.|++.|++... +..+ .. .......++| ++++..++.....+ . +.+.+.+. ++....
T Consensus 161 ~~~i~~ID~~~~~--v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~-~G~~~~~ 237 (496)
T 3kya_A 161 HKAIQLIDLKNRM--LSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNA-DGTFDDR 237 (496)
T ss_dssp EEEEEEEETTTTE--EEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCT-TSCCSTT
T ss_pred CCeEEEEECCCCE--EEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCC-CCceeec
Confidence 4678888887632 2222 21 1234788999 99988666665543 2 44444222 111110
Q ss_pred --eeeeecCCCCeEEEEECCC-CcEEEEEeCCCcEEEEEcC-------CCce--------------EEEecccccceeEE
Q 016769 300 --KKEINLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYR-------KGSA--------------LAILKYHHATCNAV 355 (383)
Q Consensus 300 --~~~~~~~~~~i~~~~~~p~-~~~l~s~~~dg~i~iwd~~-------~~~~--------------~~~~~~h~~~v~~v 355 (383)
...+. ......+++++|+ +.++++-..++.|+.+|+. ++.. +... +.......+
T Consensus 238 ~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~i 315 (496)
T 3kya_A 238 SDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQI 315 (496)
T ss_dssp SCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEE
T ss_pred ccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEE
Confidence 00111 1124568899995 5556666678889999997 4543 1122 122345789
Q ss_pred EEeCCCC-EEEEEeCCCcEEEEeC
Q 016769 356 SFSSDCK-LMASASEDSTVALWEL 378 (383)
Q Consensus 356 ~~spd~~-~las~s~d~~i~~w~~ 378 (383)
+|+|+|+ ++++=+....|+.+++
T Consensus 316 a~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 316 FIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEcCCCCEEEEEeCCCCEEEEEec
Confidence 9999999 5677777888888665
No 288
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.41 E-value=1.8 Score=39.83 Aligned_cols=143 Identities=8% Similarity=0.028 Sum_probs=85.6
Q ss_pred EEeCCCcEEEEeCCCCCCceeeeecc-ccCeEEEEEeCCCCceEEEE-cCCcEEEEEccCCCCee----EEeeeee----
Q 016769 235 AGYEDGSILVWDIRNPGIPLTAMKVH-LEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSC----VIKKEIN---- 304 (383)
Q Consensus 235 sg~~dg~i~~wdl~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~~~~----~~~~~~~---- 304 (383)
+-..++.|..+|..+.......+... ...-..+++++++..++.+. ..+.|..++++..++.. .+.....
T Consensus 245 ~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~ 324 (433)
T 4hw6_A 245 TRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGW 324 (433)
T ss_dssp CBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCC
T ss_pred EECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCcc
Confidence 34456778888876432201111111 12234699999988665544 46788888876433211 1110000
Q ss_pred -------cCCCCeEEEEE---------CCCCcEEEEEeCCCcEEEEEcCCCceEEEeccc------------------cc
Q 016769 305 -------LERPGISGTSI---------RPDSKIAATAGWDRRVRIYNYRKGSALAILKYH------------------HA 350 (383)
Q Consensus 305 -------~~~~~i~~~~~---------~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h------------------~~ 350 (383)
..-.....+++ .+++.++++-...++|+.++. ++.. .++.+. -.
T Consensus 325 ~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v-~t~~G~g~~~~~G~~dG~~~~~~~~~ 402 (433)
T 4hw6_A 325 VDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV-TTYAGRGNSREWGYVDGELRSQALFN 402 (433)
T ss_dssp BCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE-EEEECCCTTCSSCCBCEETTTTCBCS
T ss_pred CCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE-EEEEeCCCCCccccCCCccccccEeC
Confidence 01123667999 778888787777889999985 4543 333211 12
Q ss_pred ceeEEEEe-CCCCEEEEEeCCCcEEEEeCC
Q 016769 351 TCNAVSFS-SDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 351 ~v~~v~~s-pd~~~las~s~d~~i~~w~~~ 379 (383)
....|++. ++|.++++=..++.|+.+++.
T Consensus 403 ~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 403 HPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp SEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 46789999 778888888888889888763
No 289
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.10 E-value=0.5 Score=43.63 Aligned_cols=110 Identities=12% Similarity=0.065 Sum_probs=66.5
Q ss_pred CeEEEEEeC-CCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC-CC----cEEEEEc
Q 016769 263 PVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW-DR----RVRIYNY 336 (383)
Q Consensus 263 ~v~~~~~~~-~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~-dg----~i~iwd~ 336 (383)
....+++++ ....++.+...+.|+.+|++...... .. ........++|++++++|..+.. ++ .+.+++.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~----~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST----VY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE----EE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE----Ee-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 445788887 34456665555778888876432111 11 13346889999999995555554 22 3444444
Q ss_pred CCCceE--EEecccccceeEEEEeC-CCCEEEEEeCCCcEEEEeCC
Q 016769 337 RKGSAL--AILKYHHATCNAVSFSS-DCKLMASASEDSTVALWELY 379 (383)
Q Consensus 337 ~~~~~~--~~~~~h~~~v~~v~~sp-d~~~las~s~d~~i~~w~~~ 379 (383)
. +... ..+.. ......++++| +|.++++-..++.|..++..
T Consensus 213 ~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 213 E-SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp G-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred C-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 3 2211 22221 23456788999 77788877788888888864
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=93.91 E-value=3.1 Score=36.50 Aligned_cols=141 Identities=14% Similarity=0.005 Sum_probs=84.0
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc--CCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA--DQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~--d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
.++-...+.|.++++.... ....+.........+++++....++.... .+.|...+++........ .......
T Consensus 94 y~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~----~~~l~~P 168 (318)
T 3sov_A 94 YWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII----NSEIYWP 168 (318)
T ss_dssp EEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE----CSSCSCE
T ss_pred EEEECCCCEEEEEECCCCc-EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE----ECCCCCc
Confidence 3455567788888876422 12222233445678899986555554442 467888887643222111 1122457
Q ss_pred EEEEECCCCc-EEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 311 SGTSIRPDSK-IAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 311 ~~~~~~p~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++++++|+++ ..++=+..++|..+|++.........+.......+++.. +..+.+-...+.|..++..
T Consensus 169 nglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKY 237 (318)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred cEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECC
Confidence 8999998655 445555678999999964333322332344556777753 4566667777888888764
No 291
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.56 E-value=1.1 Score=40.02 Aligned_cols=102 Identities=15% Similarity=0.188 Sum_probs=58.6
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee-ee-ecCCCCeEEEEECCC----CcEEEEEeC---C----C
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK-EI-NLERPGISGTSIRPD----SKIAATAGW---D----R 329 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~-~~-~~~~~~i~~~~~~p~----~~~l~s~~~---d----g 329 (383)
....+++++++. ++.+..++.|.+++- ++...+.. .. .........++|+|+ +.+.++-+. + .
T Consensus 30 ~P~~ia~~pdG~-l~V~e~~g~I~~~d~---~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 30 VPWSIAPLGGGR-YLVTERPGRLVLISP---SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CEEEEEEEETTE-EEEEETTTEEEEECS---SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCeEEEEcCCCe-EEEEeCCCEEEEEeC---CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 345788888775 556667788888863 22211111 01 112356889999997 444444432 3 6
Q ss_pred cEEEEEcCCC-------ceE-EEec-ccccceeEEEEeCCCCEEEEEe
Q 016769 330 RVRIYNYRKG-------SAL-AILK-YHHATCNAVSFSSDCKLMASAS 368 (383)
Q Consensus 330 ~i~iwd~~~~-------~~~-~~~~-~h~~~v~~v~~spd~~~las~s 368 (383)
.|..|+.... +.+ ..+. +.......++|.|||+++++-+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 7888887643 111 1122 1112346789999999777644
No 292
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.43 E-value=0.77 Score=44.92 Aligned_cols=111 Identities=11% Similarity=0.037 Sum_probs=65.7
Q ss_pred EEEeC-CCCceEEEEcCC-----------cEEEEEccCCCCeeEEeeeeec-CCCCeEEEEECCCCcEEEEEeC-CCcEE
Q 016769 267 LSIDE-SCNGGISGGADQ-----------KIVLYNLDHSTGSCVIKKEINL-ERPGISGTSIRPDSKIAATAGW-DRRVR 332 (383)
Q Consensus 267 ~~~~~-~~~~~~s~~~d~-----------~i~~wdl~~~~~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~s~~~-dg~i~ 332 (383)
.++.+ .+..++.||.+. .+.+||....+...+ ..+.. ......+.++.++++.++.|+. +..+.
T Consensus 191 ~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~--~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 191 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDR--TVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCC--EEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeC--cccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 34444 445555665432 467788765443222 11211 1222445778889999999984 56899
Q ss_pred EEEcCCCceEEEeccc-ccceeEEEEeCCCCEEEEEe-CC-----CcEEEEeCC
Q 016769 333 IYNYRKGSALAILKYH-HATCNAVSFSSDCKLMASAS-ED-----STVALWELY 379 (383)
Q Consensus 333 iwd~~~~~~~~~~~~h-~~~v~~v~~spd~~~las~s-~d-----~~i~~w~~~ 379 (383)
+||..+.+-...-..+ .+.-.++++.+||++++.|+ .+ ..+.+||..
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 9999776432211111 22224456678999999998 44 568888874
No 293
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.18 E-value=4.7 Score=36.37 Aligned_cols=139 Identities=9% Similarity=-0.024 Sum_probs=84.5
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc-C-CcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-D-QKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~-d-~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
.++-...+.|.+.++.... ....+.........+++++....++.... . +.|...+++........ .......
T Consensus 174 Y~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~----~~~~~~P 248 (386)
T 3v65_B 174 YWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA----DTHLFWP 248 (386)
T ss_dssp EEEETTTTEEEECBTTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE----CSSCSCE
T ss_pred EEEcCCCCeEEEEeCCCCc-eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE----ECCCCCe
Confidence 4455667788888876422 22223333345678999987665554443 3 67888887643322211 1222357
Q ss_pred EEEEECCCCc-EEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 311 SGTSIRPDSK-IAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 311 ~~~~~~p~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
++++|+|+++ ++++-+..++|..+|++.......+.........+++ .++.++.+-...+.|..++
T Consensus 249 nGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred eeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 8999997655 4455556788999998654433333333445677787 3556777777788888877
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=92.87 E-value=7.2 Score=37.73 Aligned_cols=142 Identities=13% Similarity=0.039 Sum_probs=83.4
Q ss_pred EEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCCCeEE
Q 016769 234 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERPGISG 312 (383)
Q Consensus 234 ~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~ 312 (383)
++-...+.|..+++.........+.........+++|..+..++.+ ...+.|.+.+++......+.. .......+
T Consensus 56 ~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~----~~l~~P~~ 131 (619)
T 3s94_A 56 WSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW----QELDQPRA 131 (619)
T ss_dssp EEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----SSCSCCCC
T ss_pred EEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEe----CCCCCCce
Confidence 3444566777777754321122222223467789999866655544 456789999987543322221 22345778
Q ss_pred EEECCCCcEEEEEeC--CCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 313 TSIRPDSKIAATAGW--DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
+++.|.+.+|.-+.+ .+.|...+++-..........-...+.+++.|+++ ++.+=+..+.|...|+.
T Consensus 132 Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 132 IALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred EEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 999987655555554 36777777754333333333445678999998755 55555666778877763
No 295
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.86 E-value=3.3 Score=36.89 Aligned_cols=133 Identities=13% Similarity=0.063 Sum_probs=69.9
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeee---ccccCeEEEEEeCC---CCceEEEEc----C----CcEEEEEccCCCCe--
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMK---VHLEPVLCLSIDES---CNGGISGGA----D----QKIVLYNLDHSTGS-- 296 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~---~h~~~v~~~~~~~~---~~~~~s~~~----d----~~i~~wdl~~~~~~-- 296 (383)
++.+..+|.|+++|. .....+..+. ........++++++ ...++.+.. + +.|..|+++.....
