Query 016774
Match_columns 383
No_of_seqs 189 out of 1923
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 03:34:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016774.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016774hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 1.4E-41 4.7E-46 311.6 30.8 259 36-357 12-273 (308)
2 4asc_A Kelch repeat and BTB do 100.0 6.4E-42 2.2E-46 314.8 24.3 276 14-355 16-306 (315)
3 3ii7_A Kelch-like protein 7; p 100.0 7.8E-41 2.7E-45 306.2 30.5 263 15-343 28-293 (306)
4 2woz_A Kelch repeat and BTB do 100.0 3.2E-41 1.1E-45 310.5 27.5 275 14-354 27-315 (318)
5 2xn4_A Kelch-like protein 2; s 100.0 1.9E-40 6.4E-45 303.1 31.1 265 14-343 33-298 (302)
6 1zgk_A Kelch-like ECH-associat 100.0 1.8E-40 6.3E-45 304.1 30.7 264 14-343 42-308 (308)
7 2uvk_A YJHT; unknown function, 100.0 4E-40 1.4E-44 308.1 28.8 279 36-381 7-342 (357)
8 3ii7_A Kelch-like protein 7; p 100.0 1.3E-39 4.4E-44 298.1 31.5 245 48-357 11-258 (306)
9 2vpj_A Kelch-like protein 12; 100.0 2.3E-39 7.8E-44 295.7 29.9 263 14-343 34-299 (301)
10 2xn4_A Kelch-like protein 2; s 100.0 5.9E-39 2E-43 293.2 32.3 252 43-357 10-262 (302)
11 2vpj_A Kelch-like protein 12; 100.0 6.3E-39 2.1E-43 292.8 31.7 250 46-357 12-264 (301)
12 4asc_A Kelch repeat and BTB do 100.0 5.3E-39 1.8E-43 295.3 24.9 267 47-380 3-276 (315)
13 2zwa_A Leucine carboxyl methyl 100.0 3.4E-38 1.2E-42 318.5 29.9 286 36-381 386-694 (695)
14 2woz_A Kelch repeat and BTB do 100.0 4.3E-38 1.5E-42 289.7 26.8 275 36-380 6-286 (318)
15 2uvk_A YJHT; unknown function, 100.0 1.4E-36 4.9E-41 284.0 22.8 257 15-327 35-350 (357)
16 2zwa_A Leucine carboxyl methyl 100.0 1.2E-32 4.2E-37 277.9 22.7 258 15-300 416-693 (695)
17 1k3i_A Galactose oxidase precu 100.0 6.6E-31 2.3E-35 264.7 23.0 287 14-357 222-532 (656)
18 1k3i_A Galactose oxidase precu 100.0 4.2E-29 1.4E-33 251.5 19.5 280 14-357 169-477 (656)
19 3dsm_A Uncharacterized protein 97.2 0.13 4.4E-06 46.1 22.6 201 38-301 43-253 (328)
20 3mbr_X Glutamine cyclotransfer 97.1 0.11 3.8E-06 44.5 19.4 196 94-355 22-224 (243)
21 3nol_A Glutamine cyclotransfer 96.4 0.31 1.1E-05 42.2 17.7 194 96-355 46-245 (262)
22 2iwa_A Glutamine cyclotransfer 96.3 0.47 1.6E-05 41.2 20.7 197 96-357 24-228 (266)
23 3nok_A Glutaminyl cyclase; bet 96.0 0.52 1.8E-05 40.8 16.8 191 96-355 58-255 (268)
24 3dsm_A Uncharacterized protein 96.0 0.81 2.8E-05 40.8 20.2 165 90-301 41-212 (328)
25 3v9f_A Two-component system se 94.2 5.2 0.00018 40.3 22.7 138 120-300 470-610 (781)
26 3bws_A Protein LP49; two-domai 93.5 4.5 0.00015 36.9 20.2 109 102-242 223-334 (433)
27 1l0q_A Surface layer protein; 93.1 4.1 0.00014 36.5 16.4 142 104-301 3-147 (391)
28 3bws_A Protein LP49; two-domai 92.8 5.5 0.00019 36.3 18.1 156 102-301 133-292 (433)
29 2xbg_A YCF48-like protein; pho 92.8 5 0.00017 35.6 23.3 200 21-283 66-268 (327)
30 3q7m_A Lipoprotein YFGL, BAMB; 92.4 5.9 0.0002 35.5 25.4 162 43-250 48-215 (376)
31 3hfq_A Uncharacterized protein 92.4 5.5 0.00019 35.1 20.2 32 210-249 145-177 (347)
32 1l0q_A Surface layer protein; 92.3 6 0.00021 35.4 18.2 143 103-301 44-189 (391)
33 3q7m_A Lipoprotein YFGL, BAMB; 91.6 7.3 0.00025 34.9 24.8 193 42-302 97-297 (376)
34 3jrp_A Fusion protein of prote 91.5 7.1 0.00024 34.5 20.5 67 216-301 171-240 (379)
35 3u4y_A Uncharacterized protein 90.0 9 0.00031 33.3 16.9 29 211-247 181-210 (331)
36 3jro_A Fusion protein of prote 89.4 17 0.00057 36.4 17.7 66 217-301 170-238 (753)
37 2iwa_A Glutamine cyclotransfer 89.4 9.3 0.00032 32.9 13.7 112 154-302 24-136 (266)
38 3nol_A Glutamine cyclotransfer 89.3 2.3 8E-05 36.6 9.6 107 159-303 50-157 (262)
39 3nok_A Glutaminyl cyclase; bet 89.1 10 0.00035 32.7 13.5 151 42-242 58-210 (268)
40 2xbg_A YCF48-like protein; pho 88.6 12 0.00042 33.0 24.1 206 11-283 13-223 (327)
41 4g56_B MGC81050 protein; prote 88.6 12 0.00041 33.3 14.6 109 158-301 147-258 (357)
42 4aez_A CDC20, WD repeat-contai 87.8 15 0.00052 33.1 16.4 135 120-301 114-248 (401)
43 1k8k_C P40, ARP2/3 complex 41 87.4 14 0.00049 32.4 19.4 153 48-241 19-172 (372)
44 3mbr_X Glutamine cyclotransfer 87.4 13 0.00043 31.6 21.1 153 42-242 24-179 (243)
45 3v9f_A Two-component system se 86.8 27 0.00093 34.9 19.1 130 120-286 516-648 (781)
46 2ojh_A Uncharacterized protein 86.3 14 0.00047 31.0 21.0 199 48-300 52-257 (297)
47 3dwl_C Actin-related protein 2 86.1 16 0.00055 32.3 14.0 68 160-242 110-177 (377)
48 4a2l_A BT_4663, two-component 85.6 32 0.0011 34.5 19.0 97 160-285 552-650 (795)
49 4gqb_B Methylosome protein 50; 85.5 19 0.00065 31.9 14.2 111 157-301 134-246 (344)
50 3hfq_A Uncharacterized protein 84.1 21 0.00071 31.2 18.7 121 156-300 45-170 (347)
51 3ju4_A Endo-N-acetylneuraminid 83.1 28 0.00095 31.9 18.3 197 135-356 269-482 (670)
52 4aez_A CDC20, WD repeat-contai 83.1 26 0.00088 31.5 21.8 68 158-242 225-293 (401)
53 4g56_B MGC81050 protein; prote 82.8 25 0.00086 31.2 14.0 68 211-301 145-213 (357)
54 3jro_A Fusion protein of prote 82.5 25 0.00087 35.0 14.8 64 162-242 67-132 (753)
55 2ovr_B FBW7, F-BOX/WD repeat p 82.2 30 0.001 31.6 22.6 104 161-301 288-391 (445)
56 2dg1_A DRP35, lactonase; beta 81.8 25 0.00085 30.5 15.8 122 155-300 49-170 (333)
57 1gxr_A ESG1, transducin-like e 80.4 27 0.00092 29.9 20.5 108 156-301 189-296 (337)
58 3c5m_A Oligogalacturonate lyas 80.3 31 0.001 30.5 17.0 102 178-300 216-328 (396)
59 2hqs_A Protein TOLB; TOLB, PAL 80.2 35 0.0012 31.1 21.9 140 119-300 203-343 (415)
60 3jrp_A Fusion protein of prote 79.5 31 0.0011 30.1 14.5 109 160-301 21-134 (379)
61 2ojh_A Uncharacterized protein 79.0 27 0.00092 29.1 17.8 104 118-250 21-125 (297)
62 3azo_A Aminopeptidase; POP fam 78.9 49 0.0017 32.0 19.5 153 118-300 160-324 (662)
63 3dwl_C Actin-related protein 2 78.8 8.5 0.00029 34.2 9.0 113 156-301 17-131 (377)
64 1ri6_A Putative isomerase YBHE 78.6 31 0.0011 29.6 15.8 53 178-241 60-114 (343)
65 4a2l_A BT_4663, two-component 78.4 58 0.002 32.6 26.1 135 120-300 472-613 (795)
66 3vgz_A Uncharacterized protein 77.9 34 0.0012 29.6 24.7 68 156-242 146-215 (353)
67 1p22_A F-BOX/WD-repeat protein 77.3 42 0.0014 30.5 13.7 148 98-301 138-285 (435)
68 3fm0_A Protein CIAO1; WDR39,SG 76.9 38 0.0013 29.7 13.9 153 103-300 28-180 (345)
69 1jmx_B Amine dehydrogenase; ox 75.8 38 0.0013 29.2 19.2 50 178-242 125-175 (349)
70 3mkq_A Coatomer beta'-subunit; 75.6 67 0.0023 31.8 18.0 106 161-301 152-259 (814)
71 3vgz_A Uncharacterized protein 75.3 40 0.0014 29.1 25.6 147 102-300 152-302 (353)
72 3ott_A Two-component system se 74.5 71 0.0024 31.7 15.4 110 103-250 483-592 (758)
73 2ecf_A Dipeptidyl peptidase IV 74.4 68 0.0023 31.4 18.9 104 179-300 264-368 (741)
74 3scy_A Hypothetical bacterial 74.1 45 0.0015 29.2 19.0 27 268-300 158-185 (361)
75 1jmx_B Amine dehydrogenase; ox 73.9 25 0.00084 30.4 10.6 65 102-188 10-75 (349)
76 3no2_A Uncharacterized protein 73.8 41 0.0014 28.6 21.1 224 48-353 4-230 (276)
77 2dg1_A DRP35, lactonase; beta 73.7 43 0.0015 28.8 13.6 123 102-250 55-177 (333)
78 3fm0_A Protein CIAO1; WDR39,SG 73.7 46 0.0016 29.1 14.8 115 156-301 22-136 (345)
79 1gxr_A ESG1, transducin-like e 73.4 42 0.0015 28.6 16.0 117 155-301 56-172 (337)
80 1k8k_C P40, ARP2/3 complex 41 73.2 46 0.0016 28.9 23.5 22 215-242 212-233 (372)
81 1yiq_A Quinohemoprotein alcoho 73.1 75 0.0026 31.3 15.3 132 96-250 64-200 (689)
82 4e54_B DNA damage-binding prot 73.0 55 0.0019 29.7 15.4 65 161-242 176-240 (435)
83 3zwl_B Eukaryotic translation 71.2 50 0.0017 28.5 18.5 98 159-286 184-281 (369)
84 1kv9_A Type II quinohemoprotei 71.1 74 0.0025 31.2 14.1 131 96-250 60-195 (668)
85 1nir_A Nitrite reductase; hemo 70.6 74 0.0025 30.2 14.7 62 102-188 148-212 (543)
86 3ju4_A Endo-N-acetylneuraminid 70.6 65 0.0022 29.5 22.3 192 80-285 270-482 (670)
87 3scy_A Hypothetical bacterial 70.0 56 0.0019 28.6 17.2 16 338-353 158-173 (361)
88 1r5m_A SIR4-interacting protei 69.2 61 0.0021 28.7 19.1 108 156-300 253-360 (425)
89 2hqs_A Protein TOLB; TOLB, PAL 68.4 69 0.0024 29.0 18.8 116 156-301 184-300 (415)
90 1kb0_A Quinohemoprotein alcoho 68.0 96 0.0033 30.5 28.9 130 42-198 71-208 (677)
91 2ad6_A Methanol dehydrogenase 66.9 92 0.0031 29.9 25.9 130 42-198 56-194 (571)
92 4ery_A WD repeat-containing pr 66.4 60 0.0021 27.6 22.5 108 159-301 116-223 (312)
93 1flg_A Protein (quinoprotein e 64.9 1E+02 0.0035 29.7 15.3 132 96-250 62-201 (582)
94 1sq9_A Antiviral protein SKI8; 64.4 75 0.0026 27.9 18.4 74 155-242 191-267 (397)
95 2aq5_A Coronin-1A; WD40 repeat 63.8 80 0.0027 28.1 15.7 110 163-301 145-254 (402)
96 1kb0_A Quinohemoprotein alcoho 63.4 1.2E+02 0.004 29.8 23.9 132 96-250 71-207 (677)
97 3u4y_A Uncharacterized protein 62.1 74 0.0025 27.1 14.1 65 161-247 9-74 (331)
98 4gqb_B Methylosome protein 50; 60.9 86 0.003 27.5 18.0 62 163-242 183-246 (344)
99 1nir_A Nitrite reductase; hemo 59.4 1.2E+02 0.004 28.9 12.7 161 120-301 347-514 (543)
100 3c5m_A Oligogalacturonate lyas 58.9 93 0.0032 27.2 13.8 109 119-250 216-335 (396)
101 3no2_A Uncharacterized protein 57.4 88 0.003 26.5 14.3 101 157-285 131-235 (276)
102 4d9s_A UVB-resistance protein 56.2 1.2E+02 0.004 27.5 22.7 67 152-225 182-252 (406)
103 2vdu_B TRNA (guanine-N(7)-)-me 56.1 1.2E+02 0.004 27.5 15.8 113 156-301 155-271 (450)
104 3ei3_B DNA damage-binding prot 56.0 1E+02 0.0036 26.9 16.7 112 157-300 80-193 (383)
105 2z3z_A Dipeptidyl aminopeptida 55.7 1.5E+02 0.0052 28.7 20.9 107 177-300 234-343 (706)
106 4e54_B DNA damage-binding prot 55.4 1.2E+02 0.0041 27.4 14.9 108 161-300 131-239 (435)
107 1kv9_A Type II quinohemoprotei 55.4 1.6E+02 0.0054 28.8 26.2 129 42-197 60-195 (668)
108 3ow8_A WD repeat-containing pr 53.9 1.1E+02 0.0037 26.4 18.2 109 156-300 170-278 (321)
109 2ynn_A Coatomer subunit beta'; 53.9 1E+02 0.0035 26.1 11.9 185 102-357 108-293 (304)
110 2ad6_A Methanol dehydrogenase 53.5 1.6E+02 0.0054 28.2 22.5 132 96-250 56-193 (571)
111 2bkl_A Prolyl endopeptidase; m 53.4 1.7E+02 0.0058 28.5 19.6 117 155-300 231-350 (695)
112 3mkq_A Coatomer beta'-subunit; 52.4 1.8E+02 0.0062 28.6 19.1 110 156-300 103-216 (814)
113 2z3z_A Dipeptidyl aminopeptida 52.0 1.7E+02 0.0059 28.3 18.4 149 118-302 283-436 (706)
114 1pby_B Quinohemoprotein amine 51.9 1E+02 0.0035 26.1 10.2 49 119-188 115-164 (337)
115 3vl1_A 26S proteasome regulato 51.8 1.3E+02 0.0044 26.6 18.5 104 102-242 108-212 (420)
116 1p22_A F-BOX/WD-repeat protein 51.3 1.4E+02 0.0047 26.9 20.5 147 99-301 179-325 (435)
117 3pe7_A Oligogalacturonate lyas 51.1 1.3E+02 0.0043 26.4 15.7 56 233-300 168-224 (388)
118 4gga_A P55CDC, cell division c 50.3 1.4E+02 0.0048 26.7 15.7 135 120-300 126-260 (420)
119 4aow_A Guanine nucleotide-bind 49.9 1.2E+02 0.0041 25.7 17.0 61 163-242 186-246 (340)
120 4a11_B DNA excision repair pro 49.0 1.3E+02 0.0046 26.1 15.5 51 234-301 315-365 (408)
121 1r5m_A SIR4-interacting protei 48.7 1.4E+02 0.0048 26.2 19.9 108 155-300 211-318 (425)
122 2xdw_A Prolyl endopeptidase; a 48.5 2E+02 0.0069 28.0 21.3 103 177-300 258-367 (710)
123 1w6s_A Methanol dehydrogenase 47.5 2E+02 0.0069 27.7 21.4 131 42-198 56-200 (599)
124 1qks_A Cytochrome CD1 nitrite 47.4 2E+02 0.0067 27.6 15.9 187 90-301 339-538 (567)
125 3kci_A Probable E3 ubiquitin-p 45.0 1.7E+02 0.0059 26.2 14.6 17 153-169 223-239 (389)
126 3k26_A Polycomb protein EED; W 43.9 1.5E+02 0.0052 25.3 13.9 108 162-302 85-193 (366)
127 4aow_A Guanine nucleotide-bind 43.3 1.5E+02 0.0051 25.0 12.2 114 157-300 222-336 (340)
128 4d9s_A UVB-resistance protein 43.0 1.9E+02 0.0065 26.1 23.2 66 152-224 130-199 (406)
129 2ovr_B FBW7, F-BOX/WD repeat p 41.4 2E+02 0.0067 25.8 20.1 113 163-301 330-442 (445)
130 3g4e_A Regucalcin; six bladed 40.8 1.6E+02 0.0056 24.8 14.6 66 161-251 24-89 (297)
131 1w6s_A Methanol dehydrogenase 40.8 2.6E+02 0.0088 27.0 21.5 134 96-251 56-200 (599)
132 3ott_A Two-component system se 39.5 2.9E+02 0.0098 27.2 16.4 106 160-301 481-586 (758)
133 2ecf_A Dipeptidyl peptidase IV 38.7 2.8E+02 0.0096 26.9 12.4 116 155-300 41-180 (741)
134 1yiq_A Quinohemoprotein alcoho 37.7 3E+02 0.01 26.9 27.4 130 42-197 64-200 (689)
135 2pm9_A Protein WEB1, protein t 36.6 2.2E+02 0.0074 24.9 15.9 107 162-300 178-293 (416)
136 1vyh_C Platelet-activating fac 36.6 2.3E+02 0.0079 25.2 14.0 106 160-301 118-223 (410)
137 4gga_A P55CDC, cell division c 36.4 2.3E+02 0.0079 25.2 18.0 23 274-301 331-353 (420)
138 3ei3_B DNA damage-binding prot 36.1 2.2E+02 0.0074 24.8 19.1 148 104-301 87-236 (383)
139 1got_B GT-beta; complex (GTP-b 35.8 2.1E+02 0.0072 24.5 16.9 111 156-300 190-300 (340)
140 3sfz_A APAF-1, apoptotic pepti 35.5 4.1E+02 0.014 27.8 14.1 107 156-300 1009-1115(1249)
141 2z2n_A Virginiamycin B lyase; 34.9 1.9E+02 0.0065 23.8 22.2 151 96-299 60-211 (299)
142 2aq5_A Coronin-1A; WD40 repeat 34.9 2.4E+02 0.008 24.8 17.2 109 104-242 145-254 (402)
143 2qc5_A Streptogramin B lactona 34.2 2E+02 0.0067 23.7 20.7 151 96-299 65-216 (300)
144 3v7d_B Cell division control p 34.0 2.6E+02 0.0089 25.1 17.4 106 156-301 316-421 (464)
145 3pe7_A Oligogalacturonate lyas 33.9 2.3E+02 0.008 24.5 16.2 81 161-250 199-279 (388)
146 4ery_A WD repeat-containing pr 33.4 2.1E+02 0.0073 23.9 23.2 111 159-301 158-268 (312)
147 1ri6_A Putative isomerase YBHE 33.3 2.2E+02 0.0074 24.0 22.3 28 154-187 132-160 (343)
148 2pbi_B Guanine nucleotide-bind 33.0 2.4E+02 0.0083 24.4 18.4 104 162-300 210-314 (354)
149 4a11_B DNA excision repair pro 32.7 2.4E+02 0.0083 24.4 13.4 113 161-301 55-175 (408)
150 1erj_A Transcriptional repress 31.9 2.7E+02 0.0091 24.5 15.1 109 156-301 129-238 (393)
151 2p9w_A MAL S 1 allergenic prot 30.1 2.9E+02 0.0099 24.4 15.0 157 156-357 142-306 (334)
152 3zwl_B Eukaryotic translation 29.8 2.6E+02 0.0088 23.7 20.0 123 156-301 121-249 (369)
153 1qks_A Cytochrome CD1 nitrite 29.5 3.7E+02 0.013 25.5 13.3 129 149-301 340-477 (567)
154 2bkl_A Prolyl endopeptidase; m 29.4 4E+02 0.014 25.8 15.6 173 100-300 77-260 (695)
155 2xyi_A Probable histone-bindin 28.8 3.1E+02 0.011 24.4 15.6 20 276-301 290-309 (430)
156 3ow8_A WD repeat-containing pr 28.5 2.7E+02 0.0094 23.6 21.1 111 155-301 127-237 (321)
157 2xdw_A Prolyl endopeptidase; a 28.1 4.2E+02 0.014 25.7 18.8 152 119-301 151-320 (710)
158 1pjx_A Dfpase, DIISOPROPYLFLUO 27.1 2.7E+02 0.0093 23.1 10.9 103 120-241 47-161 (314)
159 3gre_A Serine/threonine-protei 26.8 3.3E+02 0.011 24.0 12.8 65 161-242 181-245 (437)
160 1q7f_A NHL, brain tumor CG1071 26.1 2.7E+02 0.0094 22.8 22.5 107 160-300 87-193 (286)
161 3i2n_A WD repeat-containing pr 25.5 3E+02 0.01 23.2 13.3 108 161-300 128-242 (357)
162 1yr2_A Prolyl oligopeptidase; 25.0 4.9E+02 0.017 25.4 15.0 150 64-250 293-447 (741)
163 3kci_A Probable E3 ubiquitin-p 24.4 3.7E+02 0.013 23.8 16.4 18 152-169 168-185 (389)
164 3sfz_A APAF-1, apoptotic pepti 24.4 6.2E+02 0.021 26.3 15.2 109 157-301 622-732 (1249)
165 1pjx_A Dfpase, DIISOPROPYLFLUO 23.5 3.2E+02 0.011 22.7 20.1 75 97-186 75-161 (314)
166 3f3f_A Nucleoporin SEH1; struc 23.3 3.2E+02 0.011 22.6 22.0 21 162-188 124-144 (351)
167 3vl1_A 26S proteasome regulato 23.0 3.8E+02 0.013 23.4 21.7 64 216-301 258-322 (420)
168 1xfd_A DIP, dipeptidyl aminope 22.6 5.2E+02 0.018 24.8 16.0 109 120-250 38-149 (723)
169 3odt_A Protein DOA1; ubiquitin 22.5 3.2E+02 0.011 22.4 15.9 194 43-324 108-301 (313)
170 2vdu_B TRNA (guanine-N(7)-)-me 22.3 4.2E+02 0.014 23.7 13.9 22 161-188 251-272 (450)
171 2z2n_A Virginiamycin B lyase; 22.0 3.3E+02 0.011 22.2 23.1 152 96-300 102-254 (299)
172 2ghs_A AGR_C_1268P; regucalcin 21.7 3.8E+02 0.013 22.9 14.1 112 103-250 61-174 (326)
173 3azo_A Aminopeptidase; POP fam 21.6 5.2E+02 0.018 24.5 23.4 122 156-300 135-273 (662)
174 4fj6_A Glycoside hydrolase fam 21.5 5.1E+02 0.018 24.4 14.2 93 180-285 354-452 (523)
175 2ghs_A AGR_C_1268P; regucalcin 21.5 3.8E+02 0.013 22.8 17.3 107 162-298 61-167 (326)
176 1vyh_C Platelet-activating fac 21.1 4.3E+02 0.015 23.3 13.6 66 158-242 158-223 (410)
177 1pgu_A Actin interacting prote 20.3 5.1E+02 0.018 23.9 18.4 110 156-300 494-613 (615)
178 2pbi_B Guanine nucleotide-bind 20.3 4.2E+02 0.014 22.8 14.7 62 217-301 210-271 (354)
179 3iz6_a 40S ribosomal protein R 20.2 4.3E+02 0.015 23.0 14.2 158 102-300 217-374 (380)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.4e-41 Score=311.63 Aligned_cols=259 Identities=18% Similarity=0.186 Sum_probs=217.9
Q ss_pred CCCCcccceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEEECCEEEEEcCcc---
Q 016774 36 PNPRASHSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGIN--- 112 (383)
Q Consensus 36 p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~--- 112 (383)
|.+|..|+++.++++||++||. .....+++++|++..+ +|+++. .+|.+|.+|+++.++++|||+||..
T Consensus 12 ~~~~~~~~~~~~~~~i~v~GG~--~~~~~~~~~~~d~~~~-----~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~~~~ 83 (308)
T 1zgk_A 12 GLVPRGSHAPKVGRLIYTAGGY--FRQSLSYLEAYNPSNG-----TWLRLA-DLQVPRSGLAGCVVGGLLYAVGGRNNSP 83 (308)
T ss_dssp ---------CCCCCCEEEECCB--SSSBCCCEEEEETTTT-----EEEECC-CCSSCCBSCEEEEETTEEEEECCEEEET
T ss_pred CeeeCCccccCCCCEEEEEeCc--CCCCcceEEEEcCCCC-----eEeECC-CCCcccccceEEEECCEEEEECCCcCCC
Confidence 7899999999999999999997 4567889999999555 999996 5788999999999999999999984
Q ss_pred CCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccC
Q 016774 113 DRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFG 192 (383)
Q Consensus 113 ~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~ 192 (383)
......+++++||+ .+++|+++.. +|.+|..|+++.+++ +||++||.... ..++++++||+.++
T Consensus 84 ~~~~~~~~~~~~d~-------~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~-~~~~~~~~yd~~~~---- 147 (308)
T 1zgk_A 84 DGNTDSSALDCYNP-------MTNQWSPCAP---MSVPRNRIGVGVIDG-HIYAVGGSHGC-IHHNSVERYEPERD---- 147 (308)
T ss_dssp TEEEECCCEEEEET-------TTTEEEECCC---CSSCCBTCEEEEETT-EEEEECCEETT-EECCCEEEEETTTT----
T ss_pred CCCeecceEEEECC-------CCCeEeECCC---CCcCccccEEEEECC-EEEEEcCCCCC-cccccEEEECCCCC----
Confidence 33446789999999 6999999865 788999999999877 99999998543 46789999999999
Q ss_pred ceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEE
Q 016774 193 SWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATL 272 (383)
Q Consensus 193 ~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~ 272 (383)
+|++++ ++|.+|..|+++.+ +++||++||... ....+++++||+.+ ++|+.+ ..+|.+|..|++++
T Consensus 148 ~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~~-~~~~~~~~~yd~~~--~~W~~~--------~~~p~~r~~~~~~~ 213 (308)
T 1zgk_A 148 EWHLVA--PMLTRRIGVGVAVL-NRLLYAVGGFDG-TNRLNSAECYYPER--NEWRMI--------TAMNTIRSGAGVCV 213 (308)
T ss_dssp EEEECC--CCSSCCBSCEEEEE-TTEEEEECCBCS-SCBCCCEEEEETTT--TEEEEC--------CCCSSCCBSCEEEE
T ss_pred eEeECC--CCCccccceEEEEE-CCEEEEEeCCCC-CCcCceEEEEeCCC--CeEeeC--------CCCCCccccceEEE
Confidence 999998 78999999999999 699999999863 34588999999999 999998 46889999999887
Q ss_pred EcCCEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccCCCCCCCccceeeeecCCCcEEEEE
Q 016774 273 ILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVF 352 (383)
Q Consensus 273 ~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~l~v~ 352 (383)
.+++|||+||.+.. ...+++++||++ +.+|+.+.. +|.+|..|+++++ +++|||+
T Consensus 214 -~~~~iyv~GG~~~~-~~~~~v~~yd~~------------------~~~W~~~~~---~p~~r~~~~~~~~--~~~i~v~ 268 (308)
T 1zgk_A 214 -LHNCIYAAGGYDGQ-DQLNSVERYDVE------------------TETWTFVAP---MKHRRSALGITVH--QGRIYVL 268 (308)
T ss_dssp -ETTEEEEECCBCSS-SBCCCEEEEETT------------------TTEEEECCC---CSSCCBSCEEEEE--TTEEEEE
T ss_pred -ECCEEEEEeCCCCC-CccceEEEEeCC------------------CCcEEECCC---CCCCccceEEEEE--CCEEEEE
Confidence 79999999999864 347899999998 789998864 8899999999888 7899999
Q ss_pred cCccC
Q 016774 353 GGMVD 357 (383)
Q Consensus 353 GG~~~ 357 (383)
||...
T Consensus 269 GG~~~ 273 (308)
T 1zgk_A 269 GGYDG 273 (308)
T ss_dssp CCBCS
T ss_pred cCcCC
Confidence 99843
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=6.4e-42 Score=314.81 Aligned_cols=276 Identities=17% Similarity=0.166 Sum_probs=233.5
Q ss_pred hhccccccceeeeecCCCCCCCCCCCcccceeeeCCEEEEEcccc-----CCCCCCCceEEEEeccCcccccceEEcCCC
Q 016774 14 QVTQLESVSCRNISDADGDLVLPNPRASHSLNFVSNCLVLFGGGC-----EGGRHLDDTWVAYVGNDFQGMLKWQKVNSG 88 (383)
Q Consensus 14 ~~~~~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~-----~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 88 (383)
..||+.+.+|+... .+. |.+|.+|++++++++|||+||.. ......+++++|++..+ +|++++ .
T Consensus 16 ~~yd~~~~~W~~~~--~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-----~W~~~~-~ 84 (315)
T 4asc_A 16 VAYDPAANECYCAS--LSS---QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS-----EWLGMP-P 84 (315)
T ss_dssp EEEETTTTEEEEEE--CCC---CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT-----EEEECC-C
T ss_pred EEECCCCCeEecCC--CCC---CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCC-----eEEECC-C
Confidence 46799999998732 222 77999999999999999999962 12333456899998554 999987 4
Q ss_pred CCCCCcceeEEEECCEEEEEcCcc--CCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEE
Q 016774 89 IPSGRFGHTCVVIGDCLVLFGGIN--DRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVI 166 (383)
Q Consensus 89 ~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v 166 (383)
+|.+|.+|+++.++++|||+||.. ......+++++||+ .+++|+++.. +|.+|..|+++..++ +||+
T Consensus 85 ~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~-------~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv 153 (315)
T 4asc_A 85 LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDR-------LSFKWGESDP---LPYVVYGHTVLSHMD-LVYV 153 (315)
T ss_dssp BSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEET-------TTTEEEECCC---CSSCCBSCEEEEETT-EEEE
T ss_pred CCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECC-------CCCcEeECCC---CCCcccceeEEEECC-EEEE
Confidence 789999999999999999999976 33567899999999 6999999865 789999999999887 9999
Q ss_pred EcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccc
Q 016774 167 HAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFK 246 (383)
Q Consensus 167 ~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~ 246 (383)
+||.......++++++||+.++ +|++++ ++|.+|..|+++.+ +++||++||.. .....+++++||+++ .+
T Consensus 154 ~GG~~~~~~~~~~~~~yd~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~yd~~~--~~ 223 (315)
T 4asc_A 154 IGGKGSDRKCLNKMCVYDPKKF----EWKELA--PMQTARSLFGATVH-DGRIIVAAGVT-DTGLTSSAEVYSITD--NK 223 (315)
T ss_dssp ECCBCTTSCBCCCEEEEETTTT----EEEECC--CCSSCCBSCEEEEE-TTEEEEEEEEC-SSSEEEEEEEEETTT--TE
T ss_pred EeCCCCCCcccceEEEEeCCCC----eEEECC--CCCCchhceEEEEE-CCEEEEEeccC-CCCccceEEEEECCC--Ce
Confidence 9998656667899999999999 999998 78999999999999 59999999985 345688999999999 99
Q ss_pred eEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCC----C----CCCCcEEEEEcCCCcccccccccccccccc
Q 016774 247 WVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSA----R----RRKDDFWVLDTKAIPFTSVQQSMLDSRGLL 318 (383)
Q Consensus 247 W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~----~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 318 (383)
|+.+ ..+|.+|.+|++++ .+++||++||.+.. + ...+++++||++
T Consensus 224 W~~~--------~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~------------------ 276 (315)
T 4asc_A 224 WAPF--------EAFPQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEE------------------ 276 (315)
T ss_dssp EEEE--------CCCSSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETT------------------
T ss_pred EEEC--------CCCCCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEecCC------------------
Confidence 9999 46899999999887 79999999998642 1 246789999998
Q ss_pred cccceeeccCCCCCCCccceeeeecCCCcEEEEEcCc
Q 016774 319 LNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGM 355 (383)
Q Consensus 319 ~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~l~v~GG~ 355 (383)
+++|+.+ +|.+|..|+++++ ++++|++...
T Consensus 277 ~~~W~~~-----~~~~r~~~~~~~~--~~~l~v~~~~ 306 (315)
T 4asc_A 277 EKKWEGV-----LREIAYAAGATFL--PVRLNVLRLT 306 (315)
T ss_dssp TTEEEEE-----ESCSSCCSSCEEE--EEEECGGGSE
T ss_pred CChhhhh-----ccCCcCccceEEe--CCEEEEEEeh
Confidence 7899988 5778999999888 8899999765
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=7.8e-41 Score=306.24 Aligned_cols=263 Identities=16% Similarity=0.162 Sum_probs=230.5
Q ss_pred hccccccceeeeecCCCCCCCCCCCcccceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCc
Q 016774 15 VTQLESVSCRNISDADGDLVLPNPRASHSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRF 94 (383)
Q Consensus 15 ~~~~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~ 94 (383)
.|++.+.+|+.+... |.+|.+|++++++++|||+||.. ....+++++|++..+ +|++++ .+|.+|.
T Consensus 28 ~~d~~~~~W~~~~~~------p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~-----~W~~~~-~~p~~r~ 93 (306)
T 3ii7_A 28 YFNPKDYSWTDIRCP------FEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKD-----SWYSKL-GPPTPRD 93 (306)
T ss_dssp EEETTTTEEEECCCC------SCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTT-----EEEEEE-CCSSCCB
T ss_pred EecCCCCCEecCCCC------CcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCC-----eEEECC-CCCcccc
Confidence 578999999998643 88999999999999999999976 567889999999655 999987 4789999
Q ss_pred ceeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCC
Q 016774 95 GHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYG 174 (383)
Q Consensus 95 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~ 174 (383)
+|+++.++++|||+||.+.....++++++||+ .+++|+++.. +|.+|..|+++..++ +||++||.....
T Consensus 94 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~-------~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~~ 162 (306)
T 3ii7_A 94 SLAACAAEGKIYTSGGSEVGNSALYLFECYDT-------RTESWHTKPS---MLTQRCSHGMVEANG-LIYVCGGSLGNN 162 (306)
T ss_dssp SCEEEEETTEEEEECCBBTTBSCCCCEEEEET-------TTTEEEEECC---CSSCCBSCEEEEETT-EEEEECCEESCT
T ss_pred ceeEEEECCEEEEECCCCCCCcEeeeEEEEeC-------CCCceEeCCC---CcCCcceeEEEEECC-EEEEECCCCCCC
Confidence 99999999999999998755667899999999 6999999865 789999999998877 999999986544
Q ss_pred C---cccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEec
Q 016774 175 L---RLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIP 251 (383)
Q Consensus 175 ~---~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~ 251 (383)
. .++++++||+.++ +|++++ ++|.+|..|+++.+ +++||++||... ....+++++||+.+ ++|+.+
T Consensus 163 ~~~~~~~~~~~yd~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~i~v~GG~~~-~~~~~~~~~yd~~~--~~W~~~- 231 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPATE----TWTELC--PMIEARKNHGLVFV-KDKIFAVGGQNG-LGGLDNVEYYDIKL--NEWKMV- 231 (306)
T ss_dssp TTCEECCCEEEEETTTT----EEEEEC--CCSSCCBSCEEEEE-TTEEEEECCEET-TEEBCCEEEEETTT--TEEEEC-
T ss_pred CcccccceEEEeCCCCC----eEEECC--CccchhhcceEEEE-CCEEEEEeCCCC-CCCCceEEEeeCCC--CcEEEC-
Confidence 3 2899999999999 999998 78999999999999 699999999853 35688999999999 999999
Q ss_pred ccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccCCCC
Q 016774 252 YELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYK 331 (383)
Q Consensus 252 ~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 331 (383)
..+|.+|.+|++++ .+++|||+||.+... ..+++++||++ +.+|+.+.. +
T Consensus 232 -------~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~-~~~~~~~yd~~------------------~~~W~~~~~---~ 281 (306)
T 3ii7_A 232 -------SPMPWKGVTVKCAA-VGSIVYVLAGFQGVG-RLGHILEYNTE------------------TDKWVANSK---V 281 (306)
T ss_dssp -------CCCSCCBSCCEEEE-ETTEEEEEECBCSSS-BCCEEEEEETT------------------TTEEEEEEE---E
T ss_pred -------CCCCCCccceeEEE-ECCEEEEEeCcCCCe-eeeeEEEEcCC------------------CCeEEeCCC---c
Confidence 57899999999887 799999999997643 57899999998 789999865 7
Q ss_pred CCCccceeeeec
Q 016774 332 PNCRSFHRACPD 343 (383)
Q Consensus 332 p~~r~~~~~~~~ 343 (383)
|.+|.+|+++++
T Consensus 282 ~~~r~~~~~~~~ 293 (306)
T 3ii7_A 282 RAFPVTSCLICV 293 (306)
T ss_dssp ECCSCTTCEEEE
T ss_pred ccccceeEEEEE
Confidence 899999999877
No 4
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-41 Score=310.54 Aligned_cols=275 Identities=16% Similarity=0.175 Sum_probs=232.5
Q ss_pred hhccccccceeeeecCCCCCCCCCCCcccceeeeCCEEEEEccccCC-----CCCCCceEEEEeccCcccccceEEcCCC
Q 016774 14 QVTQLESVSCRNISDADGDLVLPNPRASHSLNFVSNCLVLFGGGCEG-----GRHLDDTWVAYVGNDFQGMLKWQKVNSG 88 (383)
Q Consensus 14 ~~~~~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~-----~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 88 (383)
..|++.+.+|+..... . |.||.+|++++.+++|||+||.... ....+++++|+...+ +|++++ .
T Consensus 27 ~~yd~~~~~W~~~~~~--~---~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-----~W~~~~-~ 95 (318)
T 2woz_A 27 VAYDPMENECYLTALA--E---QIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS-----EWVGLP-P 95 (318)
T ss_dssp EEEETTTTEEEEEEEC--T---TSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT-----EEEECS-C
T ss_pred EEECCCCCceecccCC--c---cCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC-----cEEECC-C
Confidence 5689999999985432 2 6799999999999999999995321 122345889998554 999997 4
Q ss_pred CCCCCcceeEEEECCEEEEEcCccC-CCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEE
Q 016774 89 IPSGRFGHTCVVIGDCLVLFGGIND-RGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIH 167 (383)
Q Consensus 89 ~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~ 167 (383)
+|.+|..|+++.++++|||+||... ....++++++||+ .+++|+++.. +|.+|.+|+++..++ +||++
T Consensus 96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~-------~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~ 164 (318)
T 2woz_A 96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDP-------VAAKWSEVKN---LPIKVYGHNVISHNG-MIYCL 164 (318)
T ss_dssp BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEET-------TTTEEEEECC---CSSCEESCEEEEETT-EEEEE
T ss_pred CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeC-------CCCCEeECCC---CCCcccccEEEEECC-EEEEE
Confidence 7889999999999999999999863 4556889999999 6999999875 789999999998777 99999
Q ss_pred cccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccce
Q 016774 168 AGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKW 247 (383)
Q Consensus 168 GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W 247 (383)
||.......++++++||+.++ +|++++ ++|.+|..|+++.+ +++|||+||... ....+++++||+++ ++|
T Consensus 165 GG~~~~~~~~~~~~~yd~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~~-~~~~~~~~~yd~~~--~~W 234 (318)
T 2woz_A 165 GGKTDDKKCTNRVFIYNPKKG----DWKDLA--PMKTPRSMFGVAIH-KGKIVIAGGVTE-DGLSASVEAFDLKT--NKW 234 (318)
T ss_dssp CCEESSSCBCCCEEEEETTTT----EEEEEC--CCSSCCBSCEEEEE-TTEEEEEEEEET-TEEEEEEEEEETTT--CCE
T ss_pred cCCCCCCCccceEEEEcCCCC----EEEECC--CCCCCcccceEEEE-CCEEEEEcCcCC-CCccceEEEEECCC--CeE
Confidence 998666667899999999999 999998 78899999999998 599999999863 44678999999999 999
Q ss_pred EEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCC--------CCCCCcEEEEEcCCCccccccccccccccccc
Q 016774 248 VQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSA--------RRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLL 319 (383)
Q Consensus 248 ~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 319 (383)
+++ ..+|.+|.+|++++ .+++||++||.+.. ....+++|+||++ +
T Consensus 235 ~~~--------~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~------------------~ 287 (318)
T 2woz_A 235 EVM--------TEFPQERSSISLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD------------------K 287 (318)
T ss_dssp EEC--------CCCSSCCBSCEEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETT------------------T
T ss_pred EEC--------CCCCCcccceEEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCC------------------C
Confidence 999 46899999999887 89999999998753 1347899999998 7
Q ss_pred ccceeeccCCCCCCCccceeeeecCCCcEEEEEcC
Q 016774 320 NMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGG 354 (383)
Q Consensus 320 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~~l~v~GG 354 (383)
.+|+++ +|.+|++|+++++ +++|||+..
