Query 016772
Match_columns 383
No_of_seqs 290 out of 2182
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 03:32:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016772.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016772hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z3y_A Lysine-specific histone 100.0 1.3E-39 4.3E-44 329.7 29.0 275 77-354 355-658 (662)
2 2xag_A Lysine-specific histone 100.0 4E-39 1.4E-43 330.2 26.5 275 78-355 527-830 (852)
3 4gut_A Lysine-specific histone 100.0 5.6E-38 1.9E-42 319.9 34.2 339 14-352 419-775 (776)
4 1rsg_A FMS1 protein; FAD bindi 100.0 6E-36 2.1E-40 295.4 32.1 301 51-356 136-509 (516)
5 1s3e_A Amine oxidase [flavin-c 100.0 3.3E-36 1.1E-40 297.6 27.1 290 53-355 145-455 (520)
6 2yg5_A Putrescine oxidase; oxi 100.0 7.6E-36 2.6E-40 290.1 25.1 287 53-354 145-451 (453)
7 1b37_A Protein (polyamine oxid 100.0 9.1E-34 3.1E-38 276.8 34.8 266 91-356 171-460 (472)
8 2vvm_A Monoamine oxidase N; FA 100.0 9.3E-34 3.2E-38 278.4 24.4 285 53-354 185-485 (495)
9 3k7m_X 6-hydroxy-L-nicotine ox 100.0 2.9E-32 9.9E-37 263.1 24.0 305 24-353 103-425 (431)
10 2iid_A L-amino-acid oxidase; f 100.0 1.3E-32 4.4E-37 270.5 21.1 242 111-355 231-485 (498)
11 2jae_A L-amino acid oxidase; o 100.0 2.5E-30 8.6E-35 253.6 20.8 240 111-355 229-486 (489)
12 3i6d_A Protoporphyrinogen oxid 100.0 1.9E-29 6.7E-34 245.8 22.0 278 51-354 147-468 (470)
13 3lov_A Protoporphyrinogen oxid 100.0 3.4E-28 1.2E-32 237.6 18.7 275 51-354 145-465 (475)
14 2ivd_A PPO, PPOX, protoporphyr 100.0 7.1E-28 2.4E-32 235.5 20.9 280 51-355 146-474 (478)
15 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 1E-26 3.4E-31 217.6 20.5 228 113-353 104-341 (342)
16 3ayj_A Pro-enzyme of L-phenyla 99.9 1.4E-27 4.9E-32 238.7 15.0 260 94-355 318-680 (721)
17 1sez_A Protoporphyrinogen oxid 99.9 6.1E-27 2.1E-31 230.4 18.7 282 51-355 147-494 (504)
18 3nks_A Protoporphyrinogen oxid 99.9 1.1E-25 3.8E-30 219.8 18.6 277 51-353 141-473 (477)
19 3ka7_A Oxidoreductase; structu 99.9 1.3E-22 4.4E-27 195.1 19.1 274 50-351 132-424 (425)
20 4dsg_A UDP-galactopyranose mut 99.9 6.3E-22 2.2E-26 193.2 16.9 278 50-351 133-452 (484)
21 4gde_A UDP-galactopyranose mut 99.9 2.1E-20 7.3E-25 183.9 19.7 277 49-352 138-477 (513)
22 4dgk_A Phytoene dehydrogenase; 99.8 1.7E-20 5.8E-25 184.2 15.0 262 90-355 189-492 (501)
23 1yvv_A Amine oxidase, flavin-c 99.8 6.4E-19 2.2E-23 163.8 20.7 221 113-354 102-327 (336)
24 3nrn_A Uncharacterized protein 99.8 8.1E-19 2.8E-23 168.5 20.7 262 52-350 126-403 (421)
25 2e1m_C L-glutamate oxidase; L- 99.8 2.6E-19 9E-24 150.8 11.0 116 238-355 33-153 (181)
26 2b9w_A Putative aminooxidase; 99.7 2E-17 6.9E-22 158.8 16.9 266 53-351 142-423 (424)
27 2e1m_B L-glutamate oxidase; L- 99.5 8.8E-16 3E-20 120.3 -2.9 107 157-278 4-111 (130)
28 1v0j_A UDP-galactopyranose mut 99.4 1.1E-13 3.8E-18 131.6 7.5 127 51-212 136-275 (399)
29 1i8t_A UDP-galactopyranose mut 99.3 3.1E-12 1.1E-16 120.2 10.2 126 51-212 126-261 (367)
30 2bi7_A UDP-galactopyranose mut 99.3 4E-11 1.4E-15 113.2 13.6 118 51-208 130-260 (384)
31 3hdq_A UDP-galactopyranose mut 99.1 1.1E-09 3.6E-14 103.3 16.5 165 10-213 108-290 (397)
32 2bcg_G Secretory pathway GDP d 98.4 7.9E-06 2.7E-10 78.6 15.8 58 113-171 234-299 (453)
33 3p1w_A Rabgdi protein; GDI RAB 98.1 7.4E-06 2.5E-10 78.7 9.5 60 111-170 246-312 (475)
34 1d5t_A Guanine nucleotide diss 98.1 6.7E-06 2.3E-10 78.6 8.4 60 113-172 226-290 (433)
35 3kkj_A Amine oxidase, flavin-c 97.9 0.00083 2.8E-08 58.7 18.8 219 116-355 105-328 (336)
36 1vg0_A RAB proteins geranylger 97.5 0.0002 6.7E-09 71.1 8.1 86 111-212 368-461 (650)
37 2e1m_A L-glutamate oxidase; L- 97.2 0.00043 1.5E-08 64.4 6.3 59 111-169 310-370 (376)
38 3ihg_A RDME; flavoenzyme, anth 96.7 0.015 5.1E-07 56.8 13.1 42 130-171 134-182 (535)
39 3dje_A Fructosyl amine: oxygen 95.4 0.023 7.8E-07 53.8 6.5 52 121-172 161-221 (438)
40 3i3l_A Alkylhalidase CMLS; fla 95.2 0.31 1.1E-05 48.1 14.3 42 130-171 142-187 (591)
41 3e1t_A Halogenase; flavoprotei 95.1 0.1 3.4E-06 50.6 10.3 42 130-171 125-171 (512)
42 3nyc_A D-arginine dehydrogenas 95.1 0.02 6.9E-07 52.8 5.1 51 121-172 154-209 (381)
43 3fmw_A Oxygenase; mithramycin, 95.1 0.65 2.2E-05 45.6 16.1 41 130-170 162-205 (570)
44 3nix_A Flavoprotein/dehydrogen 94.9 0.44 1.5E-05 44.4 13.9 42 130-171 120-165 (421)
45 3ps9_A TRNA 5-methylaminomethy 94.9 0.035 1.2E-06 55.9 6.4 52 121-172 417-473 (676)
46 3v76_A Flavoprotein; structura 94.6 0.061 2.1E-06 50.7 7.0 54 116-170 127-185 (417)
47 3dme_A Conserved exported prot 94.5 0.05 1.7E-06 49.8 6.1 52 121-172 150-209 (369)
48 3pvc_A TRNA 5-methylaminomethy 94.4 0.043 1.5E-06 55.4 5.7 51 121-171 412-468 (689)
49 3rp8_A Flavoprotein monooxygen 94.0 0.067 2.3E-06 50.0 5.9 41 131-171 140-180 (407)
50 2uzz_A N-methyl-L-tryptophan o 93.8 0.076 2.6E-06 48.8 5.8 42 130-172 163-204 (372)
51 2oln_A NIKD protein; flavoprot 93.7 0.087 3E-06 49.0 6.0 41 130-171 167-207 (397)
52 1y56_B Sarcosine oxidase; dehy 93.7 0.093 3.2E-06 48.4 6.1 41 130-171 163-204 (382)
53 2x3n_A Probable FAD-dependent 93.5 0.075 2.6E-06 49.5 5.3 42 130-171 122-165 (399)
54 2i0z_A NAD(FAD)-utilizing dehy 93.4 0.11 3.7E-06 49.5 6.2 50 120-169 133-188 (447)
55 2ywl_A Thioredoxin reductase r 93.4 0.093 3.2E-06 42.8 5.1 39 130-170 70-108 (180)
56 2v3a_A Rubredoxin reductase; a 93.3 0.13 4.4E-06 47.7 6.5 49 122-170 192-241 (384)
57 3o0h_A Glutathione reductase; 93.3 0.13 4.3E-06 49.5 6.6 41 130-170 246-286 (484)
58 2vou_A 2,6-dihydroxypyridine h 93.2 0.16 5.5E-06 47.3 6.9 52 120-171 98-152 (397)
59 2gf3_A MSOX, monomeric sarcosi 93.2 0.1 3.6E-06 48.2 5.6 51 121-172 150-205 (389)
60 1ryi_A Glycine oxidase; flavop 93.2 0.08 2.7E-06 48.8 4.8 50 121-171 164-218 (382)
61 1xdi_A RV3303C-LPDA; reductase 93.1 0.13 4.6E-06 49.5 6.4 41 130-170 237-277 (499)
62 2xdo_A TETX2 protein; tetracyc 93.1 0.13 4.4E-06 47.9 6.1 52 121-172 128-182 (398)
63 3iwa_A FAD-dependent pyridine 92.9 0.14 5E-06 48.9 6.3 41 130-170 216-256 (472)
64 3nlc_A Uncharacterized protein 92.8 0.15 5.2E-06 49.8 6.2 51 121-171 220-276 (549)
65 3lxd_A FAD-dependent pyridine 92.6 0.19 6.4E-06 47.2 6.5 41 130-170 208-249 (415)
66 3fg2_P Putative rubredoxin red 92.6 0.19 6.6E-06 46.9 6.6 41 130-170 198-239 (404)
67 2yqu_A 2-oxoglutarate dehydrog 92.4 0.2 6.7E-06 47.7 6.5 42 130-171 222-263 (455)
68 2gqf_A Hypothetical protein HI 92.1 0.2 6.8E-06 46.9 6.0 49 120-169 108-165 (401)
69 1m6i_A Programmed cell death p 92.1 0.25 8.6E-06 47.6 6.8 47 124-170 233-280 (493)
70 3ef6_A Toluene 1,2-dioxygenase 91.7 0.26 9E-06 46.1 6.3 41 130-170 199-239 (410)
71 2r9z_A Glutathione amide reduc 91.5 0.29 1E-05 46.6 6.5 41 130-170 221-262 (463)
72 4hb9_A Similarities with proba 91.5 0.35 1.2E-05 44.8 6.9 50 121-170 112-164 (412)
73 1mo9_A ORF3; nucleotide bindin 91.4 0.22 7.7E-06 48.3 5.7 41 130-170 269-314 (523)
74 3oc4_A Oxidoreductase, pyridin 91.1 0.31 1.1E-05 46.3 6.2 46 124-170 196-242 (452)
75 4a9w_A Monooxygenase; baeyer-v 91.1 0.29 9.8E-06 44.3 5.8 41 130-171 90-131 (357)
76 1ges_A Glutathione reductase; 91.0 0.35 1.2E-05 45.9 6.5 41 130-170 222-263 (450)
77 2wpf_A Trypanothione reductase 90.6 0.38 1.3E-05 46.3 6.4 41 130-170 249-290 (495)
78 2hqm_A GR, grase, glutathione 90.6 0.38 1.3E-05 46.1 6.4 41 130-170 240-283 (479)
79 2zbw_A Thioredoxin reductase; 90.6 0.39 1.3E-05 43.2 6.2 41 130-170 79-119 (335)
80 1fec_A Trypanothione reductase 90.5 0.34 1.2E-05 46.6 5.9 41 130-170 245-286 (490)
81 2gag_B Heterotetrameric sarcos 90.4 0.33 1.1E-05 45.0 5.6 41 130-171 188-229 (405)
82 1q1r_A Putidaredoxin reductase 89.7 0.58 2E-05 44.1 6.8 41 130-170 205-248 (431)
83 3gwf_A Cyclohexanone monooxyge 89.6 0.48 1.6E-05 46.2 6.2 39 132-170 105-145 (540)
84 4ap3_A Steroid monooxygenase; 89.6 0.5 1.7E-05 46.1 6.4 39 132-170 117-157 (549)
85 2gv8_A Monooxygenase; FMO, FAD 89.6 0.43 1.5E-05 45.2 5.8 39 132-170 131-175 (447)
86 3ic9_A Dihydrolipoamide dehydr 89.5 0.52 1.8E-05 45.3 6.3 47 124-170 222-272 (492)
87 4dna_A Probable glutathione re 89.5 0.44 1.5E-05 45.3 5.8 40 130-170 225-266 (463)
88 2qa2_A CABE, polyketide oxygen 89.4 0.43 1.5E-05 46.0 5.7 42 130-171 121-165 (499)
89 1w4x_A Phenylacetone monooxyge 89.2 0.45 1.5E-05 46.4 5.7 39 132-170 112-152 (542)
90 2cul_A Glucose-inhibited divis 89.2 0.45 1.5E-05 40.6 5.1 40 130-170 83-123 (232)
91 2cdu_A NADPH oxidase; flavoenz 89.0 0.65 2.2E-05 44.0 6.5 41 130-170 205-245 (452)
92 3axb_A Putative oxidoreductase 88.9 0.41 1.4E-05 45.2 5.1 41 130-171 195-253 (448)
93 2qa1_A PGAE, polyketide oxygen 88.9 0.49 1.7E-05 45.6 5.7 42 130-171 120-164 (500)
94 1onf_A GR, grase, glutathione 88.8 0.65 2.2E-05 44.7 6.5 41 130-170 231-273 (500)
95 3ab1_A Ferredoxin--NADP reduct 88.7 0.69 2.4E-05 42.1 6.3 41 130-170 88-129 (360)
96 2eq6_A Pyruvate dehydrogenase 88.6 0.63 2.2E-05 44.3 6.2 41 130-170 224-269 (464)
97 3s5w_A L-ornithine 5-monooxyge 88.5 0.65 2.2E-05 44.0 6.2 41 130-170 330-375 (463)
98 1pj5_A N,N-dimethylglycine oxi 88.1 0.61 2.1E-05 48.0 6.1 50 122-172 152-207 (830)
99 3d1c_A Flavin-containing putat 88.0 0.62 2.1E-05 42.5 5.5 41 130-171 102-142 (369)
100 3ntd_A FAD-dependent pyridine 88.0 0.79 2.7E-05 44.7 6.6 40 130-169 206-264 (565)
101 2qae_A Lipoamide, dihydrolipoy 87.9 0.73 2.5E-05 43.9 6.1 48 123-170 221-274 (468)
102 3cgv_A Geranylgeranyl reductas 87.4 0.6 2E-05 43.0 5.1 42 130-171 116-161 (397)
103 1ojt_A Surface protein; redox- 87.2 0.54 1.8E-05 45.0 4.8 41 130-170 240-284 (482)
104 1y56_A Hypothetical protein PH 87.2 0.92 3.2E-05 43.5 6.4 53 118-170 258-311 (493)
105 3lad_A Dihydrolipoamide dehydr 87.1 0.77 2.6E-05 43.8 5.8 41 130-170 235-278 (476)
106 3f8d_A Thioredoxin reductase ( 87.0 1 3.5E-05 39.9 6.3 41 130-171 84-124 (323)
107 1qo8_A Flavocytochrome C3 fuma 86.9 0.98 3.4E-05 44.2 6.5 41 130-170 264-310 (566)
108 3lzw_A Ferredoxin--NADP reduct 86.7 0.78 2.7E-05 40.9 5.3 40 130-170 81-121 (332)
109 4at0_A 3-ketosteroid-delta4-5a 86.7 0.8 2.7E-05 44.2 5.7 53 118-170 199-262 (510)
110 3alj_A 2-methyl-3-hydroxypyrid 86.7 0.85 2.9E-05 41.9 5.7 39 130-171 121-159 (379)
111 3c4n_A Uncharacterized protein 86.7 0.28 9.7E-06 45.7 2.4 50 121-171 172-235 (405)
112 2a8x_A Dihydrolipoyl dehydroge 86.5 0.99 3.4E-05 42.8 6.2 41 130-170 226-269 (464)
113 3fpz_A Thiazole biosynthetic e 86.5 0.26 8.8E-06 44.5 1.9 41 315-355 280-325 (326)
114 1k0i_A P-hydroxybenzoate hydro 86.0 1 3.5E-05 41.6 5.9 42 130-171 117-162 (394)
115 1y0p_A Fumarate reductase flav 86.0 1.2 4E-05 43.7 6.5 41 130-170 269-315 (571)
116 1zmd_A Dihydrolipoyl dehydroge 86.0 1 3.5E-05 42.9 5.9 41 130-170 234-280 (474)
117 2e4g_A Tryptophan halogenase; 85.8 1.2 4E-05 43.4 6.4 42 130-172 209-252 (550)
118 3atr_A Conserved archaeal prot 85.8 1.1 3.9E-05 42.3 6.2 43 130-172 114-162 (453)
119 2q0l_A TRXR, thioredoxin reduc 85.6 1.3 4.5E-05 39.1 6.2 40 130-170 73-112 (311)
120 1zk7_A HGII, reductase, mercur 85.5 1.3 4.3E-05 42.2 6.3 41 130-171 230-270 (467)
121 1d4d_A Flavocytochrome C fumar 85.5 1.3 4.4E-05 43.4 6.5 40 130-169 269-314 (572)
122 4b1b_A TRXR, thioredoxin reduc 85.4 1.3 4.4E-05 43.1 6.4 40 130-169 277-316 (542)
123 1trb_A Thioredoxin reductase; 85.4 1.3 4.5E-05 39.3 6.1 41 130-170 198-245 (320)
124 1ebd_A E3BD, dihydrolipoamide 85.4 0.88 3E-05 43.1 5.2 42 130-171 225-269 (455)
125 3uox_A Otemo; baeyer-villiger 85.3 0.9 3.1E-05 44.3 5.3 39 132-170 105-145 (545)
126 2gqw_A Ferredoxin reductase; f 85.2 1.3 4.4E-05 41.3 6.1 43 124-170 194-237 (408)
127 3c96_A Flavin-containing monoo 85.2 0.83 2.8E-05 42.5 4.8 49 122-171 112-168 (410)
128 2zxi_A TRNA uridine 5-carboxym 85.2 1.1 3.7E-05 44.3 5.7 40 130-170 138-178 (637)
129 3klj_A NAD(FAD)-dependent dehy 84.8 0.85 2.9E-05 42.3 4.6 39 130-170 76-114 (385)
130 3fbs_A Oxidoreductase; structu 84.7 1.4 4.8E-05 38.5 5.9 36 135-170 75-110 (297)
131 1dxl_A Dihydrolipoamide dehydr 84.6 1.2 4E-05 42.4 5.6 41 130-170 232-277 (470)
132 3h8l_A NADH oxidase; membrane 84.5 1 3.5E-05 41.9 5.1 37 130-170 232-268 (409)
133 2weu_A Tryptophan 5-halogenase 84.4 1.5 5.2E-05 42.1 6.4 41 130-171 187-229 (511)
134 3vrd_B FCCB subunit, flavocyto 84.4 0.63 2.2E-05 43.2 3.6 40 131-170 217-256 (401)
135 1fl2_A Alkyl hydroperoxide red 84.4 1.3 4.4E-05 39.2 5.5 41 130-170 70-113 (310)
136 2r0c_A REBC; flavin adenine di 84.3 1.1 3.7E-05 43.7 5.4 39 133-171 152-195 (549)
137 3urh_A Dihydrolipoyl dehydroge 84.2 1.2 4.2E-05 42.6 5.6 41 130-170 253-298 (491)
138 2xve_A Flavin-containing monoo 84.1 1.3 4.6E-05 42.0 5.8 41 130-170 115-164 (464)
139 3itj_A Thioredoxin reductase 1 84.0 1.1 3.8E-05 40.0 4.9 51 120-170 211-269 (338)
140 2qcu_A Aerobic glycerol-3-phos 83.8 1.5 5.2E-05 42.1 6.1 43 130-172 163-210 (501)
141 1v59_A Dihydrolipoamide dehydr 83.7 1.2 4E-05 42.5 5.2 41 130-170 238-285 (478)
142 4gcm_A TRXR, thioredoxin reduc 83.5 1.4 4.9E-05 39.0 5.5 43 313-356 265-307 (312)
143 3l8k_A Dihydrolipoyl dehydroge 83.1 1.8 6.1E-05 41.1 6.2 49 122-170 215-270 (466)
144 3dgh_A TRXR-1, thioredoxin red 82.3 1.9 6.5E-05 41.1 6.1 41 130-170 241-287 (483)
145 1rp0_A ARA6, thiazole biosynth 82.2 1.7 5.8E-05 38.2 5.3 49 122-170 124-189 (284)
146 3s5w_A L-ornithine 5-monooxyge 81.6 1.8 6.2E-05 40.9 5.6 49 122-170 131-190 (463)
147 1vdc_A NTR, NADPH dependent th 81.6 1.5 5.1E-05 39.2 4.8 42 315-357 284-325 (333)
148 3ces_A MNMG, tRNA uridine 5-ca 81.5 1.5 5.2E-05 43.4 5.1 41 130-171 139-180 (651)
149 3lzw_A Ferredoxin--NADP reduct 81.0 1.7 5.9E-05 38.6 5.0 50 121-170 193-248 (332)
150 3cp8_A TRNA uridine 5-carboxym 81.0 1.7 5.7E-05 43.1 5.2 48 123-171 123-173 (641)
151 3ics_A Coenzyme A-disulfide re 80.5 2.2 7.4E-05 41.9 5.9 38 130-169 242-279 (588)
152 3fbs_A Oxidoreductase; structu 79.8 1.9 6.4E-05 37.6 4.8 39 315-355 254-292 (297)
153 2q0l_A TRXR, thioredoxin reduc 79.8 2.9 9.9E-05 36.8 6.1 50 121-170 182-239 (311)
154 2cul_A Glucose-inhibited divis 79.8 1.4 4.7E-05 37.4 3.7 35 317-354 197-231 (232)
155 3dk9_A Grase, GR, glutathione 79.7 2.6 8.9E-05 40.1 6.0 41 130-170 242-291 (478)
156 3f8d_A Thioredoxin reductase ( 79.6 2.5 8.7E-05 37.3 5.6 50 121-170 193-249 (323)
157 2pyx_A Tryptophan halogenase; 79.2 2.9 9.9E-05 40.4 6.3 41 130-171 190-232 (526)
158 2vdc_G Glutamate synthase [NAD 79.1 3 0.0001 39.5 6.2 42 314-357 405-446 (456)
159 3r9u_A Thioredoxin reductase; 79.1 2 7E-05 37.8 4.8 42 314-356 272-313 (315)
160 2bc0_A NADH oxidase; flavoprot 78.8 3.1 0.00011 39.8 6.3 46 123-170 242-289 (490)
161 3kd9_A Coenzyme A disulfide re 78.6 2.1 7.1E-05 40.4 4.9 48 122-170 195-242 (449)
162 2zbw_A Thioredoxin reductase; 78.2 4.1 0.00014 36.3 6.6 41 130-170 205-250 (335)
163 3da1_A Glycerol-3-phosphate de 78.1 2 6.9E-05 41.9 4.8 52 121-172 170-232 (561)
164 1hyu_A AHPF, alkyl hydroperoxi 77.9 2.7 9.1E-05 40.6 5.5 43 314-357 476-518 (521)
165 2aqj_A Tryptophan halogenase, 77.9 2.9 9.9E-05 40.5 5.8 42 130-172 179-222 (538)
166 3cty_A Thioredoxin reductase; 77.4 3.8 0.00013 36.3 6.1 50 121-170 194-250 (319)
167 3r9u_A Thioredoxin reductase; 77.3 2.6 9E-05 37.0 5.0 50 121-170 186-242 (315)
168 3d1c_A Flavin-containing putat 77.3 2.2 7.4E-05 38.7 4.5 48 123-170 220-270 (369)
169 1lvl_A Dihydrolipoamide dehydr 76.9 2 7E-05 40.6 4.3 39 130-170 226-266 (458)
170 2rgh_A Alpha-glycerophosphate 76.1 2.7 9.1E-05 41.1 5.0 43 130-172 202-250 (571)
171 2a87_A TRXR, TR, thioredoxin r 76.1 3.5 0.00012 36.9 5.5 42 315-357 277-318 (335)
172 2i0z_A NAD(FAD)-utilizing dehy 76.0 2.4 8.2E-05 40.0 4.5 39 316-354 402-443 (447)
173 1nhp_A NADH peroxidase; oxidor 76.0 3.3 0.00011 38.9 5.5 39 130-170 205-244 (447)
174 2q7v_A Thioredoxin reductase; 75.8 4.5 0.00015 35.9 6.1 50 121-170 191-247 (325)
175 3itj_A Thioredoxin reductase 1 75.8 2.9 9.9E-05 37.2 4.9 40 130-170 98-140 (338)
176 1fl2_A Alkyl hydroperoxide red 75.0 3.2 0.00011 36.5 4.9 41 315-356 266-306 (310)
177 4a5l_A Thioredoxin reductase; 74.7 3.7 0.00013 36.2 5.2 41 314-355 272-312 (314)
178 4fk1_A Putative thioredoxin re 74.3 2.4 8.4E-05 37.4 3.9 42 314-356 260-301 (304)
179 3oz2_A Digeranylgeranylglycero 74.2 3.7 0.00013 37.3 5.3 37 319-355 277-316 (397)
180 2bry_A NEDD9 interacting prote 74.2 2 6.7E-05 41.3 3.4 42 130-171 180-229 (497)
181 2gmh_A Electron transfer flavo 73.9 5.5 0.00019 39.0 6.6 36 319-354 347-385 (584)
182 2wdq_A Succinate dehydrogenase 73.3 4.8 0.00016 39.5 6.0 50 121-170 143-204 (588)
183 1trb_A Thioredoxin reductase; 73.2 4.3 0.00015 35.8 5.3 40 315-355 275-314 (320)
184 4a9w_A Monooxygenase; baeyer-v 73.1 2.4 8.4E-05 38.0 3.7 42 314-356 310-353 (357)
185 2bs2_A Quinol-fumarate reducta 73.1 5.7 0.0002 39.5 6.6 49 122-170 159-218 (660)
186 3ab1_A Ferredoxin--NADP reduct 72.7 4 0.00014 36.9 5.1 41 130-170 216-261 (360)
187 3cgb_A Pyridine nucleotide-dis 72.4 5.4 0.00019 37.9 6.1 39 130-170 241-280 (480)
188 3cty_A Thioredoxin reductase; 72.3 2.9 9.8E-05 37.1 3.9 41 314-355 276-316 (319)
189 2h88_A Succinate dehydrogenase 72.2 5.2 0.00018 39.6 6.0 50 121-170 155-215 (621)
190 2q7v_A Thioredoxin reductase; 71.9 4.3 0.00015 36.0 5.0 42 314-356 272-313 (325)
191 1vdc_A NTR, NADPH dependent th 71.7 4.2 0.00014 36.2 4.9 40 130-171 84-123 (333)
192 4b63_A L-ornithine N5 monooxyg 71.4 4.7 0.00016 38.6 5.4 45 125-169 152-211 (501)
193 3dgz_A Thioredoxin reductase 2 70.7 5.2 0.00018 38.1 5.5 41 130-170 239-285 (488)
194 2dkh_A 3-hydroxybenzoate hydro 70.3 6.2 0.00021 39.1 6.1 40 132-171 159-210 (639)
195 2a87_A TRXR, TR, thioredoxin r 69.8 5.9 0.0002 35.3 5.4 39 130-170 85-124 (335)
196 3cgb_A Pyridine nucleotide-dis 69.1 5.1 0.00017 38.1 5.0 41 130-170 107-150 (480)
197 1kf6_A Fumarate reductase flav 68.2 6 0.0002 38.9 5.4 40 131-170 150-195 (602)
198 4g6h_A Rotenone-insensitive NA 68.1 4.7 0.00016 38.7 4.6 44 124-169 279-329 (502)
199 2ywl_A Thioredoxin reductase r 67.6 6.7 0.00023 31.3 4.8 40 315-355 132-171 (180)
200 4eqs_A Coenzyme A disulfide re 67.0 8.4 0.00029 36.1 6.0 46 121-170 192-238 (437)
201 1q1r_A Putidaredoxin reductase 66.7 4.8 0.00016 37.7 4.2 39 130-170 74-112 (431)
202 3ef6_A Toluene 1,2-dioxygenase 66.3 5.5 0.00019 36.9 4.6 39 130-170 71-109 (410)
203 3h28_A Sulfide-quinone reducta 66.0 4.5 0.00016 37.7 3.9 47 122-170 205-254 (430)
204 2gqw_A Ferredoxin reductase; f 65.9 5.7 0.0002 36.8 4.6 39 130-170 73-111 (408)
205 3nlc_A Uncharacterized protein 65.6 4.9 0.00017 39.1 4.1 41 314-356 503-544 (549)
206 3k30_A Histamine dehydrogenase 65.0 3.6 0.00012 41.2 3.2 46 123-170 573-622 (690)
207 3hyw_A Sulfide-quinone reducta 63.4 10 0.00034 35.4 5.8 48 121-170 203-254 (430)
208 1m6i_A Programmed cell death p 63.1 4.3 0.00015 38.8 3.2 39 130-170 104-142 (493)
209 2bc0_A NADH oxidase; flavoprot 63.1 4.6 0.00016 38.5 3.4 41 130-170 106-147 (490)
210 3ntd_A FAD-dependent pyridine 62.7 6.6 0.00023 38.1 4.5 41 130-170 72-115 (565)
211 1n4w_A CHOD, cholesterol oxida 61.8 8.4 0.00029 36.9 5.0 44 127-170 232-286 (504)
212 1hyu_A AHPF, alkyl hydroperoxi 61.7 9.4 0.00032 36.7 5.4 41 130-170 281-324 (521)
213 1xhc_A NADH oxidase /nitrite r 61.6 6 0.00021 36.1 3.8 36 130-170 197-232 (367)
214 1chu_A Protein (L-aspartate ox 60.3 7.4 0.00025 37.7 4.3 39 316-354 365-410 (540)
215 1coy_A Cholesterol oxidase; ox 60.3 9.1 0.00031 36.7 5.0 46 126-171 236-292 (507)
216 3ics_A Coenzyme A-disulfide re 60.0 9.2 0.00031 37.3 5.0 41 130-170 107-150 (588)
217 1nhp_A NADH peroxidase; oxidor 59.6 9.7 0.00033 35.6 5.0 41 130-170 70-113 (447)
218 1jnr_A Adenylylsulfate reducta 59.5 15 0.0005 36.4 6.4 42 315-356 428-469 (643)
219 3hyw_A Sulfide-quinone reducta 59.5 9 0.00031 35.7 4.7 37 131-170 71-107 (430)
220 3iwa_A FAD-dependent pyridine 59.1 9.9 0.00034 35.9 5.0 41 130-170 80-123 (472)
221 1ps9_A 2,4-dienoyl-COA reducta 58.3 11 0.00039 37.4 5.4 45 124-171 580-627 (671)
222 2e5v_A L-aspartate oxidase; ar 58.1 5.9 0.0002 37.6 3.1 48 122-171 124-175 (472)
223 1kdg_A CDH, cellobiose dehydro 57.6 12 0.0004 36.2 5.3 48 123-170 201-259 (546)
224 3h8l_A NADH oxidase; membrane 57.2 10 0.00034 35.0 4.5 38 317-354 298-335 (409)
225 2gqf_A Hypothetical protein HI 56.9 9.3 0.00032 35.4 4.2 36 316-351 361-399 (401)
226 1xhc_A NADH oxidase /nitrite r 56.8 7.5 0.00026 35.4 3.5 38 130-170 74-111 (367)
227 3oc4_A Oxidoreductase, pyridin 56.6 6.1 0.00021 37.1 3.0 41 130-170 72-113 (452)
228 2gjc_A Thiazole biosynthetic e 56.0 8.1 0.00028 34.7 3.5 39 317-355 282-325 (326)
229 3lxd_A FAD-dependent pyridine 54.4 8.6 0.00029 35.6 3.6 39 130-170 79-117 (415)
230 2cdu_A NADPH oxidase; flavoenz 52.7 11 0.00039 35.2 4.2 41 130-170 72-115 (452)
231 4fk1_A Putative thioredoxin re 52.5 15 0.00052 32.1 4.8 38 133-170 77-115 (304)
232 3h28_A Sulfide-quinone reducta 52.3 15 0.00052 34.1 4.9 43 314-356 281-334 (430)
233 3vrd_B FCCB subunit, flavocyto 52.1 19 0.00064 32.9 5.5 42 316-357 284-326 (401)
234 3sx6_A Sulfide-quinone reducta 51.2 15 0.0005 34.3 4.7 45 123-169 214-266 (437)
235 4a5l_A Thioredoxin reductase; 49.2 30 0.001 30.0 6.2 37 134-170 83-119 (314)
236 3v76_A Flavoprotein; structura 47.6 11 0.00037 35.1 3.1 34 316-349 380-416 (417)
237 3kd9_A Coenzyme A disulfide re 47.4 19 0.00064 33.7 4.7 39 130-170 73-112 (449)
238 1gte_A Dihydropyrimidine dehyd 47.0 28 0.00096 36.6 6.4 42 314-357 469-510 (1025)
239 3ic9_A Dihydrolipoamide dehydr 46.5 17 0.00059 34.5 4.4 38 313-352 300-337 (492)
240 1jnr_A Adenylylsulfate reducta 46.5 25 0.00087 34.7 5.7 49 122-170 156-216 (643)
241 3gyx_A Adenylylsulfate reducta 46.4 23 0.0008 35.1 5.4 44 314-357 448-491 (662)
242 3jsk_A Cypbp37 protein; octame 45.6 25 0.00087 31.7 5.1 23 335-357 315-337 (344)
243 3sx6_A Sulfide-quinone reducta 45.5 18 0.0006 33.7 4.2 43 314-356 292-345 (437)
244 4dna_A Probable glutathione re 45.3 17 0.00059 34.1 4.2 37 314-352 294-330 (463)
245 3qfa_A Thioredoxin reductase 1 45.1 29 0.00099 33.2 5.8 41 130-170 264-313 (519)
246 1y0p_A Fumarate reductase flav 44.9 10 0.00035 36.9 2.5 38 316-353 524-567 (571)
247 1qo8_A Flavocytochrome C3 fuma 44.9 16 0.00054 35.5 3.9 38 316-353 519-562 (566)
248 3l8k_A Dihydrolipoyl dehydroge 44.7 18 0.00063 34.0 4.2 37 314-352 296-332 (466)
249 3fg2_P Putative rubredoxin red 44.6 18 0.0006 33.3 4.0 38 130-170 71-108 (404)
250 3dk9_A Grase, GR, glutathione 44.0 19 0.00064 34.0 4.2 37 314-352 319-355 (478)
251 3jsk_A Cypbp37 protein; octame 43.9 22 0.00076 32.1 4.4 36 318-353 293-337 (344)
252 1chu_A Protein (L-aspartate ox 43.4 21 0.00072 34.4 4.5 48 123-170 144-206 (540)
253 1d4d_A Flavocytochrome C fumar 43.4 12 0.00042 36.3 2.9 37 316-352 525-567 (572)
254 3uox_A Otemo; baeyer-villiger 43.3 17 0.00058 35.1 3.8 44 124-172 345-391 (545)
255 2jbv_A Choline oxidase; alcoho 43.0 20 0.00067 34.7 4.2 41 130-170 223-271 (546)
256 3atr_A Conserved archaeal prot 42.9 28 0.00097 32.4 5.3 37 319-355 282-321 (453)
257 3o0h_A Glutathione reductase; 42.5 21 0.00071 33.8 4.2 38 314-353 314-351 (484)
258 3lad_A Dihydrolipoamide dehydr 42.4 21 0.00073 33.6 4.3 37 314-352 306-342 (476)
259 2a8x_A Dihydrolipoyl dehydroge 42.0 22 0.00075 33.4 4.3 37 314-352 297-333 (464)
260 3gwf_A Cyclohexanone monooxyge 41.6 15 0.00051 35.5 3.1 38 131-172 345-384 (540)
261 3urh_A Dihydrolipoyl dehydroge 41.5 19 0.00063 34.2 3.7 37 314-352 326-362 (491)
262 1v59_A Dihydrolipoamide dehydr 41.1 24 0.00083 33.2 4.5 37 314-352 313-349 (478)
263 1ges_A Glutathione reductase; 40.2 24 0.00081 33.0 4.2 36 315-352 292-327 (450)
264 2hqm_A GR, grase, glutathione 40.2 24 0.00081 33.4 4.2 37 314-352 310-346 (479)
265 3dgh_A TRXR-1, thioredoxin red 40.0 24 0.00082 33.3 4.3 38 314-352 314-351 (483)
266 4eqs_A Coenzyme A disulfide re 39.9 30 0.001 32.2 4.9 41 130-170 71-114 (437)
267 2gjc_A Thiazole biosynthetic e 39.9 43 0.0015 29.9 5.6 51 121-171 150-238 (326)
268 4at0_A 3-ketosteroid-delta4-5a 39.6 18 0.00061 34.6 3.3 36 316-351 466-507 (510)
269 3dgz_A Thioredoxin reductase 2 39.4 26 0.00088 33.1 4.4 38 314-352 314-351 (488)
270 2x8g_A Thioredoxin glutathione 39.2 49 0.0017 32.1 6.5 41 130-170 340-393 (598)
271 1pn0_A Phenol 2-monooxygenase; 39.1 38 0.0013 33.6 5.7 36 319-354 351-389 (665)
272 3pl8_A Pyranose 2-oxidase; sub 39.0 21 0.00073 35.1 3.8 41 130-170 274-322 (623)
273 1zmd_A Dihydrolipoyl dehydroge 38.9 22 0.00074 33.5 3.7 37 314-352 308-344 (474)
274 3qfa_A Thioredoxin reductase 1 38.5 26 0.0009 33.5 4.3 38 314-352 342-379 (519)
275 1y56_A Hypothetical protein PH 38.1 14 0.00049 35.1 2.4 49 122-170 162-217 (493)
276 1dxl_A Dihydrolipoamide dehydr 38.0 22 0.00076 33.3 3.7 37 314-352 305-341 (470)
277 1ebd_A E3BD, dihydrolipoamide 37.5 24 0.00081 33.0 3.7 37 314-352 296-332 (455)
278 2wpf_A Trypanothione reductase 37.1 28 0.00094 33.1 4.2 36 314-351 318-353 (495)
279 3klj_A NAD(FAD)-dependent dehy 37.1 19 0.00066 32.9 3.0 39 314-352 253-293 (385)
280 1fec_A Trypanothione reductase 36.8 28 0.00096 33.0 4.2 37 314-352 314-350 (490)
281 2qae_A Lipoamide, dihydrolipoy 35.9 26 0.0009 32.8 3.8 38 314-352 302-339 (468)
282 2gmh_A Electron transfer flavo 35.8 35 0.0012 33.2 4.8 42 130-171 158-216 (584)
283 2r9z_A Glutathione amide reduc 35.7 31 0.0011 32.4 4.2 36 315-352 291-326 (463)
284 1ojt_A Surface protein; redox- 35.6 26 0.00091 33.0 3.8 37 314-352 312-348 (482)
285 2x8g_A Thioredoxin glutathione 35.2 34 0.0012 33.3 4.6 38 314-352 421-458 (598)
286 1zk7_A HGII, reductase, mercur 34.9 27 0.00092 32.8 3.7 36 314-351 297-332 (467)
287 2eq6_A Pyruvate dehydrogenase 34.8 27 0.00094 32.7 3.7 36 314-351 297-332 (464)
288 1xdi_A RV3303C-LPDA; reductase 34.3 28 0.00095 33.0 3.7 36 314-351 305-340 (499)
289 1mo9_A ORF3; nucleotide bindin 33.9 29 0.00099 33.2 3.8 36 315-352 342-377 (523)
290 2yqu_A 2-oxoglutarate dehydrog 33.2 39 0.0013 31.5 4.5 37 314-352 290-326 (455)
291 3oz2_A Digeranylgeranylglycero 32.7 49 0.0017 29.6 5.0 41 130-170 116-160 (397)
292 1o94_A Tmadh, trimethylamine d 31.7 30 0.001 34.8 3.5 46 123-170 577-644 (729)
293 3gyx_A Adenylylsulfate reducta 31.6 51 0.0017 32.7 5.2 50 121-170 170-231 (662)
294 3cp8_A TRNA uridine 5-carboxym 31.3 34 0.0012 33.8 3.8 35 317-354 377-411 (641)
295 1kf6_A Fumarate reductase flav 31.2 45 0.0016 32.6 4.7 40 315-354 369-415 (602)
296 1lvl_A Dihydrolipoamide dehydr 31.2 34 0.0012 32.0 3.7 36 314-351 293-328 (458)
297 2v3a_A Rubredoxin reductase; a 31.1 31 0.0011 31.3 3.3 38 130-170 74-111 (384)
298 4hb9_A Similarities with proba 29.4 52 0.0018 29.6 4.6 35 319-353 311-348 (412)
299 1cjc_A Protein (adrenodoxin re 29.0 40 0.0014 31.6 3.8 38 318-356 359-396 (460)
300 2x3n_A Probable FAD-dependent 28.6 54 0.0019 29.7 4.6 35 319-353 286-323 (399)
301 1lqt_A FPRA; NADP+ derivative, 28.2 43 0.0015 31.4 3.8 40 317-357 350-389 (456)
302 3cgv_A Geranylgeranyl reductas 28.1 71 0.0024 28.6 5.3 36 319-354 277-315 (397)
303 1ju2_A HydroxynitrIle lyase; f 28.0 47 0.0016 31.9 4.1 41 130-170 208-259 (536)
304 2bs2_A Quinol-fumarate reducta 27.2 58 0.002 32.3 4.7 39 316-354 383-428 (660)
305 2gag_A Heterotetrameric sarcos 26.7 58 0.002 33.9 4.7 41 129-169 329-380 (965)
306 4g6h_A Rotenone-insensitive NA 26.7 58 0.002 31.0 4.4 36 318-353 364-399 (502)
307 4ap3_A Steroid monooxygenase; 26.6 49 0.0017 31.9 3.9 32 136-172 365-396 (549)
308 2gv8_A Monooxygenase; FMO, FAD 26.4 36 0.0012 31.6 2.9 36 133-170 254-290 (447)
309 2wdq_A Succinate dehydrogenase 25.2 36 0.0012 33.2 2.7 40 317-356 379-425 (588)
310 3c96_A Flavin-containing monoo 25.0 60 0.0021 29.6 4.2 34 319-352 303-339 (410)
311 1rp0_A ARA6, thiazole biosynth 24.3 41 0.0014 29.1 2.7 38 318-355 233-275 (284)
312 2qa1_A PGAE, polyketide oxygen 23.7 87 0.003 29.6 5.1 36 319-354 277-315 (500)
313 3q9t_A Choline dehydrogenase a 23.5 67 0.0023 31.2 4.3 37 317-353 534-572 (577)
314 2qa2_A CABE, polyketide oxygen 23.5 83 0.0028 29.8 4.9 36 319-354 278-316 (499)
315 3ces_A MNMG, tRNA uridine 5-ca 23.4 71 0.0024 31.6 4.4 33 318-353 384-416 (651)
316 1k0i_A P-hydroxybenzoate hydro 23.3 87 0.003 28.1 4.9 36 319-354 279-317 (394)
317 3c4a_A Probable tryptophan hyd 23.3 70 0.0024 28.8 4.2 34 319-352 262-298 (381)
318 2h88_A Succinate dehydrogenase 22.8 42 0.0014 33.0 2.7 39 315-353 386-431 (621)
319 1qey_A MNT-C, protein (regulat 22.6 43 0.0015 18.1 1.4 25 252-276 4-28 (31)
320 3f7w_A Putative fructosamine-3 22.4 70 0.0024 27.4 3.9 36 119-158 1-41 (288)
321 3qvp_A Glucose oxidase; oxidor 22.3 67 0.0023 31.3 4.0 38 317-354 540-579 (583)
322 3rp8_A Flavoprotein monooxygen 22.3 67 0.0023 29.2 3.9 33 319-351 301-336 (407)
323 3t37_A Probable dehydrogenase; 21.8 69 0.0023 30.3 4.0 39 130-168 225-267 (526)
324 1lqt_A FPRA; NADP+ derivative, 21.4 77 0.0026 29.6 4.1 42 129-170 265-324 (456)
325 2r0c_A REBC; flavin adenine di 20.9 88 0.003 30.0 4.6 36 319-354 309-347 (549)
326 1gte_A Dihydropyrimidine dehyd 20.7 1.4E+02 0.0048 31.2 6.3 41 129-169 383-439 (1025)
327 1cjc_A Protein (adrenodoxin re 20.4 64 0.0022 30.2 3.4 42 129-170 270-331 (460)
328 1onf_A GR, grase, glutathione 20.4 75 0.0026 30.0 3.9 39 314-352 300-370 (500)
329 3k30_A Histamine dehydrogenase 20.1 65 0.0022 32.0 3.5 35 316-353 639-673 (690)
No 1
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=1.3e-39 Score=329.67 Aligned_cols=275 Identities=35% Similarity=0.591 Sum_probs=231.7
Q ss_pred HHHHHHHHHhhhhhcCCCCCccChhccccc--cccCCCceeccCChHHHHHHHHccCCcccCceeEEEEecCCeeEEEEC
Q 016772 77 HKVLQWYLCRMEGWFAADAETISLKSWDKE--ELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVE 154 (383)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~S~~~~~~~--~~~~g~~~~~~gG~~~l~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~ 154 (383)
+.+++|++..++...+.+.+.+|+..+.++ ..+.+.++.++|||++|+++|+++++|++|++|++|.+++++|.|++.
