Query 016771
Match_columns 383
No_of_seqs 329 out of 2466
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 02:39:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016771.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016771hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01691 enolase-ppase 2,3-di 100.0 1.5E-36 3.3E-41 279.4 22.9 218 141-383 1-220 (220)
2 COG4229 Predicted enolase-phos 100.0 1.5E-32 3.2E-37 236.8 18.2 222 140-381 3-224 (229)
3 KOG2631 Class II aldolase/addu 100.0 1.2E-29 2.6E-34 222.2 10.8 107 1-111 122-234 (238)
4 KOG2630 Enolase-phosphatase E- 100.0 1.8E-27 3.9E-32 212.7 18.5 242 138-383 5-248 (254)
5 PLN02770 haloacid dehalogenase 100.0 4E-27 8.7E-32 221.4 20.2 123 257-382 106-230 (248)
6 COG0546 Gph Predicted phosphat 100.0 8E-27 1.7E-31 215.6 20.5 125 257-383 87-213 (220)
7 PRK13288 pyrophosphatase PpaX; 99.9 9.8E-27 2.1E-31 213.6 17.5 125 257-383 80-206 (214)
8 PRK13226 phosphoglycolate phos 99.9 4.5E-26 9.8E-31 211.7 20.6 125 257-383 93-220 (229)
9 TIGR02253 CTE7 HAD superfamily 99.9 7E-26 1.5E-30 208.4 21.7 124 257-383 92-220 (221)
10 PRK11587 putative phosphatase; 99.9 2.4E-26 5.2E-31 211.8 18.5 123 257-383 81-203 (218)
11 TIGR01422 phosphonatase phosph 99.9 1.9E-26 4.2E-31 217.1 17.7 124 257-383 97-248 (253)
12 PLN03243 haloacid dehalogenase 99.9 6.4E-26 1.4E-30 214.5 18.9 123 257-383 107-230 (260)
13 PRK10826 2-deoxyglucose-6-phos 99.9 1.1E-25 2.3E-30 207.9 20.0 124 257-383 90-215 (222)
14 TIGR01449 PGP_bact 2-phosphogl 99.9 1.2E-25 2.6E-30 205.5 19.1 125 257-383 83-209 (213)
15 PRK13478 phosphonoacetaldehyde 99.9 8.1E-26 1.8E-30 214.7 17.7 107 257-365 99-207 (267)
16 TIGR03351 PhnX-like phosphonat 99.9 3.8E-25 8.2E-30 203.6 18.9 126 257-383 85-215 (220)
17 PLN02575 haloacid dehalogenase 99.9 3.6E-25 7.8E-30 217.6 19.1 124 257-383 214-337 (381)
18 TIGR01428 HAD_type_II 2-haloal 99.9 1.4E-24 3E-29 196.8 21.1 106 258-366 91-197 (198)
19 PRK13223 phosphoglycolate phos 99.9 9E-25 1.9E-29 208.2 19.7 135 247-383 89-225 (272)
20 TIGR01454 AHBA_synth_RP 3-amin 99.9 5.3E-25 1.2E-29 200.7 17.1 124 257-383 73-199 (205)
21 PRK09449 dUMP phosphatase; Pro 99.9 3.4E-24 7.3E-29 197.9 22.3 123 258-383 94-218 (224)
22 PRK13222 phosphoglycolate phos 99.9 2.3E-24 4.9E-29 198.7 20.9 125 257-383 91-217 (226)
23 TIGR02254 YjjG/YfnB HAD superf 99.9 1.2E-23 2.5E-28 193.6 22.0 124 257-383 95-220 (224)
24 PRK14988 GMP/IMP nucleotidase; 99.9 2.5E-24 5.4E-29 199.4 17.1 105 257-364 91-197 (224)
25 COG0637 Predicted phosphatase/ 99.9 1.9E-24 4.1E-29 199.9 15.7 108 255-365 82-190 (221)
26 PLN02940 riboflavin kinase 99.9 8.1E-24 1.7E-28 210.6 20.5 124 257-383 91-216 (382)
27 PRK10563 6-phosphogluconate ph 99.9 3.8E-24 8.2E-29 197.2 15.2 120 257-382 86-207 (221)
28 PRK13225 phosphoglycolate phos 99.9 9.3E-24 2E-28 201.1 18.2 123 256-383 139-263 (273)
29 PRK10748 flavin mononucleotide 99.9 2E-23 4.3E-28 195.1 19.1 119 257-383 111-234 (238)
30 PLN02779 haloacid dehalogenase 99.9 1.7E-23 3.6E-28 200.8 18.5 123 258-383 143-268 (286)
31 PRK06698 bifunctional 5'-methy 99.9 1.7E-23 3.6E-28 213.5 18.2 122 257-383 328-449 (459)
32 TIGR02252 DREG-2 REG-2-like, H 99.9 1.7E-22 3.8E-27 183.6 20.4 99 257-359 103-203 (203)
33 TIGR01990 bPGM beta-phosphoglu 99.9 4.8E-23 1E-27 184.1 14.8 99 258-361 86-185 (185)
34 COG1011 Predicted hydrolase (H 99.9 3.3E-22 7E-27 184.6 19.0 123 257-383 97-222 (229)
35 PRK10725 fructose-1-P/6-phosph 99.9 3.1E-22 6.7E-27 179.6 17.8 99 258-361 87-186 (188)
36 PF13419 HAD_2: Haloacid dehal 99.9 5.7E-22 1.2E-26 173.7 18.8 102 256-360 74-176 (176)
37 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 1.6E-22 3.5E-27 180.7 15.0 100 257-360 86-185 (185)
38 PLN02919 haloacid dehalogenase 99.9 9E-22 2E-26 217.3 20.2 122 259-383 161-285 (1057)
39 TIGR01993 Pyr-5-nucltdase pyri 99.9 4.9E-22 1.1E-26 178.1 14.8 98 257-360 82-184 (184)
40 TIGR02247 HAD-1A3-hyp Epoxide 99.9 9.2E-22 2E-26 180.0 12.3 104 257-363 92-198 (211)
41 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 5.6E-21 1.2E-25 169.9 16.9 99 258-360 84-183 (183)
42 PRK09456 ?-D-glucose-1-phospha 99.9 4.9E-21 1.1E-25 174.0 16.1 103 259-364 84-188 (199)
43 PHA02597 30.2 hypothetical pro 99.9 4E-21 8.7E-26 174.1 13.9 119 258-383 73-194 (197)
44 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 2.2E-20 4.7E-25 169.4 18.2 92 259-353 106-197 (197)
45 PLN02811 hydrolase 99.8 2.4E-20 5.2E-25 172.1 14.6 124 257-383 76-206 (220)
46 PRK08942 D,D-heptose 1,7-bisph 99.8 4E-20 8.6E-25 165.6 13.4 123 259-383 29-172 (181)
47 TIGR01656 Histidinol-ppas hist 99.8 3.1E-20 6.7E-25 160.9 11.0 104 259-363 27-147 (147)
48 TIGR00338 serB phosphoserine p 99.8 7.8E-19 1.7E-23 161.5 16.9 117 258-379 84-209 (219)
49 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 9.9E-19 2.1E-23 151.9 16.6 93 257-354 62-154 (154)
50 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 2.5E-19 5.3E-24 159.0 11.8 87 257-353 88-175 (175)
51 PLN02954 phosphoserine phospha 99.8 3.4E-18 7.4E-23 157.8 17.5 123 258-383 83-219 (224)
52 TIGR01662 HAD-SF-IIIA HAD-supe 99.8 8.6E-19 1.9E-23 148.7 11.6 98 259-362 25-132 (132)
53 TIGR00213 GmhB_yaeD D,D-heptos 99.8 1.2E-18 2.6E-23 155.4 12.7 124 258-383 25-174 (176)
54 KOG3085 Predicted hydrolase (H 99.8 9.2E-18 2E-22 154.5 16.6 105 257-365 111-217 (237)
55 KOG2914 Predicted haloacid-hal 99.8 1E-17 2.2E-22 153.6 16.5 126 256-382 89-217 (222)
56 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 8E-18 1.7E-22 152.1 15.4 101 258-362 79-191 (201)
57 TIGR01685 MDP-1 magnesium-depe 99.8 5.4E-19 1.2E-23 156.9 7.3 106 257-365 43-161 (174)
58 PRK06769 hypothetical protein; 99.8 2.9E-18 6.3E-23 152.6 10.8 121 259-383 28-167 (173)
59 PRK06755 hypothetical protein; 99.8 2.3E-18 5E-23 157.1 8.9 91 7-100 114-204 (209)
60 TIGR01672 AphA HAD superfamily 99.7 4.7E-17 1E-21 151.4 16.1 97 258-363 113-213 (237)
61 TIGR01664 DNA-3'-Pase DNA 3'-p 99.7 1.5E-17 3.3E-22 147.0 11.3 96 260-359 43-160 (166)
62 PRK09552 mtnX 2-hydroxy-3-keto 99.7 2.2E-16 4.8E-21 145.6 16.3 99 257-358 72-184 (219)
63 KOG3109 Haloacid dehalogenase- 99.7 2E-16 4.4E-21 141.3 14.5 189 139-364 13-208 (244)
64 PRK11133 serB phosphoserine ph 99.7 2.2E-16 4.9E-21 153.4 13.9 117 258-379 180-305 (322)
65 TIGR01261 hisB_Nterm histidino 99.7 2.7E-16 5.8E-21 138.3 10.9 104 258-363 28-149 (161)
66 TIGR01452 PGP_euk phosphoglyco 99.7 1.7E-16 3.7E-21 151.8 10.2 122 260-383 144-279 (279)
67 PRK06754 mtnB methylthioribulo 99.7 4.1E-16 8.9E-21 142.8 11.0 93 7-101 114-206 (208)
68 PRK13582 thrH phosphoserine ph 99.7 1.3E-15 2.8E-20 138.6 13.3 121 258-383 67-191 (205)
69 TIGR03328 salvage_mtnB methylt 99.6 7.5E-16 1.6E-20 139.5 10.7 90 8-97 103-193 (193)
70 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.6 3.2E-16 6.9E-21 148.2 7.9 123 260-383 121-250 (257)
71 TIGR01489 DKMTPPase-SF 2,3-dik 99.6 6.4E-15 1.4E-19 131.6 14.1 95 258-356 71-184 (188)
72 cd01427 HAD_like Haloacid deha 99.6 5.7E-15 1.2E-19 123.4 11.7 99 259-360 24-139 (139)
73 PF00702 Hydrolase: haloacid d 99.6 2.5E-14 5.4E-19 130.1 16.5 89 257-354 125-215 (215)
74 PRK11009 aphA acid phosphatase 99.6 1.1E-14 2.5E-19 135.3 13.9 98 257-365 112-215 (237)
75 TIGR01668 YqeG_hyp_ppase HAD s 99.6 6.1E-15 1.3E-19 130.9 10.9 97 259-366 43-141 (170)
76 TIGR03333 salvage_mtnX 2-hydro 99.6 4E-14 8.7E-19 130.1 14.3 95 258-355 69-177 (214)
77 PRK09220 methylthioribulose-1- 99.6 1.2E-14 2.6E-19 132.8 10.3 92 7-98 110-202 (204)
78 COG2179 Predicted hydrolase of 99.6 2.2E-14 4.7E-19 123.5 10.4 90 262-362 49-139 (175)
79 TIGR01670 YrbI-phosphatas 3-de 99.5 7.8E-15 1.7E-19 128.1 7.0 100 267-380 36-135 (154)
80 TIGR02726 phenyl_P_delta pheny 99.5 2.9E-14 6.2E-19 126.3 8.1 83 267-360 42-124 (169)
81 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.5 7.4E-13 1.6E-17 120.0 16.8 101 258-359 86-196 (202)
82 TIGR01488 HAD-SF-IB Haloacid D 99.5 6.7E-13 1.5E-17 117.5 14.7 95 258-353 72-177 (177)
83 PRK10444 UMP phosphatase; Prov 99.5 7.2E-13 1.6E-17 124.6 15.1 69 314-383 172-245 (248)
84 PRK05446 imidazole glycerol-ph 99.5 3.3E-13 7.1E-18 132.3 13.0 105 257-363 28-150 (354)
85 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.5 1.6E-13 3.5E-18 129.2 10.1 122 259-383 121-249 (249)
86 PHA02530 pseT polynucleotide k 99.5 2.6E-13 5.7E-18 130.8 10.3 106 257-363 185-298 (300)
87 PLN02645 phosphoglycolate phos 99.4 1.8E-13 3.9E-18 133.0 8.4 114 267-383 178-303 (311)
88 TIGR02137 HSK-PSP phosphoserin 99.4 3.4E-12 7.4E-17 116.5 14.2 101 258-363 67-173 (203)
89 PF13242 Hydrolase_like: HAD-h 99.4 7.2E-13 1.6E-17 101.5 5.7 69 314-383 2-75 (75)
90 smart00577 CPDc catalytic doma 99.4 9.5E-13 2.1E-17 114.2 6.2 94 257-357 43-138 (148)
91 TIGR01663 PNK-3'Pase polynucle 99.3 5E-12 1.1E-16 129.8 11.1 92 260-355 198-305 (526)
92 TIGR01681 HAD-SF-IIIC HAD-supe 99.3 5.7E-12 1.2E-16 106.6 7.4 91 259-352 29-126 (128)
93 PTZ00445 p36-lilke protein; Pr 99.3 8.1E-12 1.8E-16 112.4 8.7 103 260-363 76-207 (219)
94 COG0560 SerB Phosphoserine pho 99.3 4.4E-11 9.5E-16 109.9 13.3 101 258-359 76-185 (212)
95 COG0241 HisB Histidinol phosph 99.3 3.6E-11 7.7E-16 106.7 11.7 106 259-366 31-155 (181)
96 PRK08193 araD L-ribulose-5-pho 99.2 1.8E-11 4E-16 113.8 8.5 75 30-104 124-210 (231)
97 PRK08087 L-fuculose phosphate 99.2 1.9E-11 4.2E-16 112.5 8.4 67 31-100 123-190 (215)
98 COG0647 NagD Predicted sugar p 99.2 1.1E-10 2.3E-15 110.3 13.2 111 260-383 134-261 (269)
99 PRK03634 rhamnulose-1-phosphat 99.2 2.5E-11 5.4E-16 115.6 8.7 72 31-105 180-253 (274)
100 TIGR02244 HAD-IG-Ncltidse HAD 99.2 2.7E-10 5.9E-15 111.1 15.7 107 256-363 181-325 (343)
101 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.2 1.4E-11 3E-16 115.5 4.7 99 261-361 140-241 (242)
102 PRK06557 L-ribulose-5-phosphat 99.2 6.9E-11 1.5E-15 109.4 8.8 75 30-105 130-205 (221)
103 PRK06833 L-fuculose phosphate 99.2 7.4E-11 1.6E-15 108.6 8.9 72 31-105 125-197 (214)
104 PRK05874 L-fuculose-phosphate 99.2 7E-11 1.5E-15 108.9 8.7 72 31-105 128-200 (217)
105 PRK08660 L-fuculose phosphate 99.2 6.9E-11 1.5E-15 106.0 8.4 66 30-98 115-180 (181)
106 PF12689 Acid_PPase: Acid Phos 99.2 9.7E-11 2.1E-15 103.3 8.3 103 257-363 43-153 (169)
107 PRK07490 hypothetical protein; 99.2 1E-10 2.2E-15 109.8 8.6 67 31-100 134-202 (245)
108 TIGR01086 fucA L-fuculose phos 99.1 1E-10 2.2E-15 107.6 8.3 72 31-105 122-195 (214)
109 cd00398 Aldolase_II Class II A 99.1 8E-11 1.7E-15 108.0 7.6 69 30-101 122-193 (209)
110 PRK08238 hypothetical protein; 99.1 1.4E-09 3E-14 111.3 17.3 95 259-363 72-167 (479)
111 TIGR02624 rhamnu_1P_ald rhamnu 99.1 1.1E-10 2.4E-15 110.7 8.2 71 31-104 178-250 (270)
112 PRK06486 hypothetical protein; 99.1 1.1E-10 2.5E-15 110.4 8.2 84 9-100 135-218 (262)
113 PRK06357 hypothetical protein; 99.1 2.1E-10 4.5E-15 105.7 8.5 68 30-99 133-203 (216)
114 TIGR01686 FkbH FkbH-like domai 99.1 2.4E-10 5.2E-15 111.5 8.8 91 259-356 31-125 (320)
115 TIGR01460 HAD-SF-IIA Haloacid 99.1 4.1E-10 9E-15 105.2 9.8 49 314-363 186-236 (236)
116 PRK08130 putative aldolase; Va 99.1 2.6E-10 5.6E-15 104.9 8.2 66 30-98 127-193 (213)
117 PRK09484 3-deoxy-D-manno-octul 99.1 3.4E-10 7.3E-15 101.7 8.7 82 266-358 55-136 (183)
118 PRK08333 L-fuculose phosphate 99.1 3.1E-10 6.7E-15 102.1 8.0 63 30-95 120-183 (184)
119 PF08645 PNK3P: Polynucleotide 99.1 4.9E-10 1.1E-14 98.4 9.0 95 260-358 30-153 (159)
120 PRK11590 hypothetical protein; 99.1 2.1E-08 4.5E-13 92.0 19.5 99 258-358 94-200 (211)
121 PRK05834 hypothetical protein; 99.0 5.3E-10 1.1E-14 101.2 8.1 68 31-99 122-192 (194)
122 TIGR01544 HAD-SF-IE haloacid d 99.0 9.7E-09 2.1E-13 97.4 16.9 96 257-353 119-230 (277)
123 PRK06208 hypothetical protein; 99.0 7.1E-10 1.5E-14 105.4 8.3 72 31-105 164-238 (274)
124 PRK07044 aldolase II superfami 99.0 1.3E-09 2.9E-14 102.7 8.9 71 31-104 139-211 (252)
125 PF09419 PGP_phosphatase: Mito 99.0 3.7E-09 8E-14 93.1 11.0 86 266-363 66-166 (168)
126 PF06888 Put_Phosphatase: Puta 99.0 1.1E-08 2.4E-13 94.9 13.8 105 257-362 69-197 (234)
127 PRK06661 hypothetical protein; 98.9 2.8E-09 6E-14 99.2 8.7 63 41-106 137-200 (231)
128 PF12710 HAD: haloacid dehalog 98.9 2.1E-08 4.5E-13 89.6 14.2 88 262-351 92-192 (192)
129 KOG3040 Predicted sugar phosph 98.9 3E-09 6.5E-14 94.8 8.4 69 313-382 178-251 (262)
130 PRK10530 pyridoxal phosphate ( 98.9 4.7E-09 1E-13 99.4 10.4 115 259-380 137-258 (272)
131 PF00596 Aldolase_II: Class II 98.9 2E-09 4.3E-14 96.6 7.3 62 29-92 122-184 (184)
132 PRK13213 araD L-ribulose-5-pho 98.9 4.1E-09 8.9E-14 97.8 8.3 76 31-106 126-213 (231)
133 TIGR01545 YfhB_g-proteo haloac 98.9 1.5E-07 3.3E-12 86.3 17.8 99 258-358 93-199 (210)
134 COG0235 AraD Ribulose-5-phosph 98.9 1.2E-09 2.6E-14 100.9 3.3 85 7-102 111-199 (219)
135 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.9 6.6E-09 1.4E-13 97.3 8.1 89 259-355 24-116 (242)
136 TIGR01533 lipo_e_P4 5'-nucleot 98.8 3.2E-08 6.9E-13 93.7 11.2 85 257-350 116-204 (266)
137 COG1778 Low specificity phosph 98.8 6.7E-09 1.5E-13 88.8 5.8 82 267-359 43-124 (170)
138 PRK12347 sgbE L-ribulose-5-pho 98.8 1.8E-08 4E-13 93.7 9.0 58 41-98 143-204 (231)
139 PRK12348 sgaE L-ribulose-5-pho 98.8 2.2E-08 4.7E-13 93.1 9.1 61 40-100 140-202 (228)
140 TIGR00760 araD L-ribulose-5-ph 98.8 2.6E-08 5.7E-13 92.7 9.3 70 31-100 126-206 (231)
141 TIGR01512 ATPase-IB2_Cd heavy 98.8 1.3E-08 2.8E-13 106.1 7.9 110 257-382 360-473 (536)
142 PRK13145 araD L-ribulose-5-pho 98.7 3.4E-08 7.5E-13 92.0 8.4 59 40-98 142-204 (234)
143 KOG1615 Phosphoserine phosphat 98.7 2.7E-07 5.8E-12 81.7 13.3 93 257-352 86-191 (227)
144 PRK07090 class II aldolase/add 98.7 2.9E-08 6.3E-13 93.9 7.9 62 41-105 163-224 (260)
145 TIGR01525 ATPase-IB_hvy heavy 98.7 3.9E-08 8.5E-13 103.0 9.2 105 258-378 383-488 (556)
146 TIGR02632 RhaD_aldol-ADH rhamn 98.7 6.4E-08 1.4E-12 103.6 9.1 66 31-99 147-212 (676)
147 TIGR01511 ATPase-IB1_Cu copper 98.6 8E-08 1.7E-12 100.7 7.9 105 257-378 403-507 (562)
148 TIGR02251 HIF-SF_euk Dullard-l 98.6 3.3E-08 7.1E-13 87.1 3.7 97 258-361 41-139 (162)
149 PRK01158 phosphoglycolate phos 98.6 4.5E-07 9.8E-12 83.7 11.3 80 277-358 117-197 (230)
150 PRK08324 short chain dehydroge 98.5 2.3E-07 5E-12 99.5 9.2 67 31-97 156-222 (681)
151 PRK00192 mannosyl-3-phosphogly 98.5 1.8E-06 3.9E-11 82.3 13.0 89 268-361 141-234 (273)
152 TIGR01684 viral_ppase viral ph 98.5 6E-07 1.3E-11 85.3 8.4 57 262-320 149-206 (301)
153 COG4359 Uncharacterized conser 98.4 6.4E-06 1.4E-10 72.4 12.6 91 258-355 72-180 (220)
154 TIGR01456 CECR5 HAD-superfamil 98.4 5.1E-07 1.1E-11 88.2 6.3 70 314-383 231-316 (321)
155 TIGR01482 SPP-subfamily Sucros 98.4 3.5E-06 7.6E-11 77.4 11.2 79 277-358 109-189 (225)
156 PRK10671 copA copper exporting 98.3 1.3E-06 2.8E-11 95.8 8.6 85 258-355 649-733 (834)
157 KOG2882 p-Nitrophenyl phosphat 98.3 1.4E-06 3E-11 82.3 7.3 118 261-382 167-298 (306)
158 COG4996 Predicted phosphatase 98.3 1.4E-06 3.1E-11 72.3 6.3 78 258-344 40-126 (164)
159 PHA03398 viral phosphatase sup 98.3 3.9E-06 8.5E-11 79.9 9.9 82 262-344 151-262 (303)
160 COG4087 Soluble P-type ATPase 98.2 4E-06 8.7E-11 69.7 6.9 113 258-382 29-141 (152)
161 PF06941 NT5C: 5' nucleotidase 98.2 2.8E-06 6.2E-11 76.6 6.6 101 257-382 71-180 (191)
162 KOG3120 Predicted haloacid deh 98.2 2.2E-05 4.7E-10 71.1 12.0 105 257-362 82-210 (256)
163 TIGR01522 ATPase-IIA2_Ca golgi 98.2 3.8E-06 8.3E-11 92.6 8.1 118 259-382 528-665 (884)
164 TIGR01487 SPP-like sucrose-pho 98.2 1.5E-05 3.3E-10 73.0 10.5 96 277-379 109-205 (215)
165 TIGR01675 plant-AP plant acid 98.0 5.2E-05 1.1E-09 70.2 11.0 102 257-362 118-223 (229)
166 PF03767 Acid_phosphat_B: HAD 98.0 5.2E-05 1.1E-09 70.5 10.7 99 259-362 115-223 (229)
167 smart00775 LNS2 LNS2 domain. T 97.9 6E-05 1.3E-09 66.0 9.5 96 260-357 28-142 (157)
168 PRK11033 zntA zinc/cadmium/mer 97.9 2E-05 4.3E-10 85.3 6.8 84 258-356 567-650 (741)
169 TIGR01680 Veg_Stor_Prot vegeta 97.7 0.0002 4.4E-09 67.6 9.7 102 257-363 143-251 (275)
170 TIGR01116 ATPase-IIA1_Ca sarco 97.7 7.9E-05 1.7E-09 82.6 7.6 117 259-379 537-672 (917)
171 COG3700 AphA Acid phosphatase 97.7 0.00021 4.6E-09 62.7 8.4 94 260-365 115-215 (237)
172 PF05761 5_nucleotid: 5' nucle 97.6 0.00021 4.5E-09 72.6 9.1 108 255-363 179-326 (448)
173 COG0561 Cof Predicted hydrolas 97.5 0.00042 9.2E-09 65.4 8.9 44 315-359 187-230 (264)
174 PLN02645 phosphoglycolate phos 97.4 0.0013 2.8E-08 64.0 11.6 89 259-359 44-136 (311)
175 TIGR02250 FCP1_euk FCP1-like p 97.3 0.00079 1.7E-08 58.9 6.9 80 257-346 56-139 (156)
176 COG3347 Uncharacterized conser 97.2 0.0013 2.8E-08 64.2 8.5 61 31-94 160-220 (404)
177 PF11019 DUF2608: Protein of u 97.1 0.014 3E-07 55.2 13.9 102 259-363 81-211 (252)
178 TIGR01497 kdpB K+-transporting 97.0 0.0023 5.1E-08 68.2 8.8 87 259-358 446-532 (675)
179 PRK10513 sugar phosphate phosp 97.0 0.0023 5E-08 60.5 7.5 33 325-358 204-236 (270)
180 PRK15126 thiamin pyrimidine py 97.0 0.0021 4.5E-08 61.0 7.1 36 325-362 196-231 (272)
181 PF13344 Hydrolase_6: Haloacid 96.8 0.0033 7.1E-08 50.8 6.2 83 259-355 14-100 (101)
182 PRK14010 potassium-transportin 96.8 0.0056 1.2E-07 65.4 9.7 86 259-357 441-526 (673)
183 PRK10976 putative hydrolase; P 96.8 0.0038 8.2E-08 58.9 7.2 33 325-358 198-230 (266)
184 PRK01122 potassium-transportin 96.8 0.0063 1.4E-07 65.1 9.4 87 259-358 445-531 (679)
185 COG2217 ZntA Cation transport 96.7 0.0056 1.2E-07 65.7 8.6 86 258-356 536-621 (713)
186 PRK14502 bifunctional mannosyl 96.7 0.091 2E-06 55.9 17.3 51 316-368 612-665 (694)
187 PTZ00174 phosphomannomutase; P 96.7 0.0048 1E-07 57.9 7.0 20 137-156 1-20 (247)
188 TIGR02463 MPGP_rel mannosyl-3- 96.7 0.0076 1.7E-07 55.2 8.2 40 318-358 180-219 (221)
189 PRK03669 mannosyl-3-phosphogly 96.6 0.0054 1.2E-07 58.3 6.9 37 322-359 192-231 (271)
190 PLN02177 glycerol-3-phosphate 96.5 0.36 7.8E-06 50.0 20.1 91 260-357 111-211 (497)
191 COG5663 Uncharacterized conser 96.3 0.055 1.2E-06 47.3 10.6 90 260-366 73-166 (194)
192 PRK12702 mannosyl-3-phosphogly 96.3 0.01 2.2E-07 56.9 6.7 33 266-298 25-57 (302)
193 TIGR01647 ATPase-IIIA_H plasma 96.3 0.019 4.1E-07 62.6 9.6 98 258-358 441-558 (755)
194 TIGR01524 ATPase-IIIB_Mg magne 96.3 0.019 4.1E-07 63.6 9.6 98 259-358 515-626 (867)
195 TIGR01485 SPP_plant-cyano sucr 96.3 0.0089 1.9E-07 56.0 6.2 51 312-363 162-212 (249)
196 PLN02887 hydrolase family prot 96.2 0.011 2.4E-07 62.2 7.2 50 326-379 516-565 (580)
197 TIGR02461 osmo_MPG_phos mannos 96.2 0.014 3E-07 54.1 6.9 34 264-297 20-53 (225)
198 PF08235 LNS2: LNS2 (Lipin/Ned 96.2 0.038 8.2E-07 48.2 9.1 97 260-356 28-141 (157)
199 TIGR00685 T6PP trehalose-phosp 96.2 0.0069 1.5E-07 56.7 4.8 59 319-382 169-234 (244)
200 PRK10517 magnesium-transportin 96.1 0.026 5.7E-07 62.7 9.4 96 259-358 550-661 (902)
201 PRK15122 magnesium-transportin 96.0 0.026 5.7E-07 62.7 9.4 97 259-357 550-660 (903)
202 TIGR01517 ATPase-IIB_Ca plasma 95.9 0.032 6.9E-07 62.4 9.3 99 259-358 579-692 (941)
203 COG0647 NagD Predicted sugar p 95.9 0.061 1.3E-06 51.2 9.9 37 259-295 24-63 (269)
204 KOG2961 Predicted hydrolase (H 95.8 0.069 1.5E-06 46.0 8.8 96 259-363 61-169 (190)
205 KOG2134 Polynucleotide kinase 95.7 0.043 9.2E-07 54.0 8.3 96 259-358 104-230 (422)
206 TIGR01456 CECR5 HAD-superfamil 95.7 0.017 3.7E-07 56.4 5.6 14 143-156 2-15 (321)
207 TIGR01484 HAD-SF-IIB HAD-super 95.7 0.016 3.5E-07 52.2 4.9 45 313-358 159-203 (204)
208 PLN02423 phosphomannomutase 95.6 0.033 7.3E-07 52.2 7.0 37 325-363 193-233 (245)
209 PF08282 Hydrolase_3: haloacid 95.6 0.03 6.6E-07 51.3 6.5 35 323-358 192-226 (254)
210 TIGR01452 PGP_euk phosphoglyco 95.5 0.05 1.1E-06 52.0 7.8 88 259-358 18-108 (279)
211 TIGR02471 sucr_syn_bact_C sucr 95.5 0.015 3.2E-07 54.0 3.9 49 312-362 154-202 (236)
212 TIGR01523 ATPase-IID_K-Na pota 95.3 0.057 1.2E-06 60.9 8.8 97 259-358 646-769 (1053)
213 TIGR01494 ATPase_P-type ATPase 95.0 0.11 2.4E-06 53.8 9.2 83 258-356 346-428 (499)
214 PF03031 NIF: NLI interacting 94.9 0.021 4.6E-07 49.5 3.0 83 258-347 35-119 (159)
215 COG0474 MgtA Cation transport 94.9 0.11 2.4E-06 58.0 9.2 103 258-361 546-665 (917)
216 TIGR00099 Cof-subfamily Cof su 94.9 0.033 7.2E-07 52.2 4.5 61 315-379 186-246 (256)
217 KOG0207 Cation transport ATPas 94.7 0.1 2.2E-06 56.6 7.9 85 259-356 723-807 (951)
218 COG3769 Predicted hydrolase (H 94.6 0.14 3E-06 47.0 7.4 97 260-361 135-235 (274)
219 TIGR01106 ATPase-IIC_X-K sodiu 94.5 0.095 2.1E-06 59.0 7.7 99 259-358 568-707 (997)
220 KOG2470 Similar to IMP-GMP spe 94.3 0.057 1.2E-06 52.4 4.4 103 259-362 240-376 (510)
221 PRK10513 sugar phosphate phosp 93.9 0.066 1.4E-06 50.5 4.1 33 139-174 1-33 (270)
222 COG3882 FkbH Predicted enzyme 93.7 0.19 4.1E-06 51.0 7.1 93 259-355 255-348 (574)
223 COG2503 Predicted secreted aci 93.7 0.18 3.9E-06 46.8 6.3 89 257-350 120-209 (274)
224 COG4030 Uncharacterized protei 93.7 4.2 9.2E-05 37.6 15.0 40 258-298 82-121 (315)
225 PRK10187 trehalose-6-phosphate 93.6 0.14 3.1E-06 48.6 5.9 43 319-362 176-221 (266)
226 COG5610 Predicted hydrolase (H 93.4 0.22 4.8E-06 50.1 6.9 99 258-360 96-201 (635)
227 TIGR01657 P-ATPase-V P-type AT 93.1 0.58 1.3E-05 53.1 10.7 40 259-298 656-695 (1054)
228 PLN02499 glycerol-3-phosphate 92.6 3.2 6.9E-05 42.8 14.1 87 267-362 101-198 (498)
229 TIGR01652 ATPase-Plipid phosph 92.5 0.16 3.5E-06 57.6 5.2 41 258-298 630-670 (1057)
230 PRK10976 putative hydrolase; P 92.2 0.18 3.9E-06 47.4 4.4 32 140-174 1-32 (266)
231 TIGR01689 EcbF-BcbF capsule bi 91.8 0.087 1.9E-06 44.3 1.5 28 260-287 25-52 (126)
232 PF05822 UMPH-1: Pyrimidine 5' 91.5 1.1 2.5E-05 41.9 8.7 99 257-357 88-203 (246)
233 KOG0202 Ca2+ transporting ATPa 91.5 0.66 1.4E-05 50.1 7.9 99 258-357 583-700 (972)
234 TIGR01457 HAD-SF-IIA-hyp2 HAD- 90.8 1.7 3.8E-05 40.7 9.5 41 259-299 17-60 (249)
235 PRK09484 3-deoxy-D-manno-octul 90.5 0.12 2.7E-06 46.1 1.3 16 140-155 20-35 (183)
236 TIGR01486 HAD-SF-IIB-MPGP mann 90.0 0.81 1.8E-05 42.9 6.5 44 315-359 174-219 (256)
237 PLN02580 trehalose-phosphatase 90.0 0.52 1.1E-05 47.1 5.3 34 260-294 142-175 (384)
238 PLN02887 hydrolase family prot 89.9 0.38 8.3E-06 50.8 4.6 34 139-175 306-339 (580)
239 PF08282 Hydrolase_3: haloacid 89.9 0.45 9.8E-06 43.4 4.6 28 144-174 1-28 (254)
240 TIGR02461 osmo_MPG_phos mannos 89.9 0.36 7.9E-06 44.6 3.9 42 314-358 180-223 (225)
241 PRK15126 thiamin pyrimidine py 89.9 0.46 1E-05 44.9 4.7 32 140-174 1-32 (272)
242 TIGR01681 HAD-SF-IIIC HAD-supe 89.8 0.35 7.5E-06 40.5 3.4 15 142-156 1-15 (128)
243 PRK03669 mannosyl-3-phosphogly 89.1 1.1 2.4E-05 42.4 6.7 34 137-173 3-36 (271)
244 TIGR01458 HAD-SF-IIA-hyp3 HAD- 88.7 0.39 8.5E-06 45.3 3.3 40 259-298 21-63 (257)
245 TIGR01658 EYA-cons_domain eyes 88.5 2.3 5.1E-05 39.7 8.0 80 278-363 178-259 (274)
246 PRK10444 UMP phosphatase; Prov 88.4 0.4 8.7E-06 45.1 3.1 37 259-295 17-53 (248)
247 KOG2469 IMP-GMP specific 5'-nu 88.1 1.1 2.3E-05 44.8 5.8 105 258-363 197-335 (424)
248 TIGR01460 HAD-SF-IIA Haloacid 87.9 1.9 4.2E-05 40.0 7.3 84 259-356 14-102 (236)
249 PRK14501 putative bifunctional 87.0 1.1 2.4E-05 48.8 5.9 48 330-382 668-715 (726)
250 TIGR02245 HAD_IIID1 HAD-superf 86.6 3.9 8.5E-05 37.0 8.3 91 260-356 46-151 (195)
251 COG2216 KdpB High-affinity K+ 86.2 2.2 4.8E-05 43.9 7.0 85 259-356 447-531 (681)
252 PLN03190 aminophospholipid tra 86.1 1 2.2E-05 51.6 5.2 39 258-296 725-763 (1178)
253 PF05152 DUF705: Protein of un 85.7 3.5 7.5E-05 39.4 7.7 85 260-344 143-256 (297)
254 PLN02382 probable sucrose-phos 85.3 1.7 3.7E-05 44.1 5.9 45 318-363 176-223 (413)
255 PF03031 NIF: NLI interacting 83.5 0.53 1.2E-05 40.6 1.2 16 142-157 1-16 (159)
256 KOG3699 Cytoskeletal protein A 83.5 1.4 3E-05 45.9 4.3 47 54-101 191-237 (598)
257 PF13344 Hydrolase_6: Haloacid 83.0 1 2.2E-05 36.2 2.5 26 144-173 1-26 (101)
258 KOG2882 p-Nitrophenyl phosphat 82.6 4.1 9E-05 39.2 6.8 94 259-363 38-134 (306)
259 PF05116 S6PP: Sucrose-6F-phos 82.6 1.6 3.5E-05 40.9 4.1 44 318-363 166-209 (247)
260 PRK00192 mannosyl-3-phosphogly 81.9 2.3 5.1E-05 40.2 5.0 40 260-299 22-61 (273)
261 COG4850 Uncharacterized conser 81.9 7.7 0.00017 37.7 8.3 87 257-348 194-292 (373)
262 TIGR00685 T6PP trehalose-phosp 81.6 1.4 2.9E-05 41.2 3.2 33 142-174 4-38 (244)
263 PRK10187 trehalose-6-phosphate 81.3 2.6 5.6E-05 40.0 5.0 14 142-155 15-28 (266)
264 KOG4549 Magnesium-dependent ph 78.4 10 0.00022 31.9 6.8 83 258-344 43-132 (144)
265 TIGR02245 HAD_IIID1 HAD-superf 76.6 1.3 2.7E-05 40.2 1.3 17 140-156 20-36 (195)
266 TIGR02463 MPGP_rel mannosyl-3- 76.0 5.2 0.00011 36.3 5.2 37 262-298 19-55 (221)
267 COG0731 Fe-S oxidoreductases [ 75.5 9.2 0.0002 36.9 6.8 38 257-294 90-128 (296)
268 TIGR00099 Cof-subfamily Cof su 73.9 6.3 0.00014 36.7 5.3 39 260-298 17-55 (256)
269 cd04728 ThiG Thiazole synthase 72.9 55 0.0012 30.7 11.0 97 259-363 104-206 (248)
270 PRK08324 short chain dehydroge 72.8 18 0.0004 39.1 9.2 53 54-106 344-396 (681)
271 TIGR00213 GmhB_yaeD D,D-heptos 72.8 1.7 3.7E-05 38.3 1.1 13 142-154 2-14 (176)
272 TIGR01487 SPP-like sucrose-pho 70.8 7.5 0.00016 35.2 4.9 39 260-298 19-57 (215)
273 PRK11840 bifunctional sulfur c 70.6 49 0.0011 32.4 10.6 94 259-363 178-280 (326)
274 TIGR01668 YqeG_hyp_ppase HAD s 70.4 4.4 9.6E-05 35.5 3.2 30 139-170 23-52 (170)
275 KOG0207 Cation transport ATPas 70.0 11 0.00023 41.6 6.4 47 312-361 721-768 (951)
276 KOG0323 TFIIF-interacting CTD 69.5 5.8 0.00013 42.2 4.3 42 255-297 197-238 (635)
277 PLN02205 alpha,alpha-trehalose 69.5 4.3 9.4E-05 45.0 3.5 34 320-354 765-801 (854)
278 PLN03017 trehalose-phosphatase 68.8 2.7 5.8E-05 41.9 1.6 13 143-155 113-125 (366)
279 COG5083 SMP2 Uncharacterized p 67.8 3.6 7.8E-05 41.5 2.2 19 140-158 374-392 (580)
280 TIGR01486 HAD-SF-IIB-MPGP mann 67.4 12 0.00026 34.9 5.6 38 261-298 18-55 (256)
281 PRK01158 phosphoglycolate phos 67.0 11 0.00023 34.3 5.2 40 260-299 21-60 (230)
282 PF13580 SIS_2: SIS domain; PD 67.0 66 0.0014 27.0 9.7 98 262-361 22-137 (138)
283 TIGR01482 SPP-subfamily Sucros 66.0 12 0.00026 33.8 5.3 38 260-297 16-53 (225)
284 PLN02151 trehalose-phosphatase 65.8 3.3 7.1E-05 41.0 1.5 13 143-155 100-112 (354)
285 PRK06769 hypothetical protein; 65.7 4.7 0.0001 35.5 2.4 16 140-155 3-18 (173)
286 KOG3189 Phosphomannomutase [Li 65.5 5.7 0.00012 36.0 2.8 29 141-172 11-39 (252)
287 COG1877 OtsB Trehalose-6-phosp 64.1 3.7 7.9E-05 39.1 1.4 14 142-155 19-32 (266)
288 PRK10530 pyridoxal phosphate ( 63.0 16 0.00034 34.1 5.6 39 260-298 21-59 (272)
289 COG0561 Cof Predicted hydrolas 62.3 12 0.00027 34.8 4.7 41 260-300 21-61 (264)
290 TIGR01689 EcbF-BcbF capsule bi 62.1 17 0.00038 30.4 5.0 13 142-154 2-14 (126)
291 PRK00208 thiG thiazole synthas 62.1 1.2E+02 0.0027 28.5 11.0 97 259-363 104-206 (250)
292 KOG1618 Predicted phosphatase 61.5 6.4 0.00014 38.3 2.5 50 314-363 269-342 (389)
293 PF14226 DIOX_N: non-haem diox 61.3 9.3 0.0002 30.8 3.2 54 31-92 1-57 (116)
294 TIGR01261 hisB_Nterm histidino 61.0 4.8 0.0001 35.2 1.5 14 142-155 2-15 (161)
295 KOG3107 Predicted haloacid deh 60.9 34 0.00073 34.2 7.3 44 318-363 410-453 (468)
296 TIGR01686 FkbH FkbH-like domai 60.3 5.4 0.00012 38.8 1.9 16 140-155 2-17 (320)
297 TIGR01484 HAD-SF-IIB HAD-super 60.1 13 0.00028 33.1 4.3 38 259-296 17-54 (204)
298 PF02358 Trehalose_PPase: Treh 60.0 8.5 0.00019 35.5 3.1 39 318-356 166-206 (235)
299 TIGR02251 HIF-SF_euk Dullard-l 59.9 5.5 0.00012 34.7 1.7 16 142-157 2-17 (162)
300 PF05152 DUF705: Protein of un 59.4 10 0.00022 36.4 3.4 25 28-52 54-78 (297)
301 KOG3040 Predicted sugar phosph 59.0 14 0.00029 34.0 4.0 37 260-296 24-60 (262)
302 smart00577 CPDc catalytic doma 58.6 5.3 0.00012 34.1 1.4 15 142-156 3-17 (148)
303 COG3347 Uncharacterized conser 58.4 36 0.00077 34.0 7.1 59 42-100 314-381 (404)
304 CHL00162 thiG thiamin biosynth 57.9 1.3E+02 0.0029 28.4 10.5 97 259-363 118-220 (267)
305 PLN03063 alpha,alpha-trehalose 57.6 5 0.00011 44.3 1.3 97 33-154 423-520 (797)
306 PLN02334 ribulose-phosphate 3- 57.0 1.4E+02 0.0031 27.3 10.8 98 262-363 102-204 (229)
307 KOG0204 Calcium transporting A 55.3 54 0.0012 36.3 8.3 96 258-357 646-761 (1034)
308 PRK13125 trpA tryptophan synth 55.1 1.2E+02 0.0026 28.2 10.0 96 262-363 116-216 (244)
309 KOG0209 P-type ATPase [Inorgan 53.9 19 0.00042 39.4 4.8 39 258-296 674-712 (1160)
310 PRK13762 tRNA-modifying enzyme 53.9 24 0.00052 34.5 5.2 29 259-287 142-170 (322)
311 PLN03064 alpha,alpha-trehalose 53.5 5.8 0.00013 44.3 1.0 97 33-154 507-604 (934)
312 COG3769 Predicted hydrolase (H 53.4 23 0.0005 32.8 4.6 38 263-300 27-64 (274)
313 PLN02750 oxidoreductase, 2OG-F 51.9 33 0.00072 33.8 5.9 57 30-94 26-86 (345)
314 PF05690 ThiG: Thiazole biosyn 51.5 1.8E+02 0.0038 27.3 10.0 97 259-363 104-206 (247)
315 PF03681 UPF0150: Uncharacteri 51.2 14 0.00031 25.0 2.3 20 66-85 23-43 (48)
316 PF05116 S6PP: Sucrose-6F-phos 50.1 15 0.00033 34.3 3.1 28 141-175 2-29 (247)
317 TIGR00262 trpA tryptophan synt 48.9 1.7E+02 0.0037 27.5 10.0 98 259-363 124-229 (256)
318 PF06378 DUF1071: Protein of u 48.6 8.7 0.00019 33.7 1.1 47 27-78 82-135 (164)
319 PRK00994 F420-dependent methyl 47.9 2E+02 0.0043 27.0 9.7 89 268-362 23-117 (277)
320 PF06506 PrpR_N: Propionate ca 47.7 17 0.00037 32.0 2.9 87 263-363 65-152 (176)
321 PHA02575 1 deoxynucleoside mon 47.5 1.1E+02 0.0024 28.4 8.1 49 316-364 134-187 (227)
322 TIGR02329 propionate_PrpR prop 46.6 86 0.0019 32.9 8.3 87 263-363 85-172 (526)
323 PF04413 Glycos_transf_N: 3-De 46.1 1.2E+02 0.0025 27.1 8.0 88 263-363 36-127 (186)
324 PLN02997 flavonol synthase 45.7 20 0.00044 35.0 3.3 72 15-94 16-89 (325)
325 KOG3128 Uncharacterized conser 45.7 20 0.00044 33.8 3.0 96 258-353 137-247 (298)
326 PLN02515 naringenin,2-oxogluta 44.0 46 0.00099 33.1 5.5 57 30-94 37-99 (358)
327 PLN02912 oxidoreductase, 2OG-F 43.9 52 0.0011 32.5 5.9 55 30-92 41-99 (348)
328 TIGR03470 HpnH hopanoid biosyn 43.9 1.7E+02 0.0037 28.4 9.5 28 259-286 84-111 (318)
329 PRK14501 putative bifunctional 43.4 30 0.00064 37.8 4.4 36 260-295 515-551 (726)
330 TIGR02250 FCP1_euk FCP1-like p 43.1 15 0.00032 31.9 1.7 18 141-158 6-23 (156)
331 TIGR02495 NrdG2 anaerobic ribo 43.1 1.3E+02 0.0028 26.4 7.9 27 260-286 75-101 (191)
332 PTZ00273 oxidase reductase; Pr 42.3 43 0.00093 32.6 5.0 57 30-94 5-68 (320)
333 KOG2961 Predicted hydrolase (H 42.2 23 0.0005 30.8 2.7 16 140-155 42-57 (190)
334 PHA00026 cp coat protein 42.1 17 0.00037 29.0 1.7 40 28-68 89-129 (129)
335 PLN02485 oxidoreductase 42.0 51 0.0011 32.2 5.5 47 40-94 31-77 (329)
336 COG0241 HisB Histidinol phosph 41.6 16 0.00036 32.6 1.8 15 140-154 4-18 (181)
337 PF04995 CcmD: Heme exporter p 40.7 5.2 0.00011 27.2 -1.2 8 64-71 2-9 (46)
338 PHA02530 pseT polynucleotide k 39.7 27 0.00059 33.2 3.1 16 141-156 158-173 (300)
339 TIGR02632 RhaD_aldol-ADH rhamn 39.3 57 0.0012 35.3 5.8 52 55-106 337-388 (676)
340 PRK11070 ssDNA exonuclease Rec 39.3 4.4E+02 0.0096 28.1 12.2 99 259-363 50-160 (575)
341 PLN02299 1-aminocyclopropane-1 39.1 67 0.0015 31.3 5.8 57 31-95 7-67 (321)
342 PRK13717 conjugal transfer pro 38.6 41 0.00088 28.2 3.5 15 139-153 43-57 (128)
343 PLN02591 tryptophan synthase 38.3 3.3E+02 0.0071 25.6 10.0 101 259-363 115-220 (250)
344 PLN02580 trehalose-phosphatase 36.8 60 0.0013 32.6 5.1 59 318-382 302-368 (384)
345 PRK15424 propionate catabolism 36.7 1.5E+02 0.0032 31.3 8.2 86 263-362 95-181 (538)
346 PLN02704 flavonol synthase 36.6 80 0.0017 31.0 5.9 58 29-94 41-99 (335)
347 PLN02382 probable sucrose-phos 36.1 26 0.00056 35.5 2.4 15 141-155 9-23 (413)
348 PRK08005 epimerase; Validated 35.7 3.5E+02 0.0075 24.7 10.4 97 261-363 92-193 (210)
349 TIGR03141 cytochro_ccmD heme e 34.4 7.6 0.00016 26.3 -1.2 9 64-72 3-11 (45)
350 PLN02639 oxidoreductase, 2OG-F 33.8 98 0.0021 30.4 6.0 56 30-93 37-93 (337)
351 PRK08883 ribulose-phosphate 3- 33.7 3.6E+02 0.0079 24.7 9.4 100 259-363 90-197 (220)
352 COG2022 ThiG Uncharacterized e 33.3 4.1E+02 0.009 24.9 9.8 97 259-363 111-213 (262)
353 TIGR03365 Bsubt_queE 7-cyano-7 32.5 38 0.00083 31.4 2.8 29 260-288 85-113 (238)
354 PLN02403 aminocyclopropanecarb 32.3 50 0.0011 32.0 3.6 55 31-93 3-61 (303)
355 PF05761 5_nucleotid: 5' nucle 31.9 49 0.0011 34.0 3.7 38 137-176 8-45 (448)
356 PF06189 5-nucleotidase: 5'-nu 31.6 1.8E+02 0.0039 27.6 7.0 88 259-363 164-260 (264)
357 TIGR01485 SPP_plant-cyano sucr 31.5 67 0.0015 29.7 4.3 36 262-297 24-59 (249)
358 PRK10076 pyruvate formate lyas 31.5 79 0.0017 28.9 4.6 37 260-296 51-90 (213)
359 KOG1618 Predicted phosphatase 29.7 1.6E+02 0.0034 29.0 6.3 86 259-360 51-145 (389)
360 cd06589 GH31 The enzymes of gl 29.4 52 0.0011 31.0 3.2 31 256-286 60-90 (265)
361 COG4850 Uncharacterized conser 29.3 4.8E+02 0.01 25.8 9.5 62 259-329 237-301 (373)
362 TIGR03123 one_C_unchar_1 proba 29.3 49 0.0011 32.3 3.0 117 34-160 29-147 (318)
363 PRK14502 bifunctional mannosyl 29.0 93 0.002 33.7 5.2 39 260-298 434-472 (694)
364 PRK05446 imidazole glycerol-ph 28.7 48 0.001 32.9 2.9 16 140-155 1-16 (354)
365 PF04123 DUF373: Domain of unk 28.4 1.3E+02 0.0028 29.8 5.7 74 263-362 52-129 (344)
366 PRK00043 thiE thiamine-phospha 27.9 4.2E+02 0.0092 23.3 9.3 88 265-363 94-190 (212)
367 KOG0208 Cation transport ATPas 27.5 1.1E+02 0.0024 34.5 5.4 91 262-355 650-744 (1140)
368 TIGR02668 moaA_archaeal probab 27.4 1.7E+02 0.0036 27.9 6.4 28 259-286 68-96 (302)
369 KOG0206 P-type ATPase [General 27.2 2.9E+02 0.0064 31.9 8.9 39 258-296 650-688 (1151)
370 COG0761 lytB 4-Hydroxy-3-methy 27.2 2.4E+02 0.0053 27.2 7.1 95 259-368 168-271 (294)
371 PLN02758 oxidoreductase, 2OG-F 26.8 1.2E+02 0.0027 30.0 5.4 56 30-93 52-114 (361)
372 TIGR01101 V_ATP_synt_F vacuola 26.6 1.8E+02 0.0038 24.0 5.4 66 262-329 46-112 (115)
373 PLN02276 gibberellin 20-oxidas 26.4 1.2E+02 0.0025 30.2 5.2 59 29-95 39-104 (361)
374 cd04726 KGPDC_HPS 3-Keto-L-gul 26.3 4.5E+02 0.0097 23.1 10.1 93 264-363 92-188 (202)
375 COG0378 HypB Ni2+-binding GTPa 26.2 3.4E+02 0.0074 24.7 7.5 73 265-344 31-106 (202)
376 COG0541 Ffh Signal recognition 26.0 2.3E+02 0.0051 29.0 7.1 101 259-362 138-248 (451)
377 PF03808 Glyco_tran_WecB: Glyc 25.8 2.6E+02 0.0057 24.4 6.8 81 263-351 36-120 (172)
378 KOG1605 TFIIF-interacting CTD 25.4 38 0.00082 32.2 1.4 15 142-156 90-104 (262)
379 smart00052 EAL Putative diguan 25.4 3.5E+02 0.0077 24.0 7.9 85 264-358 135-228 (241)
380 PLN02205 alpha,alpha-trehalose 25.2 96 0.0021 34.7 4.7 45 32-76 496-547 (854)
381 PF13911 AhpC-TSA_2: AhpC/TSA 24.9 2.8E+02 0.006 22.0 6.4 31 266-296 4-34 (115)
382 TIGR02826 RNR_activ_nrdG3 anae 24.5 1E+02 0.0022 26.4 3.8 36 261-296 74-110 (147)
383 cd00956 Transaldolase_FSA Tran 24.5 5.2E+02 0.011 23.5 8.7 100 256-362 82-186 (211)
384 PRK13361 molybdenum cofactor b 24.2 2.2E+02 0.0047 27.7 6.6 28 259-286 73-102 (329)
385 PF13540 RCC1_2: Regulator of 24.2 57 0.0012 19.8 1.6 16 58-73 11-26 (30)
386 PLN02951 Molybderin biosynthes 24.0 2.3E+02 0.0051 28.2 6.8 28 259-286 118-147 (373)
387 KOG0780 Signal recognition par 23.9 4.9E+02 0.011 26.5 8.7 100 259-361 139-248 (483)
388 cd06600 GH31_MGAM-like This fa 23.8 84 0.0018 30.5 3.5 30 255-284 57-86 (317)
389 cd06592 GH31_glucosidase_KIAA1 23.7 79 0.0017 30.5 3.3 28 257-284 65-92 (303)
390 cd00733 GlyRS_alpha_core Class 23.6 72 0.0016 30.0 2.8 43 315-357 80-128 (279)
391 PRK05752 uroporphyrinogen-III 23.5 2.8E+02 0.0061 25.7 7.0 23 259-281 10-32 (255)
392 PRK00286 xseA exodeoxyribonucl 23.4 4.1E+02 0.009 26.9 8.7 62 277-341 137-199 (438)
393 PF04295 GD_AH_C: D-galactarat 23.3 1.7E+02 0.0037 29.6 5.6 85 39-125 68-170 (396)
394 COG0263 ProB Glutamate 5-kinas 23.3 2.7E+02 0.0058 27.8 6.8 26 262-287 31-56 (369)
395 PRK15317 alkyl hydroperoxide r 23.2 2.9E+02 0.0063 28.6 7.7 100 257-362 127-242 (517)
396 cd05008 SIS_GlmS_GlmD_1 SIS (S 23.2 69 0.0015 25.9 2.5 30 261-290 59-88 (126)
397 cd06603 GH31_GANC_GANAB_alpha 23.1 90 0.0019 30.6 3.6 30 255-284 57-86 (339)
398 PLN03176 flavanone-3-hydroxyla 22.7 1.8E+02 0.0038 24.0 4.8 55 30-92 37-97 (120)
399 PRK09348 glyQ glycyl-tRNA synt 22.7 77 0.0017 29.9 2.8 43 315-357 84-132 (283)
400 PLN02588 glycerol-3-phosphate 22.5 38 0.00082 35.3 0.8 23 141-167 50-72 (525)
401 cd06604 GH31_glucosidase_II_Ma 22.5 91 0.002 30.5 3.5 33 251-283 53-85 (339)
402 PLN02393 leucoanthocyanidin di 22.4 76 0.0016 31.5 3.0 36 29-67 50-92 (362)
403 COG1015 DeoB Phosphopentomutas 22.4 4.7E+02 0.01 26.2 8.2 81 260-341 222-331 (397)
404 KOG2469 IMP-GMP specific 5'-nu 22.3 41 0.00089 33.8 1.0 18 139-156 25-42 (424)
405 PRK00407 hypothetical protein; 22.2 64 0.0014 27.5 2.1 18 64-81 12-29 (139)
406 cd06601 GH31_lyase_GLase GLase 22.1 1E+02 0.0022 30.2 3.8 35 250-284 52-86 (332)
407 cd06533 Glyco_transf_WecG_TagA 22.1 3.3E+02 0.0071 23.7 6.7 80 264-351 35-118 (171)
408 PF04131 NanE: Putative N-acet 21.9 3.6E+02 0.0077 24.4 6.8 97 258-362 76-174 (192)
409 cd05014 SIS_Kpsf KpsF-like pro 21.9 84 0.0018 25.4 2.7 31 260-290 59-89 (128)
410 PTZ00174 phosphomannomutase; P 21.8 72 0.0016 29.5 2.6 38 319-361 190-231 (247)
411 PRK07938 enoyl-CoA hydratase; 21.7 2.6E+02 0.0056 26.0 6.3 41 36-77 23-67 (249)
412 COG3882 FkbH Predicted enzyme 21.6 49 0.0011 34.2 1.4 39 318-361 488-526 (574)
413 cd06595 GH31_xylosidase_XylS-l 21.1 96 0.0021 29.7 3.3 30 255-284 67-96 (292)
414 TIGR03140 AhpF alkyl hydropero 20.9 3.3E+02 0.0072 28.2 7.5 101 257-361 128-242 (515)
415 PF06117 DUF957: Enterobacteri 20.8 1E+02 0.0022 22.6 2.5 15 142-156 25-39 (65)
416 TIGR00236 wecB UDP-N-acetylglu 20.8 5E+02 0.011 25.1 8.4 97 264-363 16-119 (365)
417 COG0106 HisA Phosphoribosylfor 20.7 6.8E+02 0.015 23.5 8.6 73 263-363 148-223 (241)
418 cd06593 GH31_xylosidase_YicI Y 20.7 95 0.0021 29.8 3.2 27 257-283 61-87 (308)
419 PLN02156 gibberellin 2-beta-di 20.7 1.9E+02 0.0041 28.4 5.3 58 28-95 24-81 (335)
420 cd06602 GH31_MGAM_SI_GAA This 20.4 91 0.002 30.6 3.0 31 254-284 56-88 (339)
421 PLN02216 protein SRG1 20.4 1.1E+02 0.0024 30.4 3.6 36 30-68 52-92 (357)
422 PLN00417 oxidoreductase, 2OG-F 20.0 2.2E+02 0.0048 28.1 5.7 58 29-94 43-106 (348)
No 1
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=100.00 E-value=1.5e-36 Score=279.41 Aligned_cols=218 Identities=44% Similarity=0.760 Sum_probs=186.1
Q ss_pred CeEEEecccCCCccccccchhhhhHHHHHHHhHHhhhcCChhhHHHHHHHHHHHHHHhhhccCCCCCCCCCCCChHHHHH
Q 016771 141 PRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIA 220 (383)
Q Consensus 141 ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (383)
+|+|+||++||+++.+||++.||||+++++..|+..+|... .++.+++... .+ . . +
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~----~~~~~~~~~~------------~~--~--~----~ 56 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST----IVENLRELGK------------TP--E--E----L 56 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH----HHHHHHHhcc------------CC--c--H----H
Confidence 58999999999999999999999999999999999988765 2333332110 11 1 1 4
Q ss_pred HHHHHHHHHHhhhhcchHHHHHhHHHHHHhhhccccccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCC
Q 016771 221 ALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD 300 (383)
Q Consensus 221 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~ 300 (383)
.+..++..|+..|+|.+.+|++||.+|+++|.......++|||+.++|++|+++|++++|+||++...++.++++.+..+
T Consensus 57 ~~~~~~~~~~~~d~k~~~lk~lqg~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~ 136 (220)
T TIGR01691 57 ILLRKLHAEMDKDRKATPLKTLQGLIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGN 136 (220)
T ss_pred HHHHHHHHHHHcCCCcchHHHHHHHHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccc
Confidence 55666677999999999999999999999999988888999999999999999999999999999999999998876556
Q ss_pred cccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCC-CC-CeeeC
Q 016771 301 LRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPEN-HG-FKTIN 378 (383)
Q Consensus 301 l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~-~~-d~vI~ 378 (383)
+.++|+++|+.....||+|++|..+++++|++ |++|+||||+..|+.+|+++||+++++.|+++.+.... .+ ..+|+
T Consensus 137 L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~ 215 (220)
T TIGR01691 137 LTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFP 215 (220)
T ss_pred hhhhcceEEEeCcccCCCHHHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeec
Confidence 77778888877667899999999999999998 99999999999999999999999999999987644332 22 67899
Q ss_pred CccCC
Q 016771 379 SFAEI 383 (383)
Q Consensus 379 sl~eL 383 (383)
||.++
T Consensus 216 ~~~~~ 220 (220)
T TIGR01691 216 DLNAV 220 (220)
T ss_pred CcccC
Confidence 98864
No 2
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=100.00 E-value=1.5e-32 Score=236.80 Aligned_cols=222 Identities=44% Similarity=0.759 Sum_probs=198.3
Q ss_pred CCeEEEecccCCCccccccchhhhhHHHHHHHhHHhhhcCChhhHHHHHHHHHHHHHHhhhccCCCCCCCCCCCChHHHH
Q 016771 140 FPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVI 219 (383)
Q Consensus 140 ~ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (383)
|.|+|+.|++||..+.+||++.+|||+.+++.+|+++++...+....+......++ ..+. .