T Consensus 288 ~~W~~~-----~~~~r~~~~~~~~--~~~iyi~~~ 315 (318)
T 2woz_A 288 KEWAGM-----LKEIRYASGASCL--ATRLNLFKL 315 (318)
T ss_dssp TEEEEE-----ESCCGGGTTCEEE--EEEEEGGGC
T ss_pred CEehhh-----cccccccccceee--CCEEEEEEe
Confidence 899988 5889999999988 889998853
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=303.12 Aligned_cols=265 Identities=15% Similarity=0.225 Sum_probs=228.2
Q ss_pred hhccccccceeeeecCCCCCCCCCCCcccceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCC
Q 016774 14 QVTQLESVSCRNISDADGDLVLPNPRASHSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGR 93 (383)
Q Consensus 14 ~~~~~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r 93 (383)
..|++.+.+|+.+.. . |.+|.+|++++++++|||+||... ....+++++|++..+ +|++++ .+|.+|
T Consensus 33 ~~~d~~~~~W~~~~~---~---p~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~-----~W~~~~-~~p~~r 99 (302)
T 2xn4_A 33 ECYDFKEERWHQVAE---L---PSRRCRAGMVYMAGLVFAVGGFNG-SLRVRTVDSYDPVKD-----QWTSVA-NMRDRR 99 (302)
T ss_dssp EEEETTTTEEEEECC---C---SSCCBSCEEEEETTEEEEESCBCS-SSBCCCEEEEETTTT-----EEEEEC-CCSSCC
T ss_pred EEEcCcCCcEeEccc---C---CcccccceEEEECCEEEEEeCcCC-CccccceEEECCCCC-----ceeeCC-CCCccc
Confidence 357888999999853 3 889999999999999999999643 456789999999555 999997 478899
Q ss_pred cceeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCC
Q 016774 94 FGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLY 173 (383)
Q Consensus 94 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~ 173 (383)
..|+++.++++||++||... ...++++++||+ .+++|+++.+ +|.+|..|+++..++ +||++||....
T Consensus 100 ~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~-------~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~ 167 (302)
T 2xn4_A 100 STLGAAVLNGLLYAVGGFDG-STGLSSVEAYNI-------KSNEWFHVAP---MNTRRSSVGVGVVGG-LLYAVGGYDVA 167 (302)
T ss_dssp BSCEEEEETTEEEEEEEECS-SCEEEEEEEEET-------TTTEEEEECC---CSSCCBSCEEEEETT-EEEEECCEETT
T ss_pred cceEEEEECCEEEEEcCCCC-CccCceEEEEeC-------CCCeEeecCC---CCCcccCceEEEECC-EEEEEeCCCCC
Confidence 99999999999999999864 456789999999 6999999865 788999999998877 99999998644
Q ss_pred C-CcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecc
Q 016774 174 G-LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPY 252 (383)
Q Consensus 174 ~-~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~ 252 (383)
. ..++++++||+.++ +|++++ ++|.+|..|+++.+ +++||++||.. .....+++++||+++ ++|+.+
T Consensus 168 ~~~~~~~~~~yd~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~yd~~~--~~W~~~-- 235 (302)
T 2xn4_A 168 SRQCLSTVECYNATTN----EWTYIA--EMSTRRSGAGVGVL-NNLLYAVGGHD-GPLVRKSVEVYDPTT--NAWRQV-- 235 (302)
T ss_dssp TTEECCCEEEEETTTT----EEEEEC--CCSSCCBSCEEEEE-TTEEEEECCBS-SSSBCCCEEEEETTT--TEEEEE--
T ss_pred CCccccEEEEEeCCCC----cEEECC--CCccccccccEEEE-CCEEEEECCCC-CCcccceEEEEeCCC--CCEeeC--
Confidence 3 34789999999999 999997 78899999999999 59999999985 345678999999999 999999
Q ss_pred cccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccCCCCC
Q 016774 253 ELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKP 332 (383)
Q Consensus 253 ~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p 332 (383)
..+|.+|.+|++++ .+++||++||.+.. ...+++++||++ +++|+.+.. .+|
T Consensus 236 ------~~~~~~r~~~~~~~-~~~~i~v~GG~~~~-~~~~~v~~yd~~------------------~~~W~~~~~--~~~ 287 (302)
T 2xn4_A 236 ------ADMNMCRRNAGVCA-VNGLLYVVGGDDGS-CNLASVEYYNPT------------------TDKWTVVSS--CMS 287 (302)
T ss_dssp ------CCCSSCCBSCEEEE-ETTEEEEECCBCSS-SBCCCEEEEETT------------------TTEEEECSS--CCS
T ss_pred ------CCCCCccccCeEEE-ECCEEEEECCcCCC-cccccEEEEcCC------------------CCeEEECCc--ccC
Confidence 46889999998886 79999999998764 347899999998 789998852 478
Q ss_pred CCccceeeeec
Q 016774 333 NCRSFHRACPD 343 (383)
Q Consensus 333 ~~r~~~~~~~~ 343 (383)
.+|..|+++++
T Consensus 288 ~~r~~~~~~~~ 298 (302)
T 2xn4_A 288 TGRSYAGVTVI 298 (302)
T ss_dssp SCCBSCEEEEE
T ss_pred cccccceEEEe
Confidence 99999999887
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.8e-40 Score=304.13 Aligned_cols=264 Identities=19% Similarity=0.209 Sum_probs=228.9
Q ss_pred hhccccccceeeeecCCCCCCCCCCCcccceeeeCCEEEEEcccc---CCCCCCCceEEEEeccCcccccceEEcCCCCC
Q 016774 14 QVTQLESVSCRNISDADGDLVLPNPRASHSLNFVSNCLVLFGGGC---EGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIP 90 (383)
Q Consensus 14 ~~~~~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~---~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p 90 (383)
..|++.+.+|+.+.. . |.+|.+|++++++++|||+||.. ......+++++|++.++ +|++++ .+|
T Consensus 42 ~~~d~~~~~W~~~~~---~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~-----~W~~~~-~~p 109 (308)
T 1zgk_A 42 EAYNPSNGTWLRLAD---L---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN-----QWSPCA-PMS 109 (308)
T ss_dssp EEEETTTTEEEECCC---C---SSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTT-----EEEECC-CCS
T ss_pred EEEcCCCCeEeECCC---C---CcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCC-----eEeECC-CCC
Confidence 457899999999953 3 88999999999999999999964 44456789999999555 999997 478
Q ss_pred CCCcceeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEccc
Q 016774 91 SGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGI 170 (383)
Q Consensus 91 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~ 170 (383)
.+|..|+++.++++||++||... ...++++++||+ .+++|+++.. +|.+|..|+++..++ +||++||.
T Consensus 110 ~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~-------~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~ 177 (308)
T 1zgk_A 110 VPRNRIGVGVIDGHIYAVGGSHG-CIHHNSVERYEP-------ERDEWHLVAP---MLTRRIGVGVAVLNR-LLYAVGGF 177 (308)
T ss_dssp SCCBTCEEEEETTEEEEECCEET-TEECCCEEEEET-------TTTEEEECCC---CSSCCBSCEEEEETT-EEEEECCB
T ss_pred cCccccEEEEECCEEEEEcCCCC-CcccccEEEECC-------CCCeEeECCC---CCccccceEEEEECC-EEEEEeCC
Confidence 89999999999999999999865 345789999999 6999999875 789999999999876 99999998
Q ss_pred CCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEe
Q 016774 171 GLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 171 ~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i 250 (383)
+... .++++++||+.++ +|++++ ++|.+|..|+++.+ +++||++||.. .....+++++||+.+ ++|+++
T Consensus 178 ~~~~-~~~~~~~yd~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~v~~yd~~~--~~W~~~ 246 (308)
T 1zgk_A 178 DGTN-RLNSAECYYPERN----EWRMIT--AMNTIRSGAGVCVL-HNCIYAAGGYD-GQDQLNSVERYDVET--ETWTFV 246 (308)
T ss_dssp CSSC-BCCCEEEEETTTT----EEEECC--CCSSCCBSCEEEEE-TTEEEEECCBC-SSSBCCCEEEEETTT--TEEEEC
T ss_pred CCCC-cCceEEEEeCCCC----eEeeCC--CCCCccccceEEEE-CCEEEEEeCCC-CCCccceEEEEeCCC--CcEEEC
Confidence 6543 5899999999999 999997 78899999999999 69999999996 445688999999999 999999
Q ss_pred cccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccCCC
Q 016774 251 PYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGY 330 (383)
Q Consensus 251 ~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 330 (383)
..+|.+|..|++++ .+++|||+||.+.. ...+++++||++ +++|+.+..
T Consensus 247 --------~~~p~~r~~~~~~~-~~~~i~v~GG~~~~-~~~~~v~~yd~~------------------~~~W~~~~~--- 295 (308)
T 1zgk_A 247 --------APMKHRRSALGITV-HQGRIYVLGGYDGH-TFLDSVECYDPD------------------TDTWSEVTR--- 295 (308)
T ss_dssp --------CCCSSCCBSCEEEE-ETTEEEEECCBCSS-CBCCEEEEEETT------------------TTEEEEEEE---
T ss_pred --------CCCCCCccceEEEE-ECCEEEEEcCcCCC-cccceEEEEcCC------------------CCEEeecCC---
Confidence 47899999999887 79999999998763 457899999998 789999855
Q ss_pred CCCCccceeeeec
Q 016774 331 KPNCRSFHRACPD 343 (383)
Q Consensus 331 ~p~~r~~~~~~~~ 343 (383)
+|.+|.+|+++++
T Consensus 296 ~p~~r~~~~~~~l 308 (308)
T 1zgk_A 296 MTSGRSGVGVAVT 308 (308)
T ss_dssp CSSCCBSCEEEEC
T ss_pred CCCCcccceeEeC
Confidence 8999999998764
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=4e-40 Score=308.06 Aligned_cols=279 Identities=18% Similarity=0.198 Sum_probs=216.3
Q ss_pred CCCCcccceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCC-CCCcceeEEEECCEEEEEcCc-c-
Q 016774 36 PNPRASHSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIP-SGRFGHTCVVIGDCLVLFGGI-N- 112 (383)
Q Consensus 36 p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p-~~r~~~~~~~~~~~iyv~GG~-~- 112 (383)
|.+|.+|++++++++|||+||.. .+++|+|++.. .+.+|++++. +| .+|.+|++++++++|||+||. .
T Consensus 7 P~~r~~~~~~~~~~~iyv~GG~~-----~~~~~~~d~~~---~~~~W~~~~~-~p~~~R~~~~~~~~~~~lyv~GG~~~~ 77 (357)
T 2uvk_A 7 PVPFKSGTGAIDNDTVYIGLGSA-----GTAWYKLDTQA---KDKKWTALAA-FPGGPRDQATSAFIDGNLYVFGGIGKN 77 (357)
T ss_dssp SSCCCSCEEEEETTEEEEECGGG-----TTCEEEEETTS---SSCCEEECCC-CTTCCCBSCEEEEETTEEEEECCEEEC
T ss_pred CccccceEEEEECCEEEEEeCcC-----CCeEEEEcccc---CCCCeeECCC-CCCCcCccceEEEECCEEEEEcCCCCC
Confidence 88999999999999999999964 35899999853 1249999975 66 799999999999999999998 2
Q ss_pred --CCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCC----------------
Q 016774 113 --DRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYG---------------- 174 (383)
Q Consensus 113 --~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~---------------- 174 (383)
.....++++++||+ .+++|+++.... |.+|.+|+++..++ +|||+||.+...
T Consensus 78 ~~~~~~~~~~v~~yd~-------~~~~W~~~~~~~--p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~ 147 (357)
T 2uvk_A 78 SEGLTQVFNDVHKYNP-------KTNSWVKLMSHA--PMGMAGHVTFVHNG-KAYVTGGVNQNIFNGYFEDLNEAGKDST 147 (357)
T ss_dssp TTSCEEECCCEEEEET-------TTTEEEECSCCC--SSCCSSEEEEEETT-EEEEEECCCHHHHHHHHHHHHHHTTCHH
T ss_pred CCccceeeccEEEEeC-------CCCcEEECCCCC--CcccccceEEEECC-EEEEEeCcCCCcCcccccchhhcCCccc
Confidence 22345899999999 699999998643 69999999988766 999999974321
Q ss_pred -----------------CcccceEEEeccCCcccCceEEcccCCCCCCCCC-ceEEEEcCCEEEEEcccCCCCCccccEE
Q 016774 175 -----------------LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSG-HSLTRIGGNRTVLFGGRGVGYEVLNDVW 236 (383)
Q Consensus 175 -----------------~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~-~~~~~~~~~~i~v~GG~~~~~~~~~~v~ 236 (383)
..++++++||+.++ +|+.+. ++|.+|.. |+++.+ +++|||+||........++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~----~W~~~~--~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~ 220 (357)
T 2uvk_A 148 AIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ----QWSYAG--ESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVF 220 (357)
T ss_dssp HHHHHHHHHHSSCGGGGCCCCEEEEEETTTT----EEEEEE--ECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEE
T ss_pred chhhhhhhhccccccccCCcccEEEEeCCCC----cEEECC--CCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceE
Confidence 23589999999999 999997 66766554 888888 699999999865555678899
Q ss_pred EEEc--ccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCC----------------CCCCCcEEEEE
Q 016774 237 FLDV--YEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSA----------------RRRKDDFWVLD 298 (383)
Q Consensus 237 ~~~~--~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~----------------~~~~~~~~~~d 298 (383)
.||+ ++ .+|+++. ....|.+|.+|++++ .+++|||+||.+.. ....+++++||
T Consensus 221 ~~d~d~~~--~~W~~~~------~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd 291 (357)
T 2uvk_A 221 ELDFTGNN--LKWNKLA------PVSSPDGVAGGFAGI-SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHL 291 (357)
T ss_dssp EEECC-----CEEEECC------CSSTTTCCBSCEEEE-ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEE
T ss_pred EEEecCCC--CcEEecC------CCCCCcccccceEEE-ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEe
Confidence 9987 77 9999994 122344456777776 89999999997532 12246789999
Q ss_pred cCCCcccccccccccccccccccceeeccCCCCCCCccceeeeecCCCcEEEEEcCccCCccccCCCccccccCeeeEEE
Q 016774 299 TKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVE 378 (383)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~ 378 (383)
++ +.+|+.+.. +|.+|.+|+++.+ +++|||+||...+.. ..+|++.++
T Consensus 292 ~~------------------~~~W~~~~~---~p~~r~~~~~~~~--~~~i~v~GG~~~~~~---------~~~~v~~l~ 339 (357)
T 2uvk_A 292 WH------------------NGKWDKSGE---LSQGRAYGVSLPW--NNSLLIIGGETAGGK---------AVTDSVLIT 339 (357)
T ss_dssp CC---------------------CEEEEE---CSSCCBSSEEEEE--TTEEEEEEEECGGGC---------EEEEEEEEE
T ss_pred cC------------------CCceeeCCC---CCCCcccceeEEe--CCEEEEEeeeCCCCC---------EeeeEEEEE
Confidence 98 789999855 8999999999887 889999999854331 235677666
Q ss_pred eec
Q 016774 379 LVP 381 (383)
Q Consensus 379 ~~~ 381 (383)
++.
T Consensus 340 ~~~ 342 (357)
T 2uvk_A 340 VKD 342 (357)
T ss_dssp C-C
T ss_pred EcC
Confidence 654
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=298.13 Aligned_cols=245 Identities=18% Similarity=0.254 Sum_probs=214.2
Q ss_pred CCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEEECCEEEEEcCccCCCCCccceeeeecc
Q 016774 48 SNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIA 127 (383)
Q Consensus 48 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~ 127 (383)
.+.||++||... .++++.|++..+ +|+++. .+|.+|.+|+++.++++|||+||.. ...++++++||+
T Consensus 11 ~~~l~~~GG~~~----~~~~~~~d~~~~-----~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~- 77 (306)
T 3ii7_A 11 HDYRIALFGGSQ----PQSCRYFNPKDY-----SWTDIR-CPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNV- 77 (306)
T ss_dssp CCEEEEEECCSS----TTSEEEEETTTT-----EEEECC-CCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEET-
T ss_pred cceEEEEeCCCC----CceEEEecCCCC-----CEecCC-CCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeC-
Confidence 378999999644 789999999655 999997 4788999999999999999999986 556899999999
Q ss_pred cccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCC
Q 016774 128 CHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARS 207 (383)
Q Consensus 128 ~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~ 207 (383)
.+++|+++.. +|.+|..|+++.+++ +||++||.+.....++++++||+.++ +|++++ ++|.+|.
T Consensus 78 ------~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~----~W~~~~--~~p~~r~ 141 (306)
T 3ii7_A 78 ------VKDSWYSKLG---PPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTE----SWHTKP--SMLTQRC 141 (306)
T ss_dssp ------TTTEEEEEEC---CSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTT----EEEEEC--CCSSCCB
T ss_pred ------CCCeEEECCC---CCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCC----ceEeCC--CCcCCcc
Confidence 6999999865 789999999999877 99999998655567899999999999 999997 7899999
Q ss_pred CceEEEEcCCEEEEEcccCCCCC---ccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCc
Q 016774 208 GHSLTRIGGNRTVLFGGRGVGYE---VLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGE 284 (383)
Q Consensus 208 ~~~~~~~~~~~i~v~GG~~~~~~---~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~ 284 (383)
.|+++.+ +++||++||...... ..+++++||+.+ .+|+++ ..+|.+|.+|++++ .+++||++||.
T Consensus 142 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~--~~W~~~--------~~~p~~r~~~~~~~-~~~~i~v~GG~ 209 (306)
T 3ii7_A 142 SHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPAT--ETWTEL--------CPMIEARKNHGLVF-VKDKIFAVGGQ 209 (306)
T ss_dssp SCEEEEE-TTEEEEECCEESCTTTCEECCCEEEEETTT--TEEEEE--------CCCSSCCBSCEEEE-ETTEEEEECCE
T ss_pred eeEEEEE-CCEEEEECCCCCCCCcccccceEEEeCCCC--CeEEEC--------CCccchhhcceEEE-ECCEEEEEeCC
Confidence 9999998 599999999854332 388999999999 999999 46899999999987 79999999998
Q ss_pred CCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccCCCCCCCccceeeeecCCCcEEEEEcCccC
Q 016774 285 DSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVD 357 (383)
Q Consensus 285 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~l~v~GG~~~ 357 (383)
+.. ...+++++||++ +.+|+.+.. +|.+|.+|+++++ +++|||+||...
T Consensus 210 ~~~-~~~~~~~~yd~~------------------~~~W~~~~~---~p~~r~~~~~~~~--~~~i~v~GG~~~ 258 (306)
T 3ii7_A 210 NGL-GGLDNVEYYDIK------------------LNEWKMVSP---MPWKGVTVKCAAV--GSIVYVLAGFQG 258 (306)
T ss_dssp ETT-EEBCCEEEEETT------------------TTEEEECCC---CSCCBSCCEEEEE--TTEEEEEECBCS
T ss_pred CCC-CCCceEEEeeCC------------------CCcEEECCC---CCCCccceeEEEE--CCEEEEEeCcCC
Confidence 765 447899999998 788998854 8899999999888 889999999854
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=295.73 Aligned_cols=263 Identities=17% Similarity=0.233 Sum_probs=227.8
Q ss_pred hhccccccceeeeecCCCCCCCCCCCcccceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccc---eEEcCCCCC
Q 016774 14 QVTQLESVSCRNISDADGDLVLPNPRASHSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLK---WQKVNSGIP 90 (383)
Q Consensus 14 ~~~~~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~---W~~~~~~~p 90 (383)
..|++.+.+|+.+... |.+|.+|++++++++|||+||.. .....+++++|++..+ + |+++. .+|
T Consensus 34 ~~~d~~~~~W~~~~~~------p~~r~~~~~~~~~~~l~v~GG~~-~~~~~~~~~~~d~~~~-----~~~~W~~~~-~~p 100 (301)
T 2vpj_A 34 EKYDPKTQEWSFLPSI------TRKRRYVASVSLHDRIYVIGGYD-GRSRLSSVECLDYTAD-----EDGVWYSVA-PMN 100 (301)
T ss_dssp EEEETTTTEEEECCCC------SSCCBSCEEEEETTEEEEECCBC-SSCBCCCEEEEETTCC-----TTCCCEEEC-CCS
T ss_pred EEEcCCCCeEEeCCCC------ChhhccccEEEECCEEEEEcCCC-CCccCceEEEEECCCC-----CCCeeEECC-CCC
Confidence 3568899999998743 78999999999999999999965 4567889999999655 7 99996 478
Q ss_pred CCCcceeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEccc
Q 016774 91 SGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGI 170 (383)
Q Consensus 91 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~ 170 (383)
.+|..|+++.++++||++||... ...++++++||+ .+++|+++.. +|.+|..|+++..++ +||++||.
T Consensus 101 ~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~d~-------~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~ 168 (301)
T 2vpj_A 101 VRRGLAGATTLGDMIYVSGGFDG-SRRHTSMERYDP-------NIDQWSMLGD---MQTAREGAGLVVASG-VIYCLGGY 168 (301)
T ss_dssp SCCBSCEEEEETTEEEEECCBCS-SCBCCEEEEEET-------TTTEEEEEEE---CSSCCBSCEEEEETT-EEEEECCB
T ss_pred CCccceeEEEECCEEEEEcccCC-CcccceEEEEcC-------CCCeEEECCC---CCCCcccceEEEECC-EEEEECCC
Confidence 89999999999999999999864 445789999999 6999999865 789999999998876 99999998
Q ss_pred CCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEe
Q 016774 171 GLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 171 ~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i 250 (383)
+.. ..++++++||+.++ +|++++ ++|.+|..|+++.+ +++||++||.. .....+++++||+++ .+|+++
T Consensus 169 ~~~-~~~~~~~~~d~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~i~v~GG~~-~~~~~~~v~~yd~~~--~~W~~~ 237 (301)
T 2vpj_A 169 DGL-NILNSVEKYDPHTG----HWTNVT--PMATKRSGAGVALL-NDHIYVVGGFD-GTAHLSSVEAYNIRT--DSWTTV 237 (301)
T ss_dssp CSS-CBCCCEEEEETTTT----EEEEEC--CCSSCCBSCEEEEE-TTEEEEECCBC-SSSBCCCEEEEETTT--TEEEEE
T ss_pred CCC-cccceEEEEeCCCC----cEEeCC--CCCcccccceEEEE-CCEEEEEeCCC-CCcccceEEEEeCCC--CcEEEC
Confidence 544 36899999999999 999997 78999999999999 59999999986 344578999999999 999999
Q ss_pred cccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccCCC
Q 016774 251 PYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGY 330 (383)
Q Consensus 251 ~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 330 (383)
..+|.+|..|++++ .+++||++||.+.. ...+++++||++ +++|+.+..
T Consensus 238 --------~~~p~~r~~~~~~~-~~~~i~v~GG~~~~-~~~~~v~~yd~~------------------~~~W~~~~~--- 286 (301)
T 2vpj_A 238 --------TSMTTPRCYVGATV-LRGRLYAIAGYDGN-SLLSSIECYDPI------------------IDSWEVVTS--- 286 (301)
T ss_dssp --------CCCSSCCBSCEEEE-ETTEEEEECCBCSS-SBEEEEEEEETT------------------TTEEEEEEE---
T ss_pred --------CCCCCcccceeEEE-ECCEEEEEcCcCCC-cccccEEEEcCC------------------CCeEEEcCC---
Confidence 46899999999887 79999999998764 346889999998 789999865
Q ss_pred CCCCccceeeeec
Q 016774 331 KPNCRSFHRACPD 343 (383)
Q Consensus 331 ~p~~r~~~~~~~~ 343 (383)
+|.+|..|+++++
T Consensus 287 ~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 287 MGTQRCDAGVCVL 299 (301)
T ss_dssp EEEEEESCEEEEE
T ss_pred CCcccccceEEEe
Confidence 8999999999876
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=293.21 Aligned_cols=252 Identities=20% Similarity=0.323 Sum_probs=214.1
Q ss_pred ceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEEECCEEEEEcCccCCCCCcccee
Q 016774 43 SLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTW 122 (383)
Q Consensus 43 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 122 (383)
..+.+++.||++||... ...+++++|++..+ +|+++. .+|.+|.+|+++.++++|||+||... ....++++
T Consensus 10 ~~~~~~~~i~v~GG~~~--~~~~~~~~~d~~~~-----~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~~ 80 (302)
T 2xn4_A 10 TPMNLPKLMVVVGGQAP--KAIRSVECYDFKEE-----RWHQVA-ELPSRRCRAGMVYMAGLVFAVGGFNG-SLRVRTVD 80 (302)
T ss_dssp -----CEEEEEECCBSS--SBCCCEEEEETTTT-----EEEEEC-CCSSCCBSCEEEEETTEEEEESCBCS-SSBCCCEE
T ss_pred cccCCCCEEEEECCCCC--CCCCcEEEEcCcCC-----cEeEcc-cCCcccccceEEEECCEEEEEeCcCC-CccccceE
Confidence 34456889999999643 46788999999655 999996 57889999999999999999999864 35678999
Q ss_pred eeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCC
Q 016774 123 IGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPS 202 (383)
Q Consensus 123 ~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~ 202 (383)
+||+ .+.+|+++.. +|.+|..|+++.+++ +||++||.... ..++++++||+.++ +|++++ ++
T Consensus 81 ~~d~-------~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~-~~~~~~~~~d~~~~----~W~~~~--~~ 142 (302)
T 2xn4_A 81 SYDP-------VKDQWTSVAN---MRDRRSTLGAAVLNG-LLYAVGGFDGS-TGLSSVEAYNIKSN----EWFHVA--PM 142 (302)
T ss_dssp EEET-------TTTEEEEECC---CSSCCBSCEEEEETT-EEEEEEEECSS-CEEEEEEEEETTTT----EEEEEC--CC
T ss_pred EECC-------CCCceeeCCC---CCccccceEEEEECC-EEEEEcCCCCC-ccCceEEEEeCCCC----eEeecC--CC
Confidence 9999 6999999875 789999999999877 99999998543 46889999999999 999998 78
Q ss_pred CCCCCCceEEEEcCCEEEEEcccCCCC-CccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEE
Q 016774 203 PPARSGHSLTRIGGNRTVLFGGRGVGY-EVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIY 281 (383)
Q Consensus 203 p~~r~~~~~~~~~~~~i~v~GG~~~~~-~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~ 281 (383)
|.+|..|+++.+ +++||++||..... ...+++++||+.+ ++|+.+ ..+|.+|.+|++++ .+++||++
T Consensus 143 p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~--~~W~~~--------~~~p~~r~~~~~~~-~~~~iyv~ 210 (302)
T 2xn4_A 143 NTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATT--NEWTYI--------AEMSTRRSGAGVGV-LNNLLYAV 210 (302)
T ss_dssp SSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTT--TEEEEE--------CCCSSCCBSCEEEE-ETTEEEEE
T ss_pred CCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCC--CcEEEC--------CCCccccccccEEE-ECCEEEEE
Confidence 899999999999 59999999985433 4578999999999 999999 46889999999887 79999999
Q ss_pred cCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccCCCCCCCccceeeeecCCCcEEEEEcCccC
Q 016774 282 GGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVD 357 (383)
Q Consensus 282 GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~l~v~GG~~~ 357 (383)
||.+.. ...+++++||++ +++|+.+.. +|.+|..|+++.. +++|||+||...
T Consensus 211 GG~~~~-~~~~~~~~yd~~------------------~~~W~~~~~---~~~~r~~~~~~~~--~~~i~v~GG~~~ 262 (302)
T 2xn4_A 211 GGHDGP-LVRKSVEVYDPT------------------TNAWRQVAD---MNMCRRNAGVCAV--NGLLYVVGGDDG 262 (302)
T ss_dssp CCBSSS-SBCCCEEEEETT------------------TTEEEEECC---CSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred CCCCCC-cccceEEEEeCC------------------CCCEeeCCC---CCCccccCeEEEE--CCEEEEECCcCC
Confidence 998764 347899999998 789999865 7889999998887 789999999853
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=6.3e-39 Score=292.82 Aligned_cols=250 Identities=18% Similarity=0.243 Sum_probs=216.2
Q ss_pred eeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEEECCEEEEEcCccCCCCCccceeeee
Q 016774 46 FVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQ 125 (383)
Q Consensus 46 ~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d 125 (383)
.++++||++||........++++.|++..+ +|++++ .+|.+|.+|+++.++++||++||... ....+++++||
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~-----~W~~~~-~~p~~r~~~~~~~~~~~l~v~GG~~~-~~~~~~~~~~d 84 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDPKTQ-----EWSFLP-SITRKRRYVASVSLHDRIYVIGGYDG-RSRLSSVECLD 84 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEETTTT-----EEEECC-CCSSCCBSCEEEEETTEEEEECCBCS-SCBCCCEEEEE
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcCCCC-----eEEeCC-CCChhhccccEEEECCEEEEEcCCCC-CccCceEEEEE
Confidence 368899999995555567889999999555 999997 47889999999999999999999863 45688999999
Q ss_pred cccccCCccccc---EEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCC
Q 016774 126 IACHENLGITLS---WRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPS 202 (383)
Q Consensus 126 ~~~~~~~~~~~~---W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~ 202 (383)
+ .+.+ |+++.. +|.+|..|+++..++ +||++||.... ..++++++||+.++ +|++++ ++
T Consensus 85 ~-------~~~~~~~W~~~~~---~p~~r~~~~~~~~~~-~lyv~GG~~~~-~~~~~~~~~d~~~~----~W~~~~--~~ 146 (301)
T 2vpj_A 85 Y-------TADEDGVWYSVAP---MNVRRGLAGATTLGD-MIYVSGGFDGS-RRHTSMERYDPNID----QWSMLG--DM 146 (301)
T ss_dssp T-------TCCTTCCCEEECC---CSSCCBSCEEEEETT-EEEEECCBCSS-CBCCEEEEEETTTT----EEEEEE--EC
T ss_pred C-------CCCCCCeeEECCC---CCCCccceeEEEECC-EEEEEcccCCC-cccceEEEEcCCCC----eEEECC--CC
Confidence 9 5888 999865 789999999999876 99999998643 45889999999999 999998 77
Q ss_pred CCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEc
Q 016774 203 PPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYG 282 (383)
Q Consensus 203 p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~G 282 (383)
|.+|..|+++.+ +++||++||.. .....+++++||+.+ .+|+++ ..+|.+|..|++++ .+++||++|
T Consensus 147 p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~~d~~~--~~W~~~--------~~~p~~r~~~~~~~-~~~~i~v~G 213 (301)
T 2vpj_A 147 QTAREGAGLVVA-SGVIYCLGGYD-GLNILNSVEKYDPHT--GHWTNV--------TPMATKRSGAGVAL-LNDHIYVVG 213 (301)
T ss_dssp SSCCBSCEEEEE-TTEEEEECCBC-SSCBCCCEEEEETTT--TEEEEE--------CCCSSCCBSCEEEE-ETTEEEEEC
T ss_pred CCCcccceEEEE-CCEEEEECCCC-CCcccceEEEEeCCC--CcEEeC--------CCCCcccccceEEE-ECCEEEEEe
Confidence 899999999999 69999999985 345788999999999 999999 46899999999887 799999999
Q ss_pred CcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccCCCCCCCccceeeeecCCCcEEEEEcCccC
Q 016774 283 GEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVD 357 (383)
Q Consensus 283 G~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~l~v~GG~~~ 357 (383)
|.+... ..+++++||++ +.+|+.+.. +|.+|..|+++.+ +++|||+||...
T Consensus 214 G~~~~~-~~~~v~~yd~~------------------~~~W~~~~~---~p~~r~~~~~~~~--~~~i~v~GG~~~ 264 (301)
T 2vpj_A 214 GFDGTA-HLSSVEAYNIR------------------TDSWTTVTS---MTTPRCYVGATVL--RGRLYAIAGYDG 264 (301)
T ss_dssp CBCSSS-BCCCEEEEETT------------------TTEEEEECC---CSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred CCCCCc-ccceEEEEeCC------------------CCcEEECCC---CCCcccceeEEEE--CCEEEEEcCcCC
Confidence 998643 37899999998 788998854 8899999999888 789999999854
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=295.33 Aligned_cols=267 Identities=15% Similarity=0.156 Sum_probs=217.9
Q ss_pred eCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEEECCEEEEEcCcc-----CCCCCccce
Q 016774 47 VSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGIN-----DRGNRHNDT 121 (383)
Q Consensus 47 ~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-----~~~~~~~~~ 121 (383)
+++.||++|| ++++.||+..+ +|+......|.+|.+|+++.++++|||+||.. ......+++
T Consensus 3 ~~~~l~~~GG--------~~~~~yd~~~~-----~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 69 (315)
T 4asc_A 3 LQDLIFMISE--------EGAVAYDPAAN-----ECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYF 69 (315)
T ss_dssp CEEEEEEEET--------TEEEEEETTTT-----EEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEE
T ss_pred cceEEEEEcC--------CceEEECCCCC-----eEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccce
Confidence 4568999999 58999999655 99874433467999999999999999999963 222335679
Q ss_pred eeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCC--CCCcccceEEEeccCCcccCceEEccc
Q 016774 122 WIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGL--YGLRLGDTWVLELSENFCFGSWQQLVT 199 (383)
Q Consensus 122 ~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~--~~~~~~~~~~~d~~~~~~~~~W~~~~~ 199 (383)
++||+ .+.+|+++.. +|.+|..|+++.+++ +||++||... ....++++++||+.++ +|++++
T Consensus 70 ~~~d~-------~~~~W~~~~~---~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~----~W~~~~- 133 (315)
T 4asc_A 70 LQFDH-------LDSEWLGMPP---LPSPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSF----KWGESD- 133 (315)
T ss_dssp EEEET-------TTTEEEECCC---BSSCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTT----EEEECC-
T ss_pred EEecC-------CCCeEEECCC---CCcchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCC----cEeECC-
Confidence 99999 6999999865 789999999999977 9999999752 3467899999999999 999998
Q ss_pred CCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEE
Q 016774 200 HPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVL 279 (383)
Q Consensus 200 ~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~ 279 (383)
++|.+|..|+++.+ +++||++||........+++++||+.+ ++|+++ ..+|.+|..|++++ .+++||
T Consensus 134 -~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~--~~W~~~--------~~~p~~r~~~~~~~-~~~~iy 200 (315)
T 4asc_A 134 -PLPYVVYGHTVLSH-MDLVYVIGGKGSDRKCLNKMCVYDPKK--FEWKEL--------APMQTARSLFGATV-HDGRII 200 (315)
T ss_dssp -CCSSCCBSCEEEEE-TTEEEEECCBCTTSCBCCCEEEEETTT--TEEEEC--------CCCSSCCBSCEEEE-ETTEEE
T ss_pred -CCCCcccceeEEEE-CCEEEEEeCCCCCCcccceEEEEeCCC--CeEEEC--------CCCCCchhceEEEE-ECCEEE
Confidence 78999999999998 599999999965677889999999999 999999 46899999999987 799999
Q ss_pred EEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccCCCCCCCccceeeeecCCCcEEEEEcCccCCc
Q 016774 280 IYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGL 359 (383)
Q Consensus 280 i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~l~v~GG~~~~~ 359 (383)
|+||.+... ..+++++||++ +.+|+.+.+ +|.+|..|+++.+ +++|||+||.....
T Consensus 201 v~GG~~~~~-~~~~~~~yd~~------------------~~~W~~~~~---~p~~r~~~~~~~~--~~~l~v~GG~~~~~ 256 (315)
T 4asc_A 201 VAAGVTDTG-LTSSAEVYSIT------------------DNKWAPFEA---FPQERSSLSLVSL--VGTLYAIGGFATLE 256 (315)
T ss_dssp EEEEECSSS-EEEEEEEEETT------------------TTEEEEECC---CSSCCBSCEEEEE--TTEEEEEEEEEEEE
T ss_pred EEeccCCCC-ccceEEEEECC------------------CCeEEECCC---CCCcccceeEEEE--CCEEEEECCccccC
Confidence 999997643 47899999998 789999865 8999999999888 78999999985321
Q ss_pred cccCCCccccccCeeeEEEee
Q 016774 360 VQPADTSGLRFDGRLLLVELV 380 (383)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~ 380 (383)
..... ......++++.+|++
T Consensus 257 ~~~~~-~~~~~~~~v~~yd~~ 276 (315)
T 4asc_A 257 TESGE-LVPTELNDIWRYNEE 276 (315)
T ss_dssp CTTSC-EEEEEEEEEEEEETT
T ss_pred cCCcc-ccccccCcEEEecCC
Confidence 10011 111334677777764
No 13
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=3.4e-38 Score=318.47 Aligned_cols=286 Identities=16% Similarity=0.194 Sum_probs=227.8
Q ss_pred CCCCcccceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcC-C----CCCCCCcceeEEEE--CCEEEEE
Q 016774 36 PNPRASHSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVN-S----GIPSGRFGHTCVVI--GDCLVLF 108 (383)
Q Consensus 36 p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~----~~p~~r~~~~~~~~--~~~iyv~ 108 (383)
|.+|.+|+++ ++++|||+||... ...+++++|++..+ +|+.+. + .+|.+|.+|+++++ +++|||+
T Consensus 386 p~rr~g~~~~-~~~~iyv~GG~~~--~~~~~v~~yd~~~~-----~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~ 457 (695)
T 2zwa_A 386 INRKFGDVDV-AGNDVFYMGGSNP--YRVNEILQLSIHYD-----KIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLI 457 (695)
T ss_dssp TCCBSCEEEE-CSSCEEEECCBSS--SBCCCEEEEEECSS-----CEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEE
T ss_pred CCCceeEEEE-ECCEEEEECCCCC--CCcCcEEEEECCCC-----eEEEeccCCCCCCCCccccceEEEEEccCCEEEEE
Confidence 6667665544 8999999999755 67899999999655 999986 3 36889999999999 9999999
Q ss_pred cCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCC
Q 016774 109 GGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSEN 188 (383)
Q Consensus 109 GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~ 188 (383)
||.......++++|+||+ .+++|+.+.. +|.+|..|+++.+.+++|||+||.+... ++++||+.++
T Consensus 458 GG~~~~~~~~~dv~~yd~-------~t~~W~~~~~---~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~ 523 (695)
T 2zwa_A 458 GGRKAPHQGLSDNWIFDM-------KTREWSMIKS---LSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEE 523 (695)
T ss_dssp CCBSSTTCBCCCCEEEET-------TTTEEEECCC---CSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTT
T ss_pred cCCCCCCCccccEEEEeC-------CCCcEEECCC---CCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCC
Confidence 999876667899999999 6999999865 7899999999997555999999986443 8999999999
Q ss_pred cccCceEEcc-cCCCCCCCCCceEEEEc-C-CEEEEEcccCCCC-CccccEEEEEcccCccc------eEEecccccCCC
Q 016774 189 FCFGSWQQLV-THPSPPARSGHSLTRIG-G-NRTVLFGGRGVGY-EVLNDVWFLDVYEGFFK------WVQIPYELQNIP 258 (383)
Q Consensus 189 ~~~~~W~~~~-~~~~p~~r~~~~~~~~~-~-~~i~v~GG~~~~~-~~~~~v~~~~~~~~~~~------W~~i~~~~~~~~ 258 (383)
+|+.++ .+..|.+|.+|++++++ + ++|||+||..... ...+++++||+.+ ++ |+.+.
T Consensus 524 ----~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~--~~w~~~~~W~~~~------- 590 (695)
T 2zwa_A 524 ----IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA--ENATEPITVIKKL------- 590 (695)
T ss_dssp ----EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT--TCSSCCEEEEEEE-------
T ss_pred ----ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC--CccccceEEEEcC-------
Confidence 999998 34488999999977763 2 7899999985443 6788999999999 88 88884
Q ss_pred CCCCCCceeeEEEEEcCCEEEEEcCcCCCC--CCCCcEEEEEcCCCcccccccccccccccccccceeeccCCC----CC
Q 016774 259 AGFSLPRVGHSATLILGGRVLIYGGEDSAR--RRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGY----KP 332 (383)
Q Consensus 259 ~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~----~p 332 (383)
...+.+|.+|+++++.+++|||+||.+... ...+++++||++ +.+|+.+..... .+
T Consensus 591 ~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~------------------t~~W~~~~~p~~~~~~~~ 652 (695)
T 2zwa_A 591 QHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL------------------SETLTSIPISRRIWEDHS 652 (695)
T ss_dssp ECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT------------------TTEEEECCCCHHHHHHSC
T ss_pred CCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC------------------CCeEEEeeccccccCCCC
Confidence 223588999999874439999999987653 357899999998 678885543211 12
Q ss_pred CCccceeeeecCCCcEEEEEcCccCCccccCCCccccccCeeeEEEeec
Q 016774 333 NCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELVP 381 (383)
Q Consensus 333 ~~r~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (383)
..+.+|+++.+. +++|||+||... +.+++..++ ++|++|+..
T Consensus 653 p~~~gh~~~~~~-~g~i~v~GGg~~-----cfsfGt~~n-~i~~ldl~~ 694 (695)
T 2zwa_A 653 LMLAGFSLVSTS-MGTIHIIGGGAT-----CYGFGSVTN-VGLKLIAIA 694 (695)
T ss_dssp CCCSSCEEECC----CEEEECCEEE-----CTTSCEEEC-CCEEEEECC
T ss_pred ccceeeeEEEeC-CCEEEEEeCCcc-----CcCcccccc-ceEEEEEEc
Confidence 357788887763 339999999855 555665555 999999875
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4.3e-38 Score=289.67 Aligned_cols=275 Identities=17% Similarity=0.194 Sum_probs=219.8
Q ss_pred CCCCcccceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEEECCEEEEEcCccCC-
Q 016774 36 PNPRASHSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDR- 114 (383)
Q Consensus 36 p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~- 114 (383)
..||.++.. ++.||++||. +++.|++..+ +|...+...|.+|.+|+++..+++||++||....