T Consensus 355 ~~~l~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~l~~~La~~l~I~l~~~V~~I~~~~~~v~V~~~ 434 (662)
T 2z3y_A 355 RQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAV 434 (662)
T ss_dssp HHHHHHHHHHHHHHTTSCGGGBBTTTTTTTGGGCCBSCCEEETTCTTHHHHHHTTTCEEETTEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCChhhcCHhhcCCCcccccCCceeeecCcHHHHHHHHHhcCceecCCeEEEEEECCCcEEEEEe
Confidence 356666655444455778888998876543 235577889999999999999999999999999999999999999876
Q ss_pred C------CcEEEcCEEEEecChHHHhc--CCcccCCCCcHHHHHHHhhcCCcccceEEEEcCCCCCCC-CCcceeecCCC
Q 016772 155 G------GKTFVADAVVVAVPLGVLKA--RTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTS 225 (383)
Q Consensus 155 ~------G~~~~ad~VI~t~p~~~l~~--~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~-~~~~g~~~~~~ 225 (383)
+ |++++||+||+|+|+++|+. ..+.|.|+||+.+.+++++++|+++.||+|.|+++||++ .+.+|.+.+..
T Consensus 435 ~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~ 514 (662)
T 2z3y_A 435 NTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTT 514 (662)
T ss_dssp ESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSS
T ss_pred ecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCC
Confidence 5 56899999999999999987 347899999999999999999999999999999999974 46777764432
Q ss_pred C---ceeEeeeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhCCC--CCCCcEEEEccCCCCCCCCCcCC
Q 016772 226 Y---GCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSYS 300 (383)
Q Consensus 226 ~---~~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~~~~--~~~~~~~~~~~W~~~~~~~g~y~ 300 (383)
. ....+++.. +.++|++|+.|+.+..+..++++++++.++++|+++||. .++|..+.+++|.++||++|+|+
T Consensus 515 ~~~~~~~~~~~~~---~~~vL~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys 591 (662)
T 2z3y_A 515 ASRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYS 591 (662)
T ss_dssp TTTTEEEEEECCS---SSSEEEEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCE
T ss_pred CCCCceeEEEeCC---CCCEEEEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccc
Confidence 1 122333322 456899999999999999999999999999999999986 46789999999999999999999
Q ss_pred CCCCCCChHHHHHHhCCC-------------CCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHH
Q 016772 301 YDTVGKSHDLYERLRIPV-------------DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 301 ~~~~g~~~~~~~~~~~p~-------------~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
+.++|.....++.+.+|+ ++||||||+|+..+.|+||||++||++||++|++.+
T Consensus 592 ~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~ 658 (662)
T 2z3y_A 592 YVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF 658 (662)
T ss_dssp ECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHc
Confidence 999998777777777775 689999999999888999999999999999998765
No 2
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=4e-39 Score=330.21 Aligned_cols=275 Identities=36% Similarity=0.593 Sum_probs=230.1
Q ss_pred HHHHHHHHhhhhhcCCCCCccChhccccc--cccCCCceeccCChHHHHHHHHccCCcccCceeEEEEecCCeeEEEECC
Q 016772 78 KVLQWYLCRMEGWFAADAETISLKSWDKE--ELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEG 155 (383)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~S~~~~~~~--~~~~g~~~~~~gG~~~l~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~~ 155 (383)
++++|++..++...+.+++.+|+..+.++ ..+.+.++.++|||++|+++|+++++|+||++|++|.+.+++|.|++.+
T Consensus 527 ~~l~~~~~~~e~~~~~~l~~lSl~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~~l~I~Lnt~V~~I~~~~~gV~V~~~~ 606 (852)
T 2xag_A 527 QILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVN 606 (852)
T ss_dssp HHHHHHHHHHHHHHTSCTTTBBTTTTTGGGGGCCBSCCEEETTCTTHHHHHHTTTCCEECSEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHhhhcccccCChHhhhhhhhhhccccccCCceEEecCcHHHHHHHHHhCCCEEeCCeEEEEEEcCCcEEEEEee
Confidence 44555544444445778888888876543 2346678899999999999999999999999999999999999988765
Q ss_pred ------CcEEEcCEEEEecChHHHhc--CCcccCCCCcHHHHHHHhhcCCcccceEEEEcCCCCCCC-CCcceeecCCC-
Q 016772 156 ------GKTFVADAVVVAVPLGVLKA--RTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTS- 225 (383)
Q Consensus 156 ------G~~~~ad~VI~t~p~~~l~~--~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~-~~~~g~~~~~~- 225 (383)
|++++||+||+|+|+++|+. ..+.|.|+||..+.++|++++|+++.||+|.|+++||++ .+.+|.+.+..
T Consensus 607 ~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~ 686 (852)
T 2xag_A 607 TRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTA 686 (852)
T ss_dssp SSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSST
T ss_pred cccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccC
Confidence 56899999999999999987 347899999999999999999999999999999999974 46777764421
Q ss_pred --CceeEeeeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhCCC--CCCCcEEEEccCCCCCCCCCcCCC
Q 016772 226 --YGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSYSY 301 (383)
Q Consensus 226 --~~~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~~~~--~~~~~~~~~~~W~~~~~~~g~y~~ 301 (383)
.....+++.. +.++|++|+.|+.+..+..++++++++.++++|+++||. .+.|..+.+++|.++||++|+|++
T Consensus 687 ~~~~l~~~~~~~---~~pvLl~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~ 763 (852)
T 2xag_A 687 SRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSY 763 (852)
T ss_dssp TTTTTCEEEECS---SSSEEEEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEE
T ss_pred CCCceEEEecCC---CCCEEEEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccc
Confidence 1122333332 456888999999888999999999999999999999986 457899999999999999999999
Q ss_pred CCCCCChHHHHHHhCCC-------------CCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 302 DTVGKSHDLYERLRIPV-------------DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 302 ~~~g~~~~~~~~~~~p~-------------~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
..+|.....++.+++|+ ++|||||++|+..|.|+||||++||++||++|++.+.
T Consensus 764 ~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~ 830 (852)
T 2xag_A 764 VAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 830 (852)
T ss_dssp CBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcchhhHHHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhh
Confidence 99998766677777765 5899999999998889999999999999999998864
No 3
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=5.6e-38 Score=319.94 Aligned_cols=339 Identities=28% Similarity=0.501 Sum_probs=262.1
Q ss_pred eeEEcCCCCccCHHHHHHHHHHHHHHHHHHHHHHhh--CCCCCcHHHHHHHHHccC---chhhhhhHHHHHHHHHHHhhh
Q 016772 14 YALFDMDGNQVPQELVTKVGEAFESILKETDKVREE--HDEDMSIQRAISIVFDRR---PELRLEGLAHKVLQWYLCRME 88 (383)
Q Consensus 14 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~s~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 88 (383)
..++...|..............+..+++........ ...+.++.+++.+.+.+. .........+..+.+....+.
T Consensus 419 ~~l~~~~g~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~d~sl~~~~~~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~ 498 (776)
T 4gut_A 419 CDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLE 498 (776)
T ss_dssp CCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHGGGCCGGGCCBHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHH
T ss_pred cceEccCCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHHHH
Confidence 345667777777766665555555555544443321 234678877765433110 001111123334444333345
Q ss_pred hhcCCCCCccChhcccc---ccccCCCceeccCChHHHHHHHHccCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEE
Q 016772 89 GWFAADAETISLKSWDK---EELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVV 165 (383)
Q Consensus 89 ~~~~~~~~~~S~~~~~~---~~~~~g~~~~~~gG~~~l~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI 165 (383)
...|..+..+|+..+.. +..+.+....+.+|++.|+++|+++++|++|++|++|.+++++|.|++.+|++++||+||
T Consensus 499 ~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~~~G~~~l~~aLa~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VI 578 (776)
T 4gut_A 499 YACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVL 578 (776)
T ss_dssp HHHTSCTTSBBTTTTTGGGGSCCCCSCEEECTTCTHHHHHHHHTTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEE
T ss_pred HhcCCChHHcChhhhhhhhhHHhcCCCeEEECChHHHHHHHHHhCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEE
Confidence 55688899999877653 223556677899999999999999999999999999999999999999999889999999
Q ss_pred EecChHHHhcCCcccCCCCcHHHHHHHhhcCCcccceEEEEcCCCCCCC----CCcceeecCCCC---ceeEeeeccCCC
Q 016772 166 VAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN----VEFLGVVSDTSY---GCSYFLNLHKAT 238 (383)
Q Consensus 166 ~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~----~~~~g~~~~~~~---~~~~~~~~~~~~ 238 (383)
+|+|+++|+...+.|.|+||+.+.++++++.|+++.||++.|+++||++ .+++|.+.+... ....+.+..+..
T Consensus 579 vA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g 658 (776)
T 4gut_A 579 VTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQK 658 (776)
T ss_dssp ECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESCTTS
T ss_pred ECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCCCCC
Confidence 9999999987778899999999999999999999999999999999953 245666644221 122233333333
Q ss_pred CCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhCCC--CCCCcEEEEccCCCCCCCCCcCCCCCCCCChHHHHHHhC
Q 016772 239 GHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRI 316 (383)
Q Consensus 239 g~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~~~~--~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~~~~ 316 (383)
+..+|++|+.|+.+..+..++++++++.++++|+++||. .+.|..+.+++|.++||++|+|++..+|.....++.+.+
T Consensus 659 ~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~ 738 (776)
T 4gut_A 659 KHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAE 738 (776)
T ss_dssp CSCEEEEEECTHHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHC
T ss_pred CceEEEEEecchhHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhC
Confidence 456899999998888999999999999999999999985 567899999999999999999998888877667788888
Q ss_pred CC-CCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 317 PV-DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 317 p~-~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
|+ ++||||||+|+..++|+||||++||+|||++|++
T Consensus 739 p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 739 DIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp CBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred cCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 86 8999999999998899999999999999999874
No 4
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=6e-36 Score=295.37 Aligned_cols=301 Identities=26% Similarity=0.371 Sum_probs=220.6
Q ss_pred CCCCcHHHHHHHHHccC-chhhhhhHHHHHHHHHHHhhhhhcCCCCCccChhccccccccCCCceeccCChHHHHHHHHc
Q 016772 51 DEDMSIQRAISIVFDRR-PELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEELLPGGHGLMVRGYLPVINTLAK 129 (383)
Q Consensus 51 ~~d~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~~g~~~~~~gG~~~l~~~L~~ 129 (383)
..|+|+.+++.+++.+. ..+. ......+..++..+..++|.+++++|+.++... ..+...++.| +++|+++|++
T Consensus 136 ~~d~s~~~~l~~~l~~~~~~l~--~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~--~~~~~~~~~g-~~~l~~~l~~ 210 (516)
T 1rsg_A 136 VSDCSFFQLVMKYLLQRRQFLT--NDQIRYLPQLCRYLELWHGLDWKLLSAKDTYFG--HQGRNAFALN-YDSVVQRIAQ 210 (516)
T ss_dssp --CCBHHHHHHHHHHHHGGGSC--HHHHHHHHHHHGGGHHHHTBCTTTSBHHHHCCC--CSSCCEEESC-HHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHhhcccC--HHHHHHHHHHHHHHHHHhCCChHHCChHHHHhh--ccCcchhhhC-HHHHHHHHHH
Confidence 35789999988765331 1110 111122222333334456888899998775432 3344556677 9999999999
Q ss_pred cCC---cccCceeEEEEec-CCeeEEEECCCcEEEcCEEEEecChHHHhcC---------CcccCCCCcHHHHHHHhhcC
Q 016772 130 GLD---IRLGHRVTKITRH-YIGVKVTVEGGKTFVADAVVVAVPLGVLKAR---------TIKFEPRLPDWKEAAIDDLG 196 (383)
Q Consensus 130 ~l~---I~l~~~V~~I~~~-~~~v~V~~~~G~~~~ad~VI~t~p~~~l~~~---------~i~f~p~Lp~~~~~ai~~~~ 196 (383)
.+. |++|++|++|.++ +++|.|++.+|++++||+||+|+|+++|+.. .+.|.|+||+.+.+++++++
T Consensus 211 ~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~ 290 (516)
T 1rsg_A 211 SFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIH 290 (516)
T ss_dssp TSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSC
T ss_pred hCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCC
Confidence 874 9999999999986 5679999999988999999999999999753 47899999999999999999
Q ss_pred CcccceEEEEcCCCCCCCC-CcceeecCCC-------------------------------Cc---eeEeeeccCCCCCc
Q 016772 197 VGIENKIIMHFDKVFWPNV-EFLGVVSDTS-------------------------------YG---CSYFLNLHKATGHC 241 (383)
Q Consensus 197 ~~~~~kv~l~~~~~~w~~~-~~~g~~~~~~-------------------------------~~---~~~~~~~~~~~g~~ 241 (383)
|+++.||++.|+++||++. ..+..+.... .. ...+.+.....+.+
T Consensus 291 ~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (516)
T 1rsg_A 291 FGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKSTGVA 370 (516)
T ss_dssp CCCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHHTSCS
T ss_pred CCcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEeeecCCCc
Confidence 9999999999999999753 3232222110 00 01122223344667
Q ss_pred eEEEEecchhhHHHhcC--CHHHHHHH---HHHHHHHhCC------CCC---------CCc--EEEEccCCCCCCCCCcC
Q 016772 242 VLVYMPAGQLARDIEKM--SDEAAANF---AFTQLKKILP------DAS---------SPI--QYLVSHWGTDANSLGSY 299 (383)
Q Consensus 242 ~l~~~~~g~~a~~~~~~--~~ee~~~~---v~~~L~~~~~------~~~---------~~~--~~~~~~W~~~~~~~g~y 299 (383)
+|++|+.|+.+..++.+ +++++.+. ++++|.++|| +.. .|+ .+..++|.+|||++|+|
T Consensus 371 ~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~Gsy 450 (516)
T 1rsg_A 371 SFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAY 450 (516)
T ss_dssp EEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTTCC
T ss_pred EEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCccC
Confidence 89999999999889888 88888654 6666666665 222 154 78889999999999999
Q ss_pred CCCCCCCCh-HHHHHHh-CCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 300 SYDTVGKSH-DLYERLR-IPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 300 ~~~~~g~~~-~~~~~~~-~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
++..+|... ...+.+. .|.++||||||+|+..+.||||||++||+|||++|++.+..
T Consensus 451 s~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~ 509 (516)
T 1rsg_A 451 SACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKL 509 (516)
T ss_dssp CCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHG
T ss_pred CCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhh
Confidence 998888643 3455565 46789999999999988899999999999999999988753
No 5
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=3.3e-36 Score=297.62 Aligned_cols=290 Identities=20% Similarity=0.266 Sum_probs=230.4
Q ss_pred CCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhccccccc------------cCCCceeccCC
Q 016772 53 DMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKEEL------------LPGGHGLMVRG 119 (383)
Q Consensus 53 d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~~~~~------------~~g~~~~~~gG 119 (383)
++|+.+++.+.+.. . .++.++.+ +.+.++.+++++|+..+..... ..+...++.||
T Consensus 145 ~~s~~~~l~~~~~~-------~----~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG 213 (520)
T 1s3e_A 145 NMTMKELLDKLCWT-------E----SAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGG 213 (520)
T ss_dssp TSBHHHHHHHHCSS-------H----HHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTC
T ss_pred ccCHHHHHHhhCCC-------H----HHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCC
Confidence 67999998764411 1 22233333 5567899999999987542110 12335789999
Q ss_pred hHHHHHHHHc--cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhcCC
Q 016772 120 YLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGV 197 (383)
Q Consensus 120 ~~~l~~~L~~--~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~ 197 (383)
+++|+++|++ +.+|++|++|++|..++++|.|++.+|+++.||+||+|+|+.+++ .+.|.|+||+.+.+++++++|
T Consensus 214 ~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~--~l~~~p~lp~~~~~~i~~~~~ 291 (520)
T 1s3e_A 214 SGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGM--KIHFNPPLPMMRNQMITRVPL 291 (520)
T ss_dssp THHHHHHHHHHHGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGG--GSEEESCCCHHHHHHTTSCCB
T ss_pred HHHHHHHHHHHcCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHc--ceeeCCCCCHHHHHHHHhCCC
Confidence 9999999998 457999999999999888999999999899999999999999987 456889999999999999999
Q ss_pred cccceEEEEcCCCCCCCCCcceeec--CC-CCceeEeeeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHh
Q 016772 198 GIENKIIMHFDKVFWPNVEFLGVVS--DT-SYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKI 274 (383)
Q Consensus 198 ~~~~kv~l~~~~~~w~~~~~~g~~~--~~-~~~~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~ 274 (383)
+++.|+++.|+++||++.++.|.+. +. ......+++...+.+.++|++|+.+..+..|.+++++++++.++++|+++
T Consensus 292 ~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~ 371 (520)
T 1s3e_A 292 GSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKV 371 (520)
T ss_dssp CCEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred cceEEEEEEeCCCcccCCCCCceeeccCCCCceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHH
Confidence 9999999999999997544445432 22 12223333332333347888999888888899999999999999999999
Q ss_pred CCC--CCCCcEEEEccCCCCCCCCCcCC-CCCCCCChHHHHHHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHH
Q 016772 275 LPD--ASSPIQYLVSHWGTDANSLGSYS-YDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 351 (383)
Q Consensus 275 ~~~--~~~~~~~~~~~W~~~~~~~g~y~-~~~~g~~~~~~~~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~ 351 (383)
||. ...|..+..++|.+++|+.|+|+ +..+|+.....+.+++|++||||||++++..++|+|+||+.||++||++|+
T Consensus 372 ~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~ 451 (520)
T 1s3e_A 372 LGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREIL 451 (520)
T ss_dssp HTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHH
T ss_pred hCccccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHH
Confidence 985 35788999999999999999998 677776443445678899999999999988788999999999999999998
Q ss_pred HHHH
Q 016772 352 MRVL 355 (383)
Q Consensus 352 ~~l~ 355 (383)
+.+.
T Consensus 452 ~~l~ 455 (520)
T 1s3e_A 452 HAMG 455 (520)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 8763
No 6
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=7.6e-36 Score=290.10 Aligned_cols=287 Identities=20% Similarity=0.232 Sum_probs=224.9
Q ss_pred CCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCC-ccChhcccccccc-----------CCCceeccCC
Q 016772 53 DMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAE-TISLKSWDKEELL-----------PGGHGLMVRG 119 (383)
Q Consensus 53 d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~S~~~~~~~~~~-----------~g~~~~~~gG 119 (383)
++|+.+++.+.+.. . .+..++.+ +.+.++.+++ ++|+..+...... .+..++++||
T Consensus 145 ~~s~~~~l~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG 213 (453)
T 2yg5_A 145 TVSFKQWLINQSDD-------A----EARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGG 213 (453)
T ss_dssp SSBHHHHHHHHCSC-------H----HHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTC
T ss_pred hccHHHHHHhhcCC-------H----HHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCC
Confidence 67899998865411 1 22223333 4567888998 9998775421111 1235689999
Q ss_pred hHHHHHHHHccC--CcccCceeEEEEecCCe-eEEEECCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhcC
Q 016772 120 YLPVINTLAKGL--DIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLG 196 (383)
Q Consensus 120 ~~~l~~~L~~~l--~I~l~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~ 196 (383)
+++|+++|++.+ +|++|++|++|..++++ |.|++ +|+++.||+||+|+|+.+++ .+.|.|+||+.+.++++++.
T Consensus 214 ~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~--~l~~~p~lp~~~~~~i~~~~ 290 (453)
T 2yg5_A 214 MQQVSIRMAEALGDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNLYS--RISYDPPLPRRQHQMHQHQS 290 (453)
T ss_dssp THHHHHHHHHHHGGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGGGG--GSEEESCCCHHHHHHGGGEE
T ss_pred hHHHHHHHHHhcCCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHHh--cCEeCCCCCHHHHHHHhcCC
Confidence 999999999865 79999999999998888 88887 67789999999999999887 45688999999999999999
Q ss_pred CcccceEEEEcCCCCCCCCCcceeecCC-CCceeEeeeccCCCC-CceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHh
Q 016772 197 VGIENKIIMHFDKVFWPNVEFLGVVSDT-SYGCSYFLNLHKATG-HCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKI 274 (383)
Q Consensus 197 ~~~~~kv~l~~~~~~w~~~~~~g~~~~~-~~~~~~~~~~~~~~g-~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~ 274 (383)
+++..|+++.|+++||++..+.|.+... ......+++. .+++ .++|++++.++.+..|..++++++++.++++|+++
T Consensus 291 ~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 369 (453)
T 2yg5_A 291 LGLVIKVHAVYETPFWREDGLSGTGFGASEVVQEVYDNT-NHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARY 369 (453)
T ss_dssp ECCEEEEEEEESSCGGGGGTEEEEEECTTSSSCEEEECC-CTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEECCCCCCCCCCCceeecCCCCeEEEEeCC-CCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999754444544322 2222333333 3433 46888888888888898999999999999999999
Q ss_pred CCC-CCCCcEEEEccCCCCCCCCCcCC-CCCCCCChHHHHHHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 275 LPD-ASSPIQYLVSHWGTDANSLGSYS-YDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 275 ~~~-~~~~~~~~~~~W~~~~~~~g~y~-~~~~g~~~~~~~~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+|. ...|..+..++|.+++|++|+|+ ...+|......+.+++|++||||||++++..++|+||||+.||++||++|++
T Consensus 370 ~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 449 (453)
T 2yg5_A 370 LGPKAEEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIA 449 (453)
T ss_dssp HCGGGGCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHH
T ss_pred hCccCCCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHH
Confidence 985 56788999999999999999986 4566654333446788999999999999987788999999999999999987
Q ss_pred HH
Q 016772 353 RV 354 (383)
Q Consensus 353 ~l 354 (383)
.+
T Consensus 450 ~l 451 (453)
T 2yg5_A 450 RS 451 (453)
T ss_dssp HC
T ss_pred Hh
Confidence 64
No 7
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=9.1e-34 Score=276.84 Aligned_cols=266 Identities=29% Similarity=0.435 Sum_probs=211.9
Q ss_pred cCCCCCccChhccccc---cccCCCcee--ccCChHHHHHHHHccC-------------CcccCceeEEEEecCCeeEEE
Q 016772 91 FAADAETISLKSWDKE---ELLPGGHGL--MVRGYLPVINTLAKGL-------------DIRLGHRVTKITRHYIGVKVT 152 (383)
Q Consensus 91 ~~~~~~~~S~~~~~~~---~~~~g~~~~--~~gG~~~l~~~L~~~l-------------~I~l~~~V~~I~~~~~~v~V~ 152 (383)
++.+++.+|+..+... ....+..+. +.||+++|+++|++.+ +|++|++|++|..++++|.|+
T Consensus 171 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~ 250 (472)
T 1b37_A 171 FAEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVK 250 (472)
T ss_dssp HSSCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEE
T ss_pred hcccccccchhhccccccccccCCceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEE
Confidence 5667777776543311 011222233 3799999999998753 699999999999999999999
Q ss_pred ECCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhcCCcccceEEEEcCCCCCCCCCcceeec--CCCC-cee
Q 016772 153 VEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVS--DTSY-GCS 229 (383)
Q Consensus 153 ~~~G~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~--~~~~-~~~ 229 (383)
+.+|++++||+||+|+|+.+++.+.+.|.|+||+.+.++++++.|+++.||++.|+++||++....+++. +... ...
T Consensus 251 ~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 330 (472)
T 1b37_A 251 TEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYG 330 (472)
T ss_dssp ETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSC
T ss_pred ECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccce
Confidence 9999889999999999999998766789999999999999999999999999999999997522222221 1111 112
Q ss_pred Eeeecc-CCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhCCC--CCCCcEEEEccCCCCCCCCCcCCCCCCCC
Q 016772 230 YFLNLH-KATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSYSYDTVGK 306 (383)
Q Consensus 230 ~~~~~~-~~~g~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~~~~--~~~~~~~~~~~W~~~~~~~g~y~~~~~g~ 306 (383)
.+.... ..++.++|++++.++.+..|..++++++.+.++++|++++|+ .++|+.+.+++|..++|+.|+|+...+|+
T Consensus 331 ~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~ 410 (472)
T 1b37_A 331 VWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGV 410 (472)
T ss_dssp EEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTC
T ss_pred eeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCC
Confidence 222211 123456787777777677788899999999999999999965 46788888899999999999999878888
Q ss_pred ChHHHHHHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 307 SHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 307 ~~~~~~~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
....++.+++|++||||||+++++.++|+|+||+.||++||++|++.+..
T Consensus 411 ~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 411 NRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp CHHHHHHHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 76667889999999999999999877899999999999999999988754
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=9.3e-34 Score=278.44 Aligned_cols=285 Identities=18% Similarity=0.211 Sum_probs=220.7
Q ss_pred CCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHhhhhhcCCCCCccChhcccccccc----------CCCceeccCChHH
Q 016772 53 DMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEELL----------PGGHGLMVRGYLP 122 (383)
Q Consensus 53 d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~----------~g~~~~~~gG~~~ 122 (383)
++|+.+++++..... +...+++++.+ +...++.+++++|+..+...... ..+.+.+.||++.
T Consensus 185 ~~s~~~~l~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~ 256 (495)
T 2vvm_A 185 EMSYSERIDQIRDEL-----SLNERSSLEAF---ILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSA 256 (495)
T ss_dssp TSBHHHHHHHHGGGC-----CHHHHHHHHHH---HHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHH
T ss_pred hhhHHHHHHHhhccC-----CHHHHHHHHHH---HHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHH
Confidence 578888887642100 11122333322 45667899999998765421100 1235678999999
Q ss_pred HHHHHHcc------CCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhcC
Q 016772 123 VINTLAKG------LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLG 196 (383)
Q Consensus 123 l~~~L~~~------l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~ 196 (383)
|+++|++. ++|++|++|++|..++++|.|++.+|++++||+||+|+|+++++. +.|.|+||+.+.++++.+.
T Consensus 257 l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~lp~~~~~ai~~~~ 334 (495)
T 2vvm_A 257 FARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERISAMQAGH 334 (495)
T ss_dssp HHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGG--SEEESCCCHHHHHHHHHCC
T ss_pred HHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhh--eeeCCCCCHHHHHHHHhcC
Confidence 99999874 349999999999998888999999998899999999999999874 5689999999999999999
Q ss_pred CcccceEEEEcCCCCCCCCCcceeecCCCCceeEeeeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhCC
Q 016772 197 VGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILP 276 (383)
Q Consensus 197 ~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~~~ 276 (383)
|++..|+++.|++++|. .+.|...+.......+.+...+.+..+|++|+.. .+ . +++++..+.++++|+++++
T Consensus 335 ~~~~~kv~l~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~-~~-~---~~~~e~~~~~~~~L~~~~~ 407 (495)
T 2vvm_A 335 VSMCTKVHAEVDNKDMR--SWTGIAYPFNKLCYAIGDGTTPAGNTHLVCFGNS-AN-H---IQPDEDVRETLKAVGQLAP 407 (495)
T ss_dssp CCCCEEEEEEESCGGGG--GEEEEECSSCSSCEEEEEEECTTSCEEEEEEECS-TT-C---CCTTTCHHHHHHHHHTTST
T ss_pred CCceeEEEEEECCccCC--CceeEecCCCCcEEEecCCCCCCCCeEEEEEeCc-cc-c---CCCHHHHHHHHHHHHHhcC
Confidence 99999999999999984 4455544332233334343445566788877643 22 1 4556677889999999988
Q ss_pred CCCCCcEEEEccCCCCCCCCCcCCCCCCCCChHHHHHHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHH
Q 016772 277 DASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 277 ~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
....|..+..++|.++||++|+|++..+|.....++.+++|.++|||||++++..++|+||||++||++||++|++.+
T Consensus 408 ~~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l 485 (495)
T 2vvm_A 408 GTFGVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEEL 485 (495)
T ss_dssp TSCCEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHh
Confidence 756788899999999999999999888887655678889999999999999998788999999999999999998876
No 9
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=2.9e-32 Score=263.14 Aligned_cols=305 Identities=19% Similarity=0.249 Sum_probs=222.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHhh--------CCCCCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHhhhhhcCCCC
Q 016772 24 VPQELVTKVGEAFESILKETDKVREE--------HDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADA 95 (383)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (383)
.+......+...+..+.....+.... ...|.|+.+++.+... ....+.++..+ ....++.++
T Consensus 103 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~~~-------~~~~~~~~~~~---~~~~~~~~~ 172 (431)
T 3k7m_X 103 IPGSEAVAVEAATYTLLRDAHRIDLEKGLENQDLEDLDIPLNEYVDKLDL-------PPVSRQFLLAW---AWNMLGQPA 172 (431)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTCCTTTCTTSSSCGGGCSBHHHHHHHHTC-------CHHHHHHHHHH---HHHHHSSCT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCCccCcchhhhcCCHHHHHHhcCC-------CHHHHHHHHHH---HHHhcCCCh
Confidence 45556555555555555443322110 1124788888865321 11222232222 455678899
Q ss_pred CccChhccccccc---------cCCCceeccCChHHHHHHHHccC-CcccCceeEEEEecCCeeEEEECCCcEEEcCEEE
Q 016772 96 ETISLKSWDKEEL---------LPGGHGLMVRGYLPVINTLAKGL-DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVV 165 (383)
Q Consensus 96 ~~~S~~~~~~~~~---------~~g~~~~~~gG~~~l~~~L~~~l-~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI 165 (383)
.++|+..+..... +......+.+|++.+++++++.+ +|++|++|++|..++++|.|++.+|++++||+||
T Consensus 173 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~g~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi 252 (431)
T 3k7m_X 173 DQASALWMLQLVAAHHYSILGVVLSLDEVFSNGSADLVDAMSQEIPEIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVI 252 (431)
T ss_dssp TTSBHHHHHHHHHHTTSCHHHHHHTCCEEETTCTHHHHHHHHTTCSCEESSCCEEEEECSSSSEEEEETTSCCEEEEEEE
T ss_pred hhhhHHHHHHHHHhcCCccceeecchhhhcCCcHHHHHHHHHhhCCceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEE
Confidence 9999876542111 11112267999999999999865 8999999999999988999999999889999999
Q ss_pred EecChHHHhcCCcccCCCCcHHHHHHHhhcCCcccceEEEEcCCCCCCCCCcceeecCCCCceeEeeeccCCCCCceEEE
Q 016772 166 VAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHKATGHCVLVY 245 (383)
Q Consensus 166 ~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~l~~ 245 (383)
+|+|+++++ .+.|.|+||..+.++++.+.++...||.+.|+++|| +.++ .........+.......+..+|++
T Consensus 253 ~a~~~~~l~--~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~---~i~~--~~d~~~~~~~~~~~~~~~~~~l~~ 325 (431)
T 3k7m_X 253 VATPMNTWR--RIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEA---GIEC--VGDGIFPTLYDYCEVSESERLLVA 325 (431)
T ss_dssp ECSCGGGGG--GSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCT---TEEE--EBSSSSSEEEEEEECSSSEEEEEE
T ss_pred EecCcchHh--heeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCc---CceE--cCCCCEEEEEeCcCCCCCCeEEEE
Confidence 999999997 467899999999999999999999999999999975 2333 222222223332222245567888
Q ss_pred EecchhhHHHhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEEccCCCCCCCCCcCCCCCCCCChHHHHHHhCCCCCEEEec
Q 016772 246 MPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAG 325 (383)
Q Consensus 246 ~~~g~~a~~~~~~~~ee~~~~v~~~L~~~~~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~~~~p~~~l~faG 325 (383)
++.++. +...+. +.+.+.|++++++.. |..+..++|..|||++|+|++..||+....++.+++|.+||||||
T Consensus 326 ~~~g~~---~~~~~~----~~~~~~l~~~~~~~~-~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAG 397 (431)
T 3k7m_X 326 FTDSGS---FDPTDI----GAVKDAVLYYLPEVE-VLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVG 397 (431)
T ss_dssp EEETTT---CCTTCH----HHHHHHHHHHCTTCE-EEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECS
T ss_pred Eecccc---CCCCCH----HHHHHHHHHhcCCCC-ccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEe
Confidence 887654 333333 246678888888743 788888999999999999999999987677788999999999999
Q ss_pred cccCCCCCchhhHHHHHHHHHHHHHHHH
Q 016772 326 EATSMSYPGSVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 326 ~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 353 (383)
++|+..|.|+||||++||+|||++|+..
T Consensus 398 e~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 398 SDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp GGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred hhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 9999989999999999999999999864
No 10
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=1.3e-32 Score=270.53 Aligned_cols=242 Identities=21% Similarity=0.293 Sum_probs=197.9
Q ss_pred CCceeccCChHHHHHHHHccC--CcccCceeEEEEecCCeeEEEECCCc----EEEcCEEEEecChHHHhcCCcccCCCC
Q 016772 111 GGHGLMVRGYLPVINTLAKGL--DIRLGHRVTKITRHYIGVKVTVEGGK----TFVADAVVVAVPLGVLKARTIKFEPRL 184 (383)
Q Consensus 111 g~~~~~~gG~~~l~~~L~~~l--~I~l~~~V~~I~~~~~~v~V~~~~G~----~~~ad~VI~t~p~~~l~~~~i~f~p~L 184 (383)
.....+.||+++|+++|++.+ +|++|++|++|.+++++|.|++.+|+ +++||+||+|+|+..+. .+.|.|+|
T Consensus 231 ~~~~~~~gG~~~l~~~l~~~l~~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~--~i~f~p~L 308 (498)
T 2iid_A 231 KRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVR--LIKFNPPL 308 (498)
T ss_dssp CCEEEETTCTTHHHHHHHHHTGGGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHT--TSEEESCC
T ss_pred cceEEeCCcHHHHHHHHHHhcccccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHh--heecCCCC
Confidence 345689999999999999988 69999999999999889999887764 48999999999999876 57889999
Q ss_pred cHHHHHHHhhcCCcccceEEEEcCCCCCCCCCcceee--cCCCCceeEeeeccCCCCCceEEEEecchhhHHHhcCCHHH
Q 016772 185 PDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVV--SDTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEA 262 (383)
Q Consensus 185 p~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~--~~~~~~~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~ee 262 (383)
|+.+.+++++++|++..||++.|+++||++.+.+|.. .+.+.....+.+...+++.++|++++.++.+..+..+++++
T Consensus 309 p~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~~~ 388 (498)
T 2iid_A 309 LPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKD 388 (498)
T ss_dssp CHHHHHHHHHCCEECEEEEEEEESSCGGGGGTCCSSEEEESSTTCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCHHH
T ss_pred CHHHHHHHHhCCCcceeEEEEEeCCCCccCCCccCCcccCCCCcceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCHHH
Confidence 9999999999999999999999999999653333322 11122222332322356677888888888888888899999
Q ss_pred HHHHHHHHHHHhCCCCCC-----CcEEEEccCCCCCCCCCcCCCCCCCCChHHHHHHhCCCCCEEEeccccCCCCCchhh
Q 016772 263 AANFAFTQLKKILPDASS-----PIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVH 337 (383)
Q Consensus 263 ~~~~v~~~L~~~~~~~~~-----~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~~~~p~~~l~faG~~~~~~~~g~v~ 337 (383)
+.+.++++|+++++.... +..+.+++|.++||+.|+|++..++......+.+.+|.+||||||++++.. .|+|+
T Consensus 389 ~~~~~l~~L~~~~g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~-~g~~~ 467 (498)
T 2iid_A 389 CADIVFNDLSLIHQLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQA-HGWID 467 (498)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSS-SSCHH
T ss_pred HHHHHHHHHHHHcCCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccC-CcCHH
Confidence 999999999999973111 123677899999999999998888765556678889999999999999865 48999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 016772 338 GAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 338 gA~~SG~~aA~~i~~~l~ 355 (383)
||+.||++||++|++.+.