T Consensus 3 m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v~~~v~~v~~e~g----------------~~~s---~ 63 (229)
T COG4229 3 MVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEVKKIVDEVLSEFG----------------IANS---E 63 (229)
T ss_pred chhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChhhHHHHHHHHHhC----------------ccch---H
Confidence 56999999999999999999999999999999999999987766555555444322 1121 2
Q ss_pred HHHHHHHHHHHhhhhcchHHHHHhHHHHHHhhhccccccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCC
Q 016771 220 AALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG 299 (383)
Q Consensus 220 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~ 299 (383)
+++...+..|+..|.|.+.+|++|+.+|..+|+.+....++||++.+.|++++++|.+++|.|+++...++.++.+...+
T Consensus 64 E~lva~~~~wiaed~K~t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~ag 143 (229)
T COG4229 64 EALVALLLEWIAEDSKDTPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAG 143 (229)
T ss_pred HHHHHHHHHHHhcccccchHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccc
Confidence 44555555689999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCC
Q 016771 300 DLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 379 (383)
Q Consensus 300 ~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~s 379 (383)
++..+|+||||...+.|.....|.++++..|++ |.+++|+.|.+..+.||+.+||+++++.|+++.+.....+..+++|
T Consensus 144 dL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~-p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~s 222 (229)
T COG4229 144 DLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLP-PAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKS 222 (229)
T ss_pred cHHhhhcceeeccccccccchhHHHHHHhcCCC-chheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeec
Confidence 888999999999889999999999999999998 9999999999999999999999999999999888877666788888
Q ss_pred cc
Q 016771 380 FA 381 (383)
Q Consensus 380 l~ 381 (383)
|+
T Consensus 223 f~ 224 (229)
T COG4229 223 FE 224 (229)
T ss_pred hh
Confidence 86
No 3
>KOG2631 consensus Class II aldolase/adducin N-terminal domain protein [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.2e-29 Score=222.15 Aligned_cols=107 Identities=59% Similarity=1.035 Sum_probs=98.6
Q ss_pred CCCCCCCeEEeCCceeeeecCCC------CccceEEEeeecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCH
Q 016771 1 MINPMSKEFRITHMEMIKGIKGH------GYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSW 74 (383)
Q Consensus 1 ~~~~~~~~~~~~~~e~~k~~~~~------~~~~~~~ipv~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~ 74 (383)
|+|| +++|+++++|||||++.- .+.|+++||||+|++.+.+|.+.+..++..||+++||||||||+|+||+||
T Consensus 122 ~L~~-~~~F~ith~EmIKgI~~~~~g~~~~y~D~L~vPIIeNt~~E~~L~D~l~~aie~YP~tcAVLVR~HGvyvWG~TW 200 (238)
T KOG2631|consen 122 LLFP-SDEFRITHQEMIKGIPKGNSGGYLPYFDTLVVPIIENTPSESDLKDSLKKAIELYPDTCAVLVRRHGVYVWGPTW 200 (238)
T ss_pred hhcc-cceeEeehHHHHhcCCCCCCCccccccceEEEeeecCCchHHHHHHHHHHHHHhCCcceEEEEecCcEEEecCcH
Confidence 5788 999999999999999862 367999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccc
Q 016771 75 INAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRN 111 (383)
Q Consensus 75 ~~a~~~~e~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 111 (383)
++||.+.||+||||++.++++++|+| +.+++.++
T Consensus 201 ekaKt~~EcydYLfelaikm~klgip---p~~~~~~~ 234 (238)
T KOG2631|consen 201 EKAKTMTECYDYLFELAIKMKKLGIP---PEQFPVEE 234 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCC---hhhCcccc
Confidence 99999999999999999999999999 34455443
No 4
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=99.95 E-value=1.8e-27 Score=212.66 Aligned_cols=242 Identities=48% Similarity=0.759 Sum_probs=220.4
Q ss_pred CCCCeEEEecccCCCccccccchhhhhHHHHHHHhHHhhhcCChhhHHHHHHHHHHHHHHhhhccCCCCCCCCCCCChHH
Q 016771 138 GLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 217 (383)
Q Consensus 138 ~~~ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (383)
..+.|.++.|++||.++++|+++.||||+.+.+.+++..+|+.+..++.+..+++....+. ....+.+++++...+.+.
T Consensus 5 ~~~~k~~llDIegttt~isfVkd~LFpya~~nV~~~v~~~~~~~~~~~iv~~l~~~~~e~~-~~~~~~v~i~~~~~~~e~ 83 (254)
T KOG2630|consen 5 VRKWKELLLDIEGTTTSISFVKDVLFPYAKENVEELVQEPYETKIGQEIVSELRQRPEEQL-GSTNNIVPITDVTAAEEA 83 (254)
T ss_pred hhhhhhheEeEEeeecchHHHHHhhhHHHHHHHHHHhcCccccchHHHHHHHHhhhHHHHh-ccccCcccccccchhhhh
Confidence 3467899999999999999999999999999999999999999998999999998877776 556677778877777666
Q ss_pred HHHHHHHHHHHHHhhhhcchHHHHHhHHHHHHhhhccccccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcC
Q 016771 218 VIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 297 (383)
Q Consensus 218 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~ 297 (383)
.+. ..+++++++.+.+.+.++++++++|..+|+.+....+.|+++...++.++..|++++|.|+++...++.++.+.+
T Consensus 84 ~v~--v~~v~~~~~~d~k~t~~K~lQg~iw~~gy~sg~lk~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~ 161 (254)
T KOG2630|consen 84 DVH--VANVEKLISFDEKRTILKQLQGRIWAAGYESGELKAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSD 161 (254)
T ss_pred hhH--HHHHHHHHhhhcccchhHHHHHHHHHhhcccccccccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccC
Confidence 655 666788999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCC--Ce
Q 016771 298 YGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FK 375 (383)
Q Consensus 298 ~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~--d~ 375 (383)
-+++..++++|||...+.|-...+|..+.+.++.+ +.+++|..|-+....||+.+|+.+..+.|++|.+....++ .-
T Consensus 162 ~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s-~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~ 240 (254)
T KOG2630|consen 162 AGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKS-PREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYC 240 (254)
T ss_pred cchHHHHhhhhhhccccceehhHHHHHHHHHhCCC-hhheEEeccChHHHHHHHhcccceeeeecCCCCCCCccccccee
Confidence 88898999999999889999999999999999998 9999999999999999999999999999999998776665 56
Q ss_pred eeCCccCC
Q 016771 376 TINSFAEI 383 (383)
Q Consensus 376 vI~sl~eL 383 (383)
++.+|..|
T Consensus 241 ~i~~F~~l 248 (254)
T KOG2630|consen 241 VIWSFEIL 248 (254)
T ss_pred eeccchhh
Confidence 78887754
No 5
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.95 E-value=4e-27 Score=221.41 Aligned_cols=123 Identities=15% Similarity=0.142 Sum_probs=106.8
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
...++||+.++|+.|+++|++++|+||++...++..++++++.++|+ ++++ ++....||+|++|..++++++++ |+
T Consensus 106 ~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~--~~~~~~KP~p~~~~~a~~~~~~~-~~ 182 (248)
T PLN02770 106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIG--SECEHAKPHPDPYLKALEVLKVS-KD 182 (248)
T ss_pred cCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEec--CcCCCCCCChHHHHHHHHHhCCC-hh
Confidence 46899999999999999999999999999999999999997777776 3444 44566899999999999999998 99
Q ss_pred cEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCC-CCCeeeCCccC
Q 016771 336 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPEN-HGFKTINSFAE 382 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~-~~d~vI~sl~e 382 (383)
+|+||||+..|+++|+++||++|++.|+.....+.. .++++++++.|
T Consensus 183 ~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 183 HTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred HEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 999999999999999999999999999754333332 34899999886
No 6
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.95 E-value=8e-27 Score=215.55 Aligned_cols=125 Identities=26% Similarity=0.287 Sum_probs=110.5
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
...+|||+.++|..|+++|++++|+||++...++..++++++.++|+.+.+ .++....||+|..+..++++++++ |++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g-~~~~~~~KP~P~~l~~~~~~~~~~-~~~ 164 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG-GDDVPPPKPDPEPLLLLLEKLGLD-PEE 164 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc-CCCCCCCCcCHHHHHHHHHHhCCC-hhh
Confidence 468999999999999999999999999999999999999988888875555 355678999999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCCC-CCCCCCC-CCeeeCCccCC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPENH-GFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~~~-~d~vI~sl~eL 383 (383)
++||||+.+|+.+|++||+.+|+|.||.. ...+... +|++++++.||
T Consensus 165 ~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el 213 (220)
T COG0546 165 ALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAEL 213 (220)
T ss_pred eEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHH
Confidence 99999999999999999999999999953 3334444 49999998875
No 7
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.95 E-value=9.8e-27 Score=213.55 Aligned_cols=125 Identities=17% Similarity=0.159 Sum_probs=106.0
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
...++||+.++|+.|+++|++++|+||+....+...++.+++.++|+.+.+ .+.....||+|++|.+++++++++ |++
T Consensus 80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~-~~~~~~~Kp~p~~~~~~~~~~~~~-~~~ 157 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVIT-LDDVEHAKPDPEPVLKALELLGAK-PEE 157 (214)
T ss_pred hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEe-cCcCCCCCCCcHHHHHHHHHcCCC-HHH
Confidence 457999999999999999999999999999999999999977666654333 144556899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCC-CCCCCC-CCCCeeeCCccCC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLPE-NHGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~-~~~~~~-~~~d~vI~sl~eL 383 (383)
|+||||+++|+.+|+++|+++|++.|+. ....+. ..++++++++.||
T Consensus 158 ~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l 206 (214)
T PRK13288 158 ALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDL 206 (214)
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHH
Confidence 9999999999999999999999999983 333332 2348899998764
No 8
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=4.5e-26 Score=211.69 Aligned_cols=125 Identities=21% Similarity=0.244 Sum_probs=105.3
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
..+++||+.++|+.|+++|++++|+||++...++..++++++.++|+++.+ -+.....||+|++|..+++++|++ |++
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~-~~~~~~~KP~p~~~~~~~~~l~~~-p~~ 170 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIG-GDTLAERKPHPLPLLVAAERIGVA-PTD 170 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEe-cCcCCCCCCCHHHHHHHHHHhCCC-hhh
Confidence 357999999999999999999999999999999999999976666664433 033456899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCCC-CC-CCC-CCCCeeeCCccCC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPGN-GP-LPE-NHGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~-~~~-~~~d~vI~sl~eL 383 (383)
|+||||+.+|+.+|+++|+++|++.|+.. .. .+. ..++++++++.||
T Consensus 171 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el 220 (229)
T PRK13226 171 CVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLL 220 (229)
T ss_pred EEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence 99999999999999999999999999843 22 222 2359999998764
No 9
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.94 E-value=7e-26 Score=208.42 Aligned_cols=124 Identities=19% Similarity=0.190 Sum_probs=104.8
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccc-eeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~-v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
...++||+.++|+.|+++|++++|+||++...+...++++++.++|+. +++ ++....||+|++|+.+++++|++ |+
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~--~~~~~~KP~~~~~~~~~~~~~~~-~~ 168 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITS--EEEGVEKPHPKIFYAALKRLGVK-PE 168 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEe--ccCCCCCCCHHHHHHHHHHcCCC-hh
Confidence 357999999999999999999999999999999999999976666653 333 44556899999999999999998 99
Q ss_pred cEEEEecCH-HhHHHHHHcCCcEEEEeCCCCCC-C-C-CCCCCeeeCCccCC
Q 016771 336 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-L-P-ENHGFKTINSFAEI 383 (383)
Q Consensus 336 e~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~-~-~-~~~~d~vI~sl~eL 383 (383)
+|+|||||+ +|+.+|+++||++|++.++.... . . ...++++|+++.||
T Consensus 169 ~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 169 EAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred hEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 999999998 89999999999999999874322 1 1 12348899999875
No 10
>PRK11587 putative phosphatase; Provisional
Probab=99.94 E-value=2.4e-26 Score=211.83 Aligned_cols=123 Identities=19% Similarity=0.211 Sum_probs=101.9
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
...++||+.++|+.|+++|++++|+||++...+...++..++..+..++++ +.....||+|++|..+++++|++ |++
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~--~~~~~~KP~p~~~~~~~~~~g~~-p~~ 157 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTA--ERVKRGKPEPDAYLLGAQLLGLA-PQE 157 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEH--HHhcCCCCCcHHHHHHHHHcCCC-ccc
Confidence 468999999999999999999999999998888888887765322223443 44556899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccCC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~eL 383 (383)
|+|||||..|+++|+++||++|++.++..... ...++++++++.||
T Consensus 158 ~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~-~~~~~~~~~~~~el 203 (218)
T PRK11587 158 CVVVEDAPAGVLSGLAAGCHVIAVNAPADTPR-LDEVDLVLHSLEQL 203 (218)
T ss_pred EEEEecchhhhHHHHHCCCEEEEECCCCchhh-hccCCEEecchhhe
Confidence 99999999999999999999999988643322 22358999999875
No 11
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.94 E-value=1.9e-26 Score=217.07 Aligned_cols=124 Identities=18% Similarity=0.177 Sum_probs=105.6
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcc-cc-eeeeeccCCCCCCCHHHHHHHHHHcCC-CC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KY-LSGFFDTAVGNKRETPSYVEITNSLGV-DK 333 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~-~~-v~~~~d~~~~~KP~p~~~~~~~~~l~v-~~ 333 (383)
...++||+.++|+.|+++|++++|+||++...++.+++++++.+++ +. +++ +.....||+|++|..+++++|+ +
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~--~~~~~~KP~p~~~~~a~~~l~~~~- 173 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTT--DDVPAGRPAPWMALKNAIELGVYD- 173 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEcc--ccCCCCCCCHHHHHHHHHHcCCCC-
Confidence 4689999999999999999999999999999999999999777764 43 344 4556789999999999999998 5
Q ss_pred CCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCC------------------------CCCCCC-CCeeeCCccCC
Q 016771 334 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNG------------------------PLPENH-GFKTINSFAEI 383 (383)
Q Consensus 334 p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~------------------------~~~~~~-~d~vI~sl~eL 383 (383)
|++|+|||||+.|+.+|+++||.+|+|.+|... ..+... ++++++++.||
T Consensus 174 ~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el 248 (253)
T TIGR01422 174 VAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAEL 248 (253)
T ss_pred chheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHH
Confidence 899999999999999999999999999998431 122223 38999998875
No 12
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.94 E-value=6.4e-26 Score=214.48 Aligned_cols=123 Identities=10% Similarity=0.060 Sum_probs=104.4
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
...++||+.++|+.|+++|++++|+||++...++.+++++++.++|+ ++++ ++....||+|++|+.+++++|++ |+
T Consensus 107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~--~d~~~~KP~Pe~~~~a~~~l~~~-p~ 183 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAA--EDVYRGKPDPEMFMYAAERLGFI-PE 183 (260)
T ss_pred CcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEec--ccCCCCCCCHHHHHHHHHHhCCC-hH
Confidence 35789999999999999999999999999999999999997766666 3333 44556899999999999999998 99
Q ss_pred cEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccCC
Q 016771 336 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 383 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~eL 383 (383)
+|+|||||..|+++|+++||++|++........+ ..++++|+++.||
T Consensus 184 ~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l-~~ad~vi~~~~el 230 (260)
T PLN03243 184 RCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYEL-SAGDLVVRRLDDL 230 (260)
T ss_pred HeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhh-ccCCEEeCCHHHH
Confidence 9999999999999999999999999733333222 2358999998775
No 13
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.94 E-value=1.1e-25 Score=207.89 Aligned_cols=124 Identities=22% Similarity=0.257 Sum_probs=106.2
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccce-eeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v-~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
...++||+.++|+.|+++|++++|+||+....++..++.+++.++|+.+ ++ +.....||+|++|+.+++++|++ |+
T Consensus 90 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~--~~~~~~Kp~~~~~~~~~~~~~~~-~~ 166 (222)
T PRK10826 90 TRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASA--EKLPYSKPHPEVYLNCAAKLGVD-PL 166 (222)
T ss_pred CCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEc--ccCCCCCCCHHHHHHHHHHcCCC-HH
Confidence 4689999999999999999999999999999999999999777776633 33 44556899999999999999998 99
Q ss_pred cEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCC-CCCCeeeCCccCC
Q 016771 336 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPE-NHGFKTINSFAEI 383 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~-~~~d~vI~sl~eL 383 (383)
+|+||||+.+|+.+|+++||++|++.++....+.. ..++.+++|+.||
T Consensus 167 ~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 167 TCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred HeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHH
Confidence 99999999999999999999999999885443322 2348899998875
No 14
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.94 E-value=1.2e-25 Score=205.52 Aligned_cols=125 Identities=20% Similarity=0.210 Sum_probs=106.0
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
...++||+.++|+.|+++|++++|+||++...++.+++++++.++|+.+.+. ++....||+|++|..++++++++ |++
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~-~~~~~~Kp~p~~~~~~~~~~~~~-~~~ 160 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGG-DSLAQRKPHPDPLLLAAERLGVA-PQQ 160 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEec-CCCCCCCCChHHHHHHHHHcCCC-hhH
Confidence 4689999999999999999999999999999999999999776666644331 34456899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCCC-CCCCC-CCCCeeeCCccCC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPE-NHGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~-~~~d~vI~sl~eL 383 (383)
|+||||+.+|+.+|+++||++|++.|+.. ...+. ..++++++++.||
T Consensus 161 ~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l 209 (213)
T TIGR01449 161 MVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNEL 209 (213)
T ss_pred eEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHH
Confidence 99999999999999999999999998743 32332 2348999998764
No 15
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.94 E-value=8.1e-26 Score=214.69 Aligned_cols=107 Identities=17% Similarity=0.101 Sum_probs=93.4
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcc-cc-eeeeeccCCCCCCCHHHHHHHHHHcCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KY-LSGFFDTAVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~-~~-v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
...++||+.++|+.|+++|++++|+||++...+..+++.+++.+++ +. +++ ++....||+|++|..+++++|+.+|
T Consensus 99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~--~~~~~~KP~p~~~~~a~~~l~~~~~ 176 (267)
T PRK13478 99 YATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTT--DDVPAGRPYPWMALKNAIELGVYDV 176 (267)
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcC--CcCCCCCCChHHHHHHHHHcCCCCC
Confidence 4689999999999999999999999999999999999988665654 43 333 4455789999999999999999526
Q ss_pred CcEEEEecCHHhHHHHHHcCCcEEEEeCCCC
Q 016771 335 SEILFVTDVYQEATAAKAAGLEVVISIRPGN 365 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 365 (383)
++|+||||+++|+++|+++||++|+|.++..
T Consensus 177 ~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 177 AACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred cceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 9999999999999999999999999999854
No 16
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.93 E-value=3.8e-25 Score=203.64 Aligned_cols=126 Identities=14% Similarity=0.127 Sum_probs=103.9
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCC--CcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG--DLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~--~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
..+++||+.++|+.|+++|++++|+||++...+..+++++++. ++|+.+-+. ++....||+|++|..+++++++.+|
T Consensus 85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~-~~~~~~KP~p~~~~~a~~~~~~~~~ 163 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCP-SDVAAGRPAPDLILRAMELTGVQDV 163 (220)
T ss_pred CCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcC-CcCCCCCCCHHHHHHHHHHcCCCCh
Confidence 3589999999999999999999999999999999999999766 666533321 3445689999999999999999526
Q ss_pred CcEEEEecCHHhHHHHHHcCCcE-EEEeCCC-CCCCCCCC-CCeeeCCccCC
Q 016771 335 SEILFVTDVYQEATAAKAAGLEV-VISIRPG-NGPLPENH-GFKTINSFAEI 383 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG~~~-i~v~~~~-~~~~~~~~-~d~vI~sl~eL 383 (383)
++|+||||++.|+++|+++||.+ |++.++. +...+... ++++++++.+|
T Consensus 164 ~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l 215 (220)
T TIGR03351 164 QSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADL 215 (220)
T ss_pred hHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence 99999999999999999999999 8998874 33333233 38888988764
No 17
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.93 E-value=3.6e-25 Score=217.57 Aligned_cols=124 Identities=10% Similarity=0.046 Sum_probs=105.5
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
...++||+.++|+.|+++|++++|+||++...++.+++++++..+|+.+.+ .++....||+|++|..+++++|++ |++
T Consensus 214 ~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~-sddv~~~KP~Peifl~A~~~lgl~-Pee 291 (381)
T PLN02575 214 IYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVA-AEDVYRGKPDPEMFIYAAQLLNFI-PER 291 (381)
T ss_pred CCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEe-cCcCCCCCCCHHHHHHHHHHcCCC-ccc
Confidence 357999999999999999999999999999999999999977776664333 144556899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccCC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~eL 383 (383)
|+||||+..|+++|+++||++|+|.++...... ..++++|+++.||
T Consensus 292 cl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l-~~Ad~iI~s~~EL 337 (381)
T PLN02575 292 CIVFGNSNQTVEAAHDARMKCVAVASKHPIYEL-GAADLVVRRLDEL 337 (381)
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEECCCCChhHh-cCCCEEECCHHHH
Confidence 999999999999999999999999876433222 2358899998875
No 18
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.93 E-value=1.4e-24 Score=196.82 Aligned_cols=106 Identities=27% Similarity=0.343 Sum_probs=94.5
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
..++||+.++|+.|+++|++++|+||++...++..++++++.++|+ ++++ +.....||+|++|..+++++|++ |++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s--~~~~~~KP~~~~~~~~~~~~~~~-p~~ 167 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSA--DAVRAYKPAPQVYQLALEALGVP-PDE 167 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEeh--hhcCCCCCCHHHHHHHHHHhCCC-hhh
Confidence 4789999999999999999999999999999999999996655555 3333 44567899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCCCC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPGNG 366 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~ 366 (383)
|+||||+..|+.+|+++||++|++.+++..
T Consensus 168 ~~~vgD~~~Di~~A~~~G~~~i~v~r~~~~ 197 (198)
T TIGR01428 168 VLFVASNPWDLGGAKKFGFKTAWVNRPGEP 197 (198)
T ss_pred EEEEeCCHHHHHHHHHCCCcEEEecCCCCC
Confidence 999999999999999999999999987654
No 19
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=9e-25 Score=208.17 Aligned_cols=135 Identities=19% Similarity=0.236 Sum_probs=108.7
Q ss_pred HHHhhhccccccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHH
Q 016771 247 WRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEIT 326 (383)
Q Consensus 247 ~~~~y~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~ 326 (383)
|.+.|........++||+.++|+.|+++|++++|+||++...++..++++++..+|+.+.+ .+.....||+|++|+.++
T Consensus 89 ~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~-~d~~~~~Kp~p~~~~~~~ 167 (272)
T PRK13223 89 FMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIG-GDTLPQKKPDPAALLFVM 167 (272)
T ss_pred HHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEe-cCCCCCCCCCcHHHHHHH
Confidence 3334444333467999999999999999999999999999999999999866665653322 033456899999999999
Q ss_pred HHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCC-CCCC-CCCCeeeCCccCC
Q 016771 327 NSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPE-NHGFKTINSFAEI 383 (383)
Q Consensus 327 ~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~-~~~~-~~~d~vI~sl~eL 383 (383)
+++|++ |++|+||||+.+|+.+|+++||++++|.+|.+. ..+. ..++++++++.||
T Consensus 168 ~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el 225 (272)
T PRK13223 168 KMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRAL 225 (272)
T ss_pred HHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHH
Confidence 999998 999999999999999999999999999997433 2222 2458999998764
No 20
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.93 E-value=5.3e-25 Score=200.70 Aligned_cols=124 Identities=22% Similarity=0.193 Sum_probs=105.5
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccce-eeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v-~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
..+++||+.++|+.|+++|++++|+||++...++..++++++.++|+.+ +. +....+||+|++|..++++++++ |+
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~--~~~~~~KP~~~~~~~~~~~~~~~-~~ 149 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGS--DEVPRPKPAPDIVREALRLLDVP-PE 149 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEec--CcCCCCCCChHHHHHHHHHcCCC-hh
Confidence 4689999999999999999999999999999999999999766655533 32 33456899999999999999998 99
Q ss_pred cEEEEecCHHhHHHHHHcCCcEEEEeCC-CCCCCCCC-CCCeeeCCccCC
Q 016771 336 EILFVTDVYQEATAAKAAGLEVVISIRP-GNGPLPEN-HGFKTINSFAEI 383 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~aG~~~i~v~~~-~~~~~~~~-~~d~vI~sl~eL 383 (383)
+|+||||+..|+.+|+++||++|++.|+ ++...+.. .++++++++.+|
T Consensus 150 ~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l 199 (205)
T TIGR01454 150 DAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSL 199 (205)
T ss_pred heEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHH
Confidence 9999999999999999999999999998 44444332 348999988764
No 21
>PRK09449 dUMP phosphatase; Provisional
Probab=99.93 E-value=3.4e-24 Score=197.87 Aligned_cols=123 Identities=15% Similarity=0.126 Sum_probs=101.2
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccc-eeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~-v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
..++||+.++|+.|+ +|++++|+||++...++..++++++.++|+. +++ +.....||+|++|..+++++|+.++++
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~--~~~~~~KP~p~~~~~~~~~~~~~~~~~ 170 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVIS--EQVGVAKPDVAIFDYALEQMGNPDRSR 170 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEE--CccCCCCCCHHHHHHHHHHcCCCCccc
Confidence 579999999999999 5799999999999999999999976666653 333 445568999999999999999862589
Q ss_pred EEEEecCH-HhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccCC
Q 016771 337 ILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~eL 383 (383)
|+||||+. .|+.+|+++||++|++.+++........++++|+++.||
T Consensus 171 ~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el 218 (224)
T PRK09449 171 VLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSEL 218 (224)
T ss_pred EEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHH
Confidence 99999998 699999999999999986533222222358999998764
No 22
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=2.3e-24 Score=198.73 Aligned_cols=125 Identities=23% Similarity=0.275 Sum_probs=104.0
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
...++||+.++|+.|+++|++++|+||+....++.+++++++..+++.+.+ .+.....||+|++|+.++++++++ |++
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~-~~~~~~~kp~~~~~~~~~~~~~~~-~~~ 168 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIG-GDSLPNKKPDPAPLLLACEKLGLD-PEE 168 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEc-CCCCCCCCcChHHHHHHHHHcCCC-hhh
Confidence 468999999999999999999999999999999999999966555543222 033446899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCCC-CCCCC-CCCCeeeCCccCC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPE-NHGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~-~~~d~vI~sl~eL 383 (383)
|+||||+.+|+.+|+++|+.+|++.++.. ..... ..++++++++.+|
T Consensus 169 ~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l 217 (226)
T PRK13222 169 MLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAEL 217 (226)
T ss_pred eEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHH
Confidence 99999999999999999999999999843 22222 2348999998764
No 23
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.92 E-value=1.2e-23 Score=193.62 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=103.7
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHc-CCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL-GVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l-~v~~p~ 335 (383)
...++||+.++|+.|+++ ++++|+||++...+...++.+++..+|+.+.+ .+.....||+|++|..+++++ +++ |+
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~-~~~~~~~KP~~~~~~~~~~~~~~~~-~~ 171 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFV-SEDAGIQKPDKEIFNYALERMPKFS-KE 171 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEE-cCccCCCCCCHHHHHHHHHHhcCCC-ch
Confidence 357999999999999999 99999999999999999999976666653332 033556899999999999999 998 99
Q ss_pred cEEEEecCH-HhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccCC
Q 016771 336 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 383 (383)
Q Consensus 336 e~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~eL 383 (383)
+|+||||+. .|+.+|+++||++|++.++...+.....++++++++.||
T Consensus 172 ~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 172 EVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred heEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHH
Confidence 999999998 799999999999999998744332223348899998764
No 24
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.92 E-value=2.5e-24 Score=199.45 Aligned_cols=105 Identities=15% Similarity=0.175 Sum_probs=92.1
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
...++||+.++|+.|+++|++++|+||++...+...++++++..+|+ ++++ +.....||+|++|+.+++++|++ |+
T Consensus 91 ~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s--~~~~~~KP~p~~~~~~~~~~~~~-p~ 167 (224)
T PRK14988 91 RAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLST--HTFGYPKEDQRLWQAVAEHTGLK-AE 167 (224)
T ss_pred cCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEe--eeCCCCCCCHHHHHHHHHHcCCC-hH
Confidence 46899999999999999999999999999999999999996666665 3333 44556899999999999999998 99
Q ss_pred cEEEEecCHHhHHHHHHcCCcE-EEEeCCC
Q 016771 336 EILFVTDVYQEATAAKAAGLEV-VISIRPG 364 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~aG~~~-i~v~~~~ 364 (383)
+|+||||++.|+++|+++||++ ++|.++.
T Consensus 168 ~~l~igDs~~di~aA~~aG~~~~~~v~~~~ 197 (224)
T PRK14988 168 RTLFIDDSEPILDAAAQFGIRYCLGVTNPD 197 (224)
T ss_pred HEEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence 9999999999999999999985 6677763
No 25
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.92 E-value=1.9e-24 Score=199.86 Aligned_cols=108 Identities=27% Similarity=0.262 Sum_probs=96.9
Q ss_pred ccccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCC
Q 016771 255 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDK 333 (383)
Q Consensus 255 ~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~ 333 (383)
....+++||+.++|..|+++|++++++||+++......++.+++.++|+ ++++ ++....||+|++|+.+++++|++
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~--~dv~~~KP~Pd~yL~Aa~~Lgv~- 158 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTA--DDVARGKPAPDIYLLAAERLGVD- 158 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccH--HHHhcCCCCCHHHHHHHHHcCCC-
Confidence 4456899999999999999999999999999999999999997666665 4555 55667799999999999999998
Q ss_pred CCcEEEEecCHHhHHHHHHcCCcEEEEeCCCC
Q 016771 334 PSEILFVTDVYQEATAAKAAGLEVVISIRPGN 365 (383)
Q Consensus 334 p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 365 (383)
|++|+.|+||+++++||++|||.+|++..+.+
T Consensus 159 P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 159 PEECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred hHHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 99999999999999999999999999998533
No 26
>PLN02940 riboflavin kinase
Probab=99.92 E-value=8.1e-24 Score=210.61 Aligned_cols=124 Identities=19% Similarity=0.255 Sum_probs=104.2
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHh-hcCCCCcccce-eeeeccCCCCCCCHHHHHHHHHHcCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG-NSNYGDLRKYL-SGFFDTAVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~-~~~~~~l~~~v-~~~~d~~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
...++||+.++|+.|+++|++++|+||++...+...++ +.++.++|+.+ ++ ++....||+|++|..++++++++ |
T Consensus 91 ~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~--d~v~~~KP~p~~~~~a~~~lgv~-p 167 (382)
T PLN02940 91 NIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGG--DEVEKGKPSPDIFLEAAKRLNVE-P 167 (382)
T ss_pred cCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEeh--hhcCCCCCCHHHHHHHHHHcCCC-h
Confidence 46799999999999999999999999999999988887 67665666533 33 44567899999999999999998 9
Q ss_pred CcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccCC
Q 016771 335 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 383 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~eL 383 (383)
++|+||||+..|+++|+++||++|++.++.........++.+++++.||
T Consensus 168 ~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 168 SNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 9999999999999999999999999998743322222348899998875
No 27
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.91 E-value=3.8e-24 Score=197.21 Aligned_cols=120 Identities=18% Similarity=0.161 Sum_probs=96.3
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc--ceeeeeccCCCCCCCHHHHHHHHHHcCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK--YLSGFFDTAVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~--~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
...++||+.++|+.|+ ++++|+||++...++..++++++.++|+ ++++ +.....||+|++|..++++++++ |
T Consensus 86 ~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~--~~~~~~KP~p~~~~~a~~~~~~~-p 159 (221)
T PRK10563 86 ELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSG--YDIQRWKPDPALMFHAAEAMNVN-V 159 (221)
T ss_pred cCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeH--HhcCCCCCChHHHHHHHHHcCCC-H
Confidence 4689999999999993 8999999999999999999997666663 3344 34557899999999999999998 9
Q ss_pred CcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccC
Q 016771 335 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 382 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~e 382 (383)
++|+||||++.|+++|+++||++|++..++........++.+++++.|
T Consensus 160 ~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 207 (221)
T PRK10563 160 ENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQ 207 (221)
T ss_pred HHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHH
Confidence 999999999999999999999999997542222222222455666655
No 28
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=9.3e-24 Score=201.06 Aligned_cols=123 Identities=17% Similarity=0.151 Sum_probs=101.2
Q ss_pred cccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 256 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 256 ~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
...+++||+.++|+.|+++|++++|+||++...+..+++++++.++|+.+.+ ... .+++|+.|..++++++++ |+
T Consensus 139 ~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~--~~~--~~~k~~~~~~~l~~~~~~-p~ 213 (273)
T PRK13225 139 PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQA--GTP--ILSKRRALSQLVAREGWQ-PA 213 (273)
T ss_pred ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEe--cCC--CCCCHHHHHHHHHHhCcC-hh
Confidence 3468999999999999999999999999999999999999966555553322 111 235678999999999998 99
Q ss_pred cEEEEecCHHhHHHHHHcCCcEEEEeCCCCCC-CCC-CCCCeeeCCccCC
Q 016771 336 EILFVTDVYQEATAAKAAGLEVVISIRPGNGP-LPE-NHGFKTINSFAEI 383 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~-~~~-~~~d~vI~sl~eL 383 (383)
+|+||||+..|+.+|+++||.+|+|.++.+.. .+. ..++++++++.+|
T Consensus 214 ~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL 263 (273)
T PRK13225 214 AVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDL 263 (273)
T ss_pred HEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHH
Confidence 99999999999999999999999999984432 232 2358999998764
No 29
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.91 E-value=2e-23 Score=195.11 Aligned_cols=119 Identities=15% Similarity=0.096 Sum_probs=94.2
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
...++||+.++|+.|+++ ++++|+||++.. +++.++.++|+.+.+ -+.....||+|++|..+++++|++ |++
T Consensus 111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~-~~~~~~~KP~p~~~~~a~~~~~~~-~~~ 182 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLR-AGPHGRSKPFSDMYHLAAEKLNVP-IGE 182 (238)
T ss_pred cCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEe-cccCCcCCCcHHHHHHHHHHcCCC-hhH
Confidence 368999999999999975 999999998765 366755566653322 144556899999999999999998 999
Q ss_pred EEEEecCH-HhHHHHHHcCCcEEEEeCCCCC-CC--C-CCCCCeeeCCccCC
Q 016771 337 ILFVTDVY-QEATAAKAAGLEVVISIRPGNG-PL--P-ENHGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~-~~--~-~~~~d~vI~sl~eL 383 (383)
|+||||++ .|+.+|+++||++||+.+++.. .. . ...+++.|+++.||
T Consensus 183 ~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el 234 (238)
T PRK10748 183 ILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASL 234 (238)
T ss_pred EEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHH
Confidence 99999995 9999999999999999986322 11 1 12347899998775
No 30
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.91 E-value=1.7e-23 Score=200.82 Aligned_cols=123 Identities=20% Similarity=0.218 Sum_probs=102.0
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc---ceeeeeccCCCCCCCHHHHHHHHHHcCCCCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK---YLSGFFDTAVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~---~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
.+++||+.++|+.|+++|++++|+||++...+..+++++...+++. ++.+ ++....||+|++|..+++++|++ |
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~--~~~~~~KP~p~~~~~a~~~~~~~-p 219 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAG--DDVPKKKPDPDIYNLAAETLGVD-P 219 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEec--cccCCCCCCHHHHHHHHHHhCcC-h
Confidence 4799999999999999999999999999999998888763223333 3433 44556899999999999999998 9
Q ss_pred CcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccCC
Q 016771 335 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 383 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~eL 383 (383)
++|+||||+..|+++|+++||++|+|.++.........++++++++.++
T Consensus 220 ~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 220 SRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred HHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhc
Confidence 9999999999999999999999999998743322223458999999875
No 31
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.91 E-value=1.7e-23 Score=213.48 Aligned_cols=122 Identities=18% Similarity=0.138 Sum_probs=99.8
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
..++|||+.++|+.|+++|++++|+||++...++..++++++.++|+.+.+. ++. ..||+|++|..+++++ + |++
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~-d~v-~~~~kP~~~~~al~~l--~-~~~ 402 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSI-EQI-NSLNKSDLVKSILNKY--D-IKE 402 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEec-CCC-CCCCCcHHHHHHHHhc--C-cce
Confidence 4589999999999999999999999999999999999999766666533220 332 3578889999999886 4 789
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccCC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~eL 383 (383)
|+||||+++|+.+|+++||.+|++.++.........++++++++.||
T Consensus 403 ~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 403 AAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred EEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHH
Confidence 99999999999999999999999999744322223458999998764
No 32
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.90 E-value=1.7e-22 Score=183.63 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=85.3
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccc-eeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~-v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
...++||+.++|+.|+++|++++|+||++... ...++++++.++|+. +.+ +.....||+|++|..+++++|++ |+
T Consensus 103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~fd~i~~s--~~~~~~KP~~~~~~~~~~~~~~~-~~ 178 (203)
T TIGR02252 103 PWQVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEALGLLEYFDFVVTS--YEVGAEKPDPKIFQEALERAGIS-PE 178 (203)
T ss_pred cceeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHCCcHHhcceEEee--cccCCCCCCHHHHHHHHHHcCCC-hh
Confidence 34799999999999999999999999998764 678888866666653 333 34556899999999999999998 99
Q ss_pred cEEEEecCH-HhHHHHHHcCCcEEE
Q 016771 336 EILFVTDVY-QEATAAKAAGLEVVI 359 (383)
Q Consensus 336 e~l~VGDs~-~Di~aA~~aG~~~i~ 359 (383)
+|+||||+. .|+.+|+++||++||
T Consensus 179 ~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 179 EALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred HEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999998 899999999999985
No 33
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.90 E-value=4.8e-23 Score=184.10 Aligned_cols=99 Identities=19% Similarity=0.219 Sum_probs=85.6
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccc-eeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~-v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
..++||+.++|+.|+++|++++|+||+.. ....++++++.++|+. +++ ++....||+|++|..++++++++ |++
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~--~~~~~~kp~p~~~~~~~~~~~~~-~~~ 160 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDP--AEIKKGKPDPEIFLAAAEGLGVS-PSE 160 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEeh--hhcCCCCCChHHHHHHHHHcCCC-HHH
Confidence 47999999999999999999999999753 4568899976666653 333 44556899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEe
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISI 361 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~ 361 (383)
|+||||+++|+++|+++||++|+|.
T Consensus 161 ~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 161 CIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred eEEEecCHHHHHHHHHcCCEEEecC
Confidence 9999999999999999999999874
No 34
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.89 E-value=3.3e-22 Score=184.58 Aligned_cols=123 Identities=24% Similarity=0.213 Sum_probs=102.3
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
..+++|++.++|+.|+++ ++++|+||+....+...++++|+.++|+ ++.+ +..+..||+|++|..+++++|++ |+
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s--~~~g~~KP~~~~f~~~~~~~g~~-p~ 172 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFIS--EDVGVAKPDPEIFEYALEKLGVP-PE 172 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEe--cccccCCCCcHHHHHHHHHcCCC-cc
Confidence 358999999999999999 9999999999999999999997666665 3333 34557899999999999999998 99
Q ss_pred cEEEEecCH-HhHHHHHHcCCcEEEEeCCCCCC-CCCCCCCeeeCCccCC
Q 016771 336 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LPENHGFKTINSFAEI 383 (383)
Q Consensus 336 e~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~-~~~~~~d~vI~sl~eL 383 (383)
+|+||||+. +||.+|+++||++||+.+++... ......++.+.++.+|
T Consensus 173 ~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l 222 (229)
T COG1011 173 EALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL 222 (229)
T ss_pred eEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHH
Confidence 999999999 88899999999999999875432 1112347788887653
No 35
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.89 E-value=3.1e-22 Score=179.57 Aligned_cols=99 Identities=16% Similarity=0.246 Sum_probs=87.2
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccc-eeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~-v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
..++|+ .++|..|+++ ++++|+||++...+...++++++.++|+. +++ ++....||+|++|..++++++++ |++
T Consensus 87 ~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~--~~~~~~KP~p~~~~~~~~~~~~~-~~~ 161 (188)
T PRK10725 87 VEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAA--DDVQHHKPAPDTFLRCAQLMGVQ-PTQ 161 (188)
T ss_pred CCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEeh--hhccCCCCChHHHHHHHHHcCCC-HHH
Confidence 468885 6999999876 89999999999999999999977666663 333 44567899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEe
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISI 361 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~ 361 (383)
|+||||+..|+++|+++|+++|+|.
T Consensus 162 ~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 162 CVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred eEEEeccHhhHHHHHHCCCEEEeec
Confidence 9999999999999999999999985
No 36
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.89 E-value=5.7e-22 Score=173.72 Aligned_cols=102 Identities=28% Similarity=0.389 Sum_probs=91.8
Q ss_pred cccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccc-eeeeeccCCCCCCCHHHHHHHHHHcCCCCC
Q 016771 256 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 256 ~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~-v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
...+++||+.++|+.|+++|++++++||++...++..++++++.++++. ++. ++....||+|+.|..++++++++ |
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~--~~~~~~Kp~~~~~~~~~~~~~~~-p 150 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISS--DDVGSRKPDPDAYRRALEKLGIP-P 150 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEG--GGSSSSTTSHHHHHHHHHHHTSS-G
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccccccccc--chhhhhhhHHHHHHHHHHHcCCC-c
Confidence 3568999999999999999999999999999999999999977666663 333 44566899999999999999998 9
Q ss_pred CcEEEEecCHHhHHHHHHcCCcEEEE
Q 016771 335 SEILFVTDVYQEATAAKAAGLEVVIS 360 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG~~~i~v 360 (383)
++|+||||++.|+.+|+++||++|+|
T Consensus 151 ~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 151 EEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp GGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 99999999999999999999999986
No 37
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.89 E-value=1.6e-22 Score=180.70 Aligned_cols=100 Identities=23% Similarity=0.276 Sum_probs=86.6
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
...++||+.++|+.|+++|++++|+||+ ..++.+++++++.++++.+.+ .+.....||+|++|..++++++++ |++
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~-~~~~~~~kp~~~~~~~~~~~~~~~-~~~ 161 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVD-ADEVKEGKPHPETFLLAAELLGVS-PNE 161 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeee-hhhCCCCCCChHHHHHHHHHcCCC-HHH
Confidence 4689999999999999999999999998 567888999966666653332 033456899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEE
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVIS 360 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v 360 (383)
|+||||+..|+++|+++||++|+|
T Consensus 162 ~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 162 CVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred eEEEeCcHhhHHHHHHCCCeEeeC
Confidence 999999999999999999999875
No 38
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.88 E-value=9e-22 Score=217.28 Aligned_cols=122 Identities=19% Similarity=0.211 Sum_probs=104.6
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCC-Cccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG-DLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~-~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
.++||+.++|+.|+++|++++|+||+....++..++++++. .+|+ ++++ ++....||+|++|+.++++++++ |++
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~--~~~~~~KP~Pe~~~~a~~~lgv~-p~e 237 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSA--DAFENLKPAPDIFLAAAKILGVP-TSE 237 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEEC--cccccCCCCHHHHHHHHHHcCcC-ccc
Confidence 58999999999999999999999999999999999999764 4455 3333 44566899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCC-CCCeeeCCccCC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPEN-HGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~-~~d~vI~sl~eL 383 (383)
|+||||+..|+++|+++||++|++.++.....+.. .++++++++.++
T Consensus 238 ~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 238 CVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 99999999999999999999999999854443333 348999999875
No 39
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.88 E-value=4.9e-22 Score=178.13 Aligned_cols=98 Identities=23% Similarity=0.301 Sum_probs=84.7
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCC----CCCCHHHHHHHHHHcCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVG----NKRETPSYVEITNSLGV 331 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~----~KP~p~~~~~~~~~l~v 331 (383)
...++||+.++|+.|+ ++++|+||++...+...++++++.++|+ ++++ +.... .||+|++|..+++++|+
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~--~~~~~~~~~~KP~p~~~~~~~~~~~~ 156 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCF--DTANPDYLLPKPSPQAYEKALREAGV 156 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEe--ecccCccCCCCCCHHHHHHHHHHhCC
Confidence 3579999999999998 4799999999999999999997666665 3333 33333 59999999999999999
Q ss_pred CCCCcEEEEecCHHhHHHHHHcCCcEEEE
Q 016771 332 DKPSEILFVTDVYQEATAAKAAGLEVVIS 360 (383)
Q Consensus 332 ~~p~e~l~VGDs~~Di~aA~~aG~~~i~v 360 (383)
+ |++|+||||++.|+.+|+++||++|+|
T Consensus 157 ~-~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 157 D-PERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred C-ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 8 999999999999999999999999875
No 40
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.87 E-value=9.2e-22 Score=180.03 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=84.0
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHH--HHHHHhhcCCCCcccc-eeeeeccCCCCCCCHHHHHHHHHHcCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA--QRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDK 333 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~--~~~~l~~~~~~~l~~~-v~~~~d~~~~~KP~p~~~~~~~~~l~v~~ 333 (383)
...++||+.++|+.|+++|++++|+||+.... ....+...++..+|+. +.+ +.....||+|++|..+++++|++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s--~~~~~~KP~p~~~~~~~~~~g~~- 168 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVES--CLEGLRKPDPRIYQLMLERLGVA- 168 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEe--eecCCCCCCHHHHHHHHHHcCCC-
Confidence 45799999999999999999999999987543 2223334433344543 222 33455899999999999999998
Q ss_pred CCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 334 PSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 334 p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
|++|+||||+..|+.+|+++||++|++.++
T Consensus 169 ~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 169 PEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred HHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 999999999999999999999999999875
No 41
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.87 E-value=5.6e-21 Score=169.95 Aligned_cols=99 Identities=25% Similarity=0.319 Sum_probs=85.6
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccc-eeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~-v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
.+++||+.++|+.|+++|++++|+||++... ..++.++++..+|+. +.+ +.....||+|++|..++++++++ |++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~--~~~~~~KP~~~~~~~~~~~~~~~-~~~ 159 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFS--GDVGRGKPDPDIYLLALKKLGLK-PEE 159 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEc--CCCCCCCCCHHHHHHHHHHcCCC-cce
Confidence 5799999999999999999999999999888 666666755555553 333 34567899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEE
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVIS 360 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v 360 (383)
|+||||++.|+.+|+++||++|+|
T Consensus 160 ~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 160 CLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEEEcCCHHHHHHHHHcCCEEEeC
Confidence 999999999999999999999975
No 42
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.86 E-value=4.9e-21 Score=173.95 Aligned_cols=103 Identities=17% Similarity=0.204 Sum_probs=86.6
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhc-CCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS-NYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~-~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
.++||+.++|+.|+++|++++|+||++.......+... ++..+|+ ++++ +.....||+|++|+.+++++|++ |++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s--~~~~~~KP~p~~~~~~~~~~~~~-p~~ 160 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLS--QDLGMRKPEARIYQHVLQAEGFS-AAD 160 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEe--cccCCCCCCHHHHHHHHHHcCCC-hhH
Confidence 58999999999999999999999999988766555432 3334444 3333 44567899999999999999998 999
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPG 364 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 364 (383)
|+||||++.|+.+|+++||+++++.++.
T Consensus 161 ~l~vgD~~~di~aA~~aG~~~i~~~~~~ 188 (199)
T PRK09456 161 AVFFDDNADNIEAANALGITSILVTDKQ 188 (199)
T ss_pred eEEeCCCHHHHHHHHHcCCEEEEecCCc
Confidence 9999999999999999999999998753
No 43
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.86 E-value=4e-21 Score=174.05 Aligned_cols=119 Identities=16% Similarity=0.175 Sum_probs=91.5
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
..++||+.++|+.|+++ ++++++||++.......++.+++..++. +|+.++.. ...||+|++|..+++++| |++
T Consensus 73 ~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~-~~~~~kp~~~~~a~~~~~---~~~ 147 (197)
T PHA02597 73 LSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMC-GHDESKEKLFIKAKEKYG---DRV 147 (197)
T ss_pred ccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEe-ccCcccHHHHHHHHHHhC---CCc
Confidence 57999999999999987 5788999988777776777775544442 33332211 124788999999999998 588
Q ss_pred EEEEecCHHhHHHHHHc--CCcEEEEeCCCCCCCCCCCCCeeeCCccCC
Q 016771 337 ILFVTDVYQEATAAKAA--GLEVVISIRPGNGPLPENHGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~a--G~~~i~v~~~~~~~~~~~~~d~vI~sl~eL 383 (383)
|+||||+..|+.+|++| ||++|++.|+.... ....++.|+|+.||
T Consensus 148 ~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~~~--~~~~~~~~~~~~~~ 194 (197)
T PHA02597 148 VCFVDDLAHNLDAAHEALSQLPVIHMLRGERDH--IPKLAHRVKSWNDI 194 (197)
T ss_pred EEEeCCCHHHHHHHHHHHcCCcEEEecchhhcc--ccchhhhhccHHHH
Confidence 99999999999999999 99999999984321 12236889988774
No 44
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.86 E-value=2.2e-20 Score=169.41 Aligned_cols=92 Identities=13% Similarity=0.124 Sum_probs=80.2
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 338 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l 338 (383)
.+.+++.++|+.|+++|++++|+||++...++.+++++++..+|+.+.+ .++... ||+|+.|..++++++++ |++|+
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~-~~~~~~-KP~p~~~~~~~~~~~~~-~~~~i 182 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIW-MEDCPP-KPNPEPLILAAKALGVE-ACHAA 182 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEe-ecCCCC-CcCHHHHHHHHHHhCcC-cccEE
Confidence 5667779999999999999999999999999999999977776764433 133344 99999999999999998 99999
Q ss_pred EEecCHHhHHHHHHc
Q 016771 339 FVTDVYQEATAAKAA 353 (383)
Q Consensus 339 ~VGDs~~Di~aA~~a 353 (383)
||||+++|+.+|+++
T Consensus 183 ~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 183 MVGDTVDDIITGRKA 197 (197)
T ss_pred EEeCCHHHHHHHHhC
Confidence 999999999999975
No 45
>PLN02811 hydrolase
Probab=99.84 E-value=2.4e-20 Score=172.12 Aligned_cols=124 Identities=18% Similarity=0.243 Sum_probs=97.4
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHH-HhhcCCCCccc-ceeeeec--cCCCCCCCHHHHHHHHHHcC--
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI-FGNSNYGDLRK-YLSGFFD--TAVGNKRETPSYVEITNSLG-- 330 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~-l~~~~~~~l~~-~v~~~~d--~~~~~KP~p~~~~~~~~~l~-- 330 (383)
...++||+.++|+.|+++|++++|+||++....... ++..++.++|+ ++++ + +....||+|++|..++++++
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~--~~~~~~~~KP~p~~~~~a~~~~~~~ 153 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTG--DDPEVKQGKPAPDIFLAAARRFEDG 153 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEEC--ChhhccCCCCCcHHHHHHHHHhCCC
Confidence 457899999999999999999999999987655443 33333334554 3343 4 34567999999999999997
Q ss_pred -CCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccCC
Q 016771 331 -VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 383 (383)
Q Consensus 331 -v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~eL 383 (383)
++ |++|+||||+..|+++|+++||++|++.++.........++++++++.|+
T Consensus 154 ~~~-~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~ 206 (220)
T PLN02811 154 PVD-PGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDF 206 (220)
T ss_pred CCC-ccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhC
Confidence 98 99999999999999999999999999998743322223348899998775
No 46
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.83 E-value=4e-20 Score=165.64 Aligned_cols=123 Identities=19% Similarity=0.164 Sum_probs=93.4
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHhhcCCCCcccceeeee---ccCCCCCCCHH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF---DTAVGNKRETP 320 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~---------------~~~~~~l~~~~~~~l~~~v~~~~---d~~~~~KP~p~ 320 (383)
.++||+.++|+.|+++|++++|+||++. ......++++++ .+..++.+.. +.....||+|+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~f~~i~~~~~~~~~~~~~~KP~p~ 107 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG-RLDGIYYCPHHPEDGCDCRKPKPG 107 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC-ccceEEECCCCCCCCCcCCCCCHH
Confidence 5899999999999999999999999873 233445666633 1222332210 12346899999
Q ss_pred HHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCC-CCCCCC--CeeeCCccCC
Q 016771 321 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGP-LPENHG--FKTINSFAEI 383 (383)
Q Consensus 321 ~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~-~~~~~~--d~vI~sl~eL 383 (383)
+|..+++++|++ |++|+||||+..|+.+|+++||.+|++.++.... .....+ +++++++.||
T Consensus 108 ~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el 172 (181)
T PRK08942 108 MLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADL 172 (181)
T ss_pred HHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHH
Confidence 999999999998 9999999999999999999999999998873322 222233 7889988764
No 47
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.83 E-value=3.1e-20 Score=160.91 Aligned_cols=104 Identities=21% Similarity=0.187 Sum_probs=84.4
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHhhcCCCCcccceeeee--ccCCCCCCCHHH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPS 321 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~---------------~~~~~~l~~~~~~~l~~~v~~~~--d~~~~~KP~p~~ 321 (383)
.++||+.++|+.|+++|++++|+||++. ..+...++++++.....++...+ +.....||+|++
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 4899999999999999999999999874 45666778874431112222211 123357999999
Q ss_pred HHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 322 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 322 ~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
|+.++++++++ |++|+||||+..|+++|+++||++|++.+|
T Consensus 107 ~~~~~~~~~~~-~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 107 ILEALKRLGVD-ASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 99999999998 999999999999999999999999999875
No 48
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.81 E-value=7.8e-19 Score=161.46 Aligned_cols=117 Identities=19% Similarity=0.222 Sum_probs=89.3
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccc--------eeeeec-cCCCCCCCHHHHHHHHHH
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY--------LSGFFD-TAVGNKRETPSYVEITNS 328 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~--------v~~~~d-~~~~~KP~p~~~~~~~~~ 328 (383)
.+++||+.++|+.|+++|++++|+||+....++.+++.+++..++.. +.+... .....+|+|.+|..++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 163 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRK 163 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHH
Confidence 46999999999999999999999999999999999999965554421 111111 112356789999999999
Q ss_pred cCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCC
Q 016771 329 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 379 (383)
Q Consensus 329 l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~s 379 (383)
++++ |++|+||||+.+|+.+|+++|+.+++ . ++ +.+...++++|.+
T Consensus 164 ~~~~-~~~~i~iGDs~~Di~aa~~ag~~i~~-~--~~-~~~~~~a~~~i~~ 209 (219)
T TIGR00338 164 EGIS-PENTVAVGDGANDLSMIKAAGLGIAF-N--AK-PKLQQKADICINK 209 (219)
T ss_pred cCCC-HHHEEEEECCHHHHHHHHhCCCeEEe-C--CC-HHHHHhchhccCC
Confidence 9998 99999999999999999999998543 2 22 1222344666663
No 49
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.81 E-value=9.9e-19 Score=151.89 Aligned_cols=93 Identities=30% Similarity=0.432 Sum_probs=80.3
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
....+||+.++|+.|+++|++++|+||++...+...++++ +..++..+.+ .+... .||+|++|.+++++++++ | +
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~-~~~~~-~Kp~~~~~~~~~~~~~~~-~-~ 136 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILG-SDEFG-AKPEPEIFLAALESLGLP-P-E 136 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEe-cCCCC-CCcCHHHHHHHHHHcCCC-C-C
Confidence 3467899999999999999999999999999999999886 4556654333 13344 899999999999999998 8 9
Q ss_pred EEEEecCHHhHHHHHHcC
Q 016771 337 ILFVTDVYQEATAAKAAG 354 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG 354 (383)
|+||||+..|+.+|+++|
T Consensus 137 ~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 137 VLHVGDNLNDIEGARNAG 154 (154)
T ss_pred EEEEeCCHHHHHHHHHcc
Confidence 999999999999999998
No 50
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.80 E-value=2.5e-19 Score=159.00 Aligned_cols=87 Identities=21% Similarity=0.195 Sum_probs=75.6
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
...++||+.++|+ +++|+||++...+...++++++..+++ ++++ +.....||+|++|+.+++++|++ |+
T Consensus 88 ~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~--~~~~~~KP~p~~f~~~~~~~~~~-p~ 157 (175)
T TIGR01493 88 NLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSV--DTVRAYKPDPVVYELVFDTVGLP-PD 157 (175)
T ss_pred cCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccH--hhcCCCCCCHHHHHHHHHHHCCC-HH
Confidence 3579999999998 388999999999999999997666665 3444 44567899999999999999998 99
Q ss_pred cEEEEecCHHhHHHHHHc
Q 016771 336 EILFVTDVYQEATAAKAA 353 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~a 353 (383)
+|+||||+..|+.+|+++
T Consensus 158 ~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 158 RVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HeEeEecChhhHHHHhcC
Confidence 999999999999999874
No 51
>PLN02954 phosphoserine phosphatase
Probab=99.79 E-value=3.4e-18 Score=157.76 Aligned_cols=123 Identities=16% Similarity=0.212 Sum_probs=90.8
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCC--Cccc---------ceeeeecc--CCCCCCCHHHHHH
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG--DLRK---------YLSGFFDT--AVGNKRETPSYVE 324 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~--~l~~---------~v~~~~d~--~~~~KP~p~~~~~ 324 (383)
..++||+.++|+.|+++|++++|+||+....++.+++.+++. .++. ++.+.... ....+++|+.++.
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 468999999999999999999999999999999999999654 2221 01110000 1134678899999
Q ss_pred HHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCC-CCCCCCCCeeeCCccCC
Q 016771 325 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTINSFAEI 383 (383)
Q Consensus 325 ~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~-~~~~~~~d~vI~sl~eL 383 (383)
++++++. ++|+||||+.+|+.+|+++|+.+++..++... +.....++++|+++.||
T Consensus 163 ~~~~~~~---~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el 219 (224)
T PLN02954 163 IKKKHGY---KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL 219 (224)
T ss_pred HHHHcCC---CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence 9998875 48999999999999999999887654333322 22222348999998764
No 52
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.79 E-value=8.6e-19 Score=148.69 Aligned_cols=98 Identities=22% Similarity=0.267 Sum_probs=83.4
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCc--------HHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHc-
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGS--------RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL- 329 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~--------~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l- 329 (383)
.++||+.++|+.|+++|++++|+||++ ....+..++++++... ..+. .. ...||+|++|..+++++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~---~~-~~~KP~~~~~~~~~~~~~ 99 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-VLYA---CP-HCRKPKPGMFLEALKRFN 99 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-EEEE---CC-CCCCCChHHHHHHHHHcC
Confidence 478999999999999999999999999 7888889999854311 1111 11 45799999999999999
Q ss_pred CCCCCCcEEEEec-CHHhHHHHHHcCCcEEEEeC
Q 016771 330 GVDKPSEILFVTD-VYQEATAAKAAGLEVVISIR 362 (383)
Q Consensus 330 ~v~~p~e~l~VGD-s~~Di~aA~~aG~~~i~v~~ 362 (383)
+++ |++|+|||| +..|+.+|+++|+.+|++.+
T Consensus 100 ~~~-~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~ 132 (132)
T TIGR01662 100 EID-PEESVYVGDQDLTDLQAAKRAGLAFILVAP 132 (132)
T ss_pred CCC-hhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence 598 999999999 68999999999999999863
No 53
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.78 E-value=1.2e-18 Score=155.39 Aligned_cols=124 Identities=17% Similarity=0.134 Sum_probs=94.9
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHhhcCCCCcccceeee-e--------ccCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGF-F--------DTAV 313 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~---------------~~~~~~l~~~~~~~l~~~v~~~-~--------d~~~ 313 (383)
..++||+.++|+.|+++|++++|+||++. ......+++.++. +..++.+. . +...
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~i~~~~~~~~~~~~~~~~~~ 103 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD-LDGIYYCPHHPEGVEEFRQVCD 103 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC-ccEEEECCCCCcccccccCCCC
Confidence 47999999999999999999999999985 2333455555332 22222110 0 1233
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcE-EEEeCCCCCCCCC-CCCCeeeCCccCC
Q 016771 314 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPGNGPLPE-NHGFKTINSFAEI 383 (383)
Q Consensus 314 ~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~-i~v~~~~~~~~~~-~~~d~vI~sl~eL 383 (383)
.+||+|++|..++++++++ |++|+||||+..|+++|+++|+++ +++.++....... ..++++|+++.||
T Consensus 104 ~~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 104 CRKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CCCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 5799999999999999998 999999999999999999999998 7999884432222 2359999999876
No 54
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.77 E-value=9.2e-18 Score=154.46 Aligned_cols=105 Identities=17% Similarity=0.175 Sum_probs=87.6
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
...+.+++.++|+.||++|+.++++||.+.... ..+..+++..+|+ ++.+ ...+..||+|++|+.+++++++. |+
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~vv~S--~e~g~~KPDp~If~~al~~l~v~-Pe 186 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDFVVES--CEVGLEKPDPRIFQLALERLGVK-PE 186 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhhhhhh--hhhccCCCChHHHHHHHHHhCCC-hH
Confidence 347888999999999999999999999987766 6777775444444 2222 22456899999999999999999 99
Q ss_pred cEEEEecCH-HhHHHHHHcCCcEEEEeCCCC
Q 016771 336 EILFVTDVY-QEATAAKAAGLEVVISIRPGN 365 (383)
Q Consensus 336 e~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~ 365 (383)
+|++|||+. +|+++|+++||+++.|.+..+
T Consensus 187 e~vhIgD~l~nD~~gA~~~G~~ailv~~~~~ 217 (237)
T KOG3085|consen 187 ECVHIGDLLENDYEGARNLGWHAILVDNSIT 217 (237)
T ss_pred HeEEecCccccccHhHHHcCCEEEEEccccc
Confidence 999999999 999999999999999997643
No 55
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.77 E-value=1e-17 Score=153.55 Aligned_cols=126 Identities=20% Similarity=0.201 Sum_probs=99.2
Q ss_pred cccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcC-CCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCC
Q 016771 256 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN-YGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDK 333 (383)
Q Consensus 256 ~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~-~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~ 333 (383)
....++||+..+++.|+.+|++++++|+.++.....+++++. +-..|+ .+.+--......||+|++|+.+++++|..
T Consensus 89 ~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~- 167 (222)
T KOG2914|consen 89 MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVP- 167 (222)
T ss_pred cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCC-
Confidence 456899999999999999999999999999988888888774 223332 33320022456799999999999999998
Q ss_pred C-CcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccC
Q 016771 334 P-SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 382 (383)
Q Consensus 334 p-~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~e 382 (383)
| +.|++++|++.++++|++|||++|++....-.......++.+++++.+
T Consensus 168 ~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~ 217 (222)
T KOG2914|consen 168 PPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLED 217 (222)
T ss_pred CccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccc
Confidence 7 999999999999999999999999999853333333344677776654
No 56
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.77 E-value=8e-18 Score=152.12 Aligned_cols=101 Identities=15% Similarity=0.064 Sum_probs=81.1
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeee--ccCCCC----------CCCHHHHHHH
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGN----------KRETPSYVEI 325 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~--d~~~~~----------KP~p~~~~~~ 325 (383)
.+++||+.++|+.|+++|++++|+||+....++.+++++++..+ ++..+ +..... +++++.+..+
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~---~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV---YSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE---EEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 47999999999999999999999999999999999999954433 32211 111122 2334688899
Q ss_pred HHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeC
Q 016771 326 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 362 (383)
Q Consensus 326 ~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~ 362 (383)
+++++++ +++|+||||+.+|+.+|+++|+.++....
T Consensus 156 ~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~~~a~~~~ 191 (201)
T TIGR01491 156 KRELNPS-LTETVAVGDSKNDLPMFEVADISISLGDE 191 (201)
T ss_pred HHHhCCC-HHHEEEEcCCHhHHHHHHhcCCeEEECCC
Confidence 9999998 99999999999999999999997765443
No 57
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.77 E-value=5.4e-19 Score=156.85 Aligned_cols=106 Identities=15% Similarity=0.087 Sum_probs=89.2
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHhhcCCC---------Ccccc-eeeeeccCCCCCCCHHHHHHH
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSG-SRLAQRLIFGNSNYG---------DLRKY-LSGFFDTAVGNKRETPSYVEI 325 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~-~~~~~~~~l~~~~~~---------~l~~~-v~~~~d~~~~~KP~p~~~~~~ 325 (383)
...+|||+.++|+.|+++|++++|+||+ ....++..++.+++. ++|+. +++ +.....||.|.++..+
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~--~~~~~~kp~~~i~~~~ 120 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEI--YKPNKAKQLEMILQKV 120 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeec--cCCchHHHHHHHHHHh
Confidence 4579999999999999999999999998 888889999999765 55553 333 3334567778888888
Q ss_pred HHHc--CCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCC
Q 016771 326 TNSL--GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN 365 (383)
Q Consensus 326 ~~~l--~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 365 (383)
.+++ +++ |++|+||||++.|+.+|+++|+.++++.++..