T Consensus 6 ~~~r~~~~~---~~~i~~~GG~--------~~~~yd~~~~-----~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~ 69 (318)
T 2woz_A 6 DIPRHGMFV---KDLILLVNDT--------AAVAYDPMEN-----ECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDE 69 (318)
T ss_dssp SSCCCCCSE---EEEEEEECSS--------EEEEEETTTT-----EEEEEEECTTSCSSEEEEECSSSCEEEEESSCC--
T ss_pred cccccccee---cchhhhcccc--------ceEEECCCCC-----ceecccCCccCCccceEEEEECCEEEEECCcccCc
Confidence 346765543 4799999993 4788998555 9998643446799999999999999999996321
Q ss_pred -C---CCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCC-CCCcccceEEEeccCCc
Q 016774 115 -G---NRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGL-YGLRLGDTWVLELSENF 189 (383)
Q Consensus 115 -~---~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~-~~~~~~~~~~~d~~~~~ 189 (383)
. ...+++++||+ .+.+|+++.. +|.+|..|+++.+++ +||++||... ....++++++||+.++
T Consensus 70 ~~~~~~~~~~~~~~d~-------~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~- 137 (318)
T 2woz_A 70 ENKDQPLQSYFFQLDN-------VSSEWVGLPP---LPSARCLFGLGEVDD-KIYVVAGKDLQTEASLDSVLCYDPVAA- 137 (318)
T ss_dssp -----CCCBEEEEEET-------TTTEEEECSC---BSSCBCSCEEEEETT-EEEEEEEEBTTTCCEEEEEEEEETTTT-
T ss_pred cccCCCccccEEEEeC-------CCCcEEECCC---CCccccccceEEECC-EEEEEcCccCCCCcccceEEEEeCCCC-
Confidence 1 22445999999 6999999865 789999999999877 9999999863 3457899999999999
Q ss_pred ccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeE
Q 016774 190 CFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHS 269 (383)
Q Consensus 190 ~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~ 269 (383)
+|++++ ++|.+|..|+++.+ +++||++||........+++++||+.+ ++|+++ ..+|.+|..|+
T Consensus 138 ---~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~--~~W~~~--------~~~p~~r~~~~ 201 (318)
T 2woz_A 138 ---KWSEVK--NLPIKVYGHNVISH-NGMIYCLGGKTDDKKCTNRVFIYNPKK--GDWKDL--------APMKTPRSMFG 201 (318)
T ss_dssp ---EEEEEC--CCSSCEESCEEEEE-TTEEEEECCEESSSCBCCCEEEEETTT--TEEEEE--------CCCSSCCBSCE
T ss_pred ---CEeECC--CCCCcccccEEEEE-CCEEEEEcCCCCCCCccceEEEEcCCC--CEEEEC--------CCCCCCcccce
Confidence 999998 78999999999998 699999999865667789999999999 999999 46889999999
Q ss_pred EEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccCCCCCCCccceeeeecCCCcEE
Q 016774 270 ATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYL 349 (383)
Q Consensus 270 ~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~l 349 (383)
+++ .+++|||+||.+... ..+++++||++ +++|+.+.. +|.+|..|+++.. +++|
T Consensus 202 ~~~-~~~~iyv~GG~~~~~-~~~~~~~yd~~------------------~~~W~~~~~---~p~~r~~~~~~~~--~~~i 256 (318)
T 2woz_A 202 VAI-HKGKIVIAGGVTEDG-LSASVEAFDLK------------------TNKWEVMTE---FPQERSSISLVSL--AGSL 256 (318)
T ss_dssp EEE-ETTEEEEEEEEETTE-EEEEEEEEETT------------------TCCEEECCC---CSSCCBSCEEEEE--TTEE
T ss_pred EEE-ECCEEEEEcCcCCCC-ccceEEEEECC------------------CCeEEECCC---CCCcccceEEEEE--CCEE
Confidence 887 899999999987643 46789999998 788999855 8899999999888 7899
Q ss_pred EEEcCccCCccccCCCccccccCeeeEEEee
Q 016774 350 YVFGGMVDGLVQPADTSGLRFDGRLLLVELV 380 (383)
Q Consensus 350 ~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (383)
||+||.......... ......+++|.+|++
T Consensus 257 ~v~GG~~~~~~~~~~-~~~~~~~~v~~yd~~ 286 (318)
T 2woz_A 257 YAIGGFAMIQLESKE-FAPTEVNDIWKYEDD 286 (318)
T ss_dssp EEECCBCCBC----C-CBCCBCCCEEEEETT
T ss_pred EEECCeeccCCCCce-eccceeeeEEEEeCC
Confidence 999998543211111 111334677777764
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.4e-36 Score=283.96 Aligned_cols=257 Identities=20% Similarity=0.212 Sum_probs=203.3
Q ss_pred hcccc--ccceeeeecCCCCCCCC-CCCcccceeeeCCEEEEEccc-c---CCCCCCCceEEEEeccCcccccceEEcCC
Q 016774 15 VTQLE--SVSCRNISDADGDLVLP-NPRASHSLNFVSNCLVLFGGG-C---EGGRHLDDTWVAYVGNDFQGMLKWQKVNS 87 (383)
Q Consensus 15 ~~~~~--~~~W~~~~~~~~~~~~p-~~r~~~~~~~~~~~i~v~GG~-~---~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 87 (383)
.|++. +.+|+.++.. | .+|.+|++++++++|||+||. . ......+++++|++..+ +|++++.
T Consensus 35 ~~d~~~~~~~W~~~~~~------p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~-----~W~~~~~ 103 (357)
T 2uvk_A 35 KLDTQAKDKKWTALAAF------PGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN-----SWVKLMS 103 (357)
T ss_dssp EEETTSSSCCEEECCCC------TTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT-----EEEECSC
T ss_pred EEccccCCCCeeECCCC------CCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCC-----cEEECCC
Confidence 45665 4899998653 6 799999999999999999997 2 23456789999999655 9999986
Q ss_pred CCCCCCcceeEEEECCEEEEEcCccCCC---------------------------------CCccceeeeecccccCCcc
Q 016774 88 GIPSGRFGHTCVVIGDCLVLFGGINDRG---------------------------------NRHNDTWIGQIACHENLGI 134 (383)
Q Consensus 88 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~---------------------------------~~~~~~~~~d~~~~~~~~~ 134 (383)
.+|.+|.+|++++++++|||+||..... ..++++++||+ .
T Consensus 104 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~-------~ 176 (357)
T 2uvk_A 104 HAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP-------S 176 (357)
T ss_dssp CCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET-------T
T ss_pred CCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC-------C
Confidence 5569999999999999999999975321 24689999999 6
Q ss_pred cccEEEccCCCCCCCcccc-ceeEEECCcEEEEEcccCCCCCcccceEEEec--cCCcccCceEEcccCCCCCCCCCceE
Q 016774 135 TLSWRLLDVGSIAPPARGA-HAACCIDNRKMVIHAGIGLYGLRLGDTWVLEL--SENFCFGSWQQLVTHPSPPARSGHSL 211 (383)
Q Consensus 135 ~~~W~~~~~~~~~p~~r~~-~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~--~~~~~~~~W~~~~~~~~p~~r~~~~~ 211 (383)
+++|+.+.. +|.+|.. |+++..++ +|||+||....+...+++++||+ .++ +|++++..+.|.+|..|++
T Consensus 177 ~~~W~~~~~---~p~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~----~W~~~~~~~~~~~~~~~~~ 248 (357)
T 2uvk_A 177 TQQWSYAGE---SPWYGTAGAAVVNKGD-KTWLINGEAKPGLRTDAVFELDFTGNNL----KWNKLAPVSSPDGVAGGFA 248 (357)
T ss_dssp TTEEEEEEE---CSSCCCBSCEEEEETT-EEEEECCEEETTEECCCEEEEECC---C----EEEECCCSSTTTCCBSCEE
T ss_pred CCcEEECCC---CCCCCcccccEEEECC-EEEEEeeecCCCcccCceEEEEecCCCC----cEEecCCCCCCcccccceE
Confidence 999999865 6666555 88887776 99999998655556889999987 777 9999984345556778888
Q ss_pred EEEcCCEEEEEcccCCC----------------CCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcC
Q 016774 212 TRIGGNRTVLFGGRGVG----------------YEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILG 275 (383)
Q Consensus 212 ~~~~~~~i~v~GG~~~~----------------~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~ 275 (383)
+.+ +++|||+||.... ....+++++||+++ .+|+++ +.+|.+|..|++++ .+
T Consensus 249 ~~~-~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~--~~W~~~--------~~~p~~r~~~~~~~-~~ 316 (357)
T 2uvk_A 249 GIS-NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHN--GKWDKS--------GELSQGRAYGVSLP-WN 316 (357)
T ss_dssp EEE-TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEE--------EECSSCCBSSEEEE-ET
T ss_pred EEE-CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCC--CceeeC--------CCCCCCcccceeEE-eC
Confidence 888 5999999997422 22346899999999 999999 57899999999886 89
Q ss_pred CEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeecc
Q 016774 276 GRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRA 327 (383)
Q Consensus 276 ~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 327 (383)
++|||+||.+..+...+++++|+++ +++|....+
T Consensus 317 ~~i~v~GG~~~~~~~~~~v~~l~~~------------------~~~~~~~~~ 350 (357)
T 2uvk_A 317 NSLLIIGGETAGGKAVTDSVLITVK------------------DNKVTVQNL 350 (357)
T ss_dssp TEEEEEEEECGGGCEEEEEEEEEC-------------------CCSCEEEC-
T ss_pred CEEEEEeeeCCCCCEeeeEEEEEEc------------------CcEeEeeec
Confidence 9999999998877778999999998 788887754
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.2e-32 Score=277.92 Aligned_cols=258 Identities=16% Similarity=0.191 Sum_probs=204.1
Q ss_pred hccccccceeeee-c--CCCCCCCCCCCcccceeee--CCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCC
Q 016774 15 VTQLESVSCRNIS-D--ADGDLVLPNPRASHSLNFV--SNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGI 89 (383)
Q Consensus 15 ~~~~~~~~W~~~~-~--~~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 89 (383)
.|++.+++|+.+. . .+.. |.+|.+|+++++ +++|||+||........+++|+|+...+ +|+++. .+
T Consensus 416 ~yd~~~~~W~~~~~~~p~~~~---p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~-----~W~~~~-~~ 486 (695)
T 2zwa_A 416 QLSIHYDKIDMKNIEVSSSEV---PVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR-----EWSMIK-SL 486 (695)
T ss_dssp EEEECSSCEEEEECCCCCSCC---CCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT-----EEEECC-CC
T ss_pred EEECCCCeEEEeccCCCCCCC---CccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC-----cEEECC-CC
Confidence 5788999999998 4 2334 899999999999 9999999998766667899999999655 999997 47
Q ss_pred CCCCcceeEEEE-CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEEC-C-cEEEE
Q 016774 90 PSGRFGHTCVVI-GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCID-N-RKMVI 166 (383)
Q Consensus 90 p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~-~-~~i~v 166 (383)
|.+|.+|+++++ +++|||+||..... ++++||+ .+++|+.+...+..|.+|.+|+++.++ + ++|||
T Consensus 487 p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~-------~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 487 SHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNV-------TEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp SBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEET-------TTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcccceEEEEcCCEEEEECCCCCCC----CEEEEEC-------CCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 899999999997 99999999986543 8999999 699999998877789999999977755 2 58999
Q ss_pred EcccCCCC-CcccceEEEeccCCcccCc------eEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCC--CccccEEE
Q 016774 167 HAGIGLYG-LRLGDTWVLELSENFCFGS------WQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGY--EVLNDVWF 237 (383)
Q Consensus 167 ~GG~~~~~-~~~~~~~~~d~~~~~~~~~------W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~--~~~~~v~~ 237 (383)
+||....+ ..++++++||+.++ + |+++.. ..+.+|.+|+++.+++++|||+||..... ...+++++
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~----~w~~~~~W~~~~~-~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~ 630 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAE----NATEPITVIKKLQ-HPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIIS 630 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTT----CSSCCEEEEEEEE-CGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEE
T ss_pred ECCcCCCCCeeeCcEEEEEccCC----ccccceEEEEcCC-CCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEE
Confidence 99986554 57899999999998 7 888873 12578999999999559999999985333 36789999
Q ss_pred EEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCC---CCCCCCcEEEEEcC
Q 016774 238 LDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDS---ARRRKDDFWVLDTK 300 (383)
Q Consensus 238 ~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~---~~~~~~~~~~~d~~ 300 (383)
||+.+ ++|+.++.+.... +..+..+.+|+++++.+++|||+||... -+...+++|.+|+.
T Consensus 631 yd~~t--~~W~~~~~p~~~~-~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~ 693 (695)
T 2zwa_A 631 LDPLS--ETLTSIPISRRIW-EDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAI 693 (695)
T ss_dssp EETTT--TEEEECCCCHHHH-HHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEEC
T ss_pred EECCC--CeEEEeecccccc-CCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEE
Confidence 99999 9999764111000 0012256788888744559999999642 24456799999986
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=6.6e-31 Score=264.69 Aligned_cols=287 Identities=10% Similarity=0.045 Sum_probs=212.5
Q ss_pred hhccccccceeeeecCCCCCCCCCCCcccc--ee-eeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCC
Q 016774 14 QVTQLESVSCRNISDADGDLVLPNPRASHS--LN-FVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIP 90 (383)
Q Consensus 14 ~~~~~~~~~W~~~~~~~~~~~~p~~r~~~~--~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p 90 (383)
..||+.+++|+.+... |.+|..++ ++ +.+++||++||... .++++||+..+ +|+++. .+|
T Consensus 222 ~~yd~~t~~w~~~~~~------~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~-----~W~~~~-~~~ 284 (656)
T 1k3i_A 222 SSWDPSTGIVSDRTVT------VTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSD-----SWIPGP-DMQ 284 (656)
T ss_dssp EEECTTTCCBCCCEEE------ECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGT-----EEEECC-CCS
T ss_pred EEEeCCCCcEEeCccc------CCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCC-----ceeECC-CCC
Confidence 5689999999998654 45565554 33 35889999999643 27899999554 999997 588
Q ss_pred CCCcceeEEEE-CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcc
Q 016774 91 SGRFGHTCVVI-GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAG 169 (383)
Q Consensus 91 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG 169 (383)
.+|..|+++++ +++|||+||........+++++||+ .+++|+.+...+..|.++..+.++...++++|++||
T Consensus 285 ~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~-------~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg 357 (656)
T 1k3i_A 285 VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP-------SSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGW 357 (656)
T ss_dssp SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET-------TTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEEC
T ss_pred ccccccceEEecCCeEEEEeCcccCCcccccceEeCC-------CCCcceeCCCccccccccccccceeecCCceEEEEC
Confidence 89999999999 8999999996555557889999999 689999985433223333233333334459999999
Q ss_pred cCCCC---CcccceEEEeccCCcccCceEEcc-cCCC----CCCCCCceEEEE--cCCEEEEEcccCC--CCCccc---c
Q 016774 170 IGLYG---LRLGDTWVLELSENFCFGSWQQLV-THPS----PPARSGHSLTRI--GGNRTVLFGGRGV--GYEVLN---D 234 (383)
Q Consensus 170 ~~~~~---~~~~~~~~~d~~~~~~~~~W~~~~-~~~~----p~~r~~~~~~~~--~~~~i~v~GG~~~--~~~~~~---~ 234 (383)
.+... ...++++.||+.++ .|.+.. .... +.++..++++.+ .+++||++||... .....+ .
T Consensus 358 ~~g~~~~~~~~~~v~~yd~~~~----~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~ 433 (656)
T 1k3i_A 358 KKGSVFQAGPSTAMNWYYTSGS----GDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHI 433 (656)
T ss_dssp GGGCEEECCSSSEEEEEECSTT----CEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEE
T ss_pred CCCcEEEecCccceeeeecCCc----ceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceE
Confidence 74221 24678999999998 887644 1111 223455666542 3699999999742 223344 7
Q ss_pred EEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCC-----CCCCCcEEEEEcCCCccccccc
Q 016774 235 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSA-----RRRKDDFWVLDTKAIPFTSVQQ 309 (383)
Q Consensus 235 v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~-----~~~~~~~~~~d~~~~~~~~~~~ 309 (383)
+++||+.+ .+|.++. .+.+|.+|..|+++++.+++|||+||.+.. ....+++++||++
T Consensus 434 v~~yd~~~--~~W~~~~------~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~--------- 496 (656)
T 1k3i_A 434 ITLGEPGT--SPNTVFA------SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPE--------- 496 (656)
T ss_dssp EECCSTTS--CCEEEEC------TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGG---------
T ss_pred EEcCCCCC--CCeeEEc------cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCC---------
Confidence 89999999 9999982 357899999999887559999999997632 2446889999987
Q ss_pred ccccccccccccceeeccCCCCCCCccceeeeecCCCcEEEEEcCccC
Q 016774 310 SMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVD 357 (383)
Q Consensus 310 ~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~l~v~GG~~~ 357 (383)
+++|+.+.. +|.+|.+|+++++..+++|||+||...
T Consensus 497 ---------t~~W~~~~~---~~~~R~~hs~a~ll~dg~v~v~GG~~~ 532 (656)
T 1k3i_A 497 ---------QDTFYKQNP---NSIVRVYHSISLLLPDGRVFNGGGGLC 532 (656)
T ss_dssp ---------GTEEEECCC---CSSCCCTTEEEEECTTSCEEEEECCCC
T ss_pred ---------CCceeecCC---CCCccccccHhhcCCCcEEEecCCCCC
Confidence 789998754 889999999887766789999999743
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=4.2e-29 Score=251.52 Aligned_cols=280 Identities=14% Similarity=0.060 Sum_probs=200.0
Q ss_pred hhccccccceeeeecCCCCCCCCCCCcccceeee--CCEEEEEccccCCC-----CCCCceEEEEeccCcccccceEEcC
Q 016774 14 QVTQLESVSCRNISDADGDLVLPNPRASHSLNFV--SNCLVLFGGGCEGG-----RHLDDTWVAYVGNDFQGMLKWQKVN 86 (383)
Q Consensus 14 ~~~~~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~-----~~~~~~~~~~~~~~~~~~~~W~~~~ 86 (383)
..|++..++|+.+. |.||..++++++ +++||++||..... ...+++++||+..+ +|+++.
T Consensus 169 ~~~dp~~~~W~~~~--------~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~-----~w~~~~ 235 (656)
T 1k3i_A 169 TAPQPGLGRWGPTI--------DLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG-----IVSDRT 235 (656)
T ss_dssp CCCCTTSCEEEEEE--------ECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC-----CBCCCE
T ss_pred ccCCCCCCeeeeec--------cCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCC-----cEEeCc
Confidence 34678899999886 345666666666 88999999964421 12346788888554 999886
Q ss_pred CCCCCCCccee--EEE-ECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcE
Q 016774 87 SGIPSGRFGHT--CVV-IGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRK 163 (383)
Q Consensus 87 ~~~p~~r~~~~--~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~ 163 (383)
. +|.+|..|+ ++. .+++||++||.... ++++||+ .+++|+++.. +|.+|..|+++.+.+++
T Consensus 236 ~-~~~~~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~-------~t~~W~~~~~---~~~~R~~~s~~~~~dg~ 299 (656)
T 1k3i_A 236 V-TVTKHDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDS-------SSDSWIPGPD---MQVARGYQSSATMSDGR 299 (656)
T ss_dssp E-EECSCCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEG-------GGTEEEECCC---CSSCCSSCEEEECTTSC
T ss_pred c-cCCCCCCccccccCCCCCCEEEeCCCCCC-----ceEEecC-------cCCceeECCC---CCccccccceEEecCCe
Confidence 3 555665554 343 57889999997542 6999999 6999999864 78999999999985569
Q ss_pred EEEEcccCCCCCcccceEEEeccCCcccCceEEccc---CCCCCCCCCceEEEEcCCEEEEEcccCCCC---CccccEEE
Q 016774 164 MVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVT---HPSPPARSGHSLTRIGGNRTVLFGGRGVGY---EVLNDVWF 237 (383)
Q Consensus 164 i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~---~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~---~~~~~v~~ 237 (383)
||++||.......++++++||+.++ +|+.++. .+++..|.. +++.. ++++|++||.+... ...++++.
T Consensus 300 iyv~GG~~~~~~~~~~~e~yd~~t~----~W~~~~~~~~~p~~~~~~~-~~~~~-~~~iyv~Gg~~g~~~~~~~~~~v~~ 373 (656)
T 1k3i_A 300 VFTIGGSWSGGVFEKNGEVYSPSSK----TWTSLPNAKVNPMLTADKQ-GLYRS-DNHAWLFGWKKGSVFQAGPSTAMNW 373 (656)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTT----EEEEETTSCSGGGCCCCTT-GGGTT-TCSCCEEECGGGCEEECCSSSEEEE
T ss_pred EEEEeCcccCCcccccceEeCCCCC----cceeCCCcccccccccccc-ceeec-CCceEEEECCCCcEEEecCccceee
Confidence 9999996444457889999999999 9999851 234444432 33334 68999999984221 23568999
Q ss_pred EEcccCccceEEecccccCCCCCCC------CCceeeEEEEE--cCCEEEEEcCcCCC--CCCCC---cEEEEEcCCCcc
Q 016774 238 LDVYEGFFKWVQIPYELQNIPAGFS------LPRVGHSATLI--LGGRVLIYGGEDSA--RRRKD---DFWVLDTKAIPF 304 (383)
Q Consensus 238 ~~~~~~~~~W~~i~~~~~~~~~~~p------~~r~~~~~~~~--~~~~l~i~GG~~~~--~~~~~---~~~~~d~~~~~~ 304 (383)
||+.+ .+|.... +..+ .++..++++++ .+++||++||.... ....+ ++++||+.
T Consensus 374 yd~~~--~~w~~~~-------~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~---- 440 (656)
T 1k3i_A 374 YYTSG--SGDVKSA-------GKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG---- 440 (656)
T ss_dssp EECST--TCEEEEE-------EECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTT----
T ss_pred eecCC--cceeecC-------CccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCC----
Confidence 99999 8887642 2222 23344555532 58999999997532 22244 56666666
Q ss_pred cccccccccccccccccceeeccCCCCCCCccceeeeecCCCcEEEEEcCccC
Q 016774 305 TSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVD 357 (383)
Q Consensus 305 ~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~l~v~GG~~~ 357 (383)
+.+|..+. .+.+|.+|..|+++++. +++|||+||...
T Consensus 441 --------------~~~W~~~~-~~~mp~~R~~~~~~~l~-~g~i~v~GG~~~ 477 (656)
T 1k3i_A 441 --------------TSPNTVFA-SNGLYFARTFHTSVVLP-DGSTFITGGQRR 477 (656)
T ss_dssp --------------SCCEEEEC-TTCCSSCCBSCEEEECT-TSCEEEECCBSB
T ss_pred --------------CCCeeEEc-cCCCCCCcccCCeEECC-CCCEEEECCccc
Confidence 78898876 24589999999987765 569999999854
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.15 E-value=0.13 Score=46.15 Aligned_cols=201 Identities=8% Similarity=-0.019 Sum_probs=105.0
Q ss_pred CCcccceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccce-EEcCCCCCCCCcceeEEE-ECCEEEEEcCccCCC
Q 016774 38 PRASHSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKW-QKVNSGIPSGRFGHTCVV-IGDCLVLFGGINDRG 115 (383)
Q Consensus 38 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W-~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~ 115 (383)
....+.++..++++|+.... .+.+.++|..+. +- ..++. . ..-+.++. .++++|+....
T Consensus 43 g~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~-----~~~~~i~~-~---~~p~~i~~~~~g~lyv~~~~---- 103 (328)
T 3dsm_A 43 GDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTF-----KEVGRITG-F---TSPRYIHFLSDEKAYVTQIW---- 103 (328)
T ss_dssp BSCEEEEEEETTEEEEEEGG------GTEEEEEETTTC-----CEEEEEEC-C---SSEEEEEEEETTEEEEEEBS----
T ss_pred CccceEEEEECCEEEEEEcC------CCEEEEEECccc-----EEEEEcCC-C---CCCcEEEEeCCCeEEEEECC----
Confidence 33445566778999998752 346777777433 22 22221 1 22234444 57789988642
Q ss_pred CCccceeeeecccccCCcccccEEE-ccCCCCCC-CccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCc
Q 016774 116 NRHNDTWIGQIACHENLGITLSWRL-LDVGSIAP-PARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGS 193 (383)
Q Consensus 116 ~~~~~~~~~d~~~~~~~~~~~~W~~-~~~~~~~p-~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~ 193 (383)
.+.+.++|+ ++.+-.. +.. +... ....-+.++. .++++|+..- . ..+.+.++|+.++ +
T Consensus 104 --~~~v~~iD~-------~t~~~~~~i~~-g~~~~~~~~p~~i~~-~~~~lyv~~~-~----~~~~v~viD~~t~----~ 163 (328)
T 3dsm_A 104 --DYRIFIINP-------KTYEITGYIEC-PDMDMESGSTEQMVQ-YGKYVYVNCW-S----YQNRILKIDTETD----K 163 (328)
T ss_dssp --CSEEEEEET-------TTTEEEEEEEC-TTCCTTTCBCCCEEE-ETTEEEEEEC-T----TCCEEEEEETTTT----E
T ss_pred --CCeEEEEEC-------CCCeEEEEEEc-CCccccCCCcceEEE-ECCEEEEEcC-C----CCCEEEEEECCCC----e
Confidence 246889998 4554432 222 2100 0001223333 5568999742 0 1356999999987 4
Q ss_pred eEEc-ccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCc----cccEEEEEcccCccceEEecccccCCCCCCCCCceee
Q 016774 194 WQQL-VTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEV----LNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGH 268 (383)
Q Consensus 194 W~~~-~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~----~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~ 268 (383)
.... +.+..| +.+....++++|+.......... .+.|+++|+.+ .+..+.- ..+....-.
T Consensus 164 ~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t--~~v~~~~--------~~~~g~~p~ 228 (328)
T 3dsm_A 164 VVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET--FTVEKQF--------KFKLGDWPS 228 (328)
T ss_dssp EEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT--TEEEEEE--------ECCTTCCCE
T ss_pred EEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC--CeEEEEE--------ecCCCCCce
Confidence 4332 222222 23344445787776533211111 25799999987 6544321 112111112
Q ss_pred EEEEEc-CCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 269 SATLIL-GGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 269 ~~~~~~-~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.++... ++.||+..+ .++.+|+++
T Consensus 229 ~la~~~d~~~lyv~~~---------~v~~~d~~t 253 (328)
T 3dsm_A 229 EVQLNGTRDTLYWINN---------DIWRMPVEA 253 (328)
T ss_dssp EEEECTTSCEEEEESS---------SEEEEETTC
T ss_pred eEEEecCCCEEEEEcc---------EEEEEECCC
Confidence 233322 567888653 689999874
No 20
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.05 E-value=0.11 Score=44.45 Aligned_cols=196 Identities=13% Similarity=0.034 Sum_probs=110.2
Q ss_pred cceeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCC
Q 016774 94 FGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLY 173 (383)
Q Consensus 94 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~ 173 (383)
+-+.+...++.+|+-.|..+ .+.+..+|+ ++.+-..-.. .|....+...+..++ ++|+....
T Consensus 22 ftqGL~~~~~~LyestG~~g----~S~v~~vD~-------~tgkv~~~~~---l~~~~fgeGi~~~~~-~ly~ltw~--- 83 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETG----RSSVRKVDL-------ETGRILQRAE---VPPPYFGAGIVAWRD-RLIQLTWR--- 83 (243)
T ss_dssp CEEEEEEETTEEEEEECCTT----SCEEEEEET-------TTCCEEEEEE---CCTTCCEEEEEEETT-EEEEEESS---
T ss_pred ccccEEEECCEEEEECCCCC----CceEEEEEC-------CCCCEEEEEe---CCCCcceeEEEEeCC-EEEEEEee---
Confidence 44577778899999998654 245888999 4665544322 233334445555555 99998653
Q ss_pred CCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccce-EEecc
Q 016774 174 GLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKW-VQIPY 252 (383)
Q Consensus 174 ~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W-~~i~~ 252 (383)
.+.+++||.++- +.+. ..+.+..+..++.. ++.+|+.-|. +.++++|+++ .+- ..++
T Consensus 84 ---~~~v~v~D~~tl------~~~~--ti~~~~~Gwglt~d-g~~L~vSdgs-------~~l~~iDp~t--~~~~~~I~- 141 (243)
T 3mbr_X 84 ---NHEGFVYDLATL------TPRA--RFRYPGEGWALTSD-DSHLYMSDGT-------AVIRKLDPDT--LQQVGSIK- 141 (243)
T ss_dssp ---SSEEEEEETTTT------EEEE--EEECSSCCCEEEEC-SSCEEEECSS-------SEEEEECTTT--CCEEEEEE-
T ss_pred ---CCEEEEEECCcC------cEEE--EEeCCCCceEEeeC-CCEEEEECCC-------CeEEEEeCCC--CeEEEEEE-
Confidence 367999999875 4444 11222345555544 5778888663 2599999987 443 2232
Q ss_pred cccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccC-CC-
Q 016774 253 ELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAE-GY- 330 (383)
Q Consensus 253 ~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~-~~- 330 (383)
.+..+.+.....-....+++||+---. .+++.++|+.+... -.|-.+... ..
T Consensus 142 -----V~~~g~~~~~lNeLe~~~G~lyanvw~------s~~I~vIDp~tG~V---------------~~~idl~~l~~~~ 195 (243)
T 3mbr_X 142 -----VTAGGRPLDNLNELEWVNGELLANVWL------TSRIARIDPASGKV---------------VAWIDLQALVPDA 195 (243)
T ss_dssp -----CEETTEECCCEEEEEEETTEEEEEETT------TTEEEEECTTTCBE---------------EEEEECGGGSTTT
T ss_pred -----EccCCcccccceeeEEeCCEEEEEECC------CCeEEEEECCCCCE---------------EEEEECCcCcccc
Confidence 111122211111112257787744322 45789999885431 122222210 00
Q ss_pred ----CCCCccceeeeecCCCcEEEEEcCc
Q 016774 331 ----KPNCRSFHRACPDYSGRYLYVFGGM 355 (383)
Q Consensus 331 ----~p~~r~~~~~~~~~~~~~l~v~GG~ 355 (383)
.+..-.--+.+....++.+||.|=.
T Consensus 196 ~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 196 DALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp TSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred ccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 1122233466677778999999965
No 21
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.45 E-value=0.31 Score=42.16 Aligned_cols=194 Identities=13% Similarity=0.044 Sum_probs=105.6
Q ss_pred eeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCC
Q 016774 96 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGL 175 (383)
Q Consensus 96 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~ 175 (383)
+.+...++.+|+-.|..+ .+.+.++|+ ++.+-..-.. .+...++...+..++ ++|+....
T Consensus 46 qGL~~~~~~LyestG~~g----~S~v~~vD~-------~Tgkv~~~~~---l~~~~FgeGit~~g~-~ly~ltw~----- 105 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----RSSIRKVDI-------ESGKTLQQIE---LGKRYFGEGISDWKD-KIVGLTWK----- 105 (262)
T ss_dssp EEEEEETTEEEEEEEETT----EEEEEEECT-------TTCCEEEEEE---CCTTCCEEEEEEETT-EEEEEESS-----
T ss_pred ceEEEECCEEEEECCCCC----CceEEEEEC-------CCCcEEEEEe---cCCccceeEEEEeCC-EEEEEEee-----
Confidence 555666888999998653 245888998 4655543322 222223344455555 99998653
Q ss_pred cccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccce-EEecccc
Q 016774 176 RLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKW-VQIPYEL 254 (383)
Q Consensus 176 ~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W-~~i~~~~ 254 (383)
.+.+++||+++. +.+. ..+.+-.+..++.. ++.+|+.-|. +.++++|+++ .+- ..++.
T Consensus 106 -~~~v~v~D~~t~------~~~~--ti~~~~eG~glt~d-g~~L~~SdGs-------~~i~~iDp~T--~~v~~~I~V-- 164 (262)
T 3nol_A 106 -NGLGFVWNIRNL------RQVR--SFNYDGEGWGLTHN-DQYLIMSDGT-------PVLRFLDPES--LTPVRTITV-- 164 (262)
T ss_dssp -SSEEEEEETTTC------CEEE--EEECSSCCCCEEEC-SSCEEECCSS-------SEEEEECTTT--CSEEEEEEC--
T ss_pred -CCEEEEEECccC------cEEE--EEECCCCceEEecC-CCEEEEECCC-------CeEEEEcCCC--CeEEEEEEe--
Confidence 367999999875 3333 11112244445544 4778877653 3599999987 443 23320
Q ss_pred cCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccC-C----
Q 016774 255 QNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAE-G---- 329 (383)
Q Consensus 255 ~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~-~---- 329 (383)
.....|..... -+.. .+++||+-- . ..+++.++|+.+... -.|..+... +
T Consensus 165 --~~~g~~~~~lN-ELe~-~~G~lyan~-w-----~~~~I~vIDp~tG~V---------------~~~Id~~~L~~~~~~ 219 (262)
T 3nol_A 165 --TAHGEELPELN-ELEW-VDGEIFANV-W-----QTNKIVRIDPETGKV---------------TGIIDLNGILAEAGP 219 (262)
T ss_dssp --EETTEECCCEE-EEEE-ETTEEEEEE-T-----TSSEEEEECTTTCBE---------------EEEEECTTGGGGSCS
T ss_pred --ccCCccccccc-eeEE-ECCEEEEEE-c-----cCCeEEEEECCCCcE---------------EEEEECCcCcccccc
Confidence 00111212111 1222 577877532 1 145789999885331 122222100 0
Q ss_pred CCCCCccceeeeecCCCcEEEEEcCc
Q 016774 330 YKPNCRSFHRACPDYSGRYLYVFGGM 355 (383)
Q Consensus 330 ~~p~~r~~~~~~~~~~~~~l~v~GG~ 355 (383)
..+..-.-.+.+....++.+||.|-.
T Consensus 220 ~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 220 LPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp CCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred ccCcCCceEEEEEcCCCCEEEEECCC
Confidence 01112233577777888999999965
No 22
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.32 E-value=0.47 Score=41.20 Aligned_cols=197 Identities=12% Similarity=0.055 Sum_probs=104.2
Q ss_pred eeEEEEC-CEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCC
Q 016774 96 HTCVVIG-DCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYG 174 (383)
Q Consensus 96 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~ 174 (383)
+.+...+ +.+|+..|... .+.+..+|+ ++.+-..-.. .+....+...+..+ +.+|+...
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~-------~tg~v~~~i~---l~~~~fgeGi~~~g-~~lyv~t~----- 83 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVAL-------QTGKVENIHK---MDDSYFGEGLTLLN-EKLYQVVW----- 83 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEET-------TTCCEEEEEE---CCTTCCEEEEEEET-TEEEEEET-----
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEEC-------CCCCEEEEEe---cCCCcceEEEEEeC-CEEEEEEe-----
Confidence 5666666 67999877432 246889999 4665443222 11222233444444 48999854
Q ss_pred CcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccce-EEeccc
Q 016774 175 LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKW-VQIPYE 253 (383)
Q Consensus 175 ~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W-~~i~~~ 253 (383)
..+.+++||+.+. +.+..-+.+. ..+..++. .++++|+.-|. +.++++|+++ .+- ..++.
T Consensus 84 -~~~~v~viD~~t~------~v~~~i~~g~-~~g~glt~-Dg~~l~vs~gs-------~~l~viD~~t--~~v~~~I~V- 144 (266)
T 2iwa_A 84 -LKNIGFIYDRRTL------SNIKNFTHQM-KDGWGLAT-DGKILYGSDGT-------SILYEIDPHT--FKLIKKHNV- 144 (266)
T ss_dssp -TCSEEEEEETTTT------EEEEEEECCS-SSCCEEEE-CSSSEEEECSS-------SEEEEECTTT--CCEEEEEEC-
T ss_pred -cCCEEEEEECCCC------cEEEEEECCC-CCeEEEEE-CCCEEEEECCC-------CeEEEEECCC--CcEEEEEEE-
Confidence 2356999999875 3333111111 12233333 35778887542 3699999987 442 23320
Q ss_pred ccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccC-----
Q 016774 254 LQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAE----- 328 (383)
Q Consensus 254 ~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~----- 328 (383)
.....|..+.. .+.. .++++|+--.. .+++.++|+.+... -.|..+...
T Consensus 145 ---g~~~~p~~~~n-ele~-~dg~lyvn~~~------~~~V~vID~~tg~V---------------~~~I~~~g~~~~~~ 198 (266)
T 2iwa_A 145 ---KYNGHRVIRLN-ELEY-INGEVWANIWQ------TDCIARISAKDGTL---------------LGWILLPNLRKKLI 198 (266)
T ss_dssp ---EETTEECCCEE-EEEE-ETTEEEEEETT------SSEEEEEETTTCCE---------------EEEEECHHHHHHHH
T ss_pred ---CCCCcccccce-eEEE-ECCEEEEecCC------CCeEEEEECCCCcE---------------EEEEECCCcccccc
Confidence 00111222222 2222 47788765322 45799999985321 122222100
Q ss_pred -CCCCCCccceeeeecCCCcEEEEEcCccC
Q 016774 329 -GYKPNCRSFHRACPDYSGRYLYVFGGMVD 357 (383)
Q Consensus 329 -~~~p~~r~~~~~~~~~~~~~l~v~GG~~~ 357 (383)
...+..-.-.+.+....++.+||.|+..+
T Consensus 199 ~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 199 DEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp HTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred cccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 00111112256667777889999998743
No 23
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.99 E-value=0.52 Score=40.80 Aligned_cols=191 Identities=9% Similarity=-0.065 Sum_probs=102.6
Q ss_pred eeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCC
Q 016774 96 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGL 175 (383)
Q Consensus 96 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~ 175 (383)
+.+...++.||+..|... .+.++|+ ++.+-..-.. +...++...+.. ++++|+....
T Consensus 58 qGL~~~~~~Ly~stG~~g------~v~~iD~-------~Tgkv~~~~l----~~~~FgeGit~~-g~~Ly~ltw~----- 114 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG------TLRQLSL-------ESAQPVWMER----LGNIFAEGLASD-GERLYQLTWT----- 114 (268)
T ss_dssp EEEEEETTEEEEEETTTT------EEEECCS-------SCSSCSEEEE----CTTCCEEEEEEC-SSCEEEEESS-----
T ss_pred ceEEEECCEEEEEcCCCC------EEEEEEC-------CCCcEEeEEC----CCCcceeEEEEe-CCEEEEEEcc-----
Confidence 567777889999998643 2778888 3443322111 122223334444 4499998553
Q ss_pred cccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceE-Eecccc
Q 016774 176 RLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWV-QIPYEL 254 (383)
Q Consensus 176 ~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~-~i~~~~ 254 (383)
.+.+++||+++. +.+. ..+.+-.+..++.. ++.+|+.-|.+ .++++|+++ .+-. .++
T Consensus 115 -~~~v~V~D~~Tl------~~~~--ti~~~~eGwGLt~D-g~~L~vSdGs~-------~l~~iDp~T--~~v~~~I~--- 172 (268)
T 3nok_A 115 -EGLLFTWSGMPP------QRER--TTRYSGEGWGLCYW-NGKLVRSDGGT-------MLTFHEPDG--FALVGAVQ--- 172 (268)
T ss_dssp -SCEEEEEETTTT------EEEE--EEECSSCCCCEEEE-TTEEEEECSSS-------EEEEECTTT--CCEEEEEE---
T ss_pred -CCEEEEEECCcC------cEEE--EEeCCCceeEEecC-CCEEEEECCCC-------EEEEEcCCC--CeEEEEEE---
Confidence 356999999875 4343 11112234455555 58899887632 699999987 4432 231
Q ss_pred cCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccC----C-
Q 016774 255 QNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAE----G- 329 (383)
Q Consensus 255 ~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~----~- 329 (383)
-...+.+...-.-....+++||+-- . ..+++.++|+++... -.|-.+... .
T Consensus 173 ---V~~~g~~v~~lNeLe~~dG~lyanv-w-----~s~~I~vIDp~TG~V---------------~~~Idl~~L~~~~~~ 228 (268)
T 3nok_A 173 ---VKLRGQPVELINELECANGVIYANI-W-----HSSDVLEIDPATGTV---------------VGVIDASALTRAVAG 228 (268)
T ss_dssp ---CEETTEECCCEEEEEEETTEEEEEE-T-----TCSEEEEECTTTCBE---------------EEEEECHHHHHHHTT
T ss_pred ---eCCCCcccccccccEEeCCEEEEEE-C-----CCCeEEEEeCCCCcE---------------EEEEECCCCcccccc
Confidence 0111111111111122577877422 1 145789999885431 123222210 0
Q ss_pred -CCCCCccceeeeecCCCcEEEEEcCc
Q 016774 330 -YKPNCRSFHRACPDYSGRYLYVFGGM 355 (383)
Q Consensus 330 -~~p~~r~~~~~~~~~~~~~l~v~GG~ 355 (383)
..+..-.--+.+....++.|||.|=.
T Consensus 229 ~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 229 QVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp TCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred cccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 01111223466667778899999965
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.98 E-value=0.81 Score=40.79 Aligned_cols=165 Identities=8% Similarity=-0.038 Sum_probs=89.5
Q ss_pred CCCCcceeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccE-EEccCCCCCCCccccceeEEECCcEEEEEc
Q 016774 90 PSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSW-RLLDVGSIAPPARGAHAACCIDNRKMVIHA 168 (383)
Q Consensus 90 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W-~~~~~~~~~p~~r~~~~~~~~~~~~i~v~G 168 (383)
+.....+.++..++++|+.... .+.+.++|+ .+.+- .++.. ...|+ ..+...++++|+..
T Consensus 41 ~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~-------~t~~~~~~i~~---~~~p~---~i~~~~~g~lyv~~ 101 (328)
T 3dsm_A 41 KLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDI-------NTFKEVGRITG---FTSPR---YIHFLSDEKAYVTQ 101 (328)
T ss_dssp CCBSCEEEEEEETTEEEEEEGG------GTEEEEEET-------TTCCEEEEEEC---CSSEE---EEEEEETTEEEEEE
T ss_pred ccCccceEEEEECCEEEEEEcC------CCEEEEEEC-------cccEEEEEcCC---CCCCc---EEEEeCCCeEEEEE
Confidence 3445556777889999998753 235888998 45554 23321 22332 33442445899976
Q ss_pred ccCCCCCcccceEEEeccCCcccCceE-EcccCCCC-CCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccc
Q 016774 169 GIGLYGLRLGDTWVLELSENFCFGSWQ-QLVTHPSP-PARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFK 246 (383)
Q Consensus 169 G~~~~~~~~~~~~~~d~~~~~~~~~W~-~~~~~~~p-~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~ 246 (383)
.. .+.+.++|+.+. +-. .++.+... ....-+.++. .++++|+..-. ..+.|.++|+++ .+
T Consensus 102 ~~------~~~v~~iD~~t~----~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~-----~~~~v~viD~~t--~~ 163 (328)
T 3dsm_A 102 IW------DYRIFIINPKTY----EITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWS-----YQNRILKIDTET--DK 163 (328)
T ss_dssp BS------CSEEEEEETTTT----EEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECT-----TCCEEEEEETTT--TE
T ss_pred CC------CCeEEEEECCCC----eEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCC-----CCCEEEEEECCC--Ce
Confidence 42 256899999886 433 22221200 0001123334 46889888421 123699999988 55
Q ss_pred eEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCC----CCcEEEEEcCC
Q 016774 247 WVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRR----KDDFWVLDTKA 301 (383)
Q Consensus 247 W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~----~~~~~~~d~~~ 301 (383)
....- ..+..| +.+....++++|+..-....... .+.++++|+.+
T Consensus 164 ~~~~i-----~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 164 VVDEL-----TIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp EEEEE-----ECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred EEEEE-----EcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC
Confidence 43321 112222 12333356888877543211111 25799999873
No 25
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.21 E-value=5.2 Score=40.27 Aligned_cols=138 Identities=8% Similarity=0.001 Sum_probs=72.8
Q ss_pred ceeeeecccccCCcccccEEEccCCCCCCC-ccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcc
Q 016774 120 DTWIGQIACHENLGITLSWRLLDVGSIAPP-ARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLV 198 (383)
Q Consensus 120 ~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~-~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~ 198 (383)
.+++||. .+.+|.........+. ...-.+.+...++.+++.. . . .-+++||++++ +++...