T Consensus 468 GAi~SG~raA~~i~~~l~ 485 (498)
T 2iid_A 468 STIKSGLRAARDVNLASE 485 (498)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999998874
No 11
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.97 E-value=2.5e-30 Score=253.63 Aligned_cols=240 Identities=20% Similarity=0.258 Sum_probs=191.3
Q ss_pred CCceeccCChHHHHHHHHccC---CcccCceeEEEEecCCeeEEEECCC---cEEEcCEEEEecChHHHhcCCcccCCCC
Q 016772 111 GGHGLMVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGG---KTFVADAVVVAVPLGVLKARTIKFEPRL 184 (383)
Q Consensus 111 g~~~~~~gG~~~l~~~L~~~l---~I~l~~~V~~I~~~~~~v~V~~~~G---~~~~ad~VI~t~p~~~l~~~~i~f~p~L 184 (383)
+..++++||+++|+++|++.+ +|++|++|++|.+++++|.|++.+| ++++||+||+|+|+.+++. +.+ +|
T Consensus 229 ~~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~--l~~--~l 304 (489)
T 2jae_A 229 MMMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGR--LQN--NL 304 (489)
T ss_dssp SSEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTT--SEE--CC
T ss_pred ccEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHh--Ccc--CC
Confidence 346789999999999999876 4999999999999999999988776 6799999999999999874 344 68
Q ss_pred cHHHHHHHhhcCCcccceEEEEcCCCCCCCC-Ccceeec-CCCCceeEe-eeccCCCCCceEE-EEecchhhHHHhcCCH
Q 016772 185 PDWKEAAIDDLGVGIENKIIMHFDKVFWPNV-EFLGVVS-DTSYGCSYF-LNLHKATGHCVLV-YMPAGQLARDIEKMSD 260 (383)
Q Consensus 185 p~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~-~~~g~~~-~~~~~~~~~-~~~~~~~g~~~l~-~~~~g~~a~~~~~~~~ 260 (383)
|+.+.++++++.|++..|+++.|+++||++. ..+|.+. +.......+ .+...+...++|+ +|+.++.+..|..+++
T Consensus 305 ~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~g~~~~~~~~~~~ 384 (489)
T 2jae_A 305 PGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFPYDHYNSDRGVVVAYYSSGKRQEAFESLTH 384 (489)
T ss_dssp CHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECCSSSTTSSCEEEEEEEEETHHHHHHHTSCH
T ss_pred CHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeCCCCCCCCCCEEEEEeeCCchhhhhhcCCH
Confidence 9999999999999999999999999999543 5554332 211122222 2211111234555 5788888888999999
Q ss_pred HHHHHHHHHHHHHhCCC--CCCCcEEEEccCCCCCCCCCcCCCCC------CCCChHHHHHHhCCCCCEEEeccccCCCC
Q 016772 261 EAAANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSYSYDT------VGKSHDLYERLRIPVDNLFFAGEATSMSY 332 (383)
Q Consensus 261 ee~~~~v~~~L~~~~~~--~~~~~~~~~~~W~~~~~~~g~y~~~~------~g~~~~~~~~~~~p~~~l~faG~~~~~~~ 332 (383)
+++++.++++|++++|. ...+.....++|.+++|+.|+|+... ++.....++.+++|.+||||||++++. +
T Consensus 385 ~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~faG~~~~~-~ 463 (489)
T 2jae_A 385 RQRLAKAIAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYFAGDHLSN-A 463 (489)
T ss_dssp HHHHHHHHHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEECSGGGBS-S
T ss_pred HHHHHHHHHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEEeEHHhcc-C
Confidence 99999999999999986 35667777889999999999998665 665556678888999999999999975 5
Q ss_pred CchhhHHHHHHHHHHHHHHHHHH
Q 016772 333 PGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 333 ~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
+++|+||+.||++||++|++.+.
T Consensus 464 ~~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 464 IAWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999998765
No 12
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.97 E-value=1.9e-29 Score=245.79 Aligned_cols=278 Identities=19% Similarity=0.246 Sum_probs=211.2
Q ss_pred CCCCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhccccc-cc--------c-----------
Q 016772 51 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKE-EL--------L----------- 109 (383)
Q Consensus 51 ~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~~~-~~--------~----------- 109 (383)
..++|+.+++++. ++.++.+.++.+ +.++|+.+++++|+...... .. .
T Consensus 147 ~~~~s~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (470)
T 3i6d_A 147 KDDQSLGEFFRRR-----------VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGS 215 (470)
T ss_dssp SSCCBHHHHHHHH-----------SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC--------------------
T ss_pred CCCcCHHHHHHHh-----------cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccc
Confidence 3578999998763 344556666665 67889999999998753311 00 0
Q ss_pred --------CCCceeccCChHHHHHHHHccC---CcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHHHhcCCc
Q 016772 110 --------PGGHGLMVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTI 178 (383)
Q Consensus 110 --------~g~~~~~~gG~~~l~~~L~~~l---~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~l~~~~i 178 (383)
.+....+++|++.|+++|++.+ +|++|++|++|..++++|.|++.+|++++||+||+|+|+++++++
T Consensus 216 ~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l-- 293 (470)
T 3i6d_A 216 GQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGM-- 293 (470)
T ss_dssp -----------EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHHH--
T ss_pred cccccccCCceEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHHH--
Confidence 1245678999999999999988 699999999999998899999999988999999999999998753
Q ss_pred ccCCCCcHHHHHHHhhcCCcccceEEEEcCCCCCCC-CCcceeecCCCCc---e-eEee----eccCCCCCceEEEEecc
Q 016772 179 KFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTSYG---C-SYFL----NLHKATGHCVLVYMPAG 249 (383)
Q Consensus 179 ~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~-~~~~g~~~~~~~~---~-~~~~----~~~~~~g~~~l~~~~~g 249 (383)
.+.|++ .++++++.|+++.|+++.|++++|+. ...+|++.+.... . ..++ +...+++..+|.+++.+
T Consensus 294 ~~~~~~----~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~ 369 (470)
T 3i6d_A 294 LSELPA----ISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGK 369 (470)
T ss_dssp TTTSTT----HHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECC
T ss_pred cCCchh----hHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECC
Confidence 333433 57889999999999999999999964 4567777554321 1 1121 12345566778888877
Q ss_pred hhhHHHhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEEccCCCCCCCCCcCCCCCCCCCh---HHHHHHhCCCCCEEEecc
Q 016772 250 QLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSH---DLYERLRIPVDNLFFAGE 326 (383)
Q Consensus 250 ~~a~~~~~~~~ee~~~~v~~~L~~~~~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~---~~~~~~~~p~~~l~faG~ 326 (383)
..+..+..++++++++.++++|+++||....|....+++|.. +.+.| .+|+.. ...+.+.+|.+||||||+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~---a~p~~---~~g~~~~~~~~~~~l~~~~~~l~~aG~ 443 (470)
T 3i6d_A 370 AGDESIVDLSDNDIINIVLEDLKKVMNINGEPEMTCVTRWHE---SMPQY---HVGHKQRIKELREALASAYPGVYMTGA 443 (470)
T ss_dssp SSCCGGGTSCHHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEE---EEEEC---BTTHHHHHHHHHHHHHHHSTTEEECST
T ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCCCceEEEEEEcCC---ccCCC---CCCHHHHHHHHHHHHHhhCCCEEEEee
Confidence 777778889999999999999999998766888889999954 33333 344322 234456677889999999
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHHHHHH
Q 016772 327 ATSMSYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 327 ~~~~~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
++.+ .+|++|+.||+++|++|++.|
T Consensus 444 ~~~g---~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 444 SFEG---VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp TTSC---CSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 9864 369999999999999998875
No 13
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.96 E-value=3.4e-28 Score=237.61 Aligned_cols=275 Identities=18% Similarity=0.213 Sum_probs=208.8
Q ss_pred CCCCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhcccccc--------c-------------
Q 016772 51 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKEE--------L------------- 108 (383)
Q Consensus 51 ~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~~~~--------~------------- 108 (383)
..++|+.+|+.+. ++.++.+.++.+ +.++|+.+++++|+....... .
T Consensus 145 ~~~~s~~~~l~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 213 (475)
T 3lov_A 145 EQDIPLGEYLRPR-----------LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQ 213 (475)
T ss_dssp SSCCBHHHHHHHH-----------HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC---
T ss_pred CCCcCHHHHHHHH-----------hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhccccc
Confidence 3578999999763 455667767766 788999999999986432100 0
Q ss_pred ----------cCCCceeccCChHHHHHHHHccC---CcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHHHhc
Q 016772 109 ----------LPGGHGLMVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKA 175 (383)
Q Consensus 109 ----------~~g~~~~~~gG~~~l~~~L~~~l---~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~l~~ 175 (383)
..+...+++||+++|+++|++.+ +|++|++|++|..++++|.|++.+| +++||+||+|+|+.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ 292 (475)
T 3lov_A 214 LPQTPQTTIKATGQFLSLETGLESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQ 292 (475)
T ss_dssp -----------CCSEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHH
T ss_pred ccccccccccCCCcEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHH
Confidence 02345679999999999999987 6999999999999999999999999 799999999999999875
Q ss_pred CCcccCCCCcHHHHHHHhhcCCcccceEEEEcCCCCCCCCCcceeecCCCCce----eEeee----ccCCCCCceEEEEe
Q 016772 176 RTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGC----SYFLN----LHKATGHCVLVYMP 247 (383)
Q Consensus 176 ~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~----~~~~~----~~~~~g~~~l~~~~ 247 (383)
+ .+.|++ ++++++.|+++.|+++.|+++++.+.+.+|++.+..... ..+.+ ...++ ..+|.+++
T Consensus 293 l--l~~~~~-----~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~ 364 (475)
T 3lov_A 293 L--LPDAHL-----PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFV 364 (475)
T ss_dssp H--CTTSCC-----HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEE
T ss_pred H--cCccCH-----HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEe
Confidence 3 334433 678899999999999999999854445677775543211 11221 11233 45677888
Q ss_pred cchhhHHHhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEEccCCCCCCCCCcCCCCCCCCCh---HHHHHHhCCCCCEEEe
Q 016772 248 AGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSH---DLYERLRIPVDNLFFA 324 (383)
Q Consensus 248 ~g~~a~~~~~~~~ee~~~~v~~~L~~~~~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~---~~~~~~~~p~~~l~fa 324 (383)
.+..+..+..++++++++.++++|+++||....|....+++|... .+.| .+|+.. ...+.+.+|++|||||
T Consensus 365 ~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a---~p~~---~~g~~~~~~~~~~~l~~~~~~l~~a 438 (475)
T 3lov_A 365 GRPGNDHLVHESDEVLQQAVLQDLEKICGRTLEPKQVIISRLMDG---LPAY---TVGHADRIQRVREEVLAQYPGIYLA 438 (475)
T ss_dssp CBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEEEE---EECC---CTTHHHHHHHHHHHHHHHSTTEEEC
T ss_pred CCCCCCcccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEEEcccC---CCCC---CCChHHHHHHHHHHHHhhCCCEEEE
Confidence 777777788899999999999999999987567888999999653 3333 444321 2334566778899999
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHHHHHH
Q 016772 325 GEATSMSYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 325 G~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
|+++.. .+|++|+.||+++|++|++.+
T Consensus 439 G~~~~g---~g~~~a~~sG~~aA~~i~~~l 465 (475)
T 3lov_A 439 GLAYDG---VGLPDCVASAKTMIESIELEQ 465 (475)
T ss_dssp STTTSC---SSHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 999875 469999999999999998765
No 14
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.96 E-value=7.1e-28 Score=235.48 Aligned_cols=280 Identities=18% Similarity=0.167 Sum_probs=205.1
Q ss_pred CCCCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhccccc-----------------------
Q 016772 51 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKE----------------------- 106 (383)
Q Consensus 51 ~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~~~----------------------- 106 (383)
..++|+.+|+++.+ ++.+++.++.+ +.++|+.+++++|+.++...
T Consensus 146 ~~~~s~~~~l~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (478)
T 2ivd_A 146 GVDESLAAFGRRHL-----------GHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQR 214 (478)
T ss_dssp TCCCBHHHHHHHHT-----------CHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHhh-----------CHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccc
Confidence 45789999998743 34555555554 67788999999998643210
Q ss_pred -----cccC----CCceeccCChHHHHHHHHccC--CcccCceeEEEEecCCeeEEEE---CCCcEEEcCEEEEecChHH
Q 016772 107 -----ELLP----GGHGLMVRGYLPVINTLAKGL--DIRLGHRVTKITRHYIGVKVTV---EGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 107 -----~~~~----g~~~~~~gG~~~l~~~L~~~l--~I~l~~~V~~I~~~~~~v~V~~---~~G~~~~ad~VI~t~p~~~ 172 (383)
.... ++.++++||+++|+++|++.+ +|++|++|++|..++++|.|++ .+|++++||+||+|+|+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 215 QAALPAGTAPKLSGALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHA 294 (478)
T ss_dssp CC----CCSCCCCCCEEEETTCTHHHHHHHHHHHGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHH
T ss_pred cccCcccccccccccEEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHH
Confidence 0011 557789999999999999876 7999999999999888898888 6787899999999999999
Q ss_pred HhcCCcccCCCCcHHHHHHHhhcCCcccceEEEEcCCCCCCCCCcceeecCC--C--CceeEeeec----cCCCCCceEE
Q 016772 173 LKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDT--S--YGCSYFLNL----HKATGHCVLV 244 (383)
Q Consensus 173 l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~--~--~~~~~~~~~----~~~~g~~~l~ 244 (383)
+..+ .|++|+.+.++++++.++++.|+++.|++++|+..+.++.+.+. . .....+.+. ..+++..+|+
T Consensus 295 ~~~l----l~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~ 370 (478)
T 2ivd_A 295 TAKL----LRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYS 370 (478)
T ss_dssp HHHH----HTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEE
T ss_pred HHHH----hhccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEE
Confidence 8742 27789888999999999999999999999999653445555432 1 112223221 1245666788
Q ss_pred EEecchhhHHHhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEEccCCCCCCCCCcCCCCCCCCChHH---HHHHhCCCCCE
Q 016772 245 YMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDL---YERLRIPVDNL 321 (383)
Q Consensus 245 ~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~~~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~---~~~~~~p~~~l 321 (383)
+++.+..+..+..++++++.+.++++|++++|....|.....++|.. +++...+++.... .+.+.. ++||
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~------~~p~~~~g~~~~~~~~~~~~~~-~~~l 443 (478)
T 2ivd_A 371 CMVGGARQPGLVEQDEDALAALAREELKALAGVTARPSFTRVFRWPL------GIPQYNLGHLERVAAIDAALQR-LPGL 443 (478)
T ss_dssp EEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEESS------CCBCCBTTHHHHHHHHHHHHHT-STTE
T ss_pred EEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEECCC------cccCCCcCHHHHHHHHHHHHhh-CCCE
Confidence 88888777777788999999999999999998755777778889954 2322345442211 122333 6799
Q ss_pred EEeccccCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 322 FFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 322 ~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
||||+++.+ ++|+||+.||++||++|++.+.
T Consensus 444 ~~aG~~~~g---~gv~gA~~SG~~aA~~i~~~l~ 474 (478)
T 2ivd_A 444 HLIGNAYKG---VGLNDCIRNAAQLADALVAGNT 474 (478)
T ss_dssp EECSTTTSC---CSHHHHHHHHHHHHHHHCC---
T ss_pred EEEccCCCC---CCHHHHHHHHHHHHHHHHHhhc
Confidence 999999843 4699999999999999987654
No 15
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.95 E-value=1e-26 Score=217.55 Aligned_cols=228 Identities=16% Similarity=0.188 Sum_probs=181.9
Q ss_pred ceeccCChHHHHHHHHc--cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHH
Q 016772 113 HGLMVRGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEA 190 (383)
Q Consensus 113 ~~~~~gG~~~l~~~L~~--~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ 190 (383)
.+...+|++.++++|++ +++|+++++|++|..++++|.|++.+|+.++||+||+|+|++++..+...+.|.||+...+
T Consensus 104 ~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~ 183 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQ 183 (342)
T ss_dssp EEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHH
T ss_pred ceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHH
Confidence 45678999999999998 7789999999999999999999999897789999999999999876544455678888899
Q ss_pred HHhhcCCcccceEEEEcCCCCCCCCCcceeecCCCCc-eeEeeeccCC-----CCCceEEEEecchhhHHHhcCCHHHHH
Q 016772 191 AIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYG-CSYFLNLHKA-----TGHCVLVYMPAGQLARDIEKMSDEAAA 264 (383)
Q Consensus 191 ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~-~~~~~~~~~~-----~g~~~l~~~~~g~~a~~~~~~~~ee~~ 264 (383)
.++++.|+++.+|.+.|+++||.+.++.|.+.+.... ...+.+..++ ++...+++++.+.++.++.+++++++.
T Consensus 184 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 263 (342)
T 3qj4_A 184 QLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQ 263 (342)
T ss_dssp HHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHH
T ss_pred HHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHH
Confidence 9999999999999999999999777788887664332 2222332222 123478888888888888899999999
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEccCCCCCCCCCcCCCC-CCCCChHHHHHHh-CCCCCEEEeccccCCCCCchhhHHHHH
Q 016772 265 NFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYD-TVGKSHDLYERLR-IPVDNLFFAGEATSMSYPGSVHGAFST 342 (383)
Q Consensus 265 ~~v~~~L~~~~~~~~~~~~~~~~~W~~~~~~~g~y~~~-~~g~~~~~~~~~~-~p~~~l~faG~~~~~~~~g~v~gA~~S 342 (383)
+.++++|++++|..++|..+.+++|. |+.+.|... .+++ +. .+.++|++||+++.+ +++|+|+.|
T Consensus 264 ~~~~~~l~~~~g~~~~p~~~~v~rW~---~a~p~~~~~~~~~~-------~~~~~~~~l~laGd~~~g---~~v~~ai~s 330 (342)
T 3qj4_A 264 ELVFQQLENILPGLPQPIATKCQKWR---HSQVTNAAANCPGQ-------MTLHHKPFLACGGDGFTQ---SNFDGCITS 330 (342)
T ss_dssp HHHHHHHHHHSCSCCCCSEEEEEEET---TCSBSSCCSSSCSC-------EEEETTTEEEECSGGGSC---SSHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCceeeecccc---ccccccccCCCcce-------eEecCCccEEEEccccCC---CCccHHHHH
Confidence 99999999999977789999999994 555555431 1222 12 345689999999975 699999999
Q ss_pred HHHHHHHHHHH
Q 016772 343 GLMAAEDCRMR 353 (383)
Q Consensus 343 G~~aA~~i~~~ 353 (383)
|++||++|++.
T Consensus 331 g~~aa~~i~~~ 341 (342)
T 3qj4_A 331 ALCVLEALKNY 341 (342)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHhh
Confidence 99999998754
No 16
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.95 E-value=1.4e-27 Score=238.65 Aligned_cols=260 Identities=20% Similarity=0.177 Sum_probs=187.3
Q ss_pred CCCccChhccccc--cccCCCceeccCChHHHHHHHHccC----CcccCceeE--EEEecCCe-------eEE-EECCCc
Q 016772 94 DAETISLKSWDKE--ELLPGGHGLMVRGYLPVINTLAKGL----DIRLGHRVT--KITRHYIG-------VKV-TVEGGK 157 (383)
Q Consensus 94 ~~~~~S~~~~~~~--~~~~g~~~~~~gG~~~l~~~L~~~l----~I~l~~~V~--~I~~~~~~-------v~V-~~~~G~ 157 (383)
+....|+..++.. .......+.+.||+++|+++|++.+ .|+++++|+ +|.+.+++ |+| .+.+|+
T Consensus 318 ~~~~~S~le~L~~~~~~~~~~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~ 397 (721)
T 3ayj_A 318 PLYNISLVEMMRLILWDYSNEYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNA 397 (721)
T ss_dssp GGTTBBHHHHHHHHHTTTTCEECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCC
T ss_pred CccchhHHHHHHHHhcCCccceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCc
Confidence 3456666543211 1223346789999999999999875 499999999 99987655 888 456776
Q ss_pred --EEEcCEEEEecChHHHhc----CCcc-------c--------------CCC-C-c-------HHHHHHHhhcCCcccc
Q 016772 158 --TFVADAVVVAVPLGVLKA----RTIK-------F--------------EPR-L-P-------DWKEAAIDDLGVGIEN 201 (383)
Q Consensus 158 --~~~ad~VI~t~p~~~l~~----~~i~-------f--------------~p~-L-p-------~~~~~ai~~~~~~~~~ 201 (383)
+++||+||+|+|+++|.. ..+. + .|+ | | ..+++++++++|++..
T Consensus 398 ~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~ 477 (721)
T 3ayj_A 398 VHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSS 477 (721)
T ss_dssp EEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEE
T ss_pred eEEEEcCEEEECCCHHHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccce
Confidence 799999999999999853 2344 3 344 6 8 8999999999999999
Q ss_pred eEEEEc-----CCCCCCCC-C-cceee-cCCCCceeEeee-----ccCCCCCc-eEEEEecchhhHHH------hcCCHH
Q 016772 202 KIIMHF-----DKVFWPNV-E-FLGVV-SDTSYGCSYFLN-----LHKATGHC-VLVYMPAGQLARDI------EKMSDE 261 (383)
Q Consensus 202 kv~l~~-----~~~~w~~~-~-~~g~~-~~~~~~~~~~~~-----~~~~~g~~-~l~~~~~g~~a~~~------~~~~~e 261 (383)
||++.| +++||++. + ..+.. .+.+....++.. ...+++.+ +|..|++++.+..+ ..++++
T Consensus 478 Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~ 557 (721)
T 3ayj_A 478 KVFATVKTAALDQPWVPQWRGEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPA 557 (721)
T ss_dssp EEEEEEEGGGGGSTTSCEETTEECCEEEETTTTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESS
T ss_pred EEEEEEccccCCCCcccccCCCCceeeecCCCcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChH
Confidence 999999 99999753 1 12222 232222222211 11122333 56679999888888 555555
Q ss_pred HH-------HHHHHHHHH--HhCCCCC--------------CCcEEEEccCCCCCCCCCcCCCCCCCCCh--HHHHH---
Q 016772 262 AA-------ANFAFTQLK--KILPDAS--------------SPIQYLVSHWGTDANSLGSYSYDTVGKSH--DLYER--- 313 (383)
Q Consensus 262 e~-------~~~v~~~L~--~~~~~~~--------------~~~~~~~~~W~~~~~~~g~y~~~~~g~~~--~~~~~--- 313 (383)
+. ++.++++|+ +++|+.. .+.++...+|.++| +.|+|....||+.. ..+..
T Consensus 558 er~~~~~~~~~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~ 636 (721)
T 3ayj_A 558 TETGTADGMYRTMVNRAYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHT 636 (721)
T ss_dssp SSSCCCHHHHHHHHHHTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGG
T ss_pred HhhhhhhHHHHHHHHHHhhhccCccccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhh
Confidence 55 999999999 8887633 13456788999999 99999988898721 11111
Q ss_pred ---HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 314 ---LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 314 ---~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
+.+|.+++|||||+++. +.|+++||++||++||.+|+..+.
T Consensus 637 ~~~~~~~~gri~fAGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~ 680 (721)
T 3ayj_A 637 HALAASLDNRFFIASDSYSH-LGGWLEGAFMSALNAVAGLIVRAN 680 (721)
T ss_dssp GGGCTTTCCCEEECSGGGSS-CTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred hccccCCCCCEEEeehhhcc-CCceehHHHHHHHHHHHHHHHHhc
Confidence 23467899999999985 678999999999999999988763
No 17
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.95 E-value=6.1e-27 Score=230.38 Aligned_cols=282 Identities=18% Similarity=0.199 Sum_probs=203.3
Q ss_pred CCCCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhcccc-----c------------cc----
Q 016772 51 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDK-----E------------EL---- 108 (383)
Q Consensus 51 ~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~~-----~------------~~---- 108 (383)
..++|+.+|+++. +++++++.++.+ +.++|+.+++++|+.++.. + ..
T Consensus 147 ~~~~s~~~~l~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 215 (504)
T 1sez_A 147 DSHESVSGFFQRH-----------FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPK 215 (504)
T ss_dssp -CCCBHHHHHHHH-----------HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC--
T ss_pred CCCccHHHHHHHH-----------cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhccc
Confidence 3568999999874 455677777765 6788999999999864210 0 00
Q ss_pred ---------------cCCCceeccCChHHHHHHHHccC---CcccCceeEEEEecCCe------eEEEEC--CC---cEE
Q 016772 109 ---------------LPGGHGLMVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIG------VKVTVE--GG---KTF 159 (383)
Q Consensus 109 ---------------~~g~~~~~~gG~~~l~~~L~~~l---~I~l~~~V~~I~~~~~~------v~V~~~--~G---~~~ 159 (383)
...+.++++||+++|+++|++.+ +|++|++|++|.+++++ +.|++. +| +++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~ 295 (504)
T 1sez_A 216 NEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEE 295 (504)
T ss_dssp --------CCCSCCSTTCSCBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCC
T ss_pred ccccccccchhhccccCCceEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeE
Confidence 11246789999999999999976 59999999999998877 666654 45 578
Q ss_pred EcCEEEEecChHHHhcCCc-ccCCCCcHHHHHHHhhcCCcccceEEEEcCCCCCCC-CCcceeecCCCC------c-eeE
Q 016772 160 VADAVVVAVPLGVLKARTI-KFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTSY------G-CSY 230 (383)
Q Consensus 160 ~ad~VI~t~p~~~l~~~~i-~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~-~~~~g~~~~~~~------~-~~~ 230 (383)
+||+||+|+|+..++.+.. ...+++++.. ++++.++++.++++.|++++|++ .+.++++.+... . ...
T Consensus 296 ~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~---l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~ 372 (504)
T 1sez_A 296 SFDAVIMTAPLCDVKSMKIAKRGNPFLLNF---IPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTL 372 (504)
T ss_dssp EESEEEECSCHHHHHTSEEESSSSBCCCTT---SCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEE
T ss_pred ECCEEEECCCHHHHHHHhhcccCCcccHHH---HhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEE
Confidence 9999999999999986431 0112343322 67788999999999999999963 345666544211 1 111
Q ss_pred ee----eccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEEccCCCCCCCCCcCCCCCCCC
Q 016772 231 FL----NLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGK 306 (383)
Q Consensus 231 ~~----~~~~~~g~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~~~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~ 306 (383)
+. +...+++..+|++|+++..+..+..++++++++.++++|++++|....|..+.+++|.+. .+.| .+|+
T Consensus 373 ~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~---~p~~---~~g~ 446 (504)
T 1sez_A 373 FSSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKA---FPLY---GHNY 446 (504)
T ss_dssp EHHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEE---EECC---CTTH
T ss_pred eeccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCC---CCcc---CcCH
Confidence 21 122355666788899888777788899999999999999999986556888888999642 1222 3333
Q ss_pred ChH--HHHHHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 307 SHD--LYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 307 ~~~--~~~~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
... ......+|++||||||+++++ ++|+||+.||++||++|++.+.
T Consensus 447 ~~~~~~~~~~~~~~~~l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~ 494 (504)
T 1sez_A 447 DSVLDAIDKMEKNLPGLFYAGNHRGG---LSVGKALSSGCNAADLVISYLE 494 (504)
T ss_dssp HHHHHHHHHHHHHSTTEEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHh
Confidence 211 123345678899999999873 5899999999999999988763
No 18
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.93 E-value=1.1e-25 Score=219.81 Aligned_cols=277 Identities=18% Similarity=0.153 Sum_probs=204.0
Q ss_pred CCCCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhccccc--c--------------------
Q 016772 51 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKE--E-------------------- 107 (383)
Q Consensus 51 ~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~~~--~-------------------- 107 (383)
..++|+.+|+++ ++++++.+.++.+ +.++|+.+++++|+..+... .
T Consensus 141 ~~~~s~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~ 209 (477)
T 3nks_A 141 EPDETVHSFAQR-----------RLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTP 209 (477)
T ss_dssp SSCCBHHHHHHH-----------HHCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----
T ss_pred CCCcCHHHHHHH-----------hhCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhccccc
Confidence 357899999886 3456677777776 78899999999998775310 0
Q ss_pred -----------ccCCCceeccCChHHHHHHHHcc-----CCcccCceeEEEEecCCe-eEEEECCCcEEEcCEEEEecCh
Q 016772 108 -----------LLPGGHGLMVRGYLPVINTLAKG-----LDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 108 -----------~~~g~~~~~~gG~~~l~~~L~~~-----l~I~l~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
....+.++++||+++|+++|++. ++|++|++|++|..++++ |.|++. |.++.||+||+|+|+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~-~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 210 QPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLR-DSSLEADHVISAIPA 288 (477)
T ss_dssp CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECS-SCEEEESEEEECSCH
T ss_pred CCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEEC-CeEEEcCEEEECCCH
Confidence 00124578999999999999874 479999999999998777 788775 447999999999999
Q ss_pred HHHhcCCcccCCCCcHHHHHHHhhcCCcccceEEEEcCCCCCCCCCcceeecCCCC---c-eeEeeecc-----CCCCCc
Q 016772 171 GVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSY---G-CSYFLNLH-----KATGHC 241 (383)
Q Consensus 171 ~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~---~-~~~~~~~~-----~~~g~~ 241 (383)
..+..+ .|++++...+.+.++.|.++.++.+.|++++|+. +.+|++.+... . ...|++.. .+++..
T Consensus 289 ~~~~~l----l~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 363 (477)
T 3nks_A 289 SVLSEL----LPAEAAPLARALSAITAVSVAVVNLQYQGAHLPV-QGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGL 363 (477)
T ss_dssp HHHHHH----SCGGGHHHHHHHHTCCEEEEEEEEEEETTCCCSS-CSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCE
T ss_pred HHHHHh----ccccCHHHHHHHhcCCCCcEEEEEEEECCCCCCC-CCceEEccCCCCCCceEEEEeccccCCCCCCCCce
Confidence 998753 2445566778899999999999999999999964 44577765421 1 22232211 123567
Q ss_pred eEEEEecchhhHHHh----cCCHHHHHHHHHHHHHHhCCCCCCCcEEEEccCCCCCCCCCcCCCCCCCCChH---HHHHH
Q 016772 242 VLVYMPAGQLARDIE----KMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHD---LYERL 314 (383)
Q Consensus 242 ~l~~~~~g~~a~~~~----~~~~ee~~~~v~~~L~~~~~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~---~~~~~ 314 (383)
+|++++++.++..+. .++++++++.++++|+++++....|..+.+++|. ++.+.| .+|+... ....+
T Consensus 364 ~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~---~a~p~~---~~g~~~~~~~~~~~l 437 (477)
T 3nks_A 364 RVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHK---NCIPQY---TLGHWQKLESARQFL 437 (477)
T ss_dssp EEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEE---EEEECC---BTTHHHHHHHHHHHH
T ss_pred EEEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcC---CccCCC---CCCHHHHHHHHHHHH
Confidence 888888887766553 4689999999999999999865678888899994 344444 4544321 12233
Q ss_pred hCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 353 (383)
....++|++||+++.+ .+|++|+.||+++|++|+..
T Consensus 438 ~~~~~~l~l~G~~~~G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 438 TAHRLPLTLAGASYEG---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp HHTTCSEEECSTTTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred HhcCCCEEEEccCCCC---CcHHHHHHHHHHHHHHHHhc
Confidence 3334589999999854 47999999999999998763
No 19
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.90 E-value=1.3e-22 Score=195.11 Aligned_cols=274 Identities=14% Similarity=0.063 Sum_probs=187.3
Q ss_pred CCCCCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhcccc---ccccCCCceeccCChHHHHH
Q 016772 50 HDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDK---EELLPGGHGLMVRGYLPVIN 125 (383)
Q Consensus 50 ~~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~~---~~~~~g~~~~~~gG~~~l~~ 125 (383)
...+.|+.+++++.+. .+.++.++.+ ..+.++.+++++|+..+.. .....++..++.||++.|++
T Consensus 132 ~~~~~s~~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~gG~~~l~~ 200 (425)
T 3ka7_A 132 RPSGSSLQAWIKSQVS-----------DEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRFGGTGIPEGGCKGIID 200 (425)
T ss_dssp CCCSSBHHHHHHHHCC-----------CHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTSHHHHHH
T ss_pred CCCCCCHHHHHHHhcC-----------CHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhcCCccccCCCHHHHHH
Confidence 3457899999987541 2233334443 4566889999999865431 11223556789999999999
Q ss_pred HHHcc-----CCcccCceeEEEEecCCeeE-EEECCCcEEEcCEEEEecChHHHhcCCcccCCCC--cHHHHHHHhhcCC
Q 016772 126 TLAKG-----LDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRL--PDWKEAAIDDLGV 197 (383)
Q Consensus 126 ~L~~~-----l~I~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~t~p~~~l~~~~i~f~p~L--p~~~~~ai~~~~~ 197 (383)
+|++. .+|++|++|++|..++++|. |++. |++++||+||+|+|+..+..+ +...+.+ |+...+.++++.+
T Consensus 201 ~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~l-l~~~~~~~~~~~~~~~~~~~~~ 278 (425)
T 3ka7_A 201 ALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATAVL-CSEALSKEADAAYFKMVGTLQP 278 (425)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHHHH-TTTTCCTTTTHHHHHHHHHCCC
T ss_pred HHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHHHh-cCCcccccCCHHHHHHhhCcCC
Confidence 99873 57999999999999988887 7664 778999999999999998753 2222333 7777788999999
Q ss_pred cccceEEEEcCCCCCCCCCcceeecCCC-C-ce-eEe----eeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHH
Q 016772 198 GIENKIIMHFDKVFWPNVEFLGVVSDTS-Y-GC-SYF----LNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQ 270 (383)
Q Consensus 198 ~~~~kv~l~~~~~~w~~~~~~g~~~~~~-~-~~-~~~----~~~~~~~g~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~ 270 (383)
++..++++.|+++.+.. .+.+.+.+ . .. ..+ +....|+|+.++.+++...+ +. .+. +++.++.++++
T Consensus 279 ~~~~~v~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~-~~-~~~-~~~~~~~~~~~ 352 (425)
T 3ka7_A 279 SAGIKICLAADEPLVGH---TGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAP-EN-VKN-LESEIEMGLED 352 (425)
T ss_dssp BEEEEEEEEESSCSSCS---SSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECG-GG-GGG-HHHHHHHHHHH
T ss_pred CceEEEEeecCCCccCc---CEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEecccc-cc-ccc-hHHHHHHHHHH
Confidence 98899999999987632 23222221 1 11 111 12234667767666554322 11 122 24557999999
Q ss_pred HHHhCCCCCCCcEEEEccCCCCCCCCCcCCCCCCCCChHHHHHHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHH
Q 016772 271 LKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDC 350 (383)
Q Consensus 271 L~~~~~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i 350 (383)
|++++|+ ..+....+++|.. +.+.| .+++. .+.....|++|||+||+++.+.++.+|++|+.||++||++|
T Consensus 353 l~~~~p~-~~~~~~~v~~~~~---~~P~~---~~~~~--~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i 423 (425)
T 3ka7_A 353 LKEIFPG-KRYEVLLIQSYHD---EWPVN---RAASG--TDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKV 423 (425)
T ss_dssp HHHHSTT-CCEEEEEEEEEBT---TBCSB---SSCTT--CCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC-
T ss_pred HHHhCCC-CceEEEEEEEECC---Ccccc---ccccC--CCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHh
Confidence 9999986 3454556778854 23333 33321 22334678899999999999987789999999999999988
Q ss_pred H
Q 016772 351 R 351 (383)
Q Consensus 351 ~ 351 (383)
+
T Consensus 424 ~ 424 (425)
T 3ka7_A 424 L 424 (425)
T ss_dssp -
T ss_pred h
Confidence 6
No 20
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.88 E-value=6.3e-22 Score=193.18 Aligned_cols=278 Identities=11% Similarity=0.058 Sum_probs=192.8
Q ss_pred CCCCCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhccccccc---------------c----
Q 016772 50 HDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKEEL---------------L---- 109 (383)
Q Consensus 50 ~~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~~~~~---------------~---- 109 (383)
...+.|+++|+.+ .+++++++.++.+ ++++|+.+++++|+.++..... .
T Consensus 133 ~~~~~s~~e~~~~-----------~~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~ 201 (484)
T 4dsg_A 133 TEPPNNFEESFTR-----------QFGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGW 201 (484)
T ss_dssp SSCCSSHHHHHHH-----------HHHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCC
T ss_pred CCCCCCHHHHHHH-----------HhHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCC
Confidence 3468899999986 4677888877776 7889999999999976431100 0
Q ss_pred --CCCcee-ccCChHHHHHHHHccC---CcccC--ceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHHHhcCCcccC
Q 016772 110 --PGGHGL-MVRGYLPVINTLAKGL---DIRLG--HRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFE 181 (383)
Q Consensus 110 --~g~~~~-~~gG~~~l~~~L~~~l---~I~l~--~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~l~~~~i~f~ 181 (383)
.+...+ +.||+++|+++|++.+ +|+++ ++|++|..++++|. +.+|+++.||+||+|+|++.+..+.....
T Consensus 202 ~~~~~f~yp~~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~ 279 (484)
T 4dsg_A 202 GPNATFRFPQRGGTGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTG 279 (484)
T ss_dssp STTSEEEEESSSCTHHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHHHHHHEECSS
T ss_pred CccceEEeecCCCHHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHHHHHHhhccC
Confidence 011122 4599999999999988 69999 57999998888754 57888899999999999999875432234
Q ss_pred CCCcHHHHHHHhhcCCcccceEEEEcCCCCCCC-CCcceeecCCCCc----eeEeeec---cCCCCCceEEEEecchhhH
Q 016772 182 PRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTSYG----CSYFLNL---HKATGHCVLVYMPAGQLAR 253 (383)
Q Consensus 182 p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~-~~~~g~~~~~~~~----~~~~~~~---~~~~g~~~l~~~~~g~~a~ 253 (383)
|++|+...++++.+.|.++.++.+.|+.+...+ .+.++++.+.... ...+.+. ..|+++.+++..+...
T Consensus 280 ~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~--- 356 (484)
T 4dsg_A 280 FKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES--- 356 (484)
T ss_dssp CTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---
T ss_pred CCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC---
Confidence 568888889999999999999999998863211 2345655443221 1112222 1345555665554432
Q ss_pred HHhcCCHHHHHHHHHHHHHHhCCCCC-CCc-EEEEccCCCCCCCCCcCCCCCCCCCh---HHHHHHhCCCCCEEEecccc
Q 016772 254 DIEKMSDEAAANFAFTQLKKILPDAS-SPI-QYLVSHWGTDANSLGSYSYDTVGKSH---DLYERLRIPVDNLFFAGEAT 328 (383)
Q Consensus 254 ~~~~~~~ee~~~~v~~~L~~~~~~~~-~~~-~~~~~~W~~~~~~~g~y~~~~~g~~~---~~~~~~~~p~~~l~faG~~~ 328 (383)
..+.++++++++.++++|.++.+..+ +++ ...+.+| +++++.| .+|+.. ..++.+.+ . ||+++|...
T Consensus 357 ~~~~~~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~---~~~yP~y---~~~~~~~~~~~~~~l~~-~-~l~~~Gr~g 428 (484)
T 4dsg_A 357 KYKPVNHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRI---EKGYPTP---FIGRNNLLEKAQPELMS-R-CIYSRGRFG 428 (484)
T ss_dssp TTBCCCTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEE---EEEEECC---BTTHHHHHHHHHHHHHH-T-TEEECSTTT
T ss_pred cCCcCCHHHHHHHHHHHHHHcCCCCccceEEEEEEEEe---CccccCC---CccHHHHHHHHHHHHHh-C-CcEeecCCc
Confidence 34567899999999999999864322 333 3456788 3344444 455432 12333333 3 899999976
Q ss_pred CCCCC-chhhHHHHHHHHHHHHHH
Q 016772 329 SMSYP-GSVHGAFSTGLMAAEDCR 351 (383)
Q Consensus 329 ~~~~~-g~v~gA~~SG~~aA~~i~ 351 (383)
...|+ ..|+.|+.||.+||++|+
T Consensus 429 ~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 429 AWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp TCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred ccccCCCChHHHHHHHHHHHHHHH
Confidence 66543 479999999999999987
No 21
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.85 E-value=2.1e-20 Score=183.94 Aligned_cols=277 Identities=10% Similarity=0.021 Sum_probs=186.6
Q ss_pred hCCCCCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhccccccc---------------cCC-
Q 016772 49 EHDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKEEL---------------LPG- 111 (383)
Q Consensus 49 ~~~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~~~~~---------------~~g- 111 (383)
....+.|+.+|+.+ .+++.+.+.++.+ +.++|+.+++++|+.+...... ..+
T Consensus 138 ~~~~~~s~~~~~~~-----------~~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (513)
T 4gde_A 138 ANTKPKTFDEWIVR-----------MMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGN 206 (513)
T ss_dssp CCSCCCSHHHHHHH-----------HHHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCS
T ss_pred ccccccCHHHHHHH-----------hhhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccc
Confidence 34567899999876 5678888888876 7899999999999876432100 000
Q ss_pred ------CceeccCChHHHHHHHHccC-----CcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHHHhcCCccc
Q 016772 112 ------GHGLMVRGYLPVINTLAKGL-----DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKF 180 (383)
Q Consensus 112 ------~~~~~~gG~~~l~~~L~~~l-----~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~l~~~~i~f 180 (383)
..+.++||+++|+++|++.+ +|++|++|++|..++++ |++.+|+++.||+||+|+|++.|....