T Consensus 42 l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~ 120 (354)
T 3a9g_A 42 YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLK 120 (354)
T ss_dssp EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEE
T ss_pred EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcC
Confidence 455556688888873 2211121111 11235678999987 344443332 3 56777777643111
Q ss_pred ---eEEeeeeecCCCCeEEEEECCCCcEEEEEeC-------------CCcEEEEEcCCC---------ceEEEecccccc
Q 016769 297 ---CVIKKEINLERPGISGTSIRPDSKIAATAGW-------------DRRVRIYNYRKG---------SALAILKYHHAT 351 (383)
Q Consensus 297 ---~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~-------------dg~i~iwd~~~~---------~~~~~~~~h~~~ 351 (383)
.++.............++|.|||.++++.+. .|+|..++.+.. ..+... +|.+
T Consensus 121 ~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~-G~rn- 198 (354)
T 3a9g_A 121 EVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSY-GHRN- 198 (354)
T ss_dssp EEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEE-CCSC-
T ss_pred ccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEE-ccCC-
Confidence 1111111111123567999999987776442 256666665421 122222 4544
Q ss_pred eeEEEEeC-CCCEEEEEe
Q 016769 352 CNAVSFSS-DCKLMASAS 368 (383)
Q Consensus 352 v~~v~~sp-d~~~las~s 368 (383)
...++|+| +|+++++-.
T Consensus 199 p~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 199 PQGIDWHRASGVMVATEH 216 (354)
T ss_dssp CCEEEECTTTCCEEEEEC
T ss_pred cceEEEeCCCCCEEEEec
Confidence 57899999 677666543
No 296
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.42 E-value=6.4 Score=36.00 Aligned_cols=138 Identities=12% Similarity=0.136 Sum_probs=86.4
Q ss_pred CCCcEEEEeCCCCCCceeeeecc----ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCC-Ce--------e-EEeeee
Q 016769 238 EDGSILVWDIRNPGIPLTAMKVH----LEPVLCLSIDESCNGGISGGADQKIVLYNLDHST-GS--------C-VIKKEI 303 (383)
Q Consensus 238 ~dg~i~~wdl~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~-~~--------~-~~~~~~ 303 (383)
.++.||.-++.... .++.++.. ...+..+..++++..++.. .+..|.+-.+-... .. . .....+
T Consensus 39 ~~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l 116 (452)
T 3pbp_A 39 QDNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLF-NDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSI 116 (452)
T ss_dssp ETTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEE-CSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEG
T ss_pred ECCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEe-cCCeEEEEEecCccccCcccccccccceeEEEc
Confidence 36788888877433 35555543 2356778899999877665 46678887775221 00 0 001111
Q ss_pred ec----CCCCeEEEEECCCC---cEEEEEeCCCcEEEEEcCCCc--eE--------EEecccccceeEEEEeCCCCE--E
Q 016769 304 NL----ERPGISGTSIRPDS---KIAATAGWDRRVRIYNYRKGS--AL--------AILKYHHATCNAVSFSSDCKL--M 364 (383)
Q Consensus 304 ~~----~~~~i~~~~~~p~~---~~l~s~~~dg~i~iwd~~~~~--~~--------~~~~~h~~~v~~v~~spd~~~--l 364 (383)
.. ....|..+.|||-+ ..|++-..|++||+||+.... +. .........|.+++|.+++=. +
T Consensus 117 ~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 117 DEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp GGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEE
T ss_pred CCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEE
Confidence 11 23569999999964 578888999999999997521 11 111223467899999997754 4
Q ss_pred EEEeCCCcEEEEe
Q 016769 365 ASASEDSTVALWE 377 (383)
Q Consensus 365 as~s~d~~i~~w~ 377 (383)
++.+++|.|+-.-
T Consensus 197 l~~t~~GDIYAlc 209 (452)
T 3pbp_A 197 LNTTEGGDIFAFY 209 (452)
T ss_dssp EECTTSCEEEEES
T ss_pred EecCCCCCEEEEC
Confidence 4455888775543
No 297
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.16 E-value=3.2 Score=38.45 Aligned_cols=105 Identities=16% Similarity=0.176 Sum_probs=57.3
Q ss_pred CeEEEEEeCCCCceEEEEcC-CcEEEEEccCCCCeeEEeeeee-----cCCCCeEEEEECCC----CcEEEEEeC-----
Q 016769 263 PVLCLSIDESCNGGISGGAD-QKIVLYNLDHSTGSCVIKKEIN-----LERPGISGTSIRPD----SKIAATAGW----- 327 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d-~~i~~wdl~~~~~~~~~~~~~~-----~~~~~i~~~~~~p~----~~~l~s~~~----- 327 (383)
....|++++++..+++ ... +.|.+++..... ...+..... ....+...++|+|+ +.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~-e~~gg~I~~~~~~~g~-~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 28 KPHALLWGPDNQIWLT-ERATGKILRVNPESGS-VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SEEEEEECTTSCEEEE-ETTTCEEEEECTTTCC-EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CceEEEEcCCCcEEEE-EcCCCEEEEEECCCCc-EeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 3457889998875444 455 468777643222 111111111 12456789999995 444444432
Q ss_pred -------CCcEEEEEcCCC-------ceEE-Eec-ccccceeEEEEeCCCCEEEEEeC
Q 016769 328 -------DRRVRIYNYRKG-------SALA-ILK-YHHATCNAVSFSSDCKLMASASE 369 (383)
Q Consensus 328 -------dg~i~iwd~~~~-------~~~~-~~~-~h~~~v~~v~~spd~~~las~s~ 369 (383)
...|..|+.... +.+. .+. ........++|.|||+++++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666766432 1111 121 11234788999999997776553
No 298
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=92.08 E-value=6.1 Score=35.01 Aligned_cols=139 Identities=9% Similarity=-0.015 Sum_probs=83.9
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEE-cC-CcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG-AD-QKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~-~d-~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
.++-...+.|.+.++.... ....+.........+++++....++... .. +.|...+++....... ........
T Consensus 131 y~~d~~~~~I~~~~~dG~~-~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~----~~~~~~~P 205 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII----ADTHLFWP 205 (349)
T ss_dssp EEEETTTTEEEEEETTSCS-CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES----CCSSCSCE
T ss_pred EEEcCCCCeEEEEcCCCCc-eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE----EECCCCCc
Confidence 4555667788888876432 2222223334567899998666554443 33 6788888764322111 11123457
Q ss_pred EEEEECCCCc-EEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEe
Q 016769 311 SGTSIRPDSK-IAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 377 (383)
Q Consensus 311 ~~~~~~p~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~ 377 (383)
++++++|+++ +.++-...++|..+|++.......+.........+++. ++..+.+-...+.|..++
T Consensus 206 nGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 206 NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred ceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEE
Confidence 8999998655 44554567889999987544333333334456777773 556667777777777776
No 299
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=90.78 E-value=10 Score=39.66 Aligned_cols=111 Identities=12% Similarity=0.106 Sum_probs=67.7
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCC------CcEEEEEeC-CCcEEEEE
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD------SKIAATAGW-DRRVRIYN 335 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~------~~~l~s~~~-dg~i~iwd 335 (383)
.|...+... ..++.+. ++.+.++.++..+ ........ ....|.++++.|. +++++.|.+ |++++|+.
T Consensus 515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~~--L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 515 NISVASCNS--SQVVVAV-GRALYYLQIHPQE--LRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp CCCEEEECS--SEEEEEE-TTEEEEEEEETTE--EEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred EEEEEEeCC--CEEEEEE-CCEEEEEEeeCCc--eeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence 455555443 2344443 6778788877532 11111222 2457999999764 369999998 99999999
Q ss_pred cCCCceEEEecc-cccceeEEEEe--CCCCEEEEEeCCCcEEEEeCC
Q 016769 336 YRKGSALAILKY-HHATCNAVSFS--SDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 336 ~~~~~~~~~~~~-h~~~v~~v~~s--pd~~~las~s~d~~i~~w~~~ 379 (383)
+++.+.+....- -.....++.+. ....+|..|-.||.+.-+.+.
T Consensus 589 L~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 589 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp TTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred CCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 988776643221 11233334332 223488999999988776654
No 300
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.72 E-value=1.5 Score=36.23 Aligned_cols=109 Identities=12% Similarity=0.064 Sum_probs=62.0
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCee--EE--eeeeec-CCCCeEEEEECCCCcEEEEEeCCCcEEEEEcC
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC--VI--KKEINL-ERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~--~~--~~~~~~-~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~ 337 (383)
.+..++|+|++. +... .++. ||..+..++.. .+ ...+.. .-.....+.|.|+|.+.++ .||+|+-++-.
T Consensus 42 ~~~~laf~P~G~-LYaV-~~G~--Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGGE-LYGV-LNDK--IYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTSC-EEEE-ETTE--EEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECCCcc-EEEE-eCCe--EEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 455889999766 4444 5664 55444332110 00 011100 1112467889999988776 57999888764
Q ss_pred CCceE------EEe-cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q 016769 338 KGSAL------AIL-KYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 338 ~~~~~------~~~-~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~ 381 (383)
+...- ..+ +.-=+.+..|.|.|+|.+.|.. |+. ++.-.+|
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~--lyr~~~P 162 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ--FYKALPP 162 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE--EEEECCC
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc--EEecCCC
Confidence 42111 111 1122467899999999988777 665 4445555
No 301
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.10 E-value=7.7 Score=34.44 Aligned_cols=106 Identities=14% Similarity=0.121 Sum_probs=59.7
Q ss_pred cCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee--e-ecCCCCeEEEEECCC----CcEEEEEe--CCCcEE
Q 016769 262 EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE--I-NLERPGISGTSIRPD----SKIAATAG--WDRRVR 332 (383)
Q Consensus 262 ~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~--~-~~~~~~i~~~~~~p~----~~~l~s~~--~dg~i~ 332 (383)
.....|++.+++..+++--..+.|++++.+..... .+... . .....+...++|+|+ +.+.++-+ .+++|.
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~-~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKT-ELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEe-eecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 34567889888875454433888888864332211 11110 1 123457899999995 44444333 456677
Q ss_pred EEEcCCC----------ceE-EEec-ccccceeEEEEeCCCCEEEEEe
Q 016769 333 IYNYRKG----------SAL-AILK-YHHATCNAVSFSSDCKLMASAS 368 (383)
Q Consensus 333 iwd~~~~----------~~~-~~~~-~h~~~v~~v~~spd~~~las~s 368 (383)
-|.+..+ +.+ ..+. +.......++|.|||.++++.+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 7766541 111 1221 1122356789999999777754
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=90.05 E-value=1.4 Score=43.56 Aligned_cols=141 Identities=11% Similarity=-0.026 Sum_probs=78.9
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc--CCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA--DQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~--d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
.++-...+.|.++++.... ....+.........+++++.+..++.... .+.|.+.+++......+. .......
T Consensus 468 Y~tD~~~~~I~v~d~dg~~-~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~----~~~l~~P 542 (699)
T 1n7d_A 468 YWTDSVLGTVSVADTKGVK-RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV----TENIQWP 542 (699)
T ss_dssp EECCTTTSCEEEEBSSSCC-EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEES----CSSCSSC
T ss_pred EEEeccCCeEEEEecCCCc-eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEE----eCCCCCc
Confidence 3444556788888876422 12222222234467788876555544332 267777776543221111 1122346
Q ss_pred EEEEECCCC-cEEEEEeCCCcEEEEEcCCCceEEEecc--cccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 311 SGTSIRPDS-KIAATAGWDRRVRIYNYRKGSALAILKY--HHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 311 ~~~~~~p~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
++++|+|++ +++++-+..++|..+|++.......+.. .......+++..+ .++++....+.|..++..