T Consensus 121 ~~~~~~gl~-p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~ 161 (174)
T TIGR01685 121 NKVDPSVLK-PAQILFFDDRTDNVREVWGYGVTSCYCPSGMD 161 (174)
T ss_pred hhcccCCCC-HHHeEEEcChhHhHHHHHHhCCEEEEcCCCcc
Confidence 7777 898 99999999999999999999999999988743
No 58
>PRK06769 hypothetical protein; Validated
Probab=99.76 E-value=2.9e-18 Score=152.64 Aligned_cols=121 Identities=11% Similarity=0.093 Sum_probs=94.0
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHH--------HHHHHHhhcCCCCcccceeeee---ccCCCCCCCHHHHHHHHH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRL--------AQRLIFGNSNYGDLRKYLSGFF---DTAVGNKRETPSYVEITN 327 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~--------~~~~~l~~~~~~~l~~~v~~~~---d~~~~~KP~p~~~~~~~~ 327 (383)
.+|||+.++|+.|+++|++++|+||++.. .....++.+ ++..++.+.. +.....||+|++|+++++
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~ 104 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF---GFDDIYLCPHKHGDGCECRKPSTGMLLQAAE 104 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC---CcCEEEECcCCCCCCCCCCCCCHHHHHHHHH
Confidence 68999999999999999999999998742 123335555 4545443311 223468999999999999
Q ss_pred HcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCC-CC------CCCC-CCCCeeeCCccCC
Q 016771 328 SLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG-NG------PLPE-NHGFKTINSFAEI 383 (383)
Q Consensus 328 ~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~-~~------~~~~-~~~d~vI~sl~eL 383 (383)
+++++ |++|+||||+..|+.+|+++||++|++.|+. .. ..+. ..++++++++.||
T Consensus 105 ~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el 167 (173)
T PRK06769 105 KHGLD-LTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA 167 (173)
T ss_pred HcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence 99998 9999999999999999999999999999973 31 1222 2348888888764
No 59
>PRK06755 hypothetical protein; Validated
Probab=99.75 E-value=2.3e-18 Score=157.10 Aligned_cols=91 Identities=23% Similarity=0.295 Sum_probs=76.5
Q ss_pred CeEEeCCceeeeecCCCCccceEEEeeecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHH
Q 016771 7 KEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHY 86 (383)
Q Consensus 7 ~~~~~~~~e~~k~~~~~~~~~~~~ipv~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~ 86 (383)
++|++.++||+|+++ ..+..++.|||++|.++..++.+.....+. ++.+||||||||+||||+|+++|++++|++||
T Consensus 114 ~~i~~~~~e~~~~~g-~~~~~~~~IPiv~~~~~~~~~la~~~~~~~--~~~~avLl~~HGv~~~G~~l~eA~~~~E~lE~ 190 (209)
T PRK06755 114 GEVTFDKRSVERVFG-KEGITEMTIPIVEDEKKFADLLENNVPNFI--EGGGVVLVHNYGMIVWGKTPEEAKKWLEGIEY 190 (209)
T ss_pred CcccccchHHHHHhc-ccCCCceEEEEEeCCCchhHHHHHHHHhhc--cCCCEEEEcCCCeEEEcCCHHHHHHHHHHHHH
Confidence 458889999999995 345557889999999999766665444333 36789999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCC
Q 016771 87 LFDAAIKLHQLGLD 100 (383)
Q Consensus 87 l~~~~~~~~~~~~~ 100 (383)
+|++++++++++..
T Consensus 191 l~~~~~~~~~l~~~ 204 (209)
T PRK06755 191 LMNYHVKLLMIKGA 204 (209)
T ss_pred HHHHHHHHHHhccc
Confidence 99999999987644
No 60
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.74 E-value=4.7e-17 Score=151.36 Aligned_cols=97 Identities=11% Similarity=0.110 Sum_probs=77.3
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCC----cHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSG----SRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDK 333 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~----~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~ 333 (383)
..+++++.++|+.|+++|++++|+||. .....+.+++++++.++++.+.+ -+.....||+|. .+++++++
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~-~d~~~~~Kp~~~---~~l~~~~i-- 186 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFA-GDKPGQYQYTKT---QWIQDKNI-- 186 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEEC-CCCCCCCCCCHH---HHHHhCCC--
Confidence 467888999999999999999999998 66788888989977666553333 033344678775 34455443
Q ss_pred CCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 334 PSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 334 p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
|+||||+.+|+.+|++||+++|.|.|+
T Consensus 187 ---~i~vGDs~~DI~aAk~AGi~~I~V~~g 213 (237)
T TIGR01672 187 ---RIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred ---eEEEeCCHHHHHHHHHCCCCEEEEEec
Confidence 799999999999999999999999998
No 61
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.74 E-value=1.5e-17 Score=147.01 Aligned_cols=96 Identities=16% Similarity=0.270 Sum_probs=79.9
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHH------------HHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHH
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRL------------AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITN 327 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~------------~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~ 327 (383)
+|||+.++|+.|+++|++++|+||++.. .+..+++++++. ...++.+ +....+||+|++|..+++
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~-~~~ii~~--~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP-IQVLAAT--HAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC-EEEEEec--CCCCCCCCccHHHHHHHH
Confidence 7899999999999999999999998763 466788888652 2222322 333457999999999999
Q ss_pred HcC--CCCCCcEEEEecCH--------HhHHHHHHcCCcEEE
Q 016771 328 SLG--VDKPSEILFVTDVY--------QEATAAKAAGLEVVI 359 (383)
Q Consensus 328 ~l~--v~~p~e~l~VGDs~--------~Di~aA~~aG~~~i~ 359 (383)
+++ ++ |++|+||||+. .|+++|+++|+++++
T Consensus 120 ~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 120 QYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 999 98 99999999986 699999999999875
No 62
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.71 E-value=2.2e-16 Score=145.65 Aligned_cols=99 Identities=12% Similarity=0.053 Sum_probs=78.8
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccce--eeeec--cCCCCCCCHHH----------H
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFFD--TAVGNKRETPS----------Y 322 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v--~~~~d--~~~~~KP~p~~----------~ 322 (383)
..+++||+.++|+.|+++|++++|+||+....+..+++++ +.. ..++ ...++ .....||+|.. .
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~-~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K 149 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK-EQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK 149 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc-CcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence 3579999999999999999999999999999999999987 433 2232 11122 12346787764 3
Q ss_pred HHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 323 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 323 ~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
..++++++.. +++|+||||+.+|+.+|++||+.++
T Consensus 150 ~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 150 PSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCccee
Confidence 5788999998 9999999999999999999999433
No 63
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.71 E-value=2e-16 Score=141.26 Aligned_cols=189 Identities=16% Similarity=0.170 Sum_probs=128.1
Q ss_pred CCCeEEEecccCCCccccccchhhhhHHHHHHHhHHhhhcCChhh--HHHHHHHHHHHHHHhhhccCCCCCCCCCCCChH
Q 016771 139 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAET--QDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 216 (383)
Q Consensus 139 ~~ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~~~~l~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (383)
...++++||+|+||++.+. .+-....+.+.+|+...++.++- ......+-+. +...++|... -....+.+
T Consensus 13 ~~~~~l~FDiDdtLYp~St---~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~----YG~t~aGL~~-~~~~~d~d 84 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLST---GIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKE----YGLTMAGLKA-VGYIFDAD 84 (244)
T ss_pred ccceEEEEecccccccCch---hHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHH----HhHHHHHHHH-hcccCCHH
Confidence 3679999999999999753 24445667777888777653321 1122112211 1111111110 11111121
Q ss_pred HHHHHHHHHHHHHHhhhhcchHHHHHhHHHHHHhhhccccccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhc
Q 016771 217 EVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 296 (383)
Q Consensus 217 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~ 296 (383)
++.+++.. .+ .| ....|-+-.+.+|-.|+.++ .++.||+.+..+.+.++.+
T Consensus 85 ----eY~~~V~~----------------~L---Pl----q~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~L 135 (244)
T KOG3109|consen 85 ----EYHRFVHG----------------RL---PL----QDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKL 135 (244)
T ss_pred ----HHHHHhhc----------------cC---cH----hhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHh
Confidence 12221110 00 01 11468888999999999874 8999999999999999999
Q ss_pred CCCCcccceee--eec---cCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCC
Q 016771 297 NYGDLRKYLSG--FFD---TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 364 (383)
Q Consensus 297 ~~~~l~~~v~~--~~d---~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 364 (383)
|+.++|+.+.. +.. ....+||.++.|..+++..|+++|.+++|++||.+.|++|++.||+++++.+..
T Consensus 136 GieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 136 GIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREH 208 (244)
T ss_pred ChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeee
Confidence 98888874333 112 134589999999999999999889999999999999999999999999998764
No 64
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.69 E-value=2.2e-16 Score=153.44 Aligned_cols=117 Identities=18% Similarity=0.196 Sum_probs=89.6
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc----c----eeeee-ccCCCCCCCHHHHHHHHHH
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK----Y----LSGFF-DTAVGNKRETPSYVEITNS 328 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~----~----v~~~~-d~~~~~KP~p~~~~~~~~~ 328 (383)
.+++||+.++|+.|+++|++++|+|++.....+.+++++++...+. + +++.+ ......||+++.++.++++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~ 259 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQE 259 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHH
Confidence 5799999999999999999999999999888888888885433221 1 11211 1122468999999999999
Q ss_pred cCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCC
Q 016771 329 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 379 (383)
Q Consensus 329 l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~s 379 (383)
+|++ +++|++|||+.+|+.+++.||+.+++ +. .+.....+++++++
T Consensus 260 lgi~-~~qtIaVGDg~NDl~m~~~AGlgiA~--nA--kp~Vk~~Ad~~i~~ 305 (322)
T PRK11133 260 YEIP-LAQTVAIGDGANDLPMIKAAGLGIAY--HA--KPKVNEQAQVTIRH 305 (322)
T ss_pred cCCC-hhhEEEEECCHHHHHHHHHCCCeEEe--CC--CHHHHhhCCEEecC
Confidence 9998 99999999999999999999998775 21 22233344666653
No 65
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.67 E-value=2.7e-16 Score=138.34 Aligned_cols=104 Identities=14% Similarity=0.067 Sum_probs=87.2
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCc---------------HHHHHHHHhhcCCCCcccc-eeeee--ccCCCCCCCH
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGS---------------RLAQRLIFGNSNYGDLRKY-LSGFF--DTAVGNKRET 319 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~---------------~~~~~~~l~~~~~~~l~~~-v~~~~--d~~~~~KP~p 319 (383)
..+|||+.++|+.|+++|++++|+||++ ......+++.+++. +..+ ++..+ +.....||+|
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~-fd~ii~~~~~~~~~~~~~KP~~ 106 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII-FDDVLICPHFPDDNCDCRKPKI 106 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc-eeEEEECCCCCCCCCCCCCCCH
Confidence 3699999999999999999999999973 45677788888664 3233 22100 3345689999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 320 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 320 ~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
++|..++++++++ |++|+||||+..|+.+|+++||+++++.++
T Consensus 107 ~~~~~~~~~~~~~-~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 107 KLLEPYLKKNLID-KARSYVIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred HHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence 9999999999998 999999999999999999999999999986
No 66
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.67 E-value=1.7e-16 Score=151.79 Aligned_cols=122 Identities=15% Similarity=0.162 Sum_probs=89.7
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHH-HHHhhcCCCCcccceeeee--ccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR-LIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~-~~l~~~~~~~l~~~v~~~~--d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
.|+++.++|+.|+++|. ++|+||.+..... ..+...+.+.++..+.... +.....||+|.+|..++++++++ |++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~-~~~ 221 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSID-PAR 221 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCC-hhh
Confidence 58899999999999887 8999998764321 1122222223333222100 22335799999999999999998 999
Q ss_pred EEEEecCH-HhHHHHHHcCCcEEEEeCC-CCCCCCC---------CCCCeeeCCccCC
Q 016771 337 ILFVTDVY-QEATAAKAAGLEVVISIRP-GNGPLPE---------NHGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~-~Di~aA~~aG~~~i~v~~~-~~~~~~~---------~~~d~vI~sl~eL 383 (383)
|+||||++ .||.+|+++||++++|.|| .+...+. ..+|++++++.||
T Consensus 222 ~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 222 TLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred EEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999996 9999999999999999998 3332221 2359999999886
No 67
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=99.66 E-value=4.1e-16 Score=142.79 Aligned_cols=93 Identities=37% Similarity=0.508 Sum_probs=82.2
Q ss_pred CeEEeCCceeeeecCCCCccceEEEeeecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHH
Q 016771 7 KEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHY 86 (383)
Q Consensus 7 ~~~~~~~~e~~k~~~~~~~~~~~~ipv~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~ 86 (383)
..|.+.++||+|+++.+.......|||++|.++.++||+.+.++|. ++.+|+||+|||+++||+|+++|++++|++||
T Consensus 114 ~~~~~~~~e~~~~~~~~~~~~~~~vpv~~~~~~~~eLa~~v~~~l~--~~~~avLl~nHG~v~~G~~l~~A~~~~E~lE~ 191 (208)
T PRK06754 114 GAVTFQGQEIIKALGIWEENAEIHIPIIENHADIPTLAEEFAKHIQ--GDSGAVLIRNHGITVWGRDAFEAKKHLEAYEF 191 (208)
T ss_pred CeeeecChhhhhccCccccCceEEEEEecCCCCHHHHHHHHHHHhc--cCCcEEEECCCceEEEeCCHHHHHHHHHHHHH
Confidence 4678889999999965544445679999999999999999999996 35689999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCC
Q 016771 87 LFDAAIKLHQLGLDW 101 (383)
Q Consensus 87 l~~~~~~~~~~~~~~ 101 (383)
+|++++++++++.++
T Consensus 192 ~a~~~~~~~~~~~~~ 206 (208)
T PRK06754 192 LFSYHIKLLSIQGGV 206 (208)
T ss_pred HHHHHHHHHhhcCcc
Confidence 999999999987764
No 68
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.65 E-value=1.3e-15 Score=138.55 Aligned_cols=121 Identities=13% Similarity=0.057 Sum_probs=84.6
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeecc--CCCCCCCHHHHHHHHHHcCCCCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDT--AVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~--~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
.+++||+.++|..|+++ ++++|+||+....++..++++++..++. .+....+. ....++.|.....++++++.. +
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~-~ 144 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSL-G 144 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHh-C
Confidence 47899999999999999 9999999999999999999996554443 11110011 111234445556777788877 8
Q ss_pred CcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCC-eeeCCccCC
Q 016771 335 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGF-KTINSFAEI 383 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d-~vI~sl~eL 383 (383)
++|+||||+.+|+.+|+++|+.+. +.++ .......++ ++++++.||
T Consensus 145 ~~~v~iGDs~~D~~~~~aa~~~v~-~~~~--~~~~~~~~~~~~~~~~~el 191 (205)
T PRK13582 145 YRVIAAGDSYNDTTMLGEADAGIL-FRPP--ANVIAEFPQFPAVHTYDEL 191 (205)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEE-ECCC--HHHHHhCCcccccCCHHHH
Confidence 999999999999999999998543 3322 111112233 378887664
No 69
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=99.65 E-value=7.5e-16 Score=139.49 Aligned_cols=90 Identities=38% Similarity=0.758 Sum_probs=82.3
Q ss_pred eEEeCCceeeeecCC-CCccceEEEeeecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHH
Q 016771 8 EFRITHMEMIKGIKG-HGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHY 86 (383)
Q Consensus 8 ~~~~~~~e~~k~~~~-~~~~~~~~ipv~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~ 86 (383)
.+.+.++||+|+++| +.+.+.+.|||++|.+..++||+.+.++++++|+.+|+|++|||+++||+|+++|+.++|++|+
T Consensus 103 ~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~~~gs~ela~~~~~~l~~~~~~~avll~nHGv~~~G~~~~~A~~~~e~lE~ 182 (193)
T TIGR03328 103 AFELEGYEMLKALPGITTHEDKLTIPIFENTQDIARLADSVAPYLEAYPDVPGVLIRGHGLYAWGRDWEEAKRHLEALEF 182 (193)
T ss_pred eeeccchhhhhhhCCCcCCCCceEEeeecCCCChHHHHHHHHHHHhcCCCCCEEEEcCCcceEEcCCHHHHHHHHHHHHH
Confidence 488999999999876 4555678899999999999999999999987788999999999999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 016771 87 LFDAAIKLHQL 97 (383)
Q Consensus 87 l~~~~~~~~~~ 97 (383)
++++++.++++
T Consensus 183 ~a~~~~~~~~~ 193 (193)
T TIGR03328 183 LFECELEMLKL 193 (193)
T ss_pred HHHHHHHHhcC
Confidence 99999988764
No 70
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.64 E-value=3.2e-16 Score=148.21 Aligned_cols=123 Identities=15% Similarity=0.099 Sum_probs=93.3
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeec--cCCCCCCCHHHHHHHHHHcCCCCCCcE
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD--TAVGNKRETPSYVEITNSLGVDKPSEI 337 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d--~~~~~KP~p~~~~~~~~~l~v~~p~e~ 337 (383)
.|+++.+.++.|++.+++++|+||.+.......+...+.+.++..+..-.+ .....||+|.+|..++++++++ |++|
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-~~~~ 199 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCE-PEEA 199 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCC-hhhE
Confidence 467889999999999999999999987765555555555455543222001 1123699999999999999998 9999
Q ss_pred EEEecCH-HhHHHHHHcCCcEEEEeCCC-CCC--CC-CCCCCeeeCCccCC
Q 016771 338 LFVTDVY-QEATAAKAAGLEVVISIRPG-NGP--LP-ENHGFKTINSFAEI 383 (383)
Q Consensus 338 l~VGDs~-~Di~aA~~aG~~~i~v~~~~-~~~--~~-~~~~d~vI~sl~eL 383 (383)
+||||+. .|+.+|+++||++++|.+|. ... +. ...++++++++.||
T Consensus 200 ~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el 250 (257)
T TIGR01458 200 VMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA 250 (257)
T ss_pred EEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence 9999997 99999999999999999873 222 11 22348999998764
No 71
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.62 E-value=6.4e-15 Score=131.56 Aligned_cols=95 Identities=13% Similarity=0.122 Sum_probs=73.6
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceee--eec----------------cCCCCCCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSG--FFD----------------TAVGNKRE 318 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~--~~d----------------~~~~~KP~ 318 (383)
.+++||+.++|+.|+++|++++|+||+....++..++++++.++|+ +++. .++ +.....++
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 5799999999999999999999999999999999999996655554 2321 000 11122345
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCc
Q 016771 319 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLE 356 (383)
Q Consensus 319 p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~ 356 (383)
++++..+.++. +++|+||||+.+|+.+|+++++-
T Consensus 151 ~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 151 GKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred HHHHHHHHhhc----CceEEEECCCcchhchHhcCCcc
Confidence 77888877654 67999999999999999999764
No 72
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.61 E-value=5.7e-15 Score=123.40 Aligned_cols=99 Identities=27% Similarity=0.319 Sum_probs=83.9
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCCC----------------CCCHHH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGN----------------KRETPS 321 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~~----------------KP~p~~ 321 (383)
.++|++.++|+.|+++|++++|+||+....++..++.+++...+. ++.. +..... ||++..
T Consensus 24 ~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (139)
T cd01427 24 ELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITS--NGAAIYYPKEGLFLGGGPFDIGKPNPDK 101 (139)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheecc--chhhhhcccccccccccccccCCCCHHH
Confidence 588999999999999999999999999999999999985543443 2322 111112 999999
Q ss_pred HHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEE
Q 016771 322 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 360 (383)
Q Consensus 322 ~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v 360 (383)
+..++++++.. ++++++|||+.+|+.+|+++|++++++
T Consensus 102 ~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 102 LLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 99999999998 999999999999999999999999875
No 73
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.61 E-value=2.5e-14 Score=130.10 Aligned_cols=89 Identities=26% Similarity=0.329 Sum_probs=79.3
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc--ceeeeeccCCCCCCCHHHHHHHHHHcCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK--YLSGFFDTAVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~--~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
..+++|++.++|+.|+++|++++++|+.+...+..+.+.+ ++++ ++...+ .||+|.+|..++++++++ +
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l---gi~~~~v~a~~~-----~kP~~k~~~~~i~~l~~~-~ 195 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL---GIFDSIVFARVI-----GKPEPKIFLRIIKELQVK-P 195 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT---TSCSEEEEESHE-----TTTHHHHHHHHHHHHTCT-G
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccccccccccccc---cccccccccccc-----ccccchhHHHHHHHHhcC-C
Confidence 3489999999999999999999999999999999999999 5554 333311 599999999999999998 9
Q ss_pred CcEEEEecCHHhHHHHHHcC
Q 016771 335 SEILFVTDVYQEATAAKAAG 354 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG 354 (383)
++|+||||+.+|+.++++||
T Consensus 196 ~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 196 GEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp GGEEEEESSGGHHHHHHHSS
T ss_pred CEEEEEccCHHHHHHHHhCc
Confidence 99999999999999999997
No 74
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.60 E-value=1.1e-14 Score=135.30 Aligned_cols=98 Identities=11% Similarity=0.133 Sum_probs=75.1
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHhhcCC--CCcccceeeeeccCCCCCCCHHHHHHHHHHcC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGS----RLAQRLIFGNSNY--GDLRKYLSGFFDTAVGNKRETPSYVEITNSLG 330 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~----~~~~~~~l~~~~~--~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~ 330 (383)
.+.|+||+.++|+.|+++|++++++||.+ ....+.+++.+++ .++++.+.+ .+ ...||++.. ++++++
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~--gd-~~~K~~K~~---~l~~~~ 185 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFA--GD-KPGQYTKTQ---WLKKKN 185 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEc--CC-CCCCCCHHH---HHHhcC
Confidence 35799999999999999999999999953 5567777777865 444443222 11 236787754 444444
Q ss_pred CCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCC
Q 016771 331 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN 365 (383)
Q Consensus 331 v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 365 (383)
-++||||+..|+.+|++||+++|.|.|+.+
T Consensus 186 -----i~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 186 -----IRIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred -----CeEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 489999999999999999999999999833
No 75
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.59 E-value=6.1e-15 Score=130.89 Aligned_cols=97 Identities=11% Similarity=0.165 Sum_probs=83.5
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcE
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGS-RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 337 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~-~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~ 337 (383)
.++||+.++|+.|+++|++++|+||++ ...++.+++.+ ++..+ ....||+|++|..++++++++ |++|
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~---gl~~~-------~~~~KP~p~~~~~~l~~~~~~-~~~~ 111 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL---GIPVL-------PHAVKPPGCAFRRAHPEMGLT-SEQV 111 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc---CCEEE-------cCCCCCChHHHHHHHHHcCCC-HHHE
Confidence 689999999999999999999999998 56667777776 33211 123699999999999999998 9999
Q ss_pred EEEecCH-HhHHHHHHcCCcEEEEeCCCCC
Q 016771 338 LFVTDVY-QEATAAKAAGLEVVISIRPGNG 366 (383)
Q Consensus 338 l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~ 366 (383)
+||||+. .|+.+|+++||++|++.++...
T Consensus 112 l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~ 141 (170)
T TIGR01668 112 AVVGDRLFTDVMGGNRNGSYTILVEPLVHP 141 (170)
T ss_pred EEECCcchHHHHHHHHcCCeEEEEccCcCC
Confidence 9999998 7999999999999999998433
No 76
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.57 E-value=4e-14 Score=130.12 Aligned_cols=95 Identities=14% Similarity=0.093 Sum_probs=75.8
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccccee--eeec--cCCCCCCCHHHH----------H
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFD--TAVGNKRETPSY----------V 323 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~--~~~d--~~~~~KP~p~~~----------~ 323 (383)
.+++||+.++|+.|+++|++++|+|++....++.+++.++.. ..+++ ..++ .....||+|..+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~--~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK--DRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc--ccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 579999999999999999999999999999999999887211 12221 1122 123467887776 4
Q ss_pred HHHHHcCCCCCCcEEEEecCHHhHHHHHHcCC
Q 016771 324 EITNSLGVDKPSEILFVTDVYQEATAAKAAGL 355 (383)
Q Consensus 324 ~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~ 355 (383)
.++++++.. +++|+||||+.+|+.+|++||+
T Consensus 147 ~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 147 SLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCe
Confidence 778888887 9999999999999999999998
No 77
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=99.57 E-value=1.2e-14 Score=132.76 Aligned_cols=92 Identities=27% Similarity=0.497 Sum_probs=82.3
Q ss_pred CeEEeCCceeeeecCCCCcc-ceEEEeeecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHH
Q 016771 7 KEFRITHMEMIKGIKGHGYY-DELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYH 85 (383)
Q Consensus 7 ~~~~~~~~e~~k~~~~~~~~-~~~~ipv~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e 85 (383)
..+.+.++|++|+++|.+.+ ..+.||++++.++.++||+.+.++|.++|..+|+||+|||+++||+|+++|++++|++|
T Consensus 110 ~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~~~~~~eLa~~v~~~l~~~~~~~avlL~nHGvi~~G~~~~eA~~~~e~lE 189 (204)
T PRK09220 110 DALVLEGYELQKAFAGQTTHETAVVVPIFDNDQDIARLAARVAPYLDAQPLRYGYLIRGHGLYCWGRDMAEARRHLEGLE 189 (204)
T ss_pred CeeeecChhHHHHhCCCcccCCeeEEeeecCCCCHHHHHHHHHHHHHhCCCCcEEEECCCceEEEcCCHHHHHHHHHHHH
Confidence 34778899999999876544 45679999998899999999999999777678999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC
Q 016771 86 YLFDAAIKLHQLG 98 (383)
Q Consensus 86 ~l~~~~~~~~~~~ 98 (383)
+++++++++++++
T Consensus 190 ~~~~~~~~~~~~~ 202 (204)
T PRK09220 190 FLFECELERRLLE 202 (204)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999886
No 78
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.56 E-value=2.2e-14 Score=123.51 Aligned_cols=90 Identities=13% Similarity=0.211 Sum_probs=79.0
Q ss_pred CCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 016771 262 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 341 (383)
Q Consensus 262 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VG 341 (383)
|.+++.+..++++|.++.|+||++...+....+++++. ++.. ..||.+..|.+++++++++ +++|+|||
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~------A~KP~~~~fr~Al~~m~l~-~~~vvmVG 117 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIYR------AKKPFGRAFRRALKEMNLP-PEEVVMVG 117 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeec------ccCccHHHHHHHHHHcCCC-hhHEEEEc
Confidence 45566788889999999999999999999999999432 2222 4799999999999999998 99999999
Q ss_pred cCH-HhHHHHHHcCCcEEEEeC
Q 016771 342 DVY-QEATAAKAAGLEVVISIR 362 (383)
Q Consensus 342 Ds~-~Di~aA~~aG~~~i~v~~ 362 (383)
|.. .|+.+++.+||+||.|..
T Consensus 118 DqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 118 DQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred chhhhhhhcccccCcEEEEEEE
Confidence 999 999999999999999974
No 79
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.55 E-value=7.8e-15 Score=128.14 Aligned_cols=100 Identities=12% Similarity=0.109 Sum_probs=81.1
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHh
Q 016771 267 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 346 (383)
Q Consensus 267 ~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~D 346 (383)
+|++|+++|++++|+||++...+...++++ ++..++.+ .||+|+.+..++++++++ +++|+||||+.+|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~---gi~~~~~~-------~~~k~~~~~~~~~~~~~~-~~~~~~vGDs~~D 104 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL---GITHLYQG-------QSNKLIAFSDILEKLALA-PENVAYIGDDLID 104 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHc---CCCEEEec-------ccchHHHHHHHHHHcCCC-HHHEEEECCCHHH
Confidence 899999999999999999999999999999 44444443 478899999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCc
Q 016771 347 ATAAKAAGLEVVISIRPGNGPLPENHGFKTINSF 380 (383)
Q Consensus 347 i~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl 380 (383)
+.+++++|+. +++.+... .....+++++.+.
T Consensus 105 ~~~~~~ag~~-~~v~~~~~--~~~~~a~~i~~~~ 135 (154)
T TIGR01670 105 WPVMEKVGLS-VAVADAHP--LLIPRADYVTRIA 135 (154)
T ss_pred HHHHHHCCCe-EecCCcCH--HHHHhCCEEecCC
Confidence 9999999997 66665432 1222336666543
No 80
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.52 E-value=2.9e-14 Score=126.26 Aligned_cols=83 Identities=20% Similarity=0.311 Sum_probs=72.8
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHh
Q 016771 267 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 346 (383)
Q Consensus 267 ~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~D 346 (383)
.++.|+++|++++|+||++...++..++++++ ..++.. .||+|+.|..++++++++ +++|+||||+.+|
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi---~~~f~~-------~kpkp~~~~~~~~~l~~~-~~ev~~iGD~~nD 110 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEELKI---KRFHEG-------IKKKTEPYAQMLEEMNIS-DAEVCYVGDDLVD 110 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCC---cEEEec-------CCCCHHHHHHHHHHcCcC-HHHEEEECCCHHH
Confidence 67778889999999999999999999999944 333333 389999999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEEE
Q 016771 347 ATAAKAAGLEVVIS 360 (383)
Q Consensus 347 i~aA~~aG~~~i~v 360 (383)
+.+++.+|+..+.-
T Consensus 111 i~~~~~ag~~~am~ 124 (169)
T TIGR02726 111 LSMMKRVGLAVAVG 124 (169)
T ss_pred HHHHHHCCCeEECc
Confidence 99999999987643
No 81
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.51 E-value=7.4e-13 Score=120.05 Aligned_cols=101 Identities=8% Similarity=0.105 Sum_probs=81.0
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccc--e---eeeecc-----CCCCCCCHHHHHHHHH
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY--L---SGFFDT-----AVGNKRETPSYVEITN 327 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~--v---~~~~d~-----~~~~KP~p~~~~~~~~ 327 (383)
..++|++.++|+.++++|++++|+|++....++.+++++++..++.. . .+.+.. ...+++++..+..+++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~ 165 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA 165 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999966554321 1 111110 1124566777899999
Q ss_pred HcCCCCCCcEEEEecCHHhHHHHHHcCCcEEE
Q 016771 328 SLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 359 (383)
Q Consensus 328 ~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~ 359 (383)
+.+++ +++|++||||.+|+.+++.+|..++.
T Consensus 166 ~~~~~-~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 166 EEQID-LKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred HcCCC-HHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 99998 99999999999999999999987754
No 82
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.49 E-value=6.7e-13 Score=117.51 Aligned_cols=95 Identities=15% Similarity=0.110 Sum_probs=73.1
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccc-ee----eeecc------CCCCCCCHHHHHHHH
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LS----GFFDT------AVGNKRETPSYVEIT 326 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~-v~----~~~d~------~~~~KP~p~~~~~~~ 326 (383)
.+++||+.++|+.++++|++++|+|++....++.+++++++..++.. +. +.+.. ......++..+..++
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~ 151 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL 151 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence 46899999999999999999999999999999999999955443321 10 00000 111233467888888
Q ss_pred HHcCCCCCCcEEEEecCHHhHHHHHHc
Q 016771 327 NSLGVDKPSEILFVTDVYQEATAAKAA 353 (383)
Q Consensus 327 ~~l~v~~p~e~l~VGDs~~Di~aA~~a 353 (383)
++++++ +++|+||||+.+|+.+++.|
T Consensus 152 ~~~~~~-~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 152 EESKIT-LKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence 999998 99999999999999998764
No 83
>PRK10444 UMP phosphatase; Provisional
Probab=99.48 E-value=7.2e-13 Score=124.62 Aligned_cols=69 Identities=19% Similarity=0.093 Sum_probs=59.1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-HhHHHHHHcCCcEEEEeCCCCC-CCCC---CCCCeeeCCccCC
Q 016771 314 GNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNG-PLPE---NHGFKTINSFAEI 383 (383)
Q Consensus 314 ~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~-~~~~---~~~d~vI~sl~eL 383 (383)
..||+|.+|..++++++++ +++|+||||+. .|+.+|+++|+++++|.+|... ..+. ..++++++|+.||
T Consensus 172 ~gKP~~~~~~~~~~~~~~~-~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 172 VGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred cCCCCHHHHHHHHHHcCCC-cccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 4799999999999999998 99999999997 8999999999999999998333 2222 3459999998875
No 84
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.48 E-value=3.3e-13 Score=132.35 Aligned_cols=105 Identities=17% Similarity=0.142 Sum_probs=84.7
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHhhcCCCCcccc-eeeee--ccCCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSG---------------SRLAQRLIFGNSNYGDLRKY-LSGFF--DTAVGNKRE 318 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~---------------~~~~~~~~l~~~~~~~l~~~-v~~~~--d~~~~~KP~ 318 (383)
...+|||+.++|..|+++|++++|+||+ .......+++.+++. +..+ ++..+ +....+||+
T Consensus 28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~-fd~i~i~~~~~sd~~~~rKP~ 106 (354)
T PRK05446 28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK-FDEVLICPHFPEDNCSCRKPK 106 (354)
T ss_pred cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc-eeeEEEeCCcCcccCCCCCCC
Confidence 3579999999999999999999999996 244556677777542 2122 22111 234567999
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 319 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 319 p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
|+++..++++++++ |++++||||+..|+.+|+++||++|++++.
T Consensus 107 p~~l~~a~~~l~v~-~~~svmIGDs~sDi~aAk~aGi~~I~v~~~ 150 (354)
T PRK05446 107 TGLVEEYLAEGAID-LANSYVIGDRETDVQLAENMGIKGIRYARE 150 (354)
T ss_pred HHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence 99999999999998 999999999999999999999999999764
No 85
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.48 E-value=1.6e-13 Score=129.18 Aligned_cols=122 Identities=17% Similarity=0.122 Sum_probs=82.6
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeee--eccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF--FDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~--~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
..|+.....+..|+ +|.+ .|+||.+.......--..+.+.+...+... -+.....||+|.+|..++++++++ +++
T Consensus 121 ~~y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~-~~~ 197 (249)
T TIGR01457 121 IDYEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTE-REE 197 (249)
T ss_pred CCHHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCC-ccc
Confidence 35566777777775 5776 889998754321100000111111111110 022345799999999999999998 999
Q ss_pred EEEEecCH-HhHHHHHHcCCcEEEEeCCCCC-CCCC---CCCCeeeCCccCC
Q 016771 337 ILFVTDVY-QEATAAKAAGLEVVISIRPGNG-PLPE---NHGFKTINSFAEI 383 (383)
Q Consensus 337 ~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~-~~~~---~~~d~vI~sl~eL 383 (383)
|+||||++ .||.+|+++||++++|.+|... .... ..++++++++.++
T Consensus 198 ~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 198 TLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred EEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 99999997 8999999999999999998432 2222 2348999999875
No 86
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.46 E-value=2.6e-13 Score=130.80 Aligned_cols=106 Identities=17% Similarity=0.040 Sum_probs=91.1
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCC-cccceeeeec-------cCCCCCCCHHHHHHHHHH
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD-LRKYLSGFFD-------TAVGNKRETPSYVEITNS 328 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~-l~~~v~~~~d-------~~~~~KP~p~~~~~~~~~ 328 (383)
...++|++.++|+.|+++|++++|+||.+....+..++.++..+ +|+.+.+. + .....||+|.++..++++
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~-~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGR-PPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCC-cchhhhcccCCCCCCcHHHHHHHHHH
Confidence 34799999999999999999999999999999999999987665 55533331 2 233579999999999999
Q ss_pred cCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 329 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 329 l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
++..++++|+||||+.+|+++|+++||.+++|.||
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 98832799999999999999999999999999886
No 87
>PLN02645 phosphoglycolate phosphatase
Probab=99.45 E-value=1.8e-13 Score=132.97 Aligned_cols=114 Identities=13% Similarity=0.097 Sum_probs=78.0
Q ss_pred HHHHHHh-CCCeEEEEcCCcHHH-HHHHHhhcCCCCcccceeeeecc---CCCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 016771 267 ALEKWHS-LGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDT---AVGNKRETPSYVEITNSLGVDKPSEILFVT 341 (383)
Q Consensus 267 ~L~~L~~-~G~~l~IvTn~~~~~-~~~~l~~~~~~~l~~~v~~~~d~---~~~~KP~p~~~~~~~~~l~v~~p~e~l~VG 341 (383)
....|+. .| .++|+||.+... ....+...+.+.++..+..- +. ....||+|.+|..++++++++ +++|+|||
T Consensus 178 a~~~l~~~~g-~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~-~~~~~~~~gKP~p~~~~~a~~~~~~~-~~~~~~VG 254 (311)
T PLN02645 178 ATLCIRENPG-CLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGS-TEREPLVVGKPSTFMMDYLANKFGIE-KSQICMVG 254 (311)
T ss_pred HHHHHhcCCC-CEEEEeCCCCCCCCCCCCCccchHHHHHHHHHH-hCCCcccCCCChHHHHHHHHHHcCCC-cccEEEEc
Confidence 4445554 34 599999988643 22222333333333322210 11 123599999999999999998 99999999
Q ss_pred cCH-HhHHHHHHcCCcEEEEeCCC-CCCCCC-----CCCCeeeCCccCC
Q 016771 342 DVY-QEATAAKAAGLEVVISIRPG-NGPLPE-----NHGFKTINSFAEI 383 (383)
Q Consensus 342 Ds~-~Di~aA~~aG~~~i~v~~~~-~~~~~~-----~~~d~vI~sl~eL 383 (383)
|++ .||.+|+++||++++|.+|. +..... ..++++++++.+|
T Consensus 255 D~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l 303 (311)
T PLN02645 255 DRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF 303 (311)
T ss_pred CCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence 998 99999999999999999883 322221 2358999988764
No 88
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.42 E-value=3.4e-12 Score=116.51 Aligned_cols=101 Identities=13% Similarity=0.052 Sum_probs=76.4
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc--c-e-e-eeecc-CCCCCCCHHHHHHHHHHcCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK--Y-L-S-GFFDT-AVGNKRETPSYVEITNSLGV 331 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~--~-v-~-~~~d~-~~~~KP~p~~~~~~~~~l~v 331 (383)
++++||+.++|+.|++++ +++|+|++....++.+++++++..++. . + . +.+.. ....||.+..+...+++.+
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~- 144 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY- 144 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC-
Confidence 479999999999999975 999999999999999999996554432 1 1 1 11111 1134666666666665544
Q ss_pred CCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 332 DKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 332 ~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
.+|++|||+.+|+.+++.||+.+++...+
T Consensus 145 ---~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~ 173 (203)
T TIGR02137 145 ---YRVIAAGDSYNDTTMLSEAHAGILFHAPE 173 (203)
T ss_pred ---CCEEEEeCCHHHHHHHHhCCCCEEecCCH
Confidence 47999999999999999999998876654
No 89
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.37 E-value=7.2e-13 Score=101.46 Aligned_cols=69 Identities=25% Similarity=0.291 Sum_probs=59.9
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecC-HHhHHHHHHcCCcEEEEeCCC-CCCCC---CCCCCeeeCCccCC
Q 016771 314 GNKRETPSYVEITNSLGVDKPSEILFVTDV-YQEATAAKAAGLEVVISIRPG-NGPLP---ENHGFKTINSFAEI 383 (383)
Q Consensus 314 ~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs-~~Di~aA~~aG~~~i~v~~~~-~~~~~---~~~~d~vI~sl~eL 383 (383)
.+||+|.+|..++++++++ |++|+||||+ ..||.+|+++||.+|+|.+|. ..... ...++++++||.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 4799999999999999998 9999999999 699999999999999999983 33332 23459999999875
No 90
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.36 E-value=9.5e-13 Score=114.18 Aligned_cols=94 Identities=17% Similarity=0.122 Sum_probs=79.7
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCC-ccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD-LRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~-l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
...++||+.++|+.|+ ++++++|+||++...++.++++++... +++ ++++ ++....||+ |.+++++++++ |
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~--~d~~~~KP~---~~k~l~~l~~~-p 115 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFR--DECVFVKGK---YVKDLSLLGRD-L 115 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEEC--ccccccCCe---EeecHHHcCCC-h
Confidence 4579999999999999 579999999999999999999996533 334 3333 445567886 99999999998 9
Q ss_pred CcEEEEecCHHhHHHHHHcCCcE
Q 016771 335 SEILFVTDVYQEATAAKAAGLEV 357 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG~~~ 357 (383)
++|+||||++.|+.+|+++|+..
T Consensus 116 ~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 116 SNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred hcEEEEECCHHHhhcCccCEEEe
Confidence 99999999999999999999864
No 91
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.34 E-value=5e-12 Score=129.79 Aligned_cols=92 Identities=18% Similarity=0.314 Sum_probs=74.8
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcH------------HHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHH
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSR------------LAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITN 327 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~------------~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~ 327 (383)
+|||+.+.|+.|+++||+++|+||.+. ..+..+++.+++. +.-+++. +....+||+|.++..+++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip-fdviia~--~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP-FQVFIAI--GAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc-eEEEEeC--CCCCCCCCCHHHHHHHHH
Confidence 689999999999999999999999876 3567788888643 2223322 334568999999999999
Q ss_pred HcC----CCCCCcEEEEecCHHhHHHHHHcCC
Q 016771 328 SLG----VDKPSEILFVTDVYQEATAAKAAGL 355 (383)
Q Consensus 328 ~l~----v~~p~e~l~VGDs~~Di~aA~~aG~ 355 (383)
+++ ++ +++++||||+..|+.+|+++|-
T Consensus 275 ~~~~~~~Id-~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 275 EANDGTEIQ-EDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred hcCcccCCC-HHHeEEeCCcccchHHHHhcCC
Confidence 985 87 9999999999988888777765
No 92
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.30 E-value=5.7e-12 Score=106.60 Aligned_cols=91 Identities=18% Similarity=0.169 Sum_probs=72.4
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHhhcCC----CCcccceeeeeccCCCCCCCHHHHHHHHHHcC--C
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSG-SRLAQRLIFGNSNY----GDLRKYLSGFFDTAVGNKRETPSYVEITNSLG--V 331 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~-~~~~~~~~l~~~~~----~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~--v 331 (383)
++|||+.++|+.|+++|++++|+||+ ....+...++..+. ..+..+|..+. ....||+|++|..+++++| +
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~--~~~~~pkp~~~~~a~~~lg~~~ 106 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLT--IGYWLPKSPRLVEIALKLNGVL 106 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhh--hcCCCcHHHHHHHHHHHhcCCC
Confidence 47899999999999999999999999 88888888888740 00222222211 1225799999999999999 9
Q ss_pred CCCCcEEEEecCHHhHHHHHH
Q 016771 332 DKPSEILFVTDVYQEATAAKA 352 (383)
Q Consensus 332 ~~p~e~l~VGDs~~Di~aA~~ 352 (383)
. |++|+||||+..|+.+.++
T Consensus 107 ~-p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 107 K-PKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred C-cceEEEECCCHhHHHHHHh
Confidence 8 9999999999999887654
No 93
>PTZ00445 p36-lilke protein; Provisional
Probab=99.30 E-value=8.1e-12 Score=112.40 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=81.4
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHH---------------HHHHHHhhcCCCCccc----ceeeeecc------CCC
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRL---------------AQRLIFGNSNYGDLRK----YLSGFFDT------AVG 314 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~---------------~~~~~l~~~~~~~l~~----~v~~~~d~------~~~ 314 (383)
+-|+...++.+|++.|++++|+|=++.. .++..++..++.--.. |...+++. ...
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl 155 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGL 155 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcc
Confidence 5577888999999999999999988763 4677777664321111 22232332 245
Q ss_pred CCCCHHH--H--HHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 315 NKRETPS--Y--VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 315 ~KP~p~~--~--~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
.||+|++ | +.+++++|+. |++|+||+|+..++++|++.|++++.+..+
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~-peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVN-PDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCC-HHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 6999999 9 9999999998 999999999999999999999999999854
No 94
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.29 E-value=4.4e-11 Score=109.86 Aligned_cols=101 Identities=19% Similarity=0.198 Sum_probs=81.3
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-c-------eeeeec-cCCCCCCCHHHHHHHHHH
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-Y-------LSGFFD-TAVGNKRETPSYVEITNS 328 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~-------v~~~~d-~~~~~KP~p~~~~~~~~~ 328 (383)
.+++||+.++++.++++|++++|+|.+....++.+.+.+++..... . +++... .....+-+.......+++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999996544432 1 111000 011234567788899999
Q ss_pred cCCCCCCcEEEEecCHHhHHHHHHcCCcEEE
Q 016771 329 LGVDKPSEILFVTDVYQEATAAKAAGLEVVI 359 (383)
Q Consensus 329 l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~ 359 (383)
+|++ +++++++|||.+|+..-+.+|...+.
T Consensus 156 ~g~~-~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 156 LGIP-LEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred cCCC-HHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 9998 99999999999999999999998765
No 95
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.28 E-value=3.6e-11 Score=106.74 Aligned_cols=106 Identities=18% Similarity=0.179 Sum_probs=82.9
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCc---------------HHHHHHHHhhcCCCCccc-ceeeeecc--CCCCCCCHH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGS---------------RLAQRLIFGNSNYGDLRK-YLSGFFDT--AVGNKRETP 320 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~---------------~~~~~~~l~~~~~~~l~~-~v~~~~d~--~~~~KP~p~ 320 (383)
.+.||+.+.|..|++.||+++|+||.+ .......|+..+. .+.. +++.+... +..+||+|.
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv-~id~i~~Cph~p~~~c~cRKP~~g 109 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV-KIDGILYCPHHPEDNCDCRKPKPG 109 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC-ccceEEECCCCCCCCCcccCCChH
Confidence 578999999999999999999999975 1122333444432 2222 33333333 467899999
Q ss_pred HHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC-CCC
Q 016771 321 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP-GNG 366 (383)
Q Consensus 321 ~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~-~~~ 366 (383)
++..++++++++ ++..+||||+..|+++|.++|++.+.+.++ +..
T Consensus 110 m~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~ 155 (181)
T COG0241 110 MLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVT 155 (181)
T ss_pred HHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEEEcCcccc
Confidence 999999999998 999999999999999999999998888877 443
No 96
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=99.24 E-value=1.8e-11 Score=113.83 Aligned_cols=75 Identities=20% Similarity=0.222 Sum_probs=64.1
Q ss_pred EEeeecCCCC-------HHHHHHHHHHHHHhC----CCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016771 30 VVPIIENTAY-------ENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 98 (383)
Q Consensus 30 ~ipv~~n~~~-------~~~l~~~~~~~~~~~----p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~ 98 (383)
.|||+++.++ ..++++.+.++|... |+.+|+|++|||++|||+|+++|+.++|++|++|++.+.++++|
T Consensus 124 ~ip~~~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~~~~~avLl~nHG~v~~G~~l~eA~~~~e~lE~~a~~~~~a~~lg 203 (231)
T PRK08193 124 DIPCTRKMTDEEINGEYEWETGKVIVETFEKRGIDPAAVPGVLVHSHGPFTWGKDAEDAVHNAVVLEEVAKMAYFTRQLN 203 (231)
T ss_pred CcceecCCCcccccccchhhHHHHHHHHHhhccCCcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4899987654 246899999999853 46789999999999999999999999999999999999999999
Q ss_pred -CCCCCC
Q 016771 99 -LDWSTP 104 (383)
Q Consensus 99 -~~~~~~ 104 (383)
.+..++
T Consensus 204 ~~~~~l~ 210 (231)
T PRK08193 204 PQLPDMQ 210 (231)
T ss_pred CCCCCCC
Confidence 444444
No 97
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=99.24 E-value=1.9e-11 Score=112.54 Aligned_cols=67 Identities=21% Similarity=0.178 Sum_probs=61.6
Q ss_pred Eeeec-CCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016771 31 VPIIE-NTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 100 (383)
Q Consensus 31 ipv~~-n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~ 100 (383)
||+++ +.++-++|++.+.++|. +.+++||+|||+++||+|+++|+.++|++|++|++++.++++|.|
T Consensus 123 v~~~~y~~~gs~~la~~~~~~l~---~~~~vLl~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~a~~~g~~ 190 (215)
T PRK08087 123 IPCAPYATFGTRELSEHVALALK---NRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLKTLAITDP 190 (215)
T ss_pred ceeecCCCCCCHHHHHHHHHHhC---cCCEEEecCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 77777 67888899999999997 457999999999999999999999999999999999999999966
No 98
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.24 E-value=1.1e-10 Score=110.32 Aligned_cols=111 Identities=23% Similarity=0.300 Sum_probs=78.7
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHH------------HHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHH
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLA------------QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITN 327 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~------------~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~ 327 (383)
-|....+++..+++. -.+|+||.+... ....++.+ ++ .......||+|.+|..+++
T Consensus 134 ~~e~l~~a~~~i~~g--~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~---------tg-~~~~~~GKP~~~i~~~al~ 201 (269)
T COG0647 134 TYEKLAEALLAIAAG--APFIATNPDLTVPTERGLRPGAGAIAALLEQA---------TG-REPTVIGKPSPAIYEAALE 201 (269)
T ss_pred CHHHHHHHHHHHHcC--CcEEEeCCCccccCCCCCccCcHHHHHHHHHh---------hC-CcccccCCCCHHHHHHHHH
Confidence 344556677777654 688999986432 22222222 11 0112347999999999999
Q ss_pred HcCCCCCCcEEEEecCH-HhHHHHHHcCCcEEEEeCCCC-CCCCC---CCCCeeeCCccCC
Q 016771 328 SLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGN-GPLPE---NHGFKTINSFAEI 383 (383)
Q Consensus 328 ~l~v~~p~e~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~-~~~~~---~~~d~vI~sl~eL 383 (383)
+++.. +++|+||||+. .||.+|+++||.+++|..|-+ ..+.. ..++++++|+.++
T Consensus 202 ~~~~~-~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~ 261 (269)
T COG0647 202 KLGLD-RSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAEL 261 (269)
T ss_pred HhCCC-cccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHH
Confidence 99998 99999999999 999999999999999999833 33222 2237888887663
No 99
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=99.23 E-value=2.5e-11 Score=115.58 Aligned_cols=72 Identities=18% Similarity=0.193 Sum_probs=63.3
Q ss_pred EeeecC-CCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCC
Q 016771 31 VPIIEN-TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL-DWSTPN 105 (383)
Q Consensus 31 ipv~~n-~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~-~~~~~~ 105 (383)
|||+++ .+..++|++++.++|. +.+++|++|||+++||+|+++|+.++|++|++|++++.++++|. +..+++
T Consensus 180 i~vvpy~~pgs~eLa~~v~~~l~---~~~avLL~nHGvv~~G~~l~eA~~~~e~lE~~a~i~l~a~~~G~~~~~l~~ 253 (274)
T PRK03634 180 VGIVPWMVPGTDEIGQATAEKMQ---KHDLVLWPKHGVFGSGPTLDEAFGLIDTAEKSAEIYVKVLSMGGMKQTITD 253 (274)
T ss_pred eeEecCCCCCCHHHHHHHHHHhc---cCCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCH
Confidence 778776 6678899999999997 45799999999999999999999999999999999999999994 544443
No 100
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.22 E-value=2.7e-10 Score=111.11 Aligned_cols=107 Identities=16% Similarity=0.100 Sum_probs=82.0
Q ss_pred cccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhc-C-------CCCcccceee------eecc----------
Q 016771 256 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS-N-------YGDLRKYLSG------FFDT---------- 311 (383)
Q Consensus 256 ~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~-~-------~~~l~~~v~~------~~d~---------- 311 (383)
..+.++||+.++|+.|+++|++++|+||++...++.+++.+ + +.++|+.+.+ +|..
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 33578999999999999999999999999999999999986 5 5666662221 0100
Q ss_pred CCCCCCCH------------HHHHHHHHHcCCCCCCcEEEEecCH-HhHHHHH-HcCCcEEEEeCC
Q 016771 312 AVGNKRET------------PSYVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIRP 363 (383)
Q Consensus 312 ~~~~KP~p------------~~~~~~~~~l~v~~p~e~l~VGDs~-~Di~aA~-~aG~~~i~v~~~ 363 (383)
....++.. .......+.++++ +++|+||||++ .||.+|+ .+||+|++|...
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE 325 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE 325 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence 00011111 2345677888998 99999999999 9999998 999999999864
No 101
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.19 E-value=1.4e-11 Score=115.49 Aligned_cols=99 Identities=12% Similarity=0.121 Sum_probs=79.8
Q ss_pred CCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccce--eeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 016771 261 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 338 (383)
Q Consensus 261 ~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v--~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l 338 (383)
||++.++|+.|+++|+++ |+||.+.......+...+.+.++..+ .+. +.....||+|.+|..++++++..++++|+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~-~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGG-KVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCC-cEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 689999999999999997 88999887776566666555555433 221 33346899999999999999975257999
Q ss_pred EEecCH-HhHHHHHHcCCcEEEEe
Q 016771 339 FVTDVY-QEATAAKAAGLEVVISI 361 (383)
Q Consensus 339 ~VGDs~-~Di~aA~~aG~~~i~v~ 361 (383)
||||+. .|+.+|+++||++++|.
T Consensus 218 ~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred EECCCcHHHHHHHHHCCCeEEEEe
Confidence 999995 99999999999999985
No 102
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=99.18 E-value=6.9e-11 Score=109.35 Aligned_cols=75 Identities=19% Similarity=0.263 Sum_probs=65.7
Q ss_pred EEeeecCCC-CHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 016771 30 VVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPN 105 (383)
Q Consensus 30 ~ipv~~n~~-~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~~~~~~ 105 (383)
.|||+++.+ ..++|++.+.++|. .++.+++|++|||+++||+|+++|+.++|++|+.|++.+.++++|.|..+++
T Consensus 130 ~ip~~~y~~~g~~ela~~i~~~l~-~~~~~~vll~nHG~~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~~~~l~~ 205 (221)
T PRK06557 130 PIPVGPFALIGDEAIGKGIVETLK-GGRSPAVLMQNHGVFTIGKDAEDAVKAAVMVEEVARTVHIARQLGEPIPIPQ 205 (221)
T ss_pred CeeccCCcCCCcHHHHHHHHHHhC-cCCCCEEEECCCCceEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 489988775 55689999999984 3467899999999999999999999999999999999999999998765543
No 103
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=99.18 E-value=7.4e-11 Score=108.60 Aligned_cols=72 Identities=25% Similarity=0.269 Sum_probs=63.1
Q ss_pred Eeeec-CCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 016771 31 VPIIE-NTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPN 105 (383)
Q Consensus 31 ipv~~-n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~~~~~~ 105 (383)
|||.+ ..+.-.+|++.+.++|. +.++|||+|||+++||+|+++|+.++|.+|+.|++.+.++++|.+..+++
T Consensus 125 i~~~~y~~~gs~~la~~v~~~l~---~~~~vll~nHGv~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~~~~l~~ 197 (214)
T PRK06833 125 VRCAEYATFGTKELAENAFEAME---DRRAVLLANHGLLAGANNLKNAFNIAEEIEFCAEIYYQTKSIGEPKLLPE 197 (214)
T ss_pred eeeccCCCCChHHHHHHHHHHhC---cCCEEEECCCCCEEEeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 55543 46788899999999996 56899999999999999999999999999999999999999998766553
No 104
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=99.18 E-value=7e-11 Score=108.85 Aligned_cols=72 Identities=18% Similarity=0.151 Sum_probs=61.9
Q ss_pred EeeecCC-CCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 016771 31 VPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPN 105 (383)
Q Consensus 31 ipv~~n~-~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~~~~~~ 105 (383)
||+.+.. +.-++|++++.++|. +.+++||+|||+++||+|+++|+.++|.+|++|++.+.++++|.|..+++
T Consensus 128 v~~~~y~~~gs~ela~~v~~~l~---~~~~vlL~nHGv~~~G~~l~~A~~~~e~lE~~a~~~~~a~~~G~~~~l~~ 200 (217)
T PRK05874 128 VRCTEYAASGTPEVGRNAVRALE---GRAAALIANHGLVAVGPRPDQVLRVTALVERTAQIVWGARALGGPVPIPE 200 (217)
T ss_pred eeeecCCCCCcHHHHHHHHHHhC---cCCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCH
Confidence 4444432 344799999999997 56899999999999999999999999999999999999999998876654
No 105
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=99.18 E-value=6.9e-11 Score=106.00 Aligned_cols=66 Identities=18% Similarity=0.311 Sum_probs=61.4
Q ss_pred EEeeecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016771 30 VVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 98 (383)
Q Consensus 30 ~ipv~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~ 98 (383)
.|||+.+.++-++|++.+.++|. +.+++||+|||+++||+|+++|+.++|.+|+.|++.+.+++++
T Consensus 115 ~ipv~~~~~~~~~la~~v~~~l~---~~~~vll~nHG~~~~G~~i~~A~~~~e~lE~~a~i~~~~~~l~ 180 (181)
T PRK08660 115 TIPVVGGDIGSGELAENVARALS---EHKGVVVRGHGTFAIGKTLEEAYIYTSQLEHSCKVLYLVRTAK 180 (181)
T ss_pred CEeEEeCCCCCHHHHHHHHHHHh---hCCEEEEcCCCceEeCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 38999888899999999999997 5689999999999999999999999999999999999998875
No 106
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.16 E-value=9.7e-11 Score=103.32 Aligned_cols=103 Identities=20% Similarity=0.294 Sum_probs=71.1
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcC-CcHHHHHHHHhhcCCCCcc-------cceeeeeccCCCCCCCHHHHHHHHHH
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSS-GSRLAQRLIFGNSNYGDLR-------KYLSGFFDTAVGNKRETPSYVEITNS 328 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn-~~~~~~~~~l~~~~~~~l~-------~~v~~~~d~~~~~KP~p~~~~~~~~~ 328 (383)
...+||++.++|+.|+.+|++++++|- ...+.++.+|+.+++.+.. ++|+. .+ ..+-.+...|..+.++
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~-~e--I~~gsK~~Hf~~i~~~ 119 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDY-LE--IYPGSKTTHFRRIHRK 119 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECE-EE--ESSS-HHHHHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcch-hh--eecCchHHHHHHHHHh
Confidence 457999999999999999999999994 4577889999999665000 23322 11 1233667999999999
Q ss_pred cCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 329 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 329 l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
.|++ .++++|++|...++....+.|+.++.|.+|
T Consensus 120 tgI~-y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 120 TGIP-YEEMLFFDDESRNIEVVSKLGVTCVLVPDG 153 (169)
T ss_dssp H----GGGEEEEES-HHHHHHHHTTT-EEEE-SSS
T ss_pred cCCC-hhHEEEecCchhcceeeEecCcEEEEeCCC
Confidence 9998 999999999999999999999999999886
No 107
>PRK07490 hypothetical protein; Provisional
Probab=99.15 E-value=1e-10 Score=109.85 Aligned_cols=67 Identities=21% Similarity=0.191 Sum_probs=60.2
Q ss_pred EeeecCCCC--HHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016771 31 VPIIENTAY--ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 100 (383)
Q Consensus 31 ipv~~n~~~--~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~ 100 (383)
|||+++... .+++++.+.++|. +.+++|++|||++|||+|+++|+.++|++|++|++.+.++++|.+
T Consensus 134 v~~~~~y~~~~~~ela~~v~~~l~---~~~avlL~nHG~v~~G~~~~eA~~~~e~lE~~a~~~l~a~~~G~~ 202 (245)
T PRK07490 134 VAVDTLYGGMALEEEGERLAGLLG---DKRRLLMGNHGVLVTGDTVAEAFDDLYYFERACQTYITALSTGQP 202 (245)
T ss_pred eeeccCCCCcCcHHHHHHHHHHhC---cCCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 788755443 6789999999997 578999999999999999999999999999999999999999976
No 108
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=99.15 E-value=1e-10 Score=107.64 Aligned_cols=72 Identities=18% Similarity=0.123 Sum_probs=61.6
Q ss_pred Eeeec-CCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCC
Q 016771 31 VPIIE-NTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG-LDWSTPN 105 (383)
Q Consensus 31 ipv~~-n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~-~~~~~~~ 105 (383)
||+++ ..+...+|++.+.+.+. +.++|||+|||+++||+|+++|+.++|.+|++|++++.++++| .|..+++
T Consensus 122 i~~v~y~~~gs~~la~~v~~~~~---~~~~vLL~nHG~~~~G~~l~eA~~~~e~lE~~a~~~~~a~~~g~~~~~l~~ 195 (214)
T TIGR01086 122 IPCVPYATFGSTKLASEVVAGIL---KSKAILLLHHGLIIACENLLKALWLAAEVEVLAAQYLKTLLAITDPPPLLS 195 (214)
T ss_pred ccccCCCCCChHHHHHHHHHHhh---hCCEEehhcCCCEEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCH
Confidence 56555 44667899999999987 4579999999999999999999999999999999999998887 4656654
No 109
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=99.15 E-value=8e-11 Score=107.96 Aligned_cols=69 Identities=25% Similarity=0.366 Sum_probs=62.0
Q ss_pred EEeeecCCCC---HHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 016771 30 VVPIIENTAY---ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 101 (383)
Q Consensus 30 ~ipv~~n~~~---~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~~ 101 (383)
.||++++... ..++++.+.+++. +.+++|++|||++|||+|+++|+.++|.+|+.|++.+.++++|.+.