T Consensus 207 ~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~~l~~~l--- 281 (513)
T 4gde_A 207 WGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVDFLAEAM--- 281 (513)
T ss_dssp CBTTBEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHHHHHHHT---
T ss_pred cccccceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHHHHHHhc---
Confidence 02235799999999999876 49999999999987765 557899999999999999999987532
Q ss_pred CCCCcHHHHHHHhhcCCcccceEEEEcCCCCCCC-CCcceeecCC---------------------CCc---eeEeeecc
Q 016772 181 EPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDT---------------------SYG---CSYFLNLH 235 (383)
Q Consensus 181 ~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~-~~~~g~~~~~---------------------~~~---~~~~~~~~ 235 (383)
+ ++....+...+.|.++..|.+.++...... .+......+. ... ...+.+..
T Consensus 282 -~--~~~~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~ 358 (513)
T 4gde_A 282 -N--DQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGS 358 (513)
T ss_dssp -T--CHHHHHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSC
T ss_pred -C--chhhHhhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCC
Confidence 2 234456778899999888888887654321 1111111110 000 00111100
Q ss_pred ----CCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhCCCC--CCCcEEEEccCCCCCCCCCcCCCCCCCCCh-
Q 016772 236 ----KATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDA--SSPIQYLVSHWGTDANSLGSYSYDTVGKSH- 308 (383)
Q Consensus 236 ----~~~g~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~~~~~--~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~- 308 (383)
.+.+...+..++.+.....+..++++++++.++++|.++.+.. +.++...+.+| +++++.| ..|+..
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~---~~ayP~y---~~~~~~~ 432 (513)
T 4gde_A 359 RPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRF---DHGYPTP---TLEREGT 432 (513)
T ss_dssp CCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEE---EEEEECC---BTTHHHH
T ss_pred CcccccCCcceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEEC---CCeeccc---CHhHHHH
Confidence 1112223444444433456778899999999999999997642 34466777888 5555555 344322
Q ss_pred --HHHHHHhCCCCCEEEeccccCCCCC-chhhHHHHHHHHHHHHHHH
Q 016772 309 --DLYERLRIPVDNLFFAGEATSMSYP-GSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 309 --~~~~~~~~p~~~l~faG~~~~~~~~-g~v~gA~~SG~~aA~~i~~ 352 (383)
..++.+.. .|||++|-.-...|. +.|++|+.||..||++|++
T Consensus 433 ~~~~~~~l~~--~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 433 LTQILPKLQD--KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp HHHHHHHHHH--TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhh--cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 22344444 489999976555554 5899999999999999986
No 22
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.84 E-value=1.7e-20 Score=184.22 Aligned_cols=262 Identities=11% Similarity=0.031 Sum_probs=133.2
Q ss_pred hcCCCCCccChhccc-cccccCCCceeccCChHHHHHHHHcc-----CCcccCceeEEEEecCCeeE-EEECCCcEEEcC
Q 016772 90 WFAADAETISLKSWD-KEELLPGGHGLMVRGYLPVINTLAKG-----LDIRLGHRVTKITRHYIGVK-VTVEGGKTFVAD 162 (383)
Q Consensus 90 ~~~~~~~~~S~~~~~-~~~~~~g~~~~~~gG~~~l~~~L~~~-----l~I~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad 162 (383)
+++.++.+.+..... .......+.++++||+++|+++|++. .+|++|++|++|..++++++ |++.+|+++.||
T Consensus 189 ~~g~~p~~~~~~~~~~~~~~~~~G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad 268 (501)
T 4dgk_A 189 LVGGNPFATSSIYTLIHALEREWGVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQ 268 (501)
T ss_dssp HHHSCC--CCCTHHHHHHHHSCCCEEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECS
T ss_pred ccCCCcchhhhhhhhhhhhhccCCeEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcC
Confidence 345666666554432 22233456778999999999999873 47999999999999999987 889999999999
Q ss_pred EEEEecChHHHhcCCcccCCCCcHHHHHHHhhcCCc-ccceEEEEcCCCCCCCCCcceeecCC--------------CCc
Q 016772 163 AVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVG-IENKIIMHFDKVFWPNVEFLGVVSDT--------------SYG 227 (383)
Q Consensus 163 ~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~-~~~kv~l~~~~~~w~~~~~~g~~~~~--------------~~~ 227 (383)
+||+|+++..+...++.-. +++....+.+++..++ +..++++.++.+...-....-.+.+. +..
T Consensus 269 ~VV~~a~~~~~~~~Ll~~~-~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~ 347 (501)
T 4dgk_A 269 AVASNADVVHTYRDLLSQH-PAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAED 347 (501)
T ss_dssp CEEECCC----------------------------CCEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCE
T ss_pred EEEECCCHHHHHHHhcccc-ccchhhhhhhhccccCCceeEEEecccCCccccccceeccccchhhhccccccccccccC
Confidence 9999999887654333221 2344445566666654 45667888877542111100001000 000
Q ss_pred eeEe-------eeccCCCCCceEEEEecchhh----HHHhcCCHHHHHHHHHHHHHHhC-CCCCCCcEEE-E---ccCCC
Q 016772 228 CSYF-------LNLHKATGHCVLVYMPAGQLA----RDIEKMSDEAAANFAFTQLKKIL-PDASSPIQYL-V---SHWGT 291 (383)
Q Consensus 228 ~~~~-------~~~~~~~g~~~l~~~~~g~~a----~~~~~~~~ee~~~~v~~~L~~~~-~~~~~~~~~~-~---~~W~~ 291 (383)
...+ +....|+|+.++.+++..+.. ..|.. ..+++.+++++.|++.+ |++.+.+... + .+|.+
T Consensus 348 ~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~ 426 (501)
T 4dgk_A 348 FSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTANLDWTV-EGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRD 426 (501)
T ss_dssp EEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSCCCHHH-HHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC-
T ss_pred CceecccCCCCCCCcCCCCCceEEEEEecCccccccccHHH-HHHHHHHHHHHHHHHhhCCChHHceEEEEECCHHHHHH
Confidence 1111 122346777777665543211 11222 24678889999998755 6533322221 1 14544
Q ss_pred CCCC-CCcCCCCCC--CCChHHHHH-HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 292 DANS-LGSYSYDTV--GKSHDLYER-LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 292 ~~~~-~g~y~~~~~--g~~~~~~~~-~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
.... .|+.....+ .+....++. ..+|++|||+||++|++ +++|+||+.||+.||+.|+++|.
T Consensus 427 ~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~p--G~Gv~ga~~SG~~aA~~il~dL~ 492 (501)
T 4dgk_A 427 QLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTHP--GAGIPGVIGSAKATAGLMLEDLI 492 (501)
T ss_dssp -----------------------------CCTTEEECCCH--------HHHHHHHHHHHHHHHHHHHC
T ss_pred HcCCCCccccChhcchhhccccCCCCCCCCCCCEEEECCCCCC--cccHHHHHHHHHHHHHHHHHHhc
Confidence 3221 233211111 111112333 34789999999999998 46899999999999999999885
No 23
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.82 E-value=6.4e-19 Score=163.80 Aligned_cols=221 Identities=13% Similarity=0.112 Sum_probs=163.8
Q ss_pred ceeccCChHHHHHHHHccCCcccCceeEEEEecCCeeEEEECCCcEEE-cCEEEEecChHHHhcCCcccCCCCcHHHHHH
Q 016772 113 HGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFV-ADAVVVAVPLGVLKARTIKFEPRLPDWKEAA 191 (383)
Q Consensus 113 ~~~~~gG~~~l~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~-ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~a 191 (383)
.+....|++.|.++|+++++|+++++|++|..++++|.|++.+|+... ||+||+|+|...+.+. +.+. | .....
T Consensus 102 ~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~-~~~~---~-~l~~~ 176 (336)
T 1yvv_A 102 RWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTL-LAAA---P-KLASV 176 (336)
T ss_dssp EEEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGGG-GTTC---H-HHHHH
T ss_pred cEEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHh-hccC---H-HHHHH
Confidence 344567999999999999999999999999999999999999997664 9999999999987653 2232 2 34577
Q ss_pred HhhcCCcccceEEEEcCCCCCCCCCcceeecCCCCceeEeeeccCCC--CC-ceEEEEecchhhHHHhcCCHHHHHHHHH
Q 016772 192 IDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHKAT--GH-CVLVYMPAGQLARDIEKMSDEAAANFAF 268 (383)
Q Consensus 192 i~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~~~--g~-~~l~~~~~g~~a~~~~~~~~ee~~~~v~ 268 (383)
+..+.|++..++.+.|++++|.....+ ..+.......+.+...|. +. ..++.+..++++..+..++++++.+.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~ 254 (336)
T 1yvv_A 177 VAGVKMDPTWAVALAFETPLQTPMQGC--FVQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLH 254 (336)
T ss_dssp HTTCCEEEEEEEEEEESSCCSCCCCEE--EECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHH
T ss_pred HhhcCccceeEEEEEecCCCCCCCCeE--EeCCCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHH
Confidence 889999999999999999988543322 222222222333332232 22 3566666677777888899999999999
Q ss_pred HHHHHhCCC-CCCCcEEEEccCCCCCCCCCcCCCCCCCCChHHHHHHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHH
Q 016772 269 TQLKKILPD-ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAA 347 (383)
Q Consensus 269 ~~L~~~~~~-~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA 347 (383)
+.|.+++|. .+.|......+|. |+.+.|..... .+..+.++|+||||+++. +++++|+.||.++|
T Consensus 255 ~~l~~~lg~~~~~p~~~~~~rw~---~a~~~~~~~~~--------~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~lA 320 (336)
T 1yvv_A 255 GAFAELIDCTMPAPVFSLAHRWL---YARPAGAHEWG--------ALSDADLGIYVCGDWCLS---GRVEGAWLSGQEAA 320 (336)
T ss_dssp HHHHTTCSSCCCCCSEEEEEEEE---EEEESSCCCCS--------CEEETTTTEEECCGGGTT---SSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCcEEEccccC---ccCCCCCCCCC--------eeecCCCCEEEEecCCCC---CCHHHHHHHHHHHH
Confidence 999999985 4567777888995 34444432111 112345799999999976 59999999999999
Q ss_pred HHHHHHH
Q 016772 348 EDCRMRV 354 (383)
Q Consensus 348 ~~i~~~l 354 (383)
+.|.+.+
T Consensus 321 ~~l~~~~ 327 (336)
T 1yvv_A 321 RRLLEHL 327 (336)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9987764
No 24
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.82 E-value=8.1e-19 Score=168.46 Aligned_cols=262 Identities=15% Similarity=0.034 Sum_probs=171.2
Q ss_pred CCCcHHHHHHHH-HccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhcccc---ccccCCCceeccCChHHHHHH
Q 016772 52 EDMSIQRAISIV-FDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDK---EELLPGGHGLMVRGYLPVINT 126 (383)
Q Consensus 52 ~d~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~~---~~~~~g~~~~~~gG~~~l~~~ 126 (383)
.+.|+.+++.+. + +.+.++.++.+ ..++++.++.++|+..+.. .....++.+++.||++.|+++
T Consensus 126 ~~~s~~~~l~~~g~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gG~~~l~~~ 194 (421)
T 3nrn_A 126 EEIPADEWIKEKIG-----------ENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRWGGPGLIRGGCKAVIDE 194 (421)
T ss_dssp CCSBHHHHHHHHTC-----------CCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTCHHHHHHH
T ss_pred CCCCHHHHHHHhcC-----------CcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhcCCcceecCCHHHHHHH
Confidence 358899998764 3 22333333443 4566899999999865431 111234567899999999999
Q ss_pred HHc-----cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhcCCcccc
Q 016772 127 LAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIEN 201 (383)
Q Consensus 127 L~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~ 201 (383)
|++ +.+|++|++|++|..++++| | +.+|++++||+||+|+|+..+.++ +. .+.+|+...+.++++.+++..
T Consensus 195 l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~l-l~-~~~~~~~~~~~~~~~~~~~~~ 270 (421)
T 3nrn_A 195 LERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKL-IG-RDYFDRDYLKQVDSIEPSEGI 270 (421)
T ss_dssp HHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHH-HC-GGGSCHHHHHHHHTCCCCCEE
T ss_pred HHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHh-cC-cccCCHHHHHHHhCCCCCceE
Confidence 987 35799999999999988888 6 456778999999999999988752 11 135777777889999999889
Q ss_pred eEEEEcCCCCCCCCCcceee-cCCCCce-eEe----eeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhC
Q 016772 202 KIIMHFDKVFWPNVEFLGVV-SDTSYGC-SYF----LNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKIL 275 (383)
Q Consensus 202 kv~l~~~~~~w~~~~~~g~~-~~~~~~~-~~~----~~~~~~~g~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~~ 275 (383)
++++.++++.... .+.+ .++.... ..+ +....|+|+.++.+....+ ..++++..+.++++|++++
T Consensus 271 ~v~l~~~~~~~~~---~~~~~~~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~~~~------~~~~~~~~~~~~~~L~~~~ 341 (421)
T 3nrn_A 271 KFNLAVPGEPRIG---NTIVFTPGLMINGFNEPSALDKSLAREGYTLIMAHMALK------NGNVKKAIEKGWEELLEIF 341 (421)
T ss_dssp EEEEEEESSCSSC---SSEEECTTSSSCEEECGGGTCGGGSCTTEEEEEEEEECT------TCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEEcCCcccC---CeEEEcCCcceeeEeccCCCCCCcCCCCceEEEEEEeec------cccHHHHHHHHHHHHHHHc
Confidence 9999999875432 2222 2221110 111 1122355665555543321 2233456899999999999
Q ss_pred CCCCCCcEEEEccCCCCCCCCCcCCCCCCCCChHHHHHHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHH
Q 016772 276 PDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDC 350 (383)
Q Consensus 276 ~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i 350 (383)
| .. ....+.+|.. ..+.|. ..++. ..+ .+| +|||+||+++.+.++.+|+||+.||++||+.|
T Consensus 342 p-~~--~~~~~~~~~~---~~p~~~-~~~~~---~~~--~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 342 P-EG--EPLLAQVYRD---GNPVNR-TRAGL---HIE--WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp T-TC--EEEEEEEC--------------------CCC--CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred C-CC--eEEEeeeccC---CCCccc-ccCCC---CCC--CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 8 22 3334566743 222221 11111 112 567 89999999999854446799999999999987
No 25
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.79 E-value=2.6e-19 Score=150.76 Aligned_cols=116 Identities=19% Similarity=0.194 Sum_probs=101.8
Q ss_pred CCC-ceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhCCC-CCCCc-EE--EEccCCCCCCCCCcCCCCCCCCChHHHH
Q 016772 238 TGH-CVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD-ASSPI-QY--LVSHWGTDANSLGSYSYDTVGKSHDLYE 312 (383)
Q Consensus 238 ~g~-~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~~~~-~~~~~-~~--~~~~W~~~~~~~g~y~~~~~g~~~~~~~ 312 (383)
++. .+|++|+.++.+..+..++++++++.++++|+++|+. . .+. .+ ..++|.+|||++|+|++..+|......+
T Consensus 33 ~g~~~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~ 111 (181)
T 2e1m_C 33 TQGGVVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRRI-EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHL 111 (181)
T ss_dssp CSCEEEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGGG-GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHH
T ss_pred CCCCEEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCCc-HhhccCcceecccCCCCCCCCcccCcCCCchHHHHH
Confidence 344 4788899999899999999999999999999999964 4 555 56 8899999999999999888887656678
Q ss_pred HHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 313 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 313 ~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
.+.+|.++||||||+|+. +.|+||||++||++||++|++.+.
T Consensus 112 ~l~~p~grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~ 153 (181)
T 2e1m_C 112 DVVRPEGPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPV 153 (181)
T ss_dssp HHHSCBTTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC
T ss_pred HHhCCCCcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999996 889999999999999999987653
No 26
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.75 E-value=2e-17 Score=158.84 Aligned_cols=266 Identities=13% Similarity=0.072 Sum_probs=162.1
Q ss_pred CCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhccccccc-------cCCCceeccCChHHHH
Q 016772 53 DMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKEEL-------LPGGHGLMVRGYLPVI 124 (383)
Q Consensus 53 d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~~~~~-------~~g~~~~~~gG~~~l~ 124 (383)
++|+.+|+++.. .. .+.+.+..+ +...|+ ++.++|+.++..+.. ..++.+.+.+|+++++
T Consensus 142 ~~s~~~~l~~~~----------~~-~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~ 209 (424)
T 2b9w_A 142 MLPFDEFLALNG----------CE-AARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQAMF 209 (424)
T ss_dssp GSBHHHHHHHTT----------CG-GGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHHHHH
T ss_pred ccCHHHHHHhhC----------cH-HHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHHHHH
Confidence 578898887632 11 233344444 344454 678888766432111 1345668899999999
Q ss_pred HHHHccC--CcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhcCCcccce
Q 016772 125 NTLAKGL--DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENK 202 (383)
Q Consensus 125 ~~L~~~l--~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~k 202 (383)
++|++.+ +|++|++|++|..++++|.|++.+|+ ++||+||+|+|+..+.. +.|++|+.+ +.+.++.+..+.
T Consensus 210 ~~l~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~~~----~l~~~~~~~-~~~~~~~~~~~~- 282 (424)
T 2b9w_A 210 EHLNATLEHPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKFLD----YSDADDDER-EYFSKIIHQQYM- 282 (424)
T ss_dssp HHHHHHSSSCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHHTT----SBCCCHHHH-HHHTTCEEEEEE-
T ss_pred HHHHHhhcceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHHhh----ccCCCHHHH-HHHhcCCcceeE-
Confidence 9999977 69999999999998888999998885 89999999999998743 235555554 356777765543
Q ss_pred EEEEcCCCCCCCCCcceeecCC--C--Cc-eeEeeeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhCCC
Q 016772 203 IIMHFDKVFWPNVEFLGVVSDT--S--YG-CSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD 277 (383)
Q Consensus 203 v~l~~~~~~w~~~~~~g~~~~~--~--~~-~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L~~~~~~ 277 (383)
+.+.+...++ .+.++.+.. . .. ..+.....+.+...++++|+.+.. ..+...+++++++.++++|.+ ++.
T Consensus 283 ~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~v~~~l~~-l~~ 357 (424)
T 2b9w_A 283 VDACLVKEYP---TISGYVPDNMRPERLGHVMVYYHRWADDPHQIITTYLLRNH-PDYADKTQEECRQMVLDDMET-FGH 357 (424)
T ss_dssp EEEEEESSCC---SSEEECGGGGSGGGTTSCCEEEECCTTCTTSCEEEEEECCB-TTBCCCCHHHHHHHHHHHHHH-TTC
T ss_pred EEEEEeccCC---cccccccCCCCCcCCCcceEEeeecCCCCceEEEEEeccCC-CcccccChHHHHHHHHHHHHH-cCC
Confidence 2222222332 122333221 0 11 111122222222356777776533 455677889999999999998 442
Q ss_pred CCCCcEEEEccCCCCCCC-CCcCCCCCCCCChHHHHHHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHH
Q 016772 278 ASSPIQYLVSHWGTDANS-LGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 351 (383)
Q Consensus 278 ~~~~~~~~~~~W~~~~~~-~g~y~~~~~g~~~~~~~~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~ 351 (383)
..+..+...+|...|.. ...| ..|. ..+..-.++.+|+||||++++. |++|+|+.||.+||++|+
T Consensus 358 -~~~~~~~~~~w~~~p~~~~~~~---~~G~--~~~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 358 -PVEKIIEEQTWYYFPHVSSEDY---KAGW--YEKVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp -CEEEEEEEEEEEEEEECCHHHH---HTTH--HHHHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred -cccccccccceeeeeccCHHHH---hccH--HHHHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 11111223466432210 0000 1111 1111223456799999999874 789999999999999875
No 27
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.48 E-value=8.8e-16 Score=120.29 Aligned_cols=107 Identities=18% Similarity=0.225 Sum_probs=68.7
Q ss_pred cEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhcCCcccceEEEEcCCCCCCCCCcceeecCCCCceeEeeeccC
Q 016772 157 KTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHK 236 (383)
Q Consensus 157 ~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~ 236 (383)
++++||+||||+|+++|+ .|.|.|+||+.+.+++++++||...|+++.|+++||++.+..|. +...
T Consensus 4 ~~~~Ad~VIvTvP~~vL~--~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~~gd------------~s~~ 69 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLR--FVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEADWK------------RELD 69 (130)
T ss_dssp EEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHHHHH------------HHHH
T ss_pred eEEEcCEEEEcCCHHHHh--cCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCcccc------------ccCC
Confidence 468999999999999998 68999999999999999999999999999999999976433221 1111
Q ss_pred CCCCceEEEEe-cchhhHHHhcCCHHHHHHHHHHHHHHhCCCC
Q 016772 237 ATGHCVLVYMP-AGQLARDIEKMSDEAAANFAFTQLKKILPDA 278 (383)
Q Consensus 237 ~~g~~~l~~~~-~g~~a~~~~~~~~ee~~~~v~~~L~~~~~~~ 278 (383)
+.+.+++++|+ +|+.+.+|..+++ +-++.++..|.+++|+.
T Consensus 70 ~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~ 111 (130)
T 2e1m_B 70 AIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSV 111 (130)
T ss_dssp HHSTTHHHHHHHHCCCSCCCC----------------------
T ss_pred CCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCC
Confidence 11234777888 4888888888875 67788899999999874
No 28
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.44 E-value=1.1e-13 Score=131.55 Aligned_cols=127 Identities=13% Similarity=0.110 Sum_probs=90.1
Q ss_pred CCCCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhccc--c-ccc-----cCCCc-eeccCCh
Q 016772 51 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWD--K-EEL-----LPGGH-GLMVRGY 120 (383)
Q Consensus 51 ~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~--~-~~~-----~~g~~-~~~~gG~ 120 (383)
..+.|+.+++.+ .+++.+++.++.+ ..++|+.+++++|+..+. . ... +.... .+++||+
T Consensus 136 ~~~~s~~e~l~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~ 204 (399)
T 1v0j_A 136 ADAQNLEEKAIS-----------LIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGY 204 (399)
T ss_dssp TC----CCHHHH-----------HHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHH
T ss_pred CCcccHHHHHHH-----------HHhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccH
Confidence 356788888876 3566777777776 678999999999987752 1 111 11112 2789999
Q ss_pred HHHHHHHHccC--CcccCceeEEEEecCCeeEEEECCCcEE-EcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhcCC
Q 016772 121 LPVINTLAKGL--DIRLGHRVTKITRHYIGVKVTVEGGKTF-VADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGV 197 (383)
Q Consensus 121 ~~l~~~L~~~l--~I~l~~~V~~I~~~~~~v~V~~~~G~~~-~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~ 197 (383)
++|+++|++.+ +|++|++|++|... | + .+ +||+||+|+|++.+... .+..+.|
T Consensus 205 ~~l~~~l~~~~g~~I~l~~~V~~I~~~---v-----~--~~~~aD~VI~t~p~~~l~~~--------------~l~~l~y 260 (399)
T 1v0j_A 205 TAWLQNMAADHRIEVRLNTDWFDVRGQ---L-----R--PGSPAAPVVYTGPLDRYFDY--------------AEGRLGW 260 (399)
T ss_dssp HHHHHHHTCSTTEEEECSCCHHHHHHH---H-----T--TTSTTCCEEECSCHHHHTTT--------------TTCCCCE
T ss_pred HHHHHHHHhcCCeEEEECCchhhhhhh---h-----h--hcccCCEEEECCcHHHHHhh--------------hhCCCCc
Confidence 99999999865 69999999999743 3 1 24 69999999999997632 2456788
Q ss_pred cccceEEEEcCCCCC
Q 016772 198 GIENKIIMHFDKVFW 212 (383)
Q Consensus 198 ~~~~kv~l~~~~~~w 212 (383)
.++..+.+.++.+.+
T Consensus 261 ~s~~~~~~~~~~~~~ 275 (399)
T 1v0j_A 261 RTLDFEVEVLPIGDF 275 (399)
T ss_dssp EEEEEEEEEESSSCS
T ss_pred ceEEEEEEEEccccC
Confidence 887778888877643
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.34 E-value=3.1e-12 Score=120.19 Aligned_cols=126 Identities=13% Similarity=0.137 Sum_probs=95.6
Q ss_pred CCCCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhcccc--ccc------cCCCc-eeccCCh
Q 016772 51 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDK--EEL------LPGGH-GLMVRGY 120 (383)
Q Consensus 51 ~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~~--~~~------~~g~~-~~~~gG~ 120 (383)
..+.|+.+++.+ .+++++.+.++.+ +.++|+.+++++|+..+.. ... +.+.. .+++||+
T Consensus 126 ~~~~s~~~~~~~-----------~~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~ 194 (367)
T 1i8t_A 126 KVPENLEEQAIS-----------LVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGY 194 (367)
T ss_dssp CCCCSHHHHHHH-----------HHHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCH
T ss_pred CCCccHHHHHHH-----------HHhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCH
Confidence 357899999876 4677888888877 7889999999999876521 111 12222 2889999
Q ss_pred HHHHHHHHccCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhcCCccc
Q 016772 121 LPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIE 200 (383)
Q Consensus 121 ~~l~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~ 200 (383)
++|+++|+++++|++|++|++|.. +| ...||+||+|+|+..+... .+..+.|.+.
T Consensus 195 ~~l~~~l~~g~~i~l~~~V~~i~~---~v--------~~~~D~VV~a~p~~~~~~~--------------~l~~l~y~s~ 249 (367)
T 1i8t_A 195 TKLIEKMLEGVDVKLGIDFLKDKD---SL--------ASKAHRIIYTGPIDQYFDY--------------RFGALEYRSL 249 (367)
T ss_dssp HHHHHHHHTTSEEECSCCGGGSHH---HH--------HTTEEEEEECSCHHHHTTT--------------TTCCCCEEEE
T ss_pred HHHHHHHhcCCEEEeCCceeeech---hh--------hccCCEEEEeccHHHHHHH--------------hhCCCCCceE
Confidence 999999999889999999998863 22 1458999999999987532 2456788888
Q ss_pred ceEEEEcCCCCC
Q 016772 201 NKIIMHFDKVFW 212 (383)
Q Consensus 201 ~kv~l~~~~~~w 212 (383)
..+.+.++.+..
T Consensus 250 ~~v~~~~d~~~~ 261 (367)
T 1i8t_A 250 KFETERHEFPNF 261 (367)
T ss_dssp EEEEEEESSSCS
T ss_pred EEEEEEeccccC
Confidence 878888887643
No 30
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.27 E-value=4e-11 Score=113.24 Aligned_cols=118 Identities=9% Similarity=0.147 Sum_probs=89.4
Q ss_pred CCCCcHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCCccChhccc--c------ccccCCCc-eeccCCh
Q 016772 51 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWD--K------EELLPGGH-GLMVRGY 120 (383)
Q Consensus 51 ~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S~~~~~--~------~~~~~g~~-~~~~gG~ 120 (383)
..+.|+.+++.+ .+++.+++.++.+ ..++|+.+++++|+..+. . ...+.+.. .+++||+
T Consensus 130 ~~~~sl~e~~~~-----------~~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~ 198 (384)
T 2bi7_A 130 ADPQTFEEEALR-----------FIGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGY 198 (384)
T ss_dssp SSCCBHHHHHHH-----------HHCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHH
T ss_pred CCCcCHHHHHHH-----------hhcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCH
Confidence 357899999876 3567788888776 788999999999987652 0 01122222 2899999
Q ss_pred HHHHHHHHcc--CCcccCceeE-EEEecCCeeEEEECCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhcCC
Q 016772 121 LPVINTLAKG--LDIRLGHRVT-KITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGV 197 (383)
Q Consensus 121 ~~l~~~L~~~--l~I~l~~~V~-~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~ 197 (383)
++|+++|++. .+|++|++|+ +|.. .||+||+|+|+..+... .+..+.|
T Consensus 199 ~~l~~~l~~~~g~~I~l~~~V~~~i~~---------------~~d~VI~a~p~~~~~~~--------------~lg~l~y 249 (384)
T 2bi7_A 199 TQMIKSILNHENIKVDLQREFIVEERT---------------HYDHVFYSGPLDAFYGY--------------QYGRLGY 249 (384)
T ss_dssp HHHHHHHHCSTTEEEEESCCCCGGGGG---------------GSSEEEECSCHHHHTTT--------------TTCCCCE
T ss_pred HHHHHHHHhcCCCEEEECCeeehhhhc---------------cCCEEEEcCCHHHHHHh--------------hcCCCCc
Confidence 9999999984 4799999999 8853 29999999999997642 1446788
Q ss_pred cccceEEEEcC
Q 016772 198 GIENKIIMHFD 208 (383)
Q Consensus 198 ~~~~kv~l~~~ 208 (383)
.+...+.+.++
T Consensus 250 ~s~~~v~~~~d 260 (384)
T 2bi7_A 250 RTLDFKKFTYQ 260 (384)
T ss_dssp EEEEEEEEEEE
T ss_pred ceEEEEEEEeC
Confidence 88777788876
No 31
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.14 E-value=1.1e-09 Score=103.33 Aligned_cols=165 Identities=10% Similarity=0.079 Sum_probs=110.6
Q ss_pred cCCceeEEcCCCCccCHHHHHHHHHHHH-----H-HHHHHHHHHhhCCCCCcHHHHHHHHHccCchhhhhhHHHHHHHHH
Q 016772 10 SFCSYALFDMDGNQVPQELVTKVGEAFE-----S-ILKETDKVREEHDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWY 83 (383)
Q Consensus 10 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 83 (383)
....+++++++..++|..... +..++. . ..............++|+.+|+.+ .+++++++.+
T Consensus 108 ~~~~~~~~~g~l~~lP~~~~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~s~~e~~~~-----------~~G~~~~e~~ 175 (397)
T 3hdq_A 108 QHRVLASVDGQLLPIPINLDT-VNRLYGLNLTSFQVEEFFASVAEKVEQVRTSEDVVVS-----------KVGRDLYNKF 175 (397)
T ss_dssp CCBEEEEETTEEEEESCCHHH-HHHHHTCCCCHHHHHHHHHHHCCCCSSCCBHHHHHHH-----------HHHHHHHHHH
T ss_pred cccceEEECCEEEEcCCChHH-HHHhhccCCCHHHHHHHHhhcccCCCCCcCHHHHHHH-----------hcCHHHHHHH
Confidence 345566777777777765421 111111 0 111111111223468899999986 5688899999
Q ss_pred HHh-hhhhcCCCCCccChhccccc--------cccCCCc-eeccCChHHHHHHHHc--cCCcccCceeEEEEecCCeeEE
Q 016772 84 LCR-MEGWFAADAETISLKSWDKE--------ELLPGGH-GLMVRGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKV 151 (383)
Q Consensus 84 ~~~-~~~~~~~~~~~~S~~~~~~~--------~~~~g~~-~~~~gG~~~l~~~L~~--~l~I~l~~~V~~I~~~~~~v~V 151 (383)
+.+ +.+.|+.+++++|+.++... ..+.+.. .+++||+++|+++|++ +++|++|++|+++
T Consensus 176 ~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~~~~g~~V~l~~~v~~~--------- 246 (397)
T 3hdq_A 176 FRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYTRMFQNMLSSPNIKVMLNTDYREI--------- 246 (397)
T ss_dssp THHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHHHHHHHHTCSTTEEEEESCCGGGT---------
T ss_pred HHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHHHHHHHHHhccCCEEEECCeEEec---------
Confidence 887 78999999999998754310 0112222 3689999999999998 4579999999833
Q ss_pred EECCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhcCCcccceEEEEcCCCCCC
Q 016772 152 TVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWP 213 (383)
Q Consensus 152 ~~~~G~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~ 213 (383)
+..+.+|+||+|+|++.+... ....+.|.+...+.+.++...+.
T Consensus 247 ----~~~~~~d~vI~T~P~d~~~~~--------------~~g~L~yrsl~~~~~~~~~~~~~ 290 (397)
T 3hdq_A 247 ----ADFIPFQHMIYTGPVDAFFDF--------------CYGKLPYRSLEFRHETHDTEQLL 290 (397)
T ss_dssp ----TTTSCEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSSCSC
T ss_pred ----cccccCCEEEEcCCHHHHHHH--------------hcCCCCCceEEEEEEEeccccCC
Confidence 334679999999999987421 24567888888888888876543
No 32
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.37 E-value=7.9e-06 Score=78.63 Aligned_cols=58 Identities=14% Similarity=-0.035 Sum_probs=48.7
Q ss_pred ceeccCChHHHHHHHHcc-----CCcccCceeEEEEec--CCeeE-EEECCCcEEEcCEEEEecChH
Q 016772 113 HGLMVRGYLPVINTLAKG-----LDIRLGHRVTKITRH--YIGVK-VTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 113 ~~~~~gG~~~l~~~L~~~-----l~I~l~~~V~~I~~~--~~~v~-V~~~~G~~~~ad~VI~t~p~~ 171 (383)
..+++||++.|+++|++. .+|++|++|++|..+ ++++. |++ +|+++.||+||+|+++.
T Consensus 234 ~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 234 YLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp EEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred eEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 448999999999999863 469999999999987 77754 666 57789999999999875
No 33
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.13 E-value=7.4e-06 Score=78.69 Aligned_cols=60 Identities=13% Similarity=0.107 Sum_probs=50.3
Q ss_pred CCceeccCChHHHHHHHHc-----cCCcccCceeEEEEe-cCCee-EEEECCCcEEEcCEEEEecCh
Q 016772 111 GGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITR-HYIGV-KVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 111 g~~~~~~gG~~~l~~~L~~-----~l~I~l~~~V~~I~~-~~~~v-~V~~~~G~~~~ad~VI~t~p~ 170 (383)
.+..+++||++.|+++|++ +.+|+++++|++|.. +++++ .|++.+|+++.||+||++...
T Consensus 246 s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~ 312 (475)
T 3p1w_A 246 SPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSY 312 (475)
T ss_dssp CSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGG
T ss_pred CceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCc
Confidence 4567899999999999976 457999999999998 66665 488889988999999999865
No 34
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.09 E-value=6.7e-06 Score=78.63 Aligned_cols=60 Identities=13% Similarity=0.003 Sum_probs=51.0
Q ss_pred ceeccCChHHHHHHHHc-----cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHH
Q 016772 113 HGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 113 ~~~~~gG~~~l~~~L~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
..++.||++.|+++|++ +.+|++|++|++|..+++++.+...+|+++.||+||+|+++..
T Consensus 226 ~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 226 YLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp EEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred EEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 56899999999999986 4579999999999998888774335788899999999998863
No 35
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.94 E-value=0.00083 Score=58.66 Aligned_cols=219 Identities=13% Similarity=0.100 Sum_probs=110.0
Q ss_pred ccCChHHHHHHHHccCCcccCceeEEEEecCCeeEEEECCCcE-EEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhh
Q 016772 116 MVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKT-FVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDD 194 (383)
Q Consensus 116 ~~gG~~~l~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~~G~~-~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~ 194 (383)
...+.............+.............+...+....+.. .....++.+......... . . ...........
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~~~~~~~ 179 (336)
T 3kkj_A 105 GKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTL-L---A-AAPKLASVVAG 179 (336)
T ss_dssp ESSSTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESCEEECSCHHHHGGG-G---T-TCHHHHHHHTT
T ss_pred cccccccchhcccccceeecceeecccccccccccccccccccccccccceeccccchhhhh-h---c-ccccccccccc
Confidence 4455666666666666677777777777766666666655533 344455555554443211 1 1 11111222222
Q ss_pred cCCcccceEEEEcCCCCCCCCCcceeecCCCCceeEeeeccC--C-CCCceEEEEecchhhHHHhcCCHHHHHHHHHHHH
Q 016772 195 LGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHK--A-TGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQL 271 (383)
Q Consensus 195 ~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~--~-~g~~~l~~~~~g~~a~~~~~~~~ee~~~~v~~~L 271 (383)
............+....+....... ............... . ........................+..+.....+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (336)
T 3kkj_A 180 VKMDPTWAVALAFETPLQTPMQGCF--VQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAF 257 (336)
T ss_dssp CCEEEEEEEEEEESSCCSCCCCEEE--ECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred cccccchhhhhcccccccccccccc--ccccccccccccccccccccccccceeccccccccccccccchhhhhhhhhhh
Confidence 2233333333444333322111110 111111111111111 1 1111222222223333344455666677777777
Q ss_pred HHhCCC-CCCCcEEEEccCCCCCCCCCcCCCCCCCCChHHHHHHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHH
Q 016772 272 KKILPD-ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDC 350 (383)
Q Consensus 272 ~~~~~~-~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i 350 (383)
....+. ...+.....++|. |+.+...... .. ...+.+|||+|||++.+ +++++|+.||+.||+.|
T Consensus 258 ~~~~~~~~~~~~~~~~~~w~---~a~~~~~~~~-~~-------~~~~~~~v~l~GDa~~g---~gv~~A~~sG~~aA~~I 323 (336)
T 3kkj_A 258 AELIDCTMPAPVFSLAHRWL---YARPAGAHEW-GA-------LSDADLGIYVCGDWCLS---GRVEGAWLSGQEAARRL 323 (336)
T ss_dssp HTTCSSCCCCCSEEEEEEEE---EEEESSCCCC-SS-------EEETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHH
T ss_pred hhhccCCcCcchheecccee---ecccccccCc-cc-------eeeCCCCEEEEecccCC---cCHHHHHHHHHHHHHHH
Confidence 776654 5667777778883 3322221111 11 12345699999999875 57999999999999999
Q ss_pred HHHHH
Q 016772 351 RMRVL 355 (383)
Q Consensus 351 ~~~l~ 355 (383)
++.|.
T Consensus 324 ~~~L~ 328 (336)
T 3kkj_A 324 LEHLQ 328 (336)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 98874
No 36
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.50 E-value=0.0002 Score=71.13 Aligned_cols=86 Identities=12% Similarity=0.057 Sum_probs=63.7
Q ss_pred CCceeccCChHHHHHHHHc-----cCCcccCceeEEEEecC--CeeE-EEECCCcEEEcCEEEEecChHHHhcCCcccCC
Q 016772 111 GGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRHY--IGVK-VTVEGGKTFVADAVVVAVPLGVLKARTIKFEP 182 (383)
Q Consensus 111 g~~~~~~gG~~~l~~~L~~-----~l~I~l~~~V~~I~~~~--~~v~-V~~~~G~~~~ad~VI~t~p~~~l~~~~i~f~p 182 (383)
++..++.||++.|+++|++ +..|+++++|++|..++ ++++ |++.+|+++.||+||++. ..+ |
T Consensus 368 sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~--~~l--------p 437 (650)
T 1vg0_A 368 TPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED--SYL--------S 437 (650)
T ss_dssp SSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG--GGB--------C
T ss_pred CceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh--hhc--------C
Confidence 4678899999999999976 44799999999999877 5665 556789999999999833 222 2
Q ss_pred CCcHHHHHHHhhcCCcccceEEEEcCCCCC
Q 016772 183 RLPDWKEAAIDDLGVGIENKIIMHFDKVFW 212 (383)
Q Consensus 183 ~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w 212 (383)
.. . ..++.++.+.++.+.++++.-
T Consensus 438 ~~---~---~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 438 EN---T---CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp TT---T---TTTCCCEEEEEEEEEESSCSS
T ss_pred Hh---H---hccccccceEEEEEEecCCCC
Confidence 11 1 123356778888888888754
No 37
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.21 E-value=0.00043 Score=64.45 Aligned_cols=59 Identities=20% Similarity=0.084 Sum_probs=39.4
Q ss_pred CCceeccCChHHHHHHHHccC--CcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecC
Q 016772 111 GGHGLMVRGYLPVINTLAKGL--DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVP 169 (383)
Q Consensus 111 g~~~~~~gG~~~l~~~L~~~l--~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p 169 (383)
...+.+.||+++|+++|++.+ +|++|++|++|...+++|.|.+.+......-+|++.+.
T Consensus 310 ~~~~~i~GG~~~l~~~l~~~l~~~i~l~~~V~~I~~~~~gv~v~~~~~~~~~g~~~~~~~~ 370 (376)
T 2e1m_A 310 ATYWEIEGGSRMLPETLAKDLRDQIVMGQRMVRLEYYDPGRDGHHGELTGPGGPAVAIQTV 370 (376)
T ss_dssp CCEEEETTCTTHHHHHHHHHGGGTEECSEEEEEEEECCCC-------------CCEEEEEE
T ss_pred CceEEECCcHHHHHHHHHHhcCCcEEecCeEEEEEECCCceEEEeCCCcCCCCCeeEEEec
Confidence 346789999999999999987 59999999999999888877665444456667776653
No 38
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.75 E-value=0.015 Score=56.84 Aligned_cols=42 Identities=29% Similarity=0.293 Sum_probs=35.6
Q ss_pred cCCcccCceeEEEEecCC----eeEEEECCC---cEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYI----GVKVTVEGG---KTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~----~v~V~~~~G---~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..+++ +|+|++.++ .+++||.||.|.-..