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 789999875 4555556678999999964333322221 1223445566544 566667777888888753
No 303
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.60 E-value=9.1 Score=35.52 Aligned_cols=109 Identities=8% Similarity=0.039 Sum_probs=61.0
Q ss_pred CeEEEEEeCCCC-ceEEEEcCCcEEEEEccCCCC-eeEEee-e-ee-----cCCCCeEEEEECCC----CcEEEEEeCC-
Q 016769 263 PVLCLSIDESCN-GGISGGADQKIVLYNLDHSTG-SCVIKK-E-IN-----LERPGISGTSIRPD----SKIAATAGWD- 328 (383)
Q Consensus 263 ~v~~~~~~~~~~-~~~s~~~d~~i~~wdl~~~~~-~~~~~~-~-~~-----~~~~~i~~~~~~p~----~~~l~s~~~d- 328 (383)
.-..|+|.+++. .++.+...|.|++++-+.... ...... . .. ....+...++|+|+ +.+.++-+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 445788888875 466677889999886432110 111100 0 10 11357889999997 5555544421
Q ss_pred -----------CcEEEEEcCC----------CceEEEec--ccccceeEEEEeCCCCEEEEEeCCC
Q 016769 329 -----------RRVRIYNYRK----------GSALAILK--YHHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 329 -----------g~i~iwd~~~----------~~~~~~~~--~h~~~v~~v~~spd~~~las~s~d~ 371 (383)
.+|.-|.+.. .+.+..+. ........|+|.|||++.++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1455566642 12222221 1123467899999999777666544
No 304
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=89.37 E-value=4.9 Score=35.74 Aligned_cols=107 Identities=9% Similarity=0.092 Sum_probs=57.9
Q ss_pred CeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEee-ee-ecCCCCeEEEEECCC----CcEEEEEeC-------CC
Q 016769 263 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK-EI-NLERPGISGTSIRPD----SKIAATAGW-------DR 329 (383)
Q Consensus 263 ~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~-~~-~~~~~~i~~~~~~p~----~~~l~s~~~-------dg 329 (383)
....|.+++++..++.+...+.|++++-+.......... .. .....+...++|+|+ +.+.++-+. ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 446788999887455666788888887431100000000 01 112346789999995 544444333 23
Q ss_pred cEEEEEcCCC--c--eEE-Eecc------cccceeEEEEeCCCCEEEEEeC
Q 016769 330 RVRIYNYRKG--S--ALA-ILKY------HHATCNAVSFSSDCKLMASASE 369 (383)
Q Consensus 330 ~i~iwd~~~~--~--~~~-~~~~------h~~~v~~v~~spd~~~las~s~ 369 (383)
+|..|++... + ... .+.. .......++|.|||.++++-+.
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 6777777532 1 111 1111 1112467899999986666543
No 305
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=89.10 E-value=18 Score=35.87 Aligned_cols=143 Identities=12% Similarity=0.030 Sum_probs=83.9
Q ss_pred EEEEEeCCCcEEEEeCCCCCCce-ee------------eeccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeE
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPL-TA------------MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCV 298 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~-~~------------~~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~ 298 (383)
.+-.|+..+-|.++|..+..... .. .......|.++..|..+. +-.|+.++.|..++.....-...
T Consensus 270 ~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~ 348 (781)
T 3v9f_A 270 KLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTW 348 (781)
T ss_dssp EEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEE
T ss_pred CEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceee
Confidence 46667775678888876532110 00 011234688888888764 56777788888887654322111
Q ss_pred Eee-----eeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe----cccccceeEEEEeCCCCEEEEEeC
Q 016769 299 IKK-----EINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL----KYHHATCNAVSFSSDCKLMASASE 369 (383)
Q Consensus 299 ~~~-----~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~h~~~v~~v~~spd~~~las~s~ 369 (383)
... ........|.++...+++.+ ..|+.++-|..||..++... .+ ......|.++...++|++.+ |+.
T Consensus 349 ~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~ 425 (781)
T 3v9f_A 349 SYSPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINVFENGKRVAI-YNKENRELLSNSVLCSLKDSEGNLWF-GTY 425 (781)
T ss_dssp C----CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEEEETTEEEEE-CC-----CCCSBEEEEEECTTSCEEE-EET
T ss_pred ccCccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEEEECCCCeEE-EccCCCCCCCcceEEEEECCCCCEEE-Eec
Confidence 000 01112346888988888865 45665666888998654322 11 12345788888888887655 565
Q ss_pred CCcEEEEeC
Q 016769 370 DSTVALWEL 378 (383)
Q Consensus 370 d~~i~~w~~ 378 (383)
++-+..+|.
T Consensus 426 ~~Gl~~~~~ 434 (781)
T 3v9f_A 426 LGNISYYNT 434 (781)
T ss_dssp TEEEEEECS
T ss_pred cCCEEEEcC
Confidence 555666654
No 306
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=89.04 E-value=15 Score=34.40 Aligned_cols=148 Identities=9% Similarity=0.076 Sum_probs=89.6
Q ss_pred EEEEEeCCCcEEEEeCC-------CCCC-----c-----eee-eec-cccCeEEEEEeCCCCceEEE-EcCCcEEEEEcc
Q 016769 232 NVLAGYEDGSILVWDIR-------NPGI-----P-----LTA-MKV-HLEPVLCLSIDESCNGGISG-GADQKIVLYNLD 291 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~-------~~~~-----~-----~~~-~~~-h~~~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~ 291 (383)
..++-..++.|..+|+. +... + ... +.. .......+++++++..++.+ ...+.|+.++.+
T Consensus 261 LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 261 LYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 34556778889999986 3322 0 111 111 12335789999999865544 456778887776
Q ss_pred CCCCee----EEeeeeec-----------CCCCeE-EEEEC-------CCCcEEEEEeCCCcEEEEEcCCCceEEEeccc
Q 016769 292 HSTGSC----VIKKEINL-----------ERPGIS-GTSIR-------PDSKIAATAGWDRRVRIYNYRKGSALAILKYH 348 (383)
Q Consensus 292 ~~~~~~----~~~~~~~~-----------~~~~i~-~~~~~-------p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h 348 (383)
...... .+.-.... .-.... .+++. +++.++++=..+.+|+.++ .++. +.++-+.
T Consensus 341 g~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~ 418 (496)
T 3kya_A 341 EIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGR 418 (496)
T ss_dssp TTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEES
T ss_pred CCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecc
Confidence 443221 11110000 001234 45554 5677777777889999998 4554 4344221
Q ss_pred ------------------------ccceeEEEEeCC-CCEEEEEeCCCcEEEEeCCCC
Q 016769 349 ------------------------HATCNAVSFSSD-CKLMASASEDSTVALWELYPP 381 (383)
Q Consensus 349 ------------------------~~~v~~v~~spd-~~~las~s~d~~i~~w~~~~~ 381 (383)
-.....|++.++ |.++++=+.+..|+.+++..+
T Consensus 419 g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 419 GASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp CTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred cccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 124678999997 888888888999999988654
No 307
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=88.18 E-value=7.3 Score=32.16 Aligned_cols=111 Identities=15% Similarity=0.049 Sum_probs=60.4
Q ss_pred eEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEE---eeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCCc
Q 016769 264 VLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVI---KKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS 340 (383)
Q Consensus 264 v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~---~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~ 340 (383)
-..+.||+++...++ .|+.|..++--+......+ .+.....=..+..+.|.|+|...+.. |++++-....+..
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~ 165 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSN 165 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSST
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCC
Confidence 356788988865444 6788876652111111000 00001111357889999999877765 8886543333211
Q ss_pred ------eEEEec-ccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCCCC
Q 016769 341 ------ALAILK-YHHATCNAVSFSSDCKLMASASEDSTVALWELYPPH 382 (383)
Q Consensus 341 ------~~~~~~-~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~~~ 382 (383)
....+. ..-+.-..+.|.|++.+.+.. ++ ++|...+|.
T Consensus 166 ~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g--~~Y~~~~p~ 210 (236)
T 1tl2_A 166 QDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG--KFYEDYPPS 210 (236)
T ss_dssp TCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT--EEEEESCCC
T ss_pred CcccccccceeccCCcceEEEEEECCCCcEEEEe--CC--eEEecCCcc
Confidence 011111 112223346699999877665 66 777777664
No 308
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=87.50 E-value=14 Score=34.08 Aligned_cols=115 Identities=21% Similarity=0.192 Sum_probs=61.4
Q ss_pred cCeEEEEEeCC---CCceEEEE-c------------CCcEEEEEccCCCCee-----EEeeeeecCCCCeEEEEECCCCc
Q 016769 262 EPVLCLSIDES---CNGGISGG-A------------DQKIVLYNLDHSTGSC-----VIKKEINLERPGISGTSIRPDSK 320 (383)
Q Consensus 262 ~~v~~~~~~~~---~~~~~s~~-~------------d~~i~~wdl~~~~~~~-----~~~~~~~~~~~~i~~~~~~p~~~ 320 (383)
.-...++++|+ ...++.+. . ...|..++++...... ++.............++|.|||+
T Consensus 77 ~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~ 156 (454)
T 1cru_A 77 NGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK 156 (454)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC
T ss_pred CceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe
Confidence 34568999985 34443332 1 2356666665432211 11111111223578999999999
Q ss_pred EEEEEeCC--------------------------------CcEEEEEcCCCc-----------eEEEec-ccccceeEEE
Q 016769 321 IAATAGWD--------------------------------RRVRIYNYRKGS-----------ALAILK-YHHATCNAVS 356 (383)
Q Consensus 321 ~l~s~~~d--------------------------------g~i~iwd~~~~~-----------~~~~~~-~h~~~v~~v~ 356 (383)
+.++.+.. |+|.-++.+ ++ ....+. +|. ....++
T Consensus 157 Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~d-G~ip~~Npf~~~~~~ei~a~G~R-Np~gla 234 (454)
T 1cru_A 157 IYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLD-GSIPKDNPSFNGVVSHIYTLGHR-NPQGLA 234 (454)
T ss_dssp EEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTT-SCCCTTCCEETTEECSEEEBCCS-EEEEEE
T ss_pred EEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCC-CCCCCCCCCCCCCcceEEEECCC-CcceEE
Confidence 77765532 445444443 22 112222 454 468899
Q ss_pred EeCCCCEEEE-EeCCCcEEEEeC
Q 016769 357 FSSDCKLMAS-ASEDSTVALWEL 378 (383)
Q Consensus 357 ~spd~~~las-~s~d~~i~~w~~ 378 (383)
|.|+|++.++ -+.|+.-+|.-+
T Consensus 235 ~dp~G~L~~~d~g~~~~dein~i 257 (454)
T 1cru_A 235 FTPNGKLLQSEQGPNSDDEINLI 257 (454)
T ss_dssp ECTTSCEEEEEECSSSCEEEEEC
T ss_pred ECCCCCEEEEecCCCCCeEEEEe
Confidence 9999886554 444544444433
No 309
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=85.30 E-value=19 Score=31.82 Aligned_cols=133 Identities=14% Similarity=0.104 Sum_probs=71.6
Q ss_pred EEEEeC-CCcEEEEeCCCCCC-ceeee----eccccCeEEEEEeCC---CCceEEE---EcCCcEEEEEccCCC------
Q 016769 233 VLAGYE-DGSILVWDIRNPGI-PLTAM----KVHLEPVLCLSIDES---CNGGISG---GADQKIVLYNLDHST------ 294 (383)
Q Consensus 233 ~~sg~~-dg~i~~wdl~~~~~-~~~~~----~~h~~~v~~~~~~~~---~~~~~s~---~~d~~i~~wdl~~~~------ 294 (383)
++.... .|.|++++...... .+..+ .........++++|+ ...++.. ..+++|..|.++...