T Consensus 470 Gl~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~-----~Gl~~~~~~~~----~~~~~~ 531 (781)
T 3v9f_A 470 GVFVIDL-------ASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT-F-G-----GGVGIYTPDMQ----LVRKFN 531 (781)
T ss_dssp EEEEEES-------SSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE-S-S-----SCEEEECTTCC----EEEEEC
T ss_pred ceEEEeC-------CCCeEEecccCcccccccceeEEEEEcCCCCEEEEE-c-C-----CCEEEEeCCCC----eEEEcc
Confidence 4888988 4666665542110111 1112233333455677743 1 1 23899999887 777765
Q ss_pred c-CCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccE-EEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCC
Q 016774 199 T-HPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDV-WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGG 276 (383)
Q Consensus 199 ~-~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v-~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~ 276 (383)
. ..+|.. ...++....++.|++.... .+ ++||..+ .+++... ....+|.... .+++...++
T Consensus 532 ~~~~l~~~-~i~~i~~d~~g~lWi~T~~--------Glv~~~d~~~--~~~~~~~-----~~~gl~~~~i-~~i~~d~~g 594 (781)
T 3v9f_A 532 QYEGFCSN-TINQIYRSSKGQMWLATGE--------GLVCFPSARN--FDYQVFQ-----RKEGLPNTHI-RAISEDKNG 594 (781)
T ss_dssp TTTTCSCS-CEEEEEECTTSCEEEEETT--------EEEEESCTTT--CCCEEEC-----GGGTCSCCCC-CEEEECSSS
T ss_pred CCCCCCCC-eeEEEEECCCCCEEEEECC--------CceEEECCCC--CcEEEcc-----ccCCCCCceE-EEEEECCCC
Confidence 2 122222 1223333344667764321 36 8899888 7787764 2233444433 334432467
Q ss_pred EEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 277 RVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 277 ~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
.|++.+ .. .+.+||++
T Consensus 595 ~lW~~t-~~-------Gl~~~~~~ 610 (781)
T 3v9f_A 595 NIWAST-NT-------GISCYITS 610 (781)
T ss_dssp CEEEEC-SS-------CEEEEETT
T ss_pred CEEEEc-CC-------ceEEEECC
Confidence 777764 22 37888887
No 26
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=93.46 E-value=4.5 Score=36.94 Aligned_cols=109 Identities=9% Similarity=-0.063 Sum_probs=52.2
Q ss_pred CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCC--cccc
Q 016774 102 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGL--RLGD 179 (383)
Q Consensus 102 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~--~~~~ 179 (383)
++.+|+.++.. ..+.++|+ .+.+...... .......++...++..+++++...... .-..
T Consensus 223 ~~~l~~~~~~~------~~i~~~d~-------~~~~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~ 284 (433)
T 3bws_A 223 RDLVYCSNWIS------EDISVIDR-------KTKLEIRKTD-----KIGLPRGLLLSKDGKELYIAQFSASNQESGGGR 284 (433)
T ss_dssp TTEEEEEETTT------TEEEEEET-------TTTEEEEECC-----CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEE
T ss_pred CCEEEEEecCC------CcEEEEEC-------CCCcEEEEec-----CCCCceEEEEcCCCCEEEEEECCCCccccCCCe
Confidence 34577766532 25888998 3444333221 111123334444444555554322211 1346
Q ss_pred eEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCC-EEEEEcccCCCCCccccEEEEEccc
Q 016774 180 TWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGN-RTVLFGGRGVGYEVLNDVWFLDVYE 242 (383)
Q Consensus 180 ~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~v~~~~~~~ 242 (383)
++++|+.+. +-.... ..+. ....++...++ .+++.++.+ ..+.+||+.+
T Consensus 285 i~~~d~~~~----~~~~~~--~~~~--~~~~~~~~~~g~~l~~~~~~~------~~v~v~d~~~ 334 (433)
T 3bws_A 285 LGIYSMDKE----KLIDTI--GPPG--NKRHIVSGNTENKIYVSDMCC------SKIEVYDLKE 334 (433)
T ss_dssp EEEEETTTT----EEEEEE--EEEE--CEEEEEECSSTTEEEEEETTT------TEEEEEETTT
T ss_pred EEEEECCCC----cEEeec--cCCC--CcceEEECCCCCEEEEEecCC------CEEEEEECCC
Confidence 889999876 332222 1111 11122222233 577765543 2589999886
No 27
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.09 E-value=4.1 Score=36.55 Aligned_cols=142 Identities=9% Similarity=0.053 Sum_probs=70.0
Q ss_pred EEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCc-EEEEEcccCCCCCcccceEE
Q 016774 104 CLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNR-KMVIHAGIGLYGLRLGDTWV 182 (383)
Q Consensus 104 ~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~ 182 (383)
.+|+.|+.+ +.+.++|+ .+.+-....... ....+++...++ .+|+.++.+ ..+.+
T Consensus 3 ~l~vs~~~d------~~v~v~d~-------~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~d------~~i~v 58 (391)
T 1l0q_A 3 FAYIANSES------DNISVIDV-------TSNKVTATIPVG-----SNPMGAVISPDGTKVYVANAHS------NDVSI 58 (391)
T ss_dssp EEEEEETTT------TEEEEEET-------TTTEEEEEEECS-----SSEEEEEECTTSSEEEEEEGGG------TEEEE
T ss_pred EEEEEcCCC------CEEEEEEC-------CCCeEEEEeecC-----CCcceEEECCCCCEEEEECCCC------CeEEE
Confidence 467777643 25888888 344333221111 112334444343 566766532 46899
Q ss_pred EeccCCcccCceEEcccCCCCCCCCCceEEEEcCCE-EEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCC
Q 016774 183 LELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNR-TVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGF 261 (383)
Q Consensus 183 ~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~ 261 (383)
+|+.++ +....- .... .-.++....+++ |++.+..+ ..|+++|+.+ .+-.... . .
T Consensus 59 ~d~~~~----~~~~~~--~~~~--~v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~--~~~~~~~-------~-~ 114 (391)
T 1l0q_A 59 IDTATN----NVIATV--PAGS--SPQGVAVSPDGKQVYVTNMAS------STLSVIDTTS--NTVAGTV-------K-T 114 (391)
T ss_dssp EETTTT----EEEEEE--ECSS--SEEEEEECTTSSEEEEEETTT------TEEEEEETTT--TEEEEEE-------E-C
T ss_pred EECCCC----eEEEEE--ECCC--CccceEECCCCCEEEEEECCC------CEEEEEECCC--CeEEEEE-------e-C
Confidence 999876 433322 1111 222333333344 44444331 3599999987 5443331 0 0
Q ss_pred CCCceeeEEEEEcCC-EEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 262 SLPRVGHSATLILGG-RVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 262 p~~r~~~~~~~~~~~-~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
. ..-.++....++ .+++.++.+ ..++++|+.+
T Consensus 115 ~--~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~ 147 (391)
T 1l0q_A 115 G--KSPLGLALSPDGKKLYVTNNGD------KTVSVINTVT 147 (391)
T ss_dssp S--SSEEEEEECTTSSEEEEEETTT------TEEEEEETTT
T ss_pred C--CCcceEEECCCCCEEEEEeCCC------CEEEEEECCC
Confidence 1 111233322344 466776543 3588999873
No 28
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=92.84 E-value=5.5 Score=36.29 Aligned_cols=156 Identities=8% Similarity=-0.078 Sum_probs=74.5
Q ss_pred CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCcc-ccceeEEECCcEEEEEcccCCCCCcccce
Q 016774 102 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPAR-GAHAACCIDNRKMVIHAGIGLYGLRLGDT 180 (383)
Q Consensus 102 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r-~~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 180 (383)
++++++.++.. ..+.++|+ .+.+.............. .-.+++...++.+++.++. -..+
T Consensus 133 ~~~~~~~~~~~------~~i~~~d~-------~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~------d~~v 193 (433)
T 3bws_A 133 NTRLAIPLLED------EGMDVLDI-------NSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ------ANAV 193 (433)
T ss_dssp SSEEEEEBTTS------SSEEEEET-------TTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG------GTEE
T ss_pred CCeEEEEeCCC------CeEEEEEC-------CCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC------CCEE
Confidence 56677777643 24888998 355544432210000000 1112233345578777764 2458
Q ss_pred EEEeccCCcccCceEEcccCCCCCCCCCceEEEEcC-CEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCC
Q 016774 181 WVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGG-NRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPA 259 (383)
Q Consensus 181 ~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~ 259 (383)
.++|+++. +....-. .......++....+ +.+|+.++.+ ..|.++|+.+ .+.....
T Consensus 194 ~~~d~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~------~~i~~~d~~~--~~~~~~~-------- 250 (433)
T 3bws_A 194 HVFDLKTL----AYKATVD---LTGKWSKILLYDPIRDLVYCSNWIS------EDISVIDRKT--KLEIRKT-------- 250 (433)
T ss_dssp EEEETTTC----CEEEEEE---CSSSSEEEEEEETTTTEEEEEETTT------TEEEEEETTT--TEEEEEC--------
T ss_pred EEEECCCc----eEEEEEc---CCCCCeeEEEEcCCCCEEEEEecCC------CcEEEEECCC--CcEEEEe--------
Confidence 89998875 3322211 11111223333333 3455555442 2599999987 5443331
Q ss_pred CCCCCceeeEEEEEcCCEEEEEcCcCCCCC--CCCcEEEEEcCC
Q 016774 260 GFSLPRVGHSATLILGGRVLIYGGEDSARR--RKDDFWVLDTKA 301 (383)
Q Consensus 260 ~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~--~~~~~~~~d~~~ 301 (383)
+....-.++....++..+++++...... .-..+.++|+.+
T Consensus 251 --~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~ 292 (433)
T 3bws_A 251 --DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK 292 (433)
T ss_dssp --CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT
T ss_pred --cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC
Confidence 1111223333324565555555432211 123688999873
No 29
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=92.77 E-value=5 Score=35.62 Aligned_cols=200 Identities=12% Similarity=0.060 Sum_probs=97.4
Q ss_pred cceeeeecCCCCCCCCCCCcccceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEE
Q 016774 21 VSCRNISDADGDLVLPNPRASHSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVV 100 (383)
Q Consensus 21 ~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~ 100 (383)
.+|+.+...... + .....++....+.+|+.|- . . .++.. .+ ...+|+++....+.+-....++.
T Consensus 66 ~tW~~~~~~~~~---~-~~~~~~i~~~~~~~~~~g~--~-----g--~i~~S-~D--gG~tW~~~~~~~~~~~~~~~i~~ 129 (327)
T 2xbg_A 66 QTWEPRTLVLDH---S-DYRFNSVSFQGNEGWIVGE--P-----P--IMLHT-TD--GGQSWSQIPLDPKLPGSPRLIKA 129 (327)
T ss_dssp SSCEECCCCCSC---C-CCEEEEEEEETTEEEEEEE--T-----T--EEEEE-SS--TTSSCEECCCCTTCSSCEEEEEE
T ss_pred CCCeECCCCCCC---C-CccEEEEEecCCeEEEEEC--C-----C--eEEEE-CC--CCCCceECccccCCCCCeEEEEE
Confidence 478887543211 1 1112333334668887652 1 1 22322 11 34599998632222222233443
Q ss_pred -ECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccc
Q 016774 101 -IGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGD 179 (383)
Q Consensus 101 -~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 179 (383)
-++++|+.|.. + .+++-+= .-.+|+.+... .+...+.++...++.+++.|- . ..
T Consensus 130 ~~~~~~~~~~~~---g----~v~~S~D-------gG~tW~~~~~~----~~~~~~~~~~~~~~~~~~~g~---~----G~ 184 (327)
T 2xbg_A 130 LGNGSAEMITNV---G----AIYRTKD-------SGKNWQALVQE----AIGVMRNLNRSPSGEYVAVSS---R----GS 184 (327)
T ss_dssp EETTEEEEEETT---C----CEEEESS-------TTSSEEEEECS----CCCCEEEEEECTTSCEEEEET---T----SS
T ss_pred ECCCCEEEEeCC---c----cEEEEcC-------CCCCCEEeecC----CCcceEEEEEcCCCcEEEEEC---C----Cc
Confidence 35678887642 1 2433211 25689987642 122334444445556776652 1 23
Q ss_pred eEEEecc-CCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcc-cCccceEEecccccCC
Q 016774 180 TWVLELS-ENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY-EGFFKWVQIPYELQNI 257 (383)
Q Consensus 180 ~~~~d~~-~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~-~~~~~W~~i~~~~~~~ 257 (383)
+++-+-. .. .|+.+.. +.+...+.++...++.+|+.+... .+++.+.+ . .+|+.+.
T Consensus 185 ~~~S~d~gG~----tW~~~~~---~~~~~~~~~~~~~~g~~~~~~~~G-------~~~~s~~D~G--~tW~~~~------ 242 (327)
T 2xbg_A 185 FYSTWEPGQT----AWEPHNR---TTSRRLHNMGFTPDGRLWMIVNGG-------KIAFSDPDNS--ENWGELL------ 242 (327)
T ss_dssp EEEEECTTCS----SCEEEEC---CSSSCEEEEEECTTSCEEEEETTT-------EEEEEETTEE--EEECCCB------
T ss_pred EEEEeCCCCC----ceeECCC---CCCCccceeEECCCCCEEEEeCCc-------eEEEecCCCC--CeeEecc------
Confidence 5554322 34 8998862 333444555555567788776431 24443222 4 7898873
Q ss_pred CCCCCCCceeeEEEEEcCCEEEEEcC
Q 016774 258 PAGFSLPRVGHSATLILGGRVLIYGG 283 (383)
Q Consensus 258 ~~~~p~~r~~~~~~~~~~~~l~i~GG 283 (383)
...++.....++.....++.+|+.|+
T Consensus 243 ~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 243 SPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp CTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred CCcccCCcceEEEEecCCCEEEEEeC
Confidence 11122222223333224677888876
No 30
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.37 E-value=5.9 Score=35.53 Aligned_cols=162 Identities=15% Similarity=0.163 Sum_probs=86.5
Q ss_pred ceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCC-C-----CCCcceeEEEECCEEEEEcCccCCCC
Q 016774 43 SLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGI-P-----SGRFGHTCVVIGDCLVLFGGINDRGN 116 (383)
Q Consensus 43 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~-p-----~~r~~~~~~~~~~~iyv~GG~~~~~~ 116 (383)
+.++.++++|+... ...++.++..+ ....|+.-.... + ......+.+..+++||+....
T Consensus 48 ~p~v~~~~v~~~~~-------~g~v~a~d~~t---G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~----- 112 (376)
T 3q7m_A 48 HPALADNVVYAADR-------AGLVKALNADD---GKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK----- 112 (376)
T ss_dssp CCEEETTEEEEECT-------TSEEEEEETTT---CCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-----
T ss_pred ccEEECCEEEEEcC-------CCeEEEEEccC---CceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-----
Confidence 45557889888754 13667777643 234787543111 0 223334555678888885431
Q ss_pred CccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEE
Q 016774 117 RHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQ 196 (383)
Q Consensus 117 ~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~ 196 (383)
..++.+|.. +-+..|+.-.... .....+. .++.+|+... ...++.+|..++ +..|+.
T Consensus 113 --g~l~a~d~~-----tG~~~W~~~~~~~------~~~~p~~-~~~~v~v~~~-------~g~l~~~d~~tG--~~~W~~ 169 (376)
T 3q7m_A 113 --AQVYALNTS-----DGTVAWQTKVAGE------ALSRPVV-SDGLVLIHTS-------NGQLQALNEADG--AVKWTV 169 (376)
T ss_dssp --SEEEEEETT-----TCCEEEEEECSSC------CCSCCEE-ETTEEEEECT-------TSEEEEEETTTC--CEEEEE
T ss_pred --CEEEEEECC-----CCCEEEEEeCCCc------eEcCCEE-ECCEEEEEcC-------CCeEEEEECCCC--cEEEEE
Confidence 358899982 1245687643211 1112233 3447777432 236999998876 345876
Q ss_pred cccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEe
Q 016774 197 LVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 197 ~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i 250 (383)
....+....+...+.+.. ++.+|+ |... ..++.+|+.++...|+.-
T Consensus 170 ~~~~~~~~~~~~~~~~~~-~~~v~~-g~~~------g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 170 NLDMPSLSLRGESAPTTA-FGAAVV-GGDN------GRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp ECCC-----CCCCCCEEE-TTEEEE-CCTT------TEEEEEETTTCCEEEEEE
T ss_pred eCCCCceeecCCCCcEEE-CCEEEE-EcCC------CEEEEEECCCCcEEEEEe
Confidence 542111111222233334 466555 4321 258999998765778765
No 31
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.35 E-value=5.5 Score=35.11 Aligned_cols=32 Identities=13% Similarity=0.086 Sum_probs=17.9
Q ss_pred eEEEEcCCEEEEEcccCCCCCccccEEEEEcc-cCccceEE
Q 016774 210 SLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY-EGFFKWVQ 249 (383)
Q Consensus 210 ~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~-~~~~~W~~ 249 (383)
+++.-.++++|+.+... +.+++|++. . .+...
T Consensus 145 ~~~~spdg~l~v~~~~~------~~v~~~~~~~~--g~~~~ 177 (347)
T 3hfq_A 145 YTDLTPDNRLAVIDLGS------DKVYVYNVSDA--GQLSE 177 (347)
T ss_dssp EEEECTTSCEEEEETTT------TEEEEEEECTT--SCEEE
T ss_pred EEEECCCCcEEEEeCCC------CEEEEEEECCC--CcEEE
Confidence 34444456666654332 258888887 4 44443
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=92.30 E-value=6 Score=35.43 Aligned_cols=143 Identities=11% Similarity=0.050 Sum_probs=70.6
Q ss_pred CEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCc-EEEEEcccCCCCCcccceE
Q 016774 103 DCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNR-KMVIHAGIGLYGLRLGDTW 181 (383)
Q Consensus 103 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~ 181 (383)
..+|+.|+.. ..+.++|+ .+.+.......+ . .-.+++...++ .+++.+.. -..++
T Consensus 44 ~~l~~~~~~d------~~i~v~d~-------~~~~~~~~~~~~---~--~v~~~~~spdg~~l~~~~~~------~~~v~ 99 (391)
T 1l0q_A 44 TKVYVANAHS------NDVSIIDT-------ATNNVIATVPAG---S--SPQGVAVSPDGKQVYVTNMA------SSTLS 99 (391)
T ss_dssp SEEEEEEGGG------TEEEEEET-------TTTEEEEEEECS---S--SEEEEEECTTSSEEEEEETT------TTEEE
T ss_pred CEEEEECCCC------CeEEEEEC-------CCCeEEEEEECC---C--CccceEECCCCCEEEEEECC------CCEEE
Confidence 3477776543 25888888 344443322211 1 22233333333 45555432 24589
Q ss_pred EEeccCCcccCceEEcccCCCCCCCCCceEEEEcCC-EEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCC
Q 016774 182 VLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGN-RTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAG 260 (383)
Q Consensus 182 ~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~ 260 (383)
++|+.++ +...... . .....++....++ .+++.++.+ ..|+++|+.+ .+..... ..+
T Consensus 100 v~d~~~~----~~~~~~~--~--~~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~--~~~~~~~-----~~~- 157 (391)
T 1l0q_A 100 VIDTTSN----TVAGTVK--T--GKSPLGLALSPDGKKLYVTNNGD------KTVSVINTVT--KAVINTV-----SVG- 157 (391)
T ss_dssp EEETTTT----EEEEEEE--C--SSSEEEEEECTTSSEEEEEETTT------TEEEEEETTT--TEEEEEE-----ECC-
T ss_pred EEECCCC----eEEEEEe--C--CCCcceEEECCCCCEEEEEeCCC------CEEEEEECCC--CcEEEEE-----ecC-
Confidence 9999887 4333221 1 1112233333334 465665542 2699999987 5544331 011
Q ss_pred CCCCceeeEEEEEcCC-EEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 261 FSLPRVGHSATLILGG-RVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 261 ~p~~r~~~~~~~~~~~-~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
..-.++....++ .+++.++.+ ..+.++|+.+
T Consensus 158 ----~~~~~~~~~~dg~~l~~~~~~~------~~v~~~d~~~ 189 (391)
T 1l0q_A 158 ----RSPKGIAVTPDGTKVYVANFDS------MSISVIDTVT 189 (391)
T ss_dssp ----SSEEEEEECTTSSEEEEEETTT------TEEEEEETTT
T ss_pred ----CCcceEEECCCCCEEEEEeCCC------CEEEEEECCC
Confidence 111223322344 566666553 3488999873
No 33
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=91.60 E-value=7.3 Score=34.92 Aligned_cols=193 Identities=13% Similarity=0.144 Sum_probs=100.6
Q ss_pred cceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEEECCEEEEEcCccCCCCCccce
Q 016774 42 HSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDT 121 (383)
Q Consensus 42 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 121 (383)
...+..++.+|+... ...++.++..+ ....|+.-... ....+.+..++.+|+.... ..+
T Consensus 97 ~~~~~~~~~v~v~~~-------~g~l~a~d~~t---G~~~W~~~~~~----~~~~~p~~~~~~v~v~~~~-------g~l 155 (376)
T 3q7m_A 97 GGVTVSGGHVYIGSE-------KAQVYALNTSD---GTVAWQTKVAG----EALSRPVVSDGLVLIHTSN-------GQL 155 (376)
T ss_dssp EEEEEETTEEEEEET-------TSEEEEEETTT---CCEEEEEECSS----CCCSCCEEETTEEEEECTT-------SEE
T ss_pred cCceEeCCEEEEEcC-------CCEEEEEECCC---CCEEEEEeCCC----ceEcCCEEECCEEEEEcCC-------CeE
Confidence 334455778887543 14677787744 23478754221 1122345567778775431 258
Q ss_pred eeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCC
Q 016774 122 WIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHP 201 (383)
Q Consensus 122 ~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~ 201 (383)
+.+|.. +.+..|+.-.... ....+...+.+.. ++.+|+ |.. -..++.+|+.++ +..|+... .
T Consensus 156 ~~~d~~-----tG~~~W~~~~~~~-~~~~~~~~~~~~~-~~~v~~-g~~------~g~l~~~d~~tG--~~~w~~~~--~ 217 (376)
T 3q7m_A 156 QALNEA-----DGAVKWTVNLDMP-SLSLRGESAPTTA-FGAAVV-GGD------NGRVSAVLMEQG--QMIWQQRI--S 217 (376)
T ss_dssp EEEETT-----TCCEEEEEECCC------CCCCCCEEE-TTEEEE-CCT------TTEEEEEETTTC--CEEEEEEC--C
T ss_pred EEEECC-----CCcEEEEEeCCCC-ceeecCCCCcEEE-CCEEEE-EcC------CCEEEEEECCCC--cEEEEEec--c
Confidence 889972 1245587643211 1111112233333 446666 321 235899998765 45677553 1
Q ss_pred CCCCC--------CCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEE
Q 016774 202 SPPAR--------SGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLI 273 (383)
Q Consensus 202 ~p~~r--------~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~ 273 (383)
.|... .....+.. ++.+|+.+.. ..++.+|+.++...|+.-. . . ..+.+ .
T Consensus 218 ~~~~~~~~~~~~~~~~~p~~~-~~~v~~~~~~-------g~l~~~d~~tG~~~w~~~~-------~-----~-~~~~~-~ 275 (376)
T 3q7m_A 218 QATGSTEIDRLSDVDTTPVVV-NGVVFALAYN-------GNLTALDLRSGQIMWKREL-------G-----S-VNDFI-V 275 (376)
T ss_dssp C-----------CCCCCCEEE-TTEEEEECTT-------SCEEEEETTTCCEEEEECC-------C-----C-EEEEE-E
T ss_pred cCCCCcccccccccCCCcEEE-CCEEEEEecC-------cEEEEEECCCCcEEeeccC-------C-----C-CCCce-E
Confidence 11111 11222333 5777765421 2589999987556787641 1 1 12233 3
Q ss_pred cCCEEEEEcCcCCCCCCCCcEEEEEcCCC
Q 016774 274 LGGRVLIYGGEDSARRRKDDFWVLDTKAI 302 (383)
Q Consensus 274 ~~~~l~i~GG~~~~~~~~~~~~~~d~~~~ 302 (383)
.++.+|+.... ..++.+|..+.
T Consensus 276 ~~~~l~~~~~~-------g~l~~~d~~tG 297 (376)
T 3q7m_A 276 DGNRIYLVDQN-------DRVMALTIDGG 297 (376)
T ss_dssp ETTEEEEEETT-------CCEEEEETTTC
T ss_pred ECCEEEEEcCC-------CeEEEEECCCC
Confidence 67888886532 35889998743
No 34
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=91.45 E-value=7.1 Score=34.48 Aligned_cols=67 Identities=15% Similarity=0.030 Sum_probs=36.2
Q ss_pred CCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcC---CEEEEEcCcCCCCCCCC
Q 016774 216 GNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILG---GRVLIYGGEDSARRRKD 292 (383)
Q Consensus 216 ~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~---~~l~i~GG~~~~~~~~~ 292 (383)
++.+++.|+.+. .|.+||+.+....+..+.. ......+ . .++....+ +.+++.|+.++
T Consensus 171 ~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~-----~~~h~~~-v-~~~~~sp~~~~~~~l~s~~~dg------ 231 (379)
T 3jrp_A 171 ESRKFVTGGADN------LVKIWKYNSDAQTYVLEST-----LEGHSDW-V-RDVAWSPTVLLRSYLASVSQDR------ 231 (379)
T ss_dssp TTCEEEEEETTS------CEEEEEEETTTTEEEEEEE-----ECCCSSC-E-EEEEECCCCSSSEEEEEEETTS------
T ss_pred CCCEEEEEeCCC------eEEEEEecCCCcceeeEEE-----EecccCc-E-eEEEECCCCCCCCeEEEEeCCC------
Confidence 366777877642 4888888762233544420 0111111 1 22222245 68888888765
Q ss_pred cEEEEEcCC
Q 016774 293 DFWVLDTKA 301 (383)
Q Consensus 293 ~~~~~d~~~ 301 (383)
.+.++|+.+
T Consensus 232 ~i~iwd~~~ 240 (379)
T 3jrp_A 232 TCIIWTQDN 240 (379)
T ss_dssp CEEEEEESS
T ss_pred EEEEEeCCC
Confidence 377788763
No 35
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=90.04 E-value=9 Score=33.29 Aligned_cols=29 Identities=14% Similarity=0.062 Sum_probs=16.5
Q ss_pred EEEEcCCE-EEEEcccCCCCCccccEEEEEcccCccce
Q 016774 211 LTRIGGNR-TVLFGGRGVGYEVLNDVWFLDVYEGFFKW 247 (383)
Q Consensus 211 ~~~~~~~~-i~v~GG~~~~~~~~~~v~~~~~~~~~~~W 247 (383)
+..-.+++ +|+.+... +.+.+||+.+ .+.
T Consensus 181 ~~~spdg~~l~v~~~~~------~~v~v~d~~~--~~~ 210 (331)
T 3u4y_A 181 ITFTPDGNFAFVANLIG------NSIGILETQN--PEN 210 (331)
T ss_dssp EEECTTSSEEEEEETTT------TEEEEEECSS--TTS
T ss_pred eEECCCCCEEEEEeCCC------CeEEEEECCC--Ccc
Confidence 33333444 66654332 3589999987 553
No 36
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=89.45 E-value=17 Score=36.39 Aligned_cols=66 Identities=14% Similarity=0.007 Sum_probs=35.5
Q ss_pred CEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcC---CEEEEEcCcCCCCCCCCc
Q 016774 217 NRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILG---GRVLIYGGEDSARRRKDD 293 (383)
Q Consensus 217 ~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~---~~l~i~GG~~~~~~~~~~ 293 (383)
+.+++.|+.+. .|.+||+.++...+..+. .......+ -.++....+ +.+++.||.++ .
T Consensus 170 ~~~l~sgs~dg------~I~iwd~~~~~~~~~~~~-----~~~~h~~~--V~~l~~sp~~~~~~~l~s~s~Dg------~ 230 (753)
T 3jro_A 170 SRKFVTGGADN------LVKIWKYNSDAQTYVLES-----TLEGHSDW--VRDVAWSPTVLLRSYLASVSQDR------T 230 (753)
T ss_dssp GCCEEEEETTS------CEEEEEEETTTTEEEEEE-----EECCCSSC--EEEEEECCCCSSSEEEEEEESSS------C
T ss_pred CCEEEEEECCC------eEEEEeccCCcccceeee-----eecCCCCc--EEEEEeccCCCCCCEEEEEecCC------E
Confidence 56677777642 488888876323344332 00111111 122222245 78888888765 3
Q ss_pred EEEEEcCC
Q 016774 294 FWVLDTKA 301 (383)
Q Consensus 294 ~~~~d~~~ 301 (383)
+.++|+.+
T Consensus 231 I~iwd~~~ 238 (753)
T 3jro_A 231 CIIWTQDN 238 (753)
T ss_dssp EEEEEESS
T ss_pred EEEecCCC
Confidence 77888764
No 37
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=89.41 E-value=9.3 Score=32.93 Aligned_cols=112 Identities=11% Similarity=0.078 Sum_probs=65.0
Q ss_pred ceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccc
Q 016774 154 HAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLN 233 (383)
Q Consensus 154 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~ 233 (383)
|......++.+|+..|.. -.+.+..+|+.++ +=...- +.+....+...+.. ++++|+..-.. +
T Consensus 24 ~Gl~~~~dg~Lyvstg~~----~~s~v~~iD~~tg----~v~~~i--~l~~~~fgeGi~~~-g~~lyv~t~~~------~ 86 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY----GRSSVRQVALQTG----KVENIH--KMDDSYFGEGLTLL-NEKLYQVVWLK------N 86 (266)
T ss_dssp EEEEECSTTEEEEEECST----TTCEEEEEETTTC----CEEEEE--ECCTTCCEEEEEEE-TTEEEEEETTC------S
T ss_pred ccEEEeCCCeEEEECCCC----CCCEEEEEECCCC----CEEEEE--ecCCCcceEEEEEe-CCEEEEEEecC------C
Confidence 455555547999987742 1366999999987 432221 23333333445555 58999886542 3
Q ss_pred cEEEEEcccCccc-eEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCC
Q 016774 234 DVWFLDVYEGFFK-WVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 302 (383)
Q Consensus 234 ~v~~~~~~~~~~~-W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~ 302 (383)
.+++||+.+ .+ =.+++ .+ .|. +..... .++++|+.-| .+.++.+|+++.
T Consensus 87 ~v~viD~~t--~~v~~~i~------~g-~~~---g~glt~-Dg~~l~vs~g-------s~~l~viD~~t~ 136 (266)
T 2iwa_A 87 IGFIYDRRT--LSNIKNFT------HQ-MKD---GWGLAT-DGKILYGSDG-------TSILYEIDPHTF 136 (266)
T ss_dssp EEEEEETTT--TEEEEEEE------CC-SSS---CCEEEE-CSSSEEEECS-------SSEEEEECTTTC
T ss_pred EEEEEECCC--CcEEEEEE------CC-CCC---eEEEEE-CCCEEEEECC-------CCeEEEEECCCC
Confidence 699999876 32 12232 11 122 223332 5667887654 246899998854
No 38
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=89.30 E-value=2.3 Score=36.61 Aligned_cols=107 Identities=10% Similarity=0.121 Sum_probs=65.4
Q ss_pred ECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEE
Q 016774 159 IDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFL 238 (383)
Q Consensus 159 ~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~ 238 (383)
+.++.+|+..|.. + .+.+.++|++++ +=...- +++..-.+..+... +++||+..... +.+++|
T Consensus 50 ~~~~~LyestG~~--g--~S~v~~vD~~Tg----kv~~~~--~l~~~~FgeGit~~-g~~ly~ltw~~------~~v~v~ 112 (262)
T 3nol_A 50 YRNGYFYESTGLN--G--RSSIRKVDIESG----KTLQQI--ELGKRYFGEGISDW-KDKIVGLTWKN------GLGFVW 112 (262)
T ss_dssp EETTEEEEEEEET--T--EEEEEEECTTTC----CEEEEE--ECCTTCCEEEEEEE-TTEEEEEESSS------SEEEEE
T ss_pred EECCEEEEECCCC--C--CceEEEEECCCC----cEEEEE--ecCCccceeEEEEe-CCEEEEEEeeC------CEEEEE
Confidence 3356999998852 1 357899999987 433322 33433344445666 58999986643 369999
Q ss_pred EcccCccce-EEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCCc
Q 016774 239 DVYEGFFKW-VQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIP 303 (383)
Q Consensus 239 ~~~~~~~~W-~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~ 303 (383)
|+++ .+- .+++ .+-.+.+.+. .++.||+.-|. +.++.+|+++..
T Consensus 113 D~~t--~~~~~ti~-----------~~~eG~glt~-dg~~L~~SdGs-------~~i~~iDp~T~~ 157 (262)
T 3nol_A 113 NIRN--LRQVRSFN-----------YDGEGWGLTH-NDQYLIMSDGT-------PVLRFLDPESLT 157 (262)
T ss_dssp ETTT--CCEEEEEE-----------CSSCCCCEEE-CSSCEEECCSS-------SEEEEECTTTCS
T ss_pred ECcc--CcEEEEEE-----------CCCCceEEec-CCCEEEEECCC-------CeEEEEcCCCCe
Confidence 9987 432 2232 1223334443 56677776542 358999988543
No 39
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.13 E-value=10 Score=32.71 Aligned_cols=151 Identities=11% Similarity=-0.090 Sum_probs=83.2
Q ss_pred cceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEEECCEEEEEcCccCCCCCccce
Q 016774 42 HSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDT 121 (383)
Q Consensus 42 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 121 (383)
+.+...++.+|+-.|.. ..+..+|+.+. +-.+-. .+..-.+.+++..+++||+....+ +.+
T Consensus 58 qGL~~~~~~Ly~stG~~------g~v~~iD~~Tg-----kv~~~~--l~~~~FgeGit~~g~~Ly~ltw~~------~~v 118 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ------GTLRQLSLESA-----QPVWME--RLGNIFAEGLASDGERLYQLTWTE------GLL 118 (268)
T ss_dssp EEEEEETTEEEEEETTT------TEEEECCSSCS-----SCSEEE--ECTTCCEEEEEECSSCEEEEESSS------CEE
T ss_pred ceEEEECCEEEEEcCCC------CEEEEEECCCC-----cEEeEE--CCCCcceeEEEEeCCEEEEEEccC------CEE
Confidence 45555688999998842 12556666443 111111 233445567888899999986542 368
Q ss_pred eeeecccccCCcccccEE-EccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccC
Q 016774 122 WIGQIACHENLGITLSWR-LLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTH 200 (383)
Q Consensus 122 ~~~d~~~~~~~~~~~~W~-~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~ 200 (383)
++||. ++.+-. +++. +-.+.+.+.. ++.+|+.-| .+.++.+|+.+.. .-..++..
T Consensus 119 ~V~D~-------~Tl~~~~ti~~------~~eGwGLt~D-g~~L~vSdG-------s~~l~~iDp~T~~---v~~~I~V~ 174 (268)
T 3nok_A 119 FTWSG-------MPPQRERTTRY------SGEGWGLCYW-NGKLVRSDG-------GTMLTFHEPDGFA---LVGAVQVK 174 (268)
T ss_dssp EEEET-------TTTEEEEEEEC------SSCCCCEEEE-TTEEEEECS-------SSEEEEECTTTCC---EEEEEECE
T ss_pred EEEEC-------CcCcEEEEEeC------CCceeEEecC-CCEEEEECC-------CCEEEEEcCCCCe---EEEEEEeC
Confidence 99998 344433 2222 1223445444 448888754 3569999998851 11222211
Q ss_pred CCCCCCCC-ceEEEEcCCEEEEEcccCCCCCccccEEEEEccc
Q 016774 201 PSPPARSG-HSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE 242 (383)
Q Consensus 201 ~~p~~r~~-~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~ 242 (383)
..+.+... --+... +++||+--- ..++|.+.|+++
T Consensus 175 ~~g~~v~~lNeLe~~-dG~lyanvw------~s~~I~vIDp~T 210 (268)
T 3nok_A 175 LRGQPVELINELECA-NGVIYANIW------HSSDVLEIDPAT 210 (268)
T ss_dssp ETTEECCCEEEEEEE-TTEEEEEET------TCSEEEEECTTT
T ss_pred CCCcccccccccEEe-CCEEEEEEC------CCCeEEEEeCCC
Confidence 12222111 113334 577774321 134799999987
No 40
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.64 E-value=12 Score=32.98 Aligned_cols=206 Identities=14% Similarity=0.120 Sum_probs=98.1
Q ss_pred hhhhhccc--cccceeeeecCCCCCCCCCCCcccceeee-CCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCC
Q 016774 11 LYRQVTQL--ESVSCRNISDADGDLVLPNPRASHSLNFV-SNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNS 87 (383)
Q Consensus 11 ~~~~~~~~--~~~~W~~~~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 87 (383)
+++.+|.. ...+|+.+.... ...-.++... .+.+|+.|-. . .++.... ...+|+++..
T Consensus 13 ~~~~~~~s~d~g~~W~~~~~~~-------~~~~~~v~~~~~~~~~~~G~~-------g--~i~~s~D---gG~tW~~~~~ 73 (327)
T 2xbg_A 13 VPRGSAIPALDYNPWEAIQLPT-------TATILDMSFIDRHHGWLVGVN-------A--TLMETRD---GGQTWEPRTL 73 (327)
T ss_dssp -----CCCBCSSCCEEEEECSC-------SSCEEEEEESSSSCEEEEETT-------T--EEEEESS---TTSSCEECCC
T ss_pred cccceeecCCCCCCceEeecCC-------CCcEEEEEECCCCcEEEEcCC-------C--eEEEeCC---CCCCCeECCC
Confidence 45556643 446899886332 1111222222 4577876531 1 1232211 3348998753
Q ss_pred CCCC-CCcceeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEE
Q 016774 88 GIPS-GRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVI 166 (383)
Q Consensus 88 ~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v 166 (383)
..+. .....++...++.+|+.|- . + .+++-+= .-.+|+.+......|.. ....+...++.+|+
T Consensus 74 ~~~~~~~~~~~i~~~~~~~~~~g~-~--g----~i~~S~D-------gG~tW~~~~~~~~~~~~--~~~i~~~~~~~~~~ 137 (327)
T 2xbg_A 74 VLDHSDYRFNSVSFQGNEGWIVGE-P--P----IMLHTTD-------GGQSWSQIPLDPKLPGS--PRLIKALGNGSAEM 137 (327)
T ss_dssp CCSCCCCEEEEEEEETTEEEEEEE-T--T----EEEEESS-------TTSSCEECCCCTTCSSC--EEEEEEEETTEEEE
T ss_pred CCCCCCccEEEEEecCCeEEEEEC-C--C----eEEEECC-------CCCCceECccccCCCCC--eEEEEEECCCCEEE
Confidence 2211 2223444455677888752 1 1 2332111 25789997643212221 22333445557887
Q ss_pred EcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcc-cCcc
Q 016774 167 HAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY-EGFF 245 (383)
Q Consensus 167 ~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~-~~~~ 245 (383)
.|.. + .+++-+=.-. +|+++.. +.+...+.+....++.+++.|-.. .+++-.-. . .
T Consensus 138 ~~~~---g----~v~~S~DgG~----tW~~~~~---~~~~~~~~~~~~~~~~~~~~g~~G-------~~~~S~d~gG--~ 194 (327)
T 2xbg_A 138 ITNV---G----AIYRTKDSGK----NWQALVQ---EAIGVMRNLNRSPSGEYVAVSSRG-------SFYSTWEPGQ--T 194 (327)
T ss_dssp EETT---C----CEEEESSTTS----SEEEEEC---SCCCCEEEEEECTTSCEEEEETTS-------SEEEEECTTC--S
T ss_pred EeCC---c----cEEEEcCCCC----CCEEeec---CCCcceEEEEEcCCCcEEEEECCC-------cEEEEeCCCC--C
Confidence 7641 1 2444322233 8999872 222334455555456676665321 24444322 4 7
Q ss_pred ceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcC
Q 016774 246 KWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGG 283 (383)
Q Consensus 246 ~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG 283 (383)
+|+.+. .+.+...+.++...++.+|+.+.
T Consensus 195 tW~~~~---------~~~~~~~~~~~~~~~g~~~~~~~ 223 (327)
T 2xbg_A 195 AWEPHN---------RTTSRRLHNMGFTPDGRLWMIVN 223 (327)
T ss_dssp SCEEEE---------CCSSSCEEEEEECTTSCEEEEET
T ss_pred ceeECC---------CCCCCccceeEECCCCCEEEEeC
Confidence 899984 12233334444435677887764
No 41
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=88.58 E-value=12 Score=33.33 Aligned_cols=109 Identities=12% Similarity=0.094 Sum_probs=53.1
Q ss_pred EECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcC-CEEEEEcccCCCCCccccEE
Q 016774 158 CIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGG-NRTVLFGGRGVGYEVLNDVW 236 (383)
Q Consensus 158 ~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~~v~ 236 (383)
...++..++.|+.+ ..+.++|+.++ +-...- .... ....++....+ +.+++.|+.+. .|.