T Consensus 122 ~ip~~~~~~~~~~~~~la~~~~~~l~---~~~~vll~nHG~~~~G~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~ 193 (209)
T cd00398 122 DIPCTPYMTPETGEDEIGTQRALGFP---NSKAVLLRNHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQL 193 (209)
T ss_pred CeeecCCcCCCccHHHHHHHHhcCCC---cCCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3899998874 8888888887774 6789999999999999999999999999999999999999999653
No 110
>PRK08238 hypothetical protein; Validated
Probab=99.15 E-value=1.4e-09 Score=111.29 Aligned_cols=95 Identities=11% Similarity=0.126 Sum_probs=75.7
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcE
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 337 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~ 337 (383)
+++||+.+.|++++++|++++|+||+++..++.+++++ ++|+ ++++ +.....||+++.- .+.+.++ .+++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l---GlFd~Vigs--d~~~~~kg~~K~~-~l~~~l~---~~~~ 142 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL---GLFDGVFAS--DGTTNLKGAAKAA-ALVEAFG---ERGF 142 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CCCCEEEeC--CCccccCCchHHH-HHHHHhC---ccCe
Confidence 57899999999999999999999999999999999999 5455 4444 4445567766543 3445554 4579
Q ss_pred EEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 338 LFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 338 l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
+|+|||.+|+.+++.+| +.+.|+.+
T Consensus 143 ~yvGDS~~Dlp~~~~A~-~av~Vn~~ 167 (479)
T PRK08238 143 DYAGNSAADLPVWAAAR-RAIVVGAS 167 (479)
T ss_pred eEecCCHHHHHHHHhCC-CeEEECCC
Confidence 99999999999999999 77777643
No 111
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=99.14 E-value=1.1e-10 Score=110.73 Aligned_cols=71 Identities=23% Similarity=0.145 Sum_probs=61.7
Q ss_pred EeeecCC-CCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCC
Q 016771 31 VPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD-WSTP 104 (383)
Q Consensus 31 ipv~~n~-~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~-~~~~ 104 (383)
|||++.. +.-.+||+.+.++|+ +.+|||++|||+++||+|+++|+.++|.+|++|++++.++++|.+ ..++
T Consensus 178 i~vvp~~~pGs~eLA~~v~~~l~---~~~avLL~nHGvva~G~~l~eA~~~~E~lE~~A~i~~~a~~lg~~~~~L~ 250 (270)
T TIGR02624 178 VGIIPWMVPGTNEIGEATAEKMK---EHRLVLWPHHGIFGAGPSLDETFGLIETAEKSAEVYTKVYSQGGVKQTIS 250 (270)
T ss_pred cccccCcCCCCHHHHHHHHHHhc---cCCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 5666653 667799999999998 457999999999999999999999999999999999999999965 4444
No 112
>PRK06486 hypothetical protein; Provisional
Probab=99.14 E-value=1.1e-10 Score=110.40 Aligned_cols=84 Identities=18% Similarity=0.163 Sum_probs=67.8
Q ss_pred EEeCCceeeeecCCCCccceEEEeeecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHH
Q 016771 9 FRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLF 88 (383)
Q Consensus 9 ~~~~~~e~~k~~~~~~~~~~~~ipv~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~ 88 (383)
+.+.+++++|.++. ...+|.+++.+.-+++++.+.++|. +.+++||+|||++|||+|+++|+.++|.+|..|
T Consensus 135 l~~~~~~~~~~~g~-----i~~~~~~~~~~~s~ela~~va~al~---~~~avLL~nHG~v~~G~~l~eA~~~~~~lE~~a 206 (262)
T PRK06486 135 LTTLGQTALKFYGR-----TAVDEDYNGLALDAAEGDRIARAMG---DADIVFLKNHGVMVCGPRIAEAWDDLYYLERAC 206 (262)
T ss_pred CCcccHHHHHHCCC-----eeeccCCCCccCchhHHHHHHHHhC---cCCEEEECCCCCeEecCCHHHHHHHHHHHHHHH
Confidence 44556666655321 1224555566666899999999997 568999999999999999999999999999999
Q ss_pred HHHHHHHhcCCC
Q 016771 89 DAAIKLHQLGLD 100 (383)
Q Consensus 89 ~~~~~~~~~~~~ 100 (383)
+.++.++++|.+
T Consensus 207 ~i~~~a~~~G~~ 218 (262)
T PRK06486 207 EVQVLAMSTGRP 218 (262)
T ss_pred HHHHHHHhcCCC
Confidence 999999999966
No 113
>PRK06357 hypothetical protein; Provisional
Probab=99.11 E-value=2.1e-10 Score=105.67 Aligned_cols=68 Identities=21% Similarity=0.203 Sum_probs=58.3
Q ss_pred EEeeecCCCCHHHHHHHHHHHHHhCC---CCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016771 30 VVPIIENTAYENELTDSLAKAIDAYP---KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 99 (383)
Q Consensus 30 ~ipv~~n~~~~~~l~~~~~~~~~~~p---~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~ 99 (383)
.+|..++. .++|++.+.+++.+.+ ..+++||+|||+++||+|+++|+.++|++|++|++.+.+++++.
T Consensus 133 ~~p~~~~g--s~ela~~v~~~l~~~~~~~~~~~vLl~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~l~~ 203 (216)
T PRK06357 133 TLPFAPAT--SPELAEIVRKHLIELGDKAVPSAFLLNSHGIVITDTSLHKAYDILETIEWNAYIAYQATVFDK 203 (216)
T ss_pred eecccCCC--cHHHHHHHHHHHhhcCcccCCCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 35666655 5799999999997532 23799999999999999999999999999999999999999873
No 114
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.10 E-value=2.4e-10 Score=111.52 Aligned_cols=91 Identities=13% Similarity=0.146 Sum_probs=78.3
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhh----cCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN----SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~----~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
.+|||+.++|+.|+++|++++|+||++...+...+++ ++ +.++|..+ ....||+|+.+..+++++|+. +
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~---~~~~f~~~---~~~~~pk~~~i~~~~~~l~i~-~ 103 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFIL---QAEDFDAR---SINWGPKSESLRKIAKKLNLG-T 103 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccC---cHHHeeEE---EEecCchHHHHHHHHHHhCCC-c
Confidence 4789999999999999999999999999999999998 53 33333331 123799999999999999998 9
Q ss_pred CcEEEEecCHHhHHHHHHcCCc
Q 016771 335 SEILFVTDVYQEATAAKAAGLE 356 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG~~ 356 (383)
++|+||||++.|+.++++++-.
T Consensus 104 ~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 104 DSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred CcEEEECCCHHHHHHHHHHCCC
Confidence 9999999999999999998764
No 115
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.09 E-value=4.1e-10 Score=105.15 Aligned_cols=49 Identities=22% Similarity=0.308 Sum_probs=45.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcE-EEEecCH-HhHHHHHHcCCcEEEEeCC
Q 016771 314 GNKRETPSYVEITNSLGVDKPSEI-LFVTDVY-QEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 314 ~~KP~p~~~~~~~~~l~v~~p~e~-l~VGDs~-~Di~aA~~aG~~~i~v~~~ 363 (383)
..||+|.+|..++++++++ ++++ +||||+. .||.+|+++|+++++|.+|
T Consensus 186 ~~KP~~~~~~~~~~~~~~~-~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 186 VGKPSPAIYRAALNLLQAR-PERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred ecCCCHHHHHHHHHHhCCC-CccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 5799999999999999998 8887 9999999 8999999999999999875
No 116
>PRK08130 putative aldolase; Validated
Probab=99.09 E-value=2.6e-10 Score=104.90 Aligned_cols=66 Identities=27% Similarity=0.317 Sum_probs=60.1
Q ss_pred EEeeecC-CCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016771 30 VVPIIEN-TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 98 (383)
Q Consensus 30 ~ipv~~n-~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~ 98 (383)
.|||+++ .+..++|++.+.+++. +..++|++|||+++||+|+++|+.++|.+|..|++.+.++.++
T Consensus 127 ~i~v~~y~~~g~~~la~~~~~~l~---~~~~vll~nHGvi~~G~s~~~A~~~~e~lE~~a~~~~~a~~~~ 193 (213)
T PRK08130 127 HVPLIPYYRPGDPAIAEALAGLAA---RYRAVLLANHGPVVWGSSLEAAVNATEELEETAKLILLLGGRP 193 (213)
T ss_pred ccceECCCCCChHHHHHHHHHHhc---cCCEEEEcCCCCeeeCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3899987 5788899999999997 5689999999999999999999999999999999999887664
No 117
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.09 E-value=3.4e-10 Score=101.67 Aligned_cols=82 Identities=12% Similarity=0.223 Sum_probs=71.4
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHH
Q 016771 266 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ 345 (383)
Q Consensus 266 e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~ 345 (383)
..++.|+++|++++|+||.+...++..++.++ +..++.+ .++++..+..+++++|++ +++|+||||+.+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lg---l~~~f~g-------~~~k~~~l~~~~~~~gl~-~~ev~~VGDs~~ 123 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLG---ITHLYQG-------QSNKLIAFSDLLEKLAIA-PEQVAYIGDDLI 123 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcC---CceeecC-------CCcHHHHHHHHHHHhCCC-HHHEEEECCCHH
Confidence 37888889999999999999999999999994 4333333 466789999999999998 999999999999
Q ss_pred hHHHHHHcCCcEE
Q 016771 346 EATAAKAAGLEVV 358 (383)
Q Consensus 346 Di~aA~~aG~~~i 358 (383)
|+.+|+++|+.++
T Consensus 124 D~~~a~~aG~~~~ 136 (183)
T PRK09484 124 DWPVMEKVGLSVA 136 (183)
T ss_pred HHHHHHHCCCeEe
Confidence 9999999999844
No 118
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=99.08 E-value=3.1e-10 Score=102.05 Aligned_cols=63 Identities=27% Similarity=0.242 Sum_probs=57.4
Q ss_pred EEeeecCC-CCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHH
Q 016771 30 VVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLH 95 (383)
Q Consensus 30 ~ipv~~n~-~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~ 95 (383)
.|||+++. +.-++|++.+.++|. +.+++|++|||+++||+|+++|+.++|++|..+++.+.++
T Consensus 120 ~v~v~~~~~~g~~~la~~~~~~l~---~~~~vll~nHGv~~~G~~~~eA~~~~e~lE~~A~~~~~~~ 183 (184)
T PRK08333 120 KIPILPFRPAGSVELAEQVAEAMK---EYDAVIMERHGIVTVGRSLREAFYKAELVEESAKLWYLKF 183 (184)
T ss_pred CEeeecCCCCCcHHHHHHHHHHhc---cCCEEEEcCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 49999887 477899999999997 5679999999999999999999999999999999998765
No 119
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=99.08 E-value=4.9e-10 Score=98.36 Aligned_cols=95 Identities=20% Similarity=0.218 Sum_probs=66.8
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCc---H-----------HHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHH
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGS---R-----------LAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEI 325 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~---~-----------~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~ 325 (383)
..|++.+.|++|.+.||+++|+||.+ . ..+..+++.+++. +.-+++. .....+||.+.++..+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip-~~~~~a~--~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP-IQVYAAP--HKDPCRKPNPGMWEFA 106 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS--EEEEECG--CSSTTSTTSSHHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc-eEEEecC--CCCCCCCCchhHHHHH
Confidence 44689999999999999999999983 1 2344566666332 1112222 2235799999999999
Q ss_pred HHHcCC----CCCCcEEEEecC-----------HHhHHHHHHcCCcEE
Q 016771 326 TNSLGV----DKPSEILFVTDV-----------YQEATAAKAAGLEVV 358 (383)
Q Consensus 326 ~~~l~v----~~p~e~l~VGDs-----------~~Di~aA~~aG~~~i 358 (383)
++.++. + .++++||||+ ..|..-|.++|++..
T Consensus 107 ~~~~~~~~~id-~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 107 LKDYNDGVEID-LANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp CCCTSTT--S--CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred HHhcccccccc-ccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 999875 7 8999999996 589999999999854
No 120
>PRK11590 hypothetical protein; Provisional
Probab=99.06 E-value=2.1e-08 Score=92.03 Aligned_cols=99 Identities=9% Similarity=0.030 Sum_probs=69.3
Q ss_pred cccCCCHHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccC-------CCCCCCHHHHHHHHHHc
Q 016771 258 GEVFDDVPEAL-EKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTA-------VGNKRETPSYVEITNSL 329 (383)
Q Consensus 258 ~~~~pgv~e~L-~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~-------~~~KP~p~~~~~~~~~l 329 (383)
..+|||+.++| +.|+++|++++|+||++...++.+++.+++....++++.-.+.. ..+... +=...+.+.+
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~-~K~~~l~~~~ 172 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGH-EKVAQLERKI 172 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCCh-HHHHHHHHHh
Confidence 46799999999 57898999999999999999999999885322233333211110 111111 1123344455
Q ss_pred CCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 330 GVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 330 ~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
+.+ ...+.+-|||.+|+.--.-+|-..+
T Consensus 173 ~~~-~~~~~aY~Ds~~D~pmL~~a~~~~~ 200 (211)
T PRK11590 173 GTP-LRLYSGYSDSKQDNPLLYFCQHRWR 200 (211)
T ss_pred CCC-cceEEEecCCcccHHHHHhCCCCEE
Confidence 666 7889999999999999999997754
No 121
>PRK05834 hypothetical protein; Provisional
Probab=99.04 E-value=5.3e-10 Score=101.23 Aligned_cols=68 Identities=6% Similarity=0.139 Sum_probs=57.0
Q ss_pred EeeecCCC---CHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016771 31 VPIIENTA---YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 99 (383)
Q Consensus 31 ipv~~n~~---~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~ 99 (383)
|||++... ....+++++.++|.+. ..+|+||+|||+++||+|+++|+..+|.+|+.|++.+.++++|.
T Consensus 122 ipv~~~~~~~~~~~~la~~v~~~l~~~-~~~avLL~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~~~~ 192 (194)
T PRK05834 122 ISIYDPKDFDDWYERADTEILRYLQEK-NKNFVVIKGYGVYAYARDIYELAKKIAILENSCKILRLSDLMDR 192 (194)
T ss_pred eeecCccccchHHHhHHHHHHHHHhhc-CCCEEEEcCCcceEECCCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 78876322 2346889999999732 24699999999999999999999999999999999999998874
No 122
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.04 E-value=9.7e-09 Score=97.40 Aligned_cols=96 Identities=18% Similarity=0.225 Sum_probs=76.7
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcc-cceeee--e--ccCCCCCCCH---------HHH
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGF--F--DTAVGNKRET---------PSY 322 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~-~~v~~~--~--d~~~~~KP~p---------~~~ 322 (383)
...+.||+.++|+.|+++|++++|+|++....++..++++++...+ .+++-. | +....+||.| ..+
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 4689999999999999999999999999999999999998543222 232211 2 2233458888 778
Q ss_pred HHHHHHcC--CCCCCcEEEEecCHHhHHHHHHc
Q 016771 323 VEITNSLG--VDKPSEILFVTDVYQEATAAKAA 353 (383)
Q Consensus 323 ~~~~~~l~--v~~p~e~l~VGDs~~Di~aA~~a 353 (383)
+.+++.++ .. +++|++|||+.+|+.+|..+
T Consensus 199 ~~~~~~~~~~~~-~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 199 LRNTEYFNQLKD-RSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHhCccCC-cceEEEECcChhhhhHhcCC
Confidence 78888888 76 99999999999999998766
No 123
>PRK06208 hypothetical protein; Provisional
Probab=99.02 E-value=7.1e-10 Score=105.40 Aligned_cols=72 Identities=15% Similarity=0.135 Sum_probs=63.3
Q ss_pred EeeecCCCC---HHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 016771 31 VPIIENTAY---ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPN 105 (383)
Q Consensus 31 ipv~~n~~~---~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~~~~~~ 105 (383)
||++++... -.+|++.+.++|. +.+++|++|||++|||+|+++|+.++|.+|..|+..+.++++|.+..+++
T Consensus 164 ip~~~~~~g~~~s~ela~~va~~l~---~~~avLL~NHGvv~~G~tl~eA~~~~e~lE~aA~i~l~a~~~G~~~~L~~ 238 (274)
T PRK06208 164 HALFDDFTGVVVDTSEGRRIAAALG---THKAVILQNHGLLTVGPSVDAAAWWFIALERACQTQLLAEAAGPPQPIDH 238 (274)
T ss_pred ceeccCCCCccCchHHHHHHHHHhc---cCCEEEECCCCceEeeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCH
Confidence 788887654 4689999999998 45799999999999999999999999999999999999999997755543
No 124
>PRK07044 aldolase II superfamily protein; Provisional
Probab=98.99 E-value=1.3e-09 Score=102.71 Aligned_cols=71 Identities=15% Similarity=0.204 Sum_probs=59.4
Q ss_pred EeeecCCC--CHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 016771 31 VPIIENTA--YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTP 104 (383)
Q Consensus 31 ipv~~n~~--~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~~~~~ 104 (383)
||+.+... --.++++.+.++|. +.++||++|||++|||+|+++|+.++|.+|++|++++.++++|.+..+.
T Consensus 139 i~~~~y~~~~~~~e~~~~va~~l~---~~~avLL~nHGvi~~G~~l~eA~~~~e~lE~~a~~~~~a~~lG~~~~~~ 211 (252)
T PRK07044 139 LAYHDYEGIALDLDEGERLVADLG---DKPAMLLRNHGLLTVGRTVAEAFLLMYTLERACEIQVAAQAGGGELVLP 211 (252)
T ss_pred ceeeCCCCCcCCHHHHHHHHHHhc---cCCEEEECCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 56665542 13677888888887 5689999999999999999999999999999999999999999764433
No 125
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.99 E-value=3.7e-09 Score=93.06 Aligned_cols=86 Identities=17% Similarity=0.149 Sum_probs=60.2
Q ss_pred HHHHHHHhCCC--eEEEEcCCc-------HHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcC-----C
Q 016771 266 EALEKWHSLGT--KVYIYSSGS-------RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLG-----V 331 (383)
Q Consensus 266 e~L~~L~~~G~--~l~IvTn~~-------~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~-----v 331 (383)
+.+++|++.+. ++.|+||+. ...++.+-+.+++ +++.. ...|| ..+..+++.++ .
T Consensus 66 ~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI----pvl~h-----~~kKP--~~~~~i~~~~~~~~~~~ 134 (168)
T PF09419_consen 66 EWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI----PVLRH-----RAKKP--GCFREILKYFKCQKVVT 134 (168)
T ss_pred HHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC----cEEEe-----CCCCC--ccHHHHHHHHhhccCCC
Confidence 34444555544 599999983 5666666677732 12221 13577 55556655553 3
Q ss_pred CCCCcEEEEecCH-HhHHHHHHcCCcEEEEeCC
Q 016771 332 DKPSEILFVTDVY-QEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 332 ~~p~e~l~VGDs~-~Di~aA~~aG~~~i~v~~~ 363 (383)
+ |+|+++|||.. .|+.+|+..|+.+||+..|
T Consensus 135 ~-p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 135 S-PSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred C-chhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 4 99999999999 9999999999999999876
No 126
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.97 E-value=1.1e-08 Score=94.92 Aligned_cols=105 Identities=15% Similarity=0.137 Sum_probs=75.5
Q ss_pred ccccCCCHHHHHHHH--HhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceee--eeccC----------CCCCC----
Q 016771 257 EGEVFDDVPEALEKW--HSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSG--FFDTA----------VGNKR---- 317 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L--~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~--~~d~~----------~~~KP---- 317 (383)
.+++.||+.++++.+ +..|+.+.|+|.+....++.+|++.++.+.+. +++. .|+.. ..++.
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPN 148 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCc
Confidence 468999999999999 45799999999999999999999997766553 2221 11110 01111
Q ss_pred --CHHHHHHHHHH---cCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeC
Q 016771 318 --ETPSYVEITNS---LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 362 (383)
Q Consensus 318 --~p~~~~~~~~~---l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~ 362 (383)
+-.+....++. -|+. .++++||||+.+|+-++.+.+-.=+...|
T Consensus 149 mCK~~il~~~~~~~~~~g~~-~~rviYiGDG~nD~Cp~~~L~~~D~v~~R 197 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVP-YDRVIYIGDGRNDFCPALRLRPRDVVFPR 197 (234)
T ss_pred cchHHHHHHHHHHHhhcCCC-cceEEEECCCCCCcCcccccCCCCEEecC
Confidence 22444555544 3676 88999999999999999998776555554
No 127
>PRK06661 hypothetical protein; Provisional
Probab=98.94 E-value=2.8e-09 Score=99.21 Aligned_cols=63 Identities=16% Similarity=0.203 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCC
Q 016771 41 NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL-GLDWSTPNH 106 (383)
Q Consensus 41 ~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~-~~~~~~~~~ 106 (383)
+++++.+.+++. +.+|+||+|||++|||+|+++|+..+|.+|..|++++.++++ |.|..+++.
T Consensus 137 ~~~~~~~a~~l~---~~~avll~nHG~v~~G~sl~eA~~~~~~lE~~a~~~~~a~~~~g~~~~l~~~ 200 (231)
T PRK06661 137 DKQSSRLVNDLK---QNYVMLLRNHGAITCGKTIHEAMFYTYHLEQACKTQCLLNSTKKQELIIPSV 200 (231)
T ss_pred hhHHHHHHHHhC---CCCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 467888888886 568999999999999999999999999999999999999999 888666664
No 128
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.94 E-value=2.1e-08 Score=89.65 Aligned_cols=88 Identities=17% Similarity=0.235 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccC-------CCCC---CCHHHHHHH---HHH
Q 016771 262 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTA-------VGNK---RETPSYVEI---TNS 328 (383)
Q Consensus 262 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~-------~~~K---P~p~~~~~~---~~~ 328 (383)
|++.++|+.++++|++++|+|.++...++.+++.+++....-+.+..++.. ...+ -+...+..+ ...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 455599999999999999999999999999999885543221222221111 0000 134555555 333
Q ss_pred cCCCCCCcEEEEecCHHhHHHHH
Q 016771 329 LGVDKPSEILFVTDVYQEATAAK 351 (383)
Q Consensus 329 l~v~~p~e~l~VGDs~~Di~aA~ 351 (383)
+.. +..+++||||.+|+.+++
T Consensus 172 -~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 172 -DID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp -THT-CCEEEEEESSGGGHHHHH
T ss_pred -CCC-CCeEEEEECCHHHHHHhC
Confidence 776 899999999999999875
No 129
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.94 E-value=3e-09 Score=94.78 Aligned_cols=69 Identities=25% Similarity=0.318 Sum_probs=56.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-HhHHHHHHcCCcEEEEeCCCCCC--C--CCCCCCeeeCCccC
Q 016771 313 VGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP--L--PENHGFKTINSFAE 382 (383)
Q Consensus 313 ~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~--~--~~~~~d~vI~sl~e 382 (383)
...||+|.+|..+++.+|++ |++|+||||.. .|+.+|.++||+.|.|..|.-.+ + +...+|.+.++|.+
T Consensus 178 vvGKP~~~fFe~al~~~gv~-p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~ 251 (262)
T KOG3040|consen 178 VVGKPSPFFFESALQALGVD-PEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFAD 251 (262)
T ss_pred EecCCCHHHHHHHHHhcCCC-hHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHH
Confidence 45799999999999999998 99999999998 79999999999999999882222 2 22223667777653
No 130
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.94 E-value=4.7e-09 Score=99.44 Aligned_cols=115 Identities=12% Similarity=0.051 Sum_probs=72.9
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCc-----HHHHHHHHhhcCCCCccccee--eeeccCCCCCCCHHHHHHHHHHcCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGS-----RLAQRLIFGNSNYGDLRKYLS--GFFDTAVGNKRETPSYVEITNSLGV 331 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~-----~~~~~~~l~~~~~~~l~~~v~--~~~d~~~~~KP~p~~~~~~~~~l~v 331 (383)
..++++.+++..++..+..+.++++.+ ....+.+.+.++ +....+ .+++.....-.++..++.+++.+|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi 213 (272)
T PRK10530 137 PTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELG---LECEWSWHDQVDIARKGNSKGKRLTQWVEAQGW 213 (272)
T ss_pred cceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcC---ceEEEecCceEEEecCCCChHHHHHHHHHHcCC
Confidence 346778888888887777777777754 222333344442 211111 1123222333456789999999999
Q ss_pred CCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCc
Q 016771 332 DKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSF 380 (383)
Q Consensus 332 ~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl 380 (383)
+ +++|++|||+.+|+.+++.+|+. +.+.+ ..+.+...+++++.+-
T Consensus 214 ~-~~e~i~~GD~~NDi~m~~~ag~~-vamgn--a~~~lk~~Ad~v~~~n 258 (272)
T PRK10530 214 S-MKNVVAFGDNFNDISMLEAAGLG-VAMGN--ADDAVKARADLVIGDN 258 (272)
T ss_pred C-HHHeEEeCCChhhHHHHHhcCce-EEecC--chHHHHHhCCEEEecC
Confidence 8 99999999999999999999973 33332 2233333457777653
No 131
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=98.93 E-value=2e-09 Score=96.62 Aligned_cols=62 Identities=32% Similarity=0.501 Sum_probs=55.3
Q ss_pred EEEeeecCCC-CHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHH
Q 016771 29 LVVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAI 92 (383)
Q Consensus 29 ~~ipv~~n~~-~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~ 92 (383)
-.||+++|.. ..+++++.+.++|. .+.+++|++|||+++||+|+++|+.++|.+|+.|++++
T Consensus 122 ~~v~~~~~~~~~~~~l~~~i~~~l~--~~~~~vll~nHG~~~~G~s~~~A~~~~~~lE~~a~~~l 184 (184)
T PF00596_consen 122 GEVPVVPYAPPGSEELAEAIAEALG--EDRKAVLLRNHGVVVWGKSLEEAFYRAEYLERAAEIQL 184 (184)
T ss_dssp SCEEEE-THSTTCHHHHHHHHHHHT--CTSSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeeccccccchhhhhhhhhhhc--CCceEEeecCCceEEEeCCHHHHHHHHHHHHHHHHHhC
Confidence 3599999998 66889999999997 36799999999999999999999999999999999875
No 132
>PRK13213 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=98.90 E-value=4.1e-09 Score=97.79 Aligned_cols=76 Identities=24% Similarity=0.297 Sum_probs=61.1
Q ss_pred EeeecCC-------CCHHHHHHHHHHHHHhC----CCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhc-C
Q 016771 31 VPIIENT-------AYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL-G 98 (383)
Q Consensus 31 ipv~~n~-------~~~~~l~~~~~~~~~~~----p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~-~ 98 (383)
||+.+.. ....++++.+.+++.+. ++..|+||+|||+++||+|+.+|+..+|.+|+++++++.++++ |
T Consensus 126 Ip~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~avlL~nHG~v~~G~~l~eA~~~~e~lE~~A~i~~~a~~l~g 205 (231)
T PRK13213 126 IPCTRLMTEAEITGDYEHETGKVIVETFAEQGLRAADIPAVLVNGHGPFAWGSNAANAVHNAVVLEEIAYMNLFTHQLTP 205 (231)
T ss_pred cceeecccccccCCccccchHHHHHHHHHhhcccccCCCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6666543 22457777877777532 4568999999999999999999999999999999999999999 7
Q ss_pred CCCCCCCC
Q 016771 99 LDWSTPNH 106 (383)
Q Consensus 99 ~~~~~~~~ 106 (383)
.+..+++.
T Consensus 206 ~~~~l~~~ 213 (231)
T PRK13213 206 GVGDMQQT 213 (231)
T ss_pred CCCCCCHH
Confidence 77666543
No 133
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.88 E-value=1.5e-07 Score=86.32 Aligned_cols=99 Identities=10% Similarity=0.070 Sum_probs=68.6
Q ss_pred cccCCCHHHHHH-HHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeecc-C------CCCCCCHHHHHHHHHHc
Q 016771 258 GEVFDDVPEALE-KWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-A------VGNKRETPSYVEITNSL 329 (383)
Q Consensus 258 ~~~~pgv~e~L~-~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~-~------~~~KP~p~~~~~~~~~l 329 (383)
..++||+.++|+ .++++|++++|+||++...++.+.+..++.+..++++.-... . ..+.. ++=...+.+.+
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g-~~Kv~rl~~~~ 171 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLG-HEKVAQLEQKI 171 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCC-hHHHHHHHHHh
Confidence 368999999996 789899999999999999999998876442333433321111 0 11111 11122333445
Q ss_pred CCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 330 GVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 330 ~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
+.+ .+.+.+-|||.+|+..-.-+|-..+
T Consensus 172 ~~~-~~~~~aYsDS~~D~pmL~~a~~~~~ 199 (210)
T TIGR01545 172 GSP-LKLYSGYSDSKQDNPLLAFCEHRWR 199 (210)
T ss_pred CCC-hhheEEecCCcccHHHHHhCCCcEE
Confidence 655 7789999999999999999998754
No 134
>COG0235 AraD Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]
Probab=98.86 E-value=1.2e-09 Score=100.89 Aligned_cols=85 Identities=27% Similarity=0.332 Sum_probs=60.7
Q ss_pred CeEEeCCceeeeecCCCC----ccceEEEeeecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHH
Q 016771 7 KEFRITHMEMIKGIKGHG----YYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAE 82 (383)
Q Consensus 7 ~~~~~~~~e~~k~~~~~~----~~~~~~ipv~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e 82 (383)
..+...++|+++.|++.. +.....+++..|......+++.+.. ||+|||+++||+|+++|+.++|
T Consensus 111 ~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------ll~~HG~~~~G~~l~eA~~~~~ 179 (219)
T COG0235 111 EPLPPLGTEHLKYFGGGIPCAPYAGPGSVELAEALAEAADLAEAVLK-----------LLRNHGVVAWGKTLAEAVHLAE 179 (219)
T ss_pred CCCCCCCHHHHHHcCCCcccccCCCCCchhhHHHHHHHHHHHHHHHH-----------HHHcCCcEEECCCHHHHHHHHH
Confidence 346677888898887641 1122223333333333333332221 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCC
Q 016771 83 CYHYLFDAAIKLHQLGLDWS 102 (383)
Q Consensus 83 ~~e~l~~~~~~~~~~~~~~~ 102 (383)
.+|++|++.+.++++|.+..
T Consensus 180 ~lE~~a~~~~~~~~~~~~~~ 199 (219)
T COG0235 180 VLEELAKLQLKALSLGKPLL 199 (219)
T ss_pred HHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999998875
No 135
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.85 E-value=6.6e-09 Score=97.31 Aligned_cols=89 Identities=12% Similarity=0.140 Sum_probs=67.4
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHH--HHHhhcCCCC-cccc-eeeeeccCCCCCCCHHHHHHHHHHcCCCCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQR--LIFGNSNYGD-LRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~--~~l~~~~~~~-l~~~-v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
.+|||+.++|++|+++|++++++||+++.... ..++++++.. .++. +++ +.. ....+..+++++++. |
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s--~~~-----~~~~l~~~~~~~~~~-~ 95 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISS--GEI-----AVQMILESKKRFDIR-N 95 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEcc--HHH-----HHHHHHhhhhhccCC-C
Confidence 36899999999999999999999999877665 6788886553 4432 222 111 014667777888997 9
Q ss_pred CcEEEEecCHHhHHHHHHcCC
Q 016771 335 SEILFVTDVYQEATAAKAAGL 355 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG~ 355 (383)
++|++|||+..|+.....+|.
T Consensus 96 ~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 96 GIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred ceEEEeCCcccchhhhcCCCc
Confidence 999999999988887766554
No 136
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.81 E-value=3.2e-08 Score=93.70 Aligned_cols=85 Identities=12% Similarity=0.110 Sum_probs=60.9
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcH---HHHHHHHhhcCCCCcc-cceeeeeccCCCCCCCHHHHHHHHHHcCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSR---LAQRLIFGNSNYGDLR-KYLSGFFDTAVGNKRETPSYVEITNSLGVD 332 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~---~~~~~~l~~~~~~~l~-~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~ 332 (383)
...++||+.++|+.|+++|++++++||.+. ..+...++.+++...+ +.+.. .. ..++++..+..+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lll--r~--~~~~K~~rr~~I~~~y~I- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLL--KK--DKSSKESRRQKVQKDYEI- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEe--CC--CCCCcHHHHHHHHhcCCE-
Confidence 347899999999999999999999999874 4455677777554322 22211 11 235666777777765543
Q ss_pred CCCcEEEEecCHHhHHHH
Q 016771 333 KPSEILFVTDVYQEATAA 350 (383)
Q Consensus 333 ~p~e~l~VGDs~~Di~aA 350 (383)
+++|||+..|+.++
T Consensus 191 ----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 ----VLLFGDNLLDFDDF 204 (266)
T ss_pred ----EEEECCCHHHhhhh
Confidence 89999999999664
No 137
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.81 E-value=6.7e-09 Score=88.77 Aligned_cols=82 Identities=18% Similarity=0.296 Sum_probs=71.3
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHh
Q 016771 267 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 346 (383)
Q Consensus 267 ~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~D 346 (383)
.|+.|.+.|++++|+|......++...+.+ ++..++.| .+-+-..|..+++++++. +++|.||||..+|
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~L---GI~~~~qG-------~~dK~~a~~~L~~~~~l~-~e~~ayiGDD~~D 111 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDL---GIKHLYQG-------ISDKLAAFEELLKKLNLD-PEEVAYVGDDLVD 111 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHc---CCceeeec-------hHhHHHHHHHHHHHhCCC-HHHhhhhcCcccc
Confidence 677788899999999999999999999999 44444555 344568999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEE
Q 016771 347 ATAAKAAGLEVVI 359 (383)
Q Consensus 347 i~aA~~aG~~~i~ 359 (383)
+..-.++|+.++.
T Consensus 112 lpvm~~vGls~a~ 124 (170)
T COG1778 112 LPVMEKVGLSVAV 124 (170)
T ss_pred HHHHHHcCCcccc
Confidence 9999999998653
No 138
>PRK12347 sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=98.80 E-value=1.8e-08 Score=93.68 Aligned_cols=58 Identities=21% Similarity=0.312 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHhC----CCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016771 41 NELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 98 (383)
Q Consensus 41 ~~l~~~~~~~~~~~----p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~ 98 (383)
.++++.+.++|..+ ++.+++||+|||+++||+|+.+|+..+|.+|+.+++.+.++++|
T Consensus 143 ~e~~~~va~~l~~~~~~~~~~~avLL~NHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg 204 (231)
T PRK12347 143 YQTGEVIIETFEERGISPAQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLA 204 (231)
T ss_pred hhhHHHHHHHHhhccccccCCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46888999998754 35689999999999999999999999999999999999999999
No 139
>PRK12348 sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=98.79 E-value=2.2e-08 Score=93.08 Aligned_cols=61 Identities=15% Similarity=0.220 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHhC--CCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016771 40 ENELTDSLAKAIDAY--PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 100 (383)
Q Consensus 40 ~~~l~~~~~~~~~~~--p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~ 100 (383)
..++++.+.++|... .+.+++|++|||++|||+|+.+|+..+|.+|..|++.+.++++|.+
T Consensus 140 ~~~~~~~la~~l~~~~~~~~~avlL~nHG~v~~G~~l~eA~~~~~~lE~~a~~~~~a~~lg~~ 202 (228)
T PRK12348 140 ELNTGKVIIETLGNAEPLHTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARGINPQ 202 (228)
T ss_pred hhhHHHHHHHHHhhcCcccCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 346788888888742 2457999999999999999999999999999999999999999953
No 140
>TIGR00760 araD L-ribulose-5-phosphate 4-epimerase. The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD.
Probab=98.78 E-value=2.6e-08 Score=92.69 Aligned_cols=70 Identities=24% Similarity=0.358 Sum_probs=58.7
Q ss_pred EeeecCC-------CCHHHHHHHHHHHHHhC----CCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016771 31 VPIIENT-------AYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 99 (383)
Q Consensus 31 ipv~~n~-------~~~~~l~~~~~~~~~~~----p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~ 99 (383)
||++++. ...+++++.+.+++... .+.+|+|++|||+++||+|+.+|+..+|.+|+.|++.+.++++|.
T Consensus 126 ip~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~avlL~nHGvv~~G~~l~eA~~~~e~lE~~Ak~~~~a~~~g~ 205 (231)
T TIGR00760 126 IPCTRPMTDEEINGEYELETGKVIVETFEKRGIDPAQIPGVLVHSHGPFAWGKDAANAVHNAVVLEEVAYMALFSRQLNP 205 (231)
T ss_pred eeeecCCCcccccccchHhHHHHHHHHHhhccCCcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7776543 22457899999999743 123799999999999999999999999999999999999999995
Q ss_pred C
Q 016771 100 D 100 (383)
Q Consensus 100 ~ 100 (383)
+
T Consensus 206 ~ 206 (231)
T TIGR00760 206 Q 206 (231)
T ss_pred C
Confidence 3
No 141
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.78 E-value=1.3e-08 Score=106.10 Aligned_cols=110 Identities=17% Similarity=0.159 Sum_probs=82.6
Q ss_pred ccccCCCHHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~-~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
..+++||+.++|+.|+++|+ +++++||.+...++..++++++. +++.. ..|++. ..++++++.+ .+
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~---~~f~~-------~~p~~K--~~~i~~l~~~-~~ 426 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID---EVHAE-------LLPEDK--LEIVKELREK-YG 426 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---hhhhc-------cCcHHH--HHHHHHHHhc-CC
Confidence 34799999999999999999 99999999999999999999543 33332 123222 4566777776 88
Q ss_pred cEEEEecCHHhHHHHHHcCCcEEEEeCCC-CCCCCCCCCCeee--CCccC
Q 016771 336 EILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLPENHGFKTI--NSFAE 382 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~aG~~~i~v~~~~-~~~~~~~~~d~vI--~sl~e 382 (383)
+|+||||+.+|+.++++||+ .+.++. ..+.....+|.++ +++.+
T Consensus 427 ~v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~~ad~vl~~~~l~~ 473 (536)
T TIGR01512 427 PVAMVGDGINDAPALAAADV---GIAMGASGSDVAIETADVVLLNDDLSR 473 (536)
T ss_pred EEEEEeCCHHHHHHHHhCCE---EEEeCCCccHHHHHhCCEEEECCCHHH
Confidence 99999999999999999995 556652 2222223447877 66654
No 142
>PRK13145 araD L-ribulose-5-phosphate 4-epimerase; Provisional
Probab=98.73 E-value=3.4e-08 Score=92.04 Aligned_cols=59 Identities=19% Similarity=0.295 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHhCC----CCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016771 40 ENELTDSLAKAIDAYP----KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 98 (383)
Q Consensus 40 ~~~l~~~~~~~~~~~p----~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~ 98 (383)
.+++++.+.+++...+ +.+++||+|||+++||+|+++|+..+|.+|+.+++++.++++|
T Consensus 142 ~~~~~~~va~~l~~~~~~~~~~~avLL~nHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg 204 (234)
T PRK13145 142 EKETGSVIIEEFEKRGLDPMAVPGIVVRNHGPFTWGKNPEQAVYHSVVLEEVAKMNRLTEQIN 204 (234)
T ss_pred chhhHHHHHHHHhhhccccccCCEEEEcCCCeeEecCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3467888888887421 2579999999999999999999999999999999999999998
No 143
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.73 E-value=2.7e-07 Score=81.69 Aligned_cols=93 Identities=18% Similarity=0.218 Sum_probs=68.3
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCC--ccc-----ceeee---ecc---CCCCCCCHHHHH
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD--LRK-----YLSGF---FDT---AVGNKRETPSYV 323 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~--l~~-----~v~~~---~d~---~~~~KP~p~~~~ 323 (383)
...+-||++++...|+++|..++++|.+-+..+..+-..+++.- .+. ...|- |+. ...+--+++.+.
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~ 165 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIA 165 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHH
Confidence 56899999999999999999999999999999998888886543 111 01111 122 111223456677
Q ss_pred HHHHHcCCCCCCcEEEEecCHHhHHHHHH
Q 016771 324 EITNSLGVDKPSEILFVTDVYQEATAAKA 352 (383)
Q Consensus 324 ~~~~~l~v~~p~e~l~VGDs~~Di~aA~~ 352 (383)
.+.+ +.. .+.++||||..+|++|..-
T Consensus 166 ~lrk--~~~-~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 166 LLRK--NYN-YKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHh--CCC-hheeEEecCCccccccCCc
Confidence 7766 776 7899999999999998766
No 144
>PRK07090 class II aldolase/adducin domain protein; Provisional
Probab=98.72 E-value=2.9e-08 Score=93.93 Aligned_cols=62 Identities=23% Similarity=0.167 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 016771 41 NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPN 105 (383)
Q Consensus 41 ~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~~~~~~ 105 (383)
.++++.+.++|. +..++|++|||++|||+|+++|+..+|.+|..|++++.++++|.+..+++
T Consensus 163 ~~~a~~va~~l~---~~~avLL~nHGvi~~G~~l~eA~~~~~~LE~~A~i~l~a~~~G~~~~l~~ 224 (260)
T PRK07090 163 NEEGEIISAALG---DKRAILLSHHGQLVAGKSIEEACVLALLIERAARLQLLAMAAGPIKPIPP 224 (260)
T ss_pred hHHHHHHHHHhc---cCCEEEECCCCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCH
Confidence 356888999997 45799999999999999999999999999999999999999997766654
No 145
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.71 E-value=3.9e-08 Score=102.99 Aligned_cols=105 Identities=14% Similarity=0.101 Sum_probs=77.7
Q ss_pred cccCCCHHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 258 GEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G-~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
.+++||+.++|+.|+++| ++++|+||.+...++.+++++++ .+++.. . .+++++ .++++++.. +++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi---~~~f~~----~-~p~~K~----~~v~~l~~~-~~~ 449 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI---DEVHAE----L-LPEDKL----AIVKELQEE-GGV 449 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCC---Ceeecc----C-CHHHHH----HHHHHHHHc-CCE
Confidence 479999999999999999 99999999999999999999954 333333 1 112223 355555556 889
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN 378 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~ 378 (383)
|+||||+.+|+.++++|| +++.++...+.....+|+++.
T Consensus 450 v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~Ad~vi~ 488 (556)
T TIGR01525 450 VAMVGDGINDAPALAAAD---VGIAMGAGSDVAIEAADIVLL 488 (556)
T ss_pred EEEEECChhHHHHHhhCC---EeEEeCCCCHHHHHhCCEEEe
Confidence 999999999999999999 566665222212223477776
No 146
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.66 E-value=6.4e-08 Score=103.57 Aligned_cols=66 Identities=26% Similarity=0.349 Sum_probs=58.9
Q ss_pred EeeecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016771 31 VPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 99 (383)
Q Consensus 31 ipv~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~ 99 (383)
||...+. .+|++.+.++++++|+..|+||+|||+++||+|+++|+.++|.+|..++.++.++.+|.
T Consensus 147 vpy~~pG---~~La~~~~~~~~~~~~~~~vll~~HGl~~~G~~~~eA~~~~~~~e~~a~~~~~~~~~g~ 212 (676)
T TIGR02632 147 VPWRRPG---FQLGLDIAAQVDANPQAKGVVLEGHGLVVWGDTAKECYERTLSIINEAEQFIEEKRGGE 212 (676)
T ss_pred eccccCC---hHHHHHHHHHHHhCCCCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 4544443 47999999999988888999999999999999999999999999999999999998875
No 147
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.61 E-value=8e-08 Score=100.71 Aligned_cols=105 Identities=10% Similarity=0.061 Sum_probs=76.4
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
..+++||+.++|++|+++|++++++|+.+....+.+.+++++. ++.. .+|++. ..++++++.+ +++
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----~~~~-------~~p~~K--~~~v~~l~~~-~~~ 468 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN----VRAE-------VLPDDK--AALIKELQEK-GRV 468 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc----EEcc-------CChHHH--HHHHHHHHHc-CCE
Confidence 3478999999999999999999999999999999999999552 2222 223222 3444555556 889
Q ss_pred EEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeC
Q 016771 337 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN 378 (383)
Q Consensus 337 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~ 378 (383)
|+||||+.+|+.++++||+ ++.++...+.....+|+++.
T Consensus 469 v~~VGDg~nD~~al~~A~v---gia~g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 469 VAMVGDGINDAPALAQADV---GIAIGAGTDVAIEAADVVLM 507 (562)
T ss_pred EEEEeCCCccHHHHhhCCE---EEEeCCcCHHHHhhCCEEEe
Confidence 9999999999999999996 34444222222233477773
No 148
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.59 E-value=3.3e-08 Score=87.05 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=78.3
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCC-ccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD-LRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~-l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
....||+.++|+.|.+. |.++|.|++++.+++.++++++..+ ++. .+.. +.....+|. |.+.++.+|.+ ++
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r--~~~~~~~~~---~~K~L~~l~~~-~~ 113 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYR--ESCVFTNGK---YVKDLSLVGKD-LS 113 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEc--cccEEeCCC---EEeEchhcCCC-hh
Confidence 46889999999999987 9999999999999999999996433 433 2222 333334554 77888899997 99
Q ss_pred cEEEEecCHHhHHHHHHcCCcEEEEe
Q 016771 336 EILFVTDVYQEATAAKAAGLEVVISI 361 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~aG~~~i~v~ 361 (383)
+|++|||++.++.++.++|+.+....
T Consensus 114 ~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 114 KVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred hEEEEeCChhhhccCccCEeecCCCC
Confidence 99999999999999999999876554
No 149
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.58 E-value=4.5e-07 Score=83.72 Aligned_cols=80 Identities=18% Similarity=0.224 Sum_probs=54.9
Q ss_pred eEEEEcCCcHHHHHHHHhhcCCCCcccceee-eeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCC
Q 016771 277 KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG-FFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 355 (383)
Q Consensus 277 ~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~-~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~ 355 (383)
.+.+.++.........+++.+. .+.-+.+. .++.......++..+..+++.+|++ ++++++|||+.+|+..++.+|+
T Consensus 117 ~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~ 194 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEELGL-DLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVAGF 194 (230)
T ss_pred eeeecccccHHHHHHHHHHcCC-cEEEEecceEEEEeeCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhcCc
Confidence 3455666666666666766521 11111111 1122334455788999999999998 9999999999999999999999
Q ss_pred cEE
Q 016771 356 EVV 358 (383)
Q Consensus 356 ~~i 358 (383)
.++
T Consensus 195 ~va 197 (230)
T PRK01158 195 GVA 197 (230)
T ss_pred eEE
Confidence 754
No 150
>PRK08324 short chain dehydrogenase; Validated
Probab=98.54 E-value=2.3e-07 Score=99.50 Aligned_cols=67 Identities=22% Similarity=0.298 Sum_probs=59.2
Q ss_pred EeeecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhc
Q 016771 31 VPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 97 (383)
Q Consensus 31 ipv~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~ 97 (383)
||+.+...-..+|++.+.+.++++|+..++|++|||++|||+|+++|+.+++.+|..|+.++.+++.
T Consensus 156 v~~~py~~pg~~l~~~~~~~~~~~~~~~~~lL~nHG~~~~G~~~~eA~~~~~~~e~~a~~~~~a~~~ 222 (681)
T PRK08324 156 VGWVPYVRPGFDLALAIAEAVRANPGAEGVVLGKHGLFTWGDTAKEAYERTIEIITRAEEYIEARGA 222 (681)
T ss_pred eEEcCccCCChHHHHHHHHHHHhCCCCcEEEECCCCCeeccCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5555544444579999999999888899999999999999999999999999999999999999887
No 151
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.49 E-value=1.8e-06 Score=82.29 Aligned_cols=89 Identities=12% Similarity=0.013 Sum_probs=56.2
Q ss_pred HHHHHhCCCeEEEE---cCCcHHHHHHHHhhcCCCCcccceeeeecc-CCCCCCCHHHHHHHHHHcCCCCC-CcEEEEec
Q 016771 268 LEKWHSLGTKVYIY---SSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-AVGNKRETPSYVEITNSLGVDKP-SEILFVTD 342 (383)
Q Consensus 268 L~~L~~~G~~l~Iv---Tn~~~~~~~~~l~~~~~~~l~~~v~~~~d~-~~~~KP~p~~~~~~~~~l~v~~p-~e~l~VGD 342 (383)
++.++..++...++ ++.........++.. ++.-..+.++.. .... .+......+++.+|++ + ++|++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~i~-~~~~v~~~GD 215 (273)
T PRK00192 141 ARLAKDREFSEPFLWNGSEAAKERFEEALKRL---GLKVTRGGRFLHLLGGG-DKGKAVRWLKELYRRQ-DGVETIALGD 215 (273)
T ss_pred HHHHHhcccCCceeecCchHHHHHHHHHHHHc---CCEEEECCeEEEEeCCC-CHHHHHHHHHHHHhcc-CCceEEEEcC
Confidence 34455555655555 443344444555544 332111122222 2223 4566788999999998 9 99999999
Q ss_pred CHHhHHHHHHcCCcEEEEe
Q 016771 343 VYQEATAAKAAGLEVVISI 361 (383)
Q Consensus 343 s~~Di~aA~~aG~~~i~v~ 361 (383)
+.+|+..++.+|+.++.-+
T Consensus 216 s~NDi~m~~~ag~~vam~N 234 (273)
T PRK00192 216 SPNDLPMLEAADIAVVVPG 234 (273)
T ss_pred ChhhHHHHHhCCeeEEeCC
Confidence 9999999999998765433
No 152
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.45 E-value=6e-07 Score=85.30 Aligned_cols=57 Identities=12% Similarity=0.135 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccce-eeeeccCCCCCCCHH
Q 016771 262 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFFDTAVGNKRETP 320 (383)
Q Consensus 262 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v-~~~~d~~~~~KP~p~ 320 (383)
||+.++|++|+++|++++|+||+++..+...++.+|+..+|+.+ ++ +.....||+|+
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~--Gdv~~~kp~~e 206 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISG--GHKAEEYSTMS 206 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEEC--CccccCCCCcc
Confidence 78999999999999999999999999999999999877776533 33 33445566553
No 153
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.39 E-value=6.4e-06 Score=72.42 Aligned_cols=91 Identities=16% Similarity=0.082 Sum_probs=64.2
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeee----------------cc--CCCCCCCH
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----------------DT--AVGNKRET 319 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~----------------d~--~~~~KP~p 319 (383)
+.+-||.+++++..++++++.+|+|++-...++.+++++.-..-...+.-++ ++ .+..||
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~-- 149 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKS-- 149 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcc--
Confidence 5788999999999999999999999999999999999874111111111111 11 112243
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCC
Q 016771 320 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 355 (383)
Q Consensus 320 ~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~ 355 (383)
. ....+.-. ++.++|.|||..|+.||+..-.
T Consensus 150 ~----vI~~l~e~-~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 150 S----VIHELSEP-NESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred h----hHHHhhcC-CceEEEecCCcccccHhhhhhh
Confidence 2 23344444 8889999999999999998765
No 154
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=98.38 E-value=5.1e-07 Score=88.18 Aligned_cols=70 Identities=17% Similarity=0.082 Sum_probs=55.3
Q ss_pred CCCCCHHHHHHHHHHc--------CCC----CCCcEEEEecCH-HhHHHHHHcCCcEEEEeCC-CCCCCC--CCCCCeee
Q 016771 314 GNKRETPSYVEITNSL--------GVD----KPSEILFVTDVY-QEATAAKAAGLEVVISIRP-GNGPLP--ENHGFKTI 377 (383)
Q Consensus 314 ~~KP~p~~~~~~~~~l--------~v~----~p~e~l~VGDs~-~Di~aA~~aG~~~i~v~~~-~~~~~~--~~~~d~vI 377 (383)
..||+|.+|..+++.+ +++ ++++++||||++ .||.+|+++||.+++|.+| ....+. ...+++++
T Consensus 231 ~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv 310 (321)
T TIGR01456 231 LGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIV 310 (321)
T ss_pred cCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEE
Confidence 4899999999998887 432 157999999999 9999999999999999987 222221 12348999
Q ss_pred CCccCC
Q 016771 378 NSFAEI 383 (383)
Q Consensus 378 ~sl~eL 383 (383)
+|+.|+
T Consensus 311 ~~l~e~ 316 (321)
T TIGR01456 311 NDVFDA 316 (321)
T ss_pred CCHHHH
Confidence 998764
No 155
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.36 E-value=3.5e-06 Score=77.43 Aligned_cols=79 Identities=16% Similarity=0.153 Sum_probs=54.9
Q ss_pred eEEEEcCCcHHHHHHHHhhcCCCCccccee-e-eeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcC
Q 016771 277 KVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-G-FFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAG 354 (383)
Q Consensus 277 ~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~-~-~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG 354 (383)
...+.+..+.+.....++.++.. +. .++ . .++.......+...+..+++++|++ ++++++|||+.+|+..++.+|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag 185 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKELGLN-LV-AVDSGFDIHILPQGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVPG 185 (225)
T ss_pred eEEEeecCCHHHHHHHHHhcCce-EE-EecCCcEEEEeeCCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhcC
Confidence 34455555666666677766321 11 111 1 1222334566778899999999998 999999999999999999999
Q ss_pred CcEE
Q 016771 355 LEVV 358 (383)
Q Consensus 355 ~~~i 358 (383)
+.++
T Consensus 186 ~~va 189 (225)
T TIGR01482 186 FGVA 189 (225)
T ss_pred ceEE
Confidence 9644
No 156
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.32 E-value=1.3e-06 Score=95.79 Aligned_cols=85 Identities=16% Similarity=0.229 Sum_probs=72.0
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcE
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 337 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~ 337 (383)
.+++||+.+.|+.|+++|++++++|+.+....+.+.++++ +.+++.+ ..| +--..++++++.. +++|
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lg---i~~~~~~-------~~p--~~K~~~i~~l~~~-~~~v 715 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG---IDEVIAG-------VLP--DGKAEAIKRLQSQ-GRQV 715 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC---CCEEEeC-------CCH--HHHHHHHHHHhhc-CCEE
Confidence 4789999999999999999999999999999999999994 4444443 122 3345678888887 8999
Q ss_pred EEEecCHHhHHHHHHcCC
Q 016771 338 LFVTDVYQEATAAKAAGL 355 (383)
Q Consensus 338 l~VGDs~~Di~aA~~aG~ 355 (383)
+||||+.+|+.++++||+
T Consensus 716 ~~vGDg~nD~~al~~Agv 733 (834)
T PRK10671 716 AMVGDGINDAPALAQADV 733 (834)
T ss_pred EEEeCCHHHHHHHHhCCe
Confidence 999999999999999999
No 157
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.32 E-value=1.4e-06 Score=82.34 Aligned_cols=118 Identities=12% Similarity=0.139 Sum_probs=77.1
Q ss_pred CCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeee-----ccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 261 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-----DTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 261 ~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~-----d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
|+....++..|++-++ +.++||.+...- ......+.+-..++..+. +.....||++.++..+.++++++ |+
T Consensus 167 y~KL~kA~~yLqnP~c-lflatn~D~~~p--~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~-ps 242 (306)
T KOG2882|consen 167 YPKLMKALNYLQNPGC-LFLATNRDATTP--PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNID-PS 242 (306)
T ss_pred HHHHHHHHHHhCCCCc-EEEeccCccccC--CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCC-cc
Confidence 3455667777776665 778888754221 001110111111111100 12345799999999999999999 99
Q ss_pred cEEEEecCH-HhHHHHHHcCCcEEEEeCCCCCCC--------CCCCCCeeeCCccC
Q 016771 336 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPL--------PENHGFKTINSFAE 382 (383)
Q Consensus 336 e~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~--------~~~~~d~vI~sl~e 382 (383)
+|+||||+. .||.-++++|+++++|-.|.+..+ ....+||+++++.+
T Consensus 243 Rt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d 298 (306)
T KOG2882|consen 243 RTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGD 298 (306)
T ss_pred eEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHH
Confidence 999999999 899999999999999998854321 11123777776654
No 158
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.31 E-value=1.4e-06 Score=72.30 Aligned_cols=78 Identities=17% Similarity=0.174 Sum_probs=58.3
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHH---HHHHH------
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYV---EITNS------ 328 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~---~~~~~------ 328 (383)
..+||+++++|+.++.+|+-++.+|=+.....-..|+.+++..+|+++- -+|+|.-++ +++++
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~V--------iePhP~K~~ML~~llr~i~~er~ 111 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIV--------IEPHPYKFLMLSQLLREINTERN 111 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEE--------ecCCChhHHHHHHHHHHHHHhhc
Confidence 4799999999999999999999999888888778888885444444333 245554333 33433
Q ss_pred cCCCCCCcEEEEecCH
Q 016771 329 LGVDKPSEILFVTDVY 344 (383)
Q Consensus 329 l~v~~p~e~l~VGDs~ 344 (383)
..++ |++++|++|..
T Consensus 112 ~~ik-P~~Ivy~DDR~ 126 (164)
T COG4996 112 QKIK-PSEIVYLDDRR 126 (164)
T ss_pred cccC-cceEEEEeccc
Confidence 3466 99999999986
No 159
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.30 E-value=3.9e-06 Score=79.88 Aligned_cols=82 Identities=16% Similarity=0.123 Sum_probs=60.6
Q ss_pred CCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccC-----------------------------
Q 016771 262 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTA----------------------------- 312 (383)
Q Consensus 262 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~----------------------------- 312 (383)
|++.++|++|+++|++++|+||+++..+...++.+++.++|+.+.+- +..
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~-g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~ 229 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICG-GRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTD 229 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEEC-CCcccccccceeecccceeEEecCceeEeCCc
Confidence 78899999999999999999999999999999999887776522220 110
Q ss_pred CCC-CCCHHHHHHHHHHcCCCCCCcEEEEecCH
Q 016771 313 VGN-KRETPSYVEITNSLGVDKPSEILFVTDVY 344 (383)
Q Consensus 313 ~~~-KP~p~~~~~~~~~l~v~~p~e~l~VGDs~ 344 (383)
... -.+|...+..+++.|+.-.+.+-.|+|=.
T Consensus 230 ~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 230 VKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred ccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 001 12577888888888887446667777755
No 160
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.21 E-value=4e-06 Score=69.73 Aligned_cols=113 Identities=15% Similarity=0.196 Sum_probs=88.7
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcE
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 337 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~ 337 (383)
.++|+.+.+.|+.|++. +.++|+|......+....+..|+. ....+ .-.+|+.-..+++.++-. -+.|
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~-~~rv~---------a~a~~e~K~~ii~eLkk~-~~k~ 96 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP-VERVF---------AGADPEMKAKIIRELKKR-YEKV 96 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc-eeeee---------cccCHHHHHHHHHHhcCC-CcEE
Confidence 37999999999999999 999999999888888888877421 11122 234667778889998875 7999
Q ss_pred EEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccC
Q 016771 338 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 382 (383)
Q Consensus 338 l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~e 382 (383)
+||||..+|+.+-++|-+..+-+..++-+..+...+|+++.+..|
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e 141 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAE 141 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHH
Confidence 999999999999999998877777655554444456888877654
No 161
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.20 E-value=2.8e-06 Score=76.61 Aligned_cols=101 Identities=19% Similarity=0.255 Sum_probs=60.3
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHH-------HHHHHHhhcCCCCcc--cceeeeeccCCCCCCCHHHHHHHHH
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRL-------AQRLIFGNSNYGDLR--KYLSGFFDTAVGNKRETPSYVEITN 327 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~-------~~~~~l~~~~~~~l~--~~v~~~~d~~~~~KP~p~~~~~~~~ 327 (383)
..+|.||+.++|++|.+.|+.+.++|+.+.. .....+++. .++++ .++.. ..|-
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~h-f~~i~~~~~~~~------~~K~---------- 133 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERH-FPFIPYDNLIFT------GDKT---------- 133 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHH-HTHHHHCCEEEE------SSGG----------
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHH-cCCCchheEEEe------cCCC----------
Confidence 4589999999999999999888888777533 344555544 11111 11111 1231
Q ss_pred HcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccC
Q 016771 328 SLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 382 (383)
Q Consensus 328 ~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~e 382 (383)
. +. .+ ++|+|++..+..+.+.|+++|+...+.|.... ....++|..|
T Consensus 134 ~--v~-~D--vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~e 180 (191)
T PF06941_consen 134 L--VG-GD--VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEE 180 (191)
T ss_dssp G--C---S--EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTS
T ss_pred e--Ee-cc--EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHH
Confidence 1 22 22 89999999999999999999999988666443 3466766665
No 162
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.20 E-value=2.2e-05 Score=71.11 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=70.1
Q ss_pred ccccCCCHHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHhhcCCCCccc-cee--eeeccC-----------CCCCCCH--
Q 016771 257 EGEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRK-YLS--GFFDTA-----------VGNKRET-- 319 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~-~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~--~~~d~~-----------~~~KP~p-- 319 (383)
.++.-||+.++++.+++.|. .+.|+|..+...++.+|+++++.++|. +++ +.+|.. ..++--|
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 35889999999999999985 999999999999999999996655553 221 111110 0111111
Q ss_pred ----HHHHHH-H--HHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeC
Q 016771 320 ----PSYVEI-T--NSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 362 (383)
Q Consensus 320 ----~~~~~~-~--~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~ 362 (383)
.....+ + .+-|+. -++.+||||+.+|+-+-...--.-++..|
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~-yer~iYvGDG~nD~CP~l~Lr~~D~ampR 210 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVR-YERLIYVGDGANDFCPVLRLRACDVAMPR 210 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCc-eeeEEEEcCCCCCcCcchhcccCceeccc
Confidence 112222 1 233666 78999999999999887776554444443
No 163
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.18 E-value=3.8e-06 Score=92.61 Aligned_cols=118 Identities=17% Similarity=0.121 Sum_probs=88.1
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeecc----------------CCCCCCCHHH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDT----------------AVGNKRETPS 321 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~----------------~~~~KP~p~~ 321 (383)
+++||+.++++.|+++|+++.++|+.+......+.+.+|+..... .+++ +. .......|+-
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g--~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSG--EKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEh--HHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 789999999999999999999999999999999999996543221 2222 11 1224467777
Q ss_pred HHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCC-CCCCeee--CCccC
Q 016771 322 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPE-NHGFKTI--NSFAE 382 (383)
Q Consensus 322 ~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~-~~~d~vI--~sl~e 382 (383)
-..+.+.++-. .+.|.||||+.+|+.|.++|++ ++..|.+..+.. ..+|+++ ++|..
T Consensus 606 K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdV---Gia~g~~g~~va~~aaDivl~dd~~~~ 665 (884)
T TIGR01522 606 KMKIVKALQKR-GDVVAMTGDGVNDAPALKLADI---GVAMGQTGTDVAKEAADMILTDDDFAT 665 (884)
T ss_pred HHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCe---eEecCCCcCHHHHHhcCEEEcCCCHHH
Confidence 78888888876 8899999999999999999995 555552222222 3458887 44543
No 164
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.16 E-value=1.5e-05 Score=73.01 Aligned_cols=96 Identities=14% Similarity=0.124 Sum_probs=61.6
Q ss_pred eEEEEcCCcHHHHHHHHhhcCCCCcccceee-eeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCC
Q 016771 277 KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG-FFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 355 (383)
Q Consensus 277 ~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~-~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~ 355 (383)
.+.+.++.........++.. ++..+.++ .++.......+...++.+++.+|++ ++++++|||+.+|+...+.+|+
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~~ml~~ag~ 184 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKER---GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDIDLFRVVGF 184 (215)
T ss_pred EEEecCCccHHHHHHHHHhC---CeEEEecCceEEEecCCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCC
Confidence 44556666666677677765 33222222 1122223345567899999999998 9999999999999999999998
Q ss_pred cEEEEeCCCCCCCCCCCCCeeeCC
Q 016771 356 EVVISIRPGNGPLPENHGFKTINS 379 (383)
Q Consensus 356 ~~i~v~~~~~~~~~~~~~d~vI~s 379 (383)
.++. .++ .+.....++++..+
T Consensus 185 ~vam-~na--~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 185 KVAV-ANA--DDQLKEIADYVTSN 205 (215)
T ss_pred eEEc-CCc--cHHHHHhCCEEcCC
Confidence 7554 322 22223334566543
No 165
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.02 E-value=5.2e-05 Score=70.20 Aligned_cols=102 Identities=13% Similarity=0.077 Sum_probs=61.7
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHH-HcCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITN-SLGVD 332 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~---~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~-~l~v~ 332 (383)
..++.|++.++++.|+++|++++++|+.+... +...|...|..++...+-. ......| +...|+.-.+ ++--.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR--~~~d~~~-~~~~yKs~~R~~l~~~ 194 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILR--GLEDSNK-TVVTYKSEVRKSLMEE 194 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeec--CCCCCCc-hHhHHHHHHHHHHHhC
Confidence 34799999999999999999999999998665 5566667754433222222 1111223 2223332222 22111
Q ss_pred CCCcEEEEecCHHhHHHHHHcCCcEEEEeC
Q 016771 333 KPSEILFVTDVYQEATAAKAAGLEVVISIR 362 (383)
Q Consensus 333 ~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~ 362 (383)
--.=+..|||...|+.+. .+|.++.-+.+
T Consensus 195 GYrIv~~iGDq~sDl~G~-~~~~RtFKLPN 223 (229)
T TIGR01675 195 GYRIWGNIGDQWSDLLGS-PPGRRTFKLPN 223 (229)
T ss_pred CceEEEEECCChHHhcCC-CccCceeeCCC
Confidence 022467899999999653 45666655443
No 166
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.99 E-value=5.2e-05 Score=70.53 Aligned_cols=99 Identities=14% Similarity=0.084 Sum_probs=61.4
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHhhcCCCCcccce-eeeeccCCCC---CCCHHHHHHHHHHcCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYL-SGFFDTAVGN---KRETPSYVEITNSLGV 331 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~---~~~~~~~l~~~~~~~l~~~v-~~~~d~~~~~---KP~p~~~~~~~~~l~v 331 (383)
++.||+.++++.++++|++|+++||.+ +..+..-|+..|..+....+ .+ +..... +....--+..+++-|.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~--~~~~~~~~~~~yK~~~r~~i~~~Gy 192 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRP--DKDPSKKSAVEYKSERRKEIEKKGY 192 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEE--ESSTSS------SHHHHHHHHHTTE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhcccc--ccccccccccccchHHHHHHHHcCC
Confidence 789999999999999999999999986 44566667777544433333 22 111011 1111222333333344
Q ss_pred CCCCcEEEEecCHHhHHHHHHc---CCcEEEEeC
Q 016771 332 DKPSEILFVTDVYQEATAAKAA---GLEVVISIR 362 (383)
Q Consensus 332 ~~p~e~l~VGDs~~Di~aA~~a---G~~~i~v~~ 362 (383)
. =+++|||...|+..++.+ |-+++.+.+
T Consensus 193 ~---Ii~~iGD~~~D~~~~~~~~~~~~r~f~lPN 223 (229)
T PF03767_consen 193 R---IIANIGDQLSDFSGAKTAGARAERWFKLPN 223 (229)
T ss_dssp E---EEEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred c---EEEEeCCCHHHhhcccccccccceEEEcCC
Confidence 3 488999999999995544 345555444
No 167
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.94 E-value=6e-05 Score=66.01 Aligned_cols=96 Identities=11% Similarity=0.126 Sum_probs=56.5
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHH---HHHHhhc---CCCCcc--cceee---ee----ccCCCCCC---CHHH
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQ---RLIFGNS---NYGDLR--KYLSG---FF----DTAVGNKR---ETPS 321 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~---~~~l~~~---~~~~l~--~~v~~---~~----d~~~~~KP---~p~~ 321 (383)
..|++.+++++++++|+++.++|+.+.... +..+..+ +. ++. +++.. .+ ......+| +.+.