T Consensus 45 llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~ 124 (347)
T 3das_A 45 LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQL 124 (347)
T ss_dssp EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCB
T ss_pred EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccC
Confidence 444444 78888887543221 11111 112345678999885 2233322 245667777765421
Q ss_pred --CeeEEeeeeecCCCCeEEEEECCCCcEEEEEeC-------------CCcEEEEEcCCC---------ceEEEeccccc
Q 016769 295 --GSCVIKKEINLERPGISGTSIRPDSKIAATAGW-------------DRRVRIYNYRKG---------SALAILKYHHA 350 (383)
Q Consensus 295 --~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~-------------dg~i~iwd~~~~---------~~~~~~~~h~~ 350 (383)
...++.............+.|.|||.+.++.+. .|+|.-++.+.. ..+... +|.+
T Consensus 125 ~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~-G~RN 203 (347)
T 3das_A 125 GAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSY-GHRN 203 (347)
T ss_dssp CCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEB-CCSB
T ss_pred CCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEee-CCCC
Confidence 112221111111223567999999987776542 466666665422 123222 5654
Q ss_pred ceeEEEEeCCCCEEEEE
Q 016769 351 TCNAVSFSSDCKLMASA 367 (383)
Q Consensus 351 ~v~~v~~spd~~~las~ 367 (383)
...++|+|+|++.++-
T Consensus 204 -p~Gla~dp~G~L~~~d 219 (347)
T 3das_A 204 -VQGLAWDDKQRLFASE 219 (347)
T ss_dssp -CCEEEECTTCCEEEEE
T ss_pred -cceEEECCCCCEEEEe
Confidence 5789999998876653
No 310
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=84.78 E-value=42 Score=35.19 Aligned_cols=132 Identities=14% Similarity=0.200 Sum_probs=78.6
Q ss_pred CCCcEEEEeCCCCCCceeee--eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEE
Q 016769 238 EDGSILVWDIRNPGIPLTAM--KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSI 315 (383)
Q Consensus 238 ~dg~i~~wdl~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~ 315 (383)
..|.|.+|++...+ +..+ +...+++.++.--. + .+.++..+.+++|++..... +....... ..+..+.+
T Consensus 862 ~~Gri~vf~v~~~k--L~lv~~~~v~g~v~al~~~~-g--~Lla~ig~~l~vy~l~~~~~---L~~~~~~~-~~i~~~~l 932 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGK--LQTVAEKEVKGAVYSMVEFN-G--KLLASINSTVRLYEWTTEKE---LRTECNHY-NNIMALYL 932 (1158)
T ss_dssp CCEEEEEEEEETTE--EEEEEEEEESSCEEEEEEET-T--EEEEEETTEEEEEEECTTSC---EEEEEEEC-CCSCEEEE
T ss_pred CceEEEEEEEECCE--EEEEEEEEcCCcCEEEeeeC-C--EEEEEcCCEEEEEECCCCce---EEEEeecc-ccEEEEEE
Confidence 35789999986322 2222 12245777766432 2 34455678999999975431 11111111 11223333
Q ss_pred CCCCcEEEEEeCCCcEEEEEc--CCCceEEEe--cccccceeEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q 016769 316 RPDSKIAATAGWDRRVRIYNY--RKGSALAIL--KYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 380 (383)
Q Consensus 316 ~p~~~~l~s~~~dg~i~iwd~--~~~~~~~~~--~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~~ 380 (383)
...+.+++.|..-+.|.++.. ..++ +..+ ..+...+.++.|--+ ..++.+..+|.+.+....+
T Consensus 933 ~~~~~~I~vgD~~~Sv~~~~y~~~~~~-L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 933 KTKGDFILVGDLMRSVLLLAYKPMEGN-FEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEETTEEEEEESSBCEEEEEEETTTTE-EEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECT
T ss_pred eccCCEEEEEEhhheEEEEEEEcCCCe-EEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCC
Confidence 335678888888888877544 3333 3333 235678888888644 5788899999999988753
No 311
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=82.84 E-value=39 Score=33.41 Aligned_cols=138 Identities=14% Similarity=0.083 Sum_probs=81.3
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeee----eccccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeeeeecCCC
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAM----KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 308 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~~~~~~~ 308 (383)
+-.|+.++-|..||..+.. ...+ ......|.++..+..+. +..|+.++.+..+|.+. +.............
T Consensus 376 lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~--~~~~~~~~~~~~~~ 450 (781)
T 3v9f_A 376 LWIGTDGGGINVFENGKRV--AIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRL--KKFQIIELEKNELL 450 (781)
T ss_dssp EEEEEBSSCEEEEETTEEE--EECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSS--CEEEECCSTTTCCC
T ss_pred EEEEeCCCcEEEEECCCCe--EEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCC--CcEEEeccCCCCCC
Confidence 6667777778889865421 1111 11235678888887654 55666667788886543 22211100012235
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEeccc-----ccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH-----HATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h-----~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.|.++...+++++.+ |+. +-+..||..+++........ ...|.++...++|++.+....+| +..||.
T Consensus 451 ~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~ 522 (781)
T 3v9f_A 451 DVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTP 522 (781)
T ss_dssp CEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECT
T ss_pred eEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeC
Confidence 688888888887554 555 45888998776543222111 35788998888888665444344 555654
No 312
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=82.37 E-value=26 Score=30.97 Aligned_cols=132 Identities=7% Similarity=0.004 Sum_probs=66.7
Q ss_pred EEEEeCCCcEEEEeCCCCC-Cceeee----eccccCeEEEEEeCC---CCceEEE-Ec-------CCcEEEEEccCCCCe
Q 016769 233 VLAGYEDGSILVWDIRNPG-IPLTAM----KVHLEPVLCLSIDES---CNGGISG-GA-------DQKIVLYNLDHSTGS 296 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~-~~~~~~----~~h~~~v~~~~~~~~---~~~~~s~-~~-------d~~i~~wdl~~~~~~ 296 (383)
++.+...|.|++++..... ..+..+ .........++++++ ...++.+ .. ...|..++++.....
T Consensus 32 l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~ 111 (353)
T 2g8s_A 32 MLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSK 111 (353)
T ss_dssp EEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSB
T ss_pred EEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCC
Confidence 4445557888888743210 011111 111234578899885 3334333 22 235666776543221
Q ss_pred eEEee----eee---cCCCCeEEEEECCCCcEEEEEeC-------------CCcEEEEEcCCC--------------ceE
Q 016769 297 CVIKK----EIN---LERPGISGTSIRPDSKIAATAGW-------------DRRVRIYNYRKG--------------SAL 342 (383)
Q Consensus 297 ~~~~~----~~~---~~~~~i~~~~~~p~~~~l~s~~~-------------dg~i~iwd~~~~--------------~~~ 342 (383)
..... .+. ........++|.|||.+.++.+. .|+|.-+|.+.. ..+
T Consensus 112 ~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i 191 (353)
T 2g8s_A 112 VTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEI 191 (353)
T ss_dssp EEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTE
T ss_pred CCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccE
Confidence 11111 111 11122467999999976666543 246777776532 112
Q ss_pred EEecccccceeEEEEeC-CCCEEEE
Q 016769 343 AILKYHHATCNAVSFSS-DCKLMAS 366 (383)
Q Consensus 343 ~~~~~h~~~v~~v~~sp-d~~~las 366 (383)
... +|. ....++|.| +|+++++
T Consensus 192 ~a~-G~r-np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 192 WSY-GIR-NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp EEE-CCS-EEEEEEEETTTTEEEEE
T ss_pred EEE-cCc-CccceEEECCCCCEEEE
Confidence 222 444 468899999 6665554
No 313
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=81.65 E-value=28 Score=30.90 Aligned_cols=126 Identities=13% Similarity=0.130 Sum_probs=70.1
Q ss_pred CCcEEEEeCCCCCCcee---eeecc-ccCeEEEEEeCCCCceEEEE---cC------------CcEEEEEccCCCCeeEE
Q 016769 239 DGSILVWDIRNPGIPLT---AMKVH-LEPVLCLSIDESCNGGISGG---AD------------QKIVLYNLDHSTGSCVI 299 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~---~~~~h-~~~v~~~~~~~~~~~~~s~~---~d------------~~i~~wdl~~~~~~~~~ 299 (383)
+++|.+|++........ .+.+. ....+.+.+++++...++.. .| ..=.+|-++..+.....
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~ 217 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVA 217 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEE
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEee
Confidence 67888888765332222 22211 23457788888775434332 01 12244444433222111
Q ss_pred eeeeecCCCCeEEEEECCCCcEEEEE-eCCCcEEEEEcCC-Cce--EEEecccccceeEEEEeC-CCCEEEEEeCC
Q 016769 300 KKEINLERPGISGTSIRPDSKIAATA-GWDRRVRIYNYRK-GSA--LAILKYHHATCNAVSFSS-DCKLMASASED 370 (383)
Q Consensus 300 ~~~~~~~~~~i~~~~~~p~~~~l~s~-~~dg~i~iwd~~~-~~~--~~~~~~h~~~v~~v~~sp-d~~~las~s~d 370 (383)
. .-...++++|+||++++..+ +..++|..|+++. ++. ...+ ......-.+++.+ +|++.+++..+
T Consensus 218 -~----~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 218 -E----GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp -E----EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred -c----CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 1 11347899999999765544 4678999999964 322 1223 2234566778888 58877766544
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=81.08 E-value=25 Score=29.89 Aligned_cols=91 Identities=15% Similarity=0.216 Sum_probs=46.2
Q ss_pred CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC-----CcEEEEEcCCCceEE--EecccccceeEE
Q 016769 283 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALA--ILKYHHATCNAV 355 (383)
Q Consensus 283 ~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d-----g~i~iwd~~~~~~~~--~~~~h~~~v~~v 355 (383)
..+.+||+...+ ......+.........+.+ +++.++.|+.+ ..+.+||+.+.+=.. .+. ....-.++
T Consensus 173 ~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~ 247 (302)
T 2xn4_A 173 STVECYNATTNE--WTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN-MCRRNAGV 247 (302)
T ss_dssp CCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS-SCCBSCEE
T ss_pred cEEEEEeCCCCc--EEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC-CccccCeE
Confidence 346777775432 2221222222222233333 56777777764 368899997754221 111 11111122
Q ss_pred EEeCCCCEEEEEeCCC-----cEEEEeCC
Q 016769 356 SFSSDCKLMASASEDS-----TVALWELY 379 (383)
Q Consensus 356 ~~spd~~~las~s~d~-----~i~~w~~~ 379 (383)
+. -++++++.|+.++ .|.+||+.
T Consensus 248 ~~-~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 248 CA-VNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp EE-ETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred EE-ECCEEEEECCcCCCcccccEEEEcCC
Confidence 22 3678888888664 37777763
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=80.86 E-value=25 Score=29.81 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=49.6
Q ss_pred ceEEEEcC-----CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC-----CcEEEEEcCCCceEEE
Q 016769 275 GGISGGAD-----QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALAI 344 (383)
Q Consensus 275 ~~~s~~~d-----~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d-----g~i~iwd~~~~~~~~~ 344 (383)
.++.||.+ ..+.+||+...+ ......+.........+.+ +++.++.|+.+ ..+.+||+.+.+-...
T Consensus 162 iyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 237 (301)
T 2vpj_A 162 IYCLGGYDGLNILNSVEKYDPHTGH--WTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV 237 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred EEEECCCCCCcccceEEEEeCCCCc--EEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEEC
Confidence 34455543 446777776432 2211122222222233333 56777777764 4688999987643221
Q ss_pred ecc-cccceeEEEEeCCCCEEEEEeCCC-----cEEEEeCC
Q 016769 345 LKY-HHATCNAVSFSSDCKLMASASEDS-----TVALWELY 379 (383)
Q Consensus 345 ~~~-h~~~v~~v~~spd~~~las~s~d~-----~i~~w~~~ 379 (383)
-.. ....-.++. .-++++++.|+.++ .|.+||+.