T Consensus 147 ~spdg~~l~sgs~d------g~v~iwd~~~~----~~~~~~--~~h~-~~v~~v~~s~~~~~~~~s~~~dg------~v~ 207 (357)
T 4g56_B 147 VFSDGTQAVSGGKD------FSVKVWDLSQK----AVLKSY--NAHS-SEVNCVAACPGKDTIFLSCGEDG------RIL 207 (357)
T ss_dssp ECSSSSEEEEEETT------SCEEEEETTTT----EEEEEE--CCCS-SCEEEEEECTTCSSCEEEEETTS------CEE
T ss_pred ECCCCCEEEEEeCC------CeEEEEECCCC----cEEEEE--cCCC-CCEEEEEEccCCCceeeeeccCC------ceE
Confidence 34455677777742 34788898876 322221 1111 11112222222 34677777642 478
Q ss_pred EEEcccCccceEEecccccCCCCCCCCCceeeEEEEE--cCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 237 FLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLI--LGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 237 ~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~--~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
++|+.+ .+-.... ..........++.+ .++.+++.|+.++ .+.++|+.+
T Consensus 208 ~wd~~~--~~~~~~~--------~~~~~~~~v~~v~~sp~~~~~la~g~~d~------~i~~wd~~~ 258 (357)
T 4g56_B 208 LWDTRK--PKPATRI--------DFCASDTIPTSVTWHPEKDDTFACGDETG------NVSLVNIKN 258 (357)
T ss_dssp ECCTTS--SSCBCBC--------CCTTCCSCEEEEEECTTSTTEEEEEESSS------CEEEEESSC
T ss_pred EEECCC--Cceeeee--------eeccccccccchhhhhcccceEEEeeccc------ceeEEECCC
Confidence 888876 3322210 01111111122222 2456888887654 378888874
No 42
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=87.82 E-value=15 Score=33.09 Aligned_cols=135 Identities=11% Similarity=0.049 Sum_probs=68.9
Q ss_pred ceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEccc
Q 016774 120 DTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVT 199 (383)
Q Consensus 120 ~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~ 199 (383)
.++++|+ .+.+........ ....-.+++...++.+++.|+.+ ..+.++|+.+. +....-
T Consensus 114 ~v~lw~~-------~~~~~~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~d------g~i~iwd~~~~----~~~~~~- 172 (401)
T 4aez_A 114 NVYVWNA-------DSGSVSALAETD---ESTYVASVKWSHDGSFLSVGLGN------GLVDIYDVESQ----TKLRTM- 172 (401)
T ss_dssp EEEEEET-------TTCCEEEEEECC---TTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTC----CEEEEE-
T ss_pred eEEEeeC-------CCCcEeEeeecC---CCCCEEEEEECCCCCEEEEECCC------CeEEEEECcCC----eEEEEe-
Confidence 4888888 355544433211 11122233444455677777642 35888898876 332222
Q ss_pred CCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEE
Q 016774 200 HPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVL 279 (383)
Q Consensus 200 ~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~ 279 (383)
.. ....-..+... +.+++.|+.+ ..|.++|+......-..+. ..... -.++....++.++
T Consensus 173 -~~--~~~~v~~~~~~-~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~--------~~~~~--v~~~~~~~~~~~l 232 (401)
T 4aez_A 173 -AG--HQARVGCLSWN-RHVLSSGSRS------GAIHHHDVRIANHQIGTLQ--------GHSSE--VCGLAWRSDGLQL 232 (401)
T ss_dssp -CC--CSSCEEEEEEE-TTEEEEEETT------SEEEEEETTSSSCEEEEEE--------CCSSC--EEEEEECTTSSEE
T ss_pred -cC--CCCceEEEEEC-CCEEEEEcCC------CCEEEEecccCcceeeEEc--------CCCCC--eeEEEEcCCCCEE
Confidence 11 11122334443 5677777764 2588899874111122221 11111 1222222567788
Q ss_pred EEcCcCCCCCCCCcEEEEEcCC
Q 016774 280 IYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 280 i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
+.|+.++ .+.++|+.+
T Consensus 233 ~s~~~d~------~v~iwd~~~ 248 (401)
T 4aez_A 233 ASGGNDN------VVQIWDARS 248 (401)
T ss_dssp EEEETTS------CEEEEETTC
T ss_pred EEEeCCC------eEEEccCCC
Confidence 8888754 488899874
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=87.43 E-value=14 Score=32.38 Aligned_cols=153 Identities=10% Similarity=0.064 Sum_probs=70.9
Q ss_pred CCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEEE-CCEEEEEcCccCCCCCccceeeeec
Q 016774 48 SNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVVI-GDCLVLFGGINDRGNRHNDTWIGQI 126 (383)
Q Consensus 48 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~ 126 (383)
++++++.|+. ...+.+++.... ++..+.........-.+++.. ++++++.|+.+. .+.++|+
T Consensus 19 ~~~~l~~~~~------d~~v~i~~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg------~i~vwd~ 81 (372)
T 1k8k_C 19 DRTQIAICPN------NHEVHIYEKSGN-----KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR------NAYVWTL 81 (372)
T ss_dssp TSSEEEEECS------SSEEEEEEEETT-----EEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS------CEEEEEE
T ss_pred CCCEEEEEeC------CCEEEEEeCCCC-----cEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC------eEEEEEC
Confidence 4566777763 245677777443 333321100111111222223 344666666432 4778888
Q ss_pred ccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCC
Q 016774 127 ACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPAR 206 (383)
Q Consensus 127 ~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r 206 (383)
.+.++....... .....-.++....++..++.|+.+ ..+..+|+++. -.|........+...
T Consensus 82 -------~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~---~~~~~~~~~~~~~~~ 143 (372)
T 1k8k_C 82 -------KGRTWKPTLVIL--RINRAARCVRWAPNEKKFAVGSGS------RVISICYFEQE---NDWWVCKHIKKPIRS 143 (372)
T ss_dssp -------ETTEEEEEEECC--CCSSCEEEEEECTTSSEEEEEETT------SSEEEEEEETT---TTEEEEEEECTTCCS
T ss_pred -------CCCeeeeeEEee--cCCCceeEEEECCCCCEEEEEeCC------CEEEEEEecCC---CcceeeeeeecccCC
Confidence 355554432111 111112233334455677777642 34666776654 123333211112122
Q ss_pred CCceEEEEcCCEEEEEcccCCCCCccccEEEEEcc
Q 016774 207 SGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY 241 (383)
Q Consensus 207 ~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~ 241 (383)
...++....++.+++.|+.+. .+.+||+.
T Consensus 144 ~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~ 172 (372)
T 1k8k_C 144 TVLSLDWHPNSVLLAAGSCDF------KCRIFSAY 172 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTS------CEEEEECC
T ss_pred CeeEEEEcCCCCEEEEEcCCC------CEEEEEcc
Confidence 223334444566777777632 47888864
No 44
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=87.37 E-value=13 Score=31.62 Aligned_cols=153 Identities=12% Similarity=0.087 Sum_probs=88.5
Q ss_pred cceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEEECCEEEEEcCccCCCCCccce
Q 016774 42 HSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDT 121 (383)
Q Consensus 42 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 121 (383)
+.+...++.+|+-.|.. ..+.+..+++.+. +-.+-. ..|..-.+.+++..+++||+....+ +.+
T Consensus 24 qGL~~~~~~LyestG~~----g~S~v~~vD~~tg-----kv~~~~-~l~~~~fgeGi~~~~~~ly~ltw~~------~~v 87 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGET----GRSSVRKVDLETG-----RILQRA-EVPPPYFGAGIVAWRDRLIQLTWRN------HEG 87 (243)
T ss_dssp EEEEEETTEEEEEECCT----TSCEEEEEETTTC-----CEEEEE-ECCTTCCEEEEEEETTEEEEEESSS------SEE
T ss_pred ccEEEECCEEEEECCCC----CCceEEEEECCCC-----CEEEEE-eCCCCcceeEEEEeCCEEEEEEeeC------CEE
Confidence 45666788999998842 1345667777543 222211 2444557788899999999986542 468
Q ss_pred eeeecccccCCcccccEE-EccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCce-EEccc
Q 016774 122 WIGQIACHENLGITLSWR-LLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSW-QQLVT 199 (383)
Q Consensus 122 ~~~d~~~~~~~~~~~~W~-~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W-~~~~~ 199 (383)
++||. ++.+-. +++. +..+.+.+. +++.+|+.-| .+.++.+|+.+. +- ..++.
T Consensus 88 ~v~D~-------~tl~~~~ti~~------~~~Gwglt~-dg~~L~vSdg-------s~~l~~iDp~t~----~~~~~I~V 142 (243)
T 3mbr_X 88 FVYDL-------ATLTPRARFRY------PGEGWALTS-DDSHLYMSDG-------TAVIRKLDPDTL----QQVGSIKV 142 (243)
T ss_dssp EEEET-------TTTEEEEEEEC------SSCCCEEEE-CSSCEEEECS-------SSEEEEECTTTC----CEEEEEEC
T ss_pred EEEEC-------CcCcEEEEEeC------CCCceEEee-CCCEEEEECC-------CCeEEEEeCCCC----eEEEEEEE
Confidence 99998 344433 2222 223444543 4447888654 356999999875 22 22221
Q ss_pred CCCCCCCCC-ceEEEEcCCEEEEEcccCCCCCccccEEEEEccc
Q 016774 200 HPSPPARSG-HSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE 242 (383)
Q Consensus 200 ~~~p~~r~~-~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~ 242 (383)
...+.+... --+... +++||+---. .++|.+.|+.+
T Consensus 143 ~~~g~~~~~lNeLe~~-~G~lyanvw~------s~~I~vIDp~t 179 (243)
T 3mbr_X 143 TAGGRPLDNLNELEWV-NGELLANVWL------TSRIARIDPAS 179 (243)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETT------TTEEEEECTTT
T ss_pred ccCCcccccceeeEEe-CCEEEEEECC------CCeEEEEECCC
Confidence 112222111 123344 5777744322 34799999987
No 45
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=86.84 E-value=27 Score=34.95 Aligned_cols=130 Identities=6% Similarity=-0.064 Sum_probs=70.6
Q ss_pred ceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccce-EEEeccCCcccCceEEcc
Q 016774 120 DTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDT-WVLELSENFCFGSWQQLV 198 (383)
Q Consensus 120 ~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~-~~~d~~~~~~~~~W~~~~ 198 (383)
.+++||. .+.+++........|... -.+.+...++.+++... .-+ ++||++++ +++...
T Consensus 516 Gl~~~~~-------~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWi~T~--------~Glv~~~d~~~~----~~~~~~ 575 (781)
T 3v9f_A 516 GVGIYTP-------DMQLVRKFNQYEGFCSNT-INQIYRSSKGQMWLATG--------EGLVCFPSARNF----DYQVFQ 575 (781)
T ss_dssp CEEEECT-------TCCEEEEECTTTTCSCSC-EEEEEECTTSCEEEEET--------TEEEEESCTTTC----CCEEEC
T ss_pred CEEEEeC-------CCCeEEEccCCCCCCCCe-eEEEEECCCCCEEEEEC--------CCceEEECCCCC----cEEEcc
Confidence 3788988 467777765422222211 11222224557777432 235 88898887 776655
Q ss_pred -cCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEE-cCC
Q 016774 199 -THPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLI-LGG 276 (383)
Q Consensus 199 -~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~-~~~ 276 (383)
...+|.... .+++...++.|++.+.. .+.+|++.+ .+++... ....++...+...++.. .++
T Consensus 576 ~~~gl~~~~i-~~i~~d~~g~lW~~t~~--------Gl~~~~~~~--~~~~~~~-----~~dGl~~~~f~~~~~~~~~~G 639 (781)
T 3v9f_A 576 RKEGLPNTHI-RAISEDKNGNIWASTNT--------GISCYITSK--KCFYTYD-----HSNNIPQGSFISGCVTKDHNG 639 (781)
T ss_dssp GGGTCSCCCC-CEEEECSSSCEEEECSS--------CEEEEETTT--TEEEEEC-----GGGTCCSSCEEEEEEEECTTS
T ss_pred ccCCCCCceE-EEEEECCCCCEEEEcCC--------ceEEEECCC--CceEEec-----ccCCccccccccCceEECCCC
Confidence 223443332 44555445677776532 389999998 8887774 22335554443333332 355
Q ss_pred EEEEEcCcCC
Q 016774 277 RVLIYGGEDS 286 (383)
Q Consensus 277 ~l~i~GG~~~ 286 (383)
.|| +||.++
T Consensus 640 ~l~-~g~~~G 648 (781)
T 3v9f_A 640 LIY-FGSING 648 (781)
T ss_dssp CEE-EEETTE
T ss_pred EEE-EECCCc
Confidence 544 465543
No 46
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=86.31 E-value=14 Score=30.99 Aligned_cols=199 Identities=10% Similarity=0.033 Sum_probs=89.7
Q ss_pred CCEEEEEccccCCCCCCCceEEEEecc-CcccccceEEcCCCCCCCCcceeEEEECCEEEEEcCccCCCCCccceeeeec
Q 016774 48 SNCLVLFGGGCEGGRHLDDTWVAYVGN-DFQGMLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQI 126 (383)
Q Consensus 48 ~~~i~v~GG~~~~~~~~~~~~~~~~~~-~~~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~ 126 (383)
+++.+++++ ...+++++... . +...+...............-+++.+++++.... ....+|.+++
T Consensus 52 dg~~l~~~~-------~~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~ 117 (297)
T 2ojh_A 52 DGKYLLLNS-------EGLLYRLSLAGDP-----SPEKVDTGFATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPS 117 (297)
T ss_dssp TSSEEEEEE-------TTEEEEEESSSCC-----SCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEET
T ss_pred CCCEEEEEc-------CCeEEEEeCCCCC-----CceEeccccccccccceEECCCCCEEEEEEeCCC--CcceEEEEEC
Confidence 445555553 13677787744 3 3444432111122221222223444455443221 2346788887
Q ss_pred ccccCCcccccEEEccCCCCCCCccccceeEEECCcE-EEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCC
Q 016774 127 ACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRK-MVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPA 205 (383)
Q Consensus 127 ~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~ 205 (383)
.+.....+.... . ........+++ +++.++.+ ....+|.+++.+. ....+. ..+
T Consensus 118 -------~~~~~~~~~~~~----~--~~~~~~spdg~~l~~~~~~~----~~~~l~~~~~~~~----~~~~~~--~~~-- 172 (297)
T 2ojh_A 118 -------TGGTPRLMTKNL----P--SYWHGWSPDGKSFTYCGIRD----QVFDIYSMDIDSG----VETRLT--HGE-- 172 (297)
T ss_dssp -------TCCCCEECCSSS----S--EEEEEECTTSSEEEEEEEET----TEEEEEEEETTTC----CEEECC--CSS--
T ss_pred -------CCCceEEeecCC----C--ccceEECCCCCEEEEEECCC----CceEEEEEECCCC----cceEcc--cCC--
Confidence 344444443211 1 22233333434 54444432 1246788888776 555554 111
Q ss_pred CCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcC
Q 016774 206 RSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGED 285 (383)
Q Consensus 206 r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~ 285 (383)
....++....++..+++++.... ...+|.+++.. .....+. .. .....+.....+++.+++++..
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~--~~~~~~~--------~~--~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDG--SSVERIT--------DS--AYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTS---SCEEEEEETTS--SCEEECC--------CC--SEEEEEEEECTTSSEEEEEEEE
T ss_pred CccccceECCCCCEEEEEecCCC---CccEEEECCCC--CCcEEEe--------cC--CcccCCeEECCCCCEEEEEEcC
Confidence 11122233334554554443111 23578888776 6666652 11 1112222222566666666554
Q ss_pred CCCC-----CCCcEEEEEcC
Q 016774 286 SARR-----RKDDFWVLDTK 300 (383)
Q Consensus 286 ~~~~-----~~~~~~~~d~~ 300 (383)
.... ....++++|+.
T Consensus 238 ~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 238 ADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp TTCCSCCSSEEEEEEEEETT
T ss_pred CCCCcccccCceEEEEEecC
Confidence 3211 12468899987
No 47
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=86.08 E-value=16 Score=32.30 Aligned_cols=68 Identities=15% Similarity=0.071 Sum_probs=33.0
Q ss_pred CCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEE
Q 016774 160 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 239 (383)
Q Consensus 160 ~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~ 239 (383)
.++..++.|+.+ ..+..+|+++. -.|........+......++....++.+++.|+.+. .+.+||
T Consensus 110 ~~~~~l~~~~~d------~~i~iwd~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd 174 (377)
T 3dwl_C 110 PNEDKFAVGSGA------RVISVCYFEQE---NDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR------KAYVLS 174 (377)
T ss_dssp TTSSCCEEEESS------SCEEECCC--------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS------CEEEEE
T ss_pred CCCCEEEEEecC------CeEEEEEECCc---ccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC------EEEEEE
Confidence 345666776642 24777887765 113222211111222223344444567788887642 478888
Q ss_pred ccc
Q 016774 240 VYE 242 (383)
Q Consensus 240 ~~~ 242 (383)
+..
T Consensus 175 ~~~ 177 (377)
T 3dwl_C 175 AYV 177 (377)
T ss_dssp ECC
T ss_pred EEe
Confidence 754
No 48
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=85.57 E-value=32 Score=34.53 Aligned_cols=97 Identities=12% Similarity=0.107 Sum_probs=55.1
Q ss_pred CCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcc-cCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEE
Q 016774 160 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLV-THPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFL 238 (383)
Q Consensus 160 ~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~-~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~ 238 (383)
.++.+++... .-+++||++++ +++... ...+|... ..+++...++.|++.+.. .+.+|
T Consensus 552 ~~g~lWigT~--------~Gl~~~d~~~~----~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~~--------Gl~~~ 610 (795)
T 4a2l_A 552 SNGIIWVGTR--------EGFYCFNEKDK----QIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTNR--------GISCF 610 (795)
T ss_dssp TTSCEEEEES--------SCEEEEETTTT----EEEEECGGGTCSCSC-EEEEEECTTSCEEEEETT--------EEEEE
T ss_pred CCCCEEEEeC--------CCceeECCCCC----cEEEeCCCCCCchhh-eEEEEECCCCCEEEEcCC--------ceEEE
Confidence 4557777431 13899999887 777665 22334332 233444445677776532 48899
Q ss_pred EcccCccceEEecccccCCCCCCCCCceee-EEEEEcCCEEEEEcCcC
Q 016774 239 DVYEGFFKWVQIPYELQNIPAGFSLPRVGH-SATLILGGRVLIYGGED 285 (383)
Q Consensus 239 ~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~-~~~~~~~~~l~i~GG~~ 285 (383)
++.+ .+++... ....++...... ++....++.|| +||..
T Consensus 611 ~~~~--~~~~~~~-----~~dGl~~~~f~~~~~~~~~~G~l~-~g~~~ 650 (795)
T 4a2l_A 611 NPET--EKFRNFT-----ESDGLQSNQFNTASYCRTSVGQMY-FGGIN 650 (795)
T ss_dssp ETTT--TEEEEEC-----GGGTCSCSCEEEEEEEECTTSCEE-EEETT
T ss_pred cCCC--CcEEEcC-----CcCCCccccCccCceeECCCCeEE-EecCC
Confidence 9998 8887764 223455554432 33332455555 45544
No 49
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=85.49 E-value=19 Score=31.92 Aligned_cols=111 Identities=11% Similarity=0.017 Sum_probs=54.5
Q ss_pred EEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcC-CEEEEEcccCCCCCccccE
Q 016774 157 CCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGG-NRTVLFGGRGVGYEVLNDV 235 (383)
Q Consensus 157 ~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~~v 235 (383)
+...++..++.|+.+ ..+.++|+.++ +-...-. .-. ....++....+ ..+++.|+.+. .|
T Consensus 134 ~~spdg~~l~sgs~d------~~i~iwd~~~~----~~~~~~~--~h~-~~V~~~~~~~~~~~~l~s~s~D~------~v 194 (344)
T 4gqb_B 134 SVLSSGTQAVSGSKD------ICIKVWDLAQQ----VVLSSYR--AHA-AQVTCVAASPHKDSVFLSCSEDN------RI 194 (344)
T ss_dssp EECTTSSEEEEEETT------SCEEEEETTTT----EEEEEEC--CCS-SCEEEEEECSSCTTEEEEEETTS------CE
T ss_pred EECCCCCEEEEEeCC------CeEEEEECCCC----cEEEEEc--CcC-CceEEEEecCCCCCceeeecccc------cc
Confidence 334556777777752 34788898876 3222211 111 11112222222 34777777642 48
Q ss_pred EEEEcccCccceEEecccccCCCCCCCCCceeeEEEEE-cCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 236 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLI-LGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 236 ~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~-~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.++|+.+ .+-...- ......... .++... .++.+++.|+.++ .+.++|+.+
T Consensus 195 ~iwd~~~--~~~~~~~------~~~~~~~~~-~~~~~~p~~~~~l~sg~~dg------~v~~wd~~~ 246 (344)
T 4gqb_B 195 LLWDTRC--PKPASQI------GCSAPGYLP-TSLAWHPQQSEVFVFGDENG------TVSLVDTKS 246 (344)
T ss_dssp EEEETTS--SSCEEEC------C----CCCE-EEEEECSSCTTEEEEEETTS------EEEEEESCC
T ss_pred ccccccc--cceeeee------ecceeeccc-eeeeecCCCCcceEEeccCC------cEEEEECCC
Confidence 8899887 4433220 011111111 122211 3566888887754 377888763
No 50
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=84.12 E-value=21 Score=31.22 Aligned_cols=121 Identities=8% Similarity=-0.031 Sum_probs=55.7
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCE-EEEEcccCCCCCcccc
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNR-TVLFGGRGVGYEVLND 234 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~ 234 (383)
++...++++|+.+... ....+++||+.++ +++.+......... -..++.-.+++ +|+.+... ..
T Consensus 45 ~a~spdg~l~~~~~~~----~~~~v~~~~~~~g----~~~~~~~~~~~~~~-p~~~a~spdg~~l~~~~~~~------~~ 109 (347)
T 3hfq_A 45 LALSAKDCLYSVDKED----DEGGIAAWQIDGQ----TAHKLNTVVAPGTP-PAYVAVDEARQLVYSANYHK------GT 109 (347)
T ss_dssp EEECTTCEEEEEEEET----TEEEEEEEEEETT----EEEEEEEEEEESCC-CSEEEEETTTTEEEEEETTT------TE
T ss_pred EEEccCCeEEEEEecC----CCceEEEEEecCC----cEEEeeeeecCCCC-CEEEEECCCCCEEEEEeCCC------CE
Confidence 4444556777665321 1356899999876 66655410001111 12233333454 55444221 24
Q ss_pred EEEEEcccCccceEEecccccCCCCCCCCCc----eeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 235 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPR----VGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 235 v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r----~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
+.+|++..+ ...+.+..- ...+..|.+| .-++++...++++|+.+... +.+++|++.
T Consensus 110 v~v~~~~~~-g~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~------~~v~~~~~~ 170 (347)
T 3hfq_A 110 AEVMKIAAD-GALTLTDTV--QHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS------DKVYVYNVS 170 (347)
T ss_dssp EEEEEECTT-SCEEEEEEE--ECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT------TEEEEEEEC
T ss_pred EEEEEeCCC-CCeeeccee--ecCCCCCCccccCCCceEEEECCCCcEEEEeCCC------CEEEEEEEC
Confidence 777877420 233333200 0112222211 12333433566766654332 358888886
No 51
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=83.14 E-value=28 Score=31.90 Aligned_cols=197 Identities=13% Similarity=0.116 Sum_probs=103.7
Q ss_pred cccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCC--CCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEE
Q 016774 135 TLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLY--GLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLT 212 (383)
Q Consensus 135 ~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~--~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~ 212 (383)
+..|++-.... .|....-|+.+.+++ .-|++|=...+ ...+.-++.-|.-..+..+.=.+++. .....-+-.|.-
T Consensus 269 ~spW~~t~L~~-i~~vTe~HSFa~i~~-~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~s-ey~~~AsEPCvk 345 (670)
T 3ju4_A 269 KSPWRKTDLGL-IPSVTEVHSFATIDN-NGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPS-EYEPDASEPCIK 345 (670)
T ss_dssp TSCCEEEECCS-CTTCSEEEEEEECSS-SCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCG-GGCTTEEEEEEE
T ss_pred cCCceeccccc-ccceeeeeeeeEecC-CceEEEeccCCCCcceeeEEEecccccCCcceeeeechh-hhccccccchhh
Confidence 34455444322 566666788888887 34465532111 11222222222111111122233332 122222233444
Q ss_pred EEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCC----
Q 016774 213 RIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSAR---- 288 (383)
Q Consensus 213 ~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~---- 288 (383)
++ ++.||+.--...+...-+.+.+-+... ..|+.+.++..--...+| ...+++.||+||-.-..+
T Consensus 346 yY-dgvLyLtTRgt~~~~~GS~L~rs~d~G--q~w~slrfp~nvHhtnlP--------FakvgD~l~mFgsERA~nEWE~ 414 (670)
T 3ju4_A 346 YY-DGVLYLITRGTRGDRLGSSLHRSRDIG--QTWESLRFPHNVHHTTLP--------FAKVGDDLIMFGSERAENEWEA 414 (670)
T ss_dssp EE-TTEEEEEEEESCTTSCCCEEEEESSTT--SSCEEEECTTCCCSSCCC--------EEEETTEEEEEEECSSTTCSST
T ss_pred hh-CCEEEEEecCcCCCCCcceeeeecccC--CchhheeccccccccCCC--------cceeCCEEEEEecccccccccc
Confidence 45 799998864434555666788888888 899998532111111111 123799999999653211
Q ss_pred --------CCCCcEEEEEcCCCcccccccccccccccccccceeeccC---CCCCCCccceeeeecCCCcEEEEEcCcc
Q 016774 289 --------RRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAE---GYKPNCRSFHRACPDYSGRYLYVFGGMV 356 (383)
Q Consensus 289 --------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~---~~~p~~r~~~~~~~~~~~~~l~v~GG~~ 356 (383)
......+..... |..++...-.|..+..+ |.....-.+-+++.+.++=-.|||||..
T Consensus 415 G~pD~RY~a~yPRtF~~r~n-----------v~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd 482 (670)
T 3ju4_A 415 GAPDDRYKASYPRTFYARLN-----------VNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGED 482 (670)
T ss_dssp TCCCCCSSCBCCEEEEEEEE-----------TTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBC
T ss_pred CCCcccccccCCceEEEEee-----------cccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcc
Confidence 112334444432 33445556778877643 5555566667777776666678999984
No 52
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=83.08 E-value=26 Score=31.51 Aligned_cols=68 Identities=7% Similarity=0.037 Sum_probs=35.0
Q ss_pred EECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEc-CCEEEEEcccCCCCCccccEE
Q 016774 158 CIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG-GNRTVLFGGRGVGYEVLNDVW 236 (383)
Q Consensus 158 ~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~-~~~i~v~GG~~~~~~~~~~v~ 236 (383)
...++..++.|+.+ ..+.++|+.+. +-...-. ... ....++.... +..+++.||.... ..+.
T Consensus 225 ~~~~~~~l~s~~~d------~~v~iwd~~~~----~~~~~~~-~~~--~~v~~~~~~p~~~~ll~~~~gs~d----~~i~ 287 (401)
T 4aez_A 225 WRSDGLQLASGGND------NVVQIWDARSS----IPKFTKT-NHN--AAVKAVAWCPWQSNLLATGGGTMD----KQIH 287 (401)
T ss_dssp ECTTSSEEEEEETT------SCEEEEETTCS----SEEEEEC-CCS--SCCCEEEECTTSTTEEEEECCTTT----CEEE
T ss_pred EcCCCCEEEEEeCC------CeEEEccCCCC----CccEEec-CCc--ceEEEEEECCCCCCEEEEecCCCC----CEEE
Confidence 33455677777742 35888998875 3222211 111 1112223322 3457777642111 2589
Q ss_pred EEEccc
Q 016774 237 FLDVYE 242 (383)
Q Consensus 237 ~~~~~~ 242 (383)
+||+.+
T Consensus 288 i~d~~~ 293 (401)
T 4aez_A 288 FWNAAT 293 (401)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 999887
No 53
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=82.81 E-value=25 Score=31.17 Aligned_cols=68 Identities=16% Similarity=0.214 Sum_probs=35.6
Q ss_pred EEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEc-CCEEEEEcCcCCCCC
Q 016774 211 LTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLIL-GGRVLIYGGEDSARR 289 (383)
Q Consensus 211 ~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~-~~~l~i~GG~~~~~~ 289 (383)
+....++..++.|+.+. .|.++|+.+ .+-...- . ....... ++.... ++.+++.||.++
T Consensus 145 v~~spdg~~l~sgs~dg------~v~iwd~~~--~~~~~~~-------~-~h~~~v~-~v~~s~~~~~~~~s~~~dg--- 204 (357)
T 4g56_B 145 LSVFSDGTQAVSGGKDF------SVKVWDLSQ--KAVLKSY-------N-AHSSEVN-CVAACPGKDTIFLSCGEDG--- 204 (357)
T ss_dssp EEECSSSSEEEEEETTS------CEEEEETTT--TEEEEEE-------C-CCSSCEE-EEEECTTCSSCEEEEETTS---
T ss_pred EEECCCCCEEEEEeCCC------eEEEEECCC--CcEEEEE-------c-CCCCCEE-EEEEccCCCceeeeeccCC---
Confidence 33344567778887642 488899887 4433221 1 1111111 222213 345777777754
Q ss_pred CCCcEEEEEcCC
Q 016774 290 RKDDFWVLDTKA 301 (383)
Q Consensus 290 ~~~~~~~~d~~~ 301 (383)
.+.++|+.+
T Consensus 205 ---~v~~wd~~~ 213 (357)
T 4g56_B 205 ---RILLWDTRK 213 (357)
T ss_dssp ---CEEECCTTS
T ss_pred ---ceEEEECCC
Confidence 367777763
No 54
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=82.47 E-value=25 Score=35.05 Aligned_cols=64 Identities=14% Similarity=0.222 Sum_probs=37.3
Q ss_pred cEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcC--CEEEEEcccCCCCCccccEEEEE
Q 016774 162 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGG--NRTVLFGGRGVGYEVLNDVWFLD 239 (383)
Q Consensus 162 ~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~--~~i~v~GG~~~~~~~~~~v~~~~ 239 (383)
+..++.|+.+ ..+..+|+.++ +|..+.... .......++....+ +.+++.|+.+. .|.++|
T Consensus 67 ~~~l~s~s~D------g~I~vwd~~~~----~~~~~~~~~-~h~~~V~~v~~sp~~~~~~l~sgs~dg------~I~vwd 129 (753)
T 3jro_A 67 GTILASCSYD------GKVLIWKEENG----RWSQIAVHA-VHSASVNSVQWAPHEYGPLLLVASSDG------KVSVVE 129 (753)
T ss_dssp CSEEEEEETT------SCEEEEEEETT----EEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTS------EEEEEE
T ss_pred CCEEEEEeCC------CeEEEEECCCC----ccccccccc-CCCCCeEEEEECCCCCCCEEEEEeCCC------cEEEEE
Confidence 4677777752 34888898887 776665111 11122223333333 56778887642 588888
Q ss_pred ccc
Q 016774 240 VYE 242 (383)
Q Consensus 240 ~~~ 242 (383)
+..
T Consensus 130 l~~ 132 (753)
T 3jro_A 130 FKE 132 (753)
T ss_dssp CCS
T ss_pred eec
Confidence 876
No 55
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=82.24 E-value=30 Score=31.58 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=52.8
Q ss_pred CcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEc
Q 016774 161 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV 240 (383)
Q Consensus 161 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~ 240 (383)
++..++.|+.+ ..+..+|+.+. +-...-. . . .....+.... +..++.|+.+. .|.+||+
T Consensus 288 ~~~~l~~~~~d------~~i~i~d~~~~----~~~~~~~-~-~--~~~v~~~~~~-~~~l~~~~~dg------~i~vwd~ 346 (445)
T 2ovr_B 288 DGIHVVSGSLD------TSIRVWDVETG----NCIHTLT-G-H--QSLTSGMELK-DNILVSGNADS------TVKIWDI 346 (445)
T ss_dssp CSSEEEEEETT------SCEEEEETTTC----CEEEEEC-C-C--CSCEEEEEEE-TTEEEEEETTS------CEEEEET
T ss_pred CCCEEEEEeCC------CeEEEEECCCC----CEEEEEc-C-C--cccEEEEEEe-CCEEEEEeCCC------eEEEEEC
Confidence 33566666642 34888998876 3222211 1 1 1112233443 55666776532 4889998
Q ss_pred ccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 241 YEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 241 ~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.+ .+-...- ...... ...-.++. .++.+++.|+.++ .+.++|+.+
T Consensus 347 ~~--~~~~~~~------~~~~~~-~~~v~~~~-~~~~~l~s~~~dg------~v~iwd~~~ 391 (445)
T 2ovr_B 347 KT--GQCLQTL------QGPNKH-QSAVTCLQ-FNKNFVITSSDDG------TVKLWDLKT 391 (445)
T ss_dssp TT--CCEEEEE------CSTTSC-SSCEEEEE-ECSSEEEEEETTS------EEEEEETTT
T ss_pred CC--CcEEEEE------ccCCCC-CCCEEEEE-ECCCEEEEEeCCC------eEEEEECCC
Confidence 76 4332221 010001 11112222 4677788887754 478888873
No 56
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=81.83 E-value=25 Score=30.46 Aligned_cols=122 Identities=4% Similarity=-0.040 Sum_probs=62.7
Q ss_pred eeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCcccc
Q 016774 155 AACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLND 234 (383)
Q Consensus 155 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 234 (383)
..+...++.+|+.+.. ...++++|++++ +...+.. .+ ...-++++.-.++.+|+..... ......
T Consensus 49 ~~~~~~~g~l~~~~~~------~~~i~~~d~~~~----~~~~~~~--~~-~~~~~~i~~~~dg~l~v~~~~~--~~~~~~ 113 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDVF------EGNIFKINPETK----EIKRPFV--SH-KANPAAIKIHKDGRLFVCYLGD--FKSTGG 113 (333)
T ss_dssp EEEECTTSCEEEEETT------TCEEEEECTTTC----CEEEEEE--CS-SSSEEEEEECTTSCEEEEECTT--SSSCCE
T ss_pred CcEECCCCCEEEEECC------CCEEEEEeCCCC----cEEEEee--CC-CCCcceEEECCCCcEEEEeCCC--CCCCce
Confidence 3444456678887643 246899999887 6665531 11 1222334444456777765332 011246
Q ss_pred EEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 235 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 235 v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
|+++|+++ .....+. ....+..+. .......++.+|+.............++.+|.+
T Consensus 114 i~~~d~~~--~~~~~~~------~~~~~~~~~-~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~ 170 (333)
T 2dg1_A 114 IFAATENG--DNLQDII------EDLSTAYCI-DDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD 170 (333)
T ss_dssp EEEECTTS--CSCEEEE------CSSSSCCCE-EEEEECTTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred EEEEeCCC--CEEEEEE------ccCccCCcc-cceEECCCCCEEEEeccccccCCCceEEEEeCC
Confidence 99999987 6655331 011111122 223332567788754321111123468888876
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=80.41 E-value=27 Score=29.91 Aligned_cols=108 Identities=16% Similarity=0.042 Sum_probs=57.9
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccE
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDV 235 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v 235 (383)
.+...++..++.|+.+ ..+..+|+.+. +-.... ..+ ....++....++.+++.|+.+. .+
T Consensus 189 ~~~~~~~~~l~~~~~d------g~i~~~d~~~~----~~~~~~--~~~--~~v~~~~~s~~~~~l~~~~~~~------~i 248 (337)
T 1gxr_A 189 IDISNDGTKLWTGGLD------NTVRSWDLREG----RQLQQH--DFT--SQIFSLGYCPTGEWLAVGMESS------NV 248 (337)
T ss_dssp EEECTTSSEEEEEETT------SEEEEEETTTT----EEEEEE--ECS--SCEEEEEECTTSSEEEEEETTS------CE
T ss_pred EEECCCCCEEEEEecC------CcEEEEECCCC----ceEeee--cCC--CceEEEEECCCCCEEEEEcCCC------cE
Confidence 3334455667776642 45889998876 322221 111 1122333334566777776532 48
Q ss_pred EEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 236 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 236 ~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.+||+.+ ..-..+. ....+ . .++....++.+++.|+.++ .+.++|+.+
T Consensus 249 ~~~~~~~--~~~~~~~--------~~~~~-v-~~~~~~~~~~~l~~~~~dg------~i~~~~~~~ 296 (337)
T 1gxr_A 249 EVLHVNK--PDKYQLH--------LHESC-V-LSLKFAYCGKWFVSTGKDN------LLNAWRTPY 296 (337)
T ss_dssp EEEETTS--SCEEEEC--------CCSSC-E-EEEEECTTSSEEEEEETTS------EEEEEETTT
T ss_pred EEEECCC--CCeEEEc--------CCccc-e-eEEEECCCCCEEEEecCCC------cEEEEECCC
Confidence 8999987 4433331 11111 1 2223225677778877654 478888873
No 58
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=80.34 E-value=31 Score=30.53 Aligned_cols=102 Identities=11% Similarity=0.134 Sum_probs=51.3
Q ss_pred cceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCC
Q 016774 178 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNI 257 (383)
Q Consensus 178 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~ 257 (383)
..+|.+|+++. .+..+.. ..+ .........-.+++.+++...... .....++++|+.+ .+...+.
T Consensus 216 ~~l~~~d~~~~----~~~~l~~-~~~-~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~--g~~~~l~------ 280 (396)
T 3c5m_A 216 ARMWLVNEDGS----NVRKIKE-HAE-GESCTHEFWIPDGSAMAYVSYFKG-QTDRVIYKANPET--LENEEVM------ 280 (396)
T ss_dssp CCCEEEETTSC----CCEESSC-CCT-TEEEEEEEECTTSSCEEEEEEETT-TCCEEEEEECTTT--CCEEEEE------
T ss_pred ceEEEEECCCC----ceeEeec-cCC-CccccceEECCCCCEEEEEecCCC-CccceEEEEECCC--CCeEEee------
Confidence 57999999877 6666652 111 111111222234444444433211 1113499999988 6666653
Q ss_pred CCCCCCCceeeEEEEEc-CCEEEEEcCcCCC----------CCCCCcEEEEEcC
Q 016774 258 PAGFSLPRVGHSATLIL-GGRVLIYGGEDSA----------RRRKDDFWVLDTK 300 (383)
Q Consensus 258 ~~~~p~~r~~~~~~~~~-~~~l~i~GG~~~~----------~~~~~~~~~~d~~ 300 (383)
..+ ... ..... +++++++.+.... .....+++.+|+.
T Consensus 281 --~~~--~~~--~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 281 --VMP--PCS--HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp --ECC--SEE--EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred --eCC--CCC--CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 112 111 22224 7777766543210 0123579999987
No 59
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=80.16 E-value=35 Score=31.07 Aligned_cols=140 Identities=11% Similarity=0.086 Sum_probs=71.8
Q ss_pred cceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcE-EEEEcccCCCCCcccceEEEeccCCcccCceEEc
Q 016774 119 NDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRK-MVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQL 197 (383)
Q Consensus 119 ~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~ 197 (383)
..++++|+ .+.+...+... +....+.+...+++ +++.+..+ -...++.+|+.++ +..++
T Consensus 203 ~~i~~~d~-------~tg~~~~l~~~-----~~~~~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~----~~~~l 262 (415)
T 2hqs_A 203 SALVIQTL-------ANGAVRQVASF-----PRHNGAPAFSPDGSKLAFALSKT----GSLNLYVMDLASG----QIRQV 262 (415)
T ss_dssp CEEEEEET-------TTCCEEEEECC-----SSCEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTC----CEEEC
T ss_pred cEEEEEEC-------CCCcEEEeecC-----CCcccCEEEcCCCCEEEEEEecC----CCceEEEEECCCC----CEEeC
Confidence 46889998 45555554321 11222334444445 44444321 1246999999887 66555
Q ss_pred ccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCE
Q 016774 198 VTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGR 277 (383)
Q Consensus 198 ~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~ 277 (383)
. ..+ ....+...-.+++.+++++.... ...+|.+|+.+ ..-..+. . ......+.....+++
T Consensus 263 ~--~~~--~~~~~~~~spdg~~l~~~s~~~g---~~~i~~~d~~~--~~~~~l~-------~---~~~~~~~~~~spdG~ 323 (415)
T 2hqs_A 263 T--DGR--SNNTEPTWFPDSQNLAFTSDQAG---RPQVYKVNING--GAPQRIT-------W---EGSQNQDADVSSDGK 323 (415)
T ss_dssp C--CCS--SCEEEEEECTTSSEEEEEECTTS---SCEEEEEETTS--SCCEECC-------C---SSSEEEEEEECTTSS
T ss_pred c--CCC--CcccceEECCCCCEEEEEECCCC---CcEEEEEECCC--CCEEEEe-------c---CCCcccCeEECCCCC
Confidence 4 111 11122222334555555543211 23699999988 6555542 1 112222233225666
Q ss_pred EEEEcCcCCCCCCCCcEEEEEcC
Q 016774 278 VLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 278 l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
.+++++.... ...++++|++
T Consensus 324 ~l~~~~~~~g---~~~i~~~d~~ 343 (415)
T 2hqs_A 324 FMVMVSSNGG---QQHIAKQDLA 343 (415)
T ss_dssp EEEEEEECSS---CEEEEEEETT
T ss_pred EEEEEECcCC---ceEEEEEECC
Confidence 6666654321 3468899987
No 60
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=79.55 E-value=31 Score=30.12 Aligned_cols=109 Identities=14% Similarity=0.045 Sum_probs=57.6
Q ss_pred CCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEE-cC--CEEEEEcccCCCCCccccEE
Q 016774 160 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRI-GG--NRTVLFGGRGVGYEVLNDVW 236 (383)
Q Consensus 160 ~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~-~~--~~i~v~GG~~~~~~~~~~v~ 236 (383)
.++..++.|+.+ ..+.++|+... .+..+.. .......-.++.+ .+ +.+++.|+.+. .|.