T Consensus 134 gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~ 182 (535)
T 3ihg_A 134 GGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNR 182 (535)
T ss_dssp TCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred CCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCc
Confidence 568999999999999888 888877765 679999999987553
No 39
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=95.37 E-value=0.023 Score=53.83 Aligned_cols=52 Identities=19% Similarity=0.263 Sum_probs=42.9
Q ss_pred HHHHHHHHc-----cCCcccCc---eeEEEEecCCeeE-EEECCCcEEEcCEEEEecChHH
Q 016772 121 LPVINTLAK-----GLDIRLGH---RVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 121 ~~l~~~L~~-----~l~I~l~~---~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
..++++|.+ +++|++++ +|++|..++++|. |++.+|+++.||+||+|+-...
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 445555543 56899999 9999999888888 9999998899999999998764
No 40
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=95.24 E-value=0.31 Score=48.05 Aligned_cols=42 Identities=31% Similarity=0.308 Sum_probs=33.6
Q ss_pred cCCcccCceeEEEEec-CCeeEEEEC-CC--cEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRH-YIGVKVTVE-GG--KTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~-~~~v~V~~~-~G--~~~~ad~VI~t~p~~ 171 (383)
+++|+.+++|++|..+ ++.+.|++. +| .+++||.||.|.-..
T Consensus 142 Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~ 187 (591)
T 3i3l_A 142 GITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSG 187 (591)
T ss_dssp TCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGG
T ss_pred CCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCc
Confidence 5689999999999986 445667776 67 579999999998553
No 41
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=95.13 E-value=0.1 Score=50.64 Aligned_cols=42 Identities=21% Similarity=0.127 Sum_probs=34.0
Q ss_pred cCCcccCceeEEEEecCCee---EEEECCCc--EEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGV---KVTVEGGK--TFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v---~V~~~~G~--~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..+++++ .+.+.+|+ +++||.||.|.-..
T Consensus 125 Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 125 GVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNR 171 (512)
T ss_dssp TCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTT
T ss_pred CCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcc
Confidence 57899999999999988764 45556674 79999999998664
No 42
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=95.12 E-value=0.02 Score=52.84 Aligned_cols=51 Identities=16% Similarity=0.104 Sum_probs=41.6
Q ss_pred HHHHHHHHc-----cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHH
Q 016772 121 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 121 ~~l~~~L~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
..++++|.+ +++|+++++|++|..+++++.|++.+| ++.||+||+|+-...
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 445555543 568999999999999888898999888 799999999987753
No 43
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=95.10 E-value=0.65 Score=45.55 Aligned_cols=41 Identities=32% Similarity=0.290 Sum_probs=35.5
Q ss_pred cCCcccCceeEEEEecCCeeEEEE--CCC-cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTV--EGG-KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~--~~G-~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..++++|+|++ .+| ++++||.||.|.-.
T Consensus 162 gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 162 GAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGG 205 (570)
T ss_dssp TEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCS
T ss_pred CCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCC
Confidence 567999999999999988888877 678 68999999998754
No 44
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=94.91 E-value=0.44 Score=44.44 Aligned_cols=42 Identities=21% Similarity=0.226 Sum_probs=34.9
Q ss_pred cCCcccCceeEEEEecCCee--EEEECCCc--EEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGV--KVTVEGGK--TFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v--~V~~~~G~--~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..+++++ .|++.+|+ +++||.||.|.-..
T Consensus 120 gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 120 GVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 67899999999999887774 46678887 69999999998543
No 45
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.87 E-value=0.035 Score=55.89 Aligned_cols=52 Identities=15% Similarity=0.173 Sum_probs=43.1
Q ss_pred HHHHHHHHc-----cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHH
Q 016772 121 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 121 ~~l~~~L~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
..++++|.+ +++|+++++|++|..++++|.|++.+|.++.||+||+|+-...
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 445555543 6789999999999999999999998887899999999997763
No 46
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=94.60 E-value=0.061 Score=50.73 Aligned_cols=54 Identities=28% Similarity=0.356 Sum_probs=43.8
Q ss_pred ccCChHHHHHHHHc-----cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 116 MVRGYLPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 116 ~~gG~~~l~~~L~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+......+.+.|.+ +++|+++++|++|..+++++.|++.+| +++||+||+|+-.
T Consensus 127 ~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~ 185 (417)
T 3v76_A 127 CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGG 185 (417)
T ss_dssp ESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCC
T ss_pred eCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCC
Confidence 34445566666654 568999999999999888899999888 8999999999854
No 47
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=94.52 E-value=0.05 Score=49.82 Aligned_cols=52 Identities=12% Similarity=0.125 Sum_probs=40.9
Q ss_pred HHHHHHHHc-----cCCcccCceeEEEEecCCe-eEEEECCC--cEEEcCEEEEecChHH
Q 016772 121 LPVINTLAK-----GLDIRLGHRVTKITRHYIG-VKVTVEGG--KTFVADAVVVAVPLGV 172 (383)
Q Consensus 121 ~~l~~~L~~-----~l~I~l~~~V~~I~~~~~~-v~V~~~~G--~~~~ad~VI~t~p~~~ 172 (383)
..+.++|.+ +++|+++++|++|..++++ +.|++.+| .+++||+||+|+-...
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 345555543 5689999999999998776 88888888 4799999999997653
No 48
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.38 E-value=0.043 Score=55.37 Aligned_cols=51 Identities=14% Similarity=0.166 Sum_probs=41.7
Q ss_pred HHHHHHHHc-----cCCcccCceeEEEEecCCeeEEEECCCc-EEEcCEEEEecChH
Q 016772 121 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGK-TFVADAVVVAVPLG 171 (383)
Q Consensus 121 ~~l~~~L~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~G~-~~~ad~VI~t~p~~ 171 (383)
..++++|.+ +++|+++++|++|..++++|.|++.+|+ +++||+||+|+-..
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcc
Confidence 445555543 6789999999999999889999998886 79999999999876
No 49
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=94.00 E-value=0.067 Score=50.03 Aligned_cols=41 Identities=24% Similarity=0.291 Sum_probs=37.3
Q ss_pred CCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChH
Q 016772 131 LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 131 l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
.+|+++++|++|..++++|.|++.+|++++||.||.|.-..
T Consensus 140 ~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 140 DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTT
T ss_pred CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcC
Confidence 57999999999999999999999999999999999987653
No 50
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.82 E-value=0.076 Score=48.80 Aligned_cols=42 Identities=24% Similarity=0.272 Sum_probs=36.9
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHH
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
+++|+.+++|++|..++++|.|++.+| +++||+||+|+....
T Consensus 163 G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 163 GCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp TCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred CCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence 568999999999999888888988888 599999999998764
No 51
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.70 E-value=0.087 Score=48.99 Aligned_cols=41 Identities=37% Similarity=0.464 Sum_probs=35.8
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..++++|.|++.+| +++||.||+|+-..
T Consensus 167 Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 167 GATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp TCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred CCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 578999999999999888888888777 79999999999654
No 52
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.66 E-value=0.093 Score=48.44 Aligned_cols=41 Identities=20% Similarity=0.088 Sum_probs=36.1
Q ss_pred cCCcccCceeEEEEecCCeeE-EEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..++++|. |++.+| +++||.||+|+-..
T Consensus 163 Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAW 204 (382)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGG
T ss_pred CCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchh
Confidence 568999999999999888887 888888 79999999999765
No 53
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=93.55 E-value=0.075 Score=49.51 Aligned_cols=42 Identities=17% Similarity=0.282 Sum_probs=37.1
Q ss_pred cCCcccCceeEEEEecCCee--EEEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGV--KVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v--~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..++++| .|++.+|++++||.||.|.-..
T Consensus 122 gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 122 TVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp TEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTT
T ss_pred CcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCC
Confidence 46799999999999988888 8999999889999999998653
No 54
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=93.44 E-value=0.11 Score=49.46 Aligned_cols=50 Identities=26% Similarity=0.337 Sum_probs=40.2
Q ss_pred hHHHHHHHHc-----cCCcccCceeEEEEecCCe-eEEEECCCcEEEcCEEEEecC
Q 016772 120 YLPVINTLAK-----GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVP 169 (383)
Q Consensus 120 ~~~l~~~L~~-----~l~I~l~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~t~p 169 (383)
...+.+.|.+ +++|+++++|++|..++++ +.|++.+|++++||.||+|+-
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtG 188 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVG 188 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCC
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCC
Confidence 3556666644 5679999999999987777 668888887799999999984
No 55
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=93.39 E-value=0.093 Score=42.77 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=34.4
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++ +|++|..+++++.|++.+| ++.||.||+|+-.
T Consensus 70 gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 70 GAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHK 108 (180)
T ss_dssp TCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTT
T ss_pred CCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCC
Confidence 5789999 9999998888888988888 8999999999864
No 56
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=93.34 E-value=0.13 Score=47.71 Aligned_cols=49 Identities=27% Similarity=0.393 Sum_probs=40.1
Q ss_pred HHHHHHHc-cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 122 PVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 122 ~l~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
.+.+.|.+ +++|+++++|++|..+++++.|++.+|+++.||.||+++..
T Consensus 192 ~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 192 AVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCC
Confidence 34444433 67899999999999887888888889988999999999865
No 57
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=93.29 E-value=0.13 Score=49.49 Aligned_cols=41 Identities=24% Similarity=0.326 Sum_probs=37.2
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++.|++.+|+++.||.||+++..
T Consensus 246 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 246 GISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp TCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred CCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCC
Confidence 57899999999999988888899999988999999999975
No 58
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=93.19 E-value=0.16 Score=47.27 Aligned_cols=52 Identities=13% Similarity=0.068 Sum_probs=43.1
Q ss_pred hHHHHHHHHc---cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChH
Q 016772 120 YLPVINTLAK---GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 120 ~~~l~~~L~~---~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
...+.+.|.+ +++|+++++|++|..++++|.|++.+|++++||.||.|.-..
T Consensus 98 ~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 98 YDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGA 152 (397)
T ss_dssp HHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcc
Confidence 3455555554 578999999999999988999999999889999999997654
No 59
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.16 E-value=0.1 Score=48.16 Aligned_cols=51 Identities=20% Similarity=0.249 Sum_probs=40.5
Q ss_pred HHHHHHHHc-----cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHH
Q 016772 121 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 121 ~~l~~~L~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
..+.++|.+ +++|+++++|++|..+++++.|++.+| .++||.||+|+-...
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 344455543 568999999999999888888888777 799999999997653
No 60
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.16 E-value=0.08 Score=48.85 Aligned_cols=50 Identities=24% Similarity=0.193 Sum_probs=40.2
Q ss_pred HHHHHHHHc-----cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChH
Q 016772 121 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 121 ~~l~~~L~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
..+.+.|.+ +++|+++++|++|..++++|.|++.+| ++.||.||+|+...
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChh
Confidence 345554443 567999999999998888888888877 79999999999764
No 61
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.09 E-value=0.13 Score=49.51 Aligned_cols=41 Identities=24% Similarity=0.367 Sum_probs=36.2
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++.|++.+|+++.||.||+++..
T Consensus 237 GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 237 GVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGS 277 (499)
T ss_dssp TCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred CCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCC
Confidence 57899999999999877778888888888999999999865
No 62
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=93.07 E-value=0.13 Score=47.95 Aligned_cols=52 Identities=15% Similarity=0.050 Sum_probs=42.7
Q ss_pred HHHHHHHHccC---CcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHH
Q 016772 121 LPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 121 ~~l~~~L~~~l---~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
..|.+.|.+.+ +|+++++|++|..++++|.|++.+|++++||.||.|.-..-
T Consensus 128 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 128 NDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp HHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTC
T ss_pred HHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcch
Confidence 44556665544 69999999999998888999999998899999999987643
No 63
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.90 E-value=0.14 Score=48.87 Aligned_cols=41 Identities=20% Similarity=0.298 Sum_probs=36.5
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++.|++.+|+++.||.||+++..
T Consensus 216 GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 216 DVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCE
T ss_pred CCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCC
Confidence 67899999999999877888888888989999999999865
No 64
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=92.76 E-value=0.15 Score=49.76 Aligned_cols=51 Identities=25% Similarity=0.376 Sum_probs=40.5
Q ss_pred HHHHHHHHc-----cCCcccCceeEEEEecCCeeE-EEECCCcEEEcCEEEEecChH
Q 016772 121 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 121 ~~l~~~L~~-----~l~I~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~t~p~~ 171 (383)
..+.+.|.+ +++|+++++|++|..+++++. |++.+|+++.||.||+|+-..
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~ 276 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHS 276 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 445555543 568999999999998887765 888899889999999998543
No 65
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=92.61 E-value=0.19 Score=47.16 Aligned_cols=41 Identities=29% Similarity=0.462 Sum_probs=36.1
Q ss_pred cCCcccCceeEEEEecCCee-EEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++ .|++.+|+++.||.||+++..
T Consensus 208 GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 208 GVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp TCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCC
T ss_pred CCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 67899999999999877776 588899999999999999875
No 66
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=92.57 E-value=0.19 Score=46.89 Aligned_cols=41 Identities=34% Similarity=0.475 Sum_probs=36.1
Q ss_pred cCCcccCceeEEEEecCCeeE-EEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++. |++.+|+++.||.||+++..
T Consensus 198 GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 198 GIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 678999999999998777764 88899999999999999875
No 67
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=92.41 E-value=0.2 Score=47.68 Aligned_cols=42 Identities=45% Similarity=0.634 Sum_probs=36.7
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..+++++.|++.+|+++.||.||+++...
T Consensus 222 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 222 GLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred CCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCC
Confidence 568999999999998888888888888889999999998653
No 68
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=92.14 E-value=0.2 Score=46.90 Aligned_cols=49 Identities=18% Similarity=0.297 Sum_probs=38.5
Q ss_pred hHHHHHHHHc-----cCCcccCceeEEEEec----CCeeEEEECCCcEEEcCEEEEecC
Q 016772 120 YLPVINTLAK-----GLDIRLGHRVTKITRH----YIGVKVTVEGGKTFVADAVVVAVP 169 (383)
Q Consensus 120 ~~~l~~~L~~-----~l~I~l~~~V~~I~~~----~~~v~V~~~~G~~~~ad~VI~t~p 169 (383)
...+.+.|.+ +++|+++++|++|..+ ++++.|++.+| +++||+||+|+-
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG 165 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATG 165 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCC
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCC
Confidence 3455555543 5689999999999977 56788888777 799999999983
No 69
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=92.05 E-value=0.25 Score=47.56 Aligned_cols=47 Identities=17% Similarity=0.294 Sum_probs=38.8
Q ss_pred HHHHHc-cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 124 INTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 124 ~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
.+.+.+ +++|++++.|++|..+++++.|++.+|+++.||.||+++..
T Consensus 233 ~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 233 MEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp HHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCC
Confidence 344433 67899999999998777777888889989999999999875
No 70
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=91.67 E-value=0.26 Score=46.11 Aligned_cols=41 Identities=27% Similarity=0.443 Sum_probs=35.5
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|++++.|++|..++....|++.+|+++.||.||+++..
T Consensus 199 GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 199 GVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp TCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCE
T ss_pred CCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCC
Confidence 67899999999998766445788899999999999999875
No 71
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=91.50 E-value=0.29 Score=46.63 Aligned_cols=41 Identities=24% Similarity=0.326 Sum_probs=36.1
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCc-EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGK-TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~-~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++.|++.+|+ ++.+|.||+++..
T Consensus 221 gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 221 GIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp TCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCC
Confidence 5789999999999987777888888998 8999999999865
No 72
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=91.46 E-value=0.35 Score=44.80 Aligned_cols=50 Identities=22% Similarity=0.222 Sum_probs=40.2
Q ss_pred HHHHHHHHccC--CcccCceeEEEEecCC-eeEEEECCCcEEEcCEEEEecCh
Q 016772 121 LPVINTLAKGL--DIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 121 ~~l~~~L~~~l--~I~l~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
..|-+.|.+.+ .|+++++|++++..++ +|+|++.||++++||.||-|=-.
T Consensus 112 ~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~ 164 (412)
T 4hb9_A 112 TELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGS 164 (412)
T ss_dssp HHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCT
T ss_pred HHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCC
Confidence 34666777766 5999999999987554 58899999999999999887543
No 73
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=91.43 E-value=0.22 Score=48.28 Aligned_cols=41 Identities=27% Similarity=0.385 Sum_probs=34.9
Q ss_pred cCCcccCceeEEEEecCCe----eEEEECCCc-EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIG----VKVTVEGGK-TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~----v~V~~~~G~-~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..++++ +.|++.+|+ ++.||.||+++..
T Consensus 269 GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 269 GMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp TCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred CcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 5789999999999976555 678888887 7999999999864
No 74
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=91.06 E-value=0.31 Score=46.26 Aligned_cols=46 Identities=17% Similarity=0.224 Sum_probs=37.3
Q ss_pred HHHHHc-cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 124 INTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 124 ~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
.+.|.+ +++|+++++|++|...++++.|++.+| ++.||.||+++..
T Consensus 196 ~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 196 QKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNL 242 (452)
T ss_dssp HHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCC
T ss_pred HHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCC
Confidence 333433 568999999999998778888888777 8999999999875
No 75
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=91.06 E-value=0.29 Score=44.30 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=36.7
Q ss_pred cCCcccCceeEEEEecCCeeE-EEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+++++++++|++|..+++++. |++.+| ++.+|+||+|+-..
T Consensus 90 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 90 ALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp TCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred CCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 567999999999999999999 998888 89999999999753
No 76
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=91.01 E-value=0.35 Score=45.91 Aligned_cols=41 Identities=15% Similarity=0.291 Sum_probs=35.2
Q ss_pred cCCcccCceeEEEEecCCe-eEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..++++ +.|++.+|+.+.||.||+++..
T Consensus 222 Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 222 GPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp SCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCC
Confidence 5789999999999976554 7788889988999999999864
No 77
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=90.61 E-value=0.38 Score=46.33 Aligned_cols=41 Identities=32% Similarity=0.442 Sum_probs=34.9
Q ss_pred cCCcccCceeEEEEecCCe-eEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..++++ +.|++.+|+++.||.||+++..
T Consensus 249 GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 249 GIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp TCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 5689999999999876544 6788889988999999999864
No 78
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=90.61 E-value=0.38 Score=46.08 Aligned_cols=41 Identities=10% Similarity=0.242 Sum_probs=34.4
Q ss_pred cCCcccCceeEEEEecCCe--eEEEECCC-cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIG--VKVTVEGG-KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~--v~V~~~~G-~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..++++ +.|++.+| +.+.||.||+++..
T Consensus 240 Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 240 GINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp TCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred CeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 5789999999999876555 67888888 78999999999864
No 79
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.60 E-value=0.39 Score=43.19 Aligned_cols=41 Identities=29% Similarity=0.366 Sum_probs=36.0
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|++|+.+++.+.|++.+|+.+.+|+||+|+-.
T Consensus 79 ~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 79 NPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGV 119 (335)
T ss_dssp CCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTT
T ss_pred CCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCC
Confidence 45788999999999887788898888888999999999875
No 80
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=90.47 E-value=0.34 Score=46.59 Aligned_cols=41 Identities=27% Similarity=0.388 Sum_probs=34.9
Q ss_pred cCCcccCceeEEEEecCCe-eEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..++++ +.|++.+|+++.||.||+++..
T Consensus 245 GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 245 GINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp TEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCC
Confidence 5679999999999887654 7788888988999999999865
No 81
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=90.39 E-value=0.33 Score=45.03 Aligned_cols=41 Identities=27% Similarity=0.193 Sum_probs=34.6
Q ss_pred cCCcccCceeEEEEecCCe-eEEEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..++++ +.|++.+| ++.||.||+|+-..
T Consensus 188 g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~ 229 (405)
T 2gag_B 188 GVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGH 229 (405)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGG
T ss_pred CCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchh
Confidence 5689999999999988776 45888888 79999999999764
No 82
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=89.73 E-value=0.58 Score=44.08 Aligned_cols=41 Identities=34% Similarity=0.481 Sum_probs=35.0
Q ss_pred cCCcccCceeEEEEe--cCCee-EEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITR--HYIGV-KVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~--~~~~v-~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|.. +++++ .|++.+|+++.||.||+++..
T Consensus 205 GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 205 GVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp TCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred CeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 678999999999987 55565 588889988999999999875
No 83
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=89.62 E-value=0.48 Score=46.17 Aligned_cols=39 Identities=31% Similarity=0.277 Sum_probs=34.8
Q ss_pred CcccCceeEEEEecCC--eeEEEECCCcEEEcCEEEEecCh
Q 016772 132 DIRLGHRVTKITRHYI--GVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 132 ~I~l~~~V~~I~~~~~--~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
.|+++++|+++.++++ +|.|++.+|+++.||+||+|+-.
T Consensus 105 ~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 105 HFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp GEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred eeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 5899999999998766 68899999988999999999874
No 84
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=89.62 E-value=0.5 Score=46.14 Aligned_cols=39 Identities=31% Similarity=0.279 Sum_probs=34.7
Q ss_pred CcccCceeEEEEecCC--eeEEEECCCcEEEcCEEEEecCh
Q 016772 132 DIRLGHRVTKITRHYI--GVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 132 ~I~l~~~V~~I~~~~~--~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
.|+++++|+++.++++ +|.|++.+|+++.||+||+|+-.
T Consensus 117 ~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 117 DIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGP 157 (549)
T ss_dssp GEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred cEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 5899999999998766 68899999988999999999874
No 85
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.60 E-value=0.43 Score=45.17 Aligned_cols=39 Identities=28% Similarity=0.239 Sum_probs=33.7
Q ss_pred CcccCceeEEEEecCCeeEEEECC---Cc---EEEcCEEEEecCh
Q 016772 132 DIRLGHRVTKITRHYIGVKVTVEG---GK---TFVADAVVVAVPL 170 (383)
Q Consensus 132 ~I~l~~~V~~I~~~~~~v~V~~~~---G~---~~~ad~VI~t~p~ 170 (383)
.|+++++|++|...+++|.|++.+ |+ ++.||+||+|+-.
T Consensus 131 ~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~ 175 (447)
T 2gv8_A 131 FIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGH 175 (447)
T ss_dssp GEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCS
T ss_pred eEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCC
Confidence 589999999999888888887765 76 7999999999876
No 86
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=89.49 E-value=0.52 Score=45.26 Aligned_cols=47 Identities=19% Similarity=0.061 Sum_probs=37.3
Q ss_pred HHHHHccCCcccCceeEEEEecCCeeEEEEC--CC--cEEEcCEEEEecCh
Q 016772 124 INTLAKGLDIRLGHRVTKITRHYIGVKVTVE--GG--KTFVADAVVVAVPL 170 (383)
Q Consensus 124 ~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~--~G--~~~~ad~VI~t~p~ 170 (383)
.+.|.+.++|+++++|++|..+++++.|++. +| +++.||.||+++..
T Consensus 222 ~~~l~~~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 222 EKTFNEEFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp HHHHHTTSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCC
T ss_pred HHHHhhCcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCC
Confidence 3444445789999999999988888887764 67 67999999999865
No 87
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=89.46 E-value=0.44 Score=45.35 Aligned_cols=40 Identities=25% Similarity=0.346 Sum_probs=34.5
Q ss_pred cCCcccCceeEEEEecCCe-eEEE-ECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIG-VKVT-VEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~-v~V~-~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..++++ +.|+ +.+|+ +.||.||+++..
T Consensus 225 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 225 GIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGR 266 (463)
T ss_dssp TCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCE
T ss_pred CCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCc
Confidence 5689999999999987666 5788 88897 999999999875
No 88
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=89.41 E-value=0.43 Score=45.95 Aligned_cols=42 Identities=29% Similarity=0.249 Sum_probs=35.7
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCc---EEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGK---TFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~---~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..++++|+|++.+|. +++||.||.|--..
T Consensus 121 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 121 GAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp TCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 5689999999999999889998887764 79999999987553
No 89
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=89.21 E-value=0.45 Score=46.36 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=34.0
Q ss_pred CcccCceeEEEEecCC--eeEEEECCCcEEEcCEEEEecCh
Q 016772 132 DIRLGHRVTKITRHYI--GVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 132 ~I~l~~~V~~I~~~~~--~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
.|+++++|+++.++++ +|.|++.+|++++||+||+|+-.
T Consensus 112 ~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 112 GITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp GEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred eEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 5899999999998654 68899999988999999999864
No 90
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=89.19 E-value=0.45 Score=40.58 Aligned_cols=40 Identities=23% Similarity=0.081 Sum_probs=32.9
Q ss_pred cCCcccCceeEEEEecCCee-EEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+ +++|++|..+++++ .|++.+|++++||.||+|+-.
T Consensus 83 gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~ 123 (232)
T 2cul_A 83 PLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGS 123 (232)
T ss_dssp TEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTT
T ss_pred CcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCC
Confidence 44566 67999999887775 478888888999999999876
No 91
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=88.96 E-value=0.65 Score=43.97 Aligned_cols=41 Identities=17% Similarity=0.338 Sum_probs=33.2
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++.....+|+++.||.||+++..
T Consensus 205 Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~ 245 (452)
T 2cdu_A 205 GVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGF 245 (452)
T ss_dssp TCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred CCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCC
Confidence 67899999999998766667533347888999999999865
No 92
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=88.93 E-value=0.41 Score=45.23 Aligned_cols=41 Identities=24% Similarity=0.365 Sum_probs=34.1
Q ss_pred cCCcccCceeEEEEe---------------cCCee-EEEECCCcEE--EcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITR---------------HYIGV-KVTVEGGKTF--VADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~---------------~~~~v-~V~~~~G~~~--~ad~VI~t~p~~ 171 (383)
+++|+.+++|++|.. +++++ .|++.+| ++ .||.||+|+-..
T Consensus 195 Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 195 GVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp TCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred CCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 568999999999988 56665 5888888 68 999999999764
No 93
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=88.88 E-value=0.49 Score=45.59 Aligned_cols=42 Identities=38% Similarity=0.404 Sum_probs=35.6
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCc---EEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGK---TFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~---~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..++++|+|++.+|. +++||.||.|--..
T Consensus 120 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 120 GADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp TCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred CCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 5689999999999999999988877664 79999999987553
No 94
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.83 E-value=0.65 Score=44.70 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=34.6
Q ss_pred cCCcccCceeEEEEecCCe-eEEEECCCcE-EEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIG-VKVTVEGGKT-FVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~-v~V~~~~G~~-~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..++++ +.|++.+|+. +.||.||+++..
T Consensus 231 gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 231 NINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp TCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCB
T ss_pred CCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCC
Confidence 5689999999999876544 7788888987 999999999864
No 95
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=88.69 E-value=0.69 Score=42.12 Aligned_cols=41 Identities=27% Similarity=0.329 Sum_probs=35.3
Q ss_pred cCCcccCceeEEEEecCC-eeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|++|..+++ .+.|++.+|+.+.+|+||+|+-.
T Consensus 88 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 88 NPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGL 129 (360)
T ss_dssp CCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTT
T ss_pred CCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCC
Confidence 457889999999998765 68898988888999999999875
No 96
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=88.57 E-value=0.63 Score=44.28 Aligned_cols=41 Identities=29% Similarity=0.463 Sum_probs=34.5
Q ss_pred cCCcccCceeEEEEecCCeeEEEEC-C--Cc--EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVE-G--GK--TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~-~--G~--~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++.|++. + |+ ++.||.||+++..
T Consensus 224 gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 224 GIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCE
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCc
Confidence 5689999999999988777777765 6 76 7999999999864
No 97
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=88.51 E-value=0.65 Score=44.04 Aligned_cols=41 Identities=22% Similarity=0.263 Sum_probs=34.5
Q ss_pred cCCcccCceeEEEEecCCeeEEEEC---CCcE--EEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVE---GGKT--FVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~---~G~~--~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++.|++. +|+. +.||.||+|+-.
T Consensus 330 ~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 330 RHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGY 375 (463)
T ss_dssp CSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCE
T ss_pred CeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCC
Confidence 5679999999999998888877765 6754 899999999865
No 98
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=88.11 E-value=0.61 Score=48.00 Aligned_cols=50 Identities=28% Similarity=0.228 Sum_probs=39.3
Q ss_pred HHHHHHHc-----cCCcccCceeEEEEecCCee-EEEECCCcEEEcCEEEEecChHH
Q 016772 122 PVINTLAK-----GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 122 ~l~~~L~~-----~l~I~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
.+.++|++ +++|+++++|++|..+++++ .|++.+| +++||+||+|+-...
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 44455543 56899999999999888876 4788887 799999999997654
No 99
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=87.96 E-value=0.62 Score=42.48 Aligned_cols=41 Identities=24% Similarity=0.136 Sum_probs=35.5
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..+++++.|++.+| .+.+|+||+|+-..
T Consensus 102 gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 102 ELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp TCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred CCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 567999999999998877888988887 58999999998764
No 100
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=87.96 E-value=0.79 Score=44.73 Aligned_cols=40 Identities=23% Similarity=0.477 Sum_probs=34.6
Q ss_pred cCCcccCceeEEEEe-------------------cCCeeEEEECCCcEEEcCEEEEecC
Q 016772 130 GLDIRLGHRVTKITR-------------------HYIGVKVTVEGGKTFVADAVVVAVP 169 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~-------------------~~~~v~V~~~~G~~~~ad~VI~t~p 169 (383)
+++|++++.|++|.. .++++.+++.+|+++.||.||+++.
T Consensus 206 GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G 264 (565)
T 3ntd_A 206 GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIG 264 (565)
T ss_dssp TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSC
T ss_pred CCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcC
Confidence 678999999999987 4567788888898999999999984
No 101
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=87.90 E-value=0.73 Score=43.86 Aligned_cols=48 Identities=23% Similarity=0.310 Sum_probs=35.9
Q ss_pred HHHHH-H-ccCCcccCceeEEEEecCCeeEEEEC--CC--cEEEcCEEEEecCh
Q 016772 123 VINTL-A-KGLDIRLGHRVTKITRHYIGVKVTVE--GG--KTFVADAVVVAVPL 170 (383)
Q Consensus 123 l~~~L-~-~~l~I~l~~~V~~I~~~~~~v~V~~~--~G--~~~~ad~VI~t~p~ 170 (383)
+.+.| . ++++|+++++|++|..+++++.|++. +| +++.||.||+++..
T Consensus 221 l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~ 274 (468)
T 2qae_A 221 LVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGR 274 (468)
T ss_dssp HHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCE
T ss_pred HHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCc
Confidence 44455 3 36789999999999987777777665 66 57999999999865
No 102
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=87.41 E-value=0.6 Score=43.03 Aligned_cols=42 Identities=14% Similarity=0.111 Sum_probs=34.3
Q ss_pred cCCcccCceeEEEEecCCeeE-EEE---CCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVK-VTV---EGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~-V~~---~~G~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..++++|. |++ .++.+++||.||.|.-..
T Consensus 116 gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 116 GADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp TCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred CCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcc
Confidence 678999999999999888876 766 345689999999998543
No 103
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=87.22 E-value=0.54 Score=45.00 Aligned_cols=41 Identities=29% Similarity=0.226 Sum_probs=34.1
Q ss_pred cCCcccCceeEEEEecCCeeEEEECC----CcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEG----GKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~----G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++.|++.+ |+++.||.||+++..
T Consensus 240 gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 240 FDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp EEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCE
T ss_pred CCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCC
Confidence 45799999999999877777777666 777899999999864
No 104
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=87.18 E-value=0.92 Score=43.54 Aligned_cols=53 Identities=19% Similarity=0.150 Sum_probs=40.5
Q ss_pred CChHHHHHHHHc-cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 118 RGYLPVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 118 gG~~~l~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+|...+-+.+.+ +++|++++.|++|..+++...|++.+|+++.||.||+++..
T Consensus 258 gG~~gle~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~ 311 (493)
T 1y56_A 258 SKADEVIQELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGR 311 (493)
T ss_dssp TTHHHHHHHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCE
T ss_pred CCHHHHHHHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCc
Confidence 455555555543 78999999999998655444577888889999999999875
No 105
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=87.09 E-value=0.77 Score=43.78 Aligned_cols=41 Identities=37% Similarity=0.374 Sum_probs=34.0
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCC---cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGG---KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G---~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++.|+..++ +.+.||.||+++..
T Consensus 235 Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 235 GLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp TEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCE
T ss_pred CCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCC
Confidence 457999999999998887877776654 57999999999875
No 106
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=87.01 E-value=1 Score=39.94 Aligned_cols=41 Identities=22% Similarity=0.247 Sum_probs=33.8
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
++++++ ++|++|..+++.+.|++.+|+.+.+|+||+|+-..
T Consensus 84 ~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 84 EVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp TCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred CCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 467888 99999999888899999988899999999998543
No 107
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=86.86 E-value=0.98 Score=44.19 Aligned_cols=41 Identities=29% Similarity=0.270 Sum_probs=31.8
Q ss_pred cCCcccCceeEEEEecC-CeeE-E--EECCCc--EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHY-IGVK-V--TVEGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~-~~v~-V--~~~~G~--~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..++ ++|. | .+.+|+ .+.||.||+|+-.
T Consensus 264 gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 264 GIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGG 310 (566)
T ss_dssp TCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCC
T ss_pred CCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCC
Confidence 57899999999999877 6543 3 334775 5899999999844
No 108
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=86.73 E-value=0.78 Score=40.92 Aligned_cols=40 Identities=13% Similarity=0.138 Sum_probs=34.6
Q ss_pred cCCcccCceeEEEEecCC-eeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|++|..+++ .+.|++.+|+ +.+|+||+|+-.
T Consensus 81 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 81 DQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp CCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred CCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 457899999999998876 6889998885 999999999876
No 109
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=86.71 E-value=0.8 Score=44.18 Aligned_cols=53 Identities=23% Similarity=0.256 Sum_probs=35.9
Q ss_pred CChHHHHHHHHc-----cCCcccCceeEEEEec-CCeeE-EEEC-CCc--EEEcC-EEEEecCh
Q 016772 118 RGYLPVINTLAK-----GLDIRLGHRVTKITRH-YIGVK-VTVE-GGK--TFVAD-AVVVAVPL 170 (383)
Q Consensus 118 gG~~~l~~~L~~-----~l~I~l~~~V~~I~~~-~~~v~-V~~~-~G~--~~~ad-~VI~t~p~ 170 (383)
+|...+.+.|.+ +++|+++++|++|..+ +++|. |.+. +|+ ++.|| .||+|+--
T Consensus 199 ~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 199 GGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGS 262 (510)
T ss_dssp CTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCC
Confidence 344456666644 5689999999999987 45543 4332 342 58996 99998843
No 110
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=86.68 E-value=0.85 Score=41.91 Aligned_cols=39 Identities=28% Similarity=0.511 Sum_probs=32.9
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|.. ++ .|++.+|++++||.||.|.-..
T Consensus 121 gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 121 GVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVG 159 (379)
T ss_dssp TCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTT
T ss_pred CCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCcc
Confidence 568999999999987 34 7888889889999999998653
No 111
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=86.65 E-value=0.28 Score=45.75 Aligned_cols=50 Identities=20% Similarity=0.157 Sum_probs=33.3
Q ss_pred HHHHHHHHc-----cCCcccCceeE---------EEEecCCeeEEEECCCcEEEcCEEEEecChH
Q 016772 121 LPVINTLAK-----GLDIRLGHRVT---------KITRHYIGVKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 121 ~~l~~~L~~-----~l~I~l~~~V~---------~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
..+.++|.+ +++|+++++|+ +|..++++|.|++.+| .++||.||+|+-..
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCcc
Confidence 345555543 46799999999 8888777787777777 79999999999765
No 112
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=86.53 E-value=0.99 Score=42.84 Aligned_cols=41 Identities=29% Similarity=0.381 Sum_probs=33.6
Q ss_pred cCCcccCceeEEEEecCCeeEEEEC-CC--cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVE-GG--KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~-~G--~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++.|++. +| +++.||.||+++..
T Consensus 226 gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 226 GVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp TCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCE
T ss_pred CCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCC
Confidence 5789999999999987767777654 56 57999999999865
No 113
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=86.46 E-value=0.26 Score=44.50 Aligned_cols=41 Identities=24% Similarity=0.237 Sum_probs=30.3
Q ss_pred hCCCCCEEEeccccCCCC-----CchhhHHHHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSMSY-----PGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~~~-----~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
.+.++++|.|||+..... +.+.-+++.||++||+.|++.|.
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 345789999999854211 12455678999999999999875
No 114
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=86.05 E-value=1 Score=41.56 Aligned_cols=42 Identities=12% Similarity=0.041 Sum_probs=34.4
Q ss_pred cCCcccCceeEEEEecC-CeeEEEE-CCCc--EEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHY-IGVKVTV-EGGK--TFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~-~~v~V~~-~~G~--~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..++ +++.|++ .+|+ +++||.||.|.-..
T Consensus 117 g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~ 162 (394)
T 1k0i_A 117 GATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFH 162 (394)
T ss_dssp TCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTT
T ss_pred CCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCC
Confidence 56899999999998864 5677776 6886 69999999998654
No 115
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=86.02 E-value=1.2 Score=43.70 Aligned_cols=41 Identities=24% Similarity=0.158 Sum_probs=31.5
Q ss_pred cCCcccCceeEEEEecC-Cee---EEEECCCc--EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHY-IGV---KVTVEGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~-~~v---~V~~~~G~--~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..++ ++| .+...+|+ ++.||.||+|+-.
T Consensus 269 gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 269 NIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp TCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred CCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 56899999999999876 554 33333675 6899999999854
No 116
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=85.96 E-value=1 Score=42.91 Aligned_cols=41 Identities=22% Similarity=0.447 Sum_probs=33.6
Q ss_pred cCCcccCceeEEEEecCCe-eEEEE-----CCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIG-VKVTV-----EGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~-v~V~~-----~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..++++ +.|+. .+|+++.||.||+++..
T Consensus 234 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 234 GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGR 280 (474)
T ss_dssp TCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCE
T ss_pred CCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCC
Confidence 5789999999999987766 66663 46678999999999865
No 117
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=85.82 E-value=1.2 Score=43.43 Aligned_cols=42 Identities=26% Similarity=0.283 Sum_probs=34.7
Q ss_pred cCCcccCceeEEEEecCCe--eEEEECCCcEEEcCEEEEecChHH
Q 016772 130 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
+++|+++ +|++|..++++ +.|++.+|++++||.||.|.-..-
T Consensus 209 Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 209 GVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp CCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred CcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 6789999 99999886555 568888898899999999987643
No 118
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=85.78 E-value=1.1 Score=42.25 Aligned_cols=43 Identities=21% Similarity=0.021 Sum_probs=34.1
Q ss_pred cCCcccCceeEEEEecCCeeE-EEEC---CCc--EEEcCEEEEecChHH
Q 016772 130 GLDIRLGHRVTKITRHYIGVK-VTVE---GGK--TFVADAVVVAVPLGV 172 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~-V~~~---~G~--~~~ad~VI~t~p~~~ 172 (383)
+++|+++++|++|..++++|. |++. +|+ +++||.||.|.-...
T Consensus 114 gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 114 GVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp TCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred CCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 578999999999998888764 4443 675 799999999986543
No 119
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=85.58 E-value=1.3 Score=39.14 Aligned_cols=40 Identities=28% Similarity=0.423 Sum_probs=34.0
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
++++++ ++|++|..+++++.|++.+|+.+.+|+||+|+-.
T Consensus 73 ~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 73 GLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp SCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCE
T ss_pred CCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCC
Confidence 456777 7999999888888888888888999999999874
No 120
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=85.52 E-value=1.3 Score=42.16 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=33.9
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..+++.+.|++. +.++.||.||+++...
T Consensus 230 Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 230 GIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp TCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEE
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCC
Confidence 5789999999999987777777776 4579999999998653
No 121
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=85.48 E-value=1.3 Score=43.41 Aligned_cols=40 Identities=43% Similarity=0.400 Sum_probs=30.2
Q ss_pred cCCcccCceeEEEEecC-Cee---EEEECCCc--EEEcCEEEEecC
Q 016772 130 GLDIRLGHRVTKITRHY-IGV---KVTVEGGK--TFVADAVVVAVP 169 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~-~~v---~V~~~~G~--~~~ad~VI~t~p 169 (383)
+++|+++++|++|..++ ++| .+.+.+|+ .+.||.||+|+-
T Consensus 269 gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtG 314 (572)
T 1d4d_A 269 GTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAG 314 (572)
T ss_dssp TCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCC
T ss_pred CCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCC
Confidence 56899999999998776 554 33334674 589999999985
No 122
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=85.45 E-value=1.3 Score=43.12 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=36.0
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecC
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVP 169 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p 169 (383)
++++++++.|+++...++++.|.+.++..+.+|.|++++-
T Consensus 277 gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvG 316 (542)
T 4b1b_A 277 GVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIG 316 (542)
T ss_dssp TCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred cceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccc
Confidence 4579999999999999999999998888899999999974
No 123
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=85.44 E-value=1.3 Score=39.28 Aligned_cols=41 Identities=15% Similarity=0.295 Sum_probs=31.5
Q ss_pred cCCcccCceeEEEEecCCeeE-EEECC----C--cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVK-VTVEG----G--KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~-V~~~~----G--~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++. |++.+ | +++.||.||+++..