T Consensus 238 ~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 238 TSMTTPRCYVGAT-VLRGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp CCCSSCCBSCEEE-EETTEEEEECCBCSSSBEEEEEEEETT
T ss_pred CCCCCcccceeEE-EECCEEEEEcCcCCCcccccEEEEcCC
Confidence 110 111111222 22678888887663 46666653
No 316
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=80.38 E-value=11 Score=33.50 Aligned_cols=68 Identities=13% Similarity=0.115 Sum_probs=43.4
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCce--EEEec---ccccceeEEEEeCC----CCEEEEEeCC-----CcEE
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA--LAILK---YHHATCNAVSFSSD----CKLMASASED-----STVA 374 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~---~h~~~v~~v~~spd----~~~las~s~d-----~~i~ 374 (383)
....++|.|+|+++++ ..+++|++++ .++. +..+. ........++|+|| +...++-+.+ +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4678999999996654 5679999998 4432 21111 12346789999998 4455554432 4566
Q ss_pred EEeCC
Q 016769 375 LWELY 379 (383)
Q Consensus 375 ~w~~~ 379 (383)
.|++.
T Consensus 109 r~~~~ 113 (352)
T 2ism_A 109 RLRHL 113 (352)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 66553
No 317
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=79.12 E-value=31 Score=29.90 Aligned_cols=107 Identities=5% Similarity=-0.004 Sum_probs=59.9
Q ss_pred cccCeEEEEEeCCCCceEEEEcCCcEEE-EEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCC
Q 016769 260 HLEPVLCLSIDESCNGGISGGADQKIVL-YNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK 338 (383)
Q Consensus 260 h~~~v~~~~~~~~~~~~~s~~~d~~i~~-wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~ 338 (383)
+...+..+.+++.+..++ .+.++.+.. +|-...+-.. ........+..+.+.++++.++ ++.+|.+++.+.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~-~g~~G~~~~S~d~gG~tW~~----~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~ 234 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGEYVA-VSSRGSFYSTWEPGQTAWEP----HNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDN 234 (327)
T ss_dssp CCCCEEEEEECTTSCEEE-EETTSSEEEEECTTCSSCEE----EECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTE
T ss_pred CCcceEEEEEcCCCcEEE-EECCCcEEEEeCCCCCceeE----CCCCCCCccceeEECCCCCEEE-EeCCceEEEecCCC
Confidence 344677888887765544 445555433 3321111111 1112234678888999887654 56788887765332
Q ss_pred CceEEEec-c---cccceeEEEEeCCCCEEEEEeCCCcE
Q 016769 339 GSALAILK-Y---HHATCNAVSFSSDCKLMASASEDSTV 373 (383)
Q Consensus 339 ~~~~~~~~-~---h~~~v~~v~~spd~~~las~s~d~~i 373 (383)
++.-..+. . +...+.++++.|++..++.+. ++.|
T Consensus 235 G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 235 SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred CCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 33222221 1 223588899998888777665 5555
No 318
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=78.67 E-value=41 Score=30.98 Aligned_cols=66 Identities=8% Similarity=0.049 Sum_probs=44.8
Q ss_pred EEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 313 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 313 ~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+.+++-...+..-+.-|.|++||++++..+..-+=-.+.|...+-+.+..=++...+.|.|.--.+
T Consensus 264 mqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 264 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCV 329 (494)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEE
T ss_pred EEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEE
Confidence 334444456777788999999999999998766545666766666555555555567776654443
No 319
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=76.75 E-value=56 Score=31.54 Aligned_cols=138 Identities=10% Similarity=-0.062 Sum_probs=84.2
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEEEc--CCcEEEEEccCCCCeeEEeeeeecCCCCe
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA--DQKIVLYNLDHSTGSCVIKKEINLERPGI 310 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~~~--d~~i~~wdl~~~~~~~~~~~~~~~~~~~i 310 (383)
.++-...+.|.+.++..... ...+.........++++|....++-... .+.|...+++........ ......
T Consensus 95 Y~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-----~~~~~P 168 (628)
T 4a0p_A 95 YWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-----PNVGRA 168 (628)
T ss_dssp EEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-----CSCSSE
T ss_pred EEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-----CCCCCc
Confidence 34556677888888764322 1222233345678999986555555442 467777777654432222 123468
Q ss_pred EEEEECCCCc-EEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 311 SGTSIRPDSK-IAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 311 ~~~~~~p~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
+++++.++++ ..++-...++|..+|++.... ..+.........+++.. ++.+.+-...+.|...|.
T Consensus 169 ~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANK 235 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred ceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEEC
Confidence 8999998755 445555678999999965443 33333334456777765 456666666788877774
No 320
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=74.90 E-value=41 Score=29.11 Aligned_cols=111 Identities=8% Similarity=-0.053 Sum_probs=64.7
Q ss_pred ccCeEEEEEeCCCCceEEEEcCCcEEEEEccCCCCeeEEeee-ee--cCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcC
Q 016769 261 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE-IN--LERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 337 (383)
Q Consensus 261 ~~~v~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~~~~~~~~~-~~--~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~ 337 (383)
...+..+.+++.+. ++..+.++.+.+.+.+ .+.. .... .. .....+..+.+.+++..+++ +.++.| ++..+
T Consensus 204 ~~~~~~~~~~~~g~-~~~~~~~G~~~~s~~D--~G~t-W~~~~~~~~~~~~~~~~v~~~~~~~~~~~-g~~g~i-~~S~D 277 (327)
T 2xbg_A 204 SRRLHNMGFTPDGR-LWMIVNGGKIAFSDPD--NSEN-WGELLSPLRRNSVGFLDLAYRTPNEVWLA-GGAGAL-LCSQD 277 (327)
T ss_dssp SSCEEEEEECTTSC-EEEEETTTEEEEEETT--EEEE-ECCCBCTTSSCCSCEEEEEESSSSCEEEE-ESTTCE-EEESS
T ss_pred CCccceeEECCCCC-EEEEeCCceEEEecCC--CCCe-eEeccCCcccCCcceEEEEecCCCEEEEE-eCCCeE-EEeCC
Confidence 34667777877664 4556677777665321 0111 1111 01 11235788889988776665 457777 34555
Q ss_pred CCceEEEecc---cccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 338 KGSALAILKY---HHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 338 ~~~~~~~~~~---h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.++.-..+.. +...+.++.|.+++ .++.++.+|.|.-++-
T Consensus 278 gG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 278 GGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYVT 320 (327)
T ss_dssp TTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEECC
T ss_pred CCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEcC
Confidence 5554443432 34567889997555 4666777887776653
No 321
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=72.95 E-value=42 Score=28.33 Aligned_cols=91 Identities=14% Similarity=0.211 Sum_probs=45.5
Q ss_pred cEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC-----CcEEEEEcCCCceEEEec-ccccceeEEEE
Q 016769 284 KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALAILK-YHHATCNAVSF 357 (383)
Q Consensus 284 ~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~-~h~~~v~~v~~ 357 (383)
.+.+||+...+ ......+......-..+.+ +++.++.|+.+ ..+.+||+.+.+=...-. .....-.+++.
T Consensus 129 ~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 204 (301)
T 2vpj_A 129 SMERYDPNIDQ--WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL 204 (301)
T ss_dssp EEEEEETTTTE--EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred eEEEEcCCCCe--EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE
Confidence 46677765433 2222222222222223333 66777777765 458889987764322111 11111112222
Q ss_pred eCCCCEEEEEeCC-----CcEEEEeCC
Q 016769 358 SSDCKLMASASED-----STVALWELY 379 (383)
Q Consensus 358 spd~~~las~s~d-----~~i~~w~~~ 379 (383)
-++++++.|+.+ ..+.+||+.
T Consensus 205 -~~~~i~v~GG~~~~~~~~~v~~yd~~ 230 (301)
T 2vpj_A 205 -LNDHIYVVGGFDGTAHLSSVEAYNIR 230 (301)
T ss_dssp -ETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred -ECCEEEEEeCCCCCcccceEEEEeCC
Confidence 267788888765 357777764
No 322
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=71.25 E-value=82 Score=33.83 Aligned_cols=137 Identities=11% Similarity=0.181 Sum_probs=76.1
Q ss_pred CCcEEEEeCCCCCCceeeeeccccCeEEEEE-eCCCCceEEEEcCCcEEEEEccCCCCee-EEeeeeecCCCCeEEEEEC
Q 016769 239 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSI-DESCNGGISGGADQKIVLYNLDHSTGSC-VIKKEINLERPGISGTSIR 316 (383)
Q Consensus 239 dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~~s~~~d~~i~~wdl~~~~~~~-~~~~~~~~~~~~i~~~~~~ 316 (383)
..++.|||+++.. .+..... .++|....| ++....++ .+..|.-|+++..+.+. .+..........|.....+
T Consensus 85 g~~lQiFnl~~k~-klks~~~-~e~VvfWkWis~~~l~lV---T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d 159 (1630)
T 1xi4_A 85 GKTLQIFNIEMKS-KMKAHTM-TDDVTFWKWISLNTVALV---TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTD 159 (1630)
T ss_pred CCeEEEeehHHhh-hhccccc-CCCceEEEecCCCeeEEE---cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeC
Confidence 6789999998632 2333332 467888888 55444444 36679999996432211 1111112223456677777
Q ss_pred CCCcEEEEEe-------CCCcEEEEEcCCCceEEEecccccceeEEEEe--C-CCCEEEEEeC---CCcEEEEeCCCC
Q 016769 317 PDSKIAATAG-------WDRRVRIYNYRKGSALAILKYHHATCNAVSFS--S-DCKLMASASE---DSTVALWELYPP 381 (383)
Q Consensus 317 p~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~s--p-d~~~las~s~---d~~i~~w~~~~~ 381 (383)
++.+.++..| -.|.+.+|..+.+.. ..+.||...-..+.+. + ....++.+.. .+.++|-++..|
T Consensus 160 ~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~ 236 (1630)
T 1xi4_A 160 AKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 236 (1630)
T ss_pred CCCCeEEEEeeccCCCcccceeeeeecccccc-hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCC
Confidence 8887665444 357888998876543 2455665543333221 1 1123333332 267788777543
No 323
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=70.69 E-value=3.6 Score=42.12 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=31.1
Q ss_pred ceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccc
Q 016769 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS 55 (383)
Q Consensus 20 ~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~ 55 (383)
.|.+++..++..+|+|-+.|+++|+|++.+++++..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 567778888989999999999999999998877654
No 324
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=69.90 E-value=58 Score=28.71 Aligned_cols=63 Identities=6% Similarity=0.032 Sum_probs=41.9
Q ss_pred CCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 316 RPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 316 ~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
++-...+..-+.-|.|++||++++.++..-+=-.+.|...+-+.+..=++.-.+.|.|..-.+
T Consensus 268 s~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 268 SEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCV 330 (365)
T ss_dssp ETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEE
T ss_pred cccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEE
Confidence 333345666788999999999999998765545666766555544444555556776654443
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=69.41 E-value=52 Score=27.95 Aligned_cols=91 Identities=15% Similarity=0.227 Sum_probs=45.7
Q ss_pred CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC-----CcEEEEEcCCCceEE--EecccccceeEE
Q 016769 283 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALA--ILKYHHATCNAV 355 (383)
Q Consensus 283 ~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d-----g~i~iwd~~~~~~~~--~~~~h~~~v~~v 355 (383)
+.+.+||+...+ ......+.........+.+ +++.++.|+.+ ..+.+||+.+.+=.. .+. ....-.++
T Consensus 184 ~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~ 258 (308)
T 1zgk_A 184 NSAECYYPERNE--WRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMK-HRRSALGI 258 (308)
T ss_dssp CCEEEEETTTTE--EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCS-SCCBSCEE
T ss_pred ceEEEEeCCCCe--EeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCC-CCccceEE
Confidence 447777775432 2211122222222233333 66777777765 568899997754221 111 11111222
Q ss_pred EEeCCCCEEEEEeCCC-----cEEEEeCC
Q 016769 356 SFSSDCKLMASASEDS-----TVALWELY 379 (383)
Q Consensus 356 ~~spd~~~las~s~d~-----~i~~w~~~ 379 (383)
+. -++++++.|+.++ .|.+||+.