T Consensus 21 ~~~~~l~~~~~d------g~i~iw~~~~~----~~~~~~~--~~~h~~~v~~~~~~~~~~~~~l~s~~~dg------~v~ 82 (379)
T 3jrp_A 21 YYGKRLATCSSD------KTIKIFEVEGE----THKLIDT--LTGHEGPVWRVDWAHPKFGTILASCSYDG------KVL 82 (379)
T ss_dssp SSSSEEEEEETT------SCEEEEEEETT----EEEEEEE--ECCCSSCEEEEEECCGGGCSEEEEEETTS------CEE
T ss_pred CCCCEEEEEECC------CcEEEEecCCC----cceeeeE--ecCCCCcEEEEEeCCCCCCCEEEEeccCC------EEE
Confidence 445667777642 34777887755 5554431 1111111223333 22 56777777642 488
Q ss_pred EEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcC--CEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 237 FLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILG--GRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 237 ~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~--~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
++|+.+ .+|..+.. ..... ..-.++....+ +.+++.|+.++ .+.++|+..
T Consensus 83 iwd~~~--~~~~~~~~-----~~~~~--~~v~~~~~~~~~~~~~l~~~~~d~------~i~v~d~~~ 134 (379)
T 3jrp_A 83 IWKEEN--GRWSQIAV-----HAVHS--ASVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKE 134 (379)
T ss_dssp EEEEET--TEEEEEEE-----ECCCS--SCEEEEEECCGGGCSEEEEEETTS------EEEEEECCT
T ss_pred EEEcCC--CceeEeee-----ecCCC--cceEEEEeCCCCCCCEEEEecCCC------cEEEEecCC
Confidence 999988 77766631 01111 11122222233 56788887754 477888764
No 61
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=78.96 E-value=27 Score=29.07 Aligned_cols=104 Identities=11% Similarity=-0.070 Sum_probs=56.2
Q ss_pred ccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccC-CcccCceEE
Q 016774 118 HNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSE-NFCFGSWQQ 196 (383)
Q Consensus 118 ~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~-~~~~~~W~~ 196 (383)
...++++|+ .+.+...+... ...-.+.....+++.+++++. ..++++|+.+ . +...
T Consensus 21 ~~~i~~~d~-------~~~~~~~~~~~-----~~~v~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~----~~~~ 77 (297)
T 2ojh_A 21 RSSIEIFNI-------RTRKMRVVWQT-----PELFEAPNWSPDGKYLLLNSE-------GLLYRLSLAGDP----SPEK 77 (297)
T ss_dssp CEEEEEEET-------TTTEEEEEEEE-----SSCCEEEEECTTSSEEEEEET-------TEEEEEESSSCC----SCEE
T ss_pred ceeEEEEeC-------CCCceeeeccC-----CcceEeeEECCCCCEEEEEcC-------CeEEEEeCCCCC----CceE
Confidence 456888898 35554443321 112233444455566666541 3699999988 6 5555
Q ss_pred cccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEe
Q 016774 197 LVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 197 ~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i 250 (383)
+. .........++..-.+++.+++++... .....+|.+++.+ ..-..+
T Consensus 78 ~~--~~~~~~~~~~~~~spdg~~l~~~~~~~--~~~~~l~~~~~~~--~~~~~~ 125 (297)
T 2ojh_A 78 VD--TGFATICNNDHGISPDGALYAISDKVE--FGKSAIYLLPSTG--GTPRLM 125 (297)
T ss_dssp CC--CTTCCCBCSCCEECTTSSEEEEEECTT--TSSCEEEEEETTC--CCCEEC
T ss_pred ec--cccccccccceEECCCCCEEEEEEeCC--CCcceEEEEECCC--CceEEe
Confidence 54 122112222233334566666666421 1234689998877 665555
No 62
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=78.94 E-value=49 Score=32.02 Aligned_cols=153 Identities=8% Similarity=-0.069 Sum_probs=73.8
Q ss_pred ccceeeeecccccCCccc------ccEEEcc-CCCCCCCccccceeEEECCcEEEEEcccCCCCC--cccceEEEecc-C
Q 016774 118 HNDTWIGQIACHENLGIT------LSWRLLD-VGSIAPPARGAHAACCIDNRKMVIHAGIGLYGL--RLGDTWVLELS-E 187 (383)
Q Consensus 118 ~~~~~~~d~~~~~~~~~~------~~W~~~~-~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~--~~~~~~~~d~~-~ 187 (383)
...++++|+ .+ .....+. .. ...........+++.+++........ ...+++++|++ +
T Consensus 160 ~~~i~~~~~-------~~~~~~~~~~~~~l~~~~-----~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~ 227 (662)
T 3azo_A 160 RRFLAAVPL-------DGSAAADRSAVRELSDDA-----HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTED 227 (662)
T ss_dssp EEEEEEEET-------TSTTTTCGGGSEESSCSC-----SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTT
T ss_pred eeEEEEEEC-------CCCccccCCceeEEEecC-----CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCC
Confidence 357888998 34 4555553 21 11222333444555555544322211 13579999998 4
Q ss_pred CcccCceEEcc-cCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCce
Q 016774 188 NFCFGSWQQLV-THPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRV 266 (383)
Q Consensus 188 ~~~~~~W~~~~-~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~ 266 (383)
+ ++.+.. ..... ...........++++++.+..+. ...+|.+|+.+ .+++.+...... ...|.-..
T Consensus 228 g----~~~~~~~l~~~~-~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~--~~~~~l~~~~~~--~~~p~w~~ 294 (662)
T 3azo_A 228 G----RFADTRTLLGGP-EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPAT--GAATQLCRREEE--FAGPLWTP 294 (662)
T ss_dssp S----CEEEEEEEEEET-TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTT--CCEEESSCCSSB--SSCCCCST
T ss_pred C----cccccEEeCCCC-CceEcceEECCCCeEEEEECCCC----CeEEEEEECCC--Cceeeccccccc--ccCccccc
Confidence 4 333332 00100 11112233333566666655421 23699999888 888887411000 00010000
Q ss_pred -eeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 267 -GHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 267 -~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
........++++++.+.. + ...+|.+|++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~-~----~~~l~~~d~~ 324 (662)
T 3azo_A 295 GMRWFAPLANGLIAVVHGK-G----AAVLGILDPE 324 (662)
T ss_dssp TCCSEEECTTSCEEEEEBS-S----SCEEEEEETT
T ss_pred cCceEeEeCCCEEEEEEEc-C----ccEEEEEECC
Confidence 011222246777776654 3 4578888986
No 63
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=78.83 E-value=8.5 Score=34.20 Aligned_cols=113 Identities=9% Similarity=0.057 Sum_probs=54.1
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCC-CCCCceEEEEcCCEEEEEcccCCCCCcccc
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPP-ARSGHSLTRIGGNRTVLFGGRGVGYEVLND 234 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~-~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 234 (383)
++...++.+++.|+.+ ..+.++|+.++ .|..+. .... .....++....++.+++.|+.+. .
T Consensus 17 ~~~s~~g~~l~~~~~d------~~i~iw~~~~~----~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~s~d~------~ 78 (377)
T 3dwl_C 17 HAFNSQRTEFVTTTAT------NQVELYEQDGN----GWKHAR--TFSDHDKIVTCVDWAPKSNRIVTCSQDR------N 78 (377)
T ss_dssp CEECSSSSEEECCCSS------SCBCEEEEETT----EEEECC--CBCCCSSCEEEEEECTTTCCEEEEETTS------S
T ss_pred EEECCCCCEEEEecCC------CEEEEEEccCC----ceEEEE--EEecCCceEEEEEEeCCCCEEEEEeCCC------e
Confidence 3334455677777642 34777888876 776665 1211 11122333334466777777642 4
Q ss_pred EEEEEcccCccc-eEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 235 VWFLDVYEGFFK-WVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 235 v~~~~~~~~~~~-W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
|.++|+.+ .. |.... .... ....-.++....++.+++.|+.++ .+.++|+.+
T Consensus 79 v~vwd~~~--~~~~~~~~-----~~~~--~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~ 131 (377)
T 3dwl_C 79 AYVYEKRP--DGTWKQTL-----VLLR--LNRAATFVRWSPNEDKFAVGSGAR------VISVCYFEQ 131 (377)
T ss_dssp EEEC--------CCCCEE-----ECCC--CSSCEEEEECCTTSSCCEEEESSS------CEEECCC--
T ss_pred EEEEEcCC--CCceeeee-----Eecc--cCCceEEEEECCCCCEEEEEecCC------eEEEEEECC
Confidence 88888887 54 43331 0011 111112222224677777877754 366777663
No 64
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=78.59 E-value=31 Score=29.61 Aligned_cols=53 Identities=9% Similarity=0.055 Sum_probs=24.7
Q ss_pred cceEEEecc--CCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcc
Q 016774 178 GDTWVLELS--ENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY 241 (383)
Q Consensus 178 ~~~~~~d~~--~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~ 241 (383)
..+.+|+++ ++ +++.+.....+. .-..++.-.+++.+++++... ..+.+|++.
T Consensus 60 ~~v~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~ 114 (343)
T 1ri6_A 60 FRVLAYRIAPDDG----ALTFAAESALPG--SLTHISTDHQGQFVFVGSYNA-----GNVSVTRLE 114 (343)
T ss_dssp TEEEEEEECTTTC----CEEEEEEEECSS--CCSEEEECTTSSEEEEEETTT-----TEEEEEEEE
T ss_pred CeEEEEEecCCCC----ceeeccccccCC--CCcEEEEcCCCCEEEEEecCC-----CeEEEEECC
Confidence 356666665 65 666554111111 122333333454444443321 247888873
No 65
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=78.36 E-value=58 Score=32.58 Aligned_cols=135 Identities=6% Similarity=-0.072 Sum_probs=71.5
Q ss_pred ceeeeecccccCCcccccEEEccCCCCCCCcc---ccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEE
Q 016774 120 DTWIGQIACHENLGITLSWRLLDVGSIAPPAR---GAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQ 196 (383)
Q Consensus 120 ~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r---~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~ 196 (383)
.+++||. .+.+|+...... .+... .-.+.+...++.+++... .-+++||++++ ++ .
T Consensus 472 Gl~~~~~-------~~~~~~~~~~~~-~~~~~~~~~i~~i~~d~~g~lWigt~--------~Gl~~~~~~~~----~~-~ 530 (795)
T 4a2l_A 472 ALVRFNP-------EQRSFTTIEKEK-DGTPVVSKQITTLFRDSHKRLWIGGE--------EGLSVFKQEGL----DI-Q 530 (795)
T ss_dssp CEEEEET-------TTTEEEECCBCT-TCCBCCCCCEEEEEECTTCCEEEEES--------SCEEEEEEETT----EE-E
T ss_pred ceeEEeC-------CCCeEEEccccc-cccccCCceEEEEEECCCCCEEEEeC--------CceEEEeCCCC----eE-E
Confidence 3888998 577887765321 11111 112223334557777432 24899999887 66 3
Q ss_pred ccc--C--CCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEE
Q 016774 197 LVT--H--PSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATL 272 (383)
Q Consensus 197 ~~~--~--~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~ 272 (383)
... . ..+. ....++....++.|++.... .+++||..+ .+++... ....+|.... .+++.
T Consensus 531 ~~~~~~~~~l~~-~~i~~i~~d~~g~lWigT~~--------Gl~~~d~~~--~~~~~~~-----~~~gl~~~~i-~~i~~ 593 (795)
T 4a2l_A 531 KASILPVSNVTK-LFTNCIYEASNGIIWVGTRE--------GFYCFNEKD--KQIKRYN-----TTNGLPNNVV-YGILE 593 (795)
T ss_dssp ECCCSCSCGGGG-SCEEEEEECTTSCEEEEESS--------CEEEEETTT--TEEEEEC-----GGGTCSCSCE-EEEEE
T ss_pred EecCCCCCCCCC-CeeEEEEECCCCCEEEEeCC--------CceeECCCC--CcEEEeC-----CCCCCchhhe-EEEEE
Confidence 321 0 1111 11223333344667764321 389999988 8887763 2233454433 23333
Q ss_pred EcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 273 ILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 273 ~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
..++.|++-+. +.+.+||++
T Consensus 594 d~~g~lWi~t~--------~Gl~~~~~~ 613 (795)
T 4a2l_A 594 DSFGRLWLSTN--------RGISCFNPE 613 (795)
T ss_dssp CTTSCEEEEET--------TEEEEEETT
T ss_pred CCCCCEEEEcC--------CceEEEcCC
Confidence 24577777652 237788877
No 66
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=77.90 E-value=34 Score=29.63 Aligned_cols=68 Identities=10% Similarity=0.090 Sum_probs=33.2
Q ss_pred eEEECC-cEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcC-CEEEEEcccCCCCCccc
Q 016774 156 ACCIDN-RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGG-NRTVLFGGRGVGYEVLN 233 (383)
Q Consensus 156 ~~~~~~-~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~ 233 (383)
.+...+ +.+|+.+.. . -..++++|+.+. +-...- +.. ....+.+....+ +.+|+... + +
T Consensus 146 ~~~s~dg~~l~~~~~~-~----~~~i~~~d~~~~----~~~~~~--~~~-~~~~~~~~~s~dg~~l~~~~~-~------~ 206 (353)
T 3vgz_A 146 LVADDATNTVYISGIG-K----ESVIWVVDGGNI----KLKTAI--QNT-GKMSTGLALDSEGKRLYTTNA-D------G 206 (353)
T ss_dssp EEEETTTTEEEEEEES-S----SCEEEEEETTTT----EEEEEE--CCC-CTTCCCCEEETTTTEEEEECT-T------S
T ss_pred EEECCCCCEEEEEecC-C----CceEEEEcCCCC----ceEEEe--cCC-CCccceEEECCCCCEEEEEcC-C------C
Confidence 444433 457766522 1 245899999876 322221 101 111122233323 44555433 1 3
Q ss_pred cEEEEEccc
Q 016774 234 DVWFLDVYE 242 (383)
Q Consensus 234 ~v~~~~~~~ 242 (383)
.++++|+.+
T Consensus 207 ~i~~~d~~~ 215 (353)
T 3vgz_A 207 ELITIDTAD 215 (353)
T ss_dssp EEEEEETTT
T ss_pred eEEEEECCC
Confidence 688999887
No 67
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=77.35 E-value=42 Score=30.45 Aligned_cols=148 Identities=11% Similarity=0.113 Sum_probs=71.5
Q ss_pred EEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcc
Q 016774 98 CVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRL 177 (383)
Q Consensus 98 ~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~ 177 (383)
+...+++.++.|+.+. .+.++|+ .+.+-..... + . ...-.++.. ++.+++.|+.+
T Consensus 138 ~~~~d~~~l~~g~~dg------~i~iwd~-------~~~~~~~~~~-~---h-~~~v~~l~~-~~~~l~sg~~d------ 192 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDN------TIKIWDK-------NTLECKRILT-G---H-TGSVLCLQY-DERVIITGSSD------ 192 (435)
T ss_dssp EEECCSSEEEEEESSS------CEEEEES-------SSCCEEEEEC-C---C-SSCEEEEEC-CSSEEEEEETT------
T ss_pred EEEECCCEEEEEeCCC------eEEEEeC-------CCCeEEEEEc-C---C-CCcEEEEEE-CCCEEEEEcCC------
Confidence 3344566777777532 4778887 2333322211 1 0 011122223 44677777642
Q ss_pred cceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCC
Q 016774 178 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNI 257 (383)
Q Consensus 178 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~ 257 (383)
..+.++|+.++ +-...-. . ....-.++... +..++.|+.+. .|.++|+.+ ..-..... .
T Consensus 193 g~i~vwd~~~~----~~~~~~~-~---h~~~v~~l~~~-~~~l~s~s~dg------~i~vwd~~~--~~~~~~~~----~ 251 (435)
T 1p22_A 193 STVRVWDVNTG----EMLNTLI-H---HCEAVLHLRFN-NGMMVTCSKDR------SIAVWDMAS--PTDITLRR----V 251 (435)
T ss_dssp SCEEEEESSSC----CEEEEEC-C---CCSCEEEEECC-TTEEEEEETTS------CEEEEECSS--SSCCEEEE----E
T ss_pred CeEEEEECCCC----cEEEEEc-C---CCCcEEEEEEc-CCEEEEeeCCC------cEEEEeCCC--CCCceeee----E
Confidence 34888898876 4322221 1 11122334443 55677777642 488889876 33211000 0
Q ss_pred CCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 258 PAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 258 ~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
..... ....++. .++..++.|+.++ .+.++|+.+
T Consensus 252 ~~~~~---~~v~~~~-~~~~~l~s~~~dg------~i~vwd~~~ 285 (435)
T 1p22_A 252 LVGHR---AAVNVVD-FDDKYIVSASGDR------TIKVWNTST 285 (435)
T ss_dssp ECCCS---SCEEEEE-EETTEEEEEETTS------EEEEEETTT
T ss_pred ecCCC---CcEEEEE-eCCCEEEEEeCCC------eEEEEECCc
Confidence 00111 1112222 3666777776654 477888763
No 68
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=76.87 E-value=38 Score=29.68 Aligned_cols=153 Identities=13% Similarity=0.087 Sum_probs=70.4
Q ss_pred CEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEE
Q 016774 103 DCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWV 182 (383)
Q Consensus 103 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 182 (383)
+++++.||.+. .+.++|+ .+..|....... ......-.+.+...++..++.|+.+ ..+.+
T Consensus 28 g~~las~~~D~------~i~iw~~-------~~~~~~~~~~~~-~~h~~~v~~~~~sp~g~~l~s~s~D------~~v~i 87 (345)
T 3fm0_A 28 GTLLASCGGDR------RIRIWGT-------EGDSWICKSVLS-EGHQRTVRKVAWSPCGNYLASASFD------ATTCI 87 (345)
T ss_dssp SSCEEEEETTS------CEEEEEE-------ETTEEEEEEEEC-SSCSSCEEEEEECTTSSEEEEEETT------SCEEE
T ss_pred CCEEEEEcCCC------eEEEEEc-------CCCcceeeeeec-cccCCcEEEEEECCCCCEEEEEECC------CcEEE
Confidence 44666776532 3667777 355554321100 0011112233333455677777753 23566
Q ss_pred EeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCC
Q 016774 183 LELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFS 262 (383)
Q Consensus 183 ~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p 262 (383)
+|..++ .+..+..... ......++....++.+++.|+.+. .|.++|+... ..+..+.. .....
T Consensus 88 w~~~~~----~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~s~D~------~v~iwd~~~~-~~~~~~~~-----~~~h~ 150 (345)
T 3fm0_A 88 WKKNQD----DFECVTTLEG-HENEVKSVAWAPSGNLLATCSRDK------SVWVWEVDEE-DEYECVSV-----LNSHT 150 (345)
T ss_dssp EEECCC-----EEEEEEECC-CSSCEEEEEECTTSSEEEEEETTS------CEEEEEECTT-SCEEEEEE-----ECCCC
T ss_pred EEccCC----CeEEEEEccC-CCCCceEEEEeCCCCEEEEEECCC------eEEEEECCCC-CCeEEEEE-----ecCcC
Confidence 666665 5544431010 111112333334567788887642 4788888651 12322210 01111
Q ss_pred CCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 263 LPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 263 ~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
.. . .++....++.+++.|+.++ .+.++|..
T Consensus 151 ~~-v-~~~~~~p~~~~l~s~s~d~------~i~~w~~~ 180 (345)
T 3fm0_A 151 QD-V-KHVVWHPSQELLASASYDD------TVKLYREE 180 (345)
T ss_dssp SC-E-EEEEECSSSSCEEEEETTS------CEEEEEEE
T ss_pred CC-e-EEEEECCCCCEEEEEeCCC------cEEEEEec
Confidence 11 1 1222225667778887765 35666665
No 69
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=75.82 E-value=38 Score=29.17 Aligned_cols=50 Identities=18% Similarity=0.203 Sum_probs=25.9
Q ss_pred cceEEEeccCCcccCceEE-cccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEccc
Q 016774 178 GDTWVLELSENFCFGSWQQ-LVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE 242 (383)
Q Consensus 178 ~~~~~~d~~~~~~~~~W~~-~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~ 242 (383)
..++++|+.++ +-.+ +.....| +...++..-.++++|+.++ +++++|+.+
T Consensus 125 ~~i~~~d~~~~----~~~~~~~~~~~~--~~~~~~~~s~dg~l~~~~~---------~i~~~d~~~ 175 (349)
T 1jmx_B 125 PRLEVFSTADG----LEAKPVRTFPMP--RQVYLMRAADDGSLYVAGP---------DIYKMDVKT 175 (349)
T ss_dssp CEEEEEEGGGG----GGBCCSEEEECC--SSCCCEEECTTSCEEEESS---------SEEEECTTT
T ss_pred CeEEEEECCCc----cccceeeeccCC--CcccceeECCCCcEEEccC---------cEEEEeCCC
Confidence 57899998874 2111 1111112 2233344444566666322 388888876
No 70
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=75.56 E-value=67 Score=31.83 Aligned_cols=106 Identities=11% Similarity=0.113 Sum_probs=52.8
Q ss_pred CcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEc--CCEEEEEcccCCCCCccccEEEE
Q 016774 161 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG--GNRTVLFGGRGVGYEVLNDVWFL 238 (383)
Q Consensus 161 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~--~~~i~v~GG~~~~~~~~~~v~~~ 238 (383)
++..++.|+.+ ..+..+|+.+.. ....... .. .....++.... ++.+++.|+.+. .|.++
T Consensus 152 ~~~~l~~~~~d------g~v~vwd~~~~~--~~~~~~~--~~--~~~v~~~~~~~~~~~~~l~~~~~dg------~i~~~ 213 (814)
T 3mkq_A 152 DPSTFASGCLD------RTVKVWSLGQST--PNFTLTT--GQ--ERGVNYVDYYPLPDKPYMITASDDL------TIKIW 213 (814)
T ss_dssp EEEEEEEEETT------SEEEEEETTCSS--CSEEEEC--CC--TTCCCEEEECCSTTCCEEEEECTTS------EEEEE
T ss_pred CCCEEEEEeCC------CeEEEEECCCCc--ceeEEec--CC--CCCEEEEEEEECCCCCEEEEEeCCC------EEEEE
Confidence 45677777642 358888886651 1121111 11 11122233322 466777777632 58889
Q ss_pred EcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 239 DVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 239 ~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
|+.+ .+-...- .. ..... .++....++.+++.|+.++ .+.++|+.+
T Consensus 214 d~~~--~~~~~~~-------~~-~~~~v-~~~~~~~~~~~l~~~~~dg------~v~vwd~~~ 259 (814)
T 3mkq_A 214 DYQT--KSCVATL-------EG-HMSNV-SFAVFHPTLPIIISGSEDG------TLKIWNSST 259 (814)
T ss_dssp ETTT--TEEEEEE-------EC-CSSCE-EEEEECSSSSEEEEEETTS------CEEEEETTT
T ss_pred ECCC--CcEEEEE-------cC-CCCCE-EEEEEcCCCCEEEEEeCCC------eEEEEECCC
Confidence 9876 3322210 01 11111 1222225667788887654 367777763
No 71
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=75.27 E-value=40 Score=29.14 Aligned_cols=147 Identities=7% Similarity=0.013 Sum_probs=68.6
Q ss_pred CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECC-cEEEEEcccCCCCCcccce
Q 016774 102 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDN-RKMVIHAGIGLYGLRLGDT 180 (383)
Q Consensus 102 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~~~ 180 (383)
++.+|+.+... ...++++|+ .+.+-...... .....+..+...+ +.+|+... -+.+
T Consensus 152 g~~l~~~~~~~-----~~~i~~~d~-------~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~-------~~~i 208 (353)
T 3vgz_A 152 TNTVYISGIGK-----ESVIWVVDG-------GNIKLKTAIQN----TGKMSTGLALDSEGKRLYTTNA-------DGEL 208 (353)
T ss_dssp TTEEEEEEESS-----SCEEEEEET-------TTTEEEEEECC----CCTTCCCCEEETTTTEEEEECT-------TSEE
T ss_pred CCEEEEEecCC-----CceEEEEcC-------CCCceEEEecC----CCCccceEEECCCCCEEEEEcC-------CCeE
Confidence 45577766321 135888998 34333222110 1111233344433 45666532 2468
Q ss_pred EEEeccCCcccCceEEc-ccCCCCCCCCCceEEEEcC-CEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCC
Q 016774 181 WVLELSENFCFGSWQQL-VTHPSPPARSGHSLTRIGG-NRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIP 258 (383)
Q Consensus 181 ~~~d~~~~~~~~~W~~~-~~~~~p~~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~ 258 (383)
+++|+.+. +-... .............++...+ +.+|+.... .+.++++|+.+ .+....-
T Consensus 209 ~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~--~~~~~~~------- 269 (353)
T 3vgz_A 209 ITIDTADN----KILSRKKLLDDGKEHFFINISLDTARQRAFITDSK------AAEVLVVDTRN--GNILAKV------- 269 (353)
T ss_dssp EEEETTTT----EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS------SSEEEEEETTT--CCEEEEE-------
T ss_pred EEEECCCC----eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC------CCEEEEEECCC--CcEEEEE-------
Confidence 89998876 32222 1111111111122333323 446555432 23699999987 5543321
Q ss_pred CCCCCCceeeEEEEEcCC-EEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 259 AGFSLPRVGHSATLILGG-RVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 259 ~~~p~~r~~~~~~~~~~~-~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
..+.+ .+ .....++ .+|+.+..+ +.+.++|+.
T Consensus 270 -~~~~~--~~-~~~s~dg~~l~v~~~~~------~~v~~~d~~ 302 (353)
T 3vgz_A 270 -AAPES--LA-VLFNPARNEAYVTHRQA------GKVSVIDAK 302 (353)
T ss_dssp -ECSSC--CC-EEEETTTTEEEEEETTT------TEEEEEETT
T ss_pred -EcCCC--ce-EEECCCCCEEEEEECCC------CeEEEEECC
Confidence 01222 12 2222444 577765443 358899987
No 72
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=74.52 E-value=71 Score=31.69 Aligned_cols=110 Identities=12% Similarity=-0.015 Sum_probs=59.0
Q ss_pred CEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEE
Q 016774 103 DCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWV 182 (383)
Q Consensus 103 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 182 (383)
+.|++.||.. +.+++||. .+.+++.+.... .+......+.+...++.|++.. . .-+.+
T Consensus 483 g~lWi~~~t~------~Gl~~~d~-------~~~~~~~~~~~~-~~~~~~~~~i~~d~~g~lWigt-~-------~Gl~~ 540 (758)
T 3ott_A 483 GNVWVLLYNN------KGIDKINP-------RTREVTKLFADE-LTGEKSPNYLLCDEDGLLWVGF-H-------GGVMR 540 (758)
T ss_dssp SCEEEEETTC------SSEEEEET-------TTTEEEEECTTT-SCGGGCEEEEEECTTSCEEEEE-T-------TEEEE
T ss_pred CCEEEEccCC------CCcEEEeC-------CCCceEEecCCC-cCCCcccceEEECCCCCEEEEe-c-------CceEE
Confidence 4588766643 24888998 477777664321 1111122233333456788642 1 23899
Q ss_pred EeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEe
Q 016774 183 LELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 183 ~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i 250 (383)
||++++ +++......+|. ....+++. .++.|++.... .+.+||+.+ .+....
T Consensus 541 ~~~~~~----~~~~~~~~gl~~-~~i~~i~~-~~g~lWi~t~~--------Gl~~~~~~~--~~~~~~ 592 (758)
T 3ott_A 541 INPKDE----SQQSISFGSFSN-NEILSMTC-VKNSIWVSTTN--------GLWIIDRKT--MDARQQ 592 (758)
T ss_dssp ECC--C----CCCBCCCCC----CCEEEEEE-ETTEEEEEESS--------CEEEEETTT--CCEEEC
T ss_pred EecCCC----ceEEecccCCCc-cceEEEEE-CCCCEEEECCC--------CeEEEcCCC--ceeEEe
Confidence 999887 665443223332 22333333 36778776532 389999998 776654
No 73
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=74.43 E-value=68 Score=31.44 Aligned_cols=104 Identities=11% Similarity=0.045 Sum_probs=50.6
Q ss_pred ceEEEeccC-CcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCC
Q 016774 179 DTWVLELSE-NFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNI 257 (383)
Q Consensus 179 ~~~~~d~~~-~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~ 257 (383)
.++.+|+.+ + +-..+... .........+.. .+++.++++.... .....+|+.+|+.+ .+...+.....
T Consensus 264 ~l~~~d~~~~~----~~~~~~~~-~~~~~~~~~~~~-pDg~~l~~~~~~~-~~~~~~i~~~d~~~--g~~~~~~~~~~-- 332 (741)
T 2ecf_A 264 KLGVISPAEQA----QTQWIDLG-KEQDIYLARVNW-RDPQHLSFQRQSR-DQKKLDLVEVTLAS--NQQRVLAHETS-- 332 (741)
T ss_dssp EEEEECSSTTC----CCEEECCC-SCSSEEEEEEEE-EETTEEEEEEEET-TSSEEEEEEEETTT--CCEEEEEEEEC--
T ss_pred EEEEEECCCCC----ceEEecCC-CCcceEEEEEEe-CCCCEEEEEEecc-cCCeEEEEEEECCC--CceEEEEEcCC--
Confidence 788889887 6 54444311 011111222233 4455555544321 12345799999988 76666531000
Q ss_pred CCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 258 PAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 258 ~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
... ...... .....++++++.+..++ ...+|.+|++
T Consensus 333 -~~~-~~~~~~-~~~spdg~~~~~~~~~g----~~~l~~~~~~ 368 (741)
T 2ecf_A 333 -PTW-VPLHNS-LRFLDDGSILWSSERTG----FQHLYRIDSK 368 (741)
T ss_dssp -SSC-CCCCSC-CEECTTSCEEEEECTTS----SCEEEEECSS
T ss_pred -CCc-CCcCCc-eEECCCCeEEEEecCCC----ccEEEEEcCC
Confidence 000 000111 12225677666665543 3568888865
No 74
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=74.07 E-value=45 Score=29.19 Aligned_cols=27 Identities=15% Similarity=0.261 Sum_probs=14.4
Q ss_pred eEEEEEcCCE-EEEEcCcCCCCCCCCcEEEEEcC
Q 016774 268 HSATLILGGR-VLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 268 ~~~~~~~~~~-l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
|++....+++ ||+.+.. .+.+++|++.
T Consensus 158 ~~~~~spdg~~l~~~~~~------~~~v~v~~~~ 185 (361)
T 3scy_A 158 HCVRITPDGKYLLADDLG------TDQIHKFNIN 185 (361)
T ss_dssp EEEEECTTSSEEEEEETT------TTEEEEEEEC
T ss_pred eEEEECCCCCEEEEEeCC------CCEEEEEEEc
Confidence 4444435565 6665422 2357777766
No 75
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=73.92 E-value=25 Score=30.45 Aligned_cols=65 Identities=12% Similarity=0.110 Sum_probs=35.0
Q ss_pred CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCc-EEEEEcccCCCCCcccce
Q 016774 102 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNR-KMVIHAGIGLYGLRLGDT 180 (383)
Q Consensus 102 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~ 180 (383)
++++|+.++.. +.++++|+ .+.+.......+ .....+..+...++ .+|+.+.. ...+
T Consensus 10 ~~~~~v~~~~~------~~v~~~d~-------~~~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~~------~~~i 67 (349)
T 1jmx_B 10 GHEYMIVTNYP------NNLHVVDV-------ASDTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLNNH------YGDI 67 (349)
T ss_dssp TCEEEEEEETT------TEEEEEET-------TTTEEEEEEECS---SCCSSCEEEECTTSSEEEEEETT------TTEE
T ss_pred CCEEEEEeCCC------CeEEEEEC-------CCCcEEEEEecC---CCCCCceeEECCCCCEEEEEeCC------CCcE
Confidence 45677777642 35888998 344443221111 10012344444443 57776532 2468
Q ss_pred EEEeccCC
Q 016774 181 WVLELSEN 188 (383)
Q Consensus 181 ~~~d~~~~ 188 (383)
+++|+.+.
T Consensus 68 ~~~d~~t~ 75 (349)
T 1jmx_B 68 YGIDLDTC 75 (349)
T ss_dssp EEEETTTT
T ss_pred EEEeCCCC
Confidence 99999876
No 76
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=73.78 E-value=41 Score=28.64 Aligned_cols=224 Identities=9% Similarity=0.018 Sum_probs=111.0
Q ss_pred CCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEEECCEEEEEcCccCCCCCccceeeeecc
Q 016774 48 SNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIA 127 (383)
Q Consensus 48 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~ 127 (383)
.+++++.|.. .+.+..++..+ ....|+.-.... ....+..+.-++++++.+. +.++.+|..
T Consensus 4 ~~~~lv~~~~------~~~v~~~d~~t---G~~~w~~~~~~~--~~~~~~~~~pdG~ilvs~~--------~~V~~~d~~ 64 (276)
T 3no2_A 4 PQHLLVGGSG------WNKIAIINKDT---KEIVWEYPLEKG--WECNSVAATKAGEILFSYS--------KGAKMITRD 64 (276)
T ss_dssp CCEEEEECTT------CSEEEEEETTT---TEEEEEEECCTT--CCCCEEEECTTSCEEEECB--------SEEEEECTT
T ss_pred CCcEEEeeCC------CCEEEEEECCC---CeEEEEeCCCcc--CCCcCeEECCCCCEEEeCC--------CCEEEECCC
Confidence 3566666652 24556666533 334676543111 1222233333566777321 248888872
Q ss_pred cccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCC--CCC
Q 016774 128 CHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPS--PPA 205 (383)
Q Consensus 128 ~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~--p~~ 205 (383)
.+..|+.-.. .....+++....++.+++..... ...++.+|++.+ ..|+....... +..
T Consensus 65 ------G~~~W~~~~~-----~~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk---~l~~~~~~~~~~~~~~ 125 (276)
T 3no2_A 65 ------GRELWNIAAP-----AGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGE---VLSKTEFETGIERPHA 125 (276)
T ss_dssp ------SCEEEEEECC-----TTCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSC---EEEEEEECCSCSSGGG
T ss_pred ------CCEEEEEcCC-----CCccccccEECCCCCEEEEecCC-----CCEEEEEeCCCC---EEEEEeccCCCCcccc
Confidence 3556775321 11123445556666776654320 235788887543 34553321111 111
Q ss_pred CCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcC
Q 016774 206 RSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGED 285 (383)
Q Consensus 206 r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~ 285 (383)
.. +.+....++.+++....+ ..|..||.+ +...|+.-. ...| +++....++.+++.+...
T Consensus 126 ~~-~~v~~~~~G~~lv~~~~~------~~v~~~d~~-G~~~w~~~~-------~~~~-----~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 126 QF-RQINKNKKGNYLVPLFAT------SEVREIAPN-GQLLNSVKL-------SGTP-----FSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp SC-SCCEECTTSCEEEEETTT------TEEEEECTT-SCEEEEEEC-------SSCC-----CEEEECTTSCEEEECBTT
T ss_pred cc-cCceECCCCCEEEEecCC------CEEEEECCC-CCEEEEEEC-------CCCc-----cceeEcCCCCEEEEeCCC
Confidence 11 122334356666554321 258999987 556787652 1111 234444678888877553
Q ss_pred CCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccCCCCCCCcc-ceeeeecCCCcEEEEEc
Q 016774 286 SARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRS-FHRACPDYSGRYLYVFG 353 (383)
Q Consensus 286 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~-~~~~~~~~~~~~l~v~G 353 (383)
..+..+|.++- +..|+.-... .+..|. ....+....++.+||..
T Consensus 186 ------~~v~~~d~~tG----------------~~~w~~~~~~--~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 186 ------HCFVQLNLESN----------------RIVRRVNAND--IEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp ------SEEEEECTTTC----------------CEEEEEEGGG--SBSCCCSEEEEEEECTTSCEEEEE
T ss_pred ------CeEEEEeCcCC----------------cEEEEecCCC--CCCccccccccceEcCCCCEEEEe
Confidence 24888888743 4567654321 111122 22333334466788776
No 77
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=73.71 E-value=43 Score=28.85 Aligned_cols=123 Identities=11% Similarity=0.006 Sum_probs=62.9
Q ss_pred CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceE
Q 016774 102 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTW 181 (383)
Q Consensus 102 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~ 181 (383)
+++||+.+... ..++++|+ .+.+...+... ....-++.+...++.+|+...... .....++
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~-------~~~~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~~--~~~~~i~ 115 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINP-------ETKEIKRPFVS----HKANPAAIKIHKDGRLFVCYLGDF--KSTGGIF 115 (333)
T ss_dssp TSCEEEEETTT------CEEEEECT-------TTCCEEEEEEC----SSSSEEEEEECTTSCEEEEECTTS--SSCCEEE
T ss_pred CCCEEEEECCC------CEEEEEeC-------CCCcEEEEeeC----CCCCcceEEECCCCcEEEEeCCCC--CCCceEE
Confidence 34588776532 25888988 45565554311 111223344445667887653211 1224689
Q ss_pred EEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEe
Q 016774 182 VLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 182 ~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i 250 (383)
++|++++ ....+.. .......-..++...++.+|+.............|++++.++ .+...+
T Consensus 116 ~~d~~~~----~~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~--~~~~~~ 177 (333)
T 2dg1_A 116 AATENGD----NLQDIIE-DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF--RTVTPI 177 (333)
T ss_dssp EECTTSC----SCEEEEC-SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS--CCEEEE
T ss_pred EEeCCCC----EEEEEEc-cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC--CEEEEe
Confidence 9999886 5442221 111112222334444567777543211112234689999876 666555
No 78
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=73.70 E-value=46 Score=29.12 Aligned_cols=115 Identities=10% Similarity=0.099 Sum_probs=58.9
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccE
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDV 235 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v 235 (383)
++...++.+++.||.+ ..+.++|+.++ .|...............++..-.++.+++.|+.+. .+
T Consensus 22 l~~sp~g~~las~~~D------~~i~iw~~~~~----~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~------~v 85 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGD------RRIRIWGTEGD----SWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA------TT 85 (345)
T ss_dssp EEECTTSSCEEEEETT------SCEEEEEEETT----EEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS------CE
T ss_pred EEECCCCCEEEEEcCC------CeEEEEEcCCC----cceeeeeeccccCCcEEEEEECCCCCEEEEEECCC------cE
Confidence 3344556777777753 24777788776 66533210111112222333334567788887642 46
Q ss_pred EEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 236 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 236 ~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.++++.. ..+..+.. ..... ... .++....++.+++.|+.++ .+.++|+.+
T Consensus 86 ~iw~~~~--~~~~~~~~-----~~~h~-~~v-~~v~~sp~~~~l~s~s~D~------~v~iwd~~~ 136 (345)
T 3fm0_A 86 CIWKKNQ--DDFECVTT-----LEGHE-NEV-KSVAWAPSGNLLATCSRDK------SVWVWEVDE 136 (345)
T ss_dssp EEEEECC--C-EEEEEE-----ECCCS-SCE-EEEEECTTSSEEEEEETTS------CEEEEEECT
T ss_pred EEEEccC--CCeEEEEE-----ccCCC-CCc-eEEEEeCCCCEEEEEECCC------eEEEEECCC
Confidence 7777776 55544320 01111 111 1222225677888888765 367777763
No 79
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=73.38 E-value=42 Score=28.58 Aligned_cols=117 Identities=16% Similarity=0.051 Sum_probs=58.1
Q ss_pred eeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCcccc
Q 016774 155 AACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLND 234 (383)
Q Consensus 155 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 234 (383)
+++...++.+++.|+ + ..+..+|+.+.........+. .........++....++..++.|+.+ ..
T Consensus 56 ~~~~~~~~~~l~~~~-d------g~i~iw~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d------~~ 120 (337)
T 1gxr_A 56 AVTISNPTRHVYTGG-K------GCVKVWDISHPGNKSPVSQLD--CLNRDNYIRSCKLLPDGCTLIVGGEA------ST 120 (337)
T ss_dssp EEEECSSSSEEEEEC-B------SEEEEEETTSTTCCSCSEEEE--CSCTTSBEEEEEECTTSSEEEEEESS------SE
T ss_pred EEEEecCCcEEEEcC-C------CeEEEEECCCCCceeeeeccc--ccCCCCcEEEEEEcCCCCEEEEEcCC------Cc
Confidence 344445556777765 2 357888887651111112211 11122222334444456677777653 25
Q ss_pred EEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 235 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 235 v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
+.++|+.+ .+...... .. ...... .++....++.+++.|+.++ .+.++|+.+
T Consensus 121 i~~~d~~~--~~~~~~~~-----~~-~~~~~i-~~~~~~~~~~~l~~~~~dg------~v~~~d~~~ 172 (337)
T 1gxr_A 121 LSIWDLAA--PTPRIKAE-----LT-SSAPAC-YALAISPDSKVCFSCCSDG------NIAVWDLHN 172 (337)
T ss_dssp EEEEECCC--C--EEEEE-----EE-CSSSCE-EEEEECTTSSEEEEEETTS------CEEEEETTT
T ss_pred EEEEECCC--CCcceeee-----cc-cCCCce-EEEEECCCCCEEEEEeCCC------cEEEEeCCC
Confidence 88999987 55433310 00 011111 2222225677777887654 488889873
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=73.20 E-value=46 Score=28.93 Aligned_cols=22 Identities=14% Similarity=0.181 Sum_probs=15.2
Q ss_pred cCCEEEEEcccCCCCCccccEEEEEccc
Q 016774 215 GGNRTVLFGGRGVGYEVLNDVWFLDVYE 242 (383)
Q Consensus 215 ~~~~i~v~GG~~~~~~~~~~v~~~~~~~ 242 (383)
.++..++.|+.+ ..|.+||+.+
T Consensus 212 ~~~~~l~~~~~d------~~i~i~d~~~ 233 (372)
T 1k8k_C 212 ANGSRVAWVSHD------STVCLADADK 233 (372)
T ss_dssp SSSSEEEEEETT------TEEEEEEGGG
T ss_pred CCCCEEEEEeCC------CEEEEEECCC
Confidence 445577777753 2588999987
No 81
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=73.07 E-value=75 Score=31.32 Aligned_cols=132 Identities=11% Similarity=0.088 Sum_probs=69.9
Q ss_pred eeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCc--c--ccceeEEECCcEEEEEcccC
Q 016774 96 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPA--R--GAHAACCIDNRKMVIHAGIG 171 (383)
Q Consensus 96 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~--r--~~~~~~~~~~~~i~v~GG~~ 171 (383)
.+-++.+++||+.... +.++.+|.. +-+..|+.-......... + .......+.++++|+...