T Consensus 198 gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 198 NIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp SEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred CeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 668999999999998765543 44433 4 57999999999875
No 124
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.38 E-value=0.88 Score=43.08 Aligned_cols=42 Identities=31% Similarity=0.272 Sum_probs=33.8
Q ss_pred cCCcccCceeEEEEecCCeeEEEEC---CCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVE---GGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~---~G~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..+++++.|++. +|+++.+|.||+++...
T Consensus 225 gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 225 GVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp TCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEE
T ss_pred CCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCC
Confidence 5689999999999987777776654 45679999999998653
No 125
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=85.33 E-value=0.9 Score=44.27 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=34.1
Q ss_pred CcccCceeEEEEecCC--eeEEEECCCcEEEcCEEEEecCh
Q 016772 132 DIRLGHRVTKITRHYI--GVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 132 ~I~l~~~V~~I~~~~~--~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
.|+++++|++++++++ .|.|++.+|++++||.||+|+-.
T Consensus 105 ~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 105 HYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGP 145 (545)
T ss_dssp GEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCS
T ss_pred cEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 5899999999998654 68899999988999999999874
No 126
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=85.25 E-value=1.3 Score=41.32 Aligned_cols=43 Identities=30% Similarity=0.403 Sum_probs=34.0
Q ss_pred HHHHHc-cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 124 INTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 124 ~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
.+.|.+ +++|+++++|++|. + + .|++.+|+++.||.||+++..
T Consensus 194 ~~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 194 ARYHAAQGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHTTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHcCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcCC
Confidence 334433 67899999999998 3 3 567788989999999999875
No 127
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=85.19 E-value=0.83 Score=42.53 Aligned_cols=49 Identities=22% Similarity=0.273 Sum_probs=37.1
Q ss_pred HHHHHHHc--c-CCcccCceeEEEEecCCeeEEEECC---C--cEEEcCEEEEecChH
Q 016772 122 PVINTLAK--G-LDIRLGHRVTKITRHYIGVKVTVEG---G--KTFVADAVVVAVPLG 171 (383)
Q Consensus 122 ~l~~~L~~--~-l~I~l~~~V~~I~~~~~~v~V~~~~---G--~~~~ad~VI~t~p~~ 171 (383)
.|.+.+.+ + ++|+++++|++|.. +++|.|++.+ | .+++||.||.|.-..
T Consensus 112 ~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~ 168 (410)
T 3c96_A 112 ILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIH 168 (410)
T ss_dssp HHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTT
T ss_pred HHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCcc
Confidence 34455543 3 47999999999998 7778887654 7 579999999998654
No 128
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=85.16 E-value=1.1 Score=44.34 Aligned_cols=40 Identities=28% Similarity=0.210 Sum_probs=33.8
Q ss_pred cCCcccCceeEEEEecCCeeE-EEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++| ++++|+.|..++++|. |.+.+|..+.||+||+|+-.
T Consensus 138 GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~ 178 (637)
T 2zxi_A 138 NLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGT 178 (637)
T ss_dssp TEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTT
T ss_pred CCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCC
Confidence 4567 6889999998888764 88889989999999999865
No 129
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=84.82 E-value=0.85 Score=42.25 Aligned_cols=39 Identities=15% Similarity=0.191 Sum_probs=33.4
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|++|+.++.. |++.+|+++.+|++|+|+-.
T Consensus 76 ~i~~~~~~~V~~id~~~~~--v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNKL--VTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp TCEEECSCCEEEEETTTTE--EEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCCE--EEECCCCEEECCEEEEecCC
Confidence 6789999999999987664 66788989999999999864
No 130
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=84.67 E-value=1.4 Score=38.50 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=32.1
Q ss_pred cCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 135 LGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 135 l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
++++|+.|+.+++++.|++.+|+++.+|+||+|+-.
T Consensus 75 ~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~ 110 (297)
T 3fbs_A 75 VEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGV 110 (297)
T ss_dssp EESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCC
T ss_pred EEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCC
Confidence 367999999988889999999988999999999865
No 131
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=84.57 E-value=1.2 Score=42.41 Aligned_cols=41 Identities=37% Similarity=0.534 Sum_probs=33.0
Q ss_pred cCCcccCceeEEEEecCCeeEEEEC---CC--cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVE---GG--KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~---~G--~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++.|++. +| +++.+|.||+++..
T Consensus 232 gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 277 (470)
T 1dxl_A 232 GMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGR 277 (470)
T ss_dssp SCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCE
T ss_pred CCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCC
Confidence 5789999999999977666766653 44 67999999999865
No 132
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=84.50 E-value=1 Score=41.85 Aligned_cols=37 Identities=22% Similarity=0.407 Sum_probs=31.1
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|++|+. ++ |++.+|+++.||.||++++.
T Consensus 232 gV~~~~~~~v~~i~~--~~--v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 232 GIKLVHNFKIKEIRE--HE--IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp TCEEECSCCEEEECS--SE--EEETTSCEEECSEEEEECCE
T ss_pred CCEEEcCCceEEECC--Ce--EEECCCCEEeeeEEEECCCC
Confidence 678999999999964 33 66788989999999999875
No 133
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=84.42 E-value=1.5 Score=42.09 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=34.3
Q ss_pred cCCcccCceeEEEEecCCe--eEEEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+++|+.+ +|++|..++++ +.|++.+|++++||.||.|.-..
T Consensus 187 gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 187 GVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFR 229 (511)
T ss_dssp TCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGG
T ss_pred CCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcc
Confidence 5689999 99999986555 56888888889999999998764
No 134
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=84.41 E-value=0.63 Score=43.17 Aligned_cols=40 Identities=18% Similarity=0.247 Sum_probs=35.5
Q ss_pred CCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 131 LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 131 l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
++|++++.|+.++.++++..|.+.+|+++.||.||+++|.
T Consensus 217 i~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 217 IEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp EEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCE
T ss_pred cEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCc
Confidence 3689999999999888888899999999999999998764
No 135
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=84.40 E-value=1.3 Score=39.18 Aligned_cols=41 Identities=15% Similarity=0.170 Sum_probs=34.1
Q ss_pred cCCcccCceeEEEEecC---CeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHY---IGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~---~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|+.|..+. +.+.|++.+|+.+.+|+||+|+-.
T Consensus 70 ~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~ 113 (310)
T 1fl2_A 70 DVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGA 113 (310)
T ss_dssp CEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCE
T ss_pred CCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCC
Confidence 45789999999998653 367888888888999999999865
No 136
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=84.31 E-value=1.1 Score=43.68 Aligned_cols=39 Identities=18% Similarity=0.231 Sum_probs=32.7
Q ss_pred cccCceeEEEEecCCeeEEEECC---C--cEEEcCEEEEecChH
Q 016772 133 IRLGHRVTKITRHYIGVKVTVEG---G--KTFVADAVVVAVPLG 171 (383)
Q Consensus 133 I~l~~~V~~I~~~~~~v~V~~~~---G--~~~~ad~VI~t~p~~ 171 (383)
|+++++|++|..++++|+|++.+ | .+++||+||.|.-..
T Consensus 152 v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~ 195 (549)
T 2r0c_A 152 LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGAS 195 (549)
T ss_dssp EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTT
T ss_pred cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCC
Confidence 99999999999988888877654 6 469999999987553
No 137
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=84.20 E-value=1.2 Score=42.57 Aligned_cols=41 Identities=39% Similarity=0.548 Sum_probs=33.6
Q ss_pred cCCcccCceeEEEEecCCeeEEEECC---C--cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEG---G--KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~---G--~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++.|++.+ | +++.||.||+++..
T Consensus 253 gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 253 GIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred CCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 56899999999999888887766542 5 57999999999864
No 138
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=84.12 E-value=1.3 Score=42.04 Aligned_cols=41 Identities=24% Similarity=0.201 Sum_probs=32.7
Q ss_pred cCC--cccCceeEEEEecCC--eeEEEECC---C--cEEEcCEEEEecCh
Q 016772 130 GLD--IRLGHRVTKITRHYI--GVKVTVEG---G--KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~--I~l~~~V~~I~~~~~--~v~V~~~~---G--~~~~ad~VI~t~p~ 170 (383)
+++ |+++++|++|...++ ++.|++.+ | .++.||+||+|+-.
T Consensus 115 gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 115 GVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp TCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCS
T ss_pred CCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 455 889999999998766 67777654 4 56899999999874
No 139
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=83.96 E-value=1.1 Score=40.05 Aligned_cols=51 Identities=6% Similarity=0.011 Sum_probs=38.2
Q ss_pred hHHHHHHHHc--cCCcccCceeEEEEecCCeeE-EEECC-----CcEEEcCEEEEecCh
Q 016772 120 YLPVINTLAK--GLDIRLGHRVTKITRHYIGVK-VTVEG-----GKTFVADAVVVAVPL 170 (383)
Q Consensus 120 ~~~l~~~L~~--~l~I~l~~~V~~I~~~~~~v~-V~~~~-----G~~~~ad~VI~t~p~ 170 (383)
...+.+.|.+ +++|+++++|++|..+++++. |++.+ ++++.||.||+++..
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 4566666643 678999999999998776543 55443 357899999999875
No 140
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=83.75 E-value=1.5 Score=42.09 Aligned_cols=43 Identities=26% Similarity=0.169 Sum_probs=34.6
Q ss_pred cCCcccCceeEEEEecCCeeEEEE---CCCc--EEEcCEEEEecChHH
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTV---EGGK--TFVADAVVVAVPLGV 172 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~---~~G~--~~~ad~VI~t~p~~~ 172 (383)
+++|+.+++|++|..+++.+.|++ .+|+ .++||.||.|+-...
T Consensus 163 Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 163 GGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred CCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 568999999999998776566766 3575 689999999997654
No 141
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=83.70 E-value=1.2 Score=42.49 Aligned_cols=41 Identities=32% Similarity=0.436 Sum_probs=32.5
Q ss_pred cCCcccCceeEEEEe--cCCeeEEEEC-----CCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITR--HYIGVKVTVE-----GGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~--~~~~v~V~~~-----~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|.. +++.+.|++. +|+.+.||.||+++..
T Consensus 238 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 238 GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 568999999999987 5566666654 4567999999999864
No 142
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=83.47 E-value=1.4 Score=39.00 Aligned_cols=43 Identities=19% Similarity=0.251 Sum_probs=34.3
Q ss_pred HHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 313 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 313 ~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
.+++.++++|-+||.+... ...++.|+..|+.||+.|.+.|.+
T Consensus 265 ~~~Ts~pgIyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 265 DMTTSVPGIFAAGDVRDKG-LRQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp TSBCSSTTEEECSTTBSCS-CCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeecCCCc-chHHHHHHHHHHHHHHHHHHHHHh
Confidence 3466788999999987643 247889999999999999877654
No 143
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=83.06 E-value=1.8 Score=41.10 Aligned_cols=49 Identities=24% Similarity=0.349 Sum_probs=37.8
Q ss_pred HHHHHHHcc--CCcccCceeEEEEecC-CeeEEEEC--CCc--EEEcCEEEEecCh
Q 016772 122 PVINTLAKG--LDIRLGHRVTKITRHY-IGVKVTVE--GGK--TFVADAVVVAVPL 170 (383)
Q Consensus 122 ~l~~~L~~~--l~I~l~~~V~~I~~~~-~~v~V~~~--~G~--~~~ad~VI~t~p~ 170 (383)
.+.+.+.+. ++|+++++|++|..++ +++.|++. +|+ ++.||.||+++..
T Consensus 215 ~~~~~l~~~l~v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 215 DIVNTLLSILKLNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp HHHHHHHHHHCCCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCE
T ss_pred HHHHHHHhcCEEEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCC
Confidence 344444432 6799999999999877 78888776 675 7999999999875
No 144
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=82.28 E-value=1.9 Score=41.11 Aligned_cols=41 Identities=15% Similarity=0.050 Sum_probs=32.1
Q ss_pred cCCcccCceeEEEEecCC-eeEEEECCCc-----EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYI-GVKVTVEGGK-----TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~-~v~V~~~~G~-----~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|...++ .+.|++.+|+ ++.||.||+++..
T Consensus 241 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 241 GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp TCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 578999999999997654 4666665543 7899999999864
No 145
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=82.15 E-value=1.7 Score=38.22 Aligned_cols=49 Identities=12% Similarity=0.072 Sum_probs=34.4
Q ss_pred HHHHHHHc--cCCcccCceeEEEEecCCeeE-EEEC---------CC-----cEEEcCEEEEecCh
Q 016772 122 PVINTLAK--GLDIRLGHRVTKITRHYIGVK-VTVE---------GG-----KTFVADAVVVAVPL 170 (383)
Q Consensus 122 ~l~~~L~~--~l~I~l~~~V~~I~~~~~~v~-V~~~---------~G-----~~~~ad~VI~t~p~ 170 (383)
.|.+.+.+ +++|+++++|++|..+++++. |.+. +| ..++||.||+|+-.
T Consensus 124 ~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 124 TIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 34455543 567999999999998877652 4331 22 57999999998754
No 146
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=81.63 E-value=1.8 Score=40.88 Aligned_cols=49 Identities=18% Similarity=0.110 Sum_probs=35.7
Q ss_pred HHHHHHHcc--CCcccCceeEEEEec---CCe--eEEEECCCc----EEEcCEEEEecCh
Q 016772 122 PVINTLAKG--LDIRLGHRVTKITRH---YIG--VKVTVEGGK----TFVADAVVVAVPL 170 (383)
Q Consensus 122 ~l~~~L~~~--l~I~l~~~V~~I~~~---~~~--v~V~~~~G~----~~~ad~VI~t~p~ 170 (383)
...+..++. +.|+++++|++|+.+ ++. +.|++.+|+ ++.||+||+|+-.
T Consensus 131 ~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 131 DYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 334444444 479999999999986 333 467777765 7999999999864
No 147
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=81.57 E-value=1.5 Score=39.22 Aligned_cols=42 Identities=29% Similarity=0.264 Sum_probs=34.1
Q ss_pred hCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 357 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 357 (383)
.+..+++|.+||.+... ......|+..|..||..|.+.|.++
T Consensus 284 ~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~ 325 (333)
T 1vdc_A 284 QTSVPGVFAAGDVQDKK-YRQAITAAGTGCMAALDAEHYLQEI 325 (333)
T ss_dssp BCSSTTEEECGGGGCSS-CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEeeeccCCC-chhHHHHHHhHHHHHHHHHHHHHhc
Confidence 45567999999998763 3478889999999999999888654
No 148
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=81.53 E-value=1.5 Score=43.44 Aligned_cols=41 Identities=27% Similarity=0.207 Sum_probs=33.8
Q ss_pred cCCcccCceeEEEEecCCee-EEEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+++| ++++|+.|..++++| .|++.+|..+.||.||+|+-..
T Consensus 139 GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 139 NLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp TEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred CCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 4567 688999998877776 4888889889999999998653
No 149
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=80.99 E-value=1.7 Score=38.60 Aligned_cols=50 Identities=8% Similarity=0.072 Sum_probs=35.4
Q ss_pred HHHHHHHH-ccCCcccCceeEEEEecCCeeEEEECC-----CcEEEcCEEEEecCh
Q 016772 121 LPVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEG-----GKTFVADAVVVAVPL 170 (383)
Q Consensus 121 ~~l~~~L~-~~l~I~l~~~V~~I~~~~~~v~V~~~~-----G~~~~ad~VI~t~p~ 170 (383)
....+.|. ++++++++++|++|..+++.+.|++.+ ++++.+|.||+++..
T Consensus 193 ~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 193 EHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp HHHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeecc
Confidence 33444443 367899999999998766654455443 356899999998874
No 150
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=80.99 E-value=1.7 Score=43.10 Aligned_cols=48 Identities=21% Similarity=0.272 Sum_probs=36.6
Q ss_pred HHHHHHc--cCCcccCceeEEEEecCCeeE-EEECCCcEEEcCEEEEecChH
Q 016772 123 VINTLAK--GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 123 l~~~L~~--~l~I~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+.+.+.+ +++| ++..|+.|..++++|. |++.+|+.+.||.||+|+-..
T Consensus 123 L~~~l~~~~GV~I-~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 123 MRRIVEHEPNIDL-LQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHTCTTEEE-EECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHhCCCCEE-EeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 3444443 4567 5679999988888877 888889899999999998643
No 151
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=80.45 E-value=2.2 Score=41.86 Aligned_cols=38 Identities=13% Similarity=0.293 Sum_probs=32.0
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecC
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVP 169 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p 169 (383)
+++|+++++|++|..++++ |++.+|+++.||.||+++.
T Consensus 242 GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G 279 (588)
T 3ics_A 242 DVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIG 279 (588)
T ss_dssp TCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSC
T ss_pred CCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccC
Confidence 6789999999999876554 5667888999999999984
No 152
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=79.84 E-value=1.9 Score=37.63 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=33.1
Q ss_pred hCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
++..+++|.+||.+.. +..++.|+..|..||..|.+.+.
T Consensus 254 ~t~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 254 QTTARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp BCSSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHh
Confidence 3556899999999875 46899999999999999988774
No 153
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=79.83 E-value=2.9 Score=36.85 Aligned_cols=50 Identities=12% Similarity=0.162 Sum_probs=36.8
Q ss_pred HHHHHHHHc--cCCcccCceeEEEEecCCee-EEEEC---CCc--EEEcCEEEEecCh
Q 016772 121 LPVINTLAK--GLDIRLGHRVTKITRHYIGV-KVTVE---GGK--TFVADAVVVAVPL 170 (383)
Q Consensus 121 ~~l~~~L~~--~l~I~l~~~V~~I~~~~~~v-~V~~~---~G~--~~~ad~VI~t~p~ 170 (383)
..+.+.|.+ +++|+++++|++|..+++++ .|++. +|+ ++.||.||+++..
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 456677753 67899999999998775654 34443 665 6899999998864
No 154
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=79.78 E-value=1.4 Score=37.44 Aligned_cols=35 Identities=17% Similarity=0.183 Sum_probs=30.2
Q ss_pred CCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHH
Q 016772 317 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 317 p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
.+++||.+|+.. . .|....|+++|+.+|+.|++.|
T Consensus 197 ~~p~iya~G~~a-~--~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 197 RLEGLYAVGLCV-R--EGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TSBSEEECGGGT-S--CCCHHHHHHHHHHHHHHHHHHC
T ss_pred ccccceeeeecc-c--CccHHHHHHHHHHHHHHHHhhc
Confidence 567999999999 3 4588889999999999998765
No 155
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=79.67 E-value=2.6 Score=40.08 Aligned_cols=41 Identities=15% Similarity=0.147 Sum_probs=32.7
Q ss_pred cCCcccCceeEEEEecCCe--eEEEECC---C----cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIG--VKVTVEG---G----KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~--v~V~~~~---G----~~~~ad~VI~t~p~ 170 (383)
+++|++++.|++|..++++ +.|++.+ | +.+.+|.||+++..
T Consensus 242 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 242 GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 5689999999999877655 6676664 2 57899999999865
No 156
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=79.57 E-value=2.5 Score=37.26 Aligned_cols=50 Identities=20% Similarity=0.322 Sum_probs=36.0
Q ss_pred HHHHHHHHc--cCCcccCceeEEEEecCCeeEEEECC---Cc--EEEcCEEEEecCh
Q 016772 121 LPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEG---GK--TFVADAVVVAVPL 170 (383)
Q Consensus 121 ~~l~~~L~~--~l~I~l~~~V~~I~~~~~~v~V~~~~---G~--~~~ad~VI~t~p~ 170 (383)
..+.+.+.+ +++++++++|++|..+++...|++.+ |+ .+.+|.||+++..
T Consensus 193 ~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 193 PIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 345555543 56899999999998775443455544 75 6899999999864
No 157
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=79.24 E-value=2.9 Score=40.36 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=33.0
Q ss_pred cCCcccCceeEEEEecCCe--eEEEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
+++|+.+ +|++|..++++ +.|++.+|.+++||.||.|.-..
T Consensus 190 Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 190 GVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAK 232 (526)
T ss_dssp CCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGG
T ss_pred CCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcc
Confidence 6789999 59999887555 35778887789999999998664
No 158
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=79.08 E-value=3 Score=39.48 Aligned_cols=42 Identities=24% Similarity=0.176 Sum_probs=35.0
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 357 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 357 (383)
+++..+++|.+||.... ...+..|+..|+.||+.|...|..+
T Consensus 405 ~~Ts~~~VfA~GD~~~g--~~~v~~A~~~G~~aA~~i~~~L~~~ 446 (456)
T 2vdc_G 405 KMTNMDGVFAAGDIVRG--ASLVVWAIRDGRDAAEGIHAYAKAK 446 (456)
T ss_dssp CBCSSTTEEECGGGGSS--CCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEeccccCC--chHHHHHHHHHHHHHHHHHHHhhcC
Confidence 34556799999999875 4689999999999999999888654
No 159
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=79.05 E-value=2 Score=37.77 Aligned_cols=42 Identities=26% Similarity=0.299 Sum_probs=34.3
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
+++..+++|.+||.+... ...+..|+..|+.||..|.+.|.+
T Consensus 272 ~~t~~~~v~a~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 272 MQTSVAGLFAAGDLRKDA-PKQVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp CBCSSTTEEECGGGBTTC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEeecccCCc-hhhhhhHHhhHHHHHHHHHHHHHh
Confidence 445678999999997542 458899999999999999988754
No 160
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=78.81 E-value=3.1 Score=39.75 Aligned_cols=46 Identities=17% Similarity=0.403 Sum_probs=33.8
Q ss_pred HHHHHHc-cCCcccCceeEEEEecCCeeE-EEECCCcEEEcCEEEEecCh
Q 016772 123 VINTLAK-GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 123 l~~~L~~-~l~I~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~t~p~ 170 (383)
+.+.|.+ +++|+++++|++|.. ++++. |.+ +|+++.||.||+++..
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGF 289 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCC
Confidence 3344433 678999999999986 44443 555 6778999999999864
No 161
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=78.59 E-value=2.1 Score=40.39 Aligned_cols=48 Identities=23% Similarity=0.296 Sum_probs=34.9
Q ss_pred HHHHHHHccCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 122 PVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 122 ~l~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
.+.+.|.+.+++++++.|++|..++ ++.+...+|+++.||.||+++..
T Consensus 195 ~l~~~l~~~v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 195 ILEEKLKKHVNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGI 242 (449)
T ss_dssp HHHHHHTTTSEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCE
T ss_pred HHHHHHHhCcEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCC
Confidence 3445555557789999999998655 55433446778999999999864
No 162
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=78.23 E-value=4.1 Score=36.30 Aligned_cols=41 Identities=12% Similarity=0.032 Sum_probs=30.7
Q ss_pred cCCcccCceeEEEEecCCeeEEEEC---CC--cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVE---GG--KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~---~G--~~~~ad~VI~t~p~ 170 (383)
++++++++.|++|..+++...|++. +| +++.+|.||+++..
T Consensus 205 gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 205 RLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp SSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 6789999999999875332234443 66 57899999999875
No 163
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=78.11 E-value=2 Score=41.91 Aligned_cols=52 Identities=21% Similarity=0.034 Sum_probs=38.1
Q ss_pred HHHHHHHHc-----cCCcccCceeEEEEecCCeeE-EEECC---C--cEEEcCEEEEecChHH
Q 016772 121 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVK-VTVEG---G--KTFVADAVVVAVPLGV 172 (383)
Q Consensus 121 ~~l~~~L~~-----~l~I~l~~~V~~I~~~~~~v~-V~~~~---G--~~~~ad~VI~t~p~~~ 172 (383)
..+..+|++ +++|+++++|++|..++++|. |++.+ | ..++||.||.|+-+..
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 345555543 668999999999999888753 55542 3 4689999999997654
No 164
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=77.94 E-value=2.7 Score=40.62 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=35.0
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 357 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 357 (383)
+++.++++|.+||.+...+ ..+..|+..|..||..|.+.|.+.
T Consensus 476 ~~ts~p~VfA~GD~~~~~~-~~~~~A~~~g~~aa~~i~~~L~~~ 518 (521)
T 1hyu_A 476 CETSVKGVFAAGDCTTVPY-KQIIIATGEGAKASLSAFDYLIRT 518 (521)
T ss_dssp CBCSSTTEEECSTTBCCSS-CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEeecccCCCc-ceeeehHHhHHHHHHHHHHHHHhh
Confidence 3456789999999987643 478899999999999999887654
No 165
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=77.93 E-value=2.9 Score=40.46 Aligned_cols=42 Identities=17% Similarity=0.258 Sum_probs=34.0
Q ss_pred cCCcccCceeEEEEecCCe--eEEEECCCcEEEcCEEEEecChHH
Q 016772 130 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
+++++.+ +|++|..++++ +.|++.+|++++||.||.|.-...
T Consensus 179 gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 179 GVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp TCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred CCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 5678999 89999886554 468888888899999999987643
No 166
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=77.44 E-value=3.8 Score=36.26 Aligned_cols=50 Identities=22% Similarity=0.258 Sum_probs=34.8
Q ss_pred HHHHHHHHc-cCCcccCceeEEEEecCCee-EEEEC---CCc--EEEcCEEEEecCh
Q 016772 121 LPVINTLAK-GLDIRLGHRVTKITRHYIGV-KVTVE---GGK--TFVADAVVVAVPL 170 (383)
Q Consensus 121 ~~l~~~L~~-~l~I~l~~~V~~I~~~~~~v-~V~~~---~G~--~~~ad~VI~t~p~ 170 (383)
..+.+.+.+ +++|+++++|++|..+++++ .|+.. +|+ .+.||.||+++..
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 345555543 67899999999998775533 24332 564 6899999998853
No 167
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=77.34 E-value=2.6 Score=37.02 Aligned_cols=50 Identities=16% Similarity=0.296 Sum_probs=36.0
Q ss_pred HHHHHHHH--ccCCcccCceeEEEEecCCeeE-EEE--CCCc--EEEcCEEEEecCh
Q 016772 121 LPVINTLA--KGLDIRLGHRVTKITRHYIGVK-VTV--EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 121 ~~l~~~L~--~~l~I~l~~~V~~I~~~~~~v~-V~~--~~G~--~~~ad~VI~t~p~ 170 (383)
..+.+.+. .+++|+++++|++|..+++++. |+. .+|+ ++.+|.||+++..
T Consensus 186 ~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 186 PSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 34445543 2568999999999988775543 443 4775 7899999999875
No 168
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=77.33 E-value=2.2 Score=38.73 Aligned_cols=48 Identities=10% Similarity=0.227 Sum_probs=36.1
Q ss_pred HHHHHHc-c-CCcccCceeEEEEecCCeeEEEECCCcEEE-cCEEEEecCh
Q 016772 123 VINTLAK-G-LDIRLGHRVTKITRHYIGVKVTVEGGKTFV-ADAVVVAVPL 170 (383)
Q Consensus 123 l~~~L~~-~-l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~-ad~VI~t~p~ 170 (383)
+.+.|.+ + ++|++++.|++|..+++++.|++.+|+.+. +|.||+++..
T Consensus 220 l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 220 LGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGF 270 (369)
T ss_dssp HHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCB
T ss_pred HHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeecc
Confidence 3344443 3 789999999999877777778888887664 6999998764
No 169
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=76.93 E-value=2 Score=40.60 Aligned_cols=39 Identities=31% Similarity=0.357 Sum_probs=31.3
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCC--cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGG--KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G--~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|.. + ++.+++.+| +++.||.||+++..
T Consensus 226 gv~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 226 GIALHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp TCEEETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCCE
T ss_pred CCEEEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcCC
Confidence 578999999999986 3 466665456 57999999999875
No 170
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=76.14 E-value=2.7 Score=41.15 Aligned_cols=43 Identities=12% Similarity=-0.028 Sum_probs=33.0
Q ss_pred cCCcccCceeEEEEecCCeeE-EEEC---CCc--EEEcCEEEEecChHH
Q 016772 130 GLDIRLGHRVTKITRHYIGVK-VTVE---GGK--TFVADAVVVAVPLGV 172 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~-V~~~---~G~--~~~ad~VI~t~p~~~ 172 (383)
+++|+.+++|++|..++++|. |++. +|+ .++||.||+|+-+..
T Consensus 202 Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 202 GAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp TCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred CCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 568999999999998877643 5432 343 689999999997754
No 171
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=76.06 E-value=3.5 Score=36.86 Aligned_cols=42 Identities=21% Similarity=0.217 Sum_probs=33.9
Q ss_pred hCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 357 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 357 (383)
.+..+++|.+||.+... ......|+..|..||..|.+.|..+
T Consensus 277 ~t~~~~iya~GD~~~~~-~~~~~~A~~~g~~aA~~i~~~l~~~ 318 (335)
T 2a87_A 277 STSLPGVFAAGDLVDRT-YRQAVTAAGSGCAAAIDAERWLAEH 318 (335)
T ss_dssp BCSSTTEEECGGGTCCS-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeecCCcc-HHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 45578999999998763 3467889999999999999887643
No 172
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=75.99 E-value=2.4 Score=39.96 Aligned_cols=39 Identities=26% Similarity=0.475 Sum_probs=29.9
Q ss_pred CCCCCEEEeccccCCC-C-Cc-hhhHHHHHHHHHHHHHHHHH
Q 016772 316 IPVDNLFFAGEATSMS-Y-PG-SVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 316 ~p~~~l~faG~~~~~~-~-~g-~v~gA~~SG~~aA~~i~~~l 354 (383)
+++++||||||-+... + +| .+..|+.+|+.|++.+.+..
T Consensus 402 ~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~ 443 (447)
T 2i0z_A 402 KFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENA 443 (447)
T ss_dssp SSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 5789999999987631 1 12 56779999999999886654
No 173
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=75.95 E-value=3.3 Score=38.93 Aligned_cols=39 Identities=33% Similarity=0.394 Sum_probs=31.0
Q ss_pred cCCcccCceeEEEEecCCee-EEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+ +++ .|.+ +|+++.||.||+++..
T Consensus 205 gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 205 NITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGV 244 (447)
T ss_dssp TEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCE
T ss_pred CCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCC
Confidence 5689999999999876 444 4666 4568999999999864
No 174
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=75.82 E-value=4.5 Score=35.92 Aligned_cols=50 Identities=12% Similarity=0.069 Sum_probs=35.0
Q ss_pred HHHHHHHHc--cCCcccCceeEEEEecCCeeEEEEC---CCc--EEEcCEEEEecCh
Q 016772 121 LPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVE---GGK--TFVADAVVVAVPL 170 (383)
Q Consensus 121 ~~l~~~L~~--~l~I~l~~~V~~I~~~~~~v~V~~~---~G~--~~~ad~VI~t~p~ 170 (383)
..+.+.+.+ +++|+++++|++|..++....|++. +|+ ++.||.||+++..
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 455666653 6789999999999875332234443 664 6899999998854
No 175
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=75.79 E-value=2.9 Score=37.18 Aligned_cols=40 Identities=23% Similarity=0.276 Sum_probs=33.8
Q ss_pred cCCcccCceeEEEEecCCeeEEEE---CCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTV---EGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~---~~G~~~~ad~VI~t~p~ 170 (383)
++++++++ |++|..+++.+.+++ .++..+.+|+||+|+-.
T Consensus 98 gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 98 GTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp TCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCE
T ss_pred CCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCC
Confidence 56789998 999999888888887 36678999999999865
No 176
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=75.02 E-value=3.2 Score=36.50 Aligned_cols=41 Identities=20% Similarity=0.193 Sum_probs=33.4
Q ss_pred hCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
++..+++|.+||.+... ...+..|+..|..||..|.+.|..
T Consensus 266 ~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~ 306 (310)
T 1fl2_A 266 ETNVKGVFAAGDCTTVP-YKQIIIATGEGAKASLSAFDYLIR 306 (310)
T ss_dssp BCSSTTEEECSTTBSCS-SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeecccCCc-chhhhhhHhhHHHHHHHHHHHHHH
Confidence 45567999999998763 247788999999999999988754
No 177
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=74.72 E-value=3.7 Score=36.17 Aligned_cols=41 Identities=27% Similarity=0.383 Sum_probs=32.6
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
+++.++++|-|||.+...+ ..+.-|+..|..||..+.+.|.
T Consensus 272 ~~Ts~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 272 PKTSVDGVFACGDVCDRVY-RQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp TBCSSTTEEECSTTTCSSC-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEEeccCCcc-hHHHHHHHHHHHHHHHHHHHHh
Confidence 4677889999999887532 2567789999999999887764
No 178
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=74.33 E-value=2.4 Score=37.38 Aligned_cols=42 Identities=29% Similarity=0.255 Sum_probs=32.9
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
+++.++++|-|||.+...+ ..+.-|+..|..||..|.+.|.+
T Consensus 260 ~~Ts~p~IyA~GDv~~~~~-~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 260 GRTSEKNIYLAGETTTQGP-SSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp CBCSSTTEEECSHHHHTSC-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeccCCCcc-hHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567789999999876432 34667889999999999988864
No 179
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=74.23 E-value=3.7 Score=37.34 Aligned_cols=37 Identities=22% Similarity=0.391 Sum_probs=30.2
Q ss_pred CCEEEeccccCC---CCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 319 ~~l~faG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
+|++++||+.+. ..+.++.-|+.+|..+|+.|.+.+.
T Consensus 277 ~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~ 316 (397)
T 3oz2_A 277 PGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIE 316 (397)
T ss_dssp TTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 689999999664 3445899999999999998877654
No 180
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=74.15 E-value=2 Score=41.28 Aligned_cols=42 Identities=17% Similarity=0.266 Sum_probs=32.7
Q ss_pred cCCcccCceeEEEEec---CCeeEEEE--C-CC--cEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRH---YIGVKVTV--E-GG--KTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~---~~~v~V~~--~-~G--~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..+ ++++.|++ . +| .+++||.||.|+-..
T Consensus 180 gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 180 GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGK 229 (497)
T ss_dssp TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTT
T ss_pred CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCC
Confidence 5689999999999874 34567766 4 66 468999999998654
No 181
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=73.95 E-value=5.5 Score=39.03 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=30.0
Q ss_pred CCEEEeccccCC---CCCchhhHHHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 319 ~~l~faG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
+|++++||+.|. ..+.+++-|+++|..+|+.|.+.+
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~ 385 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQL 385 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHH
Confidence 689999999774 234589999999999999988765
No 182
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=73.26 E-value=4.8 Score=39.48 Aligned_cols=50 Identities=24% Similarity=0.174 Sum_probs=35.0
Q ss_pred HHHHHHHHc-----cCCcccCceeEEEEec-CCeeE-EE--E-CCCc--EEEcCEEEEecCh
Q 016772 121 LPVINTLAK-----GLDIRLGHRVTKITRH-YIGVK-VT--V-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 121 ~~l~~~L~~-----~l~I~l~~~V~~I~~~-~~~v~-V~--~-~~G~--~~~ad~VI~t~p~ 170 (383)
..+.+.|.+ +++|+++++|++|..+ +++|. |. . .+|+ .+.||+||+|+-.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 345555543 5689999999999985 55443 33 2 4665 5899999999865
No 183
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=73.18 E-value=4.3 Score=35.79 Aligned_cols=40 Identities=23% Similarity=0.211 Sum_probs=32.6
Q ss_pred hCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
.+..+++|.+||.+... ...+.-|+.+|..||..|.+.|.
T Consensus 275 ~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~ 314 (320)
T 1trb_A 275 QTSIPGVFAAGDVMDHI-YRQAITSAGTGCMAALDAERYLD 314 (320)
T ss_dssp BCSSTTEEECGGGGCSS-SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEcccccCCc-chhhhhhhccHHHHHHHHHHHHH
Confidence 45567999999998763 24678899999999999988774
No 184
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=73.13 E-value=2.4 Score=37.95 Aligned_cols=42 Identities=12% Similarity=0.177 Sum_probs=32.5
Q ss_pred HhCCCCCEEEec--cccCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAG--EATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 314 ~~~p~~~l~faG--~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
+.+..+++|.+| |.+.+ ....+.+|+..|+.+|+.|.+.|..
T Consensus 310 ~~t~~~~vya~Gd~d~~~~-~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWNGM-ASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BBSSCTTEEECSSCGGGST-TCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred cCCCCCCeEEecccccccc-chhhhhhhHHHHHHHHHHHHHHHHh
Confidence 345678999999 55553 2468889999999999999887643
No 185
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=73.10 E-value=5.7 Score=39.55 Aligned_cols=49 Identities=16% Similarity=0.194 Sum_probs=35.3
Q ss_pred HHHHHHHc-----cCCcccCceeEEEEecCCeeE---EEE-CCCc--EEEcCEEEEecCh
Q 016772 122 PVINTLAK-----GLDIRLGHRVTKITRHYIGVK---VTV-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 122 ~l~~~L~~-----~l~I~l~~~V~~I~~~~~~v~---V~~-~~G~--~~~ad~VI~t~p~ 170 (383)
.|.+.|.+ +++|+.+++|++|..++++|. +.. .+|+ .+.||+||+|+--
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 45555544 568999999999988766543 322 5675 4899999999854
No 186
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=72.75 E-value=4 Score=36.85 Aligned_cols=41 Identities=22% Similarity=0.319 Sum_probs=31.6
Q ss_pred cCCcccCceeEEEEecCCee-EEEE--CCC--cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGV-KVTV--EGG--KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v-~V~~--~~G--~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+++++ .|++ .+| +.+.+|.||+++..
T Consensus 216 gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 216 TIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp SEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred ceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 36799999999999876654 3443 477 57899999999874
No 187
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=72.35 E-value=5.4 Score=37.87 Aligned_cols=39 Identities=26% Similarity=0.329 Sum_probs=30.6
Q ss_pred cCCcccCceeEEEEecCCee-EEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|..+ +++ .|.+. +.++.||.||+++..
T Consensus 241 Gv~i~~~~~v~~i~~~-~~v~~v~~~-~~~i~~D~vi~a~G~ 280 (480)
T 3cgb_A 241 HIEILTNENVKAFKGN-ERVEAVETD-KGTYKADLVLVSVGV 280 (480)
T ss_dssp TCEEECSCCEEEEEES-SBEEEEEET-TEEEECSEEEECSCE
T ss_pred CcEEEcCCEEEEEEcC-CcEEEEEEC-CCEEEcCEEEECcCC
Confidence 6789999999999875 444 35554 447999999999865
No 188
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=72.31 E-value=2.9 Score=37.10 Aligned_cols=41 Identities=24% Similarity=0.246 Sum_probs=33.2
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
+++..+++|.+||..... ...++.|+..|+.||..|.+.|.
T Consensus 276 ~~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 276 QRTSVPGVYAAGDVTSGN-FAQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp CBCSSTTEEECSTTBTTC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEeecccCcc-hhhHHHHHHHHHHHHHHHHHHhh
Confidence 345578999999998763 34788999999999999988764
No 189
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=72.22 E-value=5.2 Score=39.57 Aligned_cols=50 Identities=18% Similarity=0.119 Sum_probs=36.0
Q ss_pred HHHHHHHHc-----cCCcccCceeEEEEecCCeeE-EE--E-CCCc--EEEcCEEEEecCh
Q 016772 121 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVK-VT--V-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 121 ~~l~~~L~~-----~l~I~l~~~V~~I~~~~~~v~-V~--~-~~G~--~~~ad~VI~t~p~ 170 (383)
..|.+.|.+ +++|+.+++|++|..++++|. |. + .+|+ .+.|++||+|+--
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 355666644 467999999999988776543 33 3 4675 6899999999854
No 190
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=71.85 E-value=4.3 Score=36.02 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=34.1
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
+++..+++|.+||.+... ...++.|+..|..||..|...+..
T Consensus 272 ~~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~ 313 (325)
T 2q7v_A 272 IYTNIPMLFAAGDVSDYI-YRQLATSVGAGTRAAMMTERQLAA 313 (325)
T ss_dssp TBCSSTTEEECSTTTCSS-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeecccCcc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678999999998752 357889999999999999988754
No 191
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=71.72 E-value=4.2 Score=36.20 Aligned_cols=40 Identities=30% Similarity=0.286 Sum_probs=33.6
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~ 171 (383)
++++++++ |+.|+.+++++.|++ +|+++++|+||+|+-..
T Consensus 84 gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 84 GTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp TCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred CCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 46788887 999998888888887 77789999999998653
No 192
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=71.39 E-value=4.7 Score=38.65 Aligned_cols=45 Identities=16% Similarity=0.091 Sum_probs=33.2
Q ss_pred HHHHccC--CcccCceeEEEEecCC--------eeEEEECCC-----cEEEcCEEEEecC
Q 016772 125 NTLAKGL--DIRLGHRVTKITRHYI--------GVKVTVEGG-----KTFVADAVVVAVP 169 (383)
Q Consensus 125 ~~L~~~l--~I~l~~~V~~I~~~~~--------~v~V~~~~G-----~~~~ad~VI~t~p 169 (383)
+..++.+ .|+++++|++|.+.+. .++|++.++ +++.|++||+++.