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~-~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~ 106 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGH-NLPHGPVLLSPDRLFAALHREVISKKPEVFKIAC 106 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccc-cCCCceEEEcCCcchhhhhcccccCCHHHHHHHH
Confidence 458999999999999999999999987665 3566552 10 222 22221 00 00112233 2233
Q ss_pred HHHHHHHcCCCCCCcE-EEEecCHHhHHHHHHcCCcE
Q 016771 322 YVEITNSLGVDKPSEI-LFVTDVYQEATAAKAAGLEV 357 (383)
Q Consensus 322 ~~~~~~~l~v~~p~e~-l~VGDs~~Di~aA~~aG~~~ 357 (383)
...+.+.+.-. -... +-+||+.+|+.+=+++|+..
T Consensus 107 l~~i~~~~~~~-~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 107 LRDIKSLFPPQ-GNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHhcCCC-CCCEEEEeCCCchhHHHHHHcCCCh
Confidence 33444333211 1223 34677789999999999953
No 168
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.89 E-value=2e-05 Score=85.31 Aligned_cols=84 Identities=20% Similarity=0.224 Sum_probs=66.2
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcE
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 337 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~ 337 (383)
.+++||+.++|+.|+++|++++++|+.+....+.+.+.+|+. +. +. ..| +-=..++++++ . ++.|
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~----~~---~~----~~p--~~K~~~v~~l~-~-~~~v 631 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID----FR---AG----LLP--EDKVKAVTELN-Q-HAPL 631 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----ee---cC----CCH--HHHHHHHHHHh-c-CCCE
Confidence 489999999999999999999999999999999999999552 11 11 122 11223555565 3 5789
Q ss_pred EEEecCHHhHHHHHHcCCc
Q 016771 338 LFVTDVYQEATAAKAAGLE 356 (383)
Q Consensus 338 l~VGDs~~Di~aA~~aG~~ 356 (383)
+||||+.+|..+.++|++.
T Consensus 632 ~mvGDgiNDapAl~~A~vg 650 (741)
T PRK11033 632 AMVGDGINDAPAMKAASIG 650 (741)
T ss_pred EEEECCHHhHHHHHhCCee
Confidence 9999999999999999943
No 169
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.72 E-value=0.0002 Score=67.57 Aligned_cols=102 Identities=14% Similarity=0.190 Sum_probs=62.2
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHH-HH---Hc
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEI-TN---SL 329 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~---~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~-~~---~l 329 (383)
.+++.|++.++.+.++++|++++++||.+... +...|++.|..+....+-. +.....+.+.-.|+.. .+ +-
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR--~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILK--DPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeec--CCCCCccchhHHHHHHHHHHHHHc
Confidence 35789999999999999999999999998543 4445555543322222221 1111122233333322 12 22
Q ss_pred CCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 330 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 330 ~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
|.. =+..|||...|+.+....+.++.-+.++
T Consensus 221 GYr---Iv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 221 GYN---IVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred Cce---EEEEECCCHHhccCCCccCcceecCCCc
Confidence 332 5678999999997666334677777665
No 170
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.69 E-value=7.9e-05 Score=82.63 Aligned_cols=117 Identities=17% Similarity=0.188 Sum_probs=81.7
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcc-----cceeee-ec-------------cCCCCCCCH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-----KYLSGF-FD-------------TAVGNKRET 319 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~-----~~v~~~-~d-------------~~~~~KP~p 319 (383)
++.|++.++++.|+++|+++.++|+.+......+.+.+|+..-. ..+++- ++ .....+-.|
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P 616 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP 616 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence 78999999999999999999999999999999999999653210 122210 00 011233445
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCC
Q 016771 320 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 379 (383)
Q Consensus 320 ~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~s 379 (383)
+-=..+++.++-. .+.|.|+||+.+|+.+.++|++.. .+.. + .+.....+|+++.+
T Consensus 617 ~~K~~iV~~lq~~-g~~va~iGDG~ND~~alk~AdVGi-a~g~-g-~~~ak~aAD~vl~d 672 (917)
T TIGR01116 617 SHKSELVELLQEQ-GEIVAMTGDGVNDAPALKKADIGI-AMGS-G-TEVAKEASDMVLAD 672 (917)
T ss_pred HHHHHHHHHHHhc-CCeEEEecCCcchHHHHHhCCeeE-ECCC-C-cHHHHHhcCeEEcc
Confidence 5557777777766 789999999999999999999943 3322 2 12222345888765
No 171
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.67 E-value=0.00021 Score=62.67 Aligned_cols=94 Identities=16% Similarity=0.228 Sum_probs=62.3
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHH----HHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHH--HHHHcCCC
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR----LIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVE--ITNSLGVD 332 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~----~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~--~~~~l~v~ 332 (383)
|-.=+++++..-.++|-.++.+|..+...++ .+.+.+.+.+..+ .|. +.||+|.-|.+ .++..++
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~-------Gdk~k~~qy~Kt~~i~~~~~- 186 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFA-------GDKPKPGQYTKTQWIQDKNI- 186 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeec-------cCCCCcccccccHHHHhcCc-
Confidence 3344566777777889999999998754333 2334443322222 223 35776666654 4444444
Q ss_pred CCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCC
Q 016771 333 KPSEILFVTDVYQEATAAKAAGLEVVISIRPGN 365 (383)
Q Consensus 333 ~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 365 (383)
-++-|||.+||.||+.+|++.|-+.|-.|
T Consensus 187 ----~IhYGDSD~Di~AAkeaG~RgIRilRAaN 215 (237)
T COG3700 187 ----RIHYGDSDNDITAAKEAGARGIRILRAAN 215 (237)
T ss_pred ----eEEecCCchhhhHHHhcCccceeEEecCC
Confidence 47889999999999999999999887633
No 172
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.64 E-value=0.00021 Score=72.63 Aligned_cols=108 Identities=18% Similarity=0.214 Sum_probs=69.2
Q ss_pred ccccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcC---------CCCcccceee------eecc--------
Q 016771 255 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN---------YGDLRKYLSG------FFDT-------- 311 (383)
Q Consensus 255 ~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~---------~~~l~~~v~~------~~d~-------- 311 (383)
...+..-|.+..+|++|+++|.++.++||++...+...++.+- |.++|++|.. +|..
T Consensus 179 ~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd 258 (448)
T PF05761_consen 179 EKYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVD 258 (448)
T ss_dssp CCCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEE
T ss_pred HHHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEE
Confidence 3345567899999999999999999999999999998887662 4455552211 0100
Q ss_pred --CCC---C------CC----CHHHHHHHHHHcCCCCCCcEEEEecCH-HhHHHHHHc-CCcEEEEeCC
Q 016771 312 --AVG---N------KR----ETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAA-GLEVVISIRP 363 (383)
Q Consensus 312 --~~~---~------KP----~p~~~~~~~~~l~v~~p~e~l~VGDs~-~Di~aA~~a-G~~~i~v~~~ 363 (383)
... . ++ .-.......+-+|.. .++|+||||+. .||..+++. ||+|++|...
T Consensus 259 ~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~-g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 259 TETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWR-GKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp TTTSSEECS---SS--TC-EEEE--HHHHHHHCT---GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CCCCccccccccccccCCCEeecCCHHHHHHHHccC-CCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 000 0 00 113445667778888 89999999999 899988877 9999999764
No 173
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.51 E-value=0.00042 Score=65.42 Aligned_cols=44 Identities=18% Similarity=0.288 Sum_probs=38.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEE
Q 016771 315 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 359 (383)
Q Consensus 315 ~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~ 359 (383)
.--+......+++.+|++ +++++.|||+.+|+..=+.+|..++.
T Consensus 187 g~~K~~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~ag~gvam 230 (264)
T COG0561 187 GVSKGYALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEVAGLGVAM 230 (264)
T ss_pred CCchHHHHHHHHHHhCCC-HHHeEEeCCccccHHHHHhcCeeeec
Confidence 444567888999999998 99999999999999999999987654
No 174
>PLN02645 phosphoglycolate phosphatase
Probab=97.45 E-value=0.0013 Score=63.97 Aligned_cols=89 Identities=16% Similarity=0.199 Sum_probs=62.8
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~---~~~~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
.++||+.++|+.|+++|++++++||++.. .....++.+|+...++ +++. .......+++.+.. .
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts-----------~~~~~~~l~~~~~~-~ 111 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSS-----------SFAAAAYLKSINFP-K 111 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeeh-----------HHHHHHHHHhhccC-C
Confidence 47899999999999999999999999833 3333456664321111 1111 12444555666664 5
Q ss_pred CcEEEEecCHHhHHHHHHcCCcEEE
Q 016771 335 SEILFVTDVYQEATAAKAAGLEVVI 359 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG~~~i~ 359 (383)
.+.+||+++..+...++++|+.++.
T Consensus 112 ~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 112 DKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred CCEEEEEcCHHHHHHHHHCCCEEec
Confidence 5678999999999999999998765
No 175
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.27 E-value=0.00079 Score=58.89 Aligned_cols=80 Identities=15% Similarity=0.093 Sum_probs=58.1
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCC-cc-cc-eeeeeccCCCCCCCHHHHHHHH-HHcCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD-LR-KY-LSGFFDTAVGNKRETPSYVEIT-NSLGVD 332 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~-l~-~~-v~~~~d~~~~~KP~p~~~~~~~-~~l~v~ 332 (383)
.+.++||+.++|+.|++. |+++|+||+++..+..+++.++..+ +| .. ++. +... .+ +.+-+ .-++.+
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~r--d~~~--~~----~~KdL~~i~~~d 126 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISR--DESG--SP----HTKSLLRLFPAD 126 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEe--ccCC--CC----ccccHHHHcCCC
Confidence 457999999999999965 9999999999999999999996543 44 32 332 3221 11 12223 335776
Q ss_pred CCCcEEEEecCHHh
Q 016771 333 KPSEILFVTDVYQE 346 (383)
Q Consensus 333 ~p~e~l~VGDs~~D 346 (383)
.+.+++|+|++.-
T Consensus 127 -~~~vvivDd~~~~ 139 (156)
T TIGR02250 127 -ESMVVIIDDREDV 139 (156)
T ss_pred -cccEEEEeCCHHH
Confidence 8999999999843
No 176
>COG3347 Uncharacterized conserved protein [Function unknown]
Probab=97.23 E-value=0.0013 Score=64.16 Aligned_cols=61 Identities=21% Similarity=0.362 Sum_probs=44.7
Q ss_pred EeeecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHH
Q 016771 31 VPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL 94 (383)
Q Consensus 31 ipv~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~ 94 (383)
||=+.... .|+..+.+.++++|++.++++.|||+++||+|-.+|+...-.+==.++-+++.
T Consensus 160 vPYvrPGf---~La~~iae~~~~~p~~~glvL~~HGL~t~gdtak~~Ye~~I~~V~~Ae~~l~~ 220 (404)
T COG3347 160 VPYVRPGF---PLAKAIAERFKANPDAEGLVLENHGLFTFGDTAKEAYERMISIVNEAEEYLAR 220 (404)
T ss_pred EeccCCCc---hHHHHHHHHHhhCCCceEEEeccccceEecccHHHHHHHHHHHHHHHHHHHHh
Confidence 55444433 37788888999999999999999999999999999987643333333334433
No 177
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.10 E-value=0.014 Score=55.17 Aligned_cols=102 Identities=14% Similarity=0.232 Sum_probs=72.3
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCc--cc-------ce----------------eeeeccCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL--RK-------YL----------------SGFFDTAV 313 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l--~~-------~v----------------~~~~d~~~ 313 (383)
..-+++.++++.|+++|+++..+|..+.......++.+.-.++ .. ++ .|++- .
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf--t 158 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILF--T 158 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEE--e
Confidence 3557999999999999999999999987665554443321121 11 11 11110 1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHH----HHHHcCCcEEEEeCC
Q 016771 314 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEAT----AAKAAGLEVVISIRP 363 (383)
Q Consensus 314 ~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~----aA~~aG~~~i~v~~~ 363 (383)
..-++-..+..++.+.|.. |+.++||+|+...+. ++++.|+..+++...
T Consensus 159 ~~~~KG~~L~~fL~~~~~~-pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 159 GGQDKGEVLKYFLDKINQS-PKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT 211 (252)
T ss_pred CCCccHHHHHHHHHHcCCC-CCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence 2344568999999999998 999999999996654 346679999998875
No 178
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.02 E-value=0.0023 Score=68.24 Aligned_cols=87 Identities=14% Similarity=0.211 Sum_probs=69.4
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 338 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l 338 (383)
++.||+.+.+++|++.|+++.++|..+......+.+.+|+ .+++.. .+| +-=..+.+++.-. .+.+.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI---~~v~a~-------~~P--edK~~~v~~lq~~-g~~Va 512 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV---DDFIAE-------ATP--EDKIALIRQEQAE-GKLVA 512 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC---CEEEcC-------CCH--HHHHHHHHHHHHc-CCeEE
Confidence 7899999999999999999999999999999999999954 333332 333 3334455555444 66899
Q ss_pred EEecCHHhHHHHHHcCCcEE
Q 016771 339 FVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 339 ~VGDs~~Di~aA~~aG~~~i 358 (383)
|+||+.||..+-++|++...
T Consensus 513 mvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 513 MTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred EECCCcchHHHHHhCCEeEE
Confidence 99999999999999998654
No 179
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=96.96 E-value=0.0023 Score=60.47 Aligned_cols=33 Identities=24% Similarity=0.506 Sum_probs=27.2
Q ss_pred HHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 325 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 325 ~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
+++.+|++ +++++.|||+.||+..-+.+|...+
T Consensus 204 l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vA 236 (270)
T PRK10513 204 LAEHLGIK-PEEVMAIGDQENDIAMIEYAGVGVA 236 (270)
T ss_pred HHHHhCCC-HHHEEEECCchhhHHHHHhCCceEE
Confidence 34567787 8999999999999999999998544
No 180
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=96.96 E-value=0.0021 Score=61.03 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=28.0
Q ss_pred HHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeC
Q 016771 325 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 362 (383)
Q Consensus 325 ~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~ 362 (383)
+++.+|++ +++++.|||+.||+..=+.+|.. +.+.+
T Consensus 196 l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~-vAm~N 231 (272)
T PRK15126 196 LSQHLGLS-LADCMAFGDAMNDREMLGSVGRG-FIMGN 231 (272)
T ss_pred HHHHhCCC-HHHeEEecCCHHHHHHHHHcCCc-eeccC
Confidence 35566787 89999999999999999999974 44443
No 181
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.83 E-value=0.0033 Score=50.77 Aligned_cols=83 Identities=12% Similarity=0.066 Sum_probs=50.4
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcH---HHHHHHHhhcCCCCcc-cceeeeeccCCCCCCCHHHHHHHHHHcCCCCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSR---LAQRLIFGNSNYGDLR-KYLSGFFDTAVGNKRETPSYVEITNSLGVDKP 334 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~---~~~~~~l~~~~~~~l~-~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p 334 (383)
.++||+.++|+.|+++|.++.++||++. ......|+.+|+.--. ++++. .......+++. .. .
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts-----------~~~~~~~l~~~-~~-~ 80 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITS-----------GMAAAEYLKEH-KG-G 80 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEH-----------HHHHHHHHHHH-TT-S
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEECh-----------HHHHHHHHHhc-CC-C
Confidence 6899999999999999999999999973 3444556777432100 12322 23334444442 22 5
Q ss_pred CcEEEEecCHHhHHHHHHcCC
Q 016771 335 SEILFVTDVYQEATAAKAAGL 355 (383)
Q Consensus 335 ~e~l~VGDs~~Di~aA~~aG~ 355 (383)
..+++||.. ......+++|+
T Consensus 81 ~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 81 KKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp SEEEEES-H-HHHHHHHHTTE
T ss_pred CEEEEEcCH-HHHHHHHHcCC
Confidence 688888864 45555666664
No 182
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.83 E-value=0.0056 Score=65.45 Aligned_cols=86 Identities=12% Similarity=0.198 Sum_probs=70.1
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 338 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l 338 (383)
++.||+++.+++|++.|+++.++|..+......+-+.+|+ .+++.. .+ |+-=..+.+.++-. -+-+.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI---~~v~A~-------~~--PedK~~iV~~lQ~~-G~~Va 507 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV---DRFVAE-------CK--PEDKINVIREEQAK-GHIVA 507 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC---ceEEcC-------CC--HHHHHHHHHHHHhC-CCEEE
Confidence 7899999999999999999999999999999999999954 333332 33 45556666666655 56799
Q ss_pred EEecCHHhHHHHHHcCCcE
Q 016771 339 FVTDVYQEATAAKAAGLEV 357 (383)
Q Consensus 339 ~VGDs~~Di~aA~~aG~~~ 357 (383)
|+||..||..|=++|.+..
T Consensus 508 MtGDGvNDAPALa~ADVGI 526 (673)
T PRK14010 508 MTGDGTNDAPALAEANVGL 526 (673)
T ss_pred EECCChhhHHHHHhCCEEE
Confidence 9999999999999998753
No 183
>PRK10976 putative hydrolase; Provisional
Probab=96.77 E-value=0.0038 Score=58.93 Aligned_cols=33 Identities=18% Similarity=0.275 Sum_probs=28.0
Q ss_pred HHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 325 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 325 ~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
+++.+|++ +++++.|||+.||+..-+.+|...+
T Consensus 198 l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~~vA 230 (266)
T PRK10976 198 VAKKLGYS-LKDCIAFGDGMNDAEMLSMAGKGCI 230 (266)
T ss_pred HHHHcCCC-HHHeEEEcCCcccHHHHHHcCCCee
Confidence 34567887 9999999999999999999998644
No 184
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.75 E-value=0.0063 Score=65.09 Aligned_cols=87 Identities=14% Similarity=0.186 Sum_probs=69.9
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 338 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l 338 (383)
++.||+++.+++|++.|+++.++|..+....+.+-+.+|+ .+++.. .+ |+-=..+.++++-. -+-+.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI---d~v~A~-------~~--PedK~~iV~~lQ~~-G~~Va 511 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV---DDFLAE-------AT--PEDKLALIRQEQAE-GRLVA 511 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC---cEEEcc-------CC--HHHHHHHHHHHHHc-CCeEE
Confidence 7889999999999999999999999999999999999954 333332 23 44445666666655 56799
Q ss_pred EEecCHHhHHHHHHcCCcEE
Q 016771 339 FVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 339 ~VGDs~~Di~aA~~aG~~~i 358 (383)
|+||..||..|-++|.+...
T Consensus 512 MtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 512 MTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred EECCCcchHHHHHhCCEeEE
Confidence 99999999999999987543
No 185
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.70 E-value=0.0056 Score=65.68 Aligned_cols=86 Identities=23% Similarity=0.259 Sum_probs=69.0
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcE
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 337 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~ 337 (383)
.++.|++.+.+++|+++|+++.++|..++...+.+-+.+ ++.+++.+ -+|+- -....+++.-. -..+
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l---GId~v~Ae-------llPed--K~~~V~~l~~~-g~~V 602 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL---GIDEVRAE-------LLPED--KAEIVRELQAE-GRKV 602 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---ChHhhecc-------CCcHH--HHHHHHHHHhc-CCEE
Confidence 378999999999999999999999999999999999999 54444444 34432 34555666644 5789
Q ss_pred EEEecCHHhHHHHHHcCCc
Q 016771 338 LFVTDVYQEATAAKAAGLE 356 (383)
Q Consensus 338 l~VGDs~~Di~aA~~aG~~ 356 (383)
.||||..||..|=.+|-+.
T Consensus 603 amVGDGINDAPALA~AdVG 621 (713)
T COG2217 603 AMVGDGINDAPALAAADVG 621 (713)
T ss_pred EEEeCCchhHHHHhhcCee
Confidence 9999999999988888764
No 186
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.69 E-value=0.091 Score=55.93 Aligned_cols=51 Identities=8% Similarity=0.088 Sum_probs=40.3
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEE--ecCHHhHHHHHHcCCcEEEEeCC-CCCCC
Q 016771 316 KRETPSYVEITNSLGVDKPSEILFV--TDVYQEATAAKAAGLEVVISIRP-GNGPL 368 (383)
Q Consensus 316 KP~p~~~~~~~~~l~v~~p~e~l~V--GDs~~Di~aA~~aG~~~i~v~~~-~~~~~ 368 (383)
-.+-...+.+++.++++ .++++.| ||+.||+..=+.+|..++. ..+ +..+.
T Consensus 612 vdKG~AL~~L~e~~gI~-~~eViafalGDs~NDisMLe~Ag~gVAM-~~~~~~~~~ 665 (694)
T PRK14502 612 NDKGKAIKILNELFRLN-FGNIHTFGLGDSENDYSMLETVDSPILV-QRPGNKWHK 665 (694)
T ss_pred CCHHHHHHHHHHHhCCC-ccceEEEEcCCcHhhHHHHHhCCceEEE-cCCCCCCCc
Confidence 34567788899999998 8999999 9999999999999996554 443 44433
No 187
>PTZ00174 phosphomannomutase; Provisional
Probab=96.67 E-value=0.0048 Score=57.89 Aligned_cols=20 Identities=20% Similarity=0.325 Sum_probs=16.8
Q ss_pred CCCCCeEEEecccCCCcccc
Q 016771 137 SGLFPRCIVLDIEGTTTPIS 156 (383)
Q Consensus 137 ~~~~ikaVlFDlDGTL~d~~ 156 (383)
|-|.+|.|+|||||||++..
T Consensus 1 ~~~~~klia~DlDGTLL~~~ 20 (247)
T PTZ00174 1 MEMKKTILLFDVDGTLTKPR 20 (247)
T ss_pred CCCCCeEEEEECcCCCcCCC
Confidence 34678999999999999763
No 188
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.66 E-value=0.0076 Score=55.18 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 318 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 318 ~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
++.....+++.+|++ +++|++|||+.+|+...+.+|..++
T Consensus 180 Kg~al~~l~~~lgi~-~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 180 KGKAANWLKATYNQP-DVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred HHHHHHHHHHHhCCC-CCcEEEECCCHHHHHHHHhCCceEE
Confidence 445689999999998 9999999999999999999998754
No 189
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.59 E-value=0.0054 Score=58.25 Aligned_cols=37 Identities=14% Similarity=0.022 Sum_probs=30.9
Q ss_pred HHHHHHHcCC---CCCCcEEEEecCHHhHHHHHHcCCcEEE
Q 016771 322 YVEITNSLGV---DKPSEILFVTDVYQEATAAKAAGLEVVI 359 (383)
Q Consensus 322 ~~~~~~~l~v---~~p~e~l~VGDs~~Di~aA~~aG~~~i~ 359 (383)
.+.+++.+|+ + +++++.|||+.||+..=+.+|..++.
T Consensus 192 l~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~ag~gvAM 231 (271)
T PRK03669 192 ANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDVMDYAVVV 231 (271)
T ss_pred HHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHhCCEEEEe
Confidence 4556677888 8 99999999999999999999975443
No 190
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=96.52 E-value=0.36 Score=50.04 Aligned_cols=91 Identities=12% Similarity=0.109 Sum_probs=53.2
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhh-cCCCCcc---------cceeeeeccCCCCCCCHHHHHHHHHHc
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDLR---------KYLSGFFDTAVGNKRETPSYVEITNSL 329 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~-~~~~~l~---------~~v~~~~d~~~~~KP~p~~~~~~~~~l 329 (383)
+.|.+.+ .++++|.+ +|+|.+++..++.+.+. +++..+- ..++|.+.....+. -.+-...+.+.+
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~-Ge~Kv~rl~~~~ 185 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLV-GDHKRDAVLKEF 185 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCc-cHHHHHHHHHHh
Confidence 5555444 44567754 99999999999999975 6544331 12223221100000 011223333556
Q ss_pred CCCCCCcEEEEecCHHhHHHHHHcCCcE
Q 016771 330 GVDKPSEILFVTDVYQEATAAKAAGLEV 357 (383)
Q Consensus 330 ~v~~p~e~l~VGDs~~Di~aA~~aG~~~ 357 (383)
+.+ ... +..|||.+|..--..++-..
T Consensus 186 g~~-~~~-~aYgDS~sD~plL~~a~e~y 211 (497)
T PLN02177 186 GDA-LPD-LGLGDRETDHDFMSICKEGY 211 (497)
T ss_pred CCC-Cce-EEEECCccHHHHHHhCCccE
Confidence 654 444 89999999999888887653
No 191
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=96.31 E-value=0.055 Score=47.33 Aligned_cols=90 Identities=20% Similarity=0.273 Sum_probs=59.5
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcc--c-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR--K-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~--~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
+-.++...|..|+++ .+++-+|.......+.-..-+....+. . .+.+ ...| ..+.+.++++
T Consensus 73 ~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g-----~h~K------V~~vrth~id---- 136 (194)
T COG5663 73 LAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWLFIQNIHYDHLEIVG-----LHHK------VEAVRTHNID---- 136 (194)
T ss_pred HHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhc-----cccc------chhhHhhccC----
Confidence 446888999999987 578888887665544333322111111 1 1111 1223 4567788887
Q ss_pred EEEEecCH-HhHHHHHHcCCcEEEEeCCCCC
Q 016771 337 ILFVTDVY-QEATAAKAAGLEVVISIRPGNG 366 (383)
Q Consensus 337 ~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~ 366 (383)
++++|+. +-.+.|+++|++++.++.+.+.
T Consensus 137 -lf~ed~~~na~~iAk~~~~~vilins~ynR 166 (194)
T COG5663 137 -LFFEDSHDNAGQIAKNAGIPVILINSPYNR 166 (194)
T ss_pred -ccccccCchHHHHHHhcCCcEEEecCcccc
Confidence 6889998 8899999999999999987443
No 192
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.28 E-value=0.01 Score=56.87 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=23.2
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCC
Q 016771 266 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 298 (383)
Q Consensus 266 e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~ 298 (383)
+.|++|+++|++++++|+.....+..+.+.+++
T Consensus 25 ~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 25 QALAALERRSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 456666777777777777777777777777644
No 193
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.27 E-value=0.019 Score=62.65 Aligned_cols=98 Identities=16% Similarity=0.114 Sum_probs=72.9
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceee-------------------ee-ccCCCCCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG-------------------FF-DTAVGNKR 317 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~-------------------~~-d~~~~~KP 317 (383)
.++.|++.++++.|+++|+++.++|..+....+.+.+.+|+.+ ..+++ .. +.....+-
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT--NIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 3899999999999999999999999999999999999996643 11111 00 00012233
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 318 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 318 ~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
.|+-=..+.+.++-. -+-+.|+||+.||..|=++|.+...
T Consensus 519 ~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdVGIA 558 (755)
T TIGR01647 519 FPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADVGIA 558 (755)
T ss_pred CHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCeeEE
Confidence 455556666666655 6789999999999999999988643
No 194
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.26 E-value=0.019 Score=63.57 Aligned_cols=98 Identities=14% Similarity=0.143 Sum_probs=71.9
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeee-c-------------cCCCCCCCHHHHHH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-D-------------TAVGNKRETPSYVE 324 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~-d-------------~~~~~KP~p~~~~~ 324 (383)
++.|++.+.+++|+++|+++.++|..+......+.+.+|+.. .+.+++-. + ......-.|+-=..
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~-~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA-NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 789999999999999999999999999999999999996531 12222200 0 00112234455555
Q ss_pred HHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 325 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 325 ~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
+.+.++-. -+.+.|+||+.||..|-++|.+...
T Consensus 594 iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIA 626 (867)
T TIGR01524 594 IIGLLKKA-GHTVGFLGDGINDAPALRKADVGIS 626 (867)
T ss_pred HHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEE
Confidence 66666554 5689999999999999999998744
No 195
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=96.26 E-value=0.0089 Score=56.02 Aligned_cols=51 Identities=14% Similarity=0.142 Sum_probs=45.4
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 312 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 312 ~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
....+++....+.+++.+|++ +++|++|||+.+|+...+.+|..++++.+.
T Consensus 162 ~~~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 162 LPQGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred EeCCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 345678889999999999998 999999999999999999988888888765
No 196
>PLN02887 hydrolase family protein
Probab=96.23 E-value=0.011 Score=62.23 Aligned_cols=50 Identities=24% Similarity=0.172 Sum_probs=34.4
Q ss_pred HHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCC
Q 016771 326 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 379 (383)
Q Consensus 326 ~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~s 379 (383)
++.+|++ +++++.|||+.||+..-+.+|.. |++.+... .....++++..+
T Consensus 516 ~e~lGI~-~eeviAFGDs~NDIeMLe~AG~g-VAMgNA~e--eVK~~Ad~VT~s 565 (580)
T PLN02887 516 LNHLGVS-PDEIMAIGDGENDIEMLQLASLG-VALSNGAE--KTKAVADVIGVS 565 (580)
T ss_pred HHHcCCC-HHHEEEEecchhhHHHHHHCCCE-EEeCCCCH--HHHHhCCEEeCC
Confidence 4566787 89999999999999999999985 44443321 222334666544
No 197
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.19 E-value=0.014 Score=54.13 Aligned_cols=34 Identities=29% Similarity=0.296 Sum_probs=22.4
Q ss_pred HHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcC
Q 016771 264 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 297 (383)
Q Consensus 264 v~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~ 297 (383)
+.++|++|+++|+++.++|+.+......+++.++
T Consensus 20 ~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg 53 (225)
T TIGR02461 20 AREALEELKDLGFPIVFVSSKTRAEQEYYREELG 53 (225)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence 3446666666777777777777666666666664
No 198
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.17 E-value=0.038 Score=48.23 Aligned_cols=97 Identities=14% Similarity=0.120 Sum_probs=59.0
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcH---HHHHHHHhhcCCC--Cccc---ceee--eecc--CCCCCCCHHHHHHH-H
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSR---LAQRLIFGNSNYG--DLRK---YLSG--FFDT--AVGNKRETPSYVEI-T 326 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~---~~~~~~l~~~~~~--~l~~---~v~~--~~d~--~~~~KP~p~~~~~~-~ 326 (383)
..||+.++...++++||++.-+|+.+. ..++.+|+...-+ .|.+ .++. .+.. ...-.++|+.|+.. +
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~~L 107 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFKIACL 107 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhccccccChHHHHHHHH
Confidence 347999999999999999999999973 3455566655111 2222 2221 0111 01224567777754 3
Q ss_pred HHc-CCCC-CCc--EEEEecCHHhHHHHHHcCCc
Q 016771 327 NSL-GVDK-PSE--ILFVTDVYQEATAAKAAGLE 356 (383)
Q Consensus 327 ~~l-~v~~-p~e--~l~VGDs~~Di~aA~~aG~~ 356 (383)
+.+ ..-+ ... ..-.|++..|+.+=+++|+.
T Consensus 108 ~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 108 RDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 333 1210 122 33467999999999999995
No 199
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.15 E-value=0.0069 Score=56.73 Aligned_cols=59 Identities=7% Similarity=-0.077 Sum_probs=47.4
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHc-------CCcEEEEeCCCCCCCCCCCCCeeeCCccC
Q 016771 319 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA-------GLEVVISIRPGNGPLPENHGFKTINSFAE 382 (383)
Q Consensus 319 p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~a-------G~~~i~v~~~~~~~~~~~~~d~vI~sl~e 382 (383)
...+..++++++.. +++++||||+.+|+.+++.+ |..++.|.++. ....+++++++..+
T Consensus 169 g~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~----~~~~A~~~~~~~~~ 234 (244)
T TIGR00685 169 GEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS----KKTVAKFHLTGPQQ 234 (244)
T ss_pred HHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC----cCCCceEeCCCHHH
Confidence 48899999999998 99999999999999999999 77788887442 12234778877665
No 200
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.05 E-value=0.026 Score=62.65 Aligned_cols=96 Identities=18% Similarity=0.173 Sum_probs=73.2
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeecc----------------CCCCCCCHHHH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT----------------AVGNKRETPSY 322 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~----------------~~~~KP~p~~~ 322 (383)
++.|++.++++.|+++|+++.++|..+......+.+.+|+.+ ..+++| .+ .....-.|+-=
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~-~~v~~G--~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA-GEVLIG--SDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-cCceeH--HHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 788999999999999999999999999999999999996631 113332 11 11223455656
Q ss_pred HHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 323 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 323 ~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
..+.+.+.-. -+-+.|+||+.||..|=++|.+...
T Consensus 627 ~~IV~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIA 661 (902)
T PRK10517 627 ERIVTLLKRE-GHVVGFMGDGINDAPALRAADIGIS 661 (902)
T ss_pred HHHHHHHHHC-CCEEEEECCCcchHHHHHhCCEEEE
Confidence 6666666655 6779999999999999999987643
No 201
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.04 E-value=0.026 Score=62.69 Aligned_cols=97 Identities=14% Similarity=0.140 Sum_probs=72.7
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeee-c-------------cCCCCCCCHHHHHH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-D-------------TAVGNKRETPSYVE 324 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~-d-------------~~~~~KP~p~~~~~ 324 (383)
++.|++.++++.|+++|+++.++|..+......+.+.+|+.+ ...+++-. + ......-.|+-=..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~-~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~ 628 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP-GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSR 628 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC-CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHH
Confidence 788999999999999999999999999999999999996631 11222200 0 01122335566666
Q ss_pred HHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcE
Q 016771 325 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 357 (383)
Q Consensus 325 ~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~ 357 (383)
+.+.+.-. -+-+.|+||+.||..|=++|.+..
T Consensus 629 iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGI 660 (903)
T PRK15122 629 VLKALQAN-GHTVGFLGDGINDAPALRDADVGI 660 (903)
T ss_pred HHHHHHhC-CCEEEEECCCchhHHHHHhCCEEE
Confidence 66766655 678999999999999999998863
No 202
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.90 E-value=0.032 Score=62.39 Aligned_cols=99 Identities=15% Similarity=0.043 Sum_probs=71.7
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcc-cceeeee--------------ccCCCCCCCHHHHH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF--------------DTAVGNKRETPSYV 323 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~-~~v~~~~--------------d~~~~~KP~p~~~~ 323 (383)
++.|++.++++.|+++|+++.++|..+...+..+-+.+|+..-. .++++-. +......-.|+-=.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~ 658 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQ 658 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHH
Confidence 78899999999999999999999999999999999999653210 1222200 00111233445555
Q ss_pred HHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 324 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 324 ~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
.+.+.+.-. -+-+.|+||+.||..|=++|.+...
T Consensus 659 ~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIA 692 (941)
T TIGR01517 659 LLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFS 692 (941)
T ss_pred HHHHHHHHC-CCEEEEECCCCchHHHHHhCCccee
Confidence 666666554 5689999999999999999987644
No 203
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=95.89 E-value=0.061 Score=51.16 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=30.7
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHhh
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGN 295 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~---~~~~l~~ 295 (383)
.++||+.++|++|+++|.++.++||++... ....|+.
T Consensus 24 ~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 24 EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 689999999999999999999999997443 4445555
No 204
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.82 E-value=0.069 Score=45.99 Aligned_cols=96 Identities=14% Similarity=0.130 Sum_probs=63.1
Q ss_pred ccCCCHHHHHHHHHhC-C-CeEEEEcCCcH--------HHHHHHHhhcCCCCcccceeeeeccCCCCCC--CHHHHHHHH
Q 016771 259 EVFDDVPEALEKWHSL-G-TKVYIYSSGSR--------LAQRLIFGNSNYGDLRKYLSGFFDTAVGNKR--ETPSYVEIT 326 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~-G-~~l~IvTn~~~--------~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP--~p~~~~~~~ 326 (383)
...|....-++++++. | ..++|+||+.. ...+.+-+..|+. ++.. ...|| ..+.+.+..
T Consensus 61 ~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIp----VlRH-----s~kKP~ct~E~~~y~~ 131 (190)
T KOG2961|consen 61 AIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIP----VLRH-----SVKKPACTAEEVEYHF 131 (190)
T ss_pred ccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCc----eEee-----cccCCCccHHHHHHHh
Confidence 4556767777777764 3 57999999742 2223333333221 1111 12344 445666655
Q ss_pred HHcCCCCCCcEEEEecCH-HhHHHHHHcCCcEEEEeCC
Q 016771 327 NSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 327 ~~l~v~~p~e~l~VGDs~-~Di~aA~~aG~~~i~v~~~ 363 (383)
....+..++|++||||.+ .||.-|...|--.+|..++
T Consensus 132 ~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~g 169 (190)
T KOG2961|consen 132 GNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPG 169 (190)
T ss_pred CCcccCChhHeEEEccchhhhHhhhhhccceeEEeccc
Confidence 444444489999999999 9999999999999999987
No 205
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=95.75 E-value=0.043 Score=54.03 Aligned_cols=96 Identities=19% Similarity=0.259 Sum_probs=66.2
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcH------------HHHHHHHhhcCCCCcc-cceeeeeccCCCCCCCHHHHHHH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSR------------LAQRLIFGNSNYGDLR-KYLSGFFDTAVGNKRETPSYVEI 325 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~------------~~~~~~l~~~~~~~l~-~~v~~~~d~~~~~KP~p~~~~~~ 325 (383)
.++|.+..=|+.|.+.||.++|.||... .-.+.+...+ ++. ..+.... ....+||...++...
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl---~vPi~~~~A~~-~~~yRKP~tGMwe~~ 179 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANL---GVPIQLLAAII-KGKYRKPSTGMWEFL 179 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhc---CCceEEeeecc-CCcccCcchhHHHHH
Confidence 4778888899999999999999999852 2234445554 332 2233311 134589999999999
Q ss_pred HHHcCCC---CCCcEEEEecC---------------HHhHHHHHHcCCcEE
Q 016771 326 TNSLGVD---KPSEILFVTDV---------------YQEATAAKAAGLEVV 358 (383)
Q Consensus 326 ~~~l~v~---~p~e~l~VGDs---------------~~Di~aA~~aG~~~i 358 (383)
.+..+-. ....+.||||. ..|+.-|.++|+...
T Consensus 180 ~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 180 KRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred HHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 8766532 14567788874 357889999998754
No 206
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=95.72 E-value=0.017 Score=56.44 Aligned_cols=14 Identities=21% Similarity=0.247 Sum_probs=12.4
Q ss_pred EEEecccCCCcccc
Q 016771 143 CIVLDIEGTTTPIS 156 (383)
Q Consensus 143 aVlFDlDGTL~d~~ 156 (383)
+++||+||||++..
T Consensus 2 ~~ifD~DGvL~~g~ 15 (321)
T TIGR01456 2 GFAFDIDGVLFRGK 15 (321)
T ss_pred EEEEeCcCceECCc
Confidence 68999999999864
No 207
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=95.67 E-value=0.016 Score=52.25 Aligned_cols=45 Identities=20% Similarity=0.202 Sum_probs=40.5
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 313 VGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 313 ~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
....+++..++.++++++++ +++|++|||+.+|+..++.+|+..+
T Consensus 159 p~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 159 PAGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred cCCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCCceE
Confidence 34677889999999999998 9999999999999999999998754
No 208
>PLN02423 phosphomannomutase
Probab=95.63 E-value=0.033 Score=52.22 Aligned_cols=37 Identities=19% Similarity=0.055 Sum_probs=30.6
Q ss_pred HHHHcCCCCCCcEEEEec----CHHhHHHHHHcCCcEEEEeCC
Q 016771 325 ITNSLGVDKPSEILFVTD----VYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 325 ~~~~l~v~~p~e~l~VGD----s~~Di~aA~~aG~~~i~v~~~ 363 (383)
+++.+. + +++|+.+|| +.||++.-+.-|+.++-|..+
T Consensus 193 al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~ 233 (245)
T PLN02423 193 CLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSP 233 (245)
T ss_pred HHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCH
Confidence 344444 6 999999999 689999999999999988764
No 209
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.58 E-value=0.03 Score=51.26 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=26.7
Q ss_pred HHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 323 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 323 ~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
+.+++.+|++ +++++.|||+.+|+..-+.+|...+
T Consensus 192 ~~l~~~~~i~-~~~~~~~GD~~ND~~Ml~~~~~~~a 226 (254)
T PF08282_consen 192 KYLLEYLGIS-PEDIIAFGDSENDIEMLELAGYSVA 226 (254)
T ss_dssp HHHHHHHTTS-GGGEEEEESSGGGHHHHHHSSEEEE
T ss_pred HHHhhhcccc-cceeEEeecccccHhHHhhcCeEEE
Confidence 3445556676 8899999999999999998887643
No 210
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.50 E-value=0.05 Score=51.98 Aligned_cols=88 Identities=16% Similarity=0.216 Sum_probs=56.0
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~---~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
.++||+.++|++|+++|++++++||++ +......++.+|+..-. .. .-+........+++.... ..
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~---~~-------i~ts~~~~~~~l~~~~~~-~~ 86 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLA---EQ-------LFSSALCAARLLRQPPDA-PK 86 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCh---hh-------EecHHHHHHHHHHhhCcC-CC
Confidence 489999999999999999999999975 33333456666331110 00 011223444555554444 67
Q ss_pred cEEEEecCHHhHHHHHHcCCcEE
Q 016771 336 EILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
.++++|+.. .....++.|+..+
T Consensus 87 ~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 87 AVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred EEEEEcCHH-HHHHHHHCCCEEe
Confidence 899999853 3445567788754
No 211
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=95.45 E-value=0.015 Score=53.98 Aligned_cols=49 Identities=12% Similarity=0.066 Sum_probs=41.5
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeC
Q 016771 312 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 362 (383)
Q Consensus 312 ~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~ 362 (383)
....++++...+.++++++++ +++|++|||+.+|+...+.+|... .+.+
T Consensus 154 ~~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~~~~i-av~n 202 (236)
T TIGR02471 154 LPLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGLTLGV-VVGN 202 (236)
T ss_pred eeCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCCCcEE-EEcC
Confidence 345678889999999999998 999999999999999999998654 4443
No 212
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=95.35 E-value=0.057 Score=60.95 Aligned_cols=97 Identities=14% Similarity=0.132 Sum_probs=72.8
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcc-----------cceeeeecc----------------
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-----------KYLSGFFDT---------------- 311 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~-----------~~v~~~~d~---------------- 311 (383)
++.|++.++++.|+++|+++.++|..+......+.+.+|+..-. .+++| ..
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG--~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTG--SQFDALSDEEVDDLKALC 723 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeeh--HHhhhcCHHHHHHHhhcC
Confidence 78999999999999999999999999999999999999653210 12222 10
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 312 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 312 ~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
.....-.|+-=..+.+.++-. -+.+.|+||+.||..+=++|.+...
T Consensus 724 ~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 724 LVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred eEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEe
Confidence 011233555556666666655 6789999999999999999987644
No 213
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=95.01 E-value=0.11 Score=53.83 Aligned_cols=83 Identities=16% Similarity=0.230 Sum_probs=66.2
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcE
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 337 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~ 337 (383)
.++.|++.++++.|++.|+++.++|..+......+-+.++ + + ..-.|+--..+.+++.-. ...+
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lg---i---~---------~~~~p~~K~~~v~~l~~~-g~~v 409 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELG---I---F---------ARVTPEEKAALVEALQKK-GRVV 409 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC---c---e---------eccCHHHHHHHHHHHHHC-CCEE
Confidence 3789999999999999999999999999999999988884 2 1 112344444555555544 5689
Q ss_pred EEEecCHHhHHHHHHcCCc
Q 016771 338 LFVTDVYQEATAAKAAGLE 356 (383)
Q Consensus 338 l~VGDs~~Di~aA~~aG~~ 356 (383)
.||||..+|..+-+.|++.
T Consensus 410 ~~vGDg~nD~~al~~Advg 428 (499)
T TIGR01494 410 AMTGDGVNDAPALKKADVG 428 (499)
T ss_pred EEECCChhhHHHHHhCCCc
Confidence 9999999999999999865
No 214
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=94.91 E-value=0.021 Score=49.53 Aligned_cols=83 Identities=20% Similarity=0.197 Sum_probs=52.5
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeecc--CCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT--AVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~--~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
..+.||+.++|+.|.+. |.++|.|+++..++..+++.+.-. ...|..++.. ....+. .+.+-++.++-+ .+
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~--~~~~~~~~~r~~~~~~~~---~~~KdL~~l~~~-~~ 107 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPN--GKLFSRRLYRDDCTFDKG---SYIKDLSKLGRD-LD 107 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTT--TSSEEEEEEGGGSEEETT---EEE--GGGSSS--GG
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhh--cccccccccccccccccc---ccccchHHHhhc-cc
Confidence 46889999999999765 999999999999999999988431 1233333321 111111 112556677776 89
Q ss_pred cEEEEecCHHhH
Q 016771 336 EILFVTDVYQEA 347 (383)
Q Consensus 336 e~l~VGDs~~Di 347 (383)
++++|.|++.-.
T Consensus 108 ~vvivDD~~~~~ 119 (159)
T PF03031_consen 108 NVVIVDDSPRKW 119 (159)
T ss_dssp GEEEEES-GGGG
T ss_pred cEEEEeCCHHHe
Confidence 999999999643
No 215
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.89 E-value=0.11 Score=57.95 Aligned_cols=103 Identities=19% Similarity=0.188 Sum_probs=77.4
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc---ceeeee-----cc---------CCCCCCCHH
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK---YLSGFF-----DT---------AVGNKRETP 320 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~---~v~~~~-----d~---------~~~~KP~p~ 320 (383)
.+|.|+++++++.|+++|+++.++|..+......+-+.+|+..-.. .++|.. +. ....+=.|+
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 4899999999999999999999999999999999999997443221 333311 00 112344566
Q ss_pred HHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEe
Q 016771 321 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 361 (383)
Q Consensus 321 ~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~ 361 (383)
-=.++.+.++-. -+-+.|+||..||+-|=++|.+......
T Consensus 626 qK~~IV~~lq~~-g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 626 QKARIVEALQKS-GHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred HHHHHHHHHHhC-CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 666666666665 6789999999999999999998765544
No 216
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=94.87 E-value=0.033 Score=52.18 Aligned_cols=61 Identities=13% Similarity=0.158 Sum_probs=45.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCC
Q 016771 315 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 379 (383)
Q Consensus 315 ~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~s 379 (383)
.-.+......+++.++++ +++|++|||+.+|+...+.+|+.++. .+. .+.....+++++.+
T Consensus 186 ~~~K~~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~~~a~-~na--~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 186 GVSKGSALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGYGVAM-GNA--DEELKALADYVTDS 246 (256)
T ss_pred CCChHHHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCceeEe-cCc--hHHHHHhCCEEecC
Confidence 344678899999999998 99999999999999999999987544 322 12222334666654
No 217
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.71 E-value=0.1 Score=56.56 Aligned_cols=85 Identities=19% Similarity=0.204 Sum_probs=64.7
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 338 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l 338 (383)
++.||+..++..|++.|++++++|+.+....+..-++. ++..++.. -+|.- -....+++.-. ...+.
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V---Gi~~V~ae-------v~P~~--K~~~Ik~lq~~-~~~Va 789 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV---GIDNVYAE-------VLPEQ--KAEKIKEIQKN-GGPVA 789 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh---CcceEEec-------cCchh--hHHHHHHHHhc-CCcEE
Confidence 68899999999999999999999999999999999999 43333332 34422 23344445444 56899
Q ss_pred EEecCHHhHHHHHHcCCc
Q 016771 339 FVTDVYQEATAAKAAGLE 356 (383)
Q Consensus 339 ~VGDs~~Di~aA~~aG~~ 356 (383)
||||..||-.|-.+|.+.
T Consensus 790 MVGDGINDaPALA~AdVG 807 (951)
T KOG0207|consen 790 MVGDGINDAPALAQADVG 807 (951)
T ss_pred EEeCCCCccHHHHhhccc
Confidence 999999998877776654
No 218
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.64 E-value=0.14 Score=46.96 Aligned_cols=97 Identities=15% Similarity=-0.040 Sum_probs=48.1
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccC---CCCCCC-HHHHHHHHHHcCCCCCC
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTA---VGNKRE-TPSYVEITNSLGVDKPS 335 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~---~~~KP~-p~~~~~~~~~l~v~~p~ 335 (383)
=+|.....|..+++. -..|++-++......+-.++...++.-.-...|-.+ ...|-. .......-++++-. .
T Consensus 135 Glpre~aaLa~~rEy--seti~~rs~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~--r 210 (274)
T COG3769 135 GLPREQAALAMLREY--SETIIWRSSDERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGGA--R 210 (274)
T ss_pred CCChHHhHHHHHHHh--hhheeecccchHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCce--e
Confidence 456666777777774 455555444332222333333335542111111111 112432 23333333444432 2
Q ss_pred cEEEEecCHHhHHHHHHcCCcEEEEe
Q 016771 336 EILFVTDVYQEATAAKAAGLEVVISI 361 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~aG~~~i~v~ 361 (383)
-++-+||+++|+-- ...++..+.|.
T Consensus 211 ~t~~~GDg~nD~Pl-~ev~d~AfiV~ 235 (274)
T COG3769 211 TTLGLGDGPNDAPL-LEVMDYAFIVK 235 (274)
T ss_pred EEEecCCCCCcccH-HHhhhhheeec
Confidence 48999999999865 45566666565
No 219
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.53 E-value=0.095 Score=58.98 Aligned_cols=99 Identities=17% Similarity=0.124 Sum_probs=71.6
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcc-------------------------cceeeee-c--
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-------------------------KYLSGFF-D-- 310 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~-------------------------~~v~~~~-d-- 310 (383)
++.|++.+++++|+++|+++.++|..+......+.+.+++..-. .+++|-. +
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 78899999999999999999999999999999999988652100 0222200 0
Q ss_pred -------------cCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 311 -------------TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 311 -------------~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
......-.|+--..+.+.+.-. .+-|.|+||+.||+.|=++|.+...
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCccee
Confidence 0012334555556666666554 5679999999999999999987643
No 220
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=94.25 E-value=0.057 Score=52.41 Aligned_cols=103 Identities=12% Similarity=0.089 Sum_probs=67.9
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhc---CCCCcccceeeeecc----CCCCCC----C----HH---
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS---NYGDLRKYLSGFFDT----AVGNKR----E----TP--- 320 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~---~~~~l~~~v~~~~d~----~~~~KP----~----p~--- 320 (383)
.--|....+|+.|+++|.++.++||++...+..-+..+ .|.++|++|..--+. ...++| + .-
T Consensus 240 ~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wd 319 (510)
T KOG2470|consen 240 ERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWD 319 (510)
T ss_pred hccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhh
Confidence 34567889999999999999999999998887665544 355666633210010 001111 1 11
Q ss_pred --------------HHHHHHHHcCCCCCCcEEEEecCH-HhHHHHH-HcCCcEEEEeC
Q 016771 321 --------------SYVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIR 362 (383)
Q Consensus 321 --------------~~~~~~~~l~v~~p~e~l~VGDs~-~Di~aA~-~aG~~~i~v~~ 362 (383)
.....++--|.. -.+++|+||.+ .|+..-. +.|++|-++-.
T Consensus 320 kv~klekgkiYy~G~l~~flelt~Wr-G~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 320 KVDKLEKGKIYYQGNLKSFLELTGWR-GPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred hhhhcccCceeeeccHHHHHHHhccC-CCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 112234445676 78999999999 8988776 99999877653
No 221
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=93.87 E-value=0.066 Score=50.51 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=22.6
Q ss_pred CCCeEEEecccCCCccccccchhhhhHHHHHHHhHH
Q 016771 139 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHL 174 (383)
Q Consensus 139 ~~ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~~~~l 174 (383)
|++|.|+|||||||++... .+-+...+++.++.
T Consensus 1 m~~kli~~DlDGTLl~~~~---~i~~~~~~ai~~l~ 33 (270)
T PRK10513 1 MAIKLIAIDMDGTLLLPDH---TISPAVKQAIAAAR 33 (270)
T ss_pred CceEEEEEecCCcCcCCCC---ccCHHHHHHHHHHH
Confidence 4689999999999998642 23344555555543
No 222
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.74 E-value=0.19 Score=50.99 Aligned_cols=93 Identities=13% Similarity=0.154 Sum_probs=74.2
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcE
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 337 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~ 337 (383)
.+|-...+.+..|+++|+-++|+|-+....++..+.....--+.. -|+. ....+-|+.+-++++++++|+. .+..
T Consensus 255 ~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp~MiLkeedfa~---~~iNW~~K~eNirkIAkklNlg-~dSm 330 (574)
T COG3882 255 EAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHPDMILKEEDFAV---FQINWDPKAENIRKIAKKLNLG-LDSM 330 (574)
T ss_pred hhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCCCeEeeHhhhhh---heecCCcchhhHHHHHHHhCCC-ccce
Confidence 567778899999999999999999999999998888773111111 1111 1235789999999999999998 9999
Q ss_pred EEEecCHHhHHHHHHcCC
Q 016771 338 LFVTDVYQEATAAKAAGL 355 (383)
Q Consensus 338 l~VGDs~~Di~aA~~aG~ 355 (383)
+||+|++...+--++-+=
T Consensus 331 vFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 331 VFIDDNPAERELVKRELP 348 (574)
T ss_pred EEecCCHHHHHHHHhcCc
Confidence 999999988888887775
No 223
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=93.67 E-value=0.18 Score=46.79 Aligned_cols=89 Identities=15% Similarity=0.125 Sum_probs=55.2
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHH-HHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~-~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
...+.||+.+||+..-++|..++-+||...+. ...-++.+.-.++.......+---...|++..-+..+-+ . -+
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~-~~ 194 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK----D-YK 194 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh----c-cc
Confidence 34789999999999999999999999998776 333333332223332111100000123554444444444 3 55
Q ss_pred cEEEEecCHHhHHHH
Q 016771 336 EILFVTDVYQEATAA 350 (383)
Q Consensus 336 e~l~VGDs~~Di~aA 350 (383)
-+++|||+..|....
T Consensus 195 iVm~vGDNl~DF~d~ 209 (274)
T COG2503 195 IVMLVGDNLDDFGDN 209 (274)
T ss_pred eeeEecCchhhhcch
Confidence 789999999776543
No 224
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=93.66 E-value=4.2 Score=37.63 Aligned_cols=40 Identities=8% Similarity=-0.029 Sum_probs=34.2
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 298 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~ 298 (383)
.++.||+.++++.|.++ .+-+|+|.+...+.++..+.+|+
T Consensus 82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGV 121 (315)
T ss_pred cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCC
Confidence 57899999999999986 77888998888888888877753
No 225
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=93.64 E-value=0.14 Score=48.62 Aligned_cols=43 Identities=12% Similarity=0.010 Sum_probs=31.7
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHc---CCcEEEEeC
Q 016771 319 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA---GLEVVISIR 362 (383)
Q Consensus 319 p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~a---G~~~i~v~~ 362 (383)
-....++++.+++. .++++++||+.+|+.+-+.+ |..+|.|..
T Consensus 176 g~al~~ll~~~~~~-~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~ 221 (266)
T PRK10187 176 GEAIAAFMQEAPFA-GRTPVFVGDDLTDEAGFAVVNRLGGISVKVGT 221 (266)
T ss_pred HHHHHHHHHhcCCC-CCeEEEEcCCccHHHHHHHHHhcCCeEEEECC
Confidence 34455667777887 88999999999998887766 445566643
No 226
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.40 E-value=0.22 Score=50.10 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=77.5
Q ss_pred cccCCC--HHHHHHHHHhCCCeEEEEcCC--cHHHHHHHHhhcCCCCcc-c-ceeeeeccCCCCCCCHHHHHHHHHHcCC
Q 016771 258 GEVFDD--VPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGNSNYGDLR-K-YLSGFFDTAVGNKRETPSYVEITNSLGV 331 (383)
Q Consensus 258 ~~~~pg--v~e~L~~L~~~G~~l~IvTn~--~~~~~~~~l~~~~~~~l~-~-~v~~~~d~~~~~KP~p~~~~~~~~~l~v 331 (383)
..++|. ..++.+.+.+.|.++.++|.. +....+.+|...|..... + |.++ ...-.|-+-..|..+++.-++
T Consensus 96 evLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~---e~rl~KnSg~LFk~Vlk~EnV 172 (635)
T COG5610 96 EVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSS---EFRLKKNSGNLFKAVLKLENV 172 (635)
T ss_pred eEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecc---eeehhcccchHHHHHHhhcCC
Confidence 356665 468899999999999999998 577788888877432111 1 2333 123468888999999999999
Q ss_pred CCCCcEEEEecCH-HhHHHHHHcCCcEEEE
Q 016771 332 DKPSEILFVTDVY-QEATAAKAAGLEVVIS 360 (383)
Q Consensus 332 ~~p~e~l~VGDs~-~Di~aA~~aG~~~i~v 360 (383)
+ |.+.+.|||.. .|+.-+++.|+.|...
T Consensus 173 d-~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 173 D-PKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred C-hhheEEecCchhhhhcCccccchhHHHH
Confidence 8 99999999998 8999999999988654
No 227
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=93.14 E-value=0.58 Score=53.12 Aligned_cols=40 Identities=8% Similarity=0.127 Sum_probs=37.6
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 298 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~ 298 (383)
++.|++.++++.|+++|+++.++|..+......+.+.+|+
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gi 695 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI 695 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 7899999999999999999999999999999999888865
No 228
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=92.61 E-value=3.2 Score=42.83 Aligned_cols=87 Identities=11% Similarity=0.049 Sum_probs=49.4
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHhh-cCCCCc---------ccceeeeeccCCCCCCCHHH-HHHHHHHcCCCCCC
Q 016771 267 ALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDL---------RKYLSGFFDTAVGNKRETPS-YVEITNSLGVDKPS 335 (383)
Q Consensus 267 ~L~~L~~~G~~l~IvTn~~~~~~~~~l~~-~~~~~l---------~~~v~~~~d~~~~~KP~p~~-~~~~~~~l~v~~p~ 335 (383)
.++..++.| +++|+|..++.+++..++. ++...+ ..+++|.++ .+...+. ...+.+.++- ..
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~----G~n~~ek~~~rl~~~~g~--~~ 173 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIR----GTDVDQSVANRVANLFVD--ER 173 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEe----cCccHHHHHHHHHHHhCc--cC
Confidence 556667778 9999999999999999998 643322 113333222 2222333 3334444552 34
Q ss_pred cEEEEecCHHhHHHHHHcCCcEEEEeC
Q 016771 336 EILFVTDVYQEATAAKAAGLEVVISIR 362 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~aG~~~i~v~~ 362 (383)
..+=+||+..|-.-..- |+-+.+..
T Consensus 174 ~~vg~~~~~~~~~f~~~--ck~~~~~~ 198 (498)
T PLN02499 174 PQLGLGRISASSSFLSL--CKEQIHPP 198 (498)
T ss_pred ceecccCCcccchhhhh--CceEEecC
Confidence 56677777644433332 44555543
No 229
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=92.51 E-value=0.16 Score=57.55 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=36.0
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 298 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~ 298 (383)
.++-||+.++++.|+++|+++.++|+.....+..+....++
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCC
Confidence 37899999999999999999999999988888877766643
No 230
>PRK10976 putative hydrolase; Provisional
Probab=92.24 E-value=0.18 Score=47.43 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=22.2
Q ss_pred CCeEEEecccCCCccccccchhhhhHHHHHHHhHH
Q 016771 140 FPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHL 174 (383)
Q Consensus 140 ~ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~~~~l 174 (383)
|+|.|+|||||||++... .+-+...+++.+..
T Consensus 1 mikli~~DlDGTLl~~~~---~is~~~~~ai~~l~ 32 (266)
T PRK10976 1 MYQVVASDLDGTLLSPDH---TLSPYAKETLKLLT 32 (266)
T ss_pred CceEEEEeCCCCCcCCCC---cCCHHHHHHHHHHH
Confidence 479999999999998642 23445556655544
No 231
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=91.83 E-value=0.087 Score=44.34 Aligned_cols=28 Identities=29% Similarity=0.285 Sum_probs=21.0
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHH
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRL 287 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~ 287 (383)
+.+++.+.|++|+++|+.+.++|..+..
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~ 52 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMR 52 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCch
Confidence 3456667788888888888888887654
No 232
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=91.49 E-value=1.1 Score=41.92 Aligned_cols=99 Identities=17% Similarity=0.208 Sum_probs=55.9
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc---ceeee--eccC----CCCCCCHHHHHHHHH
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK---YLSGF--FDTA----VGNKRETPSYVEITN 327 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~---~v~~~--~d~~----~~~KP~p~~~~~~~~ 327 (383)
.+.+.+|+.++++.|+++++++.|+|.+-...+...+++.+ .+++ +++-+ ||.. ...-|--..|.+-..