T Consensus 259 ~~-~~~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 259 TV-HQGRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp EE-ETTEEEEECCBCSSCBCCEEEEEETT
T ss_pred EE-ECCEEEEEcCcCCCcccceEEEEcCC
Confidence 22 2678888887653 45666653
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=68.36 E-value=27 Score=30.48 Aligned_cols=40 Identities=18% Similarity=0.130 Sum_probs=20.2
Q ss_pred cEEEEEcCCCc--eEEEecccccceeEEEEeCCCCEEEEEeCCC
Q 016769 330 RVRIYNYRKGS--ALAILKYHHATCNAVSFSSDCKLMASASEDS 371 (383)
Q Consensus 330 ~i~iwd~~~~~--~~~~~~~h~~~v~~v~~spd~~~las~s~d~ 371 (383)
.+.+||+.+.+ .+..+......-. +..-++++++.|+.++
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGV--SLPWNNSLLIIGGETA 327 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSE--EEEETTEEEEEEEECG
T ss_pred eEEEEecCCCceeeCCCCCCCcccce--eEEeCCEEEEEeeeCC
Confidence 57788987653 3333322111112 2334778888888664
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=68.24 E-value=56 Score=27.84 Aligned_cols=83 Identities=13% Similarity=0.093 Sum_probs=40.4
Q ss_pred CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC-----cEEEEEcCCCceEEEec-ccccceeEEE
Q 016769 283 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR-----RVRIYNYRKGSALAILK-YHHATCNAVS 356 (383)
Q Consensus 283 ~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~-~h~~~v~~v~ 356 (383)
..+.+||+...+ ......+......-..+.+ +++.++.|+.++ .+.+||+.+.+=...-. .....-.+++
T Consensus 165 ~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 240 (315)
T 4asc_A 165 NKMCVYDPKKFE--WKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV 240 (315)
T ss_dssp CCEEEEETTTTE--EEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred ceEEEEeCCCCe--EEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE
Confidence 356777776432 2211122212222233333 667788888665 47888987764221111 1111112222
Q ss_pred EeCCCCEEEEEeCC
Q 016769 357 FSSDCKLMASASED 370 (383)
Q Consensus 357 ~spd~~~las~s~d 370 (383)
. -++++++.|+.+
T Consensus 241 ~-~~~~l~v~GG~~ 253 (315)
T 4asc_A 241 S-LVGTLYAIGGFA 253 (315)
T ss_dssp E-ETTEEEEEEEEE
T ss_pred E-ECCEEEEECCcc
Confidence 2 267888888864
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=64.32 E-value=67 Score=27.33 Aligned_cols=60 Identities=10% Similarity=-0.027 Sum_probs=32.2
Q ss_pred CCcEEEEEeCC--------CcEEEEEcCCCceEE--EecccccceeEEEEeCCCCEEEEEeC-C-----CcEEEEeCC
Q 016769 318 DSKIAATAGWD--------RRVRIYNYRKGSALA--ILKYHHATCNAVSFSSDCKLMASASE-D-----STVALWELY 379 (383)
Q Consensus 318 ~~~~l~s~~~d--------g~i~iwd~~~~~~~~--~~~~h~~~v~~v~~spd~~~las~s~-d-----~~i~~w~~~ 379 (383)
+++.++.|+.+ ..+.+||..+.+=.. .+. ....-.+++. -++++++.|+. + ..+.+||+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~ 173 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP-YVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPK 173 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS-SCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC-CcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCC
Confidence 56677777743 458889987754211 111 1111122222 36778888876 2 356777653
No 329
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=63.25 E-value=4.7 Score=42.25 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=30.3
Q ss_pred ceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccc
Q 016769 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS 55 (383)
Q Consensus 20 ~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~ 55 (383)
.|.+++..++..+|+|-+.|+++|+|++.+++++..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 455667778889999999999999999998877654
No 330
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=61.85 E-value=1.2e+02 Score=29.28 Aligned_cols=141 Identities=7% Similarity=0.041 Sum_probs=86.7
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
..+-..++.|..+++.... ....+.........+++|..+..++.+ ...++|.+.+++......+.. .......
T Consensus 52 ywtD~~~~~I~r~~~~g~~-~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~----~~l~~P~ 126 (628)
T 4a0p_A 52 YWTDISLKTISRAFMNGSA-LEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW----KDLDSPR 126 (628)
T ss_dssp EEEETTTTEEEEEETTSCS-CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC----SSCCCEE
T ss_pred EEEECCCCeEEEEECCCCC-cEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe----CCCCCcc
Confidence 4455667888888876422 222222223345688888766655544 446778898887543322221 2234578
Q ss_pred EEEECCCCcEEEEEeC--CCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 312 GTSIRPDSKIAATAGW--DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
++++.|...+|.-+.+ .++|...+++-....... ..-...+.|++.++++ +..+=...+.|...|+.
T Consensus 127 ~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 127 ALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 9999986555555553 568888888644433223 2445678999999765 55555666788888763
No 331
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=61.78 E-value=72 Score=26.84 Aligned_cols=60 Identities=18% Similarity=0.241 Sum_probs=33.1
Q ss_pred CCcEEEEEeCC-------CcEEEEEcCCCceEE--EecccccceeEEEEeCCCCEEEEEeCCC-----cEEEEeCC
Q 016769 318 DSKIAATAGWD-------RRVRIYNYRKGSALA--ILKYHHATCNAVSFSSDCKLMASASEDS-----TVALWELY 379 (383)
Q Consensus 318 ~~~~l~s~~~d-------g~i~iwd~~~~~~~~--~~~~h~~~v~~v~~spd~~~las~s~d~-----~i~~w~~~ 379 (383)
+++.++.|+.+ ..+.+||+.+.+=.. .+. ....-.+++. -++++++.|+.++ .+.+||+.
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~ 228 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMS-TRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPT 228 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCS-SCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETT
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCc-cccccccEEE-ECCEEEEECCCCCCcccceEEEEeCC
Confidence 56677777643 358889987654221 111 1111112222 2678888887654 57777763
No 332
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=60.83 E-value=22 Score=31.41 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=59.0
Q ss_pred EEEEEeCCCcEEEEeCCCCCCceeeeecc-ccCeEEEEEe--CCCCceEEE--EcCCcEEEEEccCCCCeeEEeeeeec-
Q 016769 232 NVLAGYEDGSILVWDIRNPGIPLTAMKVH-LEPVLCLSID--ESCNGGISG--GADQKIVLYNLDHSTGSCVIKKEINL- 305 (383)
Q Consensus 232 ~~~sg~~dg~i~~wdl~~~~~~~~~~~~h-~~~v~~~~~~--~~~~~~~s~--~~d~~i~~wdl~~~~~~~~~~~~~~~- 305 (383)
.++.++.||.|.-.|.+++.. .=.++.. ..++....-. +.....+.+ ..||.+..++.+. +...+......
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~-~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~--G~~~~~~~~~~l 88 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHI-IWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ--GLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEE-EEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT--EEEEEEEEHHHH
T ss_pred EEEEEeCCCeEEEEECCCCcE-EEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC--CcEEeeeccccc
Confidence 477889999999999776432 1111111 1222221100 011123333 4788888887653 32222211111
Q ss_pred -CCCCeEE---EEE-C----CCCcEEEEEeCCCcEEEEEcCCCceEEEec
Q 016769 306 -ERPGISG---TSI-R----PDSKIAATAGWDRRVRIYNYRKGSALAILK 346 (383)
Q Consensus 306 -~~~~i~~---~~~-~----p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 346 (383)
....+.. ..+ . ..+..+.+|+.++++...|+.+|+.+..+.
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 1111111 001 0 034577889999999999999999998775
No 333
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=60.69 E-value=76 Score=26.76 Aligned_cols=139 Identities=11% Similarity=0.090 Sum_probs=63.9
Q ss_pred EEEEeC--CCcEEEEeCCCCCC-ceeeeeccccCeEEEEEeCCCCceEEEEcC----CcEEEEEccCCCCeeEEeeeeec
Q 016769 233 VLAGYE--DGSILVWDIRNPGI-PLTAMKVHLEPVLCLSIDESCNGGISGGAD----QKIVLYNLDHSTGSCVIKKEINL 305 (383)
Q Consensus 233 ~~sg~~--dg~i~~wdl~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~s~~~d----~~i~~wdl~~~~~~~~~~~~~~~ 305 (383)
++.|+. ...+.+||..+..- .+..+.........+.+ .+..++.||.+ ..+.+||+...+ ......+..
T Consensus 15 ~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~--W~~~~~~p~ 90 (306)
T 3ii7_A 15 IALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDS--WYSKLGPPT 90 (306)
T ss_dssp EEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTE--EEEEECCSS
T ss_pred EEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCe--EEECCCCCc
Confidence 344543 45788899876321 01111111111112222 22334555544 456677765432 222222222
Q ss_pred CCCCeEEEEECCCCcEEEEEeCC------CcEEEEEcCCCceEE--EecccccceeEEEEeCCCCEEEEEeCC-------
Q 016769 306 ERPGISGTSIRPDSKIAATAGWD------RRVRIYNYRKGSALA--ILKYHHATCNAVSFSSDCKLMASASED------- 370 (383)
Q Consensus 306 ~~~~i~~~~~~p~~~~l~s~~~d------g~i~iwd~~~~~~~~--~~~~h~~~v~~v~~spd~~~las~s~d------- 370 (383)
.......+.+ +++.++.|+.+ ..+.+||..+.+=.. .+. ....-.+++. -++++++.|+.+
T Consensus 91 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 91 PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSML-TQRCSHGMVE-ANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCS-SCCBSCEEEE-ETTEEEEECCEESCTTTCE
T ss_pred cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCc-CCcceeEEEE-ECCEEEEECCCCCCCCccc
Confidence 2222233333 66777778765 468889987764221 111 1111112222 267777777643
Q ss_pred --CcEEEEeCC
Q 016769 371 --STVALWELY 379 (383)
Q Consensus 371 --~~i~~w~~~ 379 (383)
..+.+||+.
T Consensus 167 ~~~~~~~yd~~ 177 (306)
T 3ii7_A 167 VLNSCEVYDPA 177 (306)
T ss_dssp ECCCEEEEETT
T ss_pred ccceEEEeCCC
Confidence 346677653
No 334
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=59.63 E-value=19 Score=34.29 Aligned_cols=70 Identities=16% Similarity=0.128 Sum_probs=50.5
Q ss_pred CeEEEEECCCCcEEEEEe-CCCcEEEEEcCCC------ce-------EEEecccccceeEEEEeCCCCEEEEEeCCCcEE
Q 016769 309 GISGTSIRPDSKIAATAG-WDRRVRIYNYRKG------SA-------LAILKYHHATCNAVSFSSDCKLMASASEDSTVA 374 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~-~dg~i~iwd~~~~------~~-------~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~ 374 (383)
+.-++.++|||+|++.++ .+.++.++|.++. +. ..... -.......+|.++|....|---|..|-
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE
Confidence 456788999999876665 6889999999742 11 22222 122457789999997667777999999
Q ss_pred EEeCC
Q 016769 375 LWELY 379 (383)
Q Consensus 375 ~w~~~ 379 (383)
-||+.