T Consensus 152 ~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG 211 (501)
T 4b63_A 152 RWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIG 211 (501)
T ss_dssp HHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCC
T ss_pred HHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcC
Confidence 3334555 4899999999987542 377877543 3689999999987
No 193
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=70.73 E-value=5.2 Score=38.08 Aligned_cols=41 Identities=29% Similarity=0.239 Sum_probs=30.6
Q ss_pred cCCcccCceeEEEEecC-CeeEEEECC---Cc--EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHY-IGVKVTVEG---GK--TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~-~~v~V~~~~---G~--~~~ad~VI~t~p~ 170 (383)
+++|++++.|++|...+ +.+.|++.+ |+ ++.||.||+++..
T Consensus 239 gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 239 GTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp TCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC
Confidence 56899999999998744 445565543 54 4789999999864
No 194
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=70.34 E-value=6.2 Score=39.12 Aligned_cols=40 Identities=28% Similarity=0.200 Sum_probs=31.3
Q ss_pred CcccCceeEEEEecCC----eeEEEEC------CC--cEEEcCEEEEecChH
Q 016772 132 DIRLGHRVTKITRHYI----GVKVTVE------GG--KTFVADAVVVAVPLG 171 (383)
Q Consensus 132 ~I~l~~~V~~I~~~~~----~v~V~~~------~G--~~~~ad~VI~t~p~~ 171 (383)
+|+++++|++|..+++ +|.|++. +| ++++||+||.|.-..
T Consensus 159 ~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~ 210 (639)
T 2dkh_A 159 EPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGAR 210 (639)
T ss_dssp CCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTT
T ss_pred EEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcc
Confidence 8999999999998753 5777654 46 578999999987553
No 195
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=69.80 E-value=5.9 Score=35.33 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=32.1
Q ss_pred cCCcccCceeEEEEecCCeeEE-EECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKV-TVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V-~~~~G~~~~ad~VI~t~p~ 170 (383)
++++++++ |++|+. ++.+.| .+.+|+++.+|+||+|+-.
T Consensus 85 ~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~ 124 (335)
T 2a87_A 85 GADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGA 124 (335)
T ss_dssp TCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCE
T ss_pred CCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCC
Confidence 46788887 999987 566777 7888888999999999865
No 196
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=69.07 E-value=5.1 Score=38.08 Aligned_cols=41 Identities=24% Similarity=0.349 Sum_probs=34.2
Q ss_pred cCCcccCceeEEEEecCCeeEEEE-CCCc--EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~t~p~ 170 (383)
++++++++.|+.|+.+++.|.+.+ .+|+ ++.+|+||+|+-.
T Consensus 107 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp CCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 578899999999998888887776 4576 7999999999864
No 197
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=68.21 E-value=6 Score=38.94 Aligned_cols=40 Identities=25% Similarity=0.042 Sum_probs=31.1
Q ss_pred CCcccCceeEEEEecCCee---EEEE-CCCc--EEEcCEEEEecCh
Q 016772 131 LDIRLGHRVTKITRHYIGV---KVTV-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 131 l~I~l~~~V~~I~~~~~~v---~V~~-~~G~--~~~ad~VI~t~p~ 170 (383)
++|+++++|++|..++++| .+.. .+|+ .+.||.||+|+-.
T Consensus 150 v~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 150 IQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp EEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred cEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 6799999999999877754 2332 5776 6899999999855
No 198
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=68.11 E-value=4.7 Score=38.67 Aligned_cols=44 Identities=18% Similarity=0.252 Sum_probs=31.0
Q ss_pred HHHHHc-cCCcccCceeEEEEecCCeeE--EEECCC----cEEEcCEEEEecC
Q 016772 124 INTLAK-GLDIRLGHRVTKITRHYIGVK--VTVEGG----KTFVADAVVVAVP 169 (383)
Q Consensus 124 ~~~L~~-~l~I~l~~~V~~I~~~~~~v~--V~~~~G----~~~~ad~VI~t~p 169 (383)
.+.|.+ +++|++|++|++|+. +++. +...+| +++.||.||.|+-
T Consensus 279 ~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa~G 329 (502)
T 4g6h_A 279 QSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWATG 329 (502)
T ss_dssp HHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEECCC
T ss_pred HHHHHhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEccC
Confidence 334433 678999999999964 4443 445566 3689999999874
No 199
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=67.57 E-value=6.7 Score=31.28 Aligned_cols=40 Identities=18% Similarity=0.097 Sum_probs=31.8
Q ss_pred hCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
++..+++|.+||...... ..++.|+..|..||..|...+.
T Consensus 132 ~t~~~~i~a~GD~~~~~~-~~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 132 RTSYPRVYAAGVARGKVP-GHAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp BCSSTTEEECGGGGTCCS-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCEEEeecccCcch-hhHHHHHHhHHHHHHHHHHHhh
Confidence 345679999999987632 2678899999999999987764
No 200
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=66.95 E-value=8.4 Score=36.09 Aligned_cols=46 Identities=24% Similarity=0.398 Sum_probs=35.2
Q ss_pred HHHHHHHHc-cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 121 LPVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 121 ~~l~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
..+.+.|.+ ++++++++.|++++. + .|++.+|+++.||.||+++..
T Consensus 192 ~~~~~~l~~~gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 192 QPILDELDKREIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp HHHHHHHHHTTCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHhhccceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEece
Confidence 445555544 678999999999852 3 366788999999999999853
No 201
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=66.68 E-value=4.8 Score=37.68 Aligned_cols=39 Identities=26% Similarity=0.345 Sum_probs=32.5
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|+.|+.++. .|++.+|+++.+|+||+|+-.
T Consensus 74 gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 74 NIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGG 112 (431)
T ss_dssp TEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCC
Confidence 568999999999987655 466678888999999999865
No 202
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=66.32 E-value=5.5 Score=36.94 Aligned_cols=39 Identities=28% Similarity=0.445 Sum_probs=32.8
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|+.|+.... .|++.+|+.+.+|++|+|+-.
T Consensus 71 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~ 109 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGS 109 (410)
T ss_dssp TCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCC
Confidence 678999999999987655 466788889999999999864
No 203
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=66.03 E-value=4.5 Score=37.74 Aligned_cols=47 Identities=15% Similarity=0.010 Sum_probs=32.8
Q ss_pred HHHHHHHc-cCCcccCceeEEEEecCCeeEEEEC--CCcEEEcCEEEEecCh
Q 016772 122 PVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVE--GGKTFVADAVVVAVPL 170 (383)
Q Consensus 122 ~l~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~--~G~~~~ad~VI~t~p~ 170 (383)
.+.+.|.+ +++|+++++|++|+. +++.+... +|+++.||.||++++.
T Consensus 205 ~l~~~l~~~GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 205 LVEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHCCCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCCC
Confidence 34445544 678999999999964 45555432 2678999999998653
No 204
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=65.85 E-value=5.7 Score=36.79 Aligned_cols=39 Identities=18% Similarity=0.245 Sum_probs=31.9
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|+.|+.++. .|++.+|+++.+|++|+|+-.
T Consensus 73 ~v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 73 EVEWLLGVTAQSFDPQAH--TVALSDGRTLPYGTLVLATGA 111 (408)
T ss_dssp SCEEEETCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCC
Confidence 467899999999987654 466678888999999999865
No 205
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=65.64 E-value=4.9 Score=39.07 Aligned_cols=41 Identities=22% Similarity=0.400 Sum_probs=34.0
Q ss_pred HhC-CCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 314 LRI-PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 314 ~~~-p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
+.+ .+.+||-|||... |.|++-.|..+|.++|+.|++.+..
T Consensus 503 ~~~~~~~gly~~GegaG--~a~gi~~Aa~~G~~~a~~i~~~~~~ 544 (549)
T 3nlc_A 503 FQSVNLKGFYPAGEGAG--YAGGILSAGIDGIKVAEAVARDIVA 544 (549)
T ss_dssp TSCTTCBTEEECHHHHT--SCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceECCcCCEEEccccCC--hhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 344 4789999999874 4789999999999999999988753
No 206
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=65.04 E-value=3.6 Score=41.23 Aligned_cols=46 Identities=24% Similarity=0.260 Sum_probs=32.8
Q ss_pred HHHHHHc-cCCcccCceeEEEEecCCeeEEEE---CCCcEEEcCEEEEecCh
Q 016772 123 VINTLAK-GLDIRLGHRVTKITRHYIGVKVTV---EGGKTFVADAVVVAVPL 170 (383)
Q Consensus 123 l~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~---~~G~~~~ad~VI~t~p~ 170 (383)
+.+.|.+ +++|+++++|++|.. +++.+.. .+++++.||.||+++..
T Consensus 573 l~~~l~~~GV~i~~~~~V~~i~~--~~~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 573 IQRRLIENGVARVTDHAVVAVGA--GGVTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp HHHHHHHTTCEEEESEEEEEEET--TEEEEEETTTCCEEEEECSEEEEESCE
T ss_pred HHHHHHHCCCEEEcCcEEEEEEC--CeEEEEEccCCeEEEEECCEEEECCCC
Confidence 4444433 678999999999974 3455543 35567999999999865
No 207
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=63.37 E-value=10 Score=35.41 Aligned_cols=48 Identities=15% Similarity=0.072 Sum_probs=34.6
Q ss_pred HHHHHH-HHc-cCCcccCceeEEEEecCCeeEEEECCC--cEEEcCEEEEecCh
Q 016772 121 LPVINT-LAK-GLDIRLGHRVTKITRHYIGVKVTVEGG--KTFVADAVVVAVPL 170 (383)
Q Consensus 121 ~~l~~~-L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~G--~~~~ad~VI~t~p~ 170 (383)
..+++. |.+ ++++++|+.|++|+ ++++.+...+| +++.||.||++++.
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccC
Confidence 344443 333 78999999999985 45666666554 47899999999764
No 208
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=63.11 E-value=4.3 Score=38.77 Aligned_cols=39 Identities=15% Similarity=0.278 Sum_probs=32.2
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|++|+..+. +|++.+|+++.+|++|+|+-.
T Consensus 104 gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 104 GVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGG 142 (493)
T ss_dssp EEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCE
T ss_pred CeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCC
Confidence 567899999999987655 466778888999999999854
No 209
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=63.10 E-value=4.6 Score=38.49 Aligned_cols=41 Identities=15% Similarity=0.077 Sum_probs=32.5
Q ss_pred cCCcccCceeEEEEecCCeeEEE-ECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVT-VEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~-~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|+.|+.+++.|.+. ..+++++.+|+||+|+-.
T Consensus 106 gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 106 GAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp TCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCC
Confidence 57788999999999887777775 222457999999999864
No 210
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=62.66 E-value=6.6 Score=38.06 Aligned_cols=41 Identities=22% Similarity=0.252 Sum_probs=33.3
Q ss_pred cCCcccCceeEEEEecCCeeEEEE-CCCc--EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~t~p~ 170 (383)
+++++++++|++|+.+++.+.+.. .+|+ .+.+|+||+|+-.
T Consensus 72 ~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 72 NVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp CCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCC
Confidence 577899999999999888887765 2343 7899999999854
No 211
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=61.78 E-value=8.4 Score=36.89 Aligned_cols=44 Identities=20% Similarity=0.202 Sum_probs=31.8
Q ss_pred HHcc-CCcccCceeEEEEecC-C-eeE-EEE--CCC-----cEEEcCEEEEecCh
Q 016772 127 LAKG-LDIRLGHRVTKITRHY-I-GVK-VTV--EGG-----KTFVADAVVVAVPL 170 (383)
Q Consensus 127 L~~~-l~I~l~~~V~~I~~~~-~-~v~-V~~--~~G-----~~~~ad~VI~t~p~ 170 (383)
..++ ++|++++.|++|..++ + +++ |.+ .+| .++.|+.||+++-.
T Consensus 232 ~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~ 286 (504)
T 1n4w_A 232 LGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGS 286 (504)
T ss_dssp HHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHH
T ss_pred HhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCC
Confidence 3343 7899999999999875 3 333 544 366 35889999999854
No 212
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=61.69 E-value=9.4 Score=36.70 Aligned_cols=41 Identities=12% Similarity=0.173 Sum_probs=34.1
Q ss_pred cCCcccCceeEEEEecC---CeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHY---IGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~---~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|+.|..+. +.+.|++.+|+.+.+|+||+|+-.
T Consensus 281 gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~ 324 (521)
T 1hyu_A 281 DVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGA 324 (521)
T ss_dssp CEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCE
T ss_pred CCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCC
Confidence 45789999999998642 357888888988999999999875
No 213
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=61.63 E-value=6 Score=36.08 Aligned_cols=36 Identities=17% Similarity=0.269 Sum_probs=29.3
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++|+++++|++|. .++ |++.+|+ +.+|.||+++..
T Consensus 197 gV~i~~~~~v~~i~--~~~--v~~~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 197 GVKFFLNSELLEAN--EEG--VLTNSGF-IEGKVKICAIGI 232 (367)
T ss_dssp TEEEECSCCEEEEC--SSE--EEETTEE-EECSCEEEECCE
T ss_pred CCEEEcCCEEEEEE--eeE--EEECCCE-EEcCEEEECcCC
Confidence 56899999999997 233 6667887 999999999864
No 214
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=60.27 E-value=7.4 Score=37.69 Aligned_cols=39 Identities=28% Similarity=0.354 Sum_probs=28.9
Q ss_pred CCCCCEEEeccccCCC-C------CchhhHHHHHHHHHHHHHHHHH
Q 016772 316 IPVDNLFFAGEATSMS-Y------PGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 316 ~p~~~l~faG~~~~~~-~------~g~v~gA~~SG~~aA~~i~~~l 354 (383)
+++++||.|||..+.+ + +.++-.|+..|++|++.+.+.+
T Consensus 365 t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 365 TDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 7899999999987321 1 1256668889999999876543
No 215
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=60.27 E-value=9.1 Score=36.66 Aligned_cols=46 Identities=30% Similarity=0.191 Sum_probs=32.4
Q ss_pred HHHc-cCCcccCceeEEEEecC-C-eeE-EEEC--CC-----cEEEcCEEEEecChH
Q 016772 126 TLAK-GLDIRLGHRVTKITRHY-I-GVK-VTVE--GG-----KTFVADAVVVAVPLG 171 (383)
Q Consensus 126 ~L~~-~l~I~l~~~V~~I~~~~-~-~v~-V~~~--~G-----~~~~ad~VI~t~p~~ 171 (383)
+..+ +++|++++.|++|..++ + +++ |.+. +| .++.|+.||+++-.-
T Consensus 236 a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 236 AAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp HHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHH
T ss_pred HHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCcc
Confidence 3344 37899999999999876 3 333 5442 56 358899999987543
No 216
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=59.98 E-value=9.2 Score=37.32 Aligned_cols=41 Identities=20% Similarity=0.252 Sum_probs=33.8
Q ss_pred cCCcccCceeEEEEecCCeeEEEE-CCCc--EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~t~p~ 170 (383)
+++++++++|++|+.+++.+.+.. .+|+ .+.+|+||+|+-.
T Consensus 107 gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 107 NLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp TCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCC
Confidence 567899999999999888888765 4565 6899999999864
No 217
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=59.59 E-value=9.7 Score=35.65 Aligned_cols=41 Identities=17% Similarity=0.187 Sum_probs=33.1
Q ss_pred cCCcccCceeEEEEecCCeeEEEE-CCCc--EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~t~p~ 170 (383)
++++++++.|+.|+.+++.|.+.. .+|+ ++.+|++|+|+-.
T Consensus 70 gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 70 GVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp TCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCC
Confidence 678889999999998888777765 4464 3899999999854
No 218
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=59.54 E-value=15 Score=36.43 Aligned_cols=42 Identities=26% Similarity=0.356 Sum_probs=30.5
Q ss_pred hCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
.+++++||-|||..........-+++..|+.|++.+.+.+..
T Consensus 428 ~t~I~GLyAaGe~a~~~~~r~~~~sl~~G~~ag~~aa~~~~~ 469 (643)
T 1jnr_A 428 MTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRFILE 469 (643)
T ss_dssp BCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeCCEEeeeccccccccccchhHHHHHHHHHHHHHHHHhc
Confidence 478999999999876533333345777888888887776644
No 219
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=59.54 E-value=9 Score=35.73 Aligned_cols=37 Identities=22% Similarity=0.234 Sum_probs=29.2
Q ss_pred CCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 131 LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 131 l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
++++. .+|++|+.++.. |++.+|+++.+|++|+|+-.
T Consensus 71 v~~i~-~~v~~Id~~~~~--V~~~~g~~i~YD~LViAtG~ 107 (430)
T 3hyw_A 71 IEFIN-EKAESIDPDANT--VTTQSGKKIEYDYLVIATGP 107 (430)
T ss_dssp EEEEC-SCEEEEETTTTE--EEETTCCEEECSEEEECCCC
T ss_pred cEEEE-eEEEEEECCCCE--EEECCCCEEECCEEEEeCCC
Confidence 45544 479999877665 67789999999999999865
No 220
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=59.05 E-value=9.9 Score=35.88 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=32.7
Q ss_pred cCCcccCceeEEEEecCCeeEEEE-CCCc--EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~t~p~ 170 (383)
+++++++++|++|+.+++.+.+.. .+|+ .+.+|++|+++-.
T Consensus 80 gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 80 DVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp -CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCC
Confidence 457889999999998888887765 3454 7899999999864
No 221
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=58.29 E-value=11 Score=37.41 Aligned_cols=45 Identities=27% Similarity=0.338 Sum_probs=33.8
Q ss_pred HHHHHc-cCCcccCceeEEEEecCCeeEEEECCC--cEEEcCEEEEecChH
Q 016772 124 INTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGG--KTFVADAVVVAVPLG 171 (383)
Q Consensus 124 ~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~G--~~~~ad~VI~t~p~~ 171 (383)
.+.|.+ +++|++++.|++|. ++++.++ .+| +++.||.||+++...
T Consensus 580 ~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 580 RTTLLSRGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEE
T ss_pred HHHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCcc
Confidence 344543 78899999999997 4566665 567 578999999998753
No 222
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=58.13 E-value=5.9 Score=37.63 Aligned_cols=48 Identities=19% Similarity=0.043 Sum_probs=32.9
Q ss_pred HHHHHHHc-cCCcccCceeEEEEecCCeeE-EE--ECCCcEEEcCEEEEecChH
Q 016772 122 PVINTLAK-GLDIRLGHRVTKITRHYIGVK-VT--VEGGKTFVADAVVVAVPLG 171 (383)
Q Consensus 122 ~l~~~L~~-~l~I~l~~~V~~I~~~~~~v~-V~--~~~G~~~~ad~VI~t~p~~ 171 (383)
.|.+.+.+ +++|+.+++| +|..+++++. |. +.+| .+.||.||+|+-..
T Consensus 124 ~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 124 FLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL-VEDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEE-ECCCSEEEECCCCC
T ss_pred HHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCC-eEEeeeEEECCCCC
Confidence 34444422 5789999999 9988777653 33 3344 57899999998653
No 223
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=57.57 E-value=12 Score=36.19 Aligned_cols=48 Identities=13% Similarity=0.180 Sum_probs=34.6
Q ss_pred HHHHHHc--cCCcccCceeEEEEecCCeeE-EEECC---Cc--EE---EcCEEEEecCh
Q 016772 123 VINTLAK--GLDIRLGHRVTKITRHYIGVK-VTVEG---GK--TF---VADAVVVAVPL 170 (383)
Q Consensus 123 l~~~L~~--~l~I~l~~~V~~I~~~~~~v~-V~~~~---G~--~~---~ad~VI~t~p~ 170 (383)
+.+.+.+ +++|++++.|++|..+++++. |.+.+ |+ ++ .++.||+++-.
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~ 259 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGA 259 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCCh
Confidence 5555543 578999999999998876654 55543 63 33 88999999754
No 224
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=57.18 E-value=10 Score=35.00 Aligned_cols=38 Identities=34% Similarity=0.393 Sum_probs=32.0
Q ss_pred CCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHH
Q 016772 317 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 317 p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
..+|+|.+||.+....+...+.|...|..+|+.|...+
T Consensus 298 ~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp SCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 46799999999975445678899999999999998876
No 225
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=56.89 E-value=9.3 Score=35.35 Aligned_cols=36 Identities=25% Similarity=0.421 Sum_probs=27.3
Q ss_pred CCCCCEEEeccccCCC-C-Cc-hhhHHHHHHHHHHHHHH
Q 016772 316 IPVDNLFFAGEATSMS-Y-PG-SVHGAFSTGLMAAEDCR 351 (383)
Q Consensus 316 ~p~~~l~faG~~~~~~-~-~g-~v~gA~~SG~~aA~~i~ 351 (383)
+.+++||||||-..-. + +| .++.|+.||..|++.+.
T Consensus 361 ~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 361 NQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 4578999999987641 1 22 56789999999998763
No 226
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=56.77 E-value=7.5 Score=35.43 Aligned_cols=38 Identities=26% Similarity=0.295 Sum_probs=30.4
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|+.|+.+.. .|+ .+|+++.+|++|+|+-.
T Consensus 74 ~v~~~~g~~v~~id~~~~--~V~-~~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGRK--VVI-TEKGEVPYDTLVLATGA 111 (367)
T ss_dssp TEEEECSCCEEEEETTTT--EEE-ESSCEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCC--EEE-ECCcEEECCEEEECCCC
Confidence 568899999999987643 354 56778999999999864
No 227
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=56.61 E-value=6.1 Score=37.13 Aligned_cols=41 Identities=15% Similarity=0.146 Sum_probs=33.0
Q ss_pred cCCcccCceeEEEEecCCeeEEEE-CCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTV-EGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~-~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|++|+.+++.+.++. .+++.+.+|++|+|+-.
T Consensus 72 gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 72 KIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp TEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCC
T ss_pred CCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCc
Confidence 456889999999999888877752 34567999999999865
No 228
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=56.05 E-value=8.1 Score=34.72 Aligned_cols=39 Identities=26% Similarity=0.307 Sum_probs=29.3
Q ss_pred CCCCEEEeccccC-----CCCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 317 PVDNLFFAGEATS-----MSYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 317 p~~~l~faG~~~~-----~~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
-+++||++|.+.. +..+-..-|-+.||++||+.|++.+.
T Consensus 282 ~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 3589999998752 22223566778999999999998874
No 229
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=54.37 E-value=8.6 Score=35.59 Aligned_cols=39 Identities=15% Similarity=0.240 Sum_probs=32.2
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|+.|+..+. .|++.+|+.+.+|++|+|+-.
T Consensus 79 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 79 AVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp TEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCE
T ss_pred CcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCC
Confidence 567999999999987654 466788889999999999853
No 230
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=52.68 E-value=11 Score=35.20 Aligned_cols=41 Identities=22% Similarity=0.289 Sum_probs=33.0
Q ss_pred cCCcccCceeEEEEecCCeeEEEEC-C--CcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVE-G--GKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~-~--G~~~~ad~VI~t~p~ 170 (383)
+++++++++|+.|+.+++.|.+... + ++++.+|++|+|+-.
T Consensus 72 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 72 GANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp TCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCC
Confidence 5788899999999988787777652 2 457999999999864
No 231
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=52.51 E-value=15 Score=32.06 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=28.1
Q ss_pred cccCceeEEEEecC-CeeEEEECCCcEEEcCEEEEecCh
Q 016772 133 IRLGHRVTKITRHY-IGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 133 I~l~~~V~~I~~~~-~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
..++..|..+...+ +.+.|.+.+|+++++|+||+|+-.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 77 HYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGM 115 (304)
T ss_dssp EEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCC
T ss_pred EEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCC
Confidence 34455666665544 446788999999999999999864
No 232
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=52.25 E-value=15 Score=34.08 Aligned_cols=43 Identities=14% Similarity=0.138 Sum_probs=33.9
Q ss_pred HhC-CCCCEEEeccccCCC----------CCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 314 LRI-PVDNLFFAGEATSMS----------YPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 314 ~~~-p~~~l~faG~~~~~~----------~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
+++ ..+|+|.+||.+... .+-+.+.|+..|..+|+.|.+.|..
T Consensus 281 l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g 334 (430)
T 3h28_A 281 FQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp SBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 444 468999999998753 1346788999999999999988753
No 233
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=52.10 E-value=19 Score=32.93 Aligned_cols=42 Identities=19% Similarity=0.122 Sum_probs=33.7
Q ss_pred CCCCCEEEeccccCC-CCCchhhHHHHHHHHHHHHHHHHHHHH
Q 016772 316 IPVDNLFFAGEATSM-SYPGSVHGAFSTGLMAAEDCRMRVLER 357 (383)
Q Consensus 316 ~p~~~l~faG~~~~~-~~~g~v~gA~~SG~~aA~~i~~~l~~~ 357 (383)
+..+|+|-+||.+.. ..+-+.+.|...|..+|+.|++.|..+
T Consensus 284 t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~ 326 (401)
T 3vrd_B 284 SLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGE 326 (401)
T ss_dssp SSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 346799999998754 344578899999999999999988643
No 234
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=51.17 E-value=15 Score=34.28 Aligned_cols=45 Identities=18% Similarity=0.179 Sum_probs=31.9
Q ss_pred HHHHHHc-cCCcccCceeEEEEecCCeeEEEE--CC-----CcEEEcCEEEEecC
Q 016772 123 VINTLAK-GLDIRLGHRVTKITRHYIGVKVTV--EG-----GKTFVADAVVVAVP 169 (383)
Q Consensus 123 l~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~--~~-----G~~~~ad~VI~t~p 169 (383)
+.+.|.+ ++++++++.|++|+. +++.+.. .+ |+++.+|.||++++
T Consensus 214 ~~~~l~~~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 214 LTKGLKEEGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHTTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHCCCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCC
Confidence 3344444 678999999999963 4555543 33 45789999999865
No 235
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=49.21 E-value=30 Score=30.04 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=28.7
Q ss_pred ccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 134 RLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 134 ~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
.....|..+....+...+.+.++.++.+|+||+|+-.
T Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 83 IITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGA 119 (314)
T ss_dssp EECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCE
T ss_pred EEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccc
Confidence 3445677777777777777888889999999999864
No 236
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=47.64 E-value=11 Score=35.11 Aligned_cols=34 Identities=29% Similarity=0.651 Sum_probs=24.3
Q ss_pred CCCCCEEEeccccCCC-C-Cc-hhhHHHHHHHHHHHH
Q 016772 316 IPVDNLFFAGEATSMS-Y-PG-SVHGAFSTGLMAAED 349 (383)
Q Consensus 316 ~p~~~l~faG~~~~~~-~-~g-~v~gA~~SG~~aA~~ 349 (383)
.-+++||||||-..-. + +| .++-|..||..|++.
T Consensus 380 k~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 380 KEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TTSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 3468999999775531 1 12 678899999988764
No 237
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=47.39 E-value=19 Score=33.67 Aligned_cols=39 Identities=31% Similarity=0.463 Sum_probs=30.8
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCC-cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGG-KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G-~~~~ad~VI~t~p~ 170 (383)
+++++++++|+.|+.. ...|.+.+| ..+.+|+||+|+-.
T Consensus 73 gi~v~~~~~v~~i~~~--~~~v~~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 73 GIDLHLNAEVIEVDTG--YVRVRENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp TCEEETTCEEEEECSS--EEEEECSSSEEEEECSEEEECCCE
T ss_pred CcEEEecCEEEEEecC--CCEEEECCceEEEEcCEEEECCCC
Confidence 5679999999999653 456777777 47999999999864
No 238
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=47.04 E-value=28 Score=36.57 Aligned_cols=42 Identities=12% Similarity=0.151 Sum_probs=34.4
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 357 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 357 (383)
+++..+++|.+||.+.. ...+..|+..|+.||+.|...|...
T Consensus 469 ~~Ts~~~VfA~GD~~~~--~~~~~~A~~~G~~aA~~i~~~L~~~ 510 (1025)
T 1gte_A 469 MQTSEPWVFAGGDIVGM--ANTTVESVNDGKQASWYIHKYIQAQ 510 (1025)
T ss_dssp CBCSSTTEEECSGGGCS--CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeCCCCCC--chHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34556799999999874 4588899999999999999887653
No 239
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=46.53 E-value=17 Score=34.48 Aligned_cols=38 Identities=29% Similarity=0.450 Sum_probs=31.1
Q ss_pred HHhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 313 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 313 ~~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
.+++..+++|.+||.+.. ....+.|+..|+.||+.|+.
T Consensus 300 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 300 TLQTSVDHIFVAGDANNT--LTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp TCBCSSTTEEECGGGGTS--SCSHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEEecCCC--CccHHHHHHHHHHHHHHHcC
Confidence 345667899999999876 35788999999999998874
No 240
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=46.46 E-value=25 Score=34.69 Aligned_cols=49 Identities=18% Similarity=0.131 Sum_probs=34.6
Q ss_pred HHHHHHHc--cC-CcccCceeEEEEecCC---eeE-EE--E-CCCc--EEEcCEEEEecCh
Q 016772 122 PVINTLAK--GL-DIRLGHRVTKITRHYI---GVK-VT--V-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 122 ~l~~~L~~--~l-~I~l~~~V~~I~~~~~---~v~-V~--~-~~G~--~~~ad~VI~t~p~ 170 (383)
.|.+++.+ ++ +|+.+++|++|..+++ +|. |. . .+|+ .+.|+.||+|+--
T Consensus 156 ~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 156 IIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp HHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 33444433 68 8999999999988766 653 32 2 4664 5899999998854
No 241
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=46.36 E-value=23 Score=35.13 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=31.7
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 357 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 357 (383)
..+.+++||-|||.......|..-.++..|+.++..+.+.+...
T Consensus 448 ~~t~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~~~~~~~ 491 (662)
T 3gyx_A 448 RMTTVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMVRWYLDH 491 (662)
T ss_dssp TBCSSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCccCCeEeCccccccccCccHhHHHHHHHHHHHHHHHHHhhC
Confidence 46789999999998754333445567777888888877776553
No 242
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=45.59 E-value=25 Score=31.70 Aligned_cols=23 Identities=17% Similarity=0.066 Sum_probs=17.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Q 016772 335 SVHGAFSTGLMAAEDCRMRVLER 357 (383)
Q Consensus 335 ~v~gA~~SG~~aA~~i~~~l~~~ 357 (383)
..-|-+.||++||+.|++.|..+
T Consensus 315 ~fg~m~~sg~~~a~~~~~~~~~~ 337 (344)
T 3jsk_A 315 TFGAMALSGVKAAHEAIRVFDLR 337 (344)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeeecCHHHHHHHHHHHHhh
Confidence 34455889999999999988654
No 243
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=45.51 E-value=18 Score=33.75 Aligned_cols=43 Identities=21% Similarity=0.112 Sum_probs=33.2
Q ss_pred HhC-CCCCEEEeccccCCC----------CCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 314 LRI-PVDNLFFAGEATSMS----------YPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 314 ~~~-p~~~l~faG~~~~~~----------~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
+++ ..+|+|.+||.+... .+-+...|...|..+|+.|.+.|..
T Consensus 292 l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g 345 (437)
T 3sx6_A 292 QRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEG 345 (437)
T ss_dssp SBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 344 468999999998743 1336788999999999999988753
No 244
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=45.30 E-value=17 Score=34.08 Aligned_cols=37 Identities=14% Similarity=0.072 Sum_probs=30.4
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. ....+.|+..|+.+|+.|+.
T Consensus 294 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 294 SRTSTPGIYALGDVTDR--VQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp CBCSSTTEEECSGGGSS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCEEEEEecCCC--CCChHHHHHHHHHHHHHHcC
Confidence 45667899999998874 45788999999999998863
No 245
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=45.15 E-value=29 Score=33.17 Aligned_cols=41 Identities=12% Similarity=0.074 Sum_probs=28.8
Q ss_pred cCCcccCceeEEEEecC----CeeEEE--ECCC-c--EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHY----IGVKVT--VEGG-K--TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~----~~v~V~--~~~G-~--~~~ad~VI~t~p~ 170 (383)
+++|++++.|++|...+ +++.|+ ..+| + .+.||.||+++..
T Consensus 264 GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 264 GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCE
T ss_pred CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCC
Confidence 56799999988887533 344443 4455 2 4689999999865
No 246
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=44.90 E-value=10 Score=36.88 Aligned_cols=38 Identities=21% Similarity=0.242 Sum_probs=28.8
Q ss_pred CCCCCEEEeccccCCCCC------chhhHHHHHHHHHHHHHHHH
Q 016772 316 IPVDNLFFAGEATSMSYP------GSVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 316 ~p~~~l~faG~~~~~~~~------g~v~gA~~SG~~aA~~i~~~ 353 (383)
+|+++||-||+.+...++ .++-.|+..|++|++.+.+.
T Consensus 524 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 524 QVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp CEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 689999999998654221 25666899999999987654
No 247
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=44.89 E-value=16 Score=35.50 Aligned_cols=38 Identities=26% Similarity=0.395 Sum_probs=29.1
Q ss_pred CCCCCEEEeccccCCCCC------chhhHHHHHHHHHHHHHHHH
Q 016772 316 IPVDNLFFAGEATSMSYP------GSVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 316 ~p~~~l~faG~~~~~~~~------g~v~gA~~SG~~aA~~i~~~ 353 (383)
+|+++||-||+.+...++ .++-.|+..|++|++.+.+.
T Consensus 519 ~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~ 562 (566)
T 1qo8_A 519 KPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKH 562 (566)
T ss_dssp CEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 689999999998754322 24667899999999987654
No 248
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=44.68 E-value=18 Score=33.96 Aligned_cols=37 Identities=22% Similarity=0.393 Sum_probs=30.5
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. ....+.|+..|+.||+.|+.
T Consensus 296 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 296 MKTNIPNVFATGDANGL--APYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp CBCSSTTEEECGGGTCS--CCSHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHhC
Confidence 45567899999999875 45788899999999998863
No 249
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=44.62 E-value=18 Score=33.28 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=31.0
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
++++++ ++|++|+.++.. |++.+|+.+.+|++|+++-.
T Consensus 71 ~i~~~~-~~v~~id~~~~~--v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 71 AIELIS-DRMVSIDREGRK--LLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp TEEEEC-CCEEEEETTTTE--EEESSSCEEECSEEEECCCE
T ss_pred CCEEEE-EEEEEEECCCCE--EEECCCCEEECCEEEEeeCC
Confidence 567778 999999876654 66778889999999999864
No 250
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=44.04 E-value=19 Score=33.99 Aligned_cols=37 Identities=14% Similarity=0.067 Sum_probs=30.0
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. +...+.|+..|+.||+.|+.
T Consensus 319 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 319 QNTNVKGIYAVGDVCGK--ALLTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp CBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHHS
T ss_pred cccCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHcC
Confidence 35667899999999844 45788999999999998864
No 251
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=43.94 E-value=22 Score=32.10 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=22.4
Q ss_pred CCCEEEeccccC---------CCCCchhhHHHHHHHHHHHHHHHH
Q 016772 318 VDNLFFAGEATS---------MSYPGSVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 318 ~~~l~faG~~~~---------~~~~g~v~gA~~SG~~aA~~i~~~ 353 (383)
+++||.+|-+.. +.++|-+-.....+..+.+.+-..
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~~ 337 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDLR 337 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHhh
Confidence 479999998733 445555555566666666655443
No 252
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=43.44 E-value=21 Score=34.41 Aligned_cols=48 Identities=19% Similarity=0.122 Sum_probs=33.2
Q ss_pred HHHHHHc--cCCcccCceeEEEEe-cCC------eeE-EEE---CCCc--EEEcCEEEEecCh
Q 016772 123 VINTLAK--GLDIRLGHRVTKITR-HYI------GVK-VTV---EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 123 l~~~L~~--~l~I~l~~~V~~I~~-~~~------~v~-V~~---~~G~--~~~ad~VI~t~p~ 170 (383)
|.+++.+ +++|+.+++|++|.. +++ +|. |.+ .+|+ .+.||.||+|+-.
T Consensus 144 L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 206 (540)
T 1chu_A 144 LVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGG 206 (540)
T ss_dssp CHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCC
T ss_pred HHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 3444443 568999999999987 434 443 433 3575 6899999999854
No 253
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=43.37 E-value=12 Score=36.35 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=28.5
Q ss_pred CCCCCEEEeccccCCCCC------chhhHHHHHHHHHHHHHHH
Q 016772 316 IPVDNLFFAGEATSMSYP------GSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 316 ~p~~~l~faG~~~~~~~~------g~v~gA~~SG~~aA~~i~~ 352 (383)
+|+++||-||+.+...++ .++-.|+..|++|++.+.+
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~ 567 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAK 567 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 789999999998653221 2566789999999998764
No 254
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=43.29 E-value=17 Score=35.14 Aligned_cols=44 Identities=11% Similarity=0.253 Sum_probs=32.4
Q ss_pred HHHHHc-cCCccc--CceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHH
Q 016772 124 INTLAK-GLDIRL--GHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 124 ~~~L~~-~l~I~l--~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
.++|.+ ++++.. +++|++|.. ++ |.+.+| .+++|.||+|+-...
T Consensus 345 ~~al~~~nV~lv~~~~~~I~~it~--~g--v~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 345 YETYNRDNVHLVDIREAPIQEVTP--EG--IKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp HHHTTSTTEEEEETTTSCEEEEET--TE--EEESSC-EEECSEEEECCCCBS
T ss_pred HHHhcCCCEEEEecCCCCceEEcc--Ce--EEeCCC-eeecCEEEECCcccc
Confidence 455554 445554 789999863 44 667899 899999999998754
No 255
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=43.01 E-value=20 Score=34.68 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=29.9
Q ss_pred cCCcccCceeEEEEecC-CeeE-EEEC-C--Cc--EEEcC-EEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHY-IGVK-VTVE-G--GK--TFVAD-AVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~-~~v~-V~~~-~--G~--~~~ad-~VI~t~p~ 170 (383)
+++|++++.|++|..++ +++. |.+. + |+ .+.|+ .||+++-.
T Consensus 223 ~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~ 271 (546)
T 2jbv_A 223 NFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGA 271 (546)
T ss_dssp TEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHH
T ss_pred CcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCc
Confidence 56799999999999876 5443 4432 2 53 68898 89988754
No 256
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=42.94 E-value=28 Score=32.43 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=30.7
Q ss_pred CCEEEeccccCC---CCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 319 ~~l~faG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
+|+.++||+.+. ..+.++..|+++|..+|+.|.+.+.
T Consensus 282 ~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~ 321 (453)
T 3atr_A 282 NGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFE 321 (453)
T ss_dssp TTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 689999999765 3456999999999999999877654
No 257
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=42.53 E-value=21 Score=33.80 Aligned_cols=38 Identities=11% Similarity=0.122 Sum_probs=30.4
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 353 (383)
+++.+++||.+||.+.. ....+.|+..|+.+|+.|+..
T Consensus 314 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 314 MTTNVSHIWAVGDVTGH--IQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp SBCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCEEEEEecCCC--CcCHHHHHHHHHHHHHHHcCC
Confidence 34567899999999874 357889999999999988753
No 258
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=42.43 E-value=21 Score=33.56 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=30.3
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..++||.+||.+.. +...+.|+..|+.||+.|+.
T Consensus 306 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 306 CATSVPGVYAIGDVVRG--AMLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEEccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 45667899999999854 34788999999999998863
No 259
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=41.96 E-value=22 Score=33.36 Aligned_cols=37 Identities=24% Similarity=0.351 Sum_probs=29.8
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. ....+.|+..|+.||+.|+.
T Consensus 297 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 297 MRTNVGHIYAIGDVNGL--LQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp SBCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEeECcCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 34557899999999875 35678899999999998863
No 260
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=41.60 E-value=15 Score=35.52 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=28.7
Q ss_pred CCccc--CceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHH
Q 016772 131 LDIRL--GHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 131 l~I~l--~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
+++.. +++|++|.. ++ |.+.+|+.+++|.||+|+-...
T Consensus 345 V~lv~~~~~~I~~it~--~g--v~~~dG~~~~~DvIV~ATGf~~ 384 (540)
T 3gwf_A 345 VEAVAIKENPIREVTA--KG--VVTEDGVLHELDVLVFATGFDA 384 (540)
T ss_dssp EEEEETTTSCEEEECS--SE--EEETTCCEEECSEEEECCCBSC
T ss_pred EEEEeCCCCCccEEec--Ce--EEcCCCCEEECCEEEECCccCc
Confidence 34443 688888853 44 6788998899999999997653
No 261
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=41.45 E-value=19 Score=34.18 Aligned_cols=37 Identities=19% Similarity=0.242 Sum_probs=30.1
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..++||.+||.+.. +...+.|+..|+.||+.|+.
T Consensus 326 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 326 FQTSIAGVYAIGDVVRG--PMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEecCCC--ccchhHHHHHHHHHHHHHcC
Confidence 44567899999998854 35889999999999998763
No 262
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=41.08 E-value=24 Score=33.17 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=30.5
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. ....+.|+..|+.||+.|+.