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~--~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~ 165 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAG--VFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNES 165 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT----BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcC--CCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcc
Confidence 45799999999999999999999999999999999999873 2333 44431 2221 111222222222111
Q ss_pred Hc-------CCCCCCcEEEEecCHHhHHHHHHc-CCcE
Q 016771 328 SL-------GVDKPSEILFVTDVYQEATAAKAA-GLEV 357 (383)
Q Consensus 328 ~l-------~v~~p~e~l~VGDs~~Di~aA~~a-G~~~ 357 (383)
.+ .++...+++..|||..|+..|..+ ....
T Consensus 166 ~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~ 203 (246)
T PF05822_consen 166 ALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEEN 203 (246)
T ss_dssp HHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SE
T ss_pred cccCchHHHHhccCCcEEEecCccCChHhhcCCCcccc
Confidence 11 222357899999999999988766 4443
No 233
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=91.47 E-value=0.66 Score=50.15 Aligned_cols=99 Identities=19% Similarity=0.211 Sum_probs=75.3
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-----ceee-eeccC-------------CCCCCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-----YLSG-FFDTA-------------VGNKRE 318 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-----~v~~-~~d~~-------------~~~KP~ 318 (383)
.+|.|++++.++.++..|+++..+|..+......+.+++|+-+..+ .++| -||+. ....-.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 3799999999999999999999999999999999999995332222 2222 11210 112446
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcE
Q 016771 319 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 357 (383)
Q Consensus 319 p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~ 357 (383)
|+--.++.+.|+-. .+=|.|-||..||..|-|.|.+..
T Consensus 663 P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGI 700 (972)
T KOG0202|consen 663 PQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGI 700 (972)
T ss_pred chhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccce
Confidence 67777777777776 788999999999999999998753
No 234
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=90.83 E-value=1.7 Score=40.68 Aligned_cols=41 Identities=2% Similarity=0.011 Sum_probs=34.0
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCC---cHHHHHHHHhhcCCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSG---SRLAQRLIFGNSNYG 299 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~---~~~~~~~~l~~~~~~ 299 (383)
.++|++.++|++|+++|++++++||+ +.......++.+++.
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 46789999999999999999999994 466667778887543
No 235
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=90.48 E-value=0.12 Score=46.06 Aligned_cols=16 Identities=19% Similarity=0.275 Sum_probs=14.7
Q ss_pred CCeEEEecccCCCccc
Q 016771 140 FPRCIVLDIEGTTTPI 155 (383)
Q Consensus 140 ~ikaVlFDlDGTL~d~ 155 (383)
.+|+|+||+||||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4999999999999985
No 236
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=90.01 E-value=0.81 Score=42.86 Aligned_cols=44 Identities=9% Similarity=0.089 Sum_probs=37.0
Q ss_pred CCCCHHHHHHHHHHcCCCC--CCcEEEEecCHHhHHHHHHcCCcEEE
Q 016771 315 NKRETPSYVEITNSLGVDK--PSEILFVTDVYQEATAAKAAGLEVVI 359 (383)
Q Consensus 315 ~KP~p~~~~~~~~~l~v~~--p~e~l~VGDs~~Di~aA~~aG~~~i~ 359 (383)
.-.+......+++.+++ + ++++++|||+.+|+...+.+|..++.
T Consensus 174 ~~~Kg~ai~~l~~~~~i-~~~~~~~~a~GD~~ND~~Ml~~ag~~vam 219 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQ-PGGAIKVVGLGDSPNDLPLLEVVDLAVVV 219 (256)
T ss_pred CCCHHHHHHHHHHHHhh-cCCCceEEEEcCCHhhHHHHHHCCEEEEe
Confidence 34456778899999997 4 78999999999999999999987554
No 237
>PLN02580 trehalose-phosphatase
Probab=89.96 E-value=0.52 Score=47.14 Aligned_cols=34 Identities=21% Similarity=0.128 Sum_probs=21.9
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHh
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG 294 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~ 294 (383)
+-|++.+.|++|.+. .+++|+|..+...++.++.
T Consensus 142 ~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~ 175 (384)
T PLN02580 142 MSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVG 175 (384)
T ss_pred CCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhC
Confidence 445666666666665 4677777777666666654
No 238
>PLN02887 hydrolase family protein
Probab=89.93 E-value=0.38 Score=50.78 Aligned_cols=34 Identities=18% Similarity=0.063 Sum_probs=23.6
Q ss_pred CCCeEEEecccCCCccccccchhhhhHHHHHHHhHHh
Q 016771 139 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLS 175 (383)
Q Consensus 139 ~~ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~~~~l~ 175 (383)
+++|.|+|||||||++... .+-+...+++.++..
T Consensus 306 ~~iKLIa~DLDGTLLn~d~---~Is~~t~eAI~kl~e 339 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSKS---QISETNAKALKEALS 339 (580)
T ss_pred cCccEEEEeCCCCCCCCCC---ccCHHHHHHHHHHHH
Confidence 5799999999999998642 234455556555443
No 239
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=89.92 E-value=0.45 Score=43.35 Aligned_cols=28 Identities=18% Similarity=0.163 Sum_probs=18.9
Q ss_pred EEecccCCCccccccchhhhhHHHHHHHhHH
Q 016771 144 IVLDIEGTTTPISFVSEVLFPYARDNVGKHL 174 (383)
Q Consensus 144 VlFDlDGTL~d~~~v~~~l~~~~~~~~~~~l 174 (383)
|+||+||||++... .+-+...+++..+.
T Consensus 1 i~~DlDGTLl~~~~---~i~~~~~~al~~l~ 28 (254)
T PF08282_consen 1 IFSDLDGTLLNSDG---KISPETIEALKELQ 28 (254)
T ss_dssp EEEECCTTTCSTTS---SSCHHHHHHHHHHH
T ss_pred cEEEECCceecCCC---eeCHHHHHHHHhhc
Confidence 78999999998542 14455566665544
No 240
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=89.87 E-value=0.36 Score=44.61 Aligned_cols=42 Identities=10% Similarity=0.081 Sum_probs=32.5
Q ss_pred CCCCCHHHHHHHHHHcCC--CCCCcEEEEecCHHhHHHHHHcCCcEE
Q 016771 314 GNKRETPSYVEITNSLGV--DKPSEILFVTDVYQEATAAKAAGLEVV 358 (383)
Q Consensus 314 ~~KP~p~~~~~~~~~l~v--~~p~e~l~VGDs~~Di~aA~~aG~~~i 358 (383)
..|+ .....+++.+++ + +++|++|||+.+|+.+.+.+|+.++
T Consensus 180 ~sK~--~al~~l~~~~~~~~~-~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 180 SDKG--KAIKRLLDLYKLRPG-AIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCHH--HHHHHHHHHhccccC-cccEEEEcCCHHHHHHHHhCCCcEe
Confidence 3554 445566666654 5 7899999999999999999999764
No 241
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=89.86 E-value=0.46 Score=44.89 Aligned_cols=32 Identities=16% Similarity=0.134 Sum_probs=22.9
Q ss_pred CCeEEEecccCCCccccccchhhhhHHHHHHHhHH
Q 016771 140 FPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHL 174 (383)
Q Consensus 140 ~ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~~~~l 174 (383)
|+|+|+|||||||++... .+-+...+++.++.
T Consensus 1 m~kli~~DlDGTLl~~~~---~i~~~~~~ai~~l~ 32 (272)
T PRK15126 1 MARLAAFDMDGTLLMPDH---HLGEKTLSTLARLR 32 (272)
T ss_pred CccEEEEeCCCcCcCCCC---cCCHHHHHHHHHHH
Confidence 589999999999998642 24455566666554
No 242
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=89.83 E-value=0.35 Score=40.55 Aligned_cols=15 Identities=27% Similarity=0.361 Sum_probs=13.2
Q ss_pred eEEEecccCCCcccc
Q 016771 142 RCIVLDIEGTTTPIS 156 (383)
Q Consensus 142 kaVlFDlDGTL~d~~ 156 (383)
|+++||+||||.+..
T Consensus 1 kli~~DlD~Tl~~~~ 15 (128)
T TIGR01681 1 KVIVFDLDNTLWTGE 15 (128)
T ss_pred CEEEEeCCCCCCCCC
Confidence 689999999999873
No 243
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=89.14 E-value=1.1 Score=42.40 Aligned_cols=34 Identities=21% Similarity=0.046 Sum_probs=22.7
Q ss_pred CCCCCeEEEecccCCCccccccchhhhhHHHHHHHhH
Q 016771 137 SGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKH 173 (383)
Q Consensus 137 ~~~~ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~~~~ 173 (383)
++..+++|++||||||++... ..-+...+.+.+.
T Consensus 3 ~~~~~~lI~~DlDGTLL~~~~---~i~~~~~~ai~~l 36 (271)
T PRK03669 3 SLQDPLLIFTDLDGTLLDSHT---YDWQPAAPWLTRL 36 (271)
T ss_pred CcCCCeEEEEeCccCCcCCCC---cCcHHHHHHHHHH
Confidence 456789999999999998632 1234444554443
No 244
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=88.68 E-value=0.39 Score=45.29 Aligned_cols=40 Identities=10% Similarity=0.090 Sum_probs=32.6
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHhhcCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNY 298 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~---~~~~~l~~~~~ 298 (383)
.++|++.++|++|+++|++++++||++.. .....++.+++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 38999999999999999999999998644 35556666643
No 245
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=88.47 E-value=2.3 Score=39.70 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=54.6
Q ss_pred EEEEcCCcHH--HHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCC
Q 016771 278 VYIYSSGSRL--AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 355 (383)
Q Consensus 278 l~IvTn~~~~--~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~ 355 (383)
=++||++.-. .++-+|-+ ++++|++ ..+++....+ +...|+.+.+++|-+ .-.-++|||......||+..+|
T Consensus 178 NvLVTs~qLVPaLaKcLLy~--L~~~f~i-eNIYSa~kvG--K~~cFe~I~~Rfg~p-~~~f~~IGDG~eEe~aAk~l~w 251 (274)
T TIGR01658 178 NVLVTSGQLIPSLAKCLLFR--LDTIFRI-ENVYSSIKVG--KLQCFKWIKERFGHP-KVRFCAIGDGWEECTAAQAMNW 251 (274)
T ss_pred EEEEEcCccHHHHHHHHHhc--cCCcccc-ccccchhhcc--hHHHHHHHHHHhCCC-CceEEEeCCChhHHHHHHhcCC
Confidence 4567777533 33333333 3455541 1112222234 458999999999985 7889999999999999999999
Q ss_pred cEEEEeCC
Q 016771 356 EVVISIRP 363 (383)
Q Consensus 356 ~~i~v~~~ 363 (383)
.++-+...
T Consensus 252 PFw~I~~h 259 (274)
T TIGR01658 252 PFVKIDLH 259 (274)
T ss_pred CeEEeecC
Confidence 99887754
No 246
>PRK10444 UMP phosphatase; Provisional
Probab=88.36 E-value=0.4 Score=45.09 Aligned_cols=37 Identities=8% Similarity=0.045 Sum_probs=30.3
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhh
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 295 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~ 295 (383)
.++|++.++|+.|+++|.++.++||++......+.++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~ 53 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANR 53 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHH
Confidence 5799999999999999999999999986544444333
No 247
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=88.08 E-value=1.1 Score=44.78 Aligned_cols=105 Identities=13% Similarity=0.151 Sum_probs=74.1
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhc---CCCCcccceeee------ecc-----------------
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS---NYGDLRKYLSGF------FDT----------------- 311 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~---~~~~l~~~v~~~------~d~----------------- 311 (383)
+...+-...+|..+++.|.++.++||+...+......++ +|..+|+++--. |..
T Consensus 197 V~~d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g 276 (424)
T KOG2469|consen 197 VVYDGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNG 276 (424)
T ss_pred eeecCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeecccccccccc
Confidence 344555666999999999999999999988877776655 233444421110 000
Q ss_pred ------CCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-HhHH-HHHHcCCcEEEEeCC
Q 016771 312 ------AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEAT-AAKAAGLEVVISIRP 363 (383)
Q Consensus 312 ------~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~-~Di~-aA~~aG~~~i~v~~~ 363 (383)
....++++.+-..+++.+++. ..+++||||+. .||. .-+.-|+.+++|...
T Consensus 277 ~~~~p~e~~~~ySggs~~~~~~~l~~~-g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe 335 (424)
T KOG2469|consen 277 DNTGPLEQGGVYSGGSLKTVETSMKVK-GKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE 335 (424)
T ss_pred ccCCcchhcccCCcchHHHHHHHhccc-ccceeecccceeeeEEecceecceEEEEEehh
Confidence 012355668888899999998 89999999999 6664 446679999988754
No 248
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=87.85 E-value=1.9 Score=39.97 Aligned_cols=84 Identities=8% Similarity=0.076 Sum_probs=48.7
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHhh-cCCCCcc-cceeeeeccCCCCCCCHHHHHHHHHHcCCCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGN-SNYGDLR-KYLSGFFDTAVGNKRETPSYVEITNSLGVDK 333 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~---~~~~~l~~-~~~~~l~-~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~ 333 (383)
.++|++.++|+.|+++|+++.++||++.. .....+.. +++.--. +++++ .......+++.. .
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits-----------~~~~~~~l~~~~-~- 80 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS-----------GSVTKDLLRQRF-E- 80 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH-----------HHHHHHHHHHhC-C-
Confidence 57999999999999999999999988632 23233443 4221001 12222 122222233222 2
Q ss_pred CCcEEEEecCHHhHHHHHHcCCc
Q 016771 334 PSEILFVTDVYQEATAAKAAGLE 356 (383)
Q Consensus 334 p~e~l~VGDs~~Di~aA~~aG~~ 356 (383)
.+.++++|.. ......+..|+.
T Consensus 81 ~~~v~v~G~~-~~~~~l~~~g~~ 102 (236)
T TIGR01460 81 GEKVYVIGVG-ELRESLEGLGFR 102 (236)
T ss_pred CCEEEEECCH-HHHHHHHHcCCc
Confidence 3568888853 445566777764
No 249
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=87.00 E-value=1.1 Score=48.76 Aligned_cols=48 Identities=10% Similarity=-0.060 Sum_probs=30.5
Q ss_pred CCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeeeCCccC
Q 016771 330 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 382 (383)
Q Consensus 330 ~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vI~sl~e 382 (383)
+++ ++.++++||+.+|...-+.++...+.|.-+.. + ..+.+++++..|
T Consensus 668 ~~~-~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~-~---s~A~~~l~~~~e 715 (726)
T PRK14501 668 AGP-YDFVLAIGDDTTDEDMFRALPETAITVKVGPG-E---SRARYRLPSQRE 715 (726)
T ss_pred cCC-CCEEEEECCCCChHHHHHhcccCceEEEECCC-C---CcceEeCCCHHH
Confidence 355 78999999999999999987533333333321 1 223566666543
No 250
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=86.60 E-value=3.9 Score=37.05 Aligned_cols=91 Identities=13% Similarity=0.021 Sum_probs=56.5
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc-ceeeeeccC----------C--CCCCCHHHHHHHH
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTA----------V--GNKRETPSYVEIT 326 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~-~v~~~~d~~----------~--~~KP~p~~~~~~~ 326 (383)
..|++.+||+.+.+ .|.++|.|.++...+..++..++...-.. -+..+.+.. + ..|+=. .+-
T Consensus 46 kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~----~lw 120 (195)
T TIGR02245 46 MRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLG----VIW 120 (195)
T ss_pred eCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecH----Hhh
Confidence 46999999999998 59999999999999999999874321110 011111111 0 134311 222
Q ss_pred HHcCC--CCCCcEEEEecCHHhHHHHHHcCCc
Q 016771 327 NSLGV--DKPSEILFVTDVYQEATAAKAAGLE 356 (383)
Q Consensus 327 ~~l~v--~~p~e~l~VGDs~~Di~aA~~aG~~ 356 (383)
++++. + .+++++|.|++.-...--..|+.
T Consensus 121 ~~l~~~~~-~~ntiiVDd~p~~~~~~P~N~i~ 151 (195)
T TIGR02245 121 ALLPEFYS-MKNTIMFDDLRRNFLMNPQNGLK 151 (195)
T ss_pred hhcccCCC-cccEEEEeCCHHHHhcCCCCccc
Confidence 24442 5 78999999999544433334544
No 251
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=86.18 E-value=2.2 Score=43.94 Aligned_cols=85 Identities=13% Similarity=0.192 Sum_probs=66.1
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 338 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l 338 (383)
..-||++|-+.+||+.|++...+|..++-....+-+.. +..+++.. .||.. -....++.+-. -.=+.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA---GVDdfiAe-------atPEd--K~~~I~~eQ~~-grlVA 513 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA---GVDDFIAE-------ATPED--KLALIRQEQAE-GRLVA 513 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh---Cchhhhhc-------CChHH--HHHHHHHHHhc-CcEEE
Confidence 46799999999999999999999999988888888888 43333332 56644 34556666665 67899
Q ss_pred EEecCHHhHHHHHHcCCc
Q 016771 339 FVTDVYQEATAAKAAGLE 356 (383)
Q Consensus 339 ~VGDs~~Di~aA~~aG~~ 356 (383)
|.||..||..|-.+|...
T Consensus 514 MtGDGTNDAPALAqAdVg 531 (681)
T COG2216 514 MTGDGTNDAPALAQADVG 531 (681)
T ss_pred EcCCCCCcchhhhhcchh
Confidence 999999998887777654
No 252
>PLN03190 aminophospholipid translocase; Provisional
Probab=86.14 E-value=1 Score=51.64 Aligned_cols=39 Identities=26% Similarity=0.340 Sum_probs=32.9
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhc
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 296 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~ 296 (383)
.++-+|+.++++.|+++|+++.++|+.....+..+-...
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~ 763 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSS 763 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHh
Confidence 389999999999999999999999998877666654433
No 253
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=85.72 E-value=3.5 Score=39.40 Aligned_cols=85 Identities=16% Similarity=0.125 Sum_probs=63.2
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccce-eeee--------------------------ccC
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--------------------------DTA 312 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v-~~~~--------------------------d~~ 312 (383)
+.|.+.+.|..|++.|..+++-|.|+++.+...++.+++.++|+.| ++-. |..
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~ 222 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVT 222 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCC
Confidence 5689999999999999999999999999999999999888887732 2200 000
Q ss_pred C-C-CCCCHHHHHHHHHHcCCCCCCcEEEEecCH
Q 016771 313 V-G-NKRETPSYVEITNSLGVDKPSEILFVTDVY 344 (383)
Q Consensus 313 ~-~-~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~ 344 (383)
. . --.+|...+..+++.|+.-.+.+-.|+|=.
T Consensus 223 ~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~ 256 (297)
T PF05152_consen 223 NVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 256 (297)
T ss_pred cCCCCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence 0 0 012678888888888887446667777755
No 254
>PLN02382 probable sucrose-phosphatase
Probab=85.26 E-value=1.7 Score=44.06 Aligned_cols=45 Identities=16% Similarity=0.160 Sum_probs=39.0
Q ss_pred CHHHHHHHHHHc---CCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 318 ETPSYVEITNSL---GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 318 ~p~~~~~~~~~l---~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
+-.....+++++ |++ +++++.+||+.||+..-+.+|...|.+.+.
T Consensus 176 Kg~Al~~L~~~~~~~gi~-~~~~iafGDs~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 176 KGQALAYLLKKLKAEGKA-PVNTLVCGDSGNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred HHHHHHHHHHHhhhcCCC-hhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence 457788889998 998 999999999999999999999777777654
No 255
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=83.52 E-value=0.53 Score=40.63 Aligned_cols=16 Identities=38% Similarity=0.561 Sum_probs=12.9
Q ss_pred eEEEecccCCCccccc
Q 016771 142 RCIVLDIEGTTTPISF 157 (383)
Q Consensus 142 kaVlFDlDGTL~d~~~ 157 (383)
|++|||+||||+.+..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 6899999999998753
No 256
>KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton]
Probab=83.51 E-value=1.4 Score=45.85 Aligned_cols=47 Identities=23% Similarity=0.242 Sum_probs=41.7
Q ss_pred CCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 016771 54 YPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 101 (383)
Q Consensus 54 ~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~~ 101 (383)
.|. .-.+|||||+++.|+|+++|+-..--+.-.||..+++..-|.+-
T Consensus 191 g~~-kvl~lrN~g~~~~g~t~eeA~~~~~~~~~ace~qv~~~a~g~dn 237 (598)
T KOG3699|consen 191 GPK-KVLVLRNHGVVSVGETVEEAFYYIFNLVLACEIQVSASAGGLDN 237 (598)
T ss_pred Ccc-ceEEEecccccccchhHHHHHHHhhcchhhhhhhhhhcccCccc
Confidence 466 89999999999999999999999999999999999976677664
No 257
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=83.05 E-value=1 Score=36.18 Aligned_cols=26 Identities=15% Similarity=0.216 Sum_probs=17.2
Q ss_pred EEecccCCCccccccchhhhhHHHHHHHhH
Q 016771 144 IVLDIEGTTTPISFVSEVLFPYARDNVGKH 173 (383)
Q Consensus 144 VlFDlDGTL~d~~~v~~~l~~~~~~~~~~~ 173 (383)
++||+||||+.-. ..+|-+.+.+...
T Consensus 1 ~l~D~dGvl~~g~----~~ipga~e~l~~L 26 (101)
T PF13344_consen 1 FLFDLDGVLYNGN----EPIPGAVEALDAL 26 (101)
T ss_dssp EEEESTTTSEETT----EE-TTHHHHHHHH
T ss_pred CEEeCccEeEeCC----CcCcCHHHHHHHH
Confidence 6999999999753 2456665555443
No 258
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=82.61 E-value=4.1 Score=39.15 Aligned_cols=94 Identities=13% Similarity=0.109 Sum_probs=57.4
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHH---HhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI---FGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~---l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
.+.||+.++|..|++.|..+.++||++....+.. ++++|...+. . + ...-|.-.+..++-+.. .. .+
T Consensus 38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~----e--~--~i~ssa~~~a~ylk~~~-~~-~k 107 (306)
T KOG2882|consen 38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVK----E--E--NIFSSAYAIADYLKKRK-PF-GK 107 (306)
T ss_pred CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccC----c--c--cccChHHHHHHHHHHhC-cC-CC
Confidence 6899999999999999999999999986655544 4455333221 1 1 11122223333333333 33 67
Q ss_pred cEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 336 EILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
.+..+|-..- -+..+++|+...+....
T Consensus 108 ~Vyvig~~gi-~~eL~~aG~~~~g~~~~ 134 (306)
T KOG2882|consen 108 KVYVIGEEGI-REELDEAGFEYFGGGPD 134 (306)
T ss_pred eEEEecchhh-hHHHHHcCceeecCCCC
Confidence 8888886541 23456778776655443
No 259
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=82.59 E-value=1.6 Score=40.94 Aligned_cols=44 Identities=14% Similarity=0.194 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 318 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 318 ~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
+-.....++++++++ +++++.+|||.+|+..- ..+.+.|.|.+.
T Consensus 166 K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 166 KGAALRYLMERWGIP-PEQVLVAGDSGNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp HHHHHHHHHHHHT---GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred HHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence 457889999999998 99999999999998766 788888888764
No 260
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=81.93 E-value=2.3 Score=40.20 Aligned_cols=40 Identities=13% Similarity=0.129 Sum_probs=35.8
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCC
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG 299 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~ 299 (383)
..+.+.++|++|+++|++++|+|+.+...+...++.+++.
T Consensus 22 ~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 22 SYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 5578999999999999999999999999999999998543
No 261
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=81.92 E-value=7.7 Score=37.74 Aligned_cols=87 Identities=14% Similarity=0.145 Sum_probs=54.7
Q ss_pred ccccCCCHHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHhhcCCCCccc----------ceeeeeccCCCCCCCHHHHHHH
Q 016771 257 EGEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRK----------YLSGFFDTAVGNKRETPSYVEI 325 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G-~~l~IvTn~~~~~~~~~l~~~~~~~l~~----------~v~~~~d~~~~~KP~p~~~~~~ 325 (383)
..+++||+..+.+.|.+.| .++.-+||++......+-+-+...++.. +++.++.+...+|- .....+
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~--~~l~ni 271 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAARKG--QSLRNI 271 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhhhcc--cHHHHH
Confidence 4589999999999999998 8999999998665433322222111211 12222222223343 445667
Q ss_pred HHHcCCCCCCcEEEEecCH-HhHH
Q 016771 326 TNSLGVDKPSEILFVTDVY-QEAT 348 (383)
Q Consensus 326 ~~~l~v~~p~e~l~VGDs~-~Di~ 348 (383)
+.++. ....+.||||- .|.+
T Consensus 272 l~~~p---~~kfvLVGDsGE~Dpe 292 (373)
T COG4850 272 LRRYP---DRKFVLVGDSGEHDPE 292 (373)
T ss_pred HHhCC---CceEEEecCCCCcCHH
Confidence 77765 45899999996 6654
No 262
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=81.64 E-value=1.4 Score=41.18 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=20.2
Q ss_pred eEEEecccCCCccccc--cchhhhhHHHHHHHhHH
Q 016771 142 RCIVLDIEGTTTPISF--VSEVLFPYARDNVGKHL 174 (383)
Q Consensus 142 kaVlFDlDGTL~d~~~--v~~~l~~~~~~~~~~~l 174 (383)
++++||+||||++... -...+-+...+.+.+..
T Consensus 4 ~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~ 38 (244)
T TIGR00685 4 RAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLA 38 (244)
T ss_pred EEEEEecCccccCCcCCCcccCCCHHHHHHHHHHH
Confidence 6899999999998521 11123344555555544
No 263
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=81.28 E-value=2.6 Score=39.99 Aligned_cols=14 Identities=29% Similarity=0.503 Sum_probs=12.6
Q ss_pred eEEEecccCCCccc
Q 016771 142 RCIVLDIEGTTTPI 155 (383)
Q Consensus 142 kaVlFDlDGTL~d~ 155 (383)
.+|+||+||||++.
T Consensus 15 ~li~~D~DGTLl~~ 28 (266)
T PRK10187 15 YAWFFDLDGTLAEI 28 (266)
T ss_pred EEEEEecCCCCCCC
Confidence 69999999999984
No 264
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=78.35 E-value=10 Score=31.93 Aligned_cols=83 Identities=17% Similarity=0.097 Sum_probs=54.6
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHhhcCCCCcc---cceeeeecc---CCCCCCCHHHHHHHHHHcC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGS-RLAQRLIFGNSNYGDLR---KYLSGFFDT---AVGNKRETPSYVEITNSLG 330 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~-~~~~~~~l~~~~~~~l~---~~v~~~~d~---~~~~KP~p~~~~~~~~~l~ 330 (383)
...|++++..|..|+++|+.++++|++. .+.+...|+.+.+..-. +..-. |+. ..+.| -..|..+-+..+
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~-ft~~~~g~gsk--lghfke~~n~s~ 119 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEE-FTFEAVGDGSK--LGHFKEFTNNSN 119 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhc-CceeeecCccc--chhHHHHhhccC
Confidence 3589999999999999999999999985 55666777776432111 11111 111 11233 355677777778
Q ss_pred CCCCCcEEEEecCH
Q 016771 331 VDKPSEILFVTDVY 344 (383)
Q Consensus 331 v~~p~e~l~VGDs~ 344 (383)
.. -.+..+..|..
T Consensus 120 ~~-~k~~~~fdDes 132 (144)
T KOG4549|consen 120 SI-EKNKQVFDDES 132 (144)
T ss_pred cc-hhceeeecccc
Confidence 77 66777777654
No 265
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=76.62 E-value=1.3 Score=40.22 Aligned_cols=17 Identities=29% Similarity=0.176 Sum_probs=14.6
Q ss_pred CCeEEEecccCCCcccc
Q 016771 140 FPRCIVLDIEGTTTPIS 156 (383)
Q Consensus 140 ~ikaVlFDlDGTL~d~~ 156 (383)
..|++|+|||+||++..
T Consensus 20 ~kklLVLDLDeTLvh~~ 36 (195)
T TIGR02245 20 GKKLLVLDIDYTLFDHR 36 (195)
T ss_pred CCcEEEEeCCCceEccc
Confidence 35899999999999863
No 266
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=76.05 E-value=5.2 Score=36.29 Aligned_cols=37 Identities=11% Similarity=0.104 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCC
Q 016771 262 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 298 (383)
Q Consensus 262 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~ 298 (383)
+.+.++|+.|+++|++++++|+.+...++..++.+++
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~ 55 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGL 55 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 3478999999999999999999999999999999854
No 267
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=75.46 E-value=9.2 Score=36.92 Aligned_cols=38 Identities=16% Similarity=0.255 Sum_probs=31.9
Q ss_pred ccccCCCHHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHh
Q 016771 257 EGEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFG 294 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G-~~l~IvTn~~~~~~~~~l~ 294 (383)
...++|...++++.+++.| ++++|+||++...+...+.
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~~L~ 128 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLEELK 128 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHHHhc
Confidence 3579999999999999999 7999999999855554443
No 268
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=73.88 E-value=6.3 Score=36.68 Aligned_cols=39 Identities=21% Similarity=0.194 Sum_probs=34.9
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCC
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 298 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~ 298 (383)
+-+...+.|++|+++|++++++|+.+...+...++.++.
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~ 55 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGL 55 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 557889999999999999999999999998888888843
No 269
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=72.91 E-value=55 Score=30.75 Aligned_cols=97 Identities=15% Similarity=0.132 Sum_probs=63.8
Q ss_pred ccCCCHHHHHHHHHhC---CCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 259 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~---G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
.++|+..++++..+.. |+.+.-+++.+....+.+.+ ++..-+.+ ...-..+ ...-.+|+.+..+.+..++
T Consensus 104 ~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~-~G~~~vmP-lg~pIGs-g~Gi~~~~~I~~I~e~~~v---- 176 (248)
T cd04728 104 TLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED-AGCAAVMP-LGSPIGS-GQGLLNPYNLRIIIERADV---- 176 (248)
T ss_pred ccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH-cCCCEeCC-CCcCCCC-CCCCCCHHHHHHHHHhCCC----
Confidence 6899999999998887 99888555556655555443 33322211 0010011 1233358888877776443
Q ss_pred cEEEEe---cCHHhHHHHHHcCCcEEEEeCC
Q 016771 336 EILFVT---DVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 336 e~l~VG---Ds~~Di~aA~~aG~~~i~v~~~ 363 (383)
.++++ .++.|+..|.+.|...+.+.+.
T Consensus 177 -pVI~egGI~tpeda~~AmelGAdgVlV~SA 206 (248)
T cd04728 177 -PVIVDAGIGTPSDAAQAMELGADAVLLNTA 206 (248)
T ss_pred -cEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 36666 4569999999999999999876
No 270
>PRK08324 short chain dehydrogenase; Validated
Probab=72.85 E-value=18 Score=39.06 Aligned_cols=53 Identities=17% Similarity=0.294 Sum_probs=47.2
Q ss_pred CCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 016771 54 YPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNH 106 (383)
Q Consensus 54 ~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~~~~~~~ 106 (383)
.|..+.+||.|-|+++||.|...|+...+.++.+++....+..+|.-..++..
T Consensus 344 ~~~p~~~l~~g~g~~~~g~~~~~a~~~~d~~~~~~~~~~~a~~~~~~~~l~~~ 396 (681)
T PRK08324 344 DPNPRVVLIPGLGMFSFGKDKKTARVAADIYENAINVMRGAEAVGRYEPLSEQ 396 (681)
T ss_pred CCCCeEEEECCCceEEeCCCHHHhhhhHHHHHHHHHHHhhhhhcCCccCCChh
Confidence 35679999999999999999999999999999999999999999977666643
No 271
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=72.78 E-value=1.7 Score=38.27 Aligned_cols=13 Identities=38% Similarity=0.583 Sum_probs=11.9
Q ss_pred eEEEecccCCCcc
Q 016771 142 RCIVLDIEGTTTP 154 (383)
Q Consensus 142 kaVlFDlDGTL~d 154 (383)
|+++||.||||+.
T Consensus 2 ~~~~~D~Dgtl~~ 14 (176)
T TIGR00213 2 KAIFLDRDGTINI 14 (176)
T ss_pred CEEEEeCCCCEeC
Confidence 7899999999994
No 272
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=70.79 E-value=7.5 Score=35.15 Aligned_cols=39 Identities=15% Similarity=0.066 Sum_probs=35.0
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCC
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 298 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~ 298 (383)
+.|...+.|++|+++|++++++|+.+...++.+++.++.
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~ 57 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGT 57 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCC
Confidence 567889999999999999999999999988888888854
No 273
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=70.56 E-value=49 Score=32.38 Aligned_cols=94 Identities=18% Similarity=0.176 Sum_probs=66.1
Q ss_pred ccCCCHHHHHHHHHhC---CCeEEEEcCCcHHHHHHHHhhcCCC---CcccceeeeeccCCCCCCCHHHHHHHHHHcCCC
Q 016771 259 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYG---DLRKYLSGFFDTAVGNKRETPSYVEITNSLGVD 332 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~---G~~l~IvTn~~~~~~~~~l~~~~~~---~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~ 332 (383)
.++|+..++++..+.. |+.+.++++.+....+++.+ ++.. .+...|.+ ...-.+|+.++.+.+...+.
T Consensus 178 ~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~-~g~~avmPl~~pIGs-----g~gv~~p~~i~~~~e~~~vp 251 (326)
T PRK11840 178 TLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED-AGAVAVMPLGAPIGS-----GLGIQNPYTIRLIVEGATVP 251 (326)
T ss_pred CcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh-cCCEEEeeccccccC-----CCCCCCHHHHHHHHHcCCCc
Confidence 6889999999998887 99997777777766665544 3321 11111211 12233889999999885443
Q ss_pred CCCcEEEEecC---HHhHHHHHHcCCcEEEEeCC
Q 016771 333 KPSEILFVTDV---YQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 333 ~p~e~l~VGDs---~~Di~aA~~aG~~~i~v~~~ 363 (383)
++||-. +.|+..|.+.|...++++.+
T Consensus 252 -----VivdAGIg~~sda~~AmelGadgVL~nSa 280 (326)
T PRK11840 252 -----VLVDAGVGTASDAAVAMELGCDGVLMNTA 280 (326)
T ss_pred -----EEEeCCCCCHHHHHHHHHcCCCEEEEcce
Confidence 667744 48999999999999999876
No 274
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=70.44 E-value=4.4 Score=35.54 Aligned_cols=30 Identities=23% Similarity=0.221 Sum_probs=20.7
Q ss_pred CCCeEEEecccCCCccccccchhhhhHHHHHH
Q 016771 139 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNV 170 (383)
Q Consensus 139 ~~ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~ 170 (383)
..+++|+||+||||++.... .++|.+.+.+
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~~--~~~pgv~e~L 52 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDHN--EAYPALRDWI 52 (170)
T ss_pred CCCCEEEEecCCccccCCCC--CcChhHHHHH
Confidence 46899999999999975421 2455554443
No 275
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=69.97 E-value=11 Score=41.62 Aligned_cols=47 Identities=15% Similarity=0.219 Sum_probs=37.4
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-HhHHHHHHcCCcEEEEe
Q 016771 312 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISI 361 (383)
Q Consensus 312 ~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs~-~Di~aA~~aG~~~i~v~ 361 (383)
....||+...-.+.++++|++ -+++-||.. .-...|++.|+..|...
T Consensus 721 ~D~vr~~a~~av~~Lk~~Gi~---v~mLTGDn~~aA~svA~~VGi~~V~ae 768 (951)
T KOG0207|consen 721 EDQVRPDAALAVAELKSMGIK---VVMLTGDNDAAARSVAQQVGIDNVYAE 768 (951)
T ss_pred ccccchhHHHHHHHHHhcCce---EEEEcCCCHHHHHHHHHhhCcceEEec
Confidence 345688887777889999987 788889998 67888999998776543
No 276
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=69.50 E-value=5.8 Score=42.18 Aligned_cols=42 Identities=21% Similarity=0.102 Sum_probs=37.5
Q ss_pred ccccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcC
Q 016771 255 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 297 (383)
Q Consensus 255 ~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~ 297 (383)
...+++.|++.+||+++.+. |.++|+|-+.+.++..+.+-+.
T Consensus 197 ~~~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liD 238 (635)
T KOG0323|consen 197 EYLVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLID 238 (635)
T ss_pred eEEEEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhC
Confidence 44578999999999999976 9999999999999999988773
No 277
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=69.50 E-value=4.3 Score=45.01 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=26.6
Q ss_pred HHHHHHH---HHcCCCCCCcEEEEecCHHhHHHHHHcC
Q 016771 320 PSYVEIT---NSLGVDKPSEILFVTDVYQEATAAKAAG 354 (383)
Q Consensus 320 ~~~~~~~---~~l~v~~p~e~l~VGDs~~Di~aA~~aG 354 (383)
.....++ +.+|.. ++.+++|||+.+|..+-+.++
T Consensus 765 ~Al~~Ll~~~~~~g~~-~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 765 LVAKRLLSIMQERGML-PDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred HHHHHHHHHHHhcCCC-cccEEEEcCCccHHHHHHHhh
Confidence 4455554 456887 999999999999988877765
No 278
>PLN03017 trehalose-phosphatase
Probab=68.75 E-value=2.7 Score=41.85 Aligned_cols=13 Identities=46% Similarity=0.876 Sum_probs=0.0
Q ss_pred EEEecccCCCccc
Q 016771 143 CIVLDIEGTTTPI 155 (383)
Q Consensus 143 aVlFDlDGTL~d~ 155 (383)
+|+||+||||++.
T Consensus 113 llflD~DGTL~Pi 125 (366)
T PLN03017 113 VMFLDYDGTLSPI 125 (366)
T ss_pred EEEEecCCcCcCC
No 279
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=67.76 E-value=3.6 Score=41.48 Aligned_cols=19 Identities=32% Similarity=0.392 Sum_probs=15.8
Q ss_pred CCeEEEecccCCCcccccc
Q 016771 140 FPRCIVLDIEGTTTPISFV 158 (383)
Q Consensus 140 ~ikaVlFDlDGTL~d~~~v 158 (383)
..|.|+||||||++-+.++
T Consensus 374 n~kiVVsDiDGTITkSD~~ 392 (580)
T COG5083 374 NKKIVVSDIDGTITKSDAL 392 (580)
T ss_pred CCcEEEEecCCcEEehhhH
Confidence 4589999999999987643
No 280
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=67.36 E-value=12 Score=34.92 Aligned_cols=38 Identities=18% Similarity=0.222 Sum_probs=33.9
Q ss_pred CCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCC
Q 016771 261 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 298 (383)
Q Consensus 261 ~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~ 298 (383)
.+...++|++|+++|++++++|+.+...+..+++.+++
T Consensus 18 ~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~ 55 (256)
T TIGR01486 18 WGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGL 55 (256)
T ss_pred chHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 34588999999999999999999999999999998853
No 281
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=66.98 E-value=11 Score=34.26 Aligned_cols=40 Identities=18% Similarity=0.038 Sum_probs=34.8
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCC
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG 299 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~ 299 (383)
+-|.+.+.|++|+++|++++|+|..+...+...++.+++.
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 4568889999999999999999999999888888888543
No 282
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=66.96 E-value=66 Score=26.97 Aligned_cols=98 Identities=13% Similarity=0.195 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHhCCCeEEEEcCCcHHHH-HHHHhhc----CCCCcc-cceeeeeccC-----CCCCCCHHHHHHHHHHcC
Q 016771 262 DDVPEALEKWHSLGTKVYIYSSGSRLAQ-RLIFGNS----NYGDLR-KYLSGFFDTA-----VGNKRETPSYVEITNSLG 330 (383)
Q Consensus 262 pgv~e~L~~L~~~G~~l~IvTn~~~~~~-~~~l~~~----~~~~l~-~~v~~~~d~~-----~~~KP~p~~~~~~~~~l~ 330 (383)
..+.+.+....++|-+++++-|+..... .....++ +..... +.+.. .+.. ...-.++.....+++.+.
T Consensus 22 ~~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (138)
T PF13580_consen 22 EKAADLIAEALRNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIAL-NDDALTAISNDLEYDEGFARQLLALYD 100 (138)
T ss_dssp HHHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEET-TSTHHHHHHHHTTGGGTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCccccccccc-ccchHhhhhcccchhhHHHHHHHHHcC
Confidence 3555666666677889999999976432 2222222 111111 11111 0100 011223455677777888
Q ss_pred CCCCCcEEEE----ecCHH---hHHHHHHcCCcEEEEe
Q 016771 331 VDKPSEILFV----TDVYQ---EATAAKAAGLEVVISI 361 (383)
Q Consensus 331 v~~p~e~l~V----GDs~~---Di~aA~~aG~~~i~v~ 361 (383)
+. |.+++++ |.+++ -++.|++.||.+|.++
T Consensus 101 ~~-~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 101 IR-PGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp ---TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred CC-CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 88 9999988 55553 5667788899999876
No 283
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=66.05 E-value=12 Score=33.76 Aligned_cols=38 Identities=21% Similarity=0.182 Sum_probs=33.7
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcC
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 297 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~ 297 (383)
+.|.+.+.|++|+++|++++++|..+......+++.++
T Consensus 16 i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~ 53 (225)
T TIGR01482 16 INESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIG 53 (225)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhC
Confidence 45678899999999999999999999998888888884
No 284
>PLN02151 trehalose-phosphatase
Probab=65.83 E-value=3.3 Score=41.05 Aligned_cols=13 Identities=46% Similarity=0.876 Sum_probs=0.0
Q ss_pred EEEecccCCCccc
Q 016771 143 CIVLDIEGTTTPI 155 (383)
Q Consensus 143 aVlFDlDGTL~d~ 155 (383)
+++||+||||++.
T Consensus 100 ll~lDyDGTL~PI 112 (354)
T PLN02151 100 VMFLDYDGTLSPI 112 (354)
T ss_pred EEEEecCccCCCC
No 285
>PRK06769 hypothetical protein; Validated
Probab=65.70 E-value=4.7 Score=35.48 Aligned_cols=16 Identities=25% Similarity=0.214 Sum_probs=13.8
Q ss_pred CCeEEEecccCCCccc
Q 016771 140 FPRCIVLDIEGTTTPI 155 (383)
Q Consensus 140 ~ikaVlFDlDGTL~d~ 155 (383)
.+|+|+||.||||...
T Consensus 3 ~~~~~~~d~d~~~~~~ 18 (173)
T PRK06769 3 NIQAIFIDRDGTIGGD 18 (173)
T ss_pred CCcEEEEeCCCcccCC
Confidence 5899999999999643
No 286
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=65.54 E-value=5.7 Score=36.03 Aligned_cols=29 Identities=24% Similarity=0.312 Sum_probs=19.2
Q ss_pred CeEEEecccCCCccccccchhhhhHHHHHHHh
Q 016771 141 PRCIVLDIEGTTTPISFVSEVLFPYARDNVGK 172 (383)
Q Consensus 141 ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~~~ 172 (383)
-..++||.||||+..+.. +.|-+.+.+..
T Consensus 11 ~~l~lfdvdgtLt~~r~~---~~~e~~~~l~~ 39 (252)
T KOG3189|consen 11 ETLCLFDVDGTLTPPRQK---VTPEMLEFLQK 39 (252)
T ss_pred ceEEEEecCCcccccccc---CCHHHHHHHHH
Confidence 358999999999987532 34444444433
No 287
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=64.09 E-value=3.7 Score=39.09 Aligned_cols=14 Identities=50% Similarity=0.729 Sum_probs=0.0
Q ss_pred eEEEecccCCCccc
Q 016771 142 RCIVLDIEGTTTPI 155 (383)
Q Consensus 142 kaVlFDlDGTL~d~ 155 (383)
++++||+||||++.
T Consensus 19 ~~~~lDyDGTl~~i 32 (266)
T COG1877 19 RLLFLDYDGTLTEI 32 (266)
T ss_pred eEEEEecccccccc
No 288
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=63.02 E-value=16 Score=34.12 Aligned_cols=39 Identities=21% Similarity=0.261 Sum_probs=34.8
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCC
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 298 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~ 298 (383)
+.|...+.|++|+++|++++|+|..+...+...++.++.
T Consensus 21 i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (272)
T PRK10530 21 ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALAL 59 (272)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence 567789999999999999999999999988888888854
No 289
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=62.27 E-value=12 Score=34.84 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=36.6
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCC
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD 300 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~ 300 (383)
.-|.+.++|++++++|++++|+|..+...++.+++.++...
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 55788899999999999999999999999999999996544
No 290
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=62.13 E-value=17 Score=30.44 Aligned_cols=13 Identities=31% Similarity=0.570 Sum_probs=11.8
Q ss_pred eEEEecccCCCcc
Q 016771 142 RCIVLDIEGTTTP 154 (383)
Q Consensus 142 kaVlFDlDGTL~d 154 (383)
|+|+||+||||+.
T Consensus 2 K~i~~DiDGTL~~ 14 (126)
T TIGR01689 2 KRLVMDLDNTITL 14 (126)
T ss_pred CEEEEeCCCCccc
Confidence 8999999999964
No 291
>PRK00208 thiG thiazole synthase; Reviewed
Probab=62.08 E-value=1.2e+02 Score=28.47 Aligned_cols=97 Identities=15% Similarity=0.119 Sum_probs=61.9
Q ss_pred ccCCCHHHHHHHHHhC---CCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 259 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~---G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
.++|+..++++..+.. |+.+.-+++.+....+++. .++..-+.+ ...-..+ ...-.+|+....+.+..++
T Consensus 104 ~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~-~~G~~~vmP-lg~pIGs-g~gi~~~~~i~~i~e~~~v---- 176 (250)
T PRK00208 104 TLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLE-EAGCAAVMP-LGAPIGS-GLGLLNPYNLRIIIEQADV---- 176 (250)
T ss_pred CCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HcCCCEeCC-CCcCCCC-CCCCCCHHHHHHHHHhcCC----
Confidence 5789999999998887 9988844554555555444 343322211 0010011 1233357887777766443
Q ss_pred cEEEEe---cCHHhHHHHHHcCCcEEEEeCC
Q 016771 336 EILFVT---DVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 336 e~l~VG---Ds~~Di~aA~~aG~~~i~v~~~ 363 (383)
.++++ .++.|+..|.+.|...+++.+.
T Consensus 177 -pVIveaGI~tpeda~~AmelGAdgVlV~SA 206 (250)
T PRK00208 177 -PVIVDAGIGTPSDAAQAMELGADAVLLNTA 206 (250)
T ss_pred -eEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 36666 4468999999999999999886
No 292
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=61.52 E-value=6.4 Score=38.27 Aligned_cols=50 Identities=14% Similarity=0.095 Sum_probs=39.5
Q ss_pred CCCCCHHHHHHHHH--------HcCCCCCCcEEEEecCH-HhHHHHH---------------HcCCcEEEEeCC
Q 016771 314 GNKRETPSYVEITN--------SLGVDKPSEILFVTDVY-QEATAAK---------------AAGLEVVISIRP 363 (383)
Q Consensus 314 ~~KP~p~~~~~~~~--------~l~v~~p~e~l~VGDs~-~Di~aA~---------------~aG~~~i~v~~~ 363 (383)
..||.+-.|..+.. +.+..+++.+.||||.+ .|+..|+ .-||.+|+|..|
T Consensus 269 ~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TG 342 (389)
T KOG1618|consen 269 LGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTG 342 (389)
T ss_pred cCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeee
Confidence 47999888877632 22344578999999999 9999997 778899999876
No 293
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=61.32 E-value=9.3 Score=30.81 Aligned_cols=54 Identities=20% Similarity=0.270 Sum_probs=34.4
Q ss_pred EeeecCC---CCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHH
Q 016771 31 VPIIENT---AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAI 92 (383)
Q Consensus 31 ipv~~n~---~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~ 92 (383)
||||+=. .+-.++++.|.+++. ..-.+.|.|||+-. +...+..++..-.|++-.
T Consensus 1 iPvIDls~~~~~~~~~~~~l~~A~~---~~GFf~l~nhGi~~-----~l~~~~~~~~~~fF~lp~ 57 (116)
T PF14226_consen 1 IPVIDLSPDPADREEVAEQLRDACE---EWGFFYLVNHGIPQ-----ELIDRVFAAAREFFALPL 57 (116)
T ss_dssp --EEEHGGCHHHHHHHHHHHHHHHH---HTSEEEEESSSSSH-----HHHHHHHHHHHHHHCSHH
T ss_pred CCeEECCCCCccHHHHHHHHHHHHH---hCCEEEEecccccc-----hhhHHHHHHHHHHHHhhH
Confidence 6888776 334567788888887 45678899999753 444555555555555433
No 294
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=61.02 E-value=4.8 Score=35.17 Aligned_cols=14 Identities=21% Similarity=0.389 Sum_probs=12.8
Q ss_pred eEEEecccCCCccc
Q 016771 142 RCIVLDIEGTTTPI 155 (383)
Q Consensus 142 kaVlFDlDGTL~d~ 155 (383)
|+++||.||||.+.
T Consensus 2 ~~~~~d~dg~l~~~ 15 (161)
T TIGR01261 2 KILFIDRDGTLIEE 15 (161)
T ss_pred CEEEEeCCCCcccc
Confidence 78999999999985
No 295
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=60.92 E-value=34 Score=34.16 Aligned_cols=44 Identities=18% Similarity=0.191 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 318 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 318 ~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
+-..|++|.+++|-+ -.-+.|||......+|++..|.+.-+...
T Consensus 410 KescFerI~~RFg~K--~~yvvIgdG~eee~aAK~ln~PfwrI~~h 453 (468)
T KOG3107|consen 410 KESCFERIQSRFGRK--VVYVVIGDGVEEEQAAKALNMPFWRISSH 453 (468)
T ss_pred HHHHHHHHHHHhCCc--eEEEEecCcHHHHHHHHhhCCceEeeccC
Confidence 458899999999964 67788999999999999999998777653
No 296
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=60.29 E-value=5.4 Score=38.82 Aligned_cols=16 Identities=25% Similarity=0.221 Sum_probs=14.1
Q ss_pred CCeEEEecccCCCccc
Q 016771 140 FPRCIVLDIEGTTTPI 155 (383)
Q Consensus 140 ~ikaVlFDlDGTL~d~ 155 (383)
.+|+|+||+|+||..-
T Consensus 2 ~~k~~v~DlDnTlw~g 17 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGG 17 (320)
T ss_pred CeEEEEEcCCCCCCCC
Confidence 4799999999999864
No 297
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=60.14 E-value=13 Score=33.13 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=33.9
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhc
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 296 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~ 296 (383)
.+-|.+.+.|++|+++|++++++|+.+...+..+++.+
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 54 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQL 54 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence 35678999999999999999999999999999888865
No 298
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=60.00 E-value=8.5 Score=35.48 Aligned_cols=39 Identities=18% Similarity=0.219 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHcCCC--CCCcEEEEecCHHhHHHHHHcCCc
Q 016771 318 ETPSYVEITNSLGVD--KPSEILFVTDVYQEATAAKAAGLE 356 (383)
Q Consensus 318 ~p~~~~~~~~~l~v~--~p~e~l~VGDs~~Di~aA~~aG~~ 356 (383)
+-.....++++++.. .+.-++|+||...|-.+-+.+.-.
T Consensus 166 KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 166 KGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALREL 206 (235)
T ss_dssp HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS
T ss_pred hHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhc
Confidence 446677777776641 156899999999887777766543
No 299
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=59.88 E-value=5.5 Score=34.73 Aligned_cols=16 Identities=31% Similarity=0.596 Sum_probs=13.7
Q ss_pred eEEEecccCCCccccc
Q 016771 142 RCIVLDIEGTTTPISF 157 (383)
Q Consensus 142 kaVlFDlDGTL~d~~~ 157 (383)
+.+++|+|+||+.++.
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 5799999999998753
No 300
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=59.38 E-value=10 Score=36.37 Aligned_cols=25 Identities=12% Similarity=0.197 Sum_probs=20.4
Q ss_pred eEEEeeecCCCCHHHHHHHHHHHHH
Q 016771 28 ELVVPIIENTAYENELTDSLAKAID 52 (383)
Q Consensus 28 ~~~ipv~~n~~~~~~l~~~~~~~~~ 52 (383)
...+=+|.-..+|.++=..+..+++
T Consensus 54 ~Y~~~~~~~~D~M~diR~~lK~~fk 78 (297)
T PF05152_consen 54 NYKMQIFKCKDDMRDIRKNLKTAFK 78 (297)
T ss_pred ceEEEEEEcCCcHHHHHHHHHHHhc
Confidence 3447788888999999999998886
No 301
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=58.97 E-value=14 Score=33.96 Aligned_cols=37 Identities=16% Similarity=0.188 Sum_probs=31.4
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhc
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 296 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~ 296 (383)
..||+.+.|++|+.++.++=.+||...+.-+.+.+++
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 7899999999999999999999999876665555544
No 302
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=58.62 E-value=5.3 Score=34.11 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=13.2
Q ss_pred eEEEecccCCCcccc
Q 016771 142 RCIVLDIEGTTTPIS 156 (383)
Q Consensus 142 kaVlFDlDGTL~d~~ 156 (383)
+.+++|+||||+++.
T Consensus 3 ~~lvldld~tl~~~~ 17 (148)
T smart00577 3 KTLVLDLDETLVHST 17 (148)
T ss_pred cEEEEeCCCCeECCC
Confidence 578999999999974
No 303
>COG3347 Uncharacterized conserved protein [Function unknown]
Probab=58.42 E-value=36 Score=33.96 Aligned_cols=59 Identities=15% Similarity=0.239 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhC---------CCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016771 42 ELTDSLAKAIDAY---------PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 100 (383)
Q Consensus 42 ~l~~~~~~~~~~~---------p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~ 100 (383)
..++..+++++++ |....+||.+=|+++.|++-..|+-.-++++-..+..-.+-.+|.=
T Consensus 314 ~y~~~Y~aYf~rn~~~~~~m~dp~P~viLipG~Gm~~~g~~~a~A~i~~d~~~~ai~v~~gA~~~g~~ 381 (404)
T COG3347 314 AYAEEYQAYFERNKAEGKTMLDPAPRVILIPGLGMLTAGKSAAGARIMGDLYEDAIAVVRGAEALGYY 381 (404)
T ss_pred HHHHHHHHHHHhcccccccccCCCCcEEEecCCceeeeccchhhHHHHHHHHHHHHHHhhhhhhhccc
Confidence 3445566677654 5578999999999999999999999999999999888877777643
No 304
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=57.88 E-value=1.3e+02 Score=28.41 Aligned_cols=97 Identities=12% Similarity=0.074 Sum_probs=68.2
Q ss_pred ccCCCHHHHHHH---HHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 259 EVFDDVPEALEK---WHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 259 ~~~pgv~e~L~~---L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
.++|+..++|+. |-+.|+.+.-++|.+....+++. ..|+.-+-+.=+.+ . ....-.+|..++.++++..+.
T Consensus 118 ~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLe-d~Gc~aVMPlgsPI-G-Sg~Gl~n~~~l~~i~e~~~vp--- 191 (267)
T CHL00162 118 YLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLE-DIGCATVMPLGSPI-G-SGQGLQNLLNLQIIIENAKIP--- 191 (267)
T ss_pred ccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHH-HcCCeEEeeccCcc-c-CCCCCCCHHHHHHHHHcCCCc---
Confidence 688999988875 66789999999999887776654 44322222211110 0 123456888888888876654
Q ss_pred cEEEEec---CHHhHHHHHHcCCcEEEEeCC
Q 016771 336 EILFVTD---VYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 336 e~l~VGD---s~~Di~aA~~aG~~~i~v~~~ 363 (383)
++||- ++.|+..|.+.|+..++++.+
T Consensus 192 --VivdAGIgt~sDa~~AmElGaDgVL~nSa 220 (267)
T CHL00162 192 --VIIDAGIGTPSEASQAMELGASGVLLNTA 220 (267)
T ss_pred --EEEeCCcCCHHHHHHHHHcCCCEEeecce
Confidence 55654 358999999999999999876
No 305
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=57.64 E-value=5 Score=44.27 Aligned_cols=97 Identities=18% Similarity=0.157 Sum_probs=0.0
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHH-HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccc
Q 016771 33 IIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWIN-AKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRN 111 (383)
Q Consensus 33 v~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~-a~~~~e~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 111 (383)
++-|-.|..++|+.+.++|.-.+.-..-..+.+=-++-..|+.. |...++.++-..+-.-.... ...+.-++..
T Consensus 423 llVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~-----~~~~~l~~~~ 497 (797)
T PLN03063 423 LLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTR-----NIPLELPEQD 497 (797)
T ss_pred EEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhccc-----CCCCCCCHHH
Q ss_pred cccccCCCCCcccccccccCCCCCCCCCCCeEEEecccCCCcc
Q 016771 112 FKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTP 154 (383)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ikaVlFDlDGTL~d 154 (383)
..--..++.. ++++||+||||++
T Consensus 498 ~~~~y~~a~~--------------------rll~LDyDGTL~~ 520 (797)
T PLN03063 498 VIQQYSKSNN--------------------RLLILGFYGTLTE 520 (797)
T ss_pred HHHHHHhccC--------------------eEEEEecCccccC
No 306
>PLN02334 ribulose-phosphate 3-epimerase
Probab=56.96 E-value=1.4e+02 Score=27.30 Aligned_cols=98 Identities=11% Similarity=-0.027 Sum_probs=59.2
Q ss_pred CCHHHHHHHHHhCCCeEEEEcCC--cHHHHHHHHhh--cCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcE
Q 016771 262 DDVPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGN--SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 337 (383)
Q Consensus 262 pgv~e~L~~L~~~G~~l~IvTn~--~~~~~~~~l~~--~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~ 337 (383)
+...+.++.+++.|.++++..|. +.+..+..++. . ++.- +..++......+..|..+..+.+-........+
T Consensus 102 d~~~~~~~~i~~~g~~iGls~~~~t~~~~~~~~~~~~~~---Dyi~-~~~v~pg~~~~~~~~~~~~~i~~~~~~~~~~~I 177 (229)
T PLN02334 102 IHLHRLIQQIKSAGMKAGVVLNPGTPVEAVEPVVEKGLV---DMVL-VMSVEPGFGGQSFIPSMMDKVRALRKKYPELDI 177 (229)
T ss_pred hhHHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHhccCC---CEEE-EEEEecCCCccccCHHHHHHHHHHHHhCCCCcE
Confidence 45678999999999999999983 45555555544 3 2221 122222122233445555554432222102346
Q ss_pred EEEe-cCHHhHHHHHHcCCcEEEEeCC
Q 016771 338 LFVT-DVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 338 l~VG-Ds~~Di~aA~~aG~~~i~v~~~ 363 (383)
+.+| =+..++....++|...+.+.+.
T Consensus 178 ~a~GGI~~e~i~~l~~aGad~vvvgsa 204 (229)
T PLN02334 178 EVDGGVGPSTIDKAAEAGANVIVAGSA 204 (229)
T ss_pred EEeCCCCHHHHHHHHHcCCCEEEEChH
Confidence 6664 5668999999999999988765
No 307
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=55.33 E-value=54 Score=36.25 Aligned_cols=96 Identities=18% Similarity=0.121 Sum_probs=62.3
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCccc---ceee-eecc---------------CCCCCCC
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK---YLSG-FFDT---------------AVGNKRE 318 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~---~v~~-~~d~---------------~~~~KP~ 318 (383)
.+..||+++.++.++.+|+++-.+|..+-...+.+...+|+..-.. .+.| -|.+ ..++-|.
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 4889999999999999999999999999999999888886432111 1111 0000 0112222
Q ss_pred H-HHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcE
Q 016771 319 T-PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 357 (383)
Q Consensus 319 p-~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~ 357 (383)
. ...-+.+++ . -+=+.+-||..||-.|-++|.+..
T Consensus 726 DK~lLVk~L~~---~-g~VVAVTGDGTNDaPALkeADVGl 761 (1034)
T KOG0204|consen 726 DKHLLVKGLIK---Q-GEVVAVTGDGTNDAPALKEADVGL 761 (1034)
T ss_pred hHHHHHHHHHh---c-CcEEEEecCCCCCchhhhhcccch
Confidence 1 222223332 1 234556689999999999998754
No 308
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=55.05 E-value=1.2e+02 Score=28.20 Aligned_cols=96 Identities=21% Similarity=0.131 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHhCCCeEEEEcCCc--HHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEE
Q 016771 262 DDVPEALEKWHSLGTKVYIYSSGS--RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILF 339 (383)
Q Consensus 262 pgv~e~L~~L~~~G~~l~IvTn~~--~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~ 339 (383)
+...++++.+++.|.+.+++-|.. .+..+.+++.. +.+-+++. ......+-.+.+...+.+--... ++..+.
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~---~~~l~msv--~~~~g~~~~~~~~~~i~~lr~~~-~~~~i~ 189 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLS---PLFIYYGL--RPATGVPLPVSVERNIKRVRNLV-GNKYLV 189 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhC---CCEEEEEe--CCCCCCCchHHHHHHHHHHHHhc-CCCCEE
Confidence 577889999999999988887763 44556666654 33223321 11112232333333332222232 334577
Q ss_pred EecCH---HhHHHHHHcCCcEEEEeCC
Q 016771 340 VTDVY---QEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 340 VGDs~---~Di~aA~~aG~~~i~v~~~ 363 (383)
||=+. .++..+.++|...+.+...
T Consensus 190 v~gGI~~~e~i~~~~~~gaD~vvvGSa 216 (244)
T PRK13125 190 VGFGLDSPEDARDALSAGADGVVVGTA 216 (244)
T ss_pred EeCCcCCHHHHHHHHHcCCCEEEECHH
Confidence 88655 7888888999999888654
No 309
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=53.88 E-value=19 Score=39.39 Aligned_cols=39 Identities=8% Similarity=0.118 Sum_probs=31.6
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhc
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 296 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~ 296 (383)
+++-|+++++++.|.+.+.++..+|..+.-..-..-+.+
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v 712 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEV 712 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehhee
Confidence 578899999999999999999999998755544444444
No 310
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=53.87 E-value=24 Score=34.52 Aligned_cols=29 Identities=24% Similarity=0.626 Sum_probs=25.9
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRL 287 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~ 287 (383)
-++|.+.++++.++++|+.+.|.||+...
T Consensus 142 lL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 142 TLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred cchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 46789999999999999999999999653
No 311
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=53.47 E-value=5.8 Score=44.29 Aligned_cols=97 Identities=18% Similarity=0.146 Sum_probs=0.0
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHH-HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccc
Q 016771 33 IIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWIN-AKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRN 111 (383)
Q Consensus 33 v~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~-a~~~~e~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 111 (383)
++-|--|..++|+.+.++|.-.+.-..-..+.+=-++-..|+.. |.+.+..++... +.-..+..+..+.++...-+..