T Consensus 403 kWni~ 407 (638)
T 3sbq_A 403 KWNME 407 (638)
T ss_dssp EEEHH
T ss_pred EEecc
Confidence 99974
No 335
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=59.49 E-value=13 Score=37.92 Aligned_cols=37 Identities=5% Similarity=0.160 Sum_probs=31.2
Q ss_pred CeEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe
Q 016769 309 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL 345 (383)
Q Consensus 309 ~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 345 (383)
.+.+++..++..++++-+.|+++|+|++.+++.+.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4666777788889999999999999999998877643
No 336
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=58.37 E-value=50 Score=31.46 Aligned_cols=60 Identities=13% Similarity=0.115 Sum_probs=39.0
Q ss_pred CCeEEEEECCCCcEEEEEeCC------------CcEEEEEcCCCceEEEeccc-ccceeEEEEeCCCCEEEEE
Q 016769 308 PGISGTSIRPDSKIAATAGWD------------RRVRIYNYRKGSALAILKYH-HATCNAVSFSSDCKLMASA 367 (383)
Q Consensus 308 ~~i~~~~~~p~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~h-~~~v~~v~~spd~~~las~ 367 (383)
.....+.|.++|.+.++.... ..+..++..+++....+.+. ...++.++|+||++.|..+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 346689999999877744321 14555565667654444332 3468999999999976554
No 337
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=56.44 E-value=53 Score=27.75 Aligned_cols=60 Identities=17% Similarity=0.156 Sum_probs=34.3
Q ss_pred CCcEEEEEeCC----CcEEEEEcCCCceEE--EecccccceeEEEEeCCCCEEEEEeCC------CcEEEEeCC
Q 016769 318 DSKIAATAGWD----RRVRIYNYRKGSALA--ILKYHHATCNAVSFSSDCKLMASASED------STVALWELY 379 (383)
Q Consensus 318 ~~~~l~s~~~d----g~i~iwd~~~~~~~~--~~~~h~~~v~~v~~spd~~~las~s~d------~~i~~w~~~ 379 (383)
+++.++.|+.+ ..+.+||..+.+-.. .+. ....-.+++. -++++++.|+.+ ..+.+||..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~ 126 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP-TPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTR 126 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS-SCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETT
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC-ccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCC
Confidence 56677777755 678889987764222 221 1111112222 267888888866 356777653
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=56.05 E-value=94 Score=26.39 Aligned_cols=60 Identities=18% Similarity=0.121 Sum_probs=31.8
Q ss_pred CCcEEEEEeCC-------CcEEEEEcCCCceEE--EecccccceeEEEEeCCCCEEEEEeCC------CcEEEEeCC
Q 016769 318 DSKIAATAGWD-------RRVRIYNYRKGSALA--ILKYHHATCNAVSFSSDCKLMASASED------STVALWELY 379 (383)
Q Consensus 318 ~~~~l~s~~~d-------g~i~iwd~~~~~~~~--~~~~h~~~v~~v~~spd~~~las~s~d------~~i~~w~~~ 379 (383)
+++.++.|+.+ ..+.+||..+.+=.. .+. ....-.+++. -++++++.|+.+ ..+.+||+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~ 183 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP-IKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPK 183 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS-SCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC-CcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCC
Confidence 56777778764 357788887654221 111 0111111222 467777777642 246777653
No 339
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=55.75 E-value=1.4e+02 Score=28.42 Aligned_cols=72 Identities=15% Similarity=0.078 Sum_probs=47.9
Q ss_pred EEEEEeCCCCceEEEE-cCCcEEEEEccCCC----------CeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEE
Q 016769 265 LCLSIDESCNGGISGG-ADQKIVLYNLDHST----------GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 333 (383)
Q Consensus 265 ~~~~~~~~~~~~~s~~-~d~~i~~wdl~~~~----------~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~i 333 (383)
-.+.++|++++++.++ .+.++.++|++... .... ..+.+. .-+....+|.++|....+---|..|.-
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~-~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVI-VGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGE-EECCBC-CSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccce-EeeccC-CCcccEEEECCCCceEeeeeecceEEE
Confidence 3577899999876665 47889999986310 0111 112221 235677899999965555558999999
Q ss_pred EEcCC
Q 016769 334 YNYRK 338 (383)
Q Consensus 334 wd~~~ 338 (383)
|++..
T Consensus 404 Wni~~ 408 (638)
T 3sbq_A 404 WNMEE 408 (638)
T ss_dssp EEHHH
T ss_pred EeccH
Confidence 99965
No 340
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=52.99 E-value=2.5e+02 Score=30.35 Aligned_cols=46 Identities=9% Similarity=0.128 Sum_probs=31.4
Q ss_pred EEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEecccccceeEEE
Q 016769 311 SGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVS 356 (383)
Q Consensus 311 ~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~ 356 (383)
-++.+++....+..-+.-|.|.++|+.++..+..-+=-...|...+
T Consensus 262 v~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~ 307 (1630)
T 1xi4_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTA 307 (1630)
T ss_pred eEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEec
Confidence 3455666666777788999999999999987754332334444433
No 341
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=51.68 E-value=55 Score=31.31 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=38.1
Q ss_pred eEEEEECCCCcEEEEEeCC----------C--cEEEEEcCCCceEEEeccc-ccceeEEEEeCCCCEEEEE
Q 016769 310 ISGTSIRPDSKIAATAGWD----------R--RVRIYNYRKGSALAILKYH-HATCNAVSFSSDCKLMASA 367 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~d----------g--~i~iwd~~~~~~~~~~~~h-~~~v~~v~~spd~~~las~ 367 (383)
.-.++|+|.|+++++-..+ + .+.+.+..+++....+.+. ...+..++|+||++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4568999999987765432 1 2334455566655444444 3468999999999977654
No 342
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=50.60 E-value=1.6e+02 Score=28.71 Aligned_cols=106 Identities=14% Similarity=0.163 Sum_probs=54.7
Q ss_pred CCCceEEEEcCC--cEEEEEccCCCCeeEEeee---eecCCCCeEEEEECCC-CcEEEEEeC--C-----CcEEEEEcCC
Q 016769 272 SCNGGISGGADQ--KIVLYNLDHSTGSCVIKKE---INLERPGISGTSIRPD-SKIAATAGW--D-----RRVRIYNYRK 338 (383)
Q Consensus 272 ~~~~~~s~~~d~--~i~~wdl~~~~~~~~~~~~---~~~~~~~i~~~~~~p~-~~~l~s~~~--d-----g~i~iwd~~~ 338 (383)
.+..++.||.++ .+.+||....+ ...... +......-..+.+..+ ++.++.|+. + ..+.+||+.+
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTE--EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred CCEEEEECCCCCCCCEEEEECCCCc--eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 344455666543 57788876433 221111 1112223334555555 677777776 2 4588999987
Q ss_pred Cc--------eEEEecccccceeEEEEeCCCCEEEEEeCC--------CcEEEEeCC
Q 016769 339 GS--------ALAILKYHHATCNAVSFSSDCKLMASASED--------STVALWELY 379 (383)
Q Consensus 339 ~~--------~~~~~~~h~~~v~~v~~spd~~~las~s~d--------~~i~~w~~~ 379 (383)
.. .+.........-.++....++++++.|+.+ ..|.+||+.
T Consensus 578 ~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 578 ENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp TCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred CccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 76 111111111111223333447888888753 457777764
No 343
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=49.04 E-value=14 Score=36.23 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=26.7
Q ss_pred ceeeEEEeCCCCeEEEecCCCeEEEeeCcccccccc
Q 016769 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS 55 (383)
Q Consensus 20 ~V~~v~f~~~~~~L~sgs~D~~v~vW~~~~~~~~~~ 55 (383)
.|.++.+ +..+|+|-+.|+++|+|++.+++++..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 4555444 567999999999999999998876543
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=47.31 E-value=1.3e+02 Score=25.46 Aligned_cols=82 Identities=11% Similarity=0.080 Sum_probs=38.9
Q ss_pred CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC-----CcEEEEEcCCCceEE--EecccccceeEE
Q 016769 283 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALA--ILKYHHATCNAV 355 (383)
Q Consensus 283 ~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d-----g~i~iwd~~~~~~~~--~~~~h~~~v~~v 355 (383)
..+.+||+...+ ......+.........+.+ +++.++.|+.+ ..+.+||+.+.+=.. .+.. ...-.++
T Consensus 175 ~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~ 249 (318)
T 2woz_A 175 NRVFIYNPKKGD--WKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQ-ERSSISL 249 (318)
T ss_dssp CCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSS-CCBSCEE
T ss_pred ceEEEEcCCCCE--EEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCC-cccceEE
Confidence 347778776432 2221122222222223333 56777777754 356788887654221 1111 1111122
Q ss_pred EEeCCCCEEEEEeCC
Q 016769 356 SFSSDCKLMASASED 370 (383)
Q Consensus 356 ~~spd~~~las~s~d 370 (383)
.. -++++++.|+.+
T Consensus 250 ~~-~~~~i~v~GG~~ 263 (318)
T 2woz_A 250 VS-LAGSLYAIGGFA 263 (318)
T ss_dssp EE-ETTEEEEECCBC
T ss_pred EE-ECCEEEEECCee
Confidence 22 367888888765
No 345
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=47.27 E-value=15 Score=38.48 Aligned_cols=36 Identities=6% Similarity=0.174 Sum_probs=29.3
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL 345 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 345 (383)
+.+++..++..++++-+.|+++|||++.+++.+.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 444555678889999999999999999999877653
No 346
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=46.88 E-value=1.3e+02 Score=25.34 Aligned_cols=91 Identities=12% Similarity=0.187 Sum_probs=45.2
Q ss_pred CcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC-----CcEEEEEcCCCceEE--EecccccceeEE
Q 016769 283 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALA--ILKYHHATCNAV 355 (383)
Q Consensus 283 ~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d-----g~i~iwd~~~~~~~~--~~~~h~~~v~~v 355 (383)
..+.+||+...+ ......+......-..+.+ +++.++.|+.+ ..+.+||+.+.+=.. .+. ....-.++
T Consensus 137 ~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~ 211 (308)
T 1zgk_A 137 NSVERYEPERDE--WHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMN-TIRSGAGV 211 (308)
T ss_dssp CCEEEEETTTTE--EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCS-SCCBSCEE
T ss_pred ccEEEECCCCCe--EeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCC-CccccceE
Confidence 346677765432 2211122222222233333 56777777754 458889987654221 111 11111122
Q ss_pred EEeCCCCEEEEEeCC-----CcEEEEeCC
Q 016769 356 SFSSDCKLMASASED-----STVALWELY 379 (383)
Q Consensus 356 ~~spd~~~las~s~d-----~~i~~w~~~ 379 (383)
+.. ++++++.|+.+ ..+.+||+.
T Consensus 212 ~~~-~~~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 212 CVL-HNCIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp EEE-TTEEEEECCBCSSSBCCCEEEEETT
T ss_pred EEE-CCEEEEEeCCCCCCccceEEEEeCC
Confidence 222 67788888765 457777763
No 347
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=45.74 E-value=35 Score=33.45 Aligned_cols=34 Identities=9% Similarity=0.081 Sum_probs=27.0
Q ss_pred eEEEEECCCCcEEEEEeCCCcEEEEEcCCCceEEEe
Q 016769 310 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL 345 (383)
Q Consensus 310 i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 345 (383)
|.++.+ +..++++-+.|+++|+||+.+++.+.+.
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 444444 4679999999999999999999877654
No 348
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=44.67 E-value=1.2e+02 Score=26.11 Aligned_cols=52 Identities=13% Similarity=0.091 Sum_probs=28.3
Q ss_pred CCcEEEEEeC-C---------CcEEEEEcCCCceEE--EecccccceeEEEEeCCCCEEEEEeCC
Q 016769 318 DSKIAATAGW-D---------RRVRIYNYRKGSALA--ILKYHHATCNAVSFSSDCKLMASASED 370 (383)
Q Consensus 318 ~~~~l~s~~~-d---------g~i~iwd~~~~~~~~--~~~~h~~~v~~v~~spd~~~las~s~d 370 (383)
+++.++.|+. + ..+.+||..+.+=.. .+......-.++. ..++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTF-VHNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEE-EETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEE-EECCEEEEEeCcC
Confidence 5667777765 2 468889987754221 1110111111222 2577888888876
No 349
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=42.50 E-value=2.3e+02 Score=27.04 Aligned_cols=142 Identities=8% Similarity=0.041 Sum_probs=83.4
Q ss_pred EEEEeCCCcEEEEeCCCCCCceeeeeccccCeEEEEEeCCCCceEEE-EcCCcEEEEEccCCCCeeEEeeeeecCCCCeE
Q 016769 233 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEINLERPGIS 311 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~-~~d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~ 311 (383)
.++-...+.|..+++.... ....+.........+++|..+..++.+ ...+.|.+.+++......+. ...-....