T Consensus 313 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 313 FNSKFPHIKVVGDVTFG--PMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 45667899999999875 35678999999999999874
No 263
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=40.25 E-value=24 Score=33.04 Aligned_cols=36 Identities=14% Similarity=0.150 Sum_probs=29.3
Q ss_pred hCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
++..+++|.+||.+.. ....+.|+..|+.+|+.|+.
T Consensus 292 ~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 292 NTNIEGIYAVGDNTGA--VELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp BCSSTTEEECSGGGTS--CCCHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 4556799999999764 35788899999999998864
No 264
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=40.17 E-value=24 Score=33.35 Aligned_cols=37 Identities=14% Similarity=0.068 Sum_probs=30.0
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. ....+.|+..|+.||+.|+.
T Consensus 310 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 310 QNTNVPNIYSLGDVVGK--VELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CBCSSTTEEECGGGTTS--SCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEecCCC--cccHHHHHHHHHHHHHHhcC
Confidence 35567899999999754 35788999999999998864
No 265
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=40.04 E-value=24 Score=33.29 Aligned_cols=38 Identities=18% Similarity=0.119 Sum_probs=30.0
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+... +...+.|+..|+.||+.|+.
T Consensus 314 ~~t~~~~IyA~GD~~~~~-~~~~~~A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 314 EATNVANIYAVGDIIYGK-PELTPVAVLAGRLLARRLYG 351 (483)
T ss_dssp CBCSSTTEEECSTTBTTS-CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEcccCCC-CccHHHHHHHHHHHHHHHcC
Confidence 456678999999997532 35788899999999998863
No 266
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=39.94 E-value=30 Score=32.18 Aligned_cols=41 Identities=15% Similarity=0.080 Sum_probs=32.6
Q ss_pred cCCcccCceeEEEEecCCeeEEEECC---CcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEG---GKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~---G~~~~ad~VI~t~p~ 170 (383)
+++++++++|++|+.+...+.+.... +..+.+|++|+|+-.
T Consensus 71 ~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs 114 (437)
T 4eqs_A 71 QITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGA 114 (437)
T ss_dssp CCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCE
T ss_pred CCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCC
Confidence 67789999999999888777765432 346899999999865
No 267
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=39.88 E-value=43 Score=29.94 Aligned_cols=51 Identities=8% Similarity=0.040 Sum_probs=33.0
Q ss_pred HHHHHHHHc--cCCcccCceeEEEEecC----C--eeE-EEE--------------CCCcEEEc---------------C
Q 016772 121 LPVINTLAK--GLDIRLGHRVTKITRHY----I--GVK-VTV--------------EGGKTFVA---------------D 162 (383)
Q Consensus 121 ~~l~~~L~~--~l~I~l~~~V~~I~~~~----~--~v~-V~~--------------~~G~~~~a---------------d 162 (383)
..|.+.+.+ +++|+.+++|+.+..++ + +|. |.+ .++.++.| |
T Consensus 150 ~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~ 229 (326)
T 2gjc_A 150 STVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHG 229 (326)
T ss_dssp HHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCC
T ss_pred HHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCC
Confidence 344444443 56799999999998773 3 433 322 13457899 9
Q ss_pred EEEEecChH
Q 016772 163 AVVVAVPLG 171 (383)
Q Consensus 163 ~VI~t~p~~ 171 (383)
.||.|+-..
T Consensus 230 ~VV~ATG~~ 238 (326)
T 2gjc_A 230 VILSTTGHD 238 (326)
T ss_dssp EEEECCCCC
T ss_pred EEEECcCCC
Confidence 999998643
No 268
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=39.56 E-value=18 Score=34.57 Aligned_cols=36 Identities=28% Similarity=0.226 Sum_probs=27.6
Q ss_pred CCCCCEEEeccccCCCC----C--chhhHHHHHHHHHHHHHH
Q 016772 316 IPVDNLFFAGEATSMSY----P--GSVHGAFSTGLMAAEDCR 351 (383)
Q Consensus 316 ~p~~~l~faG~~~~~~~----~--g~v~gA~~SG~~aA~~i~ 351 (383)
+|+++||-||+.+...+ . .++-.|+..|++|++.+.
T Consensus 466 ~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa 507 (510)
T 4at0_A 466 EPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAA 507 (510)
T ss_dssp SEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHH
Confidence 68999999999865422 1 256678999999998764
No 269
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=39.38 E-value=26 Score=33.14 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=29.9
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++.+++||.+||.+... +...+.|+..|+.||+.|+.
T Consensus 314 ~~t~~~~IyA~GD~~~~~-~~~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 314 EATSVPHIYAIGDVAEGR-PELTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp SBCSSTTEEECGGGBTTC-CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEeEEecCCC-CcchhHHHHHHHHHHHHHcC
Confidence 456678999999997532 34788899999999998863
No 270
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=39.16 E-value=49 Score=32.13 Aligned_cols=41 Identities=22% Similarity=0.156 Sum_probs=29.1
Q ss_pred cCCcccCceeEEEEec------C---CeeEEE--ECCCcEEE--cCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRH------Y---IGVKVT--VEGGKTFV--ADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~------~---~~v~V~--~~~G~~~~--ad~VI~t~p~ 170 (383)
+++|++++.|++|... + +++.|+ ..+|+.+. ||.||+++..
T Consensus 340 gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 340 GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGR 393 (598)
T ss_dssp TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCE
T ss_pred CCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCC
Confidence 6789999988888642 2 445443 45776655 9999999864
No 271
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=39.11 E-value=38 Score=33.59 Aligned_cols=36 Identities=11% Similarity=0.156 Sum_probs=27.4
Q ss_pred CCEEEeccccCC---CCCchhhHHHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 319 ~~l~faG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
+|++++||+.|. ..+.+++-|++.+...|..|...+
T Consensus 351 gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl 389 (665)
T 1pn0_A 351 ERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVL 389 (665)
T ss_dssp TTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHH
Confidence 689999999764 234589999999988887765543
No 272
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=38.99 E-value=21 Score=35.14 Aligned_cols=41 Identities=12% Similarity=0.208 Sum_probs=29.8
Q ss_pred cCCcccCceeEEEEecCC--e---eEEEE-CCCc--EEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYI--G---VKVTV-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~--~---v~V~~-~~G~--~~~ad~VI~t~p~ 170 (383)
+++|++++.|++|..+++ + |.+.. .+|+ ++.||.||+++-.
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~ 322 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGA 322 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCT
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCC
Confidence 578999999999998653 3 33333 3464 5789999999843
No 273
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=38.86 E-value=22 Score=33.50 Aligned_cols=37 Identities=19% Similarity=0.338 Sum_probs=29.9
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. ....+.|...|+.||+.|+.
T Consensus 308 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 308 FQTKIPNIYAIGDVVAG--PMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEeeecCCC--CccHHHHHHHHHHHHHHhcC
Confidence 34566899999999865 35778899999999998863
No 274
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=38.53 E-value=26 Score=33.47 Aligned_cols=38 Identities=13% Similarity=0.079 Sum_probs=30.4
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++.+++||.+||.+... ....+.|+..|+.||+.|+.
T Consensus 342 ~~Ts~~~IyA~GD~~~g~-~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 342 EQTNVPYIYAIGDILEDK-VELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp SBCSSTTEEECGGGBSSS-CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEeccCCC-CccHHHHHHHHHHHHHHHcC
Confidence 456678999999998432 35788999999999998863
No 275
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=38.13 E-value=14 Score=35.07 Aligned_cols=49 Identities=24% Similarity=0.211 Sum_probs=34.9
Q ss_pred HHHHHHHc----cCCcccCceeEEEEecCCeeEEEE-CCCc--EEEcCEEEEecCh
Q 016772 122 PVINTLAK----GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 122 ~l~~~L~~----~l~I~l~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~t~p~ 170 (383)
.+.+.+.+ ++++++++.|.+|..+++.+.+.+ .+|+ .+.+|++|+++-.
T Consensus 162 ~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 162 KVVEELVGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGA 217 (493)
T ss_dssp HHHHHHHHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCE
T ss_pred HHHHHHHHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCC
Confidence 44455443 346789999999988777666544 4554 6899999999864
No 276
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=37.98 E-value=22 Score=33.32 Aligned_cols=37 Identities=19% Similarity=0.212 Sum_probs=29.9
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. ....+-|+..|+.||+.|+.
T Consensus 305 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 305 FSTNVSGVYAIGDVIPG--PMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp CBCSSTTEEECSTTSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 45567899999999865 34678899999999998863
No 277
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=37.46 E-value=24 Score=33.03 Aligned_cols=37 Identities=32% Similarity=0.354 Sum_probs=29.9
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. ....+-|+..|+.||+.|+.
T Consensus 296 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 296 CRTSVPNIFAIGDIVPG--PALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTS
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 45667899999999875 34678899999999998863
No 278
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=37.14 E-value=28 Score=33.09 Aligned_cols=36 Identities=19% Similarity=0.161 Sum_probs=29.6
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 351 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~ 351 (383)
+++..+++|.+||.+.. ....+.|+..|+.||+.|+
T Consensus 318 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~ 353 (495)
T 2wpf_A 318 SRTNVPNIYAIGDITDR--LMLTPVAINEGAALVDTVF 353 (495)
T ss_dssp CBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhc
Confidence 45567899999999864 3578899999999999886
No 279
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=37.06 E-value=19 Score=32.93 Aligned_cols=39 Identities=15% Similarity=0.319 Sum_probs=30.6
Q ss_pred HhCCCCCEEEeccccCCC--CCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMS--YPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~--~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+... ..+.++.|+..|+.||+.|+.
T Consensus 253 ~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 253 METSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG 293 (385)
T ss_dssp CBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcC
Confidence 456678999999998632 235788999999999998863
No 280
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=36.78 E-value=28 Score=32.96 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=30.2
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. ....+.|+..|+.+|+.|+.
T Consensus 314 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 314 SKTNVDNIYAIGDVTDR--VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp CBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 45567899999999864 35788999999999998863
No 281
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=35.86 E-value=26 Score=32.83 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=29.8
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.... .....+.|+..|+.||+.|+.
T Consensus 302 ~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 302 FETSIPDVYAIGDVVDK-GPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp SBCSSTTEEECGGGBSS-SCSCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEeeccCCC-CCccHhHHHHHHHHHHHHHcC
Confidence 34566899999999872 235788899999999998863
No 282
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=35.85 E-value=35 Score=33.18 Aligned_cols=42 Identities=21% Similarity=0.264 Sum_probs=32.8
Q ss_pred cCCcccCceeEEEEecCC-eeE-EEEC------CC---------cEEEcCEEEEecChH
Q 016772 130 GLDIRLGHRVTKITRHYI-GVK-VTVE------GG---------KTFVADAVVVAVPLG 171 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~-~v~-V~~~------~G---------~~~~ad~VI~t~p~~ 171 (383)
+++|+++++|++|..+++ .|. |++. +| .+++||.||.|.-..
T Consensus 158 Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 158 GVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp TCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred CCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 568999999999998764 454 7665 33 579999999998653
No 283
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=35.71 E-value=31 Score=32.37 Aligned_cols=36 Identities=19% Similarity=0.108 Sum_probs=29.1
Q ss_pred hCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
++..+++|.+||.+.. ....+.|+..|+.+|+.|+.
T Consensus 291 ~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 291 NTNVPGVYALGDITGR--DQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp BCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 4556799999999764 35788899999999998863
No 284
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=35.61 E-value=26 Score=33.01 Aligned_cols=37 Identities=30% Similarity=0.506 Sum_probs=29.9
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. +...+.|+..|+.||+.|+.
T Consensus 312 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 312 MRTNVPHIYAIGDIVGQ--PMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp SBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEEcccCC--CccHHHHHHHHHHHHHHHcC
Confidence 45566899999999875 35678899999999998863
No 285
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=35.15 E-value=34 Score=33.30 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=29.9
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||..... ...++.|+..|+.||+.|+.
T Consensus 421 ~~ts~~~VyA~GD~~~~~-~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 421 EQTTVSNVYAIGDINAGK-PQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp SBCSSTTEEECGGGBTTS-CCCHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeeecCCC-CccHHHHHHhHHHHHHHHhc
Confidence 455678999999995442 34788999999999998864
No 286
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=34.92 E-value=27 Score=32.77 Aligned_cols=36 Identities=31% Similarity=0.356 Sum_probs=29.5
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 351 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~ 351 (383)
+++..+++|.+||.+.. +...+.|+..|+.+|+.|+
T Consensus 297 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~ 332 (467)
T 1zk7_A 297 MRTSNPNIYAAGDCTDQ--PQFVYVAAAAGTRAAINMT 332 (467)
T ss_dssp CBCSSTTEEECSTTBSS--CCCHHHHHHHHHHHHHHHT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHHc
Confidence 44567899999999875 3568889999999999875
No 287
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=34.79 E-value=27 Score=32.73 Aligned_cols=36 Identities=31% Similarity=0.492 Sum_probs=29.1
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 351 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~ 351 (383)
+++..+++|.+||.+.. ....+.|...|+.||+.|+
T Consensus 297 ~~t~~~~Iya~GD~~~~--~~l~~~A~~~g~~aa~~i~ 332 (464)
T 2eq6_A 297 METSVPGVYAIGDAARP--PLLAHKAMREGLIAAENAA 332 (464)
T ss_dssp CBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhc
Confidence 34556799999999865 3577889999999999886
No 288
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=34.32 E-value=28 Score=33.04 Aligned_cols=36 Identities=19% Similarity=0.165 Sum_probs=29.4
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 351 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~ 351 (383)
+++..+++|.+||.+.. ....+.|+..|+.+|+.|+
T Consensus 305 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~ 340 (499)
T 1xdi_A 305 SRTLATGIYAAGDCTGL--LPLASVAAMQGRIAMYHAL 340 (499)
T ss_dssp SBCSSTTEEECSGGGTS--CSCHHHHHHHHHHHHHHHT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhc
Confidence 45567899999999875 3467889999999999876
No 289
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=33.89 E-value=29 Score=33.19 Aligned_cols=36 Identities=22% Similarity=0.275 Sum_probs=29.1
Q ss_pred hCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
++..+++|.+||.+.. ....+.|+..|+.||+.|+.
T Consensus 342 ~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 342 QTSVPNVYAVGDLIGG--PMEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp BCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 3456789999999875 35788899999999998863
No 290
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=33.16 E-value=39 Score=31.49 Aligned_cols=37 Identities=27% Similarity=0.352 Sum_probs=29.9
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. ....+.|...|+.+|+.|+.
T Consensus 290 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 290 LRTRVPHIYAIGDVVRG--PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCC--ccCHHHHHHhHHHHHHHHcC
Confidence 44556899999999875 35778899999999998874
No 291
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=32.68 E-value=49 Score=29.58 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=30.8
Q ss_pred cCCcccCceeEEEEecCCeeE-EEE-CCC--cEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVK-VTV-EGG--KTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~-V~~-~~G--~~~~ad~VI~t~p~ 170 (383)
+++++++++|+.+..+++++. +.. .+| .+++||.||-|--.
T Consensus 116 G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~ 160 (397)
T 3oz2_A 116 GADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp TCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred CcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcc
Confidence 568999999999998888765 322 234 35899999988654
No 292
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=31.67 E-value=30 Score=34.80 Aligned_cols=46 Identities=15% Similarity=0.149 Sum_probs=31.5
Q ss_pred HHHHHH-ccCCcccCceeEEEEecCCeeEEEE--CCC-cE------------------EEcCEEEEecCh
Q 016772 123 VINTLA-KGLDIRLGHRVTKITRHYIGVKVTV--EGG-KT------------------FVADAVVVAVPL 170 (383)
Q Consensus 123 l~~~L~-~~l~I~l~~~V~~I~~~~~~v~V~~--~~G-~~------------------~~ad~VI~t~p~ 170 (383)
+.+.|. ++++|++++.|++|.. +++.+.. .++ +. +.||.||+++..
T Consensus 577 ~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~ 644 (729)
T 1o94_A 577 MMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR 644 (729)
T ss_dssp HHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE
T ss_pred HHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC
Confidence 344443 3678999999999973 4555543 233 32 899999999875
No 293
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=31.63 E-value=51 Score=32.68 Aligned_cols=50 Identities=18% Similarity=0.050 Sum_probs=35.0
Q ss_pred HHHHHHHHc---cCCcccCceeEEEEecCC---eeE-E--EE-CCCc--EEEcCEEEEecCh
Q 016772 121 LPVINTLAK---GLDIRLGHRVTKITRHYI---GVK-V--TV-EGGK--TFVADAVVVAVPL 170 (383)
Q Consensus 121 ~~l~~~L~~---~l~I~l~~~V~~I~~~~~---~v~-V--~~-~~G~--~~~ad~VI~t~p~ 170 (383)
..|.+++.+ +++|+.++.|+.|..+++ +|. | .. .+|+ .+.|++||+|+--
T Consensus 170 ~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 170 VIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp HHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 345555544 689999999999988766 543 3 22 4554 5899999999853
No 294
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=31.30 E-value=34 Score=33.76 Aligned_cols=35 Identities=40% Similarity=0.647 Sum_probs=26.7
Q ss_pred CCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHH
Q 016772 317 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 317 p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
.++||||||+-+... +.+-|..+|..|+..+...+
T Consensus 377 ~~~gLf~AGqi~g~~---Gy~eA~a~G~~AG~naa~~~ 411 (641)
T 3cp8_A 377 PVENLFFAGQINGTS---GYEEAAAQGLMAGINAVRKI 411 (641)
T ss_dssp SSBTEEECSGGGTBC---CHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEEeecCCc---cHHHHHHHHHHHHHHHHHHh
Confidence 368999999998763 44477889999988776544
No 295
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=31.22 E-value=45 Score=32.58 Aligned_cols=40 Identities=25% Similarity=0.335 Sum_probs=29.0
Q ss_pred hCCCCCEEEeccccCC-CC------CchhhHHHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATSM-SY------PGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 315 ~~p~~~l~faG~~~~~-~~------~g~v~gA~~SG~~aA~~i~~~l 354 (383)
+.++++||-|||.... .+ +.++-.|+..|++|++.+.+.+
T Consensus 369 ~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 369 ETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 4489999999997532 11 1246678889999999887654
No 296
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=31.21 E-value=34 Score=32.02 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=29.4
Q ss_pred HhCCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 351 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~ 351 (383)
+++..+++|.+||.+.. ....+.|...|+.+|+.|+
T Consensus 293 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~ 328 (458)
T 1lvl_A 293 CQTSMHNVWAIGDVAGE--PMLAHRAMAQGEMVAEIIA 328 (458)
T ss_dssp CBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHT
T ss_pred CcCCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHhc
Confidence 44556899999999875 3577889999999999886
No 297
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=31.06 E-value=31 Score=31.28 Aligned_cols=38 Identities=18% Similarity=0.049 Sum_probs=29.4
Q ss_pred cCCcccCceeEEEEecCCeeEEEECCCcEEEcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~ 170 (383)
+++++++++|+.|+..+.. |++.+ ..+.+|++|+|+-.
T Consensus 74 ~v~~~~~~~v~~i~~~~~~--v~~~~-~~~~~d~lviAtG~ 111 (384)
T 2v3a_A 74 NARILTHTRVTGIDPGHQR--IWIGE-EEVRYRDLVLAWGA 111 (384)
T ss_dssp TCEEECSCCCCEEEGGGTE--EEETT-EEEECSEEEECCCE
T ss_pred CcEEEeCCEEEEEECCCCE--EEECC-cEEECCEEEEeCCC
Confidence 5678889999999876554 44444 47999999999865
No 298
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=29.38 E-value=52 Score=29.63 Aligned_cols=35 Identities=11% Similarity=0.134 Sum_probs=27.5
Q ss_pred CCEEEeccccCC---CCCchhhHHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 319 ~~l~faG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~ 353 (383)
+|++++||+.|. ..+.+++.|++.|...|+.|...
T Consensus 311 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~ 348 (412)
T 4hb9_A 311 STVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASV 348 (412)
T ss_dssp CSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 689999999664 33458999999999988877543
No 299
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=28.98 E-value=40 Score=31.63 Aligned_cols=38 Identities=11% Similarity=0.192 Sum_probs=31.0
Q ss_pred CCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 016772 318 VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 318 ~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
++++|.+|+..... .+.+..|+..|..+|+.|+..+..
T Consensus 359 ~p~vya~Gd~~~g~-~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 359 VPGLYCSGWVKRGP-TGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp CTTEEECTHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcCC-CccHHHHHHHHHHHHHHHHHHHHh
Confidence 57999999987542 345778999999999999988765
No 300
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=28.57 E-value=54 Score=29.66 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=28.5
Q ss_pred CCEEEeccccCC---CCCchhhHHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 319 ~~l~faG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~ 353 (383)
+|++++||+.|. ..+.+++-|+++|..+|+.|.+.
T Consensus 286 ~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~ 323 (399)
T 2x3n_A 286 DNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLA 323 (399)
T ss_dssp TTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhh
Confidence 689999999764 23458999999999999988654
No 301
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=28.22 E-value=43 Score=31.39 Aligned_cols=40 Identities=8% Similarity=-0.030 Sum_probs=31.5
Q ss_pred CCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 016772 317 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 357 (383)
Q Consensus 317 p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 357 (383)
.++++|.+|+..... .+.+..|+..|..+|+.|+..+...
T Consensus 350 ~~pgvya~GD~~~gp-~~~i~~a~~~g~~~a~~i~~~l~~~ 389 (456)
T 1lqt_A 350 GSPNEYVVGWIKRGP-TGVIGTNKKDAQDTVDTLIKNLGNA 389 (456)
T ss_dssp TCSSEEECTHHHHCS-CSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCC-chhHHHHHHHHHHHHHHHHHHHHhC
Confidence 467999999987642 3456679999999999999887653
No 302
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=28.08 E-value=71 Score=28.64 Aligned_cols=36 Identities=22% Similarity=0.428 Sum_probs=28.7
Q ss_pred CCEEEeccccCC---CCCchhhHHHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 319 ~~l~faG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
+|+.++||+.+. ..+.+++-|+.+|..+|+.|.+.+
T Consensus 277 ~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~ 315 (397)
T 3cgv_A 277 PGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAI 315 (397)
T ss_dssp TTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 689999999765 234588999999999998887654
No 303
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=28.02 E-value=47 Score=31.88 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=28.7
Q ss_pred cCCcccCceeEEEEecCC---eeE-EEE--CCCcE--E---EcCEEEEecCh
Q 016772 130 GLDIRLGHRVTKITRHYI---GVK-VTV--EGGKT--F---VADAVVVAVPL 170 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~---~v~-V~~--~~G~~--~---~ad~VI~t~p~ 170 (383)
+++|++++.|++|..+++ ++. |.+ .+|+. + .++.||+++-.
T Consensus 208 ~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa 259 (536)
T 1ju2_A 208 NLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGT 259 (536)
T ss_dssp TEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHH
T ss_pred CcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcc
Confidence 567999999999998763 433 444 35653 4 56889998743
No 304
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=27.24 E-value=58 Score=32.27 Aligned_cols=39 Identities=28% Similarity=0.314 Sum_probs=28.1
Q ss_pred CCCCCEEEeccccCC-CC------CchhhHHHHHHHHHHHHHHHHH
Q 016772 316 IPVDNLFFAGEATSM-SY------PGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 316 ~p~~~l~faG~~~~~-~~------~g~v~gA~~SG~~aA~~i~~~l 354 (383)
.|+++||-|||.... .+ +.++-.|+..|++|++.+.+.+
T Consensus 383 v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 428 (660)
T 2bs2_A 383 AKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHC 428 (660)
T ss_dssp CSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 489999999996422 11 1246668889999999876654
No 305
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=26.74 E-value=58 Score=33.95 Aligned_cols=41 Identities=24% Similarity=0.320 Sum_probs=29.8
Q ss_pred ccCCcccCceeEEEEec-CCee-EEEECC-------C--cEEEcCEEEEecC
Q 016772 129 KGLDIRLGHRVTKITRH-YIGV-KVTVEG-------G--KTFVADAVVVAVP 169 (383)
Q Consensus 129 ~~l~I~l~~~V~~I~~~-~~~v-~V~~~~-------G--~~~~ad~VI~t~p 169 (383)
.+++|++++.|++|..+ ++++ .|+..+ | +++.||.||+++.
T Consensus 329 ~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G 380 (965)
T 2gag_A 329 DGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGG 380 (965)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECC
T ss_pred CCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCC
Confidence 36789999999999874 3433 233322 5 5799999999985
No 306
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=26.67 E-value=58 Score=30.96 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=31.1
Q ss_pred CCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHH
Q 016772 318 VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 318 ~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 353 (383)
.+++|-+||......+.+.+-|...|..+|+.|...
T Consensus 364 ~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 364 SNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp CSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 579999999877766778999999999999998653
No 307
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=26.60 E-value=49 Score=31.92 Aligned_cols=32 Identities=16% Similarity=0.378 Sum_probs=25.7
Q ss_pred CceeEEEEecCCeeEEEECCCcEEEcCEEEEecChHH
Q 016772 136 GHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 172 (383)
Q Consensus 136 ~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~t~p~~~ 172 (383)
.++|++|.. ++ |.+.+| .+++|.||+|+-...
T Consensus 365 ~~~I~~it~--~g--v~~~dG-~~~~D~iI~ATGf~~ 396 (549)
T 4ap3_A 365 STPIVGMDE--TG--IVTTGA-HYDLDMIVLATGFDA 396 (549)
T ss_dssp TSCEEEEET--TE--EEESSC-EEECSEEEECCCEEE
T ss_pred CCCceEEeC--Cc--EEeCCC-ceecCEEEECCcccc
Confidence 578888864 44 667899 999999999998754
No 308
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=26.43 E-value=36 Score=31.62 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=24.7
Q ss_pred cccCceeEEEEecCCeeEEEECCCcE-EEcCEEEEecCh
Q 016772 133 IRLGHRVTKITRHYIGVKVTVEGGKT-FVADAVVVAVPL 170 (383)
Q Consensus 133 I~l~~~V~~I~~~~~~v~V~~~~G~~-~~ad~VI~t~p~ 170 (383)
|.++..|++|..+++ .|++.+|+. +.+|.||+++-.
T Consensus 254 i~~~~~v~~~~~~~~--~v~~~dG~~~~~~D~vi~atG~ 290 (447)
T 2gv8_A 254 LQQVPEITKFDPTTR--EIYLKGGKVLSNIDRVIYCTGY 290 (447)
T ss_dssp EEEECCEEEEETTTT--EEEETTTEEECCCSEEEECCCB
T ss_pred eEEecCeEEEecCCC--EEEECCCCEeccCCEEEECCCC
Confidence 445566777754333 466778876 689999999864
No 309
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=25.17 E-value=36 Score=33.22 Aligned_cols=40 Identities=23% Similarity=0.167 Sum_probs=28.9
Q ss_pred CCCCEEEeccccC-CCC------CchhhHHHHHHHHHHHHHHHHHHH
Q 016772 317 PVDNLFFAGEATS-MSY------PGSVHGAFSTGLMAAEDCRMRVLE 356 (383)
Q Consensus 317 p~~~l~faG~~~~-~~~------~g~v~gA~~SG~~aA~~i~~~l~~ 356 (383)
|+++||-||+... ..+ +.++-.|+..|++|++.+.+....
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~~~ 425 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAE 425 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhc
Confidence 7999999999643 211 124667889999999988766543
No 310
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=24.98 E-value=60 Score=29.57 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=27.0
Q ss_pred CCEEEeccccCC---CCCchhhHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 319 ~~l~faG~~~~~---~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+|++++||+.|. ..+.+++.|+++|...|+.|..
T Consensus 303 grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~ 339 (410)
T 3c96_A 303 GRITLLGDAAHLMYPMGANGASQAILDGIELAAALAR 339 (410)
T ss_dssp TTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhc
Confidence 689999999664 3345899999999999988753
No 311
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=24.34 E-value=41 Score=29.07 Aligned_cols=38 Identities=11% Similarity=0.063 Sum_probs=29.2
Q ss_pred CCCEEEeccccCC-----CCCchhhHHHHHHHHHHHHHHHHHH
Q 016772 318 VDNLFFAGEATSM-----SYPGSVHGAFSTGLMAAEDCRMRVL 355 (383)
Q Consensus 318 ~~~l~faG~~~~~-----~~~g~v~gA~~SG~~aA~~i~~~l~ 355 (383)
.+++|.+|+.+.. ..+.+..+|+.||..+|..|.+.|.
T Consensus 233 ~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~ 275 (284)
T 1rp0_A 233 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALG 275 (284)
T ss_dssp ETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhh
Confidence 4789999987532 1233678999999999999988764
No 312
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=23.70 E-value=87 Score=29.64 Aligned_cols=36 Identities=8% Similarity=0.128 Sum_probs=27.5
Q ss_pred CCEEEeccccCC---CCCchhhHHHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 319 ~~l~faG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
+|++++||+.|. ..+.+++.|++.+...|..|...+
T Consensus 277 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~ 315 (500)
T 2qa1_A 277 GRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVV 315 (500)
T ss_dssp TTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHH
Confidence 689999999664 234589999999988887776543
No 313
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=23.50 E-value=67 Score=31.20 Aligned_cols=37 Identities=14% Similarity=0.175 Sum_probs=26.1
Q ss_pred CCCCEEEeccccCCCCCc--hhhHHHHHHHHHHHHHHHH
Q 016772 317 PVDNLFFAGEATSMSYPG--SVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 317 p~~~l~faG~~~~~~~~g--~v~gA~~SG~~aA~~i~~~ 353 (383)
.++||+.+..++.|...+ +.--++.-|++||+.|+++
T Consensus 534 Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~ 572 (577)
T 3q9t_A 534 GIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAE 572 (577)
T ss_dssp TCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhh
Confidence 357999999998884333 3344566788888877654
No 314
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=23.48 E-value=83 Score=29.76 Aligned_cols=36 Identities=8% Similarity=0.103 Sum_probs=27.9
Q ss_pred CCEEEeccccCC---CCCchhhHHHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 319 ~~l~faG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
+|++++||+.|. ..+.+++.|++.+...|..|...+
T Consensus 278 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l 316 (499)
T 2qa2_A 278 GRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVV 316 (499)
T ss_dssp TTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHH
Confidence 689999999664 334589999999998888776543
No 315
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=23.35 E-value=71 Score=31.56 Aligned_cols=33 Identities=30% Similarity=0.519 Sum_probs=24.3
Q ss_pred CCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHH
Q 016772 318 VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 318 ~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 353 (383)
++||||||+-+... |+ +-|..+|..|+......
T Consensus 384 ~~gLf~AGqinGtt--GY-eEAaaqGl~AG~nAa~~ 416 (651)
T 3ces_A 384 IQGLFFAGQINGTT--GY-EEAAAQGLLAGLNAARL 416 (651)
T ss_dssp SBTEEECSGGGTCC--CH-HHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEecCCc--Ch-HHHHHHHHHHHHHHHHH
Confidence 57999999988763 34 46777888888765543
No 316
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=23.31 E-value=87 Score=28.15 Aligned_cols=36 Identities=19% Similarity=0.082 Sum_probs=29.0
Q ss_pred CCEEEeccccCC---CCCchhhHHHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 319 ~~l~faG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
+|+.++||+.|. ..+.+++-|+++|...|+.|...+
T Consensus 279 grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~ 317 (394)
T 1k0i_A 279 GRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAY 317 (394)
T ss_dssp TTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHh
Confidence 689999999774 234589999999999999887654
No 317
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=23.26 E-value=70 Score=28.78 Aligned_cols=34 Identities=12% Similarity=0.071 Sum_probs=27.4
Q ss_pred CCEEEeccccCCC---CCchhhHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSMS---YPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 319 ~~l~faG~~~~~~---~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+|+.++||+.|.. .+.+++-|+++|..+|+.|..
T Consensus 262 grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~ 298 (381)
T 3c4a_A 262 GKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCT 298 (381)
T ss_dssp TTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhc
Confidence 6899999997753 335899999999999988743
No 318
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=22.78 E-value=42 Score=32.98 Aligned_cols=39 Identities=23% Similarity=0.135 Sum_probs=28.5
Q ss_pred hCCCCCEEEeccccC-CCC------CchhhHHHHHHHHHHHHHHHH
Q 016772 315 RIPVDNLFFAGEATS-MSY------PGSVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 315 ~~p~~~l~faG~~~~-~~~------~g~v~gA~~SG~~aA~~i~~~ 353 (383)
.+|+++||-|||... ..+ +.++-.|+..|++|++.+.+.
T Consensus 386 ~t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~ 431 (621)
T 2h88_A 386 DKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAET 431 (621)
T ss_dssp EEEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHh
Confidence 368999999999743 211 125677889999999987654
No 319
>1qey_A MNT-C, protein (regulatory protein MNT); oligomerization, transcriptional control, P22 MNT repressor, gene regulation; NMR {Enterobacteria phage P22} SCOP: h.2.1.1
Probab=22.58 E-value=43 Score=18.11 Aligned_cols=25 Identities=20% Similarity=0.348 Sum_probs=17.1
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHhCC
Q 016772 252 ARDIEKMSDEAAANFAFTQLKKILP 276 (383)
Q Consensus 252 a~~~~~~~~ee~~~~v~~~L~~~~~ 276 (383)
++++.+.-.+.+.+.+.+.|+++|.
T Consensus 4 aER~Ad~qse~vKk~vfdtLk~~Y~ 28 (31)
T 1qey_A 4 AERLADEQSELVKKMVFDTLKDLYK 28 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4455544456778888888888763
No 320
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=22.36 E-value=70 Score=27.42 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=25.2
Q ss_pred ChHHHHHHHHccCCcccCceeEEEEecCCe-----eEEEECCCcE
Q 016772 119 GYLPVINTLAKGLDIRLGHRVTKITRHYIG-----VKVTVEGGKT 158 (383)
Q Consensus 119 G~~~l~~~L~~~l~I~l~~~V~~I~~~~~~-----v~V~~~~G~~ 158 (383)
||++|...+.+ .++.+|.+|..-+++ ++|++.||+.
T Consensus 1 g~~~v~a~~~~----l~G~~v~~v~~~g~G~~~~vyrv~l~DG~~ 41 (288)
T 3f7w_A 1 GVNSVAARVTE----LTGREVAAVAERGHSHRWHLYRVELADGTP 41 (288)
T ss_dssp CCHHHHHHHHH----HHCCCEEEEEEEEEETTEEEEEEEETTSCE
T ss_pred ChHHHHHHHHH----hcCCCeEEEEecCCCCCeEEEEEEECCCCE
Confidence 67777777665 467788888765433 5788889854
No 321
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=22.31 E-value=67 Score=31.28 Aligned_cols=38 Identities=8% Similarity=-0.013 Sum_probs=27.3
Q ss_pred CCCCEEEeccccCCCCCc--hhhHHHHHHHHHHHHHHHHH
Q 016772 317 PVDNLFFAGEATSMSYPG--SVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 317 p~~~l~faG~~~~~~~~g--~v~gA~~SG~~aA~~i~~~l 354 (383)
.++||+.+..++.|...+ +.--++.-|++||+.|++..
T Consensus 540 Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~~ 579 (583)
T 3qvp_A 540 GVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDY 579 (583)
T ss_dssp TCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHhh
Confidence 357999999999884332 33445667888998887654
No 322
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=22.30 E-value=67 Score=29.16 Aligned_cols=33 Identities=12% Similarity=0.129 Sum_probs=27.1
Q ss_pred CCEEEeccccCCC---CCchhhHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSMS---YPGSVHGAFSTGLMAAEDCR 351 (383)
Q Consensus 319 ~~l~faG~~~~~~---~~g~v~gA~~SG~~aA~~i~ 351 (383)
+|+.++||+.|.. .+.+++.|+++|..+|+.|.
T Consensus 301 ~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~ 336 (407)
T 3rp8_A 301 GRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFR 336 (407)
T ss_dssp TTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHh
Confidence 5899999997752 34589999999999998775
No 323
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=21.80 E-value=69 Score=30.34 Aligned_cols=39 Identities=28% Similarity=0.368 Sum_probs=29.4
Q ss_pred cCCcccCceeEEEEecCCeeE---EEECCC-cEEEcCEEEEec
Q 016772 130 GLDIRLGHRVTKITRHYIGVK---VTVEGG-KTFVADAVVVAV 168 (383)
Q Consensus 130 ~l~I~l~~~V~~I~~~~~~v~---V~~~~G-~~~~ad~VI~t~ 168 (383)
.+.|..++.|++|..++++++ +...++ ..+.|+.||++.
T Consensus 225 nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsA 267 (526)
T 3t37_A 225 NLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCA 267 (526)
T ss_dssp TEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECS
T ss_pred CeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEcc
Confidence 467999999999999888743 333333 357899999986
No 324
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=21.44 E-value=77 Score=29.61 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=28.7
Q ss_pred ccCCcccCceeEEEEecCC--eeEEEE--------------CCC--cEEEcCEEEEecCh
Q 016772 129 KGLDIRLGHRVTKITRHYI--GVKVTV--------------EGG--KTFVADAVVVAVPL 170 (383)
Q Consensus 129 ~~l~I~l~~~V~~I~~~~~--~v~V~~--------------~~G--~~~~ad~VI~t~p~ 170 (383)
++++|++++.|++|..++. ++.+.. .+| +++.||.||.++..
T Consensus 265 ~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp EEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCE
T ss_pred ceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccc
Confidence 3567999999999986532 233321 134 46899999999865
No 325
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=20.94 E-value=88 Score=29.97 Aligned_cols=36 Identities=8% Similarity=0.063 Sum_probs=28.1
Q ss_pred CCEEEeccccCCC---CCchhhHHHHHHHHHHHHHHHHH
Q 016772 319 DNLFFAGEATSMS---YPGSVHGAFSTGLMAAEDCRMRV 354 (383)
Q Consensus 319 ~~l~faG~~~~~~---~~g~v~gA~~SG~~aA~~i~~~l 354 (383)
+|++++||+.|.. .+.+++.|++.+...|..|...+
T Consensus 309 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l 347 (549)
T 2r0c_A 309 GRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATL 347 (549)
T ss_dssp TTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHH
Confidence 6899999997742 33488889999999888876654
No 326
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=20.70 E-value=1.4e+02 Score=31.24 Aligned_cols=41 Identities=17% Similarity=0.032 Sum_probs=29.2
Q ss_pred ccCCcccCceeEEEEecCCeeE-EEEC------CC---------cEEEcCEEEEecC
Q 016772 129 KGLDIRLGHRVTKITRHYIGVK-VTVE------GG---------KTFVADAVVVAVP 169 (383)
Q Consensus 129 ~~l~I~l~~~V~~I~~~~~~v~-V~~~------~G---------~~~~ad~VI~t~p 169 (383)
+++++++++.|++|..++++|. |++. +| .++.||.||+++.
T Consensus 383 ~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G 439 (1025)
T 1gte_A 383 EKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFG 439 (1025)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSC
T ss_pred cCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCC
Confidence 4778999999999987655543 3321 22 3689999999973
No 327
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=20.39 E-value=64 Score=30.20 Aligned_cols=42 Identities=7% Similarity=0.134 Sum_probs=29.1
Q ss_pred ccCCcccCceeEEEEecC-C-eeE-EEEC---------------CC--cEEEcCEEEEecCh
Q 016772 129 KGLDIRLGHRVTKITRHY-I-GVK-VTVE---------------GG--KTFVADAVVVAVPL 170 (383)
Q Consensus 129 ~~l~I~l~~~V~~I~~~~-~-~v~-V~~~---------------~G--~~~~ad~VI~t~p~ 170 (383)
++++|++++.+++|..++ + ++. |++. +| +.+.||.||+++-.
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 346899999999998653 3 332 3221 34 57899999999864
No 328
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=20.36 E-value=75 Score=30.01 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=29.3
Q ss_pred HhCCCCCEEEeccccCC--------------------------------CCCchhhHHHHHHHHHHHHHHH
Q 016772 314 LRIPVDNLFFAGEATSM--------------------------------SYPGSVHGAFSTGLMAAEDCRM 352 (383)
Q Consensus 314 ~~~p~~~l~faG~~~~~--------------------------------~~~g~v~gA~~SG~~aA~~i~~ 352 (383)
+++..+++|.+||.+.. ......+-|+..|+.||+.|+.
T Consensus 300 ~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 300 QRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp CBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred cccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 34557899999998820 2235788899999999998864
No 329
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=20.11 E-value=65 Score=32.01 Aligned_cols=35 Identities=23% Similarity=0.190 Sum_probs=28.2
Q ss_pred CCCCCEEEeccccCCCCCchhhHHHHHHHHHHHHHHHH
Q 016772 316 IPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 353 (383)
Q Consensus 316 ~p~~~l~faG~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 353 (383)
+..+++|.+||...+ +.+..|+..|..||+.|...
T Consensus 639 t~~~~VyaiGD~~~~---~~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 639 GEIASVRGIGDAWAP---GTIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp TSCSEEEECGGGTSC---BCHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCEEEEeCCCch---hhHHHHHHHHHHHHHHHHhh
Confidence 456799999999876 35666999999999988654
Done!