T Consensus 507 llVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~-~~~~~~~~~~~~~l~~~~~~~~ 585 (934)
T PLN03064 507 ILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV-VEAQLRTRQVPPQLPPEDAIQR 585 (934)
T ss_pred EEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH-hhhhccccccCCCCCHHHHHHH
Q ss_pred cccccCCCCCcccccccccCCCCCCCCCCCeEEEecccCCCcc
Q 016771 112 FKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTP 154 (383)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ikaVlFDlDGTL~d 154 (383)
.+- +.. ++++||+||||++
T Consensus 586 y~~----a~~--------------------RLlfLDyDGTLap 604 (934)
T PLN03064 586 YLQ----SNN--------------------RLLILGFNATLTE 604 (934)
T ss_pred HHh----ccc--------------------eEEEEecCceecc
No 312
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=53.43 E-value=23 Score=32.82 Aligned_cols=38 Identities=16% Similarity=0.119 Sum_probs=33.3
Q ss_pred CHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCC
Q 016771 263 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD 300 (383)
Q Consensus 263 gv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~ 300 (383)
-+.+.+.+|++.|+++..+|+++...+..+-+.+++.+
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 45679999999999999999999999988888887664
No 313
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=51.89 E-value=33 Score=33.79 Aligned_cols=57 Identities=19% Similarity=0.251 Sum_probs=38.2
Q ss_pred EEeeecCC----CCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHH
Q 016771 30 VVPIIENT----AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL 94 (383)
Q Consensus 30 ~ipv~~n~----~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~ 94 (383)
.||||+=. .+-.++++.|.+|.. ..-.+.|.|||+ +.+.-.+..+...-.|++-...
T Consensus 26 ~iPvIDls~~~~~~~~~~~~~l~~Ac~---~~GFf~v~nHGi-----~~~l~~~~~~~~~~FF~LP~ee 86 (345)
T PLN02750 26 EIPVIDLSVSTSHDKTEVASKIGEACK---KWGFFQVINHGV-----PSELRQRVEKVAKEFFDQTTEE 86 (345)
T ss_pred CCCeEECCCCCcccHHHHHHHHHHHHH---hCCEEEEEcCCC-----CHHHHHHHHHHHHHHHcCCHHH
Confidence 59999853 455678888999987 445678889999 3444445555555556654444
No 314
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=51.52 E-value=1.8e+02 Score=27.33 Aligned_cols=97 Identities=14% Similarity=0.115 Sum_probs=60.1
Q ss_pred ccCCCHHHHHHH---HHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 259 EVFDDVPEALEK---WHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 259 ~~~pgv~e~L~~---L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
.++|+..++|+. |-+.|+.+.-++|.+....+++.+ .|+.-+-+.=+.+ . ....--+|..++.++++.++.
T Consensus 104 ~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akrL~d-~GcaavMPlgsPI-G-Sg~Gi~n~~~l~~i~~~~~vP--- 177 (247)
T PF05690_consen 104 TLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLED-AGCAAVMPLGSPI-G-SGRGIQNPYNLRIIIERADVP--- 177 (247)
T ss_dssp T--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHHHHH-TT-SEBEEBSSST-T-T---SSTHHHHHHHHHHGSSS---
T ss_pred CcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH-CCCCEEEeccccc-c-cCcCCCCHHHHHHHHHhcCCc---
Confidence 578999888875 667899999999988877766554 4322221111110 0 123456789999999999886
Q ss_pred cEEEEec---CHHhHHHHHHcCCcEEEEeCC
Q 016771 336 EILFVTD---VYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 336 e~l~VGD---s~~Di~aA~~aG~~~i~v~~~ 363 (383)
++|+- ++.|..-|.+.|+..|+++..
T Consensus 178 --vIvDAGiG~pSdaa~AMElG~daVLvNTA 206 (247)
T PF05690_consen 178 --VIVDAGIGTPSDAAQAMELGADAVLVNTA 206 (247)
T ss_dssp --BEEES---SHHHHHHHHHTT-SEEEESHH
T ss_pred --EEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 34442 458999999999999999754
No 315
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=51.22 E-value=14 Score=24.98 Aligned_cols=20 Identities=25% Similarity=0.395 Sum_probs=16.7
Q ss_pred cceeecCCHHHHHHHHH-HHH
Q 016771 66 GIYVWGDSWINAKTQAE-CYH 85 (383)
Q Consensus 66 G~~~wG~~~~~a~~~~e-~~e 85 (383)
|+.++|+|+++|++.+. +++
T Consensus 23 g~~t~G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 23 GCFTQGDTLEEALENAKEALE 43 (48)
T ss_dssp TCEEEESSHHHHHHHHHHHHH
T ss_pred ChhhcCCCHHHHHHHHHHHHH
Confidence 89999999999999854 344
No 316
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=50.11 E-value=15 Score=34.27 Aligned_cols=28 Identities=25% Similarity=0.306 Sum_probs=18.4
Q ss_pred CeEEEecccCCCccccccchhhhhHHHHHHHhHHh
Q 016771 141 PRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLS 175 (383)
Q Consensus 141 ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~~~~l~ 175 (383)
.+.++.|+||||++.. +.+.+.+.+++.
T Consensus 2 ~~ll~sDlD~Tl~~~~-------~~~~~~l~~~l~ 29 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGD-------DEALARLEELLE 29 (247)
T ss_dssp SEEEEEETBTTTBHCH-------HHHHHHHHHHHH
T ss_pred CEEEEEECCCCCcCCC-------HHHHHHHHHHHH
Confidence 3689999999999321 133455555555
No 317
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=48.93 E-value=1.7e+02 Score=27.53 Aligned_cols=98 Identities=12% Similarity=0.047 Sum_probs=55.9
Q ss_pred ccCCCHHHHHHHHHhCCCeEE-EEcCCc-HHHHHHHHhhcCCCCcccceeeeeccCCCC-CCCHHHHHH--HHHHcCCCC
Q 016771 259 EVFDDVPEALEKWHSLGTKVY-IYSSGS-RLAQRLIFGNSNYGDLRKYLSGFFDTAVGN-KRETPSYVE--ITNSLGVDK 333 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~-IvTn~~-~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~-KP~p~~~~~--~~~~l~v~~ 333 (383)
.+++...++++.+++.|...+ +++-.+ .+..+.+.+.. .++-.+++. ....+.. +-.+..... -+++. .
T Consensus 124 lp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~--~gfiy~vs~-~G~TG~~~~~~~~~~~~i~~lr~~--~- 197 (256)
T TIGR00262 124 LPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS--QGFVYLVSR-AGVTGARNRAASALNELVKRLKAY--S- 197 (256)
T ss_pred CChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC--CCCEEEEEC-CCCCCCcccCChhHHHHHHHHHhh--c-
Confidence 456788899999999998865 444433 44555666654 123323332 1112111 122333322 22332 1
Q ss_pred CCcEEEEec---CHHhHHHHHHcCCcEEEEeCC
Q 016771 334 PSEILFVTD---VYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 334 p~e~l~VGD---s~~Di~aA~~aG~~~i~v~~~ 363 (383)
+.-++||= ++.++..+.++|...+.|.+.
T Consensus 198 -~~pi~vgfGI~~~e~~~~~~~~GADgvVvGSa 229 (256)
T TIGR00262 198 -AKPVLVGFGISKPEQVKQAIDAGADGVIVGSA 229 (256)
T ss_pred -CCCEEEeCCCCCHHHHHHHHHcCCCEEEECHH
Confidence 22477774 457999999999999888653
No 318
>PF06378 DUF1071: Protein of unknown function (DUF1071); InterPro: IPR009425 This entry is represented by Bacteriophage bIL285, Orf14. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical bacterial and phage proteins of unknown function.
Probab=48.65 E-value=8.7 Score=33.73 Aligned_cols=47 Identities=13% Similarity=0.417 Sum_probs=34.7
Q ss_pred ceEEEeeecCC------CCHHHHHHHHHHHHHhCCCCeEEEEccccceee-cCCHHHHH
Q 016771 27 DELVVPIIENT------AYENELTDSLAKAIDAYPKATAVLVRNHGIYVW-GDSWINAK 78 (383)
Q Consensus 27 ~~~~ipv~~n~------~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~w-G~~~~~a~ 78 (383)
.+..+||.++. +++.++-..+.+.|- .|+-+.|=|+|+| |+|+.++.
T Consensus 82 ~~~~lPVMD~rNk~i~~p~~~dINka~~RclV-----KalA~~GLGLyiYaGEDlP~~~ 135 (164)
T PF06378_consen 82 YTMWLPVMDGRNKAIEKPTAFDINKAIMRCLV-----KALAMFGLGLYIYAGEDLPEAE 135 (164)
T ss_pred EEEEEeecCCCCCcccCcchhhhHHHHHHHHH-----HHHHHhCccceeeccCcCCCcc
Confidence 35668988874 667778788777775 4455578899999 99987543
No 319
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=47.92 E-value=2e+02 Score=27.00 Aligned_cols=89 Identities=13% Similarity=0.134 Sum_probs=55.8
Q ss_pred HHHHHhC-CCeEEEEcCCc---HHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEecC
Q 016771 268 LEKWHSL-GTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDV 343 (383)
Q Consensus 268 L~~L~~~-G~~l~IvTn~~---~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VGDs 343 (383)
|.+...+ ++.+-+++++. .+......... +..+.+-|.-+.+ -...-|-|..-+++++..|++ |++|||.
T Consensus 23 lDErAdRedI~vrv~gsGaKm~pe~~~~~~~~~-~~~~~pDf~i~is-PN~a~PGP~~ARE~l~~~~iP----~IvI~D~ 96 (277)
T PRK00994 23 LDERADREDIDVRVVGSGAKMGPEEVEEVVKKM-LEEWKPDFVIVIS-PNPAAPGPKKAREILKAAGIP----CIVIGDA 96 (277)
T ss_pred HHhhhcccCceEEEeccCCCCCHHHHHHHHHHH-HHhhCCCEEEEEC-CCCCCCCchHHHHHHHhcCCC----EEEEcCC
Confidence 3344444 78899999985 33333222221 0011221111111 234578888889999888886 9999999
Q ss_pred H--HhHHHHHHcCCcEEEEeC
Q 016771 344 Y--QEATAAKAAGLEVVISIR 362 (383)
Q Consensus 344 ~--~Di~aA~~aG~~~i~v~~ 362 (383)
+ .+..+-++.|+..|.+.-
T Consensus 97 p~~K~~d~l~~~g~GYIivk~ 117 (277)
T PRK00994 97 PGKKVKDAMEEQGLGYIIVKA 117 (277)
T ss_pred CccchHHHHHhcCCcEEEEec
Confidence 8 567888899999998874
No 320
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=47.74 E-value=17 Score=32.01 Aligned_cols=87 Identities=17% Similarity=0.148 Sum_probs=46.7
Q ss_pred CHHHHHHHHHhCCCeEEEEcCCcHHH-HHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 016771 263 DVPEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 341 (383)
Q Consensus 263 gv~e~L~~L~~~G~~l~IvTn~~~~~-~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VG 341 (383)
++.++|..++..+-++++++..+... ...+-+.++. ++..+. ++ +++-+..+++++.-. .--++||
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~-~i~~~~---~~-------~~~e~~~~i~~~~~~--G~~viVG 131 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGV-DIKIYP---YD-------SEEEIEAAIKQAKAE--GVDVIVG 131 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT--EEEEEE---ES-------SHHHHHHHHHHHHHT--T--EEEE
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCC-ceEEEE---EC-------CHHHHHHHHHHHHHc--CCcEEEC
Confidence 33444444555678999999876443 3333333321 111111 11 234445555544221 2237889
Q ss_pred cCHHhHHHHHHcCCcEEEEeCC
Q 016771 342 DVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 342 Ds~~Di~aA~~aG~~~i~v~~~ 363 (383)
++.. ...|++.|++++.+..+
T Consensus 132 g~~~-~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 132 GGVV-CRLARKLGLPGVLIESG 152 (176)
T ss_dssp SHHH-HHHHHHTTSEEEESS--
T ss_pred CHHH-HHHHHHcCCcEEEEEec
Confidence 9874 78999999999987654
No 321
>PHA02575 1 deoxynucleoside monophosphate kinase; Provisional
Probab=47.50 E-value=1.1e+02 Score=28.44 Aligned_cols=49 Identities=20% Similarity=0.270 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHH-Hc--CCCCCCcEEEEecCH--HhHHHHHHcCCcEEEEeCCC
Q 016771 316 KRETPSYVEITN-SL--GVDKPSEILFVTDVY--QEATAAKAAGLEVVISIRPG 364 (383)
Q Consensus 316 KP~p~~~~~~~~-~l--~v~~p~e~l~VGDs~--~Di~aA~~aG~~~i~v~~~~ 364 (383)
+-+|..|...+. ++ ...++...++|.|-- ++++.-++.|...|.+.|.+
T Consensus 134 ~~d~~~Wvr~a~~~~~~~~~~~~~~vVVTDVRf~nEie~lre~Gg~iV~V~R~~ 187 (227)
T PHA02575 134 NFNKMYWVKLFALKYLDKFKSDYDYFIVTDVRQDHEMELVRAMGATVIHVVRDT 187 (227)
T ss_pred ecCcCHhHHHHHHHHHHhhhccCCCEEEeCCCChhHHHHHHHcCCEEEEEecCC
Confidence 357777777553 32 122266799999985 99999999999999998874
No 322
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=46.62 E-value=86 Score=32.91 Aligned_cols=87 Identities=20% Similarity=0.155 Sum_probs=50.1
Q ss_pred CHHHHHHHHHhCCCeEEEEcCCcHHH-HHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 016771 263 DVPEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 341 (383)
Q Consensus 263 gv~e~L~~L~~~G~~l~IvTn~~~~~-~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VG 341 (383)
++...|...+..+-+++|++-.+... .+.+-.-+++ ++. .+.- . ..-+...-..-+++.|++ ++||
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~-~i~-~~~~--~----~~~e~~~~~~~l~~~G~~-----~viG 151 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNL-DIV-QRSY--V----TEEDARSCVNDLRARGIG-----AVVG 151 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCC-ceE-EEEe--c----CHHHHHHHHHHHHHCCCC-----EEEC
Confidence 55666666677777999999876443 3333333321 111 1111 1 111222233334445554 6789
Q ss_pred cCHHhHHHHHHcCCcEEEEeCC
Q 016771 342 DVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 342 Ds~~Di~aA~~aG~~~i~v~~~ 363 (383)
|... +..|+++||+.|.+..+
T Consensus 152 ~~~~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 152 AGLI-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred ChHH-HHHHHHcCCceEEEecH
Confidence 9965 78899999999999764
No 323
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=46.11 E-value=1.2e+02 Score=27.10 Aligned_cols=88 Identities=9% Similarity=0.044 Sum_probs=45.5
Q ss_pred CHHHHHHHHHhC--CCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEE
Q 016771 263 DVPEALEKWHSL--GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFV 340 (383)
Q Consensus 263 gv~e~L~~L~~~--G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~V 340 (383)
-+..++++|+++ ++++.|-|+++..... ..+.+. + .+...| .+--.|......++.+. |+-++++
T Consensus 36 a~~~Li~~l~~~~p~~~illT~~T~tg~~~-~~~~~~--~--~v~~~~-----~P~D~~~~~~rfl~~~~---P~~~i~~ 102 (186)
T PF04413_consen 36 AARPLIKRLRKQRPDLRILLTTTTPTGREM-ARKLLP--D--RVDVQY-----LPLDFPWAVRRFLDHWR---PDLLIWV 102 (186)
T ss_dssp HHHHHHHHHTT---TS-EEEEES-CCHHHH-HHGG-G--G--G-SEEE--------SSHHHHHHHHHHH-----SEEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEEecCCchHHH-HHHhCC--C--CeEEEE-----eCccCHHHHHHHHHHhC---CCEEEEE
Confidence 466788888887 7888877775433221 122210 0 011111 12335788888888865 8899999
Q ss_pred ecCH--HhHHHHHHcCCcEEEEeCC
Q 016771 341 TDVY--QEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 341 GDs~--~Di~aA~~aG~~~i~v~~~ 363 (383)
+-.. +=+..|++.|++.++++--
T Consensus 103 EtElWPnll~~a~~~~ip~~LvNar 127 (186)
T PF04413_consen 103 ETELWPNLLREAKRRGIPVVLVNAR 127 (186)
T ss_dssp S----HHHHHH-----S-EEEEEE-
T ss_pred ccccCHHHHHHHhhcCCCEEEEeee
Confidence 9876 8899999999999999854
No 324
>PLN02997 flavonol synthase
Probab=45.73 E-value=20 Score=35.03 Aligned_cols=72 Identities=18% Similarity=0.154 Sum_probs=44.3
Q ss_pred eeeeecCCCCcc-ceEEEeeecCCC-CHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHH
Q 016771 15 EMIKGIKGHGYY-DELVVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAI 92 (383)
Q Consensus 15 e~~k~~~~~~~~-~~~~ipv~~n~~-~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~ 92 (383)
|++|-+.+.... ....||||+=.. +..+++++|.+|.+ +.-.+-|.|||+= .+--.+..++..-.|++-.
T Consensus 16 ~~~~~~~~~~~~~~~~~IPvIDls~~~~~~~~~~l~~Ac~---~~GFF~v~nHGI~-----~~li~~~~~~~~~FF~LP~ 87 (325)
T PLN02997 16 SLSKQLASSTLGGSAVDVPVVDLSVSDEDFLVREVVKASE---EWGVFQVVNHGIP-----TELMRQLQMVGKQFFELPE 87 (325)
T ss_pred chhhhhccccCCCCCCCCCeEECCCCCHHHHHHHHHHHHH---HCCEEEEECCCCC-----HHHHHHHHHHHHHHHcCCH
Confidence 556665554443 355799998754 34568888999887 4457788899983 2223333344555555444
Q ss_pred HH
Q 016771 93 KL 94 (383)
Q Consensus 93 ~~ 94 (383)
+.
T Consensus 88 ee 89 (325)
T PLN02997 88 AE 89 (325)
T ss_pred HH
Confidence 43
No 325
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=45.68 E-value=20 Score=33.80 Aligned_cols=96 Identities=10% Similarity=0.094 Sum_probs=57.9
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcc-cceeeee--ccC----CCCCCCHHHH-------H
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF--DTA----VGNKRETPSY-------V 323 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~-~~v~~~~--d~~----~~~KP~p~~~-------~ 323 (383)
+.+..|+.+++..|+++++++.|+|.+-...++..+.+.....-. .+++-+- +.. ...+|--..| +
T Consensus 137 i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~ 216 (298)
T KOG3128|consen 137 IALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQ 216 (298)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHH
Confidence 356789999999999999999999999888777776655311111 1222211 111 1122222222 2
Q ss_pred HHHHHcCC-CCCCcEEEEecCHHhHHHHHHc
Q 016771 324 EITNSLGV-DKPSEILFVTDVYQEATAAKAA 353 (383)
Q Consensus 324 ~~~~~l~v-~~p~e~l~VGDs~~Di~aA~~a 353 (383)
...+.+.. .....+++.|||..|+..|-.+
T Consensus 217 ~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 217 NESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred hhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 22222322 1257899999999999877543
No 326
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=43.99 E-value=46 Score=33.08 Aligned_cols=57 Identities=14% Similarity=0.149 Sum_probs=37.7
Q ss_pred EEeeecC------CCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHH
Q 016771 30 VVPIIEN------TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL 94 (383)
Q Consensus 30 ~ipv~~n------~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~ 94 (383)
.||||+= +++-.+++++|.++.+ +.-.+.|.||||= .+.-.+..++..-+|++-.+.
T Consensus 37 ~iPvIDls~~~~~~~~~~~~~~~l~~Ac~---~~GFf~v~nHGI~-----~~li~~~~~~~~~FF~LP~ee 99 (358)
T PLN02515 37 EIPVISLAGIDEVGGRRGEICRKIVEACE---DWGIFQVVDHGVD-----ANLVADMTRLARDFFALPAEE 99 (358)
T ss_pred CCCEEEChhccCCchHHHHHHHHHHHHHH---HCcEEEEEcCCCC-----HHHHHHHHHHHHHHhcCCHHH
Confidence 4999984 3334668888999998 4557789999983 344444455555566655544
No 327
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=43.94 E-value=52 Score=32.52 Aligned_cols=55 Identities=16% Similarity=0.270 Sum_probs=36.9
Q ss_pred EEeeecC----CCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHH
Q 016771 30 VVPIIEN----TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAI 92 (383)
Q Consensus 30 ~ipv~~n----~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~ 92 (383)
.||||+= +.+-.++++.|.++.+ ..-.+.|-||||=. +...+..++.+-.|++-.
T Consensus 41 ~iPvIDls~~~~~~~~~~~~~l~~A~~---~~GFf~v~nHGI~~-----~l~~~~~~~~~~FF~LP~ 99 (348)
T PLN02912 41 SIPLIDLRDLHGPNRADIINQFAHACS---SYGFFQIKNHGVPE-----ETIKKMMNVAREFFHQSE 99 (348)
T ss_pred CCCeEECcccCCcCHHHHHHHHHHHHH---HCCEEEEEeCCCCH-----HHHHHHHHHHHHHhcCCH
Confidence 5999984 3456678899999998 44577889999843 444444455555555333
No 328
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=43.90 E-value=1.7e+02 Score=28.38 Aligned_cols=28 Identities=11% Similarity=0.135 Sum_probs=24.9
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcH
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSR 286 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~ 286 (383)
-+.|++.++++.++++|..+.|.||+.-
T Consensus 84 LL~pdl~eiv~~~~~~g~~v~l~TNG~l 111 (318)
T TIGR03470 84 LLHPEIDEIVRGLVARKKFVYLCTNALL 111 (318)
T ss_pred cccccHHHHHHHHHHcCCeEEEecCcee
Confidence 3568999999999999999999999963
No 329
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=43.35 E-value=30 Score=37.80 Aligned_cols=36 Identities=22% Similarity=0.239 Sum_probs=24.6
Q ss_pred cCCCHHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHhh
Q 016771 260 VFDDVPEALEKWHS-LGTKVYIYSSGSRLAQRLIFGN 295 (383)
Q Consensus 260 ~~pgv~e~L~~L~~-~G~~l~IvTn~~~~~~~~~l~~ 295 (383)
+-+.+.+.|++|.+ .|..++|+|+.+...++..+..
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~ 551 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGD 551 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCC
Confidence 44667777777777 3777777777777666666553
No 330
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=43.14 E-value=15 Score=31.94 Aligned_cols=18 Identities=22% Similarity=0.178 Sum_probs=15.0
Q ss_pred CeEEEecccCCCcccccc
Q 016771 141 PRCIVLDIEGTTTPISFV 158 (383)
Q Consensus 141 ikaVlFDlDGTL~d~~~v 158 (383)
-..+++|||.||+.+.+.
T Consensus 6 kl~LVLDLDeTLihs~~~ 23 (156)
T TIGR02250 6 KLHLVLDLDQTLIHTTKD 23 (156)
T ss_pred ceEEEEeCCCCccccccc
Confidence 468999999999998643
No 331
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=43.09 E-value=1.3e+02 Score=26.40 Aligned_cols=27 Identities=30% Similarity=0.458 Sum_probs=24.0
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcH
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSR 286 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~ 286 (383)
+.|++.++++.+++.|+.+.|.||+..
T Consensus 75 l~~~l~~li~~~~~~g~~v~i~TNg~~ 101 (191)
T TIGR02495 75 LQAGLPDFLRKVRELGFEVKLDTNGSN 101 (191)
T ss_pred CcHhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 457789999999999999999999974
No 332
>PTZ00273 oxidase reductase; Provisional
Probab=42.33 E-value=43 Score=32.56 Aligned_cols=57 Identities=12% Similarity=0.139 Sum_probs=34.6
Q ss_pred EEeeecCC-------CCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHH
Q 016771 30 VVPIIENT-------AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL 94 (383)
Q Consensus 30 ~ipv~~n~-------~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~ 94 (383)
.||||+=. ....+++++|.++.+ ..-.+.|.|||+= .+...+..++.+-.|++-.+.
T Consensus 5 ~iPvIDl~~~~~~~~~~~~~~~~~l~~A~~---~~Gff~v~nhgi~-----~~l~~~~~~~~~~fF~lP~e~ 68 (320)
T PTZ00273 5 SLPVIDVSPLFGGESAEKMRVAKQIDEACR---TWGFFYIVGHPIP-----QERIEKVLKMAKTFFSLPMEE 68 (320)
T ss_pred CCCEEecHHhcCCChHHHHHHHHHHHHHHH---hCCEEEEECCCCC-----HHHHHHHHHHHHHHHcCCHHH
Confidence 37887732 223568888888887 4557788899983 233344444445556544433
No 333
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=42.23 E-value=23 Score=30.83 Aligned_cols=16 Identities=25% Similarity=0.225 Sum_probs=14.2
Q ss_pred CCeEEEecccCCCccc
Q 016771 140 FPRCIVLDIEGTTTPI 155 (383)
Q Consensus 140 ~ikaVlFDlDGTL~d~ 155 (383)
.||||+||.|+|++-.
T Consensus 42 ~ikavVlDKDNcit~P 57 (190)
T KOG2961|consen 42 GIKAVVLDKDNCITAP 57 (190)
T ss_pred CceEEEEcCCCeeeCC
Confidence 6899999999999853
No 334
>PHA00026 cp coat protein
Probab=42.08 E-value=17 Score=29.01 Aligned_cols=40 Identities=23% Similarity=0.444 Sum_probs=28.7
Q ss_pred eEEEeeecCCCCHHHHHHHHHHHHHh-CCCCeEEEEccccce
Q 016771 28 ELVVPIIENTAYENELTDSLAKAIDA-YPKATAVLVRNHGIY 68 (383)
Q Consensus 28 ~~~ipv~~n~~~~~~l~~~~~~~~~~-~p~~~a~Li~~HG~~ 68 (383)
.++||||.-..|..-+...++-.+.. +| .+-.+-+|.|+|
T Consensus 89 ~ltipifa~nddc~li~kal~glfk~gnp-ia~aiaansg~y 129 (129)
T PHA00026 89 DLTIPIFAANDDCELISKALAGLFKDGNP-IAEAIAANSGFY 129 (129)
T ss_pred eeeeeEEecCCcHHHHHHHHHHHhccCCc-hHHHHhhccCCC
Confidence 68899999999999888888877763 23 223344566655
No 335
>PLN02485 oxidoreductase
Probab=41.96 E-value=51 Score=32.19 Aligned_cols=47 Identities=28% Similarity=0.271 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHH
Q 016771 40 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL 94 (383)
Q Consensus 40 ~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~ 94 (383)
-.+++++|.++.+ ..-.+.|.|||| . .+.-.+..++..-.|++-.+.
T Consensus 31 ~~~~~~~l~~Ac~---~~GFf~l~nHGi---~--~~l~~~~~~~~~~FF~lP~e~ 77 (329)
T PLN02485 31 VAEVVRQLDKACR---DAGFFYVKGHGI---S--DSLIKKVREVTHEFFELPYEE 77 (329)
T ss_pred HHHHHHHHHHHHH---HCCEEEEECCCC---C--HHHHHHHHHHHHHHHcCCHHH
Confidence 3468888999987 445678889997 2 222333344444456544433
No 336
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=41.61 E-value=16 Score=32.63 Aligned_cols=15 Identities=27% Similarity=0.375 Sum_probs=13.2
Q ss_pred CCeEEEecccCCCcc
Q 016771 140 FPRCIVLDIEGTTTP 154 (383)
Q Consensus 140 ~ikaVlFDlDGTL~d 154 (383)
..++|+||-||||..
T Consensus 4 ~~k~lflDRDGtin~ 18 (181)
T COG0241 4 DQKALFLDRDGTINI 18 (181)
T ss_pred CCcEEEEcCCCceec
Confidence 368999999999984
No 337
>PF04995 CcmD: Heme exporter protein D (CcmD); InterPro: IPR007078 The CcmD protein is part of a C-type cytochrome biogenesis operon []. The exact function of this protein is uncertain. It has been proposed that CcmC, CcmD and CcmE interact directly with each other, establishing a cytoplasm to periplasm haem delivery pathway for cytochrome c maturation []. This protein is found fused to CcmE in P52224 from SWISSPROT. These proteins contain a predicted transmembrane helix.; GO: 0006810 transport, 0016021 integral to membrane
Probab=40.67 E-value=5.2 Score=27.25 Aligned_cols=8 Identities=50% Similarity=1.315 Sum_probs=4.1
Q ss_pred cccceeec
Q 016771 64 NHGIYVWG 71 (383)
Q Consensus 64 ~HG~~~wG 71 (383)
+||.|||+
T Consensus 2 gy~~yVW~ 9 (46)
T PF04995_consen 2 GYGFYVWS 9 (46)
T ss_pred CcHHHHHH
Confidence 45555554
No 338
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=39.69 E-value=27 Score=33.20 Aligned_cols=16 Identities=31% Similarity=0.856 Sum_probs=13.9
Q ss_pred CeEEEecccCCCcccc
Q 016771 141 PRCIVLDIEGTTTPIS 156 (383)
Q Consensus 141 ikaVlFDlDGTL~d~~ 156 (383)
.++++||+||||.+..
T Consensus 158 ~~~~~~D~dgtl~~~~ 173 (300)
T PHA02530 158 PKAVIFDIDGTLAKMG 173 (300)
T ss_pred CCEEEEECCCcCcCCC
Confidence 4799999999999864
No 339
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=39.29 E-value=57 Score=35.32 Aligned_cols=52 Identities=17% Similarity=0.264 Sum_probs=43.2
Q ss_pred CCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 016771 55 PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNH 106 (383)
Q Consensus 55 p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~~~~~~~ 106 (383)
|....+|+.+=|++.||+|..+|+--.|.++--++....+..+|.=..++..
T Consensus 337 ~~p~~~~~~~~g~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (676)
T TIGR02632 337 PNPRVLLIPGVGMISFGKDKETARVAREFYVNAINVMRGAEAVSEYVSLPEQ 388 (676)
T ss_pred CCCeEEEEcCcceEEecCCHHHhhhhHHHHHHHHHHHhhhhcccceecCchh
Confidence 4457899999999999999999999999999988888888777755545443
No 340
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=39.28 E-value=4.4e+02 Score=28.06 Aligned_cols=99 Identities=14% Similarity=0.162 Sum_probs=62.1
Q ss_pred ccCCCHHHHHHHHHh---CCCeEEEEcCCcHH------HHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHc
Q 016771 259 EVFDDVPEALEKWHS---LGTKVYIYSSGSRL------AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL 329 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~---~G~~l~IvTn~~~~------~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l 329 (383)
..++++.+..+++.+ ++-++.|++..+.+ .....|++++......++...+. .+.-.++..+..+.+.
T Consensus 50 ~~l~~m~~a~~ri~~ai~~~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~--eGYGl~~~~i~~~~~~- 126 (575)
T PRK11070 50 QQLSGIEKAVELLYNALREGTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFE--DGYGLSPEVVDQAHAR- 126 (575)
T ss_pred HHhhCHHHHHHHHHHHHHCCCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCc--CCCCCCHHHHHHHHhc-
Confidence 356777777777743 57799999987533 34455666643222224443222 2345667788877653
Q ss_pred CCCCCCcEEEEecCHH---hHHHHHHcCCcEEEEeCC
Q 016771 330 GVDKPSEILFVTDVYQ---EATAAKAAGLEVVISIRP 363 (383)
Q Consensus 330 ~v~~p~e~l~VGDs~~---Di~aA~~aG~~~i~v~~~ 363 (383)
+ .+=++.|+-+.. .+..|++.|+.+|.....
T Consensus 127 ~---~~LiItvD~Gi~~~e~i~~a~~~gidvIVtDHH 160 (575)
T PRK11070 127 G---AQLIVTVDNGISSHAGVAHAHALGIPVLVTDHH 160 (575)
T ss_pred C---CCEEEEEcCCcCCHHHHHHHHHCCCCEEEECCC
Confidence 3 446777776654 566669999999877654
No 341
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=39.08 E-value=67 Score=31.34 Aligned_cols=57 Identities=14% Similarity=0.155 Sum_probs=38.7
Q ss_pred EeeecCC----CCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHH
Q 016771 31 VPIIENT----AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLH 95 (383)
Q Consensus 31 ipv~~n~----~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~ 95 (383)
||||+=. .+-.+.++.|.++.+ +.-.+-|-|||| +.+.-.+..++..-+|++-.+.+
T Consensus 7 iPvIDls~~~~~~~~~~~~~l~~A~~---~~GFF~v~nHGI-----~~~l~~~~~~~~~~fF~LP~e~K 67 (321)
T PLN02299 7 FPVIDMEKLNGEERAATMELIKDACE---NWGFFELVNHGI-----SHELMDEVEKMTKEHYKKCMEQR 67 (321)
T ss_pred CCEEECcCCCcccHHHHHHHHHHHHH---hcCEEEEECCCC-----CHHHHHHHHHHHHHHhCCCHHHH
Confidence 7888743 344567888888887 445778899998 55555566666666676555443
No 342
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=38.59 E-value=41 Score=28.22 Aligned_cols=15 Identities=13% Similarity=0.191 Sum_probs=12.6
Q ss_pred CCCeEEEecccCCCc
Q 016771 139 LFPRCIVLDIEGTTT 153 (383)
Q Consensus 139 ~~ikaVlFDlDGTL~ 153 (383)
+....|+||+.+||-
T Consensus 43 ~~P~iV~FDmK~Tld 57 (128)
T PRK13717 43 NAPVTAAFNMKQTVD 57 (128)
T ss_pred CCCeEEEEehHHHHH
Confidence 456899999999983
No 343
>PLN02591 tryptophan synthase
Probab=38.35 E-value=3.3e+02 Score=25.62 Aligned_cols=101 Identities=10% Similarity=-0.014 Sum_probs=57.4
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEc-CCc-HHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCc
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYS-SGS-RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvT-n~~-~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e 336 (383)
-++++..++.+.+++.|+....+- -++ .+..+.+.+.. .++-.+++. ....+.....|.-+...+++..-. .+-
T Consensus 115 LP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~--~gFIY~Vs~-~GvTG~~~~~~~~~~~~i~~vk~~-~~~ 190 (250)
T PLN02591 115 LPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEAS--EGFVYLVSS-TGVTGARASVSGRVESLLQELKEV-TDK 190 (250)
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhC--CCcEEEeeC-CCCcCCCcCCchhHHHHHHHHHhc-CCC
Confidence 355678899999999998754444 333 44455555554 244333332 111221212233344433333322 345
Q ss_pred EEEEecC---HHhHHHHHHcCCcEEEEeCC
Q 016771 337 ILFVTDV---YQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 337 ~l~VGDs---~~Di~aA~~aG~~~i~v~~~ 363 (383)
-++||=. ..|+..+.+.|...+.|...
T Consensus 191 Pv~vGFGI~~~e~v~~~~~~GADGvIVGSa 220 (250)
T PLN02591 191 PVAVGFGISKPEHAKQIAGWGADGVIVGSA 220 (250)
T ss_pred ceEEeCCCCCHHHHHHHHhcCCCEEEECHH
Confidence 5667744 56999999999999888653
No 344
>PLN02580 trehalose-phosphatase
Probab=36.82 E-value=60 Score=32.63 Aligned_cols=59 Identities=17% Similarity=0.294 Sum_probs=38.7
Q ss_pred CHHHHHHHHHHcCCCCCCc-E--EEEecCHHhHHHHHHc-----CCcEEEEeCCCCCCCCCCCCCeeeCCccC
Q 016771 318 ETPSYVEITNSLGVDKPSE-I--LFVTDVYQEATAAKAA-----GLEVVISIRPGNGPLPENHGFKTINSFAE 382 (383)
Q Consensus 318 ~p~~~~~~~~~l~v~~p~e-~--l~VGDs~~Di~aA~~a-----G~~~i~v~~~~~~~~~~~~~d~vI~sl~e 382 (383)
+-.....+++.++++ ..+ + ++|||+.+|..+-+.+ |+ .|.|..+.. ...+.+.+++..|
T Consensus 302 KG~Av~~Ll~~~g~~-~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~~~----~t~A~y~L~dp~e 368 (384)
T PLN02580 302 KGKAVEFLLESLGLS-NCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSVPK----ESNAFYSLRDPSE 368 (384)
T ss_pred HHHHHHHHHHhcCCC-cccceeEEEECCCchHHHHHHhhhccCCce-EEEEecCCC----CccceEEcCCHHH
Confidence 456778889999987 653 3 8999999999888753 43 455554321 1223566766554
No 345
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=36.68 E-value=1.5e+02 Score=31.30 Aligned_cols=86 Identities=14% Similarity=0.132 Sum_probs=50.2
Q ss_pred CHHHHHHHHHhCCCeEEEEcCCcHHHH-HHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 016771 263 DVPEALEKWHSLGTKVYIYSSGSRLAQ-RLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 341 (383)
Q Consensus 263 gv~e~L~~L~~~G~~l~IvTn~~~~~~-~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VG 341 (383)
++...|...++.+-+++|++-.+.... +.+-+.+++ ++. .++- . ..-+...-..-+++.|++ ++||
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~-~i~-~~~~--~----~~~e~~~~v~~lk~~G~~-----~vvG 161 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNL-RIE-QRSY--V----TEEDARGQINELKANGIE-----AVVG 161 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCC-ceE-EEEe--c----CHHHHHHHHHHHHHCCCC-----EEEc
Confidence 466666666777779999998764433 333333311 111 1111 1 111223333444555654 6789
Q ss_pred cCHHhHHHHHHcCCcEEEEeC
Q 016771 342 DVYQEATAAKAAGLEVVISIR 362 (383)
Q Consensus 342 Ds~~Di~aA~~aG~~~i~v~~ 362 (383)
|... +..|.++|+..+++..
T Consensus 162 ~~~~-~~~A~~~g~~g~~~~s 181 (538)
T PRK15424 162 AGLI-TDLAEEAGMTGIFIYS 181 (538)
T ss_pred CchH-HHHHHHhCCceEEecC
Confidence 9776 7899999999998874
No 346
>PLN02704 flavonol synthase
Probab=36.57 E-value=80 Score=30.96 Aligned_cols=58 Identities=22% Similarity=0.177 Sum_probs=37.1
Q ss_pred EEEeeecCCC-CHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHH
Q 016771 29 LVVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL 94 (383)
Q Consensus 29 ~~ipv~~n~~-~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~ 94 (383)
..||||+-.. +..++++.|.++.+ +.-.+.|.|||+= .+...+..++.+-+|++-.+.
T Consensus 41 ~~iPvIDls~~~~~~~~~~l~~Ac~---~~GFf~l~nHGI~-----~~l~~~~~~~~~~FF~LP~e~ 99 (335)
T PLN02704 41 PQVPTIDLSDPDEEKLTRLIAEASK---EWGMFQIVNHGIP-----SEVISKLQKVGKEFFELPQEE 99 (335)
T ss_pred CCCCeEECCCccHHHHHHHHHHHHH---HcCEEEEEcCCCC-----HHHHHHHHHHHHHHHcCCHHH
Confidence 3599999764 45678888888887 3456679999994 233333334445555544433
No 347
>PLN02382 probable sucrose-phosphatase
Probab=36.08 E-value=26 Score=35.54 Aligned_cols=15 Identities=27% Similarity=0.204 Sum_probs=12.2
Q ss_pred CeEEEecccCCCccc
Q 016771 141 PRCIVLDIEGTTTPI 155 (383)
Q Consensus 141 ikaVlFDlDGTL~d~ 155 (383)
--.|+-||||||++.
T Consensus 9 ~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 9 RLMIVSDLDHTMVDH 23 (413)
T ss_pred CEEEEEcCCCcCcCC
Confidence 356777999999986
No 348
>PRK08005 epimerase; Validated
Probab=35.66 E-value=3.5e+02 Score=24.74 Aligned_cols=97 Identities=15% Similarity=0.140 Sum_probs=64.5
Q ss_pred CCCHHHHHHHHHhCCCeEEEEcCCc--HHHHHHHHhhcCCCCcccceeeeecc-CCCCCCCHHHHHHHHHHcCCCCCCcE
Q 016771 261 FDDVPEALEKWHSLGTKVYIYSSGS--RLAQRLIFGNSNYGDLRKYLSGFFDT-AVGNKRETPSYVEITNSLGVDKPSEI 337 (383)
Q Consensus 261 ~pgv~e~L~~L~~~G~~l~IvTn~~--~~~~~~~l~~~~~~~l~~~v~~~~d~-~~~~KP~p~~~~~~~~~l~v~~p~e~ 337 (383)
-+...++|+.+|+.|.+.+|+=|.. .+..+..+... ++--+.+- +. ..+.|=.|..+.++.+--... ++.-
T Consensus 92 ~~~~~~~l~~Ik~~G~k~GlAlnP~Tp~~~i~~~l~~v---D~VlvMsV--~PGf~GQ~f~~~~~~KI~~l~~~~-~~~~ 165 (210)
T PRK08005 92 VQNPSEILADIRAIGAKAGLALNPATPLLPYRYLALQL---DALMIMTS--EPDGRGQQFIAAMCEKVSQSREHF-PAAE 165 (210)
T ss_pred ccCHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHhc---CEEEEEEe--cCCCccceecHHHHHHHHHHHHhc-ccCC
Confidence 3567899999999999999998864 44555566655 33322332 22 234577788888887644443 3323
Q ss_pred EEEecCH--HhHHHHHHcCCcEEEEeCC
Q 016771 338 LFVTDVY--QEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 338 l~VGDs~--~Di~aA~~aG~~~i~v~~~ 363 (383)
+-|+=+. .-+....++|...+.+.+.
T Consensus 166 I~VDGGI~~~~i~~l~~aGad~~V~Gsa 193 (210)
T PRK08005 166 CWADGGITLRAARLLAAAGAQHLVIGRA 193 (210)
T ss_pred EEEECCCCHHHHHHHHHCCCCEEEEChH
Confidence 6666555 5677889999998777654
No 349
>TIGR03141 cytochro_ccmD heme exporter protein CcmD. The model for this protein family describes a small, hydrophobic, and only moderately well-conserved protein, tricky to identify accurately for all of these reasons. However, members are found as part of large operons involved in heme export across the inner membrane for assembly of c-type cytochromes in a large number of bacteria. The gray zone between the trusted cutoff (13.0) and noise cutoff (4.75) includes both low-scoring examples and false-positive matches to hydrophobic domains of longer proteins.
Probab=34.41 E-value=7.6 Score=26.35 Aligned_cols=9 Identities=33% Similarity=0.755 Sum_probs=5.3
Q ss_pred cccceeecC
Q 016771 64 NHGIYVWGD 72 (383)
Q Consensus 64 ~HG~~~wG~ 72 (383)
+||.|||+.
T Consensus 3 gy~~yVW~s 11 (45)
T TIGR03141 3 GYAFYVWLA 11 (45)
T ss_pred CccHHHHHH
Confidence 566666654
No 350
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=33.85 E-value=98 Score=30.36 Aligned_cols=56 Identities=20% Similarity=0.262 Sum_probs=37.5
Q ss_pred EEeeecCCC-CHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHH
Q 016771 30 VVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIK 93 (383)
Q Consensus 30 ~ipv~~n~~-~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~ 93 (383)
.||||+=.. +-.+++++|.+|.+ ..-.+.|-|||+ +.+...+..++..-.|++-..
T Consensus 37 ~iPvIDls~~~~~~~~~~l~~Ac~---~~GFf~v~nHGI-----~~~l~~~~~~~~~~fF~LP~e 93 (337)
T PLN02639 37 NVPVIDLGSPDRAQVVQQIGDACR---RYGFFQVINHGV-----SAELVEKMLAVAHEFFRLPVE 93 (337)
T ss_pred CCCeEECCCccHHHHHHHHHHHHH---hCCEEEEEcCCC-----CHHHHHHHHHHHHHHhcCCHH
Confidence 499998763 34568888999997 345667889998 344445555555555665443
No 351
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=33.73 E-value=3.6e+02 Score=24.70 Aligned_cols=100 Identities=11% Similarity=0.051 Sum_probs=60.7
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCc--HHHHHHHHhhcCCCCcccceeeeecc-CCCCCCCHHHHHHHHHHcCCCC--
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGS--RLAQRLIFGNSNYGDLRKYLSGFFDT-AVGNKRETPSYVEITNSLGVDK-- 333 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~--~~~~~~~l~~~~~~~l~~~v~~~~d~-~~~~KP~p~~~~~~~~~l~v~~-- 333 (383)
+..+...++|+.+|+.|.+.+++-|.. .+....+++.. ++.-+.+- +. ..+.|--|..+.++.+--....
T Consensus 90 Ea~~~~~~~l~~ik~~g~k~GlalnP~Tp~~~i~~~l~~~---D~vlvMtV--~PGfgGq~fi~~~lekI~~l~~~~~~~ 164 (220)
T PRK08883 90 EASEHVDRTLQLIKEHGCQAGVVLNPATPLHHLEYIMDKV---DLILLMSV--NPGFGGQSFIPHTLDKLRAVRKMIDES 164 (220)
T ss_pred cCcccHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhC---CeEEEEEe--cCCCCCceecHhHHHHHHHHHHHHHhc
Confidence 344678899999999999999998864 45555666655 43333332 22 2234555555555433222210
Q ss_pred -C-CcEEEEec-CHHhHHHHHHcCCcEEEEeCC
Q 016771 334 -P-SEILFVTD-VYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 334 -p-~e~l~VGD-s~~Di~aA~~aG~~~i~v~~~ 363 (383)
. -.+...|- +...+....++|...+.+.+.
T Consensus 165 ~~~~~I~vdGGI~~eni~~l~~aGAd~vVvGSa 197 (220)
T PRK08883 165 GRDIRLEIDGGVKVDNIREIAEAGADMFVAGSA 197 (220)
T ss_pred CCCeeEEEECCCCHHHHHHHHHcCCCEEEEeHH
Confidence 1 12334442 237888999999999988765
No 352
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=33.26 E-value=4.1e+02 Score=24.92 Aligned_cols=97 Identities=14% Similarity=0.106 Sum_probs=68.0
Q ss_pred ccCCCHHHHHHH---HHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 259 EVFDDVPEALEK---WHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 259 ~~~pgv~e~L~~---L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
.++|+..++|+. |-+.|+.+.-+||.+....+++.+ .|+.-+-+.-+.+ . ....--+|..++.++++..++
T Consensus 111 tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~arrLee-~GcaavMPl~aPI-G-Sg~G~~n~~~l~iiie~a~VP--- 184 (262)
T COG2022 111 TLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLARRLEE-AGCAAVMPLGAPI-G-SGLGLQNPYNLEIIIEEADVP--- 184 (262)
T ss_pred ccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHHHHHHh-cCceEeccccccc-c-CCcCcCCHHHHHHHHHhCCCC---
Confidence 689999988876 557899999999998887776654 4332222221110 0 123445788889999998886
Q ss_pred cEEEEec---CHHhHHHHHHcCCcEEEEeCC
Q 016771 336 EILFVTD---VYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 336 e~l~VGD---s~~Di~aA~~aG~~~i~v~~~ 363 (383)
+.|+- ++.|...|.+.|+..|+++.-
T Consensus 185 --viVDAGiG~pSdAa~aMElG~DaVL~NTA 213 (262)
T COG2022 185 --VIVDAGIGTPSDAAQAMELGADAVLLNTA 213 (262)
T ss_pred --EEEeCCCCChhHHHHHHhcccceeehhhH
Confidence 34442 458999999999999998754
No 353
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=32.55 E-value=38 Score=31.45 Aligned_cols=29 Identities=14% Similarity=0.158 Sum_probs=25.1
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHH
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLA 288 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~ 288 (383)
+.++..++++.|++.|+++.|-||+....
T Consensus 85 l~~~l~~li~~l~~~g~~v~leTNGtl~~ 113 (238)
T TIGR03365 85 LQKPLGELIDLGKAKGYRFALETQGSVWQ 113 (238)
T ss_pred hhHhHHHHHHHHHHCCCCEEEECCCCCcH
Confidence 34789999999999999999999997543
No 354
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=32.33 E-value=50 Score=32.01 Aligned_cols=55 Identities=20% Similarity=0.258 Sum_probs=34.1
Q ss_pred EeeecCCC----CHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHH
Q 016771 31 VPIIENTA----YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIK 93 (383)
Q Consensus 31 ipv~~n~~----~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~ 93 (383)
||||+=.. +..+++++|.+|.+ ..-.+-|.|||| +.+--.+..++..-.|++-.+
T Consensus 3 iPvIDls~~~~~~~~~~~~~l~~Ac~---~~GFf~v~nHGI-----~~~l~~~~~~~~~~FF~LP~e 61 (303)
T PLN02403 3 IPVIDFDQLDGEKRSKTMSLLHQACE---KWGFFQVENHGI-----DKKLMEKVKQLVNSHYEENLK 61 (303)
T ss_pred CCeEeCccCCcccHHHHHHHHHHHHH---hCceEEEECCCC-----CHHHHHHHHHHHHHHhcCCHH
Confidence 78887432 35668888999887 445778999998 333333333444444444443
No 355
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=31.95 E-value=49 Score=33.97 Aligned_cols=38 Identities=13% Similarity=-0.090 Sum_probs=22.0
Q ss_pred CCCCCeEEEecccCCCccccccchhhhhHHHHHHHhHHhh
Q 016771 137 SGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSV 176 (383)
Q Consensus 137 ~~~~ikaVlFDlDGTL~d~~~v~~~l~~~~~~~~~~~l~~ 176 (383)
....|++|-||+|-||+-... ..+...+.+.+.+++..
T Consensus 8 ~l~~i~~iGFDmDyTLa~Y~~--~~~~~L~y~~~~~~LV~ 45 (448)
T PF05761_consen 8 NLKDIDVIGFDMDYTLARYKS--PELEELIYELARERLVE 45 (448)
T ss_dssp ECCC--EEEE-TBTTTBEE-C--CHHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEECcccchhhcCH--HHHHHHHHHHHHHHHHh
Confidence 346799999999999997642 12444555555555544
No 356
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=31.59 E-value=1.8e+02 Score=27.62 Aligned_cols=88 Identities=14% Similarity=0.074 Sum_probs=57.3
Q ss_pred ccCCCHHHHHHHHHhC------CCeEEEEcCCcHHHHHHHHhhcCCCCcc-c--ceeeeeccCCCCCCCHHHHHHHHHHc
Q 016771 259 EVFDDVPEALEKWHSL------GTKVYIYSSGSRLAQRLIFGNSNYGDLR-K--YLSGFFDTAVGNKRETPSYVEITNSL 329 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~------G~~l~IvTn~~~~~~~~~l~~~~~~~l~-~--~v~~~~d~~~~~KP~p~~~~~~~~~l 329 (383)
-||......|.+|+++ -++++|+|..+.....+.++.+.-.++. + +|-+ +..| ..+++.+
T Consensus 164 GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFLg-----G~~K------~~vL~~~ 232 (264)
T PF06189_consen 164 GPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFLG-----GLPK------GPVLKAF 232 (264)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHhC-----CCch------hHHHHhh
Confidence 3445555555555543 4799999999877777777776433442 1 2222 1233 2344444
Q ss_pred CCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCC
Q 016771 330 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 330 ~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~ 363 (383)
+- =+|++|...-+..|. .++.++.|.++
T Consensus 233 ~p-----hIFFDDQ~~H~~~a~-~~vps~hVP~g 260 (264)
T PF06189_consen 233 RP-----HIFFDDQDGHLESAS-KVVPSGHVPYG 260 (264)
T ss_pred CC-----CEeecCchhhhhHhh-cCCCEEeccCC
Confidence 43 279999999999998 88999998876
No 357
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=31.55 E-value=67 Score=29.65 Aligned_cols=36 Identities=8% Similarity=-0.024 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcC
Q 016771 262 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 297 (383)
Q Consensus 262 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~ 297 (383)
|.+.+++++++++|++++++|+.+...++.+++.++
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~ 59 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKP 59 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCC
Confidence 577789999999999999999999999998888774
No 358
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=31.45 E-value=79 Score=28.94 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=28.4
Q ss_pred cCCC-HHHHHHHHHhCCCeEEEEcCCc--HHHHHHHHhhc
Q 016771 260 VFDD-VPEALEKWHSLGTKVYIYSSGS--RLAQRLIFGNS 296 (383)
Q Consensus 260 ~~pg-v~e~L~~L~~~G~~l~IvTn~~--~~~~~~~l~~~ 296 (383)
+.++ +.++++.++++|+.++|-||+. .+..+.++...
T Consensus 51 lq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~~~ 90 (213)
T PRK10076 51 MQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLC 90 (213)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHhc
Confidence 4455 6899999999999999999994 45555555544
No 359
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=29.65 E-value=1.6e+02 Score=29.01 Aligned_cols=86 Identities=12% Similarity=0.125 Sum_probs=54.2
Q ss_pred ccCCCHHHHHHHHHhC----CCeEEEEcCCcHHH----HHHHHhhcCCCCcccceeeeeccCCC-CCCCHHHHHHHHHHc
Q 016771 259 EVFDDVPEALEKWHSL----GTKVYIYSSGSRLA----QRLIFGNSNYGDLRKYLSGFFDTAVG-NKRETPSYVEITNSL 329 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~----G~~l~IvTn~~~~~----~~~~l~~~~~~~l~~~v~~~~d~~~~-~KP~p~~~~~~~~~l 329 (383)
.+.|++.++|+.|.++ .++...+||+..-. ...+-+.+++ -++. +.... ..| |+... ++
T Consensus 51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv-----~Vs~--dqviqSHsP----~r~l~-~~ 118 (389)
T KOG1618|consen 51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGV-----EVSA--DQVIQSHSP----FRLLV-EY 118 (389)
T ss_pred CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCC-----ccCH--HHHHhhcCh----HHHHh-hh
Confidence 6899999999999998 89999999995322 2233333321 1121 21111 222 44444 33
Q ss_pred CCCCCCcEEEEecCHHhHHHHHHcCCcEEEE
Q 016771 330 GVDKPSEILFVTDVYQEATAAKAAGLEVVIS 360 (383)
Q Consensus 330 ~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v 360 (383)
. -++++.+|+.. -.+-|...|++.|.-
T Consensus 119 ~---~k~vLv~G~~~-vr~vAegyGFk~Vvt 145 (389)
T KOG1618|consen 119 H---YKRVLVVGQGS-VREVAEGYGFKNVVT 145 (389)
T ss_pred h---hceEEEecCCc-HHHHhhccCccceee
Confidence 3 56999999654 356688899987653
No 360
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=29.39 E-value=52 Score=30.98 Aligned_cols=31 Identities=13% Similarity=0.274 Sum_probs=26.6
Q ss_pred cccccCCCHHHHHHHHHhCCCeEEEEcCCcH
Q 016771 256 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSR 286 (383)
Q Consensus 256 ~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~ 286 (383)
....-||+.+++++.|+++|+++.+..+...
T Consensus 60 ~d~~~Fpdp~~~i~~l~~~g~~~~~~~~P~v 90 (265)
T cd06589 60 WDAGKFPNPKSMIDELHDNGVKLVLWIDPYI 90 (265)
T ss_pred cChhhCCCHHHHHHHHHHCCCEEEEEeChhH
Confidence 3346799999999999999999999988753
No 361
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=29.29 E-value=4.8e+02 Score=25.79 Aligned_cols=62 Identities=26% Similarity=0.373 Sum_probs=36.6
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHc
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL 329 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~---~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l 329 (383)
.-||.-.-+|+.+ .|+.-.|.+++... ..+.++++++ +..-++-| |+ ..-||++|-.+++++
T Consensus 237 ~~~P~GPl~L~~~--g~~~~~i~~sga~rK~~~l~nil~~~p--~~kfvLVG--Ds---GE~DpeIYae~v~~f 301 (373)
T COG4850 237 RNFPYGPLLLRRW--GGVLDNIIESGAARKGQSLRNILRRYP--DRKFVLVG--DS---GEHDPEIYAEMVRCF 301 (373)
T ss_pred CCCCCCchhHhhc--CCcccccccchhhhcccHHHHHHHhCC--CceEEEec--CC---CCcCHHHHHHHHHhC
Confidence 3466666677777 45655566655322 3334566553 22223444 43 567899999999885
No 362
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein. This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.
Probab=29.25 E-value=49 Score=32.34 Aligned_cols=117 Identities=15% Similarity=0.173 Sum_probs=65.3
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCCCcccc
Q 016771 34 IENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW-STPNHGPTRNF 112 (383)
Q Consensus 34 ~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~~~~~~~-~~~~~~~~~~~ 112 (383)
++=+++.++|.+.+.+.++..+. ...|+++--|+=-+.=....|-++|+.+..-++. +.+. .....|..-..
T Consensus 29 ~plW~~~~~L~~~l~~~~~~~~~-----~~~~avtMTgELaD~f~~r~~GV~~i~~~~~~~~--~~~~~i~~s~GG~~s~ 101 (318)
T TIGR03123 29 CPLWKGNDKLAETLKEISQDLSS-----ADNVAVTMTGELADCFEDKAEGVEFILAAVESAF--GSPVSVFASDGGFVSA 101 (318)
T ss_pred CcccCCchHHHHHHHHHHHhcCc-----cceEEEEeehhhhhhhcCHHHHHHHHHHHHHHhc--CCCeEEEecCCCCccH
Confidence 56677788888888888764431 1789999999866666677899999998776555 3232 22333321110
Q ss_pred ccccCCCCCccc-ccccccCCCCCCCCCCCeEEEecccCCCccccccch
Q 016771 113 KLGLGSNGNVNT-SAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSE 160 (383)
Q Consensus 113 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ikaVlFDlDGTL~d~~~v~~ 160 (383)
.--. .-|..+ +|...+.. ..-....-.+|+|||=||-+|...+.+
T Consensus 102 ~~a~--~~pv~~~~Sg~~a~A-~~la~~~~~~I~~DmGGTTtDi~~i~~ 147 (318)
T TIGR03123 102 EEAL--TNPLDVAAANWLATA-QLIAKRIPECLFVDMGSTTTDIIPIID 147 (318)
T ss_pred HHHH--HhHHHHHHhhHHHHH-HHHHhcCCCEEEEEcCccceeeEEecC
Confidence 0000 000000 00000000 000001446999999999999865543
No 363
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=29.03 E-value=93 Score=33.73 Aligned_cols=39 Identities=13% Similarity=0.050 Sum_probs=34.4
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCC
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 298 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~ 298 (383)
..+.+.+.|++|+++|++++++|+.+...+..+++.++.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 456789999999999999999999999998888888854
No 364
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=28.74 E-value=48 Score=32.91 Aligned_cols=16 Identities=19% Similarity=0.370 Sum_probs=13.9
Q ss_pred CCeEEEecccCCCccc
Q 016771 140 FPRCIVLDIEGTTTPI 155 (383)
Q Consensus 140 ~ikaVlFDlDGTL~d~ 155 (383)
+.|+++||-||||+..
T Consensus 1 ~~k~l~lDrDgtl~~~ 16 (354)
T PRK05446 1 MQKILFIDRDGTLIEE 16 (354)
T ss_pred CCcEEEEeCCCCccCC
Confidence 3589999999999985
No 365
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=28.41 E-value=1.3e+02 Score=29.82 Aligned_cols=74 Identities=12% Similarity=0.126 Sum_probs=43.5
Q ss_pred CHHHHHHHHHhCC--CeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEE
Q 016771 263 DVPEALEKWHSLG--TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFV 340 (383)
Q Consensus 263 gv~e~L~~L~~~G--~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~V 340 (383)
++..+-++|+++| +.++++|..+...++.-.+- .+-...++++++ |+.|++|
T Consensus 52 ~avkiydeL~~~GedveVA~VsG~~~~~v~ad~~I-----------------------~~qld~vl~~~~---~~~~i~V 105 (344)
T PF04123_consen 52 GAVKIYDELKAEGEDVEVAVVSGSPDVGVEADRKI-----------------------AEQLDEVLSKFD---PDSAIVV 105 (344)
T ss_pred HHHHHHHHHHhcCCCeEEEEEECCCCCchhhHHHH-----------------------HHHHHHHHHhCC---CCEEEEE
Confidence 3445666777766 67888887654322111110 012234555543 7799999
Q ss_pred ecCHHhHH--HHHHcCCcEEEEeC
Q 016771 341 TDVYQEAT--AAKAAGLEVVISIR 362 (383)
Q Consensus 341 GDs~~Di~--aA~~aG~~~i~v~~ 362 (383)
.|++.|-. ..-+.-.+..+|.|
T Consensus 106 sDGaeDE~vlPiIqSr~~V~sV~R 129 (344)
T PF04123_consen 106 SDGAEDERVLPIIQSRVPVDSVKR 129 (344)
T ss_pred ecChhhhhhhHhhhccCceEEEEE
Confidence 99997754 44566666666665
No 366
>PRK00043 thiE thiamine-phosphate pyrophosphorylase; Reviewed
Probab=27.90 E-value=4.2e+02 Score=23.34 Aligned_cols=88 Identities=15% Similarity=0.151 Sum_probs=51.5
Q ss_pred HHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccce--eeeeccCCCCCCC------HHHHHHHHHHcCCCCCCc
Q 016771 265 PEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFFDTAVGNKRE------TPSYVEITNSLGVDKPSE 336 (383)
Q Consensus 265 ~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v--~~~~d~~~~~KP~------p~~~~~~~~~l~v~~p~e 336 (383)
...++.++..+..+++.+++..+..+... . +. +++ +.+|... .||. .+.+..+.+.++ .-.
T Consensus 94 ~~~~~~~~~~~~~~g~~~~t~~e~~~a~~--~---ga-D~v~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~---~~~ 162 (212)
T PRK00043 94 VADARALLGPDAIIGLSTHTLEEAAAALA--A---GA-DYVGVGPIFPTP--TKKDAKAPQGLEGLREIRAAVG---DIP 162 (212)
T ss_pred HHHHHHHcCCCCEEEEeCCCHHHHHHHhH--c---CC-CEEEECCccCCC--CCCCCCCCCCHHHHHHHHHhcC---CCC
Confidence 45666777778888888875444333222 2 21 222 2222221 2321 466777766553 234
Q ss_pred EEEEe-cCHHhHHHHHHcCCcEEEEeCC
Q 016771 337 ILFVT-DVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 337 ~l~VG-Ds~~Di~aA~~aG~~~i~v~~~ 363 (383)
++..| =+..++..+.++|...+.+.+.
T Consensus 163 v~a~GGI~~~~i~~~~~~Ga~gv~~gs~ 190 (212)
T PRK00043 163 IVAIGGITPENAPEVLEAGADGVAVVSA 190 (212)
T ss_pred EEEECCcCHHHHHHHHHcCCCEEEEeHH
Confidence 66665 3458999999999999988754
No 367
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=27.48 E-value=1.1e+02 Score=34.48 Aligned_cols=91 Identities=16% Similarity=0.179 Sum_probs=55.5
Q ss_pred CCHHHHHHHHHhCCCeEEEEcCCcHHHH-HHHHhhcCCCCccc--ceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 016771 262 DDVPEALEKWHSLGTKVYIYSSGSRLAQ-RLIFGNSNYGDLRK--YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 338 (383)
Q Consensus 262 pgv~e~L~~L~~~G~~l~IvTn~~~~~~-~~~l~~~~~~~l~~--~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l 338 (383)
.+..+.|+....+|||+.-+.++.-... -....++.-..... -|.|.+--...-|+....-..-+.+.++. .++
T Consensus 650 ~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIR---tVM 726 (1140)
T KOG0208|consen 650 ADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIR---TVM 726 (1140)
T ss_pred ccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcce---EEE
Confidence 4788899999999999877766642221 11111111001110 23332222335688776666666666664 556
Q ss_pred EEecCH-HhHHHHHHcCC
Q 016771 339 FVTDVY-QEATAAKAAGL 355 (383)
Q Consensus 339 ~VGDs~-~Di~aA~~aG~ 355 (383)
.-||+. .-|--||++||
T Consensus 727 cTGDNllTaisVakeCgm 744 (1140)
T KOG0208|consen 727 CTGDNLLTAISVAKECGM 744 (1140)
T ss_pred EcCCchheeeehhhcccc
Confidence 668998 89999999998
No 368
>TIGR02668 moaA_archaeal probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666).