T Consensus 364 y~sD~~~~~I~r~~~~g~~-~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~----~~~l~~P~ 438 (619)
T 3s94_A 364 YWTDDEVRAIRRSFIDGSG-SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILI----SEDLEEPR 438 (619)
T ss_dssp EEEETTTTEEEEEETTSCS-CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE----CTTCCSEE
T ss_pred EEEeCCCCeEEEEEcCCCc-cEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEE----ECCCCCee
Confidence 3444556778888775422 122222233456688998755555444 45678999988754322221 12235688
Q ss_pred EEEECCCCcEEEEEeC--CCcEEEEEcCCCceEEEecccccceeEEEEeCCCC-EEEEEeCCCcEEEEeCC
Q 016769 312 GTSIRPDSKIAATAGW--DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 379 (383)
Q Consensus 312 ~~~~~p~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~-~las~s~d~~i~~w~~~ 379 (383)
++++.|...+|.-+.+ ..+|...+++-..........-...+.|++.++++ +..+=+..+.|...++.
T Consensus 439 ~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~d 509 (619)
T 3s94_A 439 AIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTD 509 (619)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESS
T ss_pred eEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecC
Confidence 9999997444444443 36777777753333222333445678999998655 44555555677777763
No 350
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=39.61 E-value=2e+02 Score=25.38 Aligned_cols=30 Identities=23% Similarity=0.225 Sum_probs=24.2
Q ss_pred EEEEEeCCCCceEEEEcCCcEEEEEccCCC
Q 016769 265 LCLSIDESCNGGISGGADQKIVLYNLDHST 294 (383)
Q Consensus 265 ~~~~~~~~~~~~~s~~~d~~i~~wdl~~~~ 294 (383)
.+|.++..+..++.-..-|.+.+||+++.+
T Consensus 263 Vamqvs~kygviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 263 VAMQISEKHDVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred EEEEecccCCEEEEEeCCcEEEEEEcccCc
Confidence 467778887777788899999999998554
No 351
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=35.17 E-value=68 Score=28.17 Aligned_cols=28 Identities=14% Similarity=0.167 Sum_probs=24.2
Q ss_pred EEEEEeCCCcEEEEEcCCCceEEEeccc
Q 016769 321 IAATAGWDRRVRIYNYRKGSALAILKYH 348 (383)
Q Consensus 321 ~l~s~~~dg~i~iwd~~~~~~~~~~~~h 348 (383)
.++.++.||.|.-+|..+|+....++.-
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~ 39 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPE 39 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGG
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 6788999999999999999999887643
No 352
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=29.86 E-value=3.9e+02 Score=25.86 Aligned_cols=63 Identities=10% Similarity=0.136 Sum_probs=36.9
Q ss_pred CCCcEEEEEeCCC--cEEEEEcCCCceEEE-----ecccccceeEEEEeCC-CCEEEEEeCC-------CcEEEEeCC
Q 016769 317 PDSKIAATAGWDR--RVRIYNYRKGSALAI-----LKYHHATCNAVSFSSD-CKLMASASED-------STVALWELY 379 (383)
Q Consensus 317 p~~~~l~s~~~dg--~i~iwd~~~~~~~~~-----~~~h~~~v~~v~~spd-~~~las~s~d-------~~i~~w~~~ 379 (383)
.+++.++.|+.++ .+.+||..+.+=... .......-.++.+..+ +++++.|+.+ ..+.+||+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 576 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD 576 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc
Confidence 3778888888665 688999977542211 1001111223455655 7788888762 346777764
No 353
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=29.83 E-value=2.6e+02 Score=23.77 Aligned_cols=86 Identities=9% Similarity=0.028 Sum_probs=42.6
Q ss_pred EeCCCCceEEEEc-CCcEEEEEccCCCCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCCC--cEEEEEcCCCceEEEe
Q 016769 269 IDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR--RVRIYNYRKGSALAIL 345 (383)
Q Consensus 269 ~~~~~~~~~s~~~-d~~i~~wdl~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg--~i~iwd~~~~~~~~~~ 345 (383)
+++.+..++-.+. ...|.+-+++...... + .. +... ..+.|++++|+=..+++ .|..-+++.... ..+
T Consensus 152 ~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~-l---~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~L 222 (302)
T 3s25_A 152 CNTSDRYFYYNNPKNGQLYRYDTASQSEAL-F---YD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVL 222 (302)
T ss_dssp SEEETTEEEEECTTTCCEEEEETTTTEEEE-E---EC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EEC
T ss_pred eeEECCEEEEEeCCCceEEEEECCCCCEEE-E---eC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEE
Confidence 3444555543333 4566666665432211 1 11 1122 23568888877666553 455556654432 233
Q ss_pred cccccceeEEEEeCCCCEEEEE
Q 016769 346 KYHHATCNAVSFSSDCKLMASA 367 (383)
Q Consensus 346 ~~h~~~v~~v~~spd~~~las~ 367 (383)
.. ..+ -.|+|++++|..+
T Consensus 223 t~--~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 223 TE--ANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp SC--SCE--EEEEEETTEEEEE
T ss_pred eC--CCc--ceEEECCCEEEEE
Confidence 21 122 2367777776654
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=27.08 E-value=3.6e+02 Score=24.60 Aligned_cols=96 Identities=11% Similarity=0.094 Sum_probs=49.3
Q ss_pred EEEEeCCCcEEEEeCCCC--CCceeeee---------ccccCeEEEEEeCCC---Cce-EEEEc--C----------CcE
Q 016769 233 VLAGYEDGSILVWDIRNP--GIPLTAMK---------VHLEPVLCLSIDESC---NGG-ISGGA--D----------QKI 285 (383)
Q Consensus 233 ~~sg~~dg~i~~wdl~~~--~~~~~~~~---------~h~~~v~~~~~~~~~---~~~-~s~~~--d----------~~i 285 (383)
+++....|.|++++.... ..++..+. ....-...|+++|+. ..+ ++-+. + .+|
T Consensus 29 l~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v 108 (463)
T 2wg3_C 29 LFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRV 108 (463)
T ss_dssp EEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEE
T ss_pred EEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEE
Confidence 555667899999974321 11222111 012356788998861 122 22221 1 245
Q ss_pred EEEEccCC--------CCeeEEeeeeecCCCCeEEEEECCCCcEEEEEeCC
Q 016769 286 VLYNLDHS--------TGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD 328 (383)
Q Consensus 286 ~~wdl~~~--------~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~d 328 (383)
..|.+... +...++.............++|.|||.+.++.+..
T Consensus 109 ~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 109 VEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp EEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred EEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 55766431 11222222212223456789999999877776653
No 355
>3plv_C 66 kDa U4/U6.U5 small nuclear ribonucleoprotein C; ubiquitin-like, peptide binding protein; 1.90A {Saccharomyces cerevisiae}
Probab=23.18 E-value=37 Score=16.21 Aligned_cols=8 Identities=25% Similarity=0.588 Sum_probs=5.9
Q ss_pred CCCCCCCC.....
Q 016769 1 MSKRPPPP..... 8 (383)
Q Consensus 1 ~~~~~~~~..... 8 (383)
||++|.||
T Consensus 14 lGLkplp~..... 21 (21)
T 3plv_C 14 LGLKLIPPxxxxx 26 (26)
T ss_dssp TTCCCCCC.....
T ss_pred cCCCCCCC.....
Confidence 68888765
No 356
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=23.14 E-value=3.6e+02 Score=23.24 Aligned_cols=104 Identities=3% Similarity=-0.044 Sum_probs=64.3
Q ss_pred CCceEEEEcCCcEEEEEccCCCCee---EEeeeeecCCCCeEEEEECCCCcEEEEEeCCCcEEEEEcC--CCce------
Q 016769 273 CNGGISGGADQKIVLYNLDHSTGSC---VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR--KGSA------ 341 (383)
Q Consensus 273 ~~~~~s~~~d~~i~~wdl~~~~~~~---~~~~~~~~~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~--~~~~------ 341 (383)
...++..+.+|.++.-.+....... .....++ ....+-.+........++..+..|++..|... .-..
T Consensus 109 e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lk-e~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~ 187 (327)
T 3uc1_A 109 APYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLR-DNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATS 187 (327)
T ss_dssp SSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCC-TTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSB
T ss_pred CCEEEEEcCCCEEEEeEHHHhhccccCceEEEEEC-CCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCC
Confidence 3567888899999988876532211 1111111 22345444444455678888999999999887 3211
Q ss_pred ---EEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeC
Q 016769 342 ---LAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 378 (383)
Q Consensus 342 ---~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~ 378 (383)
.-.+. ..+.|.++...+++..|+..+..|.++.-.+
T Consensus 188 Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 188 GVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp CEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred CeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEH
Confidence 11122 2345666666666678999999999988765
No 357
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=20.56 E-value=3.8e+02 Score=22.41 Aligned_cols=104 Identities=11% Similarity=-0.020 Sum_probs=65.4
Q ss_pred CCceEEEEcCCcEEEEEccCCC--CeeEEeeeeec-CCCCeEEEEECCCCcEEEEEeCCCcEEEEEcCCC---------c
Q 016769 273 CNGGISGGADQKIVLYNLDHST--GSCVIKKEINL-ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG---------S 340 (383)
Q Consensus 273 ~~~~~s~~~d~~i~~wdl~~~~--~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~s~~~dg~i~iwd~~~~---------~ 340 (383)
...++..+.+|.++...++... .... ..++. ....+-.+....+...++..+.+|.+..+....- .
T Consensus 80 ~~~~v~~T~~G~iKr~~l~~~~~~~~G~--~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv 157 (276)
T 3no0_A 80 GNRLLLATKKGYVKKIPLAEFEYKAQGM--PIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGV 157 (276)
T ss_dssp CSEEEEEETTSEEEEEEGGGTTTCSTTE--ECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CCEEEEEeCCCEEEEEEHHHhhhhcCCe--EEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCE
Confidence 3467788899999998876542 0011 11111 2345555555556667888999999999987431 1
Q ss_pred eEEEecccccceeEEEEeCCCCEEEEEeCCCcEEEEeCC
Q 016769 341 ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 379 (383)
Q Consensus 341 ~~~~~~~h~~~v~~v~~spd~~~las~s~d~~i~~w~~~ 379 (383)
..-.+.. .+.|.++...+++..++..+..|.++..++.
T Consensus 158 ~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 158 QGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp ECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred EEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 1112222 2456665555666789999999999988763
No 358
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=20.32 E-value=3.9e+02 Score=22.57 Aligned_cols=60 Identities=3% Similarity=-0.091 Sum_probs=30.9
Q ss_pred EECCCCcEEEEEe----CCCcEEEEEcCCCceEEEecccccceeEEEEeCCCCEEEEEeC-CCcEEEEeC
Q 016769 314 SIRPDSKIAATAG----WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE-DSTVALWEL 378 (383)
Q Consensus 314 ~~~p~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~spd~~~las~s~-d~~i~~w~~ 378 (383)
.|+++++.|+=.. .+..|+.-+++... ...+..+.. .+|+|+++.|.-.+. ...|..-++
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l 174 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDT 174 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEET
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEEC
Confidence 5667777666544 34455555665333 233332322 345677776665554 344544443
Done!