T Consensus 64 ~~P~v~~g~vyv~~~~-------~~v~AlD~~-----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-- 129 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPF-------SVVYALDAR-----DGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-- 129 (689)
T ss_dssp CCCEEETTEEEEECGG-------GCEEEEETT-----TCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--
T ss_pred ecCEEECCEEEEEcCC-------CeEEEEECC-----CCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--
Confidence 3455678999997652 358889872 235668864321100000 0 001122334447777532
Q ss_pred CCCCcccceEEEeccCCcccCceEEccc-CCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEe
Q 016774 172 LYGLRLGDTWVLELSENFCFGSWQQLVT-HPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 172 ~~~~~~~~~~~~d~~~~~~~~~W~~~~~-~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i 250 (383)
-..++.+|.+|+ +..|+.... ..........+.++. ++.+|+-.+.. .......|+.||..++...|+.-
T Consensus 130 -----dg~l~AlDa~TG--~~~W~~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~-~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 130 -----DGRLEAIDAKTG--QRAWSVDTRADHKRSYTITGAPRVV-NGKVVIGNGGA-EFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp -----TSEEEEEETTTC--CEEEEEECCSCTTSCCBCCSCCEEE-TTEEEECCBCT-TTCCBCEEEEEETTTCCEEEEEE
T ss_pred -----CCEEEEEECCCC--CEeeeecCcCCCCCCccccCCcEEE-CCEEEEEeCCC-ccCCCCEEEEEECCCCcEEEEec
Confidence 245899999876 446876541 111111222233444 57766533221 11233469999999866779865
No 82
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=72.97 E-value=55 Score=29.71 Aligned_cols=65 Identities=17% Similarity=0.144 Sum_probs=36.6
Q ss_pred CcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEc
Q 016774 161 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV 240 (383)
Q Consensus 161 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~ 240 (383)
++.+++.|+.+ ..+.++|++++ ......... .......++....++.+++.|+.+. .|.++|+
T Consensus 176 ~~~~l~s~s~D------~~v~iwd~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~~dg------~i~~wd~ 238 (435)
T 4e54_B 176 NTNQFYASSME------GTTRLQDFKGN----ILRVFASSD-TINIWFCSLDVSASSRMVVTGDNVG------NVILLNM 238 (435)
T ss_dssp CTTEEEEECSS------SCEEEEETTSC----EEEEEECCS-SCSCCCCCEEEETTTTEEEEECSSS------BEEEEES
T ss_pred CCCEEEEEeCC------CEEEEeeccCC----ceeEEeccC-CCCccEEEEEECCCCCEEEEEeCCC------cEeeecc
Confidence 44566777642 23778888876 444443111 1112222344444677888887642 4888888
Q ss_pred cc
Q 016774 241 YE 242 (383)
Q Consensus 241 ~~ 242 (383)
..
T Consensus 239 ~~ 240 (435)
T 4e54_B 239 DG 240 (435)
T ss_dssp SS
T ss_pred Cc
Confidence 76
No 83
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=71.18 E-value=50 Score=28.50 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=48.5
Q ss_pred ECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEE
Q 016774 159 IDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFL 238 (383)
Q Consensus 159 ~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~ 238 (383)
..++..++.|+.+ ..+..||+.++ ...+..... ......++....++.+++.|+.+ ..|.++
T Consensus 184 ~~~~~~l~~~~~d------g~i~i~d~~~~-----~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d------~~i~v~ 245 (369)
T 3zwl_B 184 STKGKYIIAGHKD------GKISKYDVSNN-----YEYVDSIDL-HEKSISDMQFSPDLTYFITSSRD------TNSFLV 245 (369)
T ss_dssp CGGGCEEEEEETT------SEEEEEETTTT-----TEEEEEEEC-CSSCEEEEEECTTSSEEEEEETT------SEEEEE
T ss_pred cCCCCEEEEEcCC------CEEEEEECCCC-----cEeEEEEec-CCCceeEEEECCCCCEEEEecCC------ceEEEE
Confidence 3444666666642 35889998872 122220011 11122233333456677777653 258899
Q ss_pred EcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCC
Q 016774 239 DVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDS 286 (383)
Q Consensus 239 ~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~ 286 (383)
|+.+ .+-...- . ...+ ..++....++..+++|+.++
T Consensus 246 d~~~--~~~~~~~-------~-~~~~--~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 246 DVST--LQVLKKY-------E-TDCP--LNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp ETTT--CCEEEEE-------E-CSSC--EEEEEECSSSSEEEEEECCC
T ss_pred ECCC--Cceeeee-------c-CCCC--ceeEEecCCCceEEEeecCC
Confidence 9987 5443331 1 1111 12223235666777766544
No 84
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=71.06 E-value=74 Score=31.24 Aligned_cols=131 Identities=15% Similarity=0.086 Sum_probs=69.8
Q ss_pred eeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCC-----ccccceeEEECCcEEEEEccc
Q 016774 96 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPP-----ARGAHAACCIDNRKMVIHAGI 170 (383)
Q Consensus 96 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~-----~r~~~~~~~~~~~~i~v~GG~ 170 (383)
.+-++.++.||+.... +.++.+|.. +-+..|+.-........ .......++ .++++|+...
T Consensus 60 ~~P~v~~g~vyv~~~~-------~~v~AlD~~-----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~- 125 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW-------SRVIAVDAA-----SGKELWRYDPEVAKVKARTSCCDAVNRGVAL-WGDKVYVGTL- 125 (668)
T ss_dssp CCCEEETTEEEEEEGG-------GEEEEEETT-----TCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-EBTEEEEECT-
T ss_pred cCCEEECCEEEEECCC-------CeEEEEECC-----CChhceEECCCCCccccccccccCCccceEE-ECCEEEEEcC-
Confidence 4456678999987652 358888872 23566886432110000 000112233 3447777432
Q ss_pred CCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEe
Q 016774 171 GLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 171 ~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i 250 (383)
-..++.+|..++ +..|+..............+.++. ++.+|+-.+. ........|+.||.+++...|+.-
T Consensus 126 ------dg~l~alD~~tG--~~~W~~~~~~~~~~~~~~~~P~v~-~~~v~vg~~~-~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 126 ------DGRLIALDAKTG--KAIWSQQTTDPAKPYSITGAPRVV-KGKVIIGNGG-AEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp ------TSEEEEEETTTC--CEEEEEECSCTTSSCBCCSCCEEE-TTEEEECCBC-TTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ------CCEEEEEECCCC--CEeeeeccCCCCCcceecCCCEEE-CCEEEEeCCC-CCcCCCCEEEEEECCCCcEEEEec
Confidence 245899999876 456876541111111222233344 5776653322 111233469999999866779875
No 85
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=70.63 E-value=74 Score=30.23 Aligned_cols=62 Identities=5% Similarity=-0.120 Sum_probs=32.9
Q ss_pred CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCc-EEEEEcccCCCCCcccce
Q 016774 102 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNR-KMVIHAGIGLYGLRLGDT 180 (383)
Q Consensus 102 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~ 180 (383)
++++|+.+... +.+.++|. .+.+.......+ ...|.++...++ .+|+.+ .+ +.+
T Consensus 148 ~~~~~vs~~~d------~~V~v~D~-------~t~~~~~~i~~g-----~~~~~v~~spdg~~l~v~~-~d------~~V 202 (543)
T 1nir_A 148 PNLFSVTLRDA------GQIALVDG-------DSKKIVKVIDTG-----YAVHISRMSASGRYLLVIG-RD------ARI 202 (543)
T ss_dssp GGEEEEEEGGG------TEEEEEET-------TTCCEEEEEECS-----TTEEEEEECTTSCEEEEEE-TT------SEE
T ss_pred CCEEEEEEcCC------CeEEEEEC-------CCceEEEEEecC-----cccceEEECCCCCEEEEEC-CC------CeE
Confidence 46677776542 24777887 344433221111 114555454444 455543 21 569
Q ss_pred EEEec--cCC
Q 016774 181 WVLEL--SEN 188 (383)
Q Consensus 181 ~~~d~--~~~ 188 (383)
..||+ .+.
T Consensus 203 ~v~D~~~~t~ 212 (543)
T 1nir_A 203 DMIDLWAKEP 212 (543)
T ss_dssp EEEETTSSSC
T ss_pred EEEECcCCCC
Confidence 99999 554
No 86
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=70.60 E-value=65 Score=29.55 Aligned_cols=192 Identities=15% Similarity=0.131 Sum_probs=93.6
Q ss_pred cceEEcC-CCCCCCCcceeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEE
Q 016774 80 LKWQKVN-SGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACC 158 (383)
Q Consensus 80 ~~W~~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~ 158 (383)
..|++.. +..|..-.-|+.|.+++.=|.+|=.+.... -.++=.+-.+. .++.....-.+..+.. . .+-+.--|+-
T Consensus 270 spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~-PRe~G~~yfs~-~~~sp~~~vrr~i~se-y-~~~AsEPCvk 345 (670)
T 3ju4_A 270 SPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVA-PREVGLFYFPD-AFNSPSNYVRRQIPSE-Y-EPDASEPCIK 345 (670)
T ss_dssp SCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSS-SCEEEEEEETT-TTTCTTCCEEEECCGG-G-CTTEEEEEEE
T ss_pred CCceecccccccceeeeeeeeEecCCceEEEeccCCCC-cceeeEEEecc-cccCCcceeeeechhh-h-ccccccchhh
Confidence 3787643 235666778999999988778875443221 12222222211 1111222222221110 1 1111222333
Q ss_pred ECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCC--CCceEEEEcCCEEEEEcccCC---------
Q 016774 159 IDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPAR--SGHSLTRIGGNRTVLFGGRGV--------- 227 (383)
Q Consensus 159 ~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r--~~~~~~~~~~~~i~v~GG~~~--------- 227 (383)
..++.+|+.---......-+.+.+-+.... .|+.+. .|... ...--+.+ ++.|||||-.-.
T Consensus 346 yYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq----~w~slr---fp~nvHhtnlPFakv-gD~l~mFgsERA~nEWE~G~p 417 (670)
T 3ju4_A 346 YYDGVLYLITRGTRGDRLGSSLHRSRDIGQ----TWESLR---FPHNVHHTTLPFAKV-GDDLIMFGSERAENEWEAGAP 417 (670)
T ss_dssp EETTEEEEEEEESCTTSCCCEEEEESSTTS----SCEEEE---CTTCCCSSCCCEEEE-TTEEEEEEECSSTTCSSTTCC
T ss_pred hhCCEEEEEecCcCCCCCcceeeeecccCC----chhhee---ccccccccCCCccee-CCEEEEEeccccccccccCCC
Confidence 455588887432222233455666666665 899886 22211 11123556 599999997510
Q ss_pred CCCc---cccE--EEEEccc---CccceEEecccccCCCCCCCCCceeeEEEEEcCCEE-EEEcCcC
Q 016774 228 GYEV---LNDV--WFLDVYE---GFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRV-LIYGGED 285 (383)
Q Consensus 228 ~~~~---~~~v--~~~~~~~---~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l-~i~GG~~ 285 (383)
...+ .... .+.++.. +.-.|..|.- +--.+.....-.+.+++++.++-| |||||.+
T Consensus 418 D~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItd--qIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd 482 (670)
T 3ju4_A 418 DDRYKASYPRTFYARLNVNNWNADDIEWVNITD--QIYQGGIVNSGVGVGSVVVKDNYIYYMFGGED 482 (670)
T ss_dssp CCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEE--CBBCCSSSCCCSEEEEEEEETTEEEEEEEEBC
T ss_pred cccccccCCceEEEEeecccCCccceEEEEeec--ceeccccccccccceeEEEeCCEEEEEecCcc
Confidence 0111 1122 2333332 3356777641 112233344445666666677765 5899975
No 87
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=69.99 E-value=56 Score=28.55 Aligned_cols=16 Identities=25% Similarity=0.279 Sum_probs=10.5
Q ss_pred eeeeecCCCcEEEEEc
Q 016774 338 HRACPDYSGRYLYVFG 353 (383)
Q Consensus 338 ~~~~~~~~~~~l~v~G 353 (383)
|+.++..+++.+|+.+
T Consensus 158 ~~~~~spdg~~l~~~~ 173 (361)
T 3scy_A 158 HCVRITPDGKYLLADD 173 (361)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred eEEEECCCCCEEEEEe
Confidence 5566666676777765
No 88
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=69.18 E-value=61 Score=28.65 Aligned_cols=108 Identities=14% Similarity=0.099 Sum_probs=55.0
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccE
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDV 235 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v 235 (383)
++...++..++.|+.+ ..+.++|+.+. +....-. . ......++....++ +++.|+.+ ..+
T Consensus 253 ~~~~~~~~~l~~~~~d------~~i~i~d~~~~----~~~~~~~-~--~~~~i~~~~~~~~~-~l~~~~~d------~~i 312 (425)
T 1r5m_A 253 LEFNDTNKLLLSASDD------GTLRIWHGGNG----NSQNCFY-G--HSQSIVSASWVGDD-KVISCSMD------GSV 312 (425)
T ss_dssp EEEETTTTEEEEEETT------SCEEEECSSSB----SCSEEEC-C--CSSCEEEEEEETTT-EEEEEETT------SEE
T ss_pred EEECCCCCEEEEEcCC------CEEEEEECCCC----ccceEec-C--CCccEEEEEECCCC-EEEEEeCC------CcE
Confidence 3444455667776642 34888888765 2211111 1 11222334444445 66666653 258
Q ss_pred EEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 236 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 236 ~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
.+||+.+ .+-.... . ...... .++....++.+++.|+.++ .+.++|+.
T Consensus 313 ~i~d~~~--~~~~~~~-------~-~~~~~i-~~~~~s~~~~~l~~~~~dg------~i~i~~~~ 360 (425)
T 1r5m_A 313 RLWSLKQ--NTLLALS-------I-VDGVPI-FAGRISQDGQKYAVAFMDG------QVNVYDLK 360 (425)
T ss_dssp EEEETTT--TEEEEEE-------E-CTTCCE-EEEEECTTSSEEEEEETTS------CEEEEECH
T ss_pred EEEECCC--CcEeEec-------c-cCCccE-EEEEEcCCCCEEEEEECCC------eEEEEECC
Confidence 8999876 4322221 1 111111 2222225677888887654 47788876
No 89
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=68.38 E-value=69 Score=29.00 Aligned_cols=116 Identities=6% Similarity=0.028 Sum_probs=60.2
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEE-EcccCCCCCcccc
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVL-FGGRGVGYEVLND 234 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v-~GG~~~~~~~~~~ 234 (383)
.+...+++.+++++... ....++++|+.++ +...+. ..+. ...+...-.+++.++ .+..+. ...
T Consensus 184 ~~~Spdg~~la~~s~~~---~~~~i~~~d~~tg----~~~~l~--~~~~--~~~~~~~spdg~~la~~~~~~g----~~~ 248 (415)
T 2hqs_A 184 PAWSPDGSKLAYVTFES---GRSALVIQTLANG----AVRQVA--SFPR--HNGAPAFSPDGSKLAFALSKTG----SLN 248 (415)
T ss_dssp EEECTTSSEEEEEECTT---SSCEEEEEETTTC----CEEEEE--CCSS--CEEEEEECTTSSEEEEEECTTS----SCE
T ss_pred eEEcCCCCEEEEEEecC---CCcEEEEEECCCC----cEEEee--cCCC--cccCEEEcCCCCEEEEEEecCC----Cce
Confidence 33444556666665422 1257999999987 666554 2221 122233333455444 443321 236
Q ss_pred EEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 235 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 235 v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
|+.+|+.+ .+...+. ..+. .. .+.....+++.+++++... ....+|.+|+.+
T Consensus 249 i~~~d~~~--~~~~~l~--------~~~~-~~-~~~~~spdg~~l~~~s~~~---g~~~i~~~d~~~ 300 (415)
T 2hqs_A 249 LYVMDLAS--GQIRQVT--------DGRS-NN-TEPTWFPDSQNLAFTSDQA---GRPQVYKVNING 300 (415)
T ss_dssp EEEEETTT--CCEEECC--------CCSS-CE-EEEEECTTSSEEEEEECTT---SSCEEEEEETTS
T ss_pred EEEEECCC--CCEEeCc--------CCCC-cc-cceEECCCCCEEEEEECCC---CCcEEEEEECCC
Confidence 99999988 7766663 1111 11 1222225666555554321 134689999874
No 90
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=67.96 E-value=96 Score=30.47 Aligned_cols=130 Identities=9% Similarity=-0.065 Sum_probs=69.8
Q ss_pred cceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCC-------CcceeEEEECCEEEEEcCccCC
Q 016774 42 HSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSG-------RFGHTCVVIGDCLVLFGGINDR 114 (383)
Q Consensus 42 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~ 114 (383)
.+-++.++.||+... .+.++.+|..+ ....|+.-....... ....+.++.+++||+....
T Consensus 71 ~~P~v~~g~vyv~~~-------~~~v~AlD~~t---G~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d--- 137 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS-------WSVVHAIDTRT---GNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD--- 137 (677)
T ss_dssp CCCEEETTEEEEECG-------GGCEEEEETTT---TEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT---
T ss_pred eCCEEECCEEEEECC-------CCeEEEEECCC---CcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC---
Confidence 344567889888765 24677787744 344787643211110 1223456678888886431
Q ss_pred CCCccceeeeecccccCCcccccEEEccCCCCCCC-ccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCc
Q 016774 115 GNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPP-ARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGS 193 (383)
Q Consensus 115 ~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~-~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~ 193 (383)
..++.+|.. +-+..|+.-.... .+. .....+.+.. ++.+|+..+... ......++.||..++ +..
T Consensus 138 ----g~l~alD~~-----tG~~~W~~~~~~~-~~~~~~~~~~p~v~-~~~v~v~~~~~~-~~~~g~v~a~D~~tG--~~~ 203 (677)
T 1kb0_A 138 ----GRLIALDAA-----TGKEVWHQNTFEG-QKGSLTITGAPRVF-KGKVIIGNGGAE-YGVRGYITAYDAETG--ERK 203 (677)
T ss_dssp ----SEEEEEETT-----TCCEEEEEETTTT-CCSSCBCCSCCEEE-TTEEEECCBCTT-TCCBCEEEEEETTTC--CEE
T ss_pred ----CEEEEEECC-----CCCEEeeecCCcC-cCcCcccccCcEEE-CCEEEEEecccc-cCCCCEEEEEECCCC--cEE
Confidence 358889882 1245687643201 111 1112223333 447776543211 113467999999886 345
Q ss_pred eEEcc
Q 016774 194 WQQLV 198 (383)
Q Consensus 194 W~~~~ 198 (383)
|+.-.
T Consensus 204 W~~~~ 208 (677)
T 1kb0_A 204 WRWFS 208 (677)
T ss_dssp EEEES
T ss_pred EEecc
Confidence 76544
No 91
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=66.90 E-value=92 Score=29.86 Aligned_cols=130 Identities=8% Similarity=0.055 Sum_probs=69.2
Q ss_pred cceeeeCCEEEEEccccCCCCCCCceEEEEe-ccCcccccceEEcCCCCCCC-------CcceeEEEECCEEEEEcCccC
Q 016774 42 HSLNFVSNCLVLFGGGCEGGRHLDDTWVAYV-GNDFQGMLKWQKVNSGIPSG-------RFGHTCVVIGDCLVLFGGIND 113 (383)
Q Consensus 42 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~-~~~~~~~~~W~~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~ 113 (383)
.+-++.++.||+.... ...++.+|. .+ ....|+.-....... ....+.++.+++||+....
T Consensus 56 ~~P~v~~g~vyv~~~~------~~~v~AlD~~~t---G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-- 124 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF------PNNTYALNLNDP---GKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN-- 124 (571)
T ss_dssp SCCEEETTEEEEECST------TTCEEEEETTCT---TSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT--
T ss_pred cccEEECCEEEEEeCC------CCEEEEEeCCCC---ccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC--
Confidence 4445678899987652 246788886 44 334888643211100 1123456678888887431
Q ss_pred CCCCccceeeeecccccCCcccccEEEccCCCCCCCc-cccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccC
Q 016774 114 RGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPA-RGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFG 192 (383)
Q Consensus 114 ~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~-r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~ 192 (383)
..++.+|.. +-+..|+.-... .+.. ....+.+..+ +.+|+..+.... .....++.||..++ +.
T Consensus 125 -----g~l~alD~~-----tG~~~W~~~~~~--~~~~~~~~~~P~v~~-g~v~vg~~~~~~-~~~g~v~a~D~~tG--~~ 188 (571)
T 2ad6_A 125 -----GHLLALDAK-----TGKINWEVEVCD--PKVGSTLTQAPFVAK-DTVLMGCSGAEL-GVRGAVNAFDLKTG--EL 188 (571)
T ss_dssp -----SEEEEEETT-----TCCEEEEEECCC--GGGTCBCCSCCEEET-TEEEEECBCGGG-TCCCEEEEEETTTC--CE
T ss_pred -----CEEEEEECC-----CCCEEEEecCCC--CCccceeccCCEEEC-CEEEEEecCCcc-CCCCEEEEEECCCC--cE
Confidence 258889972 124568764221 1111 1112223334 477765432111 12356899999876 34
Q ss_pred ceEEcc
Q 016774 193 SWQQLV 198 (383)
Q Consensus 193 ~W~~~~ 198 (383)
.|+.-.
T Consensus 189 ~W~~~~ 194 (571)
T 2ad6_A 189 KWRAFA 194 (571)
T ss_dssp EEEEES
T ss_pred EEEEcc
Confidence 676543
No 92
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=66.44 E-value=60 Score=27.57 Aligned_cols=108 Identities=6% Similarity=0.036 Sum_probs=55.9
Q ss_pred ECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEE
Q 016774 159 IDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFL 238 (383)
Q Consensus 159 ~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~ 238 (383)
..++.+++.|+.+ ..+..+|+.+. +-...-. ... ....++....++.+++.|+.+. .+.+|
T Consensus 116 ~~~~~~l~s~~~d------~~i~iwd~~~~----~~~~~~~-~~~--~~v~~~~~~~~~~~l~~~~~d~------~i~~w 176 (312)
T 4ery_A 116 NPQSNLIVSGSFD------ESVRIWDVKTG----KCLKTLP-AHS--DPVSAVHFNRDGSLIVSSSYDG------LCRIW 176 (312)
T ss_dssp CSSSSEEEEEETT------SCEEEEETTTC----CEEEEEC-CCS--SCEEEEEECTTSSEEEEEETTS------CEEEE
T ss_pred cCCCCEEEEEeCC------CcEEEEECCCC----EEEEEec-CCC--CcEEEEEEcCCCCEEEEEeCCC------cEEEE
Confidence 3445677777642 34888898876 3322211 111 1112223333466777777642 48899
Q ss_pred EcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 239 DVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 239 ~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
|+.+ .+-.... ......... +.....++..++.|+.++ .+.++|+.+
T Consensus 177 d~~~--~~~~~~~-------~~~~~~~~~-~~~~~~~~~~l~~~~~d~------~i~iwd~~~ 223 (312)
T 4ery_A 177 DTAS--GQCLKTL-------IDDDNPPVS-FVKFSPNGKYILAATLDN------TLKLWDYSK 223 (312)
T ss_dssp ETTT--CCEEEEE-------CCSSCCCEE-EEEECTTSSEEEEEETTT------EEEEEETTT
T ss_pred ECCC--CceeeEE-------eccCCCceE-EEEECCCCCEEEEEcCCC------eEEEEECCC
Confidence 9887 5433221 001111111 122225677777777654 478888873
No 93
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=64.87 E-value=1e+02 Score=29.65 Aligned_cols=132 Identities=10% Similarity=0.070 Sum_probs=67.6
Q ss_pred eeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCcc---ccceeEEECCcEEEEEcccCC
Q 016774 96 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPAR---GAHAACCIDNRKMVIHAGIGL 172 (383)
Q Consensus 96 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r---~~~~~~~~~~~~i~v~GG~~~ 172 (383)
.+-++.+++||+.... +.++.+|.. +-+..|+.-........+. .....++ .++++|+...
T Consensus 62 ~~P~v~~g~vyv~~~~-------~~v~AlD~~-----tG~~~W~~~~~~~~~~~~~~~~~~~g~a~-~~~~v~~~t~--- 125 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY-------SRLFALDAK-----TGKRLWTYNHRLPDDIRPCCDVVNRGAAI-YGDKVFFGTL--- 125 (582)
T ss_dssp CCCEEETTEEEEEETT-------TEEEEEESS-----SCCEEEEEECCCCTTCCCSSCSCCCCCEE-ETTEEEEEET---
T ss_pred eccEEECCEEEEEcCC-------CCEEEEECC-----CCcEEEEEcCCCCcccccccccCCCccEE-ECCEEEEEeC---
Confidence 3456678999997653 138888882 2356688754321110010 0122233 4447777431
Q ss_pred CCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCC----E-EEEEcccCCCCCccccEEEEEcccCccce
Q 016774 173 YGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGN----R-TVLFGGRGVGYEVLNDVWFLDVYEGFFKW 247 (383)
Q Consensus 173 ~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~----~-i~v~GG~~~~~~~~~~v~~~~~~~~~~~W 247 (383)
-..++.+|.+|+ +..|+.-............+.++.+ + + ++++|...........++.||.+++...|
T Consensus 126 ----dg~l~AlD~~TG--~~~W~~~~~~~~~~~~~~~sP~v~~-~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 126 ----DASVVALNKNTG--KVVWKKKFADHGAGYTMTGAPTIVK-DGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp ----TTEEEEEESSSC--CEEEEEECSCGGGTCBCCSCCEEEE-CTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE
T ss_pred ----CCEEEEEECCCC--CEEeeecCCCCCcCcccccCCEEeC-CCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe
Confidence 245899999886 4568764311000001111223342 4 1 34444431111223469999999866789
Q ss_pred EEe
Q 016774 248 VQI 250 (383)
Q Consensus 248 ~~i 250 (383)
+.-
T Consensus 199 ~~~ 201 (582)
T 1flg_A 199 MRP 201 (582)
T ss_dssp EEE
T ss_pred ecC
Confidence 653
No 94
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=64.42 E-value=75 Score=27.93 Aligned_cols=74 Identities=8% Similarity=-0.098 Sum_probs=37.5
Q ss_pred eeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCC--C-CCCCCCceEEEEcCCEEEEEcccCCCCCc
Q 016774 155 AACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHP--S-PPARSGHSLTRIGGNRTVLFGGRGVGYEV 231 (383)
Q Consensus 155 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~--~-p~~r~~~~~~~~~~~~i~v~GG~~~~~~~ 231 (383)
++....++ +++.|+. -..+..||+.+. +-...-... . +......++....++.+++.|+.+. .
T Consensus 191 ~~~~~~~~-~l~~~~~------dg~i~i~d~~~~----~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~---~ 256 (397)
T 1sq9_A 191 SVDISERG-LIATGFN------NGTVQISELSTL----RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN---S 256 (397)
T ss_dssp EEEECTTS-EEEEECT------TSEEEEEETTTT----EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET---T
T ss_pred EEEECCCc-eEEEEeC------CCcEEEEECCCC----ceeEEEeccccccccCCccceEEECCCCCEEEEEecCC---C
Confidence 44444565 6666653 245888998876 322221110 1 0012222333333566777776531 1
Q ss_pred cccEEEEEccc
Q 016774 232 LNDVWFLDVYE 242 (383)
Q Consensus 232 ~~~v~~~~~~~ 242 (383)
...|.+||+.+
T Consensus 257 ~g~i~i~d~~~ 267 (397)
T 1sq9_A 257 FGCITLYETEF 267 (397)
T ss_dssp EEEEEEEETTT
T ss_pred CceEEEEECCC
Confidence 13588999876
No 95
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=63.76 E-value=80 Score=28.06 Aligned_cols=110 Identities=15% Similarity=0.099 Sum_probs=54.9
Q ss_pred EEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEccc
Q 016774 163 KMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE 242 (383)
Q Consensus 163 ~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~ 242 (383)
.+++.|+.+ ..+.++|+.+. +....-. .........++....++.+++.|+.+ ..|.++|+.+
T Consensus 145 ~~l~s~~~d------g~i~iwd~~~~----~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~ 207 (402)
T 2aq5_A 145 NVLLSAGCD------NVILVWDVGTG----AAVLTLG-PDVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRK 207 (402)
T ss_dssp TEEEEEETT------SCEEEEETTTT----EEEEEEC-TTTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTT
T ss_pred CEEEEEcCC------CEEEEEECCCC----CccEEEe-cCCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCC
Confidence 477777642 34888998876 3332210 01112222333333456677777753 2589999887
Q ss_pred CccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 243 GFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 243 ~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.+-.... .......+. .++....++.+++.|.... .-..+.++|+.+
T Consensus 208 --~~~~~~~------~~~~~~~~~-~~~~~~~~~~~l~~g~~~~---~d~~i~iwd~~~ 254 (402)
T 2aq5_A 208 --GTVVAEK------DRPHEGTRP-VHAVFVSEGKILTTGFSRM---SERQVALWDTKH 254 (402)
T ss_dssp --TEEEEEE------ECSSCSSSC-CEEEECSTTEEEEEEECTT---CCEEEEEEETTB
T ss_pred --Cceeeee------ccCCCCCcc-eEEEEcCCCcEEEEeccCC---CCceEEEEcCcc
Confidence 4332220 000111112 2233236777777773211 123588899873
No 96
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=63.40 E-value=1.2e+02 Score=29.84 Aligned_cols=132 Identities=13% Similarity=0.043 Sum_probs=70.8
Q ss_pred eeEEEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCc--c--ccceeEEECCcEEEEEcccC
Q 016774 96 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPA--R--GAHAACCIDNRKMVIHAGIG 171 (383)
Q Consensus 96 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~--r--~~~~~~~~~~~~i~v~GG~~ 171 (383)
.+-++.++.||+.... +.++.+|.. +-+..|+.-........+ . .......+.++.+|+...
T Consensus 71 ~~P~v~~g~vyv~~~~-------~~v~AlD~~-----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-- 136 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASW-------SVVHAIDTR-----TGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-- 136 (677)
T ss_dssp CCCEEETTEEEEECGG-------GCEEEEETT-----TTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--
T ss_pred eCCEEECCEEEEECCC-------CeEEEEECC-----CCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC--
Confidence 4456678999988652 358889872 235668864332100000 0 011122334547877532
Q ss_pred CCCCcccceEEEeccCCcccCceEEccc-CCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEe
Q 016774 172 LYGLRLGDTWVLELSENFCFGSWQQLVT-HPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 172 ~~~~~~~~~~~~d~~~~~~~~~W~~~~~-~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i 250 (383)
-..++.+|..++ +..|+.-.. ..........+.++. ++.+|+..+.. .......|+.||..++...|+.-
T Consensus 137 -----dg~l~alD~~tG--~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~-~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 137 -----DGRLIALDAATG--KEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGA-EYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp -----TSEEEEEETTTC--CEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCT-TTCCBCEEEEEETTTCCEEEEEE
T ss_pred -----CCEEEEEECCCC--CEEeeecCCcCcCcCcccccCcEEE-CCEEEEEeccc-ccCCCCEEEEEECCCCcEEEEec
Confidence 245999999876 446876531 111111112223334 57766544322 11234569999999866779875
No 97
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=62.09 E-value=74 Score=27.12 Aligned_cols=65 Identities=5% Similarity=-0.191 Sum_probs=36.7
Q ss_pred CcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCE-EEEEcccCCCCCccccEEEEE
Q 016774 161 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNR-TVLFGGRGVGYEVLNDVWFLD 239 (383)
Q Consensus 161 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~v~~~~ 239 (383)
.+.+|+.... -+.+.++|+.++ +...... .+.. ...++.-.+++ +|+.+... ..++++|
T Consensus 9 ~~~~~v~~~~------~~~v~~~d~~~~----~~~~~~~--~~~~--~~~~~~s~dg~~l~~~~~~~------~~i~~~d 68 (331)
T 3u4y_A 9 SNFGIVVEQH------LRRISFFSTDTL----EILNQIT--LGYD--FVDTAITSDCSNVVVTSDFC------QTLVQIE 68 (331)
T ss_dssp CCEEEEEEGG------GTEEEEEETTTC----CEEEEEE--CCCC--EEEEEECSSSCEEEEEESTT------CEEEEEE
T ss_pred CCEEEEEecC------CCeEEEEeCccc----ceeeeEE--ccCC--cceEEEcCCCCEEEEEeCCC------CeEEEEE
Confidence 4467877653 246899999887 6554431 1111 11233333444 66555432 2699999
Q ss_pred cccCccce
Q 016774 240 VYEGFFKW 247 (383)
Q Consensus 240 ~~~~~~~W 247 (383)
+.+ .+-
T Consensus 69 ~~~--~~~ 74 (331)
T 3u4y_A 69 TQL--EPP 74 (331)
T ss_dssp CSS--SSC
T ss_pred CCC--Cce
Confidence 988 553
No 98
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=60.93 E-value=86 Score=27.50 Aligned_cols=62 Identities=6% Similarity=0.015 Sum_probs=32.5
Q ss_pred EEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEE--cCCEEEEEcccCCCCCccccEEEEEc
Q 016774 163 KMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRI--GGNRTVLFGGRGVGYEVLNDVWFLDV 240 (383)
Q Consensus 163 ~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~~~~ 240 (383)
.+++.|+.+ ..+.++|+.+. +-...- ..........++.. .++.+++.|+.+. .|.++|+
T Consensus 183 ~~l~s~s~D------~~v~iwd~~~~----~~~~~~--~~~~~~~~~~~~~~~p~~~~~l~sg~~dg------~v~~wd~ 244 (344)
T 4gqb_B 183 SVFLSCSED------NRILLWDTRCP----KPASQI--GCSAPGYLPTSLAWHPQQSEVFVFGDENG------TVSLVDT 244 (344)
T ss_dssp TEEEEEETT------SCEEEEETTSS----SCEEEC--C----CCCEEEEEECSSCTTEEEEEETTS------EEEEEES
T ss_pred Cceeeeccc------ccccccccccc----ceeeee--ecceeeccceeeeecCCCCcceEEeccCC------cEEEEEC
Confidence 577777642 34788898876 332221 11111111122222 2356778887642 4888998
Q ss_pred cc
Q 016774 241 YE 242 (383)
Q Consensus 241 ~~ 242 (383)
.+
T Consensus 245 ~~ 246 (344)
T 4gqb_B 245 KS 246 (344)
T ss_dssp CC
T ss_pred CC
Confidence 76
No 99
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=59.40 E-value=1.2e+02 Score=28.86 Aligned_cols=161 Identities=12% Similarity=0.057 Sum_probs=70.0
Q ss_pred ceeeeecccccCCcccccEEEccCCCCCCCccccceeEEEC-CcEEEEEcccCCCCCcccceEEEeccCCcc-cCceEEc
Q 016774 120 DTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCID-NRKMVIHAGIGLYGLRLGDTWVLELSENFC-FGSWQQL 197 (383)
Q Consensus 120 ~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~-~~~W~~~ 197 (383)
.+.++|+ .+.+-......+..|.+-.+.. .... .+.+|+.+... -+.+-.+|+++... ...|+.+
T Consensus 347 ~v~v~D~-------~tg~l~~~i~~g~~ph~g~g~~-~~~p~~g~~~~s~~~~-----d~~V~v~d~~~~~~~~~~~~~v 413 (543)
T 1nir_A 347 KVAVIDS-------KDRRLSALVDVGKTPHPGRGAN-FVHPKYGPVWSTSHLG-----DGSISLIGTDPKNHPQYAWKKV 413 (543)
T ss_dssp EEEEEET-------TTTEEEEEEECSSSBCCTTCEE-EEETTTEEEEEEEBSS-----SSEEEEEECCTTTCTTTBTSEE
T ss_pred eEEEEEC-------CCCeEEEeeccCCCCCCCCCcc-cCCCCCccEEEeccCC-----CceEEEEEeCCCCCchhcCeEE
Confidence 5777888 4554443322233343322222 2233 36788876432 13477777766200 0126665
Q ss_pred ccCCCCCCCCCceEEEEcCCEEEEEccc-CCCCCccccEEEEEcccCccceEEecccccCCCC-CCCCCceeeEEEEEcC
Q 016774 198 VTHPSPPARSGHSLTRIGGNRTVLFGGR-GVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPA-GFSLPRVGHSATLILG 275 (383)
Q Consensus 198 ~~~~~p~~r~~~~~~~~~~~~i~v~GG~-~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~-~~p~~r~~~~~~~~~~ 275 (383)
..-..+.... ..+....+++.+..+.. +...+..+.|.+||+.+....-+.+++.. ..+ .....|..|-... .+
T Consensus 414 ~~l~~~g~~~-~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~--~~~~~~~~~~~~~~~~~-~~ 489 (543)
T 1nir_A 414 AELQGQGGGS-LFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAE--WADLGEGAKRVVQPEYN-KR 489 (543)
T ss_dssp EEEECSCSCC-CCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHH--HHCCCSSCCEEEEEEEC-SS
T ss_pred EEEEcCCCCc-eEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechh--hcccCCCCCceEeccCC-CC
Confidence 5111111111 12223334444444332 11112355799999987222222321000 000 0113455454333 44
Q ss_pred C-EEEEE--cCcCCCCCCCCcEEEEEcCC
Q 016774 276 G-RVLIY--GGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 276 ~-~l~i~--GG~~~~~~~~~~~~~~d~~~ 301 (383)
+ .+++- +|-+. .+.+.++|.++
T Consensus 490 g~~~~~s~~~~~~~----~~~i~v~D~~t 514 (543)
T 1nir_A 490 GDEVWFSVWNGKND----SSALVVVDDKT 514 (543)
T ss_dssp SSEEEEEEECCTTS----CCEEEEEETTT
T ss_pred CCEEEEEeecCCCC----CCeEEEEECCC
Confidence 4 45543 33221 45788999873
No 100
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=58.86 E-value=93 Score=27.21 Aligned_cols=109 Identities=10% Similarity=0.006 Sum_probs=53.8
Q ss_pred cceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcc
Q 016774 119 NDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLV 198 (383)
Q Consensus 119 ~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~ 198 (383)
..++.+|+ ....+..+... .+ ...........+++.+++.... .+.....++++|+.++ +...+.
T Consensus 216 ~~l~~~d~-------~~~~~~~l~~~--~~-~~~~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~g----~~~~l~ 280 (396)
T 3c5m_A 216 ARMWLVNE-------DGSNVRKIKEH--AE-GESCTHEFWIPDGSAMAYVSYF-KGQTDRVIYKANPETL----ENEEVM 280 (396)
T ss_dssp CCCEEEET-------TSCCCEESSCC--CT-TEEEEEEEECTTSSCEEEEEEE-TTTCCEEEEEECTTTC----CEEEEE
T ss_pred ceEEEEEC-------CCCceeEeecc--CC-CccccceEECCCCCEEEEEecC-CCCccceEEEEECCCC----CeEEee
Confidence 56889988 35556655431 11 1111122333344433333321 1112234999999887 666654
Q ss_pred cCCCCCCCCCceEEEEc-CCEEEEEcccCCC----------CCccccEEEEEcccCccceEEe
Q 016774 199 THPSPPARSGHSLTRIG-GNRTVLFGGRGVG----------YEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 199 ~~~~p~~r~~~~~~~~~-~~~i~v~GG~~~~----------~~~~~~v~~~~~~~~~~~W~~i 250 (383)
..+. +...... +++++++.+.... ......++.+|+.+ .....+
T Consensus 281 --~~~~----~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~--~~~~~l 335 (396)
T 3c5m_A 281 --VMPP----CSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA--KSAQKL 335 (396)
T ss_dssp --ECCS----EEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT--TBCCEE
T ss_pred --eCCC----CCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc--CceEEc
Confidence 2221 1123333 4566666543210 01234699999988 666555
No 101
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=57.43 E-value=88 Score=26.49 Aligned_cols=101 Identities=7% Similarity=-0.054 Sum_probs=57.5
Q ss_pred EEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEE
Q 016774 157 CCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVW 236 (383)
Q Consensus 157 ~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~ 236 (383)
....++.+++.... -..+.+||++-+ ..|+.-.. . .-+++....++.+++.+... ..|.
T Consensus 131 ~~~~~G~~lv~~~~------~~~v~~~d~~G~---~~w~~~~~-~-----~~~~~~~~~~g~~~v~~~~~------~~v~ 189 (276)
T 3no2_A 131 NKNKKGNYLVPLFA------TSEVREIAPNGQ---LLNSVKLS-G-----TPFSSAFLDNGDCLVACGDA------HCFV 189 (276)
T ss_dssp EECTTSCEEEEETT------TTEEEEECTTSC---EEEEEECS-S-----CCCEEEECTTSCEEEECBTT------SEEE
T ss_pred eECCCCCEEEEecC------CCEEEEECCCCC---EEEEEECC-C-----CccceeEcCCCCEEEEeCCC------CeEE
Confidence 34445566665431 245899998743 57765531 1 12345555567788776542 2489
Q ss_pred EEEcccCccceEEecccccCCCCCCCCCc--eeeEEEEEcCCEEEEEc--CcC
Q 016774 237 FLDVYEGFFKWVQIPYELQNIPAGFSLPR--VGHSATLILGGRVLIYG--GED 285 (383)
Q Consensus 237 ~~~~~~~~~~W~~i~~~~~~~~~~~p~~r--~~~~~~~~~~~~l~i~G--G~~ 285 (383)
.+|++++...|+.-. ...+..| .-.++.+..++.+|+.. |..