Probab=27.38 E-value=1.7e+02 Score=27.90 Aligned_cols=28 Identities=18% Similarity=0.261 Sum_probs=24.1
Q ss_pred ccCCCHHHHHHHHHhCCC-eEEEEcCCcH
Q 016771 259 EVFDDVPEALEKWHSLGT-KVYIYSSGSR 286 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~-~l~IvTn~~~ 286 (383)
-+.+++.++++.+++.|+ .+.|.||+..
T Consensus 68 ll~~~l~~iv~~l~~~g~~~v~i~TNG~l 96 (302)
T TIGR02668 68 LLRKDLIEIIRRIKDYGIKDVSMTTNGIL 96 (302)
T ss_pred ccccCHHHHHHHHHhCCCceEEEEcCchH
Confidence 356889999999999998 8999999963
No 369
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=27.24 E-value=2.9e+02 Score=31.92 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=33.4
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhc
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 296 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~ 296 (383)
.++=+||.+++..|+++|+|++++|..-.+.+..+.-..
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC 688 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSC 688 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhh
Confidence 377899999999999999999999998877776665555
No 370
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=27.22 E-value=2.4e+02 Score=27.16 Aligned_cols=95 Identities=16% Similarity=0.133 Sum_probs=64.6
Q ss_pred ccCCCHHHHHHHHHhCCCe---------EEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHc
Q 016771 259 EVFDDVPEALEKWHSLGTK---------VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL 329 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~---------l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l 329 (383)
-..++..+.++.|+++ ++ +.-+|.+....++.+.... ++.-++.+ ..-.+..-..+++++.
T Consensus 168 ls~ddt~~Iv~~l~~r-~p~~~~~~~~~ICyAT~nRQ~Avk~la~~~---Dl~iVVG~------~nSSNs~rL~eiA~~~ 237 (294)
T COG0761 168 LSVDDTAEIVAALKER-FPKIEVPPFNDICYATQNRQDAVKELAPEV---DLVIVVGS------KNSSNSNRLAEIAKRH 237 (294)
T ss_pred cCHHHHHHHHHHHHHh-CccccCCcccccchhhhhHHHHHHHHhhcC---CEEEEECC------CCCccHHHHHHHHHHh
Confidence 3456788888888876 55 6666666677777777665 55434443 2233455567788888
Q ss_pred CCCCCCcEEEEecCHHhHHHHHHcCCcEEEEeCCCCCCC
Q 016771 330 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL 368 (383)
Q Consensus 330 ~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 368 (383)
|.+ ...| |+..||...-=.|..+|+++.|-+.|+
T Consensus 238 g~~----aylI-d~~~ei~~~w~~~~~~VGvTAGAStPd 271 (294)
T COG0761 238 GKP----AYLI-DDAEEIDPEWLKGVKTVGVTAGASTPD 271 (294)
T ss_pred CCC----eEEe-CChHhCCHHHhcCccEEEEecCCCCCH
Confidence 763 4555 556788888888899999999877654
No 371
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=26.80 E-value=1.2e+02 Score=30.02 Aligned_cols=56 Identities=18% Similarity=0.086 Sum_probs=35.1
Q ss_pred EEeeecCCC-------CHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHH
Q 016771 30 VVPIIENTA-------YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIK 93 (383)
Q Consensus 30 ~ipv~~n~~-------~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~ 93 (383)
.||||+=.. ...+++++|.+|.+ ..-.+-|-|||+= .+.-.+..++..-.|++-.+
T Consensus 52 ~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~---~~GFF~v~nHGi~-----~~l~~~~~~~~~~FF~LP~e 114 (361)
T PLN02758 52 DIPVIDFSRLVKGDNDELFSEILKLRLACE---EWGFFQVINHGIE-----LELLEEIEKVAREFFMLPLE 114 (361)
T ss_pred CCCeEEchhhcCCChHHHHHHHHHHHHHHH---hCeEEEEecCCCC-----HHHHHHHHHHHHHHhcCCHH
Confidence 599998542 22456778888887 3445578899973 44445555566666664333
No 372
>TIGR01101 V_ATP_synt_F vacuolar ATP synthase F subunit. This model describes the vacuolar ATP synthase F subunit (14 kDa subunit) in eukaryotes. In some archaeal species this protein subunit is referred as G subunit
Probab=26.58 E-value=1.8e+02 Score=24.04 Aligned_cols=66 Identities=3% Similarity=-0.014 Sum_probs=46.6
Q ss_pred CCHHHHHHH-HHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHc
Q 016771 262 DDVPEALEK-WHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL 329 (383)
Q Consensus 262 pgv~e~L~~-L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l 329 (383)
.++.++|++ |.+..+-+.++|..-....+..+++.. ...+.+--+-+......|..+...+-.+++
T Consensus 46 eei~~~~~~~l~~~digIIlIte~~a~~i~~~I~~~~--~~~PaIieIP~k~~~y~~~~d~i~~~~~~~ 112 (115)
T TIGR01101 46 SEIEDCFNRFLKRDDIAIILINQHIAEMIRHAVDAHT--RSIPAVLEIPSKDHPYDASKDSILRRARGM 112 (115)
T ss_pred HHHHHHHHHHhhcCCeEEEEEcHHHHHHhHHHHHhcC--CcCCEEEEECCCCCCCCCcccHHHHHHHHH
Confidence 567888998 788889999999998888888888764 444544443343455677777766655543
No 373
>PLN02276 gibberellin 20-oxidase
Probab=26.41 E-value=1.2e+02 Score=30.18 Aligned_cols=59 Identities=22% Similarity=0.218 Sum_probs=37.0
Q ss_pred EEEeeecCCC----C---HHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHH
Q 016771 29 LVVPIIENTA----Y---ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLH 95 (383)
Q Consensus 29 ~~ipv~~n~~----~---~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~ 95 (383)
..||||+=.+ + -.++++.|.+|.+ +.-.+.|.||||= .+...+..++.+-.|++-...+
T Consensus 39 ~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~---~~GFF~l~nHGI~-----~~l~~~~~~~~~~FF~LP~eeK 104 (361)
T PLN02276 39 LAVPLIDLGGFLSGDEAATAEAARLVREACL---KHGFFQVVNHGVD-----AALIRAAHEYMDAFFKLPLSEK 104 (361)
T ss_pred CCCCeEEChhhcCCChHHHHHHHHHHHHHHH---HCcEEEEEcCCCC-----HHHHHHHHHHHHHHHcCCHHHH
Confidence 4599998543 1 2457788888887 4456788999983 3344444455555666544443
No 374
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=26.30 E-value=4.5e+02 Score=23.06 Aligned_cols=93 Identities=14% Similarity=0.147 Sum_probs=53.0
Q ss_pred HHHHHHHHHhCCCeEEE--EcCCcHHHHHHHHhhcCCCCcccceeeeeccCCC-CCCCHHHHHHHHHHcCCCCCCcEEEE
Q 016771 264 VPEALEKWHSLGTKVYI--YSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVG-NKRETPSYVEITNSLGVDKPSEILFV 340 (383)
Q Consensus 264 v~e~L~~L~~~G~~l~I--vTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~-~KP~p~~~~~~~~~l~v~~p~e~l~V 340 (383)
..++++.+++.|.++++ ++..+.......+. .+. ++--+..+ +..... ....++.+..+.+.. .-.++..
T Consensus 92 ~~~~i~~~~~~g~~~~v~~~~~~t~~e~~~~~~-~~~-d~v~~~~~-~~~~~~~~~~~~~~i~~~~~~~----~~~i~~~ 164 (202)
T cd04726 92 IKKAVKAAKKYGKEVQVDLIGVEDPEKRAKLLK-LGV-DIVILHRG-IDAQAAGGWWPEDDLKKVKKLL----GVKVAVA 164 (202)
T ss_pred HHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHH-CCC-CEEEEcCc-ccccccCCCCCHHHHHHHHhhc----CCCEEEE
Confidence 57789999999999986 45555554444333 211 11111011 111111 233445555554432 2345555
Q ss_pred e-cCHHhHHHHHHcCCcEEEEeCC
Q 016771 341 T-DVYQEATAAKAAGLEVVISIRP 363 (383)
Q Consensus 341 G-Ds~~Di~aA~~aG~~~i~v~~~ 363 (383)
| =++.++..+.++|...+.+.+.
T Consensus 165 GGI~~~~i~~~~~~Gad~vvvGsa 188 (202)
T cd04726 165 GGITPDTLPEFKKAGADIVIVGRA 188 (202)
T ss_pred CCcCHHHHHHHHhcCCCEEEEeeh
Confidence 4 5568999999999999988875
No 375
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription]
Probab=26.22 E-value=3.4e+02 Score=24.71 Aligned_cols=73 Identities=15% Similarity=0.180 Sum_probs=45.9
Q ss_pred HHHHHHHHhCCCeEEEEcCCcHH-HHHHHHhh-cCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCC-CcEEEEe
Q 016771 265 PEALEKWHSLGTKVYIYSSGSRL-AQRLIFGN-SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKP-SEILFVT 341 (383)
Q Consensus 265 ~e~L~~L~~~G~~l~IvTn~~~~-~~~~~l~~-~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p-~e~l~VG 341 (383)
..+++.|+++ |+++++||.-.. .-...+.+ .+ . +.+.. .....+.-+..+...+++++....+ -+.+||+
T Consensus 31 e~~~~~L~~~-~~~aVI~~Di~t~~Da~~l~~~~g---~-~i~~v--~TG~~CH~da~m~~~ai~~l~~~~~~~Dll~iE 103 (202)
T COG0378 31 EKTLRALKDE-YKIAVITGDIYTKEDADRLRKLPG---E-PIIGV--ETGKGCHLDASMNLEAIEELVLDFPDLDLLFIE 103 (202)
T ss_pred HHHHHHHHhh-CCeEEEeceeechhhHHHHHhCCC---C-eeEEe--ccCCccCCcHHHHHHHHHHHhhcCCcCCEEEEe
Confidence 3577888887 999999998543 22233444 32 1 11211 2221234678889999999987623 4999998
Q ss_pred cCH
Q 016771 342 DVY 344 (383)
Q Consensus 342 Ds~ 344 (383)
..-
T Consensus 104 s~G 106 (202)
T COG0378 104 SVG 106 (202)
T ss_pred cCc
Confidence 765
No 376
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=26.04 E-value=2.3e+02 Score=28.98 Aligned_cols=101 Identities=18% Similarity=0.117 Sum_probs=66.4
Q ss_pred ccCCCHHHHHHHHHhC-CCeEEEEc-CC-cHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 259 EVFDDVPEALEKWHSL-GTKVYIYS-SG-SRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~-G~~l~IvT-n~-~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
...|.+.+-|+.|.++ |++++=.. +. +.+.++..++.+...+ ++++.- |..++..-+.+++.++.+-..+-.|+
T Consensus 138 ~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~al~~ak~~~-~DvvIv--DTAGRl~ide~Lm~El~~Ik~~~~P~ 214 (451)
T COG0541 138 TYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAALEKAKEEG-YDVVIV--DTAGRLHIDEELMDELKEIKEVINPD 214 (451)
T ss_pred cCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHHHHHHHHcC-CCEEEE--eCCCcccccHHHHHHHHHHHhhcCCC
Confidence 4669999999999876 55555442 32 4456677777664322 244433 55566677889998887655443399
Q ss_pred cEEEEecCHHhHHHH-------HHcCCcEEEEeC
Q 016771 336 EILFVTDVYQEATAA-------KAAGLEVVISIR 362 (383)
Q Consensus 336 e~l~VGDs~~Di~aA-------~~aG~~~i~v~~ 362 (383)
|+++|=|+..+=.|+ .+.|+..|.++.
T Consensus 215 E~llVvDam~GQdA~~~A~aF~e~l~itGvIlTK 248 (451)
T COG0541 215 ETLLVVDAMIGQDAVNTAKAFNEALGITGVILTK 248 (451)
T ss_pred eEEEEEecccchHHHHHHHHHhhhcCCceEEEEc
Confidence 999999998544433 245788777764
No 377
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=25.81 E-value=2.6e+02 Score=24.36 Aligned_cols=81 Identities=16% Similarity=0.249 Sum_probs=46.3
Q ss_pred CHHHHHHHHHhCCCeEEEEcCCcHHHHH--HHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEE
Q 016771 263 DVPEALEKWHSLGTKVYIYSSGSRLAQR--LIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFV 340 (383)
Q Consensus 263 gv~e~L~~L~~~G~~l~IvTn~~~~~~~--~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~V 340 (383)
=+.++++.+.++|++++++-+.+....+ ..+++.. .++ -+.++.+.. . ++.-...+++..+-. .-++++|
T Consensus 36 l~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~y-P~l--~ivg~~~g~---f-~~~~~~~i~~~I~~~-~pdiv~v 107 (172)
T PF03808_consen 36 LFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRY-PGL--RIVGYHHGY---F-DEEEEEAIINRINAS-GPDIVFV 107 (172)
T ss_pred HHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHC-CCe--EEEEecCCC---C-ChhhHHHHHHHHHHc-CCCEEEE
Confidence 3456777888889999999988654332 2222220 011 223311111 1 556666777776665 6689999
Q ss_pred ecCH--HhHHHHH
Q 016771 341 TDVY--QEATAAK 351 (383)
Q Consensus 341 GDs~--~Di~aA~ 351 (383)
|=.. .+.-.++
T Consensus 108 glG~PkQE~~~~~ 120 (172)
T PF03808_consen 108 GLGAPKQERWIAR 120 (172)
T ss_pred ECCCCHHHHHHHH
Confidence 9654 4554443
No 378
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=25.44 E-value=38 Score=32.19 Aligned_cols=15 Identities=33% Similarity=0.496 Sum_probs=0.0
Q ss_pred eEEEecccCCCcccc
Q 016771 142 RCIVLDIEGTTTPIS 156 (383)
Q Consensus 142 kaVlFDlDGTL~d~~ 156 (383)
|.++.|+|+||+.++
T Consensus 90 k~lVLDLDeTLvHss 104 (262)
T KOG1605|consen 90 KTLVLDLDETLVHSS 104 (262)
T ss_pred ceEEEeCCCcccccc
No 379
>smart00052 EAL Putative diguanylate phosphodiesterase. Putative diguanylate phosphodiesterase, present in a variety of bacteria.
Probab=25.37 E-value=3.5e+02 Score=23.99 Aligned_cols=85 Identities=12% Similarity=0.197 Sum_probs=48.0
Q ss_pred HHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeecc----CCCCCC-CHHHHH---HHHHHcCCCCCC
Q 016771 264 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT----AVGNKR-ETPSYV---EITNSLGVDKPS 335 (383)
Q Consensus 264 v~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~----~~~~KP-~p~~~~---~~~~~l~v~~p~ 335 (383)
+.++++.|++.|++++|=-=+.....-..+..+. .+++.- |. .....+ ...... .+++.+|+
T Consensus 135 ~~~~i~~l~~~G~~ialddfg~~~~~~~~l~~l~----~d~iKl--d~~~~~~~~~~~~~~~~l~~l~~~~~~~~~---- 204 (241)
T smart00052 135 AVATLQRLRELGVRIALDDFGTGYSSLSYLKRLP----VDLLKI--DKSFVRDLQTDPEDEAIVQSIIELAQKLGL---- 204 (241)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCcHHHHHHHHhCC----CCeEEE--CHHHHhhhccChhHHHHHHHHHHHHHHCCC----
Confidence 4488999999999998854333333333444442 122221 11 011122 222333 33444444
Q ss_pred cEEEEe-cCHHhHHHHHHcCCcEE
Q 016771 336 EILFVT-DVYQEATAAKAAGLEVV 358 (383)
Q Consensus 336 e~l~VG-Ds~~Di~aA~~aG~~~i 358 (383)
.++.=| ++..+...+++.|+..+
T Consensus 205 ~via~gVe~~~~~~~l~~~Gi~~~ 228 (241)
T smart00052 205 QVVAEGVETPEQLDLLRSLGCDYG 228 (241)
T ss_pred eEEEecCCCHHHHHHHHHcCCCEE
Confidence 466666 77899999999999754
No 380
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=25.15 E-value=96 Score=34.67 Aligned_cols=45 Identities=18% Similarity=0.296 Sum_probs=29.4
Q ss_pred eeecCCCCHHHHHHHHHHHHHhCCC-C------eEEEEccccceeecCCHHH
Q 016771 32 PIIENTAYENELTDSLAKAIDAYPK-A------TAVLVRNHGIYVWGDSWIN 76 (383)
Q Consensus 32 pv~~n~~~~~~l~~~~~~~~~~~p~-~------~a~Li~~HG~~~wG~~~~~ 76 (383)
.|.-|--|+.+.|+.+.++|.-.+. + .-=-|+.|=+..|.++.-.
T Consensus 496 Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~ 547 (854)
T PLN02205 496 AIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQ 547 (854)
T ss_pred CeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 5777999999999999999972111 0 1122466777777665443
No 381
>PF13911 AhpC-TSA_2: AhpC/TSA antioxidant enzyme
Probab=24.93 E-value=2.8e+02 Score=22.02 Aligned_cols=31 Identities=13% Similarity=0.124 Sum_probs=25.2
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHhhc
Q 016771 266 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 296 (383)
Q Consensus 266 e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~ 296 (383)
+....|++.|+++.+|+-++.+..+...+..
T Consensus 4 ~~~~~l~~~gv~lv~I~~g~~~~~~~f~~~~ 34 (115)
T PF13911_consen 4 RRKPELEAAGVKLVVIGCGSPEGIEKFCELT 34 (115)
T ss_pred HhHHHHHHcCCeEEEEEcCCHHHHHHHHhcc
Confidence 4567788899999999999996677777665
No 382
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=24.51 E-value=1e+02 Score=26.40 Aligned_cols=36 Identities=11% Similarity=0.108 Sum_probs=26.7
Q ss_pred CCCHHHHHHHHHhCCCeEEEEcCCcHH-HHHHHHhhc
Q 016771 261 FDDVPEALEKWHSLGTKVYIYSSGSRL-AQRLIFGNS 296 (383)
Q Consensus 261 ~pgv~e~L~~L~~~G~~l~IvTn~~~~-~~~~~l~~~ 296 (383)
.+++.++++.++++|+++.|.||.... ....+++.+
T Consensus 74 ~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~i 110 (147)
T TIGR02826 74 REALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHL 110 (147)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhC
Confidence 367889999999999999999997542 333444433
No 383
>cd00956 Transaldolase_FSA Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea, which are member of the MipB/TalC subfamily of class I aldolases. FSA catalyze an aldol cleavage of fructose 6-phosphate and do not utilize fructose, fructose 1-phosphate, fructose 1,6-phosphate, or dihydroxyacetone phosphate. The enzymes belong to the transaldolase family that serves in transfer reactions in the pentose phosphate cycle, and are more distantly related to fructose 1,6-bisphosphate aldolase.
Probab=24.47 E-value=5.2e+02 Score=23.47 Aligned_cols=100 Identities=19% Similarity=0.122 Sum_probs=59.6
Q ss_pred cccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccC-CCCCCCHHHH---HHHHHHcCC
Q 016771 256 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTA-VGNKRETPSY---VEITNSLGV 331 (383)
Q Consensus 256 ~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~-~~~KP~p~~~---~~~~~~l~v 331 (383)
.+++.-....+.++.|++.|+++.+-+=-+........+ .|. ++++.|+.-. ....+--..+ ..++++.++
T Consensus 82 iKIP~T~~gl~ai~~L~~~gi~v~~T~V~s~~Qa~~Aa~-AGA----~yvsP~vgR~~~~g~dg~~~i~~i~~~~~~~~~ 156 (211)
T cd00956 82 VKIPVTEDGLKAIKKLSEEGIKTNVTAIFSAAQALLAAK-AGA----TYVSPFVGRIDDLGGDGMELIREIRTIFDNYGF 156 (211)
T ss_pred EEEcCcHhHHHHHHHHHHcCCceeeEEecCHHHHHHHHH-cCC----CEEEEecChHhhcCCCHHHHHHHHHHHHHHcCC
Confidence 345566677889999999999887666555554444443 322 3344433220 0111222333 334555564
Q ss_pred CCCCcEEEEe-cCHHhHHHHHHcCCcEEEEeC
Q 016771 332 DKPSEILFVT-DVYQEATAAKAAGLEVVISIR 362 (383)
Q Consensus 332 ~~p~e~l~VG-Ds~~Di~aA~~aG~~~i~v~~ 362 (383)
+.+++.-| =++.++..|..+|++.+-+..
T Consensus 157 --~tkil~As~r~~~ei~~a~~~Gad~vTv~~ 186 (211)
T cd00956 157 --DTKILAASIRNPQHVIEAALAGADAITLPP 186 (211)
T ss_pred --CceEEecccCCHHHHHHHHHcCCCEEEeCH
Confidence 35666655 345899999999999987763
No 384
>PRK13361 molybdenum cofactor biosynthesis protein A; Provisional
Probab=24.22 E-value=2.2e+02 Score=27.70 Aligned_cols=28 Identities=18% Similarity=0.224 Sum_probs=23.1
Q ss_pred ccCCCHHHHHHHHHhCCC--eEEEEcCCcH
Q 016771 259 EVFDDVPEALEKWHSLGT--KVYIYSSGSR 286 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~--~l~IvTn~~~ 286 (383)
-+.++..++++.+++.+. .+.|.||+..
T Consensus 73 llr~dl~~li~~i~~~~~l~~i~itTNG~l 102 (329)
T PRK13361 73 LVRRGCDQLVARLGKLPGLEELSLTTNGSR 102 (329)
T ss_pred CccccHHHHHHHHHhCCCCceEEEEeChhH
Confidence 456899999999998764 7999999863
No 385
>PF13540 RCC1_2: Regulator of chromosome condensation (RCC1) repeat; PDB: 3QI0_D 1JTD_B 3QHY_B.
Probab=24.21 E-value=57 Score=19.76 Aligned_cols=16 Identities=38% Similarity=0.920 Sum_probs=10.3
Q ss_pred eEEEEccccceeecCC
Q 016771 58 TAVLVRNHGIYVWGDS 73 (383)
Q Consensus 58 ~a~Li~~HG~~~wG~~ 73 (383)
..+|..+.=+|+||.+
T Consensus 11 t~al~~~g~v~~wG~n 26 (30)
T PF13540_consen 11 TCALTSDGEVYCWGDN 26 (30)
T ss_dssp EEEEE-TTEEEEEE--
T ss_pred EEEEEcCCCEEEEcCC
Confidence 3566777889999976
No 386
>PLN02951 Molybderin biosynthesis protein CNX2
Probab=23.97 E-value=2.3e+02 Score=28.19 Aligned_cols=28 Identities=21% Similarity=0.316 Sum_probs=22.8
Q ss_pred ccCCCHHHHHHHHHhC-CCe-EEEEcCCcH
Q 016771 259 EVFDDVPEALEKWHSL-GTK-VYIYSSGSR 286 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~-G~~-l~IvTn~~~ 286 (383)
-+.|++.++++.+++. |+. +.|.||+..
T Consensus 118 llr~dl~eli~~l~~~~gi~~i~itTNG~l 147 (373)
T PLN02951 118 TLRKDIEDICLQLSSLKGLKTLAMTTNGIT 147 (373)
T ss_pred cchhhHHHHHHHHHhcCCCceEEEeeCcch
Confidence 4568899999999986 875 889999953
No 387
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.93 E-value=4.9e+02 Score=26.49 Aligned_cols=100 Identities=17% Similarity=0.113 Sum_probs=59.7
Q ss_pred ccCCCHHHHHHHHHhC-CCeEEEE-cCC-cHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCC
Q 016771 259 EVFDDVPEALEKWHSL-GTKVYIY-SSG-SRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 335 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~-G~~l~Iv-Tn~-~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~ 335 (383)
...+|+.+-|+....+ +++.+.- |-. +......-++++.-.+ +++|.- |..+..|-+..+|.+..+-.+.-.|+
T Consensus 139 TFRagAfDQLkqnA~k~~iP~ygsyte~dpv~ia~egv~~fKke~-fdvIIv--DTSGRh~qe~sLfeEM~~v~~ai~Pd 215 (483)
T KOG0780|consen 139 TFRAGAFDQLKQNATKARVPFYGSYTEADPVKIASEGVDRFKKEN-FDVIIV--DTSGRHKQEASLFEEMKQVSKAIKPD 215 (483)
T ss_pred ccccchHHHHHHHhHhhCCeeEecccccchHHHHHHHHHHHHhcC-CcEEEE--eCCCchhhhHHHHHHHHHHHhhcCCC
Confidence 4568888888876544 5554442 111 1222223333332222 234443 66677899999999988766543399
Q ss_pred cEEEEecCHHhHHHHHH-------cCCcEEEEe
Q 016771 336 EILFVTDVYQEATAAKA-------AGLEVVISI 361 (383)
Q Consensus 336 e~l~VGDs~~Di~aA~~-------aG~~~i~v~ 361 (383)
+++||=|+-.+-.|..+ +++..+.++
T Consensus 216 ~vi~VmDasiGQaae~Qa~aFk~~vdvg~vIlT 248 (483)
T KOG0780|consen 216 EIIFVMDASIGQAAEAQARAFKETVDVGAVILT 248 (483)
T ss_pred eEEEEEeccccHhHHHHHHHHHHhhccceEEEE
Confidence 99999998865555433 455555554
No 388
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=23.79 E-value=84 Score=30.53 Aligned_cols=30 Identities=10% Similarity=0.147 Sum_probs=24.6
Q ss_pred ccccccCCCHHHHHHHHHhCCCeEEEEcCC
Q 016771 255 ELEGEVFDDVPEALEKWHSLGTKVYIYSSG 284 (383)
Q Consensus 255 ~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~ 284 (383)
......||+.+++++.|+++|+++.+..+.
T Consensus 57 ~~d~~~FPdp~~~i~~l~~~g~k~~~~~~P 86 (317)
T cd06600 57 TWDPYRFPEPKKLIDELHKRNVKLVTIVDP 86 (317)
T ss_pred eechhcCCCHHHHHHHHHHCCCEEEEEeec
Confidence 344568999999999999999998877543
No 389
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=23.73 E-value=79 Score=30.47 Aligned_cols=28 Identities=21% Similarity=0.428 Sum_probs=24.0
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSG 284 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~ 284 (383)
...-||+.++++++|+++|+++.+..+.
T Consensus 65 d~~~FPdp~~mi~~l~~~G~k~~l~i~P 92 (303)
T cd06592 65 DPTKFPDPKGMIDQLHDLGFRVTLWVHP 92 (303)
T ss_pred ChhhCCCHHHHHHHHHHCCCeEEEEECC
Confidence 3457999999999999999999887654
No 390
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=23.61 E-value=72 Score=30.04 Aligned_cols=43 Identities=33% Similarity=0.464 Sum_probs=34.8
Q ss_pred CCCCH----HHHHHHHHHcCCC-CCCcEEEEecCH-HhHHHHHHcCCcE
Q 016771 315 NKRET----PSYVEITNSLGVD-KPSEILFVTDVY-QEATAAKAAGLEV 357 (383)
Q Consensus 315 ~KP~p----~~~~~~~~~l~v~-~p~e~l~VGDs~-~Di~aA~~aG~~~ 357 (383)
-||.| ++|+.-++.+|++ ..+++-||+|.. +-..+|--.|+.+
T Consensus 80 iKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWEV 128 (279)
T cd00733 80 IKPSPDNIQELYLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWEV 128 (279)
T ss_pred ECCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEE
Confidence 46666 5777789999998 236899999998 8889999988864
No 391
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=23.55 E-value=2.8e+02 Score=25.68 Aligned_cols=23 Identities=4% Similarity=-0.067 Sum_probs=13.2
Q ss_pred ccCCCHHHHHHHHHhCCCeEEEE
Q 016771 259 EVFDDVPEALEKWHSLGTKVYIY 281 (383)
Q Consensus 259 ~~~pgv~e~L~~L~~~G~~l~Iv 281 (383)
++-++..++.+.|++.|+....+
T Consensus 10 Rp~~~~~~l~~~l~~~G~~~~~~ 32 (255)
T PRK05752 10 RPAEECAALAASLAEAGIFSSSL 32 (255)
T ss_pred CcHHHHHHHHHHHHHcCCCEEEc
Confidence 45555566666666666555443
No 392
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=23.39 E-value=4.1e+02 Score=26.90 Aligned_cols=62 Identities=16% Similarity=0.141 Sum_probs=40.5
Q ss_pred eEEEEcCCcHHHHHHHHhhcCCCCccccee-eeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 016771 277 KVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-GFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 341 (383)
Q Consensus 277 ~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~-~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VG 341 (383)
+++|+|+.+......+++.+.-. ++.+. .+|.....+.-.+..+..+++..+-. .-+++.|+
T Consensus 137 ~I~viTs~~gAa~~D~~~~~~~r--~p~~~~~~~~~~vQG~~A~~~i~~al~~~~~~-~~Dviii~ 199 (438)
T PRK00286 137 RIGVITSPTGAAIRDILTVLRRR--FPLVEVIIYPTLVQGEGAAASIVAAIERANAR-GEDVLIVA 199 (438)
T ss_pred EEEEEeCCccHHHHHHHHHHHhc--CCCCeEEEecCcCcCccHHHHHHHHHHHhcCC-CCCEEEEe
Confidence 89999999999888888876422 22111 12233444566677778888777653 34778875
No 393
>PF04295 GD_AH_C: D-galactarate dehydratase / Altronate hydrolase, C terminus; InterPro: IPR007392 This domain is found at the C terminus of D-galactarate dehydratase (4.2.1.42 from EC) which is thought to catalyse the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, [] and altronate hydrolase (altronic acid hydratase, 4.2.1.7 from EC), which catalyses D-altronate = 2-keto-2-deoxygluconate + H2O []. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core []. The N-terminal is represented by IPR007389 from INTERPRO.; GO: 0016836 hydro-lyase activity
Probab=23.31 E-value=1.7e+02 Score=29.57 Aligned_cols=85 Identities=18% Similarity=0.113 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEccccceee-cCCH-----------------HHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016771 39 YENELTDSLAKAIDAYPKATAVLVRNHGIYVW-GDSW-----------------INAKTQAECYHYLFDAAIKLHQLGLD 100 (383)
Q Consensus 39 ~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~w-G~~~-----------------~~a~~~~e~~e~l~~~~~~~~~~~~~ 100 (383)
|.+ +..++..-+..||..-|||+=++|--.- -+.+ ++.--...++|...+..-++.+. ..
T Consensus 68 d~e-~~~rtL~g~a~hPNvggvlvvgLGCE~~~~~~l~~~i~~~g~kpv~~l~iQ~~GGt~~~i~~~~~~~~~l~~~-a~ 145 (396)
T PF04295_consen 68 DLE-LTRRTLAGLARHPNVGGVLVVGLGCENNQPERLAEAIAERGPKPVEFLSIQEEGGTEDTIEAGVELARELLEE-AN 145 (396)
T ss_pred hHH-HHHHHHHHHccCCCeeeEEEEecCCccCcHHHHHHhhhccCCCceEEEEEeehhhHHHHHHHHHHHHHHHHHH-hc
Confidence 444 3333444456699999999998875321 1111 11100012222222222222221 11
Q ss_pred CCCCCCCCccccccccCCCCCcccc
Q 016771 101 WSTPNHGPTRNFKLGLGSNGNVNTS 125 (383)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (383)
..-...+|.+++.+|+.|+|+-.+|
T Consensus 146 ~~~R~~~p~s~L~vgl~CGGSD~~S 170 (396)
T PF04295_consen 146 AQQREPVPLSELVVGLKCGGSDATS 170 (396)
T ss_pred cCCcccccHHHeEEeeecCCCCccc
Confidence 1122558999999999999997776
No 394
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=23.30 E-value=2.7e+02 Score=27.76 Aligned_cols=26 Identities=23% Similarity=0.401 Sum_probs=22.1
Q ss_pred CCHHHHHHHHHhCCCeEEEEcCCcHH
Q 016771 262 DDVPEALEKWHSLGTKVYIYSSGSRL 287 (383)
Q Consensus 262 pgv~e~L~~L~~~G~~l~IvTn~~~~ 287 (383)
....+.+..|+++|+++.|+|++...
T Consensus 31 ~~l~~~ia~L~~~G~eVilVSSGAia 56 (369)
T COG0263 31 EELVRQVAALHKAGHEVVLVSSGAIA 56 (369)
T ss_pred HHHHHHHHHHHhCCCEEEEEccchhh
Confidence 46677899999999999999999643
No 395
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=23.23 E-value=2.9e+02 Score=28.65 Aligned_cols=100 Identities=17% Similarity=0.088 Sum_probs=58.7
Q ss_pred ccccCCCHHHHHHHHHhCC--CeEEEEcCCcHHHHHHHHhhcCCCCcccc-eeeeeccCCCC-CCCHHHHHHHHHHcC--
Q 016771 257 EGEVFDDVPEALEKWHSLG--TKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGN-KRETPSYVEITNSLG-- 330 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G--~~l~IvTn~~~~~~~~~l~~~~~~~l~~~-v~~~~d~~~~~-KP~p~~~~~~~~~l~-- 330 (383)
.++..|.+.+.+.++...+ +..-.+ .......+.+.+++...... +.+ ...... +|..++...+.+..+
T Consensus 127 ~Cp~Cp~~v~~~~~~a~~~~~i~~~~i---d~~~~~~~~~~~~v~~VP~~~i~~--~~~~~g~~~~~~~~~~~~~~~~~~ 201 (517)
T PRK15317 127 SCHNCPDVVQALNLMAVLNPNITHTMI---DGALFQDEVEARNIMAVPTVFLNG--EEFGQGRMTLEEILAKLDTGAAAR 201 (517)
T ss_pred CCCCcHHHHHHHHHHHHhCCCceEEEE---EchhCHhHHHhcCCcccCEEEECC--cEEEecCCCHHHHHHHHhcccccc
Confidence 3577799999999998763 332222 33334445556654444332 222 112223 444444444443322
Q ss_pred -------CCCCCcEEEEecCHHhHHHHHH---cCCcEEEEeC
Q 016771 331 -------VDKPSEILFVTDVYQEATAAKA---AGLEVVISIR 362 (383)
Q Consensus 331 -------v~~p~e~l~VGDs~~Di~aA~~---aG~~~i~v~~ 362 (383)
.. .-++++||-++.++.+|.. .|.+++.+..
T Consensus 202 ~~~~~~~~~-~~dvvIIGgGpaGl~aA~~la~~G~~v~li~~ 242 (517)
T PRK15317 202 AAEELNAKD-PYDVLVVGGGPAGAAAAIYAARKGIRTGIVAE 242 (517)
T ss_pred chhhcccCC-CCCEEEECCCHHHHHHHHHHHHCCCcEEEEec
Confidence 22 4589999999999988864 5888888864
No 396
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=23.20 E-value=69 Score=25.86 Aligned_cols=30 Identities=17% Similarity=0.013 Sum_probs=24.6
Q ss_pred CCCHHHHHHHHHhCCCeEEEEcCCcHHHHH
Q 016771 261 FDDVPEALEKWHSLGTKVYIYSSGSRLAQR 290 (383)
Q Consensus 261 ~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~ 290 (383)
-+++.+.++.++++|.++..+|+.+.....
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~s~la 88 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVGSTLA 88 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCChHH
Confidence 467889999999999999999998655443
No 397
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=23.07 E-value=90 Score=30.60 Aligned_cols=30 Identities=23% Similarity=0.226 Sum_probs=25.1
Q ss_pred ccccccCCCHHHHHHHHHhCCCeEEEEcCC
Q 016771 255 ELEGEVFDDVPEALEKWHSLGTKVYIYSSG 284 (383)
Q Consensus 255 ~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~ 284 (383)
......||+...+++.|+++|+++.+..+.
T Consensus 57 ~~d~~~FPdp~~mi~~L~~~G~k~~~~~~P 86 (339)
T cd06603 57 TWDKKKFPDPEKMQEKLASKGRKLVTIVDP 86 (339)
T ss_pred EeCcccCCCHHHHHHHHHHCCCEEEEEecC
Confidence 344568999999999999999999887653
No 398
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=22.73 E-value=1.8e+02 Score=23.98 Aligned_cols=55 Identities=13% Similarity=0.208 Sum_probs=35.0
Q ss_pred EEeeecCCC------CHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHH
Q 016771 30 VVPIIENTA------YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAI 92 (383)
Q Consensus 30 ~ipv~~n~~------~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~ 92 (383)
.||||+=.. +-.++++.|.++.. ..-.+.|-|||+-. +...+..++...+|++-.
T Consensus 37 ~iPvIDls~~~~~~~~~~~~~~~L~~A~~---~~GFf~l~nhGi~~-----elid~~~~~~~~FF~LP~ 97 (120)
T PLN03176 37 EIPVISIAGIDDGGEKRAEICNKIVEACE---EWGVFQIVDHGVDA-----KLVSEMTTLAKEFFALPP 97 (120)
T ss_pred CCCeEECccccCCchHHHHHHHHHHHHHH---HCCEEEEECCCCCH-----HHHHHHHHHHHHHHCCCH
Confidence 588887653 23457788888887 34567888999863 444455555555555333
No 399
>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated
Probab=22.73 E-value=77 Score=29.93 Aligned_cols=43 Identities=30% Similarity=0.407 Sum_probs=34.7
Q ss_pred CCCCH----HHHHHHHHHcCCC-CCCcEEEEecCH-HhHHHHHHcCCcE
Q 016771 315 NKRET----PSYVEITNSLGVD-KPSEILFVTDVY-QEATAAKAAGLEV 357 (383)
Q Consensus 315 ~KP~p----~~~~~~~~~l~v~-~p~e~l~VGDs~-~Di~aA~~aG~~~ 357 (383)
-||.| ++|+.-++.+|++ ..+++-||+|.. +-..+|--.|+.+
T Consensus 84 lKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEV 132 (283)
T PRK09348 84 LKPSPDNIQELYLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWEV 132 (283)
T ss_pred EcCCCccHHHHHHHHHHHhCCCccccceeEeecCCCCCcccccccceEE
Confidence 46766 5777889999998 236899999998 8888999888864
No 400
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=22.54 E-value=38 Score=35.25 Aligned_cols=23 Identities=26% Similarity=0.561 Sum_probs=17.5
Q ss_pred CeEEEecccCCCccccccchhhhhHHH
Q 016771 141 PRCIVLDIEGTTTPISFVSEVLFPYAR 167 (383)
Q Consensus 141 ikaVlFDlDGTL~d~~~v~~~l~~~~~ 167 (383)
-+++++|+||||+-+.. .|||+.
T Consensus 50 ~~t~v~d~~g~Ll~s~s----~Fpyfm 72 (525)
T PLN02588 50 NHTLIFNVEGALLKSNS----LFPYFM 72 (525)
T ss_pred cceEEEecccceeccCC----CCccee
Confidence 36799999999997542 577764
No 401
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=22.49 E-value=91 Score=30.53 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=25.7
Q ss_pred hhccccccccCCCHHHHHHHHHhCCCeEEEEcC
Q 016771 251 FESNELEGEVFDDVPEALEKWHSLGTKVYIYSS 283 (383)
Q Consensus 251 y~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn 283 (383)
|.........||+..++++.|+++|+++.+..+
T Consensus 53 ~~~f~~d~~~fPdp~~m~~~l~~~g~~~~~~~~ 85 (339)
T cd06604 53 YRVFTWDKERFPDPKELIKELHEQGFKVVTIID 85 (339)
T ss_pred CCceeeccccCCCHHHHHHHHHHCCCEEEEEEe
Confidence 333344457899999999999999999987654
No 402
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=22.43 E-value=76 Score=31.53 Aligned_cols=36 Identities=19% Similarity=0.357 Sum_probs=27.0
Q ss_pred EEEeeecCCC----C---HHHHHHHHHHHHHhCCCCeEEEEccccc
Q 016771 29 LVVPIIENTA----Y---ENELTDSLAKAIDAYPKATAVLVRNHGI 67 (383)
Q Consensus 29 ~~ipv~~n~~----~---~~~l~~~~~~~~~~~p~~~a~Li~~HG~ 67 (383)
..||||+=.. + -.+++++|.+|.+ +.-.+.|.||||
T Consensus 50 ~~iPvIDls~l~~~~~~~r~~~~~~l~~Ac~---~~GFF~l~nHGI 92 (362)
T PLN02393 50 INIPVIDLSSLFSDDARLRDATLRAISEACR---EWGFFQVVNHGV 92 (362)
T ss_pred CCCCeEECccccCCChHHHHHHHHHHHHHHH---HCcEEEEEeCCC
Confidence 3599998543 2 2678888999998 455778889998
No 403
>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]
Probab=22.41 E-value=4.7e+02 Score=26.25 Aligned_cols=81 Identities=16% Similarity=0.329 Sum_probs=51.0
Q ss_pred cCCCHHHHHHHHHhCCCeEEEE-----------------cCCcHHHHHHHHhhcCCCCccc-ceeee--eccCCCCCCCH
Q 016771 260 VFDDVPEALEKWHSLGTKVYIY-----------------SSGSRLAQRLIFGNSNYGDLRK-YLSGF--FDTAVGNKRET 319 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~Iv-----------------Tn~~~~~~~~~l~~~~~~~l~~-~v~~~--~d~~~~~KP~p 319 (383)
+-|-...+|++|+++|.+++-+ +.++....+..++.++..+... +|..+ ||...+.+.++
T Consensus 222 ~~P~~~tvl~~L~e~g~~vi~IGKI~DI~~~~Git~~~~~~~n~~~~d~tl~~~~~~~~~~~vFtNlVdfD~~yGHRrDv 301 (397)
T COG1015 222 VKPFAPTVLDKLKEAGRPVIAIGKIADIYAGQGITEKVKAVSNMDGMDVTLEEMKTAEFNGLVFTNLVDFDSLYGHRRDV 301 (397)
T ss_pred cCCChhhHHHHHHHcCCceEEEeeHHhhhccccccccccCCCcHHHHHHHHHHHhcCCCCcEEEEeeeecccccccccch
Confidence 3355578999999999877654 2334555555555553212221 22222 25556788999
Q ss_pred HHHHHHHHHc---------CCCCCCcEEEEe
Q 016771 320 PSYVEITNSL---------GVDKPSEILFVT 341 (383)
Q Consensus 320 ~~~~~~~~~l---------~v~~p~e~l~VG 341 (383)
.-|..+++.+ .++ ++++++|-
T Consensus 302 ~gYa~aLe~FD~rL~e~~~~l~-edDlLiiT 331 (397)
T COG1015 302 AGYAAALEEFDRRLPELIENLR-EDDLLIIT 331 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCEEEEe
Confidence 9999998765 355 78888875
No 404
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=22.29 E-value=41 Score=33.83 Aligned_cols=18 Identities=11% Similarity=-0.031 Sum_probs=15.6
Q ss_pred CCCeEEEecccCCCcccc
Q 016771 139 LFPRCIVLDIEGTTTPIS 156 (383)
Q Consensus 139 ~~ikaVlFDlDGTL~d~~ 156 (383)
..|.+|-||||+||....
T Consensus 25 ~~i~~~GfdmDyTL~~Y~ 42 (424)
T KOG2469|consen 25 ENIGIVGFDMDYTLARYN 42 (424)
T ss_pred hcCcEEeeccccchhhhc
Confidence 468999999999999753
No 405
>PRK00407 hypothetical protein; Provisional
Probab=22.21 E-value=64 Score=27.45 Aligned_cols=18 Identities=28% Similarity=0.379 Sum_probs=14.6
Q ss_pred cccceeecCCHHHHHHHH
Q 016771 64 NHGIYVWGDSWINAKTQA 81 (383)
Q Consensus 64 ~HG~~~wG~~~~~a~~~~ 81 (383)
-=|+-+||+|+++|+..+
T Consensus 12 Dv~i~~~g~tleE~F~~a 29 (139)
T PRK00407 12 DIGIRAYGRTLEEAFENA 29 (139)
T ss_pred hEEEEEEECCHHHHHHHH
Confidence 337889999999998763
No 406
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=22.15 E-value=1e+02 Score=30.24 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=27.4
Q ss_pred hhhccccccccCCCHHHHHHHHHhCCCeEEEEcCC
Q 016771 250 GFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSG 284 (383)
Q Consensus 250 ~y~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~ 284 (383)
.|........-||+.++++++|+++|+++.+....
T Consensus 52 ~~~~Ft~d~~~FPdp~~mv~~L~~~G~klv~~i~P 86 (332)
T cd06601 52 NYRTFTTNGGGFPNPKEMFDNLHNKGLKCSTNITP 86 (332)
T ss_pred CCCceeecCCCCCCHHHHHHHHHHCCCeEEEEecC
Confidence 34444445578999999999999999999887654
No 407
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=22.08 E-value=3.3e+02 Score=23.74 Aligned_cols=80 Identities=23% Similarity=0.341 Sum_probs=42.0
Q ss_pred HHHHHHHHHhCCCeEEEEcCCcHHHHHH--HHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 016771 264 VPEALEKWHSLGTKVYIYSSGSRLAQRL--IFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 341 (383)
Q Consensus 264 v~e~L~~L~~~G~~l~IvTn~~~~~~~~--~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VG 341 (383)
+.++++.+.+++.+++++-+.+....+. .++.. ..++ .+.++.+.......+++ +++..+-. .-++|+||
T Consensus 35 ~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~-yp~l--~i~g~~~g~~~~~~~~~----i~~~I~~~-~pdiv~vg 106 (171)
T cd06533 35 MPALLELAAQKGLRVFLLGAKPEVLEKAAERLRAR-YPGL--KIVGYHHGYFGPEEEEE----IIERINAS-GADILFVG 106 (171)
T ss_pred HHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHH-CCCc--EEEEecCCCCChhhHHH----HHHHHHHc-CCCEEEEE
Confidence 3467788888899999998776544432 12222 0111 12221121111122222 55566655 67899999
Q ss_pred cC-H-HhHHHHH
Q 016771 342 DV-Y-QEATAAK 351 (383)
Q Consensus 342 Ds-~-~Di~aA~ 351 (383)
=+ + ...-+++
T Consensus 107 lG~PkQE~~~~~ 118 (171)
T cd06533 107 LGAPKQELWIAR 118 (171)
T ss_pred CCCCHHHHHHHH
Confidence 54 4 4444443
No 408
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=21.92 E-value=3.6e+02 Score=24.40 Aligned_cols=97 Identities=12% Similarity=0.117 Sum_probs=52.0
Q ss_pred cccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcE
Q 016771 258 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 337 (383)
Q Consensus 258 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~ 337 (383)
.+| .-..+++++.|+++ .+..+=-++-+...... .+|..-+..-++||-.......|+-++...+.+. ++ | +
T Consensus 76 ~Rp-~~l~~li~~i~~~~-~l~MADist~ee~~~A~-~~G~D~I~TTLsGYT~~t~~~~pD~~lv~~l~~~-~~--p--v 147 (192)
T PF04131_consen 76 PRP-ETLEELIREIKEKY-QLVMADISTLEEAINAA-ELGFDIIGTTLSGYTPYTKGDGPDFELVRELVQA-DV--P--V 147 (192)
T ss_dssp S-S-S-HHHHHHHHHHCT-SEEEEE-SSHHHHHHHH-HTT-SEEE-TTTTSSTTSTTSSHHHHHHHHHHHT-TS--E--E
T ss_pred CCC-cCHHHHHHHHHHhC-cEEeeecCCHHHHHHHH-HcCCCEEEcccccCCCCCCCCCCCHHHHHHHHhC-CC--c--E
Confidence 355 78899999999987 55554444444443333 3421111123445433332345555666665543 33 3 3
Q ss_pred EEEe--cCHHhHHHHHHcCCcEEEEeC
Q 016771 338 LFVT--DVYQEATAAKAAGLEVVISIR 362 (383)
Q Consensus 338 l~VG--Ds~~Di~aA~~aG~~~i~v~~ 362 (383)
+.=| .++.+...|.++|..+|.|..
T Consensus 148 IaEGri~tpe~a~~al~~GA~aVVVGs 174 (192)
T PF04131_consen 148 IAEGRIHTPEQAAKALELGAHAVVVGS 174 (192)
T ss_dssp EEESS--SHHHHHHHHHTT-SEEEE-H
T ss_pred eecCCCCCHHHHHHHHhcCCeEEEECc
Confidence 3333 566899999999999998753
No 409
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=21.88 E-value=84 Score=25.41 Aligned_cols=31 Identities=10% Similarity=0.119 Sum_probs=25.6
Q ss_pred cCCCHHHHHHHHHhCCCeEEEEcCCcHHHHH
Q 016771 260 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR 290 (383)
Q Consensus 260 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~ 290 (383)
-.+.+.++++.++++|.++..+|+.......
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la 89 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTLA 89 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCchh
Confidence 4478999999999999999999998655443
No 410
>PTZ00174 phosphomannomutase; Provisional
Probab=21.77 E-value=72 Score=29.54 Aligned_cols=38 Identities=16% Similarity=-0.050 Sum_probs=30.1
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEec----CHHhHHHHHHcCCcEEEEe
Q 016771 319 TPSYVEITNSLGVDKPSEILFVTD----VYQEATAAKAAGLEVVISI 361 (383)
Q Consensus 319 p~~~~~~~~~l~v~~p~e~l~VGD----s~~Di~aA~~aG~~~i~v~ 361 (383)
......+++. +++++.||| +.||+..=+.+|..++.|.
T Consensus 190 g~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 190 TYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred HHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 3455555555 479999999 8899999998888777776
No 411
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=21.67 E-value=2.6e+02 Score=25.99 Aligned_cols=41 Identities=27% Similarity=0.192 Sum_probs=29.1
Q ss_pred CCCCHHHHHHHHHHHHH---hCCCCeEEEEcccc-ceeecCCHHHH
Q 016771 36 NTAYENELTDSLAKAID---AYPKATAVLVRNHG-IYVWGDSWINA 77 (383)
Q Consensus 36 n~~~~~~l~~~~~~~~~---~~p~~~a~Li~~HG-~~~wG~~~~~a 77 (383)
|..+.+ +...+.+++. .+|+..+|+|.+.| .++-|-|+.+.
T Consensus 23 Nal~~~-~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~ 67 (249)
T PRK07938 23 NALPSA-GWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKEL 67 (249)
T ss_pred ccCCHH-HHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHH
Confidence 666543 3344444444 46888999999998 88999999764
No 412
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.57 E-value=49 Score=34.17 Aligned_cols=39 Identities=13% Similarity=0.159 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEecCHHhHHHHHHcCCcEEEEe
Q 016771 318 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 361 (383)
Q Consensus 318 ~p~~~~~~~~~l~v~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~ 361 (383)
.-+-|..-|+-+|-. -++++| -.=.+-|++.|+.+|...
T Consensus 488 ~IDt~lmSCRVlgRk-vE~~l~----~~~~e~A~~~gi~tir~~ 526 (574)
T COG3882 488 FIDTFLMSCRVLGRK-VEQRLM----NSLEEQALSEGINTIRGY 526 (574)
T ss_pred EhHHHHHHHHHHHHH-HHHHHH----HHHHHHHHhcCcceeeeE
Confidence 456777888888887 777776 245677889999887543
No 413
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=21.08 E-value=96 Score=29.72 Aligned_cols=30 Identities=23% Similarity=0.317 Sum_probs=25.3
Q ss_pred ccccccCCCHHHHHHHHHhCCCeEEEEcCC
Q 016771 255 ELEGEVFDDVPEALEKWHSLGTKVYIYSSG 284 (383)
Q Consensus 255 ~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~ 284 (383)
......||+.+++++.|+++|+++.+....
T Consensus 67 t~d~~~FPdp~~mi~~Lh~~G~k~v~~v~P 96 (292)
T cd06595 67 SWNRKLFPDPEKLLQDLHDRGLKVTLNLHP 96 (292)
T ss_pred EEChhcCCCHHHHHHHHHHCCCEEEEEeCC
Confidence 344468999999999999999999987754
No 414
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=20.85 E-value=3.3e+02 Score=28.21 Aligned_cols=101 Identities=18% Similarity=0.141 Sum_probs=58.4
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccc-eeeeeccCCCCCCCHHHHHHHHHHc------
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSL------ 329 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~-v~~~~d~~~~~KP~p~~~~~~~~~l------ 329 (383)
.++..|.+.+.+..+....-.+- ++.-.......+.+..++...... +.+ .....++|..+-+...+...
T Consensus 128 ~Cp~Cp~~v~~~~~~a~~~p~i~-~~~id~~~~~~~~~~~~v~~VP~~~i~~--~~~~~g~~~~~~~~~~l~~~~~~~~~ 204 (515)
T TIGR03140 128 TCQNCPDVVQALNQMALLNPNIS-HTMIDGALFQDEVEALGIQGVPAVFLNG--EEFHNGRMDLAELLEKLEETAGVEAA 204 (515)
T ss_pred CCCCCHHHHHHHHHHHHhCCCce-EEEEEchhCHHHHHhcCCcccCEEEECC--cEEEecCCCHHHHHHHHhhccCcccc
Confidence 35777999999999987632222 222233333344566654444332 232 22233444444444433322
Q ss_pred ----CCCCCCcEEEEecCHHhHHHHHHc---CCcEEEEe
Q 016771 330 ----GVDKPSEILFVTDVYQEATAAKAA---GLEVVISI 361 (383)
Q Consensus 330 ----~v~~p~e~l~VGDs~~Di~aA~~a---G~~~i~v~ 361 (383)
... +.+++.||-++.++.||..+ |.+++.+.
T Consensus 205 ~~~~~~~-~~dVvIIGgGpAGl~AA~~la~~G~~v~li~ 242 (515)
T TIGR03140 205 SALEQLD-PYDVLVVGGGPAGAAAAIYAARKGLRTAMVA 242 (515)
T ss_pred hhccccC-CCCEEEECCCHHHHHHHHHHHHCCCcEEEEe
Confidence 233 67899999999999888654 78887775
No 415
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=20.79 E-value=1e+02 Score=22.56 Aligned_cols=15 Identities=20% Similarity=0.239 Sum_probs=13.0
Q ss_pred eEEEecccCCCcccc
Q 016771 142 RCIVLDIEGTTTPIS 156 (383)
Q Consensus 142 kaVlFDlDGTL~d~~ 156 (383)
..|+||=|+.-+|+.
T Consensus 25 s~iiFDNded~tdSa 39 (65)
T PF06117_consen 25 SDIIFDNDEDKTDSA 39 (65)
T ss_pred CCeeecCCCcccchH
Confidence 459999999999975
No 416
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=20.76 E-value=5e+02 Score=25.10 Aligned_cols=97 Identities=11% Similarity=0.017 Sum_probs=53.2
Q ss_pred HHHHHHHHHhC-CC-eEEEEcCCcHHHHHHHHhhcCCCCcccceeeeecc-CCCCCCCHHHHHHHHHHc-CCCCCCcEEE
Q 016771 264 VPEALEKWHSL-GT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-AVGNKRETPSYVEITNSL-GVDKPSEILF 339 (383)
Q Consensus 264 v~e~L~~L~~~-G~-~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~-~~~~KP~p~~~~~~~~~l-~v~~p~e~l~ 339 (383)
...+++.|+++ ++ ...|+|+........+++.+++. .++....-.. ....+--......+.+.+ ..+ |+=++.
T Consensus 16 ~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-pDiv~~ 92 (365)
T TIGR00236 16 MAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLFHLP--PDYDLNIMSPGQTLGEITSNMLEGLEELLLEEK-PDIVLV 92 (365)
T ss_pred HHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhcCCC--CCeeeecCCCCCCHHHHHHHHHHHHHHHHHHcC-CCEEEE
Confidence 34577788775 33 35777887777777777777432 1111110010 111122223333333322 233 767777
Q ss_pred EecCHH---hHHHHHHcCCcEEEEeCC
Q 016771 340 VTDVYQ---EATAAKAAGLEVVISIRP 363 (383)
Q Consensus 340 VGDs~~---Di~aA~~aG~~~i~v~~~ 363 (383)
.||... ...+|+..|++.+.+..+
T Consensus 93 ~gd~~~~la~a~aa~~~~ipv~h~~~g 119 (365)
T TIGR00236 93 QGDTTTTLAGALAAFYLQIPVGHVEAG 119 (365)
T ss_pred eCCchHHHHHHHHHHHhCCCEEEEeCC
Confidence 788653 567788899999887654
No 417
>COG0106 HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
Probab=20.75 E-value=6.8e+02 Score=23.47 Aligned_cols=73 Identities=18% Similarity=0.231 Sum_probs=51.1
Q ss_pred CHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHhhcCCCCcccceeeeeccCCCCCCCHHHHHHHHHHcCCCCCCcEEEEe-
Q 016771 263 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT- 341 (383)
Q Consensus 263 gv~e~L~~L~~~G~~l~IvTn~~~~~~~~~l~~~~~~~l~~~v~~~~d~~~~~KP~p~~~~~~~~~l~v~~p~e~l~VG- 341 (383)
...++++++.+.|..-.|+|+-+++ ....=|+.+.+.++++...++ +++=|
T Consensus 148 ~~~~l~~~~~~~g~~~ii~TdI~~D------------------------Gtl~G~n~~l~~~l~~~~~ip----viaSGG 199 (241)
T COG0106 148 ELEELAKRLEEVGLAHILYTDISRD------------------------GTLSGPNVDLVKELAEAVDIP----VIASGG 199 (241)
T ss_pred CHHHHHHHHHhcCCCeEEEEecccc------------------------cccCCCCHHHHHHHHHHhCcC----EEEecC
Confidence 4556666666666666666653221 122348889999999998765 66666
Q ss_pred -cCHHhHHHHHHc-CCcEEEEeCC
Q 016771 342 -DVYQEATAAKAA-GLEVVISIRP 363 (383)
Q Consensus 342 -Ds~~Di~aA~~a-G~~~i~v~~~ 363 (383)
-|..|++++++. |+..+.+.+-
T Consensus 200 v~s~~Di~~l~~~~G~~GvIvG~A 223 (241)
T COG0106 200 VSSLDDIKALKELSGVEGVIVGRA 223 (241)
T ss_pred cCCHHHHHHHHhcCCCcEEEEehH
Confidence 677999999999 8988887653
No 418
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=20.69 E-value=95 Score=29.82 Aligned_cols=27 Identities=22% Similarity=0.377 Sum_probs=23.8
Q ss_pred ccccCCCHHHHHHHHHhCCCeEEEEcC
Q 016771 257 EGEVFDDVPEALEKWHSLGTKVYIYSS 283 (383)
Q Consensus 257 ~~~~~pgv~e~L~~L~~~G~~l~IvTn 283 (383)
....||+..++++.|+++|+++.+..+
T Consensus 61 d~~~FPd~~~~i~~l~~~G~~~~~~~~ 87 (308)
T cd06593 61 DPDRFPDPEGMLSRLKEKGFKVCLWIN 87 (308)
T ss_pred CcccCCCHHHHHHHHHHCCCeEEEEec
Confidence 346899999999999999999988765
No 419
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=20.67 E-value=1.9e+02 Score=28.45 Aligned_cols=58 Identities=19% Similarity=0.190 Sum_probs=39.1
Q ss_pred eEEEeeecCCCCHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHH
Q 016771 28 ELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLH 95 (383)
Q Consensus 28 ~~~ipv~~n~~~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~~ 95 (383)
+..||||+=... +..+.|.+|.+ ..-.+.|.|||+ +.+-..+..++...+|++-.+.+
T Consensus 24 ~~~iPvIDls~~--~~~~~l~~Ac~---~~GFF~v~nHGI-----~~~li~~~~~~~~~FF~LP~e~K 81 (335)
T PLN02156 24 PVLIPVIDLTDS--DAKTQIVKACE---EFGFFKVINHGV-----RPDLLTQLEQEAIGFFALPHSLK 81 (335)
T ss_pred CCCCCcccCCCh--HHHHHHHHHHH---HCCEEEEECCCC-----CHHHHHHHHHHHHHHHcCCHHHH
Confidence 345999987632 23566777776 445778999999 55555666667777777655443
No 420
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=20.42 E-value=91 Score=30.64 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=25.4
Q ss_pred cccccccCCCH--HHHHHHHHhCCCeEEEEcCC
Q 016771 254 NELEGEVFDDV--PEALEKWHSLGTKVYIYSSG 284 (383)
Q Consensus 254 ~~~~~~~~pgv--~e~L~~L~~~G~~l~IvTn~ 284 (383)
.......||+. .++++.|+++|+++.+..+.
T Consensus 56 f~~d~~~FPdp~~~~mi~~L~~~G~k~~~~i~P 88 (339)
T cd06602 56 FTLDPVRFPGLKMPEFVDELHANGQHYVPILDP 88 (339)
T ss_pred eecccccCCCccHHHHHHHHHHCCCEEEEEEeC
Confidence 33445679999 99999999999999888754
No 421
>PLN02216 protein SRG1
Probab=20.39 E-value=1.1e+02 Score=30.36 Aligned_cols=36 Identities=25% Similarity=0.257 Sum_probs=25.2
Q ss_pred EEeeecCCC----C-HHHHHHHHHHHHHhCCCCeEEEEccccce
Q 016771 30 VVPIIENTA----Y-ENELTDSLAKAIDAYPKATAVLVRNHGIY 68 (383)
Q Consensus 30 ~ipv~~n~~----~-~~~l~~~~~~~~~~~p~~~a~Li~~HG~~ 68 (383)
.||||+=.. + ..+.++.|.+|.+ +.-.+.|.|||+=
T Consensus 52 ~iPvIDls~~~~~~~~~~~~~~l~~Ac~---~~GFF~v~nHGI~ 92 (357)
T PLN02216 52 EIPIIDMKRLCSSTAMDSEVEKLDFACK---EWGFFQLVNHGID 92 (357)
T ss_pred CCCeEEChhccCCccHHHHHHHHHHHHH---HCcEEEEECCCCC
Confidence 599998432 1 2457778888887 3456678999973
No 422
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=20.04 E-value=2.2e+02 Score=28.08 Aligned_cols=58 Identities=21% Similarity=0.154 Sum_probs=33.8
Q ss_pred EEEeeecCCC------CHHHHHHHHHHHHHhCCCCeEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHH
Q 016771 29 LVVPIIENTA------YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL 94 (383)
Q Consensus 29 ~~ipv~~n~~------~~~~l~~~~~~~~~~~p~~~a~Li~~HG~~~wG~~~~~a~~~~e~~e~l~~~~~~~ 94 (383)
..||||+=.+ +..+.+++|.+|.+ ..-.+.|.|||+= .+.-.+..++.+-.|++-.+.
T Consensus 43 ~~IPvIDls~~~~~~~~~~~~~~~l~~A~~---~~GFf~l~nHGI~-----~~l~~~~~~~~~~FF~LP~ee 106 (348)
T PLN00417 43 MDIPAIDLSLLLSSSDDGREELSKLHSALS---TWGVVQVMNHGIT-----EAFLDKIYKLTKQFFALPTEE 106 (348)
T ss_pred CCCCeEEChhhcCCCchHHHHHHHHHHHHH---HCCEEEEEcCCCC-----HHHHHHHHHHHHHHHcCCHHH
Confidence 3599998432 22334567888887 3446678999983 333344444555556644444
Done!