T Consensus 190 ~~d~~tG~~~w~~~~-------~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~ 235 (276)
T 3no2_A 190 QLNLESNRIVRRVNA-------NDIEGVQLFFVAQLFPLQNGGLYICNWQGHD 235 (276)
T ss_dssp EECTTTCCEEEEEEG-------GGSBSCCCSEEEEEEECTTSCEEEEEECTTC
T ss_pred EEeCcCCcEEEEecC-------CCCCCccccccccceEcCCCCEEEEeccCcc
Confidence 999997556787752 1112112 12334444788888876 553
No 102
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=56.25 E-value=1.2e+02 Score=27.53 Aligned_cols=67 Identities=13% Similarity=0.028 Sum_probs=34.0
Q ss_pred ccceeEEECCcEEEEEcccCCCCCc----ccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEccc
Q 016774 152 GAHAACCIDNRKMVIHAGIGLYGLR----LGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGR 225 (383)
Q Consensus 152 ~~~~~~~~~~~~i~v~GG~~~~~~~----~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~ 225 (383)
..|+++...++.+|.+|-- ..+.. ..+.............+..++. .-..|+++...++.+|.+|--
T Consensus 182 ~~hs~alt~~G~v~~wG~n-~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va------~G~~ht~~l~~~G~v~~wG~n 252 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGWG-RYGNLGLGDRTDRLVPERVTSTGGEKMSMVA------CGWRHTISVSYSGALYTYGWS 252 (406)
T ss_dssp SSEEEEEETTSCEEEEECC-TTSTTCSSSSCCEEEEEECCCSTTCCEEEEE------ECSSEEEEEETTCCEEEEECC
T ss_pred CCeEEEEeCCCCEEEeeCC-CCCCCCCCCCCCcCccEEecccCCceEEEEE------ECCCcEEEEcCCCCEEEeeCC
Confidence 4788888888899999842 12110 0111111000000000222222 234578888878899999843
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=56.14 E-value=1.2e+02 Score=27.54 Aligned_cols=113 Identities=14% Similarity=0.095 Sum_probs=56.6
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEE-cccCCCCCCCCCceEEEEcC---CEEEEEcccCCCCCc
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQ-LVTHPSPPARSGHSLTRIGG---NRTVLFGGRGVGYEV 231 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~-~~~~~~p~~r~~~~~~~~~~---~~i~v~GG~~~~~~~ 231 (383)
++...++..++.|+. ...++.+++.+. .... .............++....+ +.+++.|+.+
T Consensus 155 ~~~sp~~~~l~~~~~------~g~v~~~~~~~~----~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d----- 219 (450)
T 2vdu_B 155 ISIAEDDTTVIIADK------FGDVYSIDINSI----PEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD----- 219 (450)
T ss_dssp EEECTTSSEEEEEET------TSEEEEEETTSC----CCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----
T ss_pred EEEcCCCCEEEEEeC------CCcEEEEecCCc----ccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----
Confidence 333445566666653 245788887765 2211 00000001112233444445 6788888764
Q ss_pred cccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 232 LNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 232 ~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
..|.++|+.+ ....... ... ..... .++... ++.+++.|+.++ .+.++|+.+
T Consensus 220 -~~i~vwd~~~--~~~~~~~------~~~-h~~~v-~~~~~s-d~~~l~s~~~d~------~v~vwd~~~ 271 (450)
T 2vdu_B 220 -EHIKISHYPQ--CFIVDKW------LFG-HKHFV-SSICCG-KDYLLLSAGGDD------KIFAWDWKT 271 (450)
T ss_dssp -SCEEEEEESC--TTCEEEE------CCC-CSSCE-EEEEEC-STTEEEEEESSS------EEEEEETTT
T ss_pred -CcEEEEECCC--Cceeeee------ecC-CCCce-EEEEEC-CCCEEEEEeCCC------eEEEEECCC
Confidence 2588899887 4433221 011 11112 222332 677777887543 477888774
No 104
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=55.97 E-value=1e+02 Score=26.91 Aligned_cols=112 Identities=9% Similarity=0.014 Sum_probs=60.3
Q ss_pred EEECCc-EEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEc-CCEEEEEcccCCCCCcccc
Q 016774 157 CCIDNR-KMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG-GNRTVLFGGRGVGYEVLND 234 (383)
Q Consensus 157 ~~~~~~-~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~-~~~i~v~GG~~~~~~~~~~ 234 (383)
....++ .+++.|+.+ ..+.++|+.+. +...... .........++.... ++.+++.|+.+. .
T Consensus 80 ~~~~~~~~~l~s~~~d------g~i~iwd~~~~----~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~~~d~------~ 142 (383)
T 3ei3_B 80 EWHPTHPTTVAVGSKG------GDIILWDYDVQ----NKTSFIQ-GMGPGDAITGMKFNQFNTNQLFVSSIRG------A 142 (383)
T ss_dssp EECSSCTTEEEEEEBT------SCEEEEETTST----TCEEEEC-CCSTTCBEEEEEEETTEEEEEEEEETTT------E
T ss_pred EECCCCCCEEEEEcCC------CeEEEEeCCCc----ccceeee-cCCcCCceeEEEeCCCCCCEEEEEeCCC------E
Confidence 333444 577777642 35888898876 5544431 011112222333333 246777776642 5
Q ss_pred EEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 235 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 235 v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
|.++|+.+ .....+. ........-.++....++.+++.|+.++ .+.++|+.
T Consensus 143 i~iwd~~~--~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~i~d~~ 193 (383)
T 3ei3_B 143 TTLRDFSG--SVIQVFA-------KTDSWDYWYCCVDVSVSRQMLATGDSTG------RLLLLGLD 193 (383)
T ss_dssp EEEEETTS--CEEEEEE-------CCCCSSCCEEEEEEETTTTEEEEEETTS------EEEEEETT
T ss_pred EEEEECCC--CceEEEe-------ccCCCCCCeEEEEECCCCCEEEEECCCC------CEEEEECC
Confidence 88899987 6666663 1111111122333336677888887754 47888875
No 105
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=55.69 E-value=1.5e+02 Score=28.69 Aligned_cols=107 Identities=13% Similarity=0.067 Sum_probs=52.4
Q ss_pred ccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCcc-ceEEeccccc
Q 016774 177 LGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFF-KWVQIPYELQ 255 (383)
Q Consensus 177 ~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~-~W~~i~~~~~ 255 (383)
...++++|+.++ +-..+... .........+..-.+++.++++..+ .......|+.+|+.+ . ....+.....
T Consensus 234 ~~~l~~~d~~~~----~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~~v~~~d~~~--g~~~~~~~~~~~ 305 (706)
T 2z3z_A 234 HVTVGIYHLATG----KTVYLQTG-EPKEKFLTNLSWSPDENILYVAEVN-RAQNECKVNAYDAET--GRFVRTLFVETD 305 (706)
T ss_dssp EEEEEEEETTTT----EEEECCCC-SCTTCEEEEEEECTTSSEEEEEEEC-TTSCEEEEEEEETTT--CCEEEEEEEEEC
T ss_pred eeEEEEEECCCC----ceEeeccC-CCCceeEeeEEEECCCCEEEEEEeC-CCCCeeEEEEEECCC--CceeeEEEEccC
Confidence 456899999887 54444311 1111111223333455555555443 222344799999988 6 5655531000
Q ss_pred CCCCCCCCCceeeEEEEEc--CCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 256 NIPAGFSLPRVGHSATLIL--GGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 256 ~~~~~~p~~r~~~~~~~~~--~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
...... . .+..... ++++++.+..++ ...+|.+|.+
T Consensus 306 ---~~~~~~-~-~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~ 343 (706)
T 2z3z_A 306 ---KHYVEP-L-HPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTT 343 (706)
T ss_dssp ---SSCCCC-C-SCCEECTTCSSEEEEEECTTS----SCEEEEEETT
T ss_pred ---CCeECc-c-CCceeecCCCCEEEEEEccCC----ccEEEEEECC
Confidence 000000 0 1122225 777666665443 4568888854
No 106
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=55.45 E-value=1.2e+02 Score=27.38 Aligned_cols=108 Identities=10% Similarity=0.026 Sum_probs=56.3
Q ss_pred CcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEE-cCCEEEEEcccCCCCCccccEEEEE
Q 016774 161 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRI-GGNRTVLFGGRGVGYEVLNDVWFLD 239 (383)
Q Consensus 161 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~~i~v~GG~~~~~~~~~~v~~~~ 239 (383)
+..+++.|+.+ ..+.++|+.++ .-..... .......-.++... .++.+++.|+.+. .|.++|
T Consensus 131 ~~~~lasGs~d------g~i~lWd~~~~----~~~~~~~-~~gH~~~V~~l~f~p~~~~~l~s~s~D~------~v~iwd 193 (435)
T 4e54_B 131 HPSTVAVGSKG------GDIMLWNFGIK----DKPTFIK-GIGAGGSITGLKFNPLNTNQFYASSMEG------TTRLQD 193 (435)
T ss_dssp CTTCEEEEETT------SCEEEECSSCC----SCCEEEC-CCSSSCCCCEEEECSSCTTEEEEECSSS------CEEEEE
T ss_pred CCCEEEEEeCC------CEEEEEECCCC----CceeEEE-ccCCCCCEEEEEEeCCCCCEEEEEeCCC------EEEEee
Confidence 34677777752 34888888765 3222210 11111112223322 2456777777642 488889
Q ss_pred cccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 240 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 240 ~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
+++ .....+. . .. .......+.....++.+++.|+.++ .+.++|++
T Consensus 194 ~~~--~~~~~~~-----~-~~-~~~~~~~~~~~~~~~~~l~~g~~dg------~i~~wd~~ 239 (435)
T 4e54_B 194 FKG--NILRVFA-----S-SD-TINIWFCSLDVSASSRMVVTGDNVG------NVILLNMD 239 (435)
T ss_dssp TTS--CEEEEEE-----C-CS-SCSCCCCCEEEETTTTEEEEECSSS------BEEEEESS
T ss_pred ccC--CceeEEe-----c-cC-CCCccEEEEEECCCCCEEEEEeCCC------cEeeeccC
Confidence 887 6555542 0 11 1111112223336778888888765 47788876
No 107
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=55.37 E-value=1.6e+02 Score=28.81 Aligned_cols=129 Identities=11% Similarity=-0.008 Sum_probs=68.1
Q ss_pred cceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCC-------CcceeEEEECCEEEEEcCccCC
Q 016774 42 HSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSG-------RFGHTCVVIGDCLVLFGGINDR 114 (383)
Q Consensus 42 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~ 114 (383)
.+-++.++.||+... ...++.+|..+ ....|+.-....... ....+.++.+++||+....
T Consensus 60 ~~P~v~~g~vyv~~~-------~~~v~AlD~~t---G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d--- 126 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMS-------WSRVIAVDAAS---GKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD--- 126 (668)
T ss_dssp CCCEEETTEEEEEEG-------GGEEEEEETTT---CCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT---
T ss_pred cCCEEECCEEEEECC-------CCeEEEEECCC---ChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC---
Confidence 344567889888765 23567777643 334787643211110 1123445678888876421
Q ss_pred CCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCce
Q 016774 115 GNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSW 194 (383)
Q Consensus 115 ~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W 194 (383)
..++.+|.. +-+..|+.-.... ........+.+..++ .+|+..+. .+......++.||..++ +..|
T Consensus 127 ----g~l~alD~~-----tG~~~W~~~~~~~-~~~~~~~~~P~v~~~-~v~vg~~~-~~~~~~g~v~a~D~~tG--~~~W 192 (668)
T 1kv9_A 127 ----GRLIALDAK-----TGKAIWSQQTTDP-AKPYSITGAPRVVKG-KVIIGNGG-AEYGVRGFVSAYDADTG--KLAW 192 (668)
T ss_dssp ----SEEEEEETT-----TCCEEEEEECSCT-TSSCBCCSCCEEETT-EEEECCBC-TTTCCBCEEEEEETTTC--CEEE
T ss_pred ----CEEEEEECC-----CCCEeeeeccCCC-CCcceecCCCEEECC-EEEEeCCC-CCcCCCCEEEEEECCCC--cEEE
Confidence 358889872 1345688643211 111111223333444 77764322 11123467999999886 4467
Q ss_pred EEc
Q 016774 195 QQL 197 (383)
Q Consensus 195 ~~~ 197 (383)
+.-
T Consensus 193 ~~~ 195 (668)
T 1kv9_A 193 RFY 195 (668)
T ss_dssp EEE
T ss_pred Eec
Confidence 754
No 108
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=53.93 E-value=1.1e+02 Score=26.40 Aligned_cols=109 Identities=12% Similarity=0.077 Sum_probs=58.2
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccE
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDV 235 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v 235 (383)
++...+++.++.|+.+ ..+.++|+.++ +-...-. ... ....++..-.++.+++.|+.+. .|
T Consensus 170 ~~~spdg~~lasg~~d------g~i~iwd~~~~----~~~~~~~-~h~--~~v~~l~~spd~~~l~s~s~dg------~i 230 (321)
T 3ow8_A 170 IAYSPDGKYLASGAID------GIINIFDIATG----KLLHTLE-GHA--MPIRSLTFSPDSQLLVTASDDG------YI 230 (321)
T ss_dssp EEECTTSSEEEEEETT------SCEEEEETTTT----EEEEEEC-CCS--SCCCEEEECTTSCEEEEECTTS------CE
T ss_pred EEECCCCCEEEEEcCC------CeEEEEECCCC----cEEEEEc-ccC--CceeEEEEcCCCCEEEEEcCCC------eE
Confidence 3344555777777642 34888998876 3222111 111 1112333444567778877642 48
Q ss_pred EEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 236 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 236 ~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
.++|+.+ ......- ...... . .++....++.+++.|+.++ .+.++|+.
T Consensus 231 ~iwd~~~--~~~~~~~-------~~h~~~-v-~~~~~sp~~~~l~s~s~D~------~v~iwd~~ 278 (321)
T 3ow8_A 231 KIYDVQH--ANLAGTL-------SGHASW-V-LNVAFCPDDTHFVSSSSDK------SVKVWDVG 278 (321)
T ss_dssp EEEETTT--CCEEEEE-------CCCSSC-E-EEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred EEEECCC--cceeEEE-------cCCCCc-e-EEEEECCCCCEEEEEeCCC------cEEEEeCC
Confidence 8899877 4443321 111111 1 1222225677888887765 37788876
No 109
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=53.89 E-value=1e+02 Score=26.14 Aligned_cols=185 Identities=11% Similarity=0.026 Sum_probs=0.0
Q ss_pred CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEEC-CcEEEEEcccCCCCCcccce
Q 016774 102 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCID-NRKMVIHAGIGLYGLRLGDT 180 (383)
Q Consensus 102 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~ 180 (383)
.+.+++.|+.+. .+.++|+ ...+...... ......-.+++... ++.+++.|+.+.. +
T Consensus 108 ~~~~l~sgs~D~------~v~lWd~--------~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~l~sgs~D~~------v 165 (304)
T 2ynn_A 108 TKPYVLSGSDDL------TVKLWNW--------ENNWALEQTF--EGHEHFVMCVAFNPKDPSTFASGCLDRT------V 165 (304)
T ss_dssp SSSEEEEEETTS------CEEEEEG--------GGTTEEEEEE--CCCCSCEEEEEECTTCTTEEEEEETTSE------E
T ss_pred CCCEEEEECCCC------eEEEEEC--------CCCcchhhhh--cccCCcEEEEEECCCCCCEEEEEeCCCe------E
Q ss_pred EEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCC
Q 016774 181 WVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAG 260 (383)
Q Consensus 181 ~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~ 260 (383)
..+|+.+. .-.....................++.+++.|+.+. .|.++|+.+ .+-... -.
T Consensus 166 ~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~------~i~iWd~~~--~~~~~~--------~~ 225 (304)
T 2ynn_A 166 KVWSLGQS----TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL------TIKIWDYQT--KSCVAT--------LE 225 (304)
T ss_dssp EEEETTCS----SCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTS------EEEEEETTT--TEEEEE--------EE
T ss_pred EEEECCCC----CccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC------eEEEEeCCC--Ccccee--------eC
Q ss_pred CCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccccccccccccceeeccCCCCCCCccceee
Q 016774 261 FSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRA 340 (383)
Q Consensus 261 ~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~ 340 (383)
.........+.. .++.+++.|+.++. +.++|+. +.+-.+.-. ....+. ...
T Consensus 226 ~h~~~v~~~~~~-p~~~~l~s~s~Dg~------i~iWd~~------------------~~~~~~~~~---~~~~~~-~~~ 276 (304)
T 2ynn_A 226 GHMSNVSFAVFH-PTLPIIISGSEDGT------LKIWNSS------------------TYKVEKTLN---VGLERS-WCI 276 (304)
T ss_dssp CCSSCEEEEEEC-SSSSEEEEEETTSC------EEEEETT------------------TCCEEEEEC---CSSSSE-EEE
T ss_pred CCCCCEEEEEEC-CCCCEEEEEcCCCe------EEEEECC------------------CCceeeecc---CCCccE-EEE
Q ss_pred eecCCCcEEEEEcCccC
Q 016774 341 CPDYSGRYLYVFGGMVD 357 (383)
Q Consensus 341 ~~~~~~~~l~v~GG~~~ 357 (383)
+....+++.++..|..+
T Consensus 277 ~~~~~~~~~~~asg~~~ 293 (304)
T 2ynn_A 277 ATHPTGRKNYIASGFDN 293 (304)
T ss_dssp EECTTCGGGCEEEEETT
T ss_pred EECCCCCceEEEEecCC
No 110
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=53.55 E-value=1.6e+02 Score=28.21 Aligned_cols=132 Identities=14% Similarity=0.172 Sum_probs=70.2
Q ss_pred eeEEEECCEEEEEcCccCCCCCccceeeeec-ccccCCcccccEEEccCCCCCCC--c---cccceeEEECCcEEEEEcc
Q 016774 96 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQI-ACHENLGITLSWRLLDVGSIAPP--A---RGAHAACCIDNRKMVIHAG 169 (383)
Q Consensus 96 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~-~~~~~~~~~~~W~~~~~~~~~p~--~---r~~~~~~~~~~~~i~v~GG 169 (383)
.+-++.++.||+.... .+.++.+|. .. -+..|+.-........ . ......+ +.++++|+...
T Consensus 56 ~~P~v~~g~vyv~~~~------~~~v~AlD~~~t-----G~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~~ 123 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF------PNNTYALNLNDP-----GKIVWQHKPKQDASTKAVMCCDVVDRGLA-YGAGQIVKKQA 123 (571)
T ss_dssp SCCEEETTEEEEECST------TTCEEEEETTCT-----TSEEEEECCCCCGGGGGGCTTCSCCCCCE-EETTEEEEECT
T ss_pred cccEEECCEEEEEeCC------CCEEEEEeCCCC-----ccEEEEEcCCCCccccccccccccccccE-EECCEEEEEeC
Confidence 4456678999998752 135888887 31 3667987433210000 0 0111233 34548887532
Q ss_pred cCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEE
Q 016774 170 IGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQ 249 (383)
Q Consensus 170 ~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~ 249 (383)
-..++.+|..++ +..|+.-............+.++. ++.+|+-.+.. .......|+.||.+++...|+.
T Consensus 124 -------dg~l~alD~~tG--~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~-~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 124 -------NGHLLALDAKTG--KINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGA-ELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp -------TSEEEEEETTTC--CEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCG-GGTCCCEEEEEETTTCCEEEEE
T ss_pred -------CCEEEEEECCCC--CEEEEecCCCCCccceeccCCEEE-CCEEEEEecCC-ccCCCCEEEEEECCCCcEEEEE
Confidence 245899999876 446875431100000111222334 57776654321 1112346999999986678976
Q ss_pred e
Q 016774 250 I 250 (383)
Q Consensus 250 i 250 (383)
-
T Consensus 193 ~ 193 (571)
T 2ad6_A 193 F 193 (571)
T ss_dssp E
T ss_pred c
Confidence 5
No 111
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=53.42 E-value=1.7e+02 Score=28.54 Aligned_cols=117 Identities=15% Similarity=0.148 Sum_probs=61.3
Q ss_pred eeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCcccc
Q 016774 155 AACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLND 234 (383)
Q Consensus 155 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 234 (383)
......+++.+++...... ..+++|.++..+. .+..+... .. .....+.. ++.+|+....+ .....
T Consensus 231 ~~~~SpDG~~l~~~~~~~~--~~~~l~~~~~~~~----~~~~l~~~--~~--~~~~~~~~-~g~l~~~s~~~---~~~~~ 296 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRGW--SENDVYWKRPGEK----DFRLLVKG--VG--AKYEVHAW-KDRFYVLTDEG---APRQR 296 (695)
T ss_dssp EEEECTTSCCEEEEEEETT--TEEEEEEECTTCS----SCEEEEEC--SS--CCEEEEEE-TTEEEEEECTT---CTTCE
T ss_pred EEEECCCCCEEEEEEeCCC--CceEEEEEcCCCC----ceEEeecC--CC--ceEEEEec-CCcEEEEECCC---CCCCE
Confidence 3334444454444433221 3567888887766 78877621 11 11222223 45555553321 12346
Q ss_pred EEEEEcccCccc---eEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 235 VWFLDVYEGFFK---WVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 235 v~~~~~~~~~~~---W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
|+.+++++ .. |+.+. ...+.... ..... .++.+++....++ ...++.+++.
T Consensus 297 l~~~d~~~--~~~~~~~~l~-------~~~~~~~l-~~~~~-~~~~lv~~~~~dg----~~~l~~~~~~ 350 (695)
T 2bkl_A 297 VFEVDPAK--PARASWKEIV-------PEDSSASL-LSVSI-VGGHLSLEYLKDA----TSEVRVATLK 350 (695)
T ss_dssp EEEEBTTB--CSGGGCEEEE-------CCCSSCEE-EEEEE-ETTEEEEEEEETT----EEEEEEEETT
T ss_pred EEEEeCCC--CCccCCeEEe-------cCCCCCeE-EEEEE-ECCEEEEEEEECC----EEEEEEEeCC
Confidence 99999876 43 88873 11111112 22222 4788888776654 4468888864
No 112
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=52.38 E-value=1.8e+02 Score=28.58 Aligned_cols=110 Identities=9% Similarity=-0.014 Sum_probs=54.8
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcc-cCCCCCCCCCceEEEEc-CCEEEEEcccCCCCCccc
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLV-THPSPPARSGHSLTRIG-GNRTVLFGGRGVGYEVLN 233 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~-~~~~p~~r~~~~~~~~~-~~~i~v~GG~~~~~~~~~ 233 (383)
++...++..++.|+.+ ..+.++|++++ |.... ..... ....++.... ++.+++.|+.+.
T Consensus 103 ~~~s~~~~~l~~~~~d------g~i~vw~~~~~-----~~~~~~~~~~~--~~v~~~~~~p~~~~~l~~~~~dg------ 163 (814)
T 3mkq_A 103 IAVHPTKPYVLSGSDD------LTVKLWNWENN-----WALEQTFEGHE--HFVMCVAFNPKDPSTFASGCLDR------ 163 (814)
T ss_dssp EEECSSSSEEEEEETT------SEEEEEEGGGT-----SEEEEEEECCS--SCEEEEEEETTEEEEEEEEETTS------
T ss_pred EEEeCCCCEEEEEcCC------CEEEEEECCCC-----ceEEEEEcCCC--CcEEEEEEEcCCCCEEEEEeCCC------
Confidence 3334455566666532 35788888763 33222 10111 1112233332 356777777642
Q ss_pred cEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEc--CCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 234 DVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLIL--GGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 234 ~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~--~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
.|.++|+.+........ .....+. .+..... ++.+++.|+.++ .+.++|+.
T Consensus 164 ~v~vwd~~~~~~~~~~~--------~~~~~~v--~~~~~~~~~~~~~l~~~~~dg------~i~~~d~~ 216 (814)
T 3mkq_A 164 TVKVWSLGQSTPNFTLT--------TGQERGV--NYVDYYPLPDKPYMITASDDL------TIKIWDYQ 216 (814)
T ss_dssp EEEEEETTCSSCSEEEE--------CCCTTCC--CEEEECCSTTCCEEEEECTTS------EEEEEETT
T ss_pred eEEEEECCCCcceeEEe--------cCCCCCE--EEEEEEECCCCCEEEEEeCCC------EEEEEECC
Confidence 58899987622223222 1111111 1222223 677888887754 47888876
No 113
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=52.00 E-value=1.7e+02 Score=28.26 Aligned_cols=149 Identities=11% Similarity=0.020 Sum_probs=70.9
Q ss_pred ccceeeeecccccCCcccc-cEEEccCCCCCCCcc-ccceeEEEC--CcEEEEEcccCCCCCcccceEEEeccCCcccCc
Q 016774 118 HNDTWIGQIACHENLGITL-SWRLLDVGSIAPPAR-GAHAACCID--NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGS 193 (383)
Q Consensus 118 ~~~~~~~d~~~~~~~~~~~-~W~~~~~~~~~p~~r-~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~ 193 (383)
...++++|+ .+. ....+.... ..... .....+... ++++++.+..+ + ...+|.++...+ .
T Consensus 283 ~~~v~~~d~-------~~g~~~~~~~~~~-~~~~~~~~~~~~~sp~~dg~~l~~~~~~--g--~~~l~~~~~~~~----~ 346 (706)
T 2z3z_A 283 ECKVNAYDA-------ETGRFVRTLFVET-DKHYVEPLHPLTFLPGSNNQFIWQSRRD--G--WNHLYLYDTTGR----L 346 (706)
T ss_dssp EEEEEEEET-------TTCCEEEEEEEEE-CSSCCCCCSCCEECTTCSSEEEEEECTT--S--SCEEEEEETTSC----E
T ss_pred eeEEEEEEC-------CCCceeeEEEEcc-CCCeECccCCceeecCCCCEEEEEEccC--C--ccEEEEEECCCC----E
Confidence 456888888 354 454443211 00000 012234444 55655555432 2 356888887665 5
Q ss_pred eEEcccCCCCCCCCCceEEEE-cCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEE
Q 016774 194 WQQLVTHPSPPARSGHSLTRI-GGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATL 272 (383)
Q Consensus 194 W~~~~~~~~p~~r~~~~~~~~-~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~ 272 (383)
...+... .... .....+ .+++.+++.+.. .......||.+|+.+ ...+.+. .... .++...
T Consensus 347 ~~~l~~~--~~~v--~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~--~~~~~l~----------~~~~-~~~~~~ 408 (706)
T 2z3z_A 347 IRQVTKG--EWEV--TNFAGFDPKGTRLYFESTE-ASPLERHFYCIDIKG--GKTKDLT----------PESG-MHRTQL 408 (706)
T ss_dssp EEECCCS--SSCE--EEEEEECTTSSEEEEEESS-SCTTCBEEEEEETTC--CCCEESC----------CSSS-EEEEEE
T ss_pred EEecCCC--CeEE--EeeeEEcCCCCEEEEEecC-CCCceEEEEEEEcCC--CCceecc----------CCCc-eEEEEE
Confidence 5655421 1111 111222 234334443332 111234689999887 6666662 1111 233333
Q ss_pred EcCCEEEEEcCcCCCCCCCCcEEEEEcCCC
Q 016774 273 ILGGRVLIYGGEDSARRRKDDFWVLDTKAI 302 (383)
Q Consensus 273 ~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~ 302 (383)
..+++.+++...+. ....+++.+|+++.
T Consensus 409 spdg~~l~~~~~~~--~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 409 SPDGSAIIDIFQSP--TVPRKVTVTNIGKG 436 (706)
T ss_dssp CTTSSEEEEEEECS--SCSCEEEEEESSSC
T ss_pred CCCCCEEEEEecCC--CCCcEEEEEECCCC
Confidence 35666666654332 12456888887643
No 114
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=51.86 E-value=1e+02 Score=26.10 Aligned_cols=49 Identities=16% Similarity=0.029 Sum_probs=26.0
Q ss_pred cceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCc-EEEEEcccCCCCCcccceEEEeccCC
Q 016774 119 NDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNR-KMVIHAGIGLYGLRLGDTWVLELSEN 188 (383)
Q Consensus 119 ~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~d~~~~ 188 (383)
+.++++|+ .+.+.......+ ...+.++...++ .+|+.+ ..++++|+.+.
T Consensus 115 ~~i~v~d~-------~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~---------~~i~~~d~~~~ 164 (337)
T 1pby_B 115 TRVALYDA-------ETLSRRKAFEAP-----RQITMLAWARDGSKLYGLG---------RDLHVMDPEAG 164 (337)
T ss_dssp CEEEEEET-------TTTEEEEEEECC-----SSCCCEEECTTSSCEEEES---------SSEEEEETTTT
T ss_pred ceEEEEEC-------CCCcEEEEEeCC-----CCcceeEECCCCCEEEEeC---------CeEEEEECCCC
Confidence 56889998 344433221111 112233443343 466652 35899999876
No 115
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=51.82 E-value=1.3e+02 Score=26.65 Aligned_cols=104 Identities=11% Similarity=0.020 Sum_probs=53.4
Q ss_pred CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceE
Q 016774 102 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTW 181 (383)
Q Consensus 102 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~ 181 (383)
+++.++.|+.+. .+.++|+ .+..-..... .....-.+++...++.+++.|+.+ ..+.
T Consensus 108 ~~~~l~~~~~dg------~i~iwd~-------~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~s~d------~~i~ 164 (420)
T 3vl1_A 108 QMRRFILGTTEG------DIKVLDS-------NFNLQREIDQ----AHVSEITKLKFFPSGEALISSSQD------MQLK 164 (420)
T ss_dssp SSCEEEEEETTS------CEEEECT-------TSCEEEEETT----SSSSCEEEEEECTTSSEEEEEETT------SEEE
T ss_pred CCCEEEEEECCC------CEEEEeC-------CCcceeeecc----cccCccEEEEECCCCCEEEEEeCC------CeEE
Confidence 445777776532 4778887 2333322211 111222234444455677777642 3588
Q ss_pred EEeccCCcccCceE-EcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEccc
Q 016774 182 VLELSENFCFGSWQ-QLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE 242 (383)
Q Consensus 182 ~~d~~~~~~~~~W~-~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~ 242 (383)
++|+.+. +-. .+. . ......++....++..++.|+.+. .|.++|+.+
T Consensus 165 iwd~~~~----~~~~~~~--~--h~~~v~~~~~~~~~~~l~s~~~d~------~v~iwd~~~ 212 (420)
T 3vl1_A 165 IWSVKDG----SNPRTLI--G--HRATVTDIAIIDRGRNVLSASLDG------TIRLWECGT 212 (420)
T ss_dssp EEETTTC----CCCEEEE--C--CSSCEEEEEEETTTTEEEEEETTS------CEEEEETTT
T ss_pred EEeCCCC----cCceEEc--C--CCCcEEEEEEcCCCCEEEEEcCCC------cEEEeECCC
Confidence 8898765 211 111 1 111122334444566777777642 488888876
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=51.25 E-value=1.4e+02 Score=26.87 Aligned_cols=147 Identities=10% Similarity=0.107 Sum_probs=70.7
Q ss_pred EEECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCccc
Q 016774 99 VVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLG 178 (383)
Q Consensus 99 ~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~ 178 (383)
..+++.+++.|+.+. .+.++|+. +.+...... + ....-.++...+ ..++.|+.+ .
T Consensus 179 l~~~~~~l~sg~~dg------~i~vwd~~-------~~~~~~~~~-~----h~~~v~~l~~~~-~~l~s~s~d------g 233 (435)
T 1p22_A 179 LQYDERVIITGSSDS------TVRVWDVN-------TGEMLNTLI-H----HCEAVLHLRFNN-GMMVTCSKD------R 233 (435)
T ss_dssp EECCSSEEEEEETTS------CEEEEESS-------SCCEEEEEC-C----CCSCEEEEECCT-TEEEEEETT------S
T ss_pred EEECCCEEEEEcCCC------eEEEEECC-------CCcEEEEEc-C----CCCcEEEEEEcC-CEEEEeeCC------C
Confidence 334666777777532 47788873 333222111 1 011112222344 466666642 3
Q ss_pred ceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCC
Q 016774 179 DTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIP 258 (383)
Q Consensus 179 ~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~ 258 (383)
.+..+|+.+. .-..... ........-.++.. ++..++.|+.+ ..|.++|+.+ .+-...-
T Consensus 234 ~i~vwd~~~~----~~~~~~~-~~~~~~~~v~~~~~-~~~~l~s~~~d------g~i~vwd~~~--~~~~~~~------- 292 (435)
T 1p22_A 234 SIAVWDMASP----TDITLRR-VLVGHRAAVNVVDF-DDKYIVSASGD------RTIKVWNTST--CEFVRTL------- 292 (435)
T ss_dssp CEEEEECSSS----SCCEEEE-EECCCSSCEEEEEE-ETTEEEEEETT------SEEEEEETTT--CCEEEEE-------
T ss_pred cEEEEeCCCC----CCceeee-EecCCCCcEEEEEe-CCCEEEEEeCC------CeEEEEECCc--CcEEEEE-------
Confidence 4788888765 2111100 00111112233444 35566676653 2588999887 4332221
Q ss_pred CCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 259 AGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 259 ~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.....+ ..++. .++.+++.|+.++ .+.++|+.+
T Consensus 293 ~~~~~~---v~~~~-~~~~~l~~g~~dg------~i~iwd~~~ 325 (435)
T 1p22_A 293 NGHKRG---IACLQ-YRDRLVVSGSSDN------TIRLWDIEC 325 (435)
T ss_dssp ECCSSC---EEEEE-EETTEEEEEETTS------CEEEEETTT
T ss_pred cCCCCc---EEEEE-eCCCEEEEEeCCC------eEEEEECCC
Confidence 111111 12222 3566777887654 478889873
No 117
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=51.12 E-value=1.3e+02 Score=26.36 Aligned_cols=56 Identities=11% Similarity=0.131 Sum_probs=31.3
Q ss_pred ccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEc-CCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 233 NDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLIL-GGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 233 ~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~-~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
..|+.+|+.+ .+-+.+. . ......+.... . +++.+++............+|.+|++
T Consensus 168 ~~l~~~d~~~--g~~~~l~-------~--~~~~~~~~~~s-p~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (388)
T 3pe7_A 168 CRLMRVDLKT--GESTVIL-------Q--ENQWLGHPIYR-PYDDSTVAFCHEGPHDLVDARMWLINED 224 (388)
T ss_dssp EEEEEEETTT--CCEEEEE-------E--ESSCEEEEEEE-TTEEEEEEEEECSCTTTSSCSEEEEETT
T ss_pred ceEEEEECCC--CceEEee-------c--CCccccccEEC-CCCCCEEEEEEecCCCCCcceEEEEeCC
Confidence 5799999988 6655552 1 11122333332 5 66655554433222235689999986
No 118
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=50.27 E-value=1.4e+02 Score=26.69 Aligned_cols=135 Identities=15% Similarity=0.092 Sum_probs=65.7
Q ss_pred ceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEccc
Q 016774 120 DTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVT 199 (383)
Q Consensus 120 ~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~ 199 (383)
.|+++|. .+.+..++.... .....-.+++...++..++.|+.+ ..+.++|+.++ +-....
T Consensus 126 tV~lWd~-------~tg~~~~~~~~~--~~~~~V~sv~fspdg~~lasgs~D------g~v~iWd~~~~----~~~~~~- 185 (420)
T 4gga_A 126 SVYLWSA-------SSGDILQLLQME--QPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQ----KRLRNM- 185 (420)
T ss_dssp EEEEEET-------TTCCEEEEEECC--STTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTT----EEEEEE-
T ss_pred EEEEEEC-------CCCCEEEEEEec--CCCCcEEEEEECCCCCEEEEEECC------CeEEEEEcCCC----cEEEEE-
Confidence 5888888 465554432211 011112233344566777787752 34888898876 322221
Q ss_pred CCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEE
Q 016774 200 HPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVL 279 (383)
Q Consensus 200 ~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~ 279 (383)
.....+ ..++.. ++.+++.|+.+. .+..+|... ........ ...... . .......++..+
T Consensus 186 -~~h~~~--v~~~s~-~~~~l~sgs~d~------~i~~~d~~~--~~~~~~~~------~~h~~~-~-~~~~~~~~g~~l 245 (420)
T 4gga_A 186 -TSHSAR--VGSLSW-NSYILSSGSRSG------HIHHHDVRV--AEHHVATL------SGHSQE-V-CGLRWAPDGRHL 245 (420)
T ss_dssp -CCCSSC--EEEEEE-ETTEEEEEETTS------EEEEEETTS--SSCEEEEE------ECCSSC-E-EEEEECTTSSEE
T ss_pred -eCCCCc--eEEEee-CCCEEEEEeCCC------ceeEeeecc--cceeeEEe------cccccc-e-eeeeecCCCCee
Confidence 111112 223444 466777777642 467777665 32222110 111111 1 122222566777
Q ss_pred EEcCcCCCCCCCCcEEEEEcC
Q 016774 280 IYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 280 i~GG~~~~~~~~~~~~~~d~~ 300 (383)
+.|+.++ .+.+++..
T Consensus 246 ~s~~~D~------~v~i~~~~ 260 (420)
T 4gga_A 246 ASGGNDN------LVNVWPSA 260 (420)
T ss_dssp EEEETTS------CEEEEESS
T ss_pred eeeeccc------cceEEeec
Confidence 7777654 36677765
No 119
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=49.86 E-value=1.2e+02 Score=25.72 Aligned_cols=61 Identities=13% Similarity=0.099 Sum_probs=33.2
Q ss_pred EEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEccc
Q 016774 163 KMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE 242 (383)
Q Consensus 163 ~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~ 242 (383)
.+++.|+.+ ..+..+|+.+. +...... . ......++..-.++.+++.|+.+. .|.++|+.+
T Consensus 186 ~~~~s~~~d------~~i~i~d~~~~----~~~~~~~-~--h~~~v~~~~~s~~~~~l~s~s~Dg------~i~iwd~~~ 246 (340)
T 4aow_A 186 PIIVSCGWD------KLVKVWNLANC----KLKTNHI-G--HTGYLNTVTVSPDGSLCASGGKDG------QAMLWDLNE 246 (340)
T ss_dssp CEEEEEETT------SCEEEEETTTT----EEEEEEC-C--CSSCEEEEEECTTSSEEEEEETTC------EEEEEETTT
T ss_pred cEEEEEcCC------CEEEEEECCCC----ceeeEec-C--CCCcEEEEEECCCCCEEEEEeCCC------eEEEEEecc
Confidence 456666542 24778888875 3322211 1 111122333334567888887642 588888876
No 120
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=49.01 E-value=1.3e+02 Score=26.12 Aligned_cols=51 Identities=14% Similarity=0.141 Sum_probs=28.5
Q ss_pred cEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 234 DVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 234 ~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.+.+||+.+ ..-...- .. ...... ++....++.+++.|+.++ .+.++|+++
T Consensus 315 ~i~v~d~~~--~~~~~~~-------~~-~~~~v~-~~~~s~~~~~l~s~~~dg------~i~iw~~~~ 365 (408)
T 4a11_B 315 TIAVYTVYS--GEQITML-------KG-HYKTVD-CCVFQSNFQELYSGSRDC------NILAWVPSL 365 (408)
T ss_dssp EEEEEETTT--CCEEEEE-------CC-CSSCEE-EEEEETTTTEEEEEETTS------CEEEEEECC
T ss_pred EEEEEECcC--Ccceeee-------cc-CCCeEE-EEEEcCCCCEEEEECCCC------eEEEEeCCC
Confidence 588999877 4332221 11 111222 223236778888888765 377777763
No 121
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=48.68 E-value=1.4e+02 Score=26.18 Aligned_cols=108 Identities=14% Similarity=0.020 Sum_probs=54.4
Q ss_pred eeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCcccc
Q 016774 155 AACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLND 234 (383)
Q Consensus 155 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 234 (383)
++....++ .++.|+. -..+..||+.+. +-...- . .......++....++.+++.|+.+. .
T Consensus 211 ~~~~~~~~-~~~~~~~------~g~i~~~d~~~~----~~~~~~--~-~~~~~i~~~~~~~~~~~l~~~~~d~------~ 270 (425)
T 1r5m_A 211 DVEWVDDD-KFVIPGP------KGAIFVYQITEK----TPTGKL--I-GHHGPISVLEFNDTNKLLLSASDDG------T 270 (425)
T ss_dssp CCEEEETT-EEEEECG------GGCEEEEETTCS----SCSEEE--C-CCSSCEEEEEEETTTTEEEEEETTS------C
T ss_pred EEEEcCCC-EEEEEcC------CCeEEEEEcCCC----ceeeee--c-cCCCceEEEEECCCCCEEEEEcCCC------E
Confidence 34444453 4566654 246899998875 221111 1 1111223344444566777777532 4
Q ss_pred EEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 235 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 235 v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
+.+||+.+ .+-...- ..... . -.++....++ +++.|+.++ .+.++|+.
T Consensus 271 i~i~d~~~--~~~~~~~-------~~~~~-~-i~~~~~~~~~-~l~~~~~d~------~i~i~d~~ 318 (425)
T 1r5m_A 271 LRIWHGGN--GNSQNCF-------YGHSQ-S-IVSASWVGDD-KVISCSMDG------SVRLWSLK 318 (425)
T ss_dssp EEEECSSS--BSCSEEE-------CCCSS-C-EEEEEEETTT-EEEEEETTS------EEEEEETT
T ss_pred EEEEECCC--CccceEe-------cCCCc-c-EEEEEECCCC-EEEEEeCCC------cEEEEECC
Confidence 88899876 4322221 11111 1 1223332455 677776654 48889986
No 122
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=48.46 E-value=2e+02 Score=28.01 Aligned_cols=103 Identities=12% Similarity=0.134 Sum_probs=55.5
Q ss_pred ccceEEEeccC------CcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCc-cceEE
Q 016774 177 LGDTWVLELSE------NFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGF-FKWVQ 249 (383)
Q Consensus 177 ~~~~~~~d~~~------~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~-~~W~~ 249 (383)
.+++|.+|+.+ . ...+..+.. .... ........++.|++.+..+ .....|+.+++.+.. ..|+.
T Consensus 258 ~~~l~~~d~~~~~~~~~~--~~~~~~l~~--~~~~--~~~~~s~dg~~l~~~s~~~---~~~~~l~~~d~~~~~~~~~~~ 328 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITG--ILKWVKLID--NFEG--EYDYVTNEGTVFTFKTNRH---SPNYRLINIDFTDPEESKWKV 328 (710)
T ss_dssp CCEEEEEEGGGSSSSSCS--SCCCEEEEC--SSSS--CEEEEEEETTEEEEEECTT---CTTCEEEEEETTSCCGGGCEE
T ss_pred ccEEEEEECcccccccCC--ccceEEeeC--CCCc--EEEEEeccCCEEEEEECCC---CCCCEEEEEeCCCCCccccee
Confidence 46899999876 2 113666651 1111 1122333357777776542 123469999987611 15888
Q ss_pred ecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 250 IPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 250 i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
+. ...+.... .......++.+++....++ ...++++|+.
T Consensus 329 l~-------~~~~~~~~-~~~~~~~~~~lv~~~~~~g----~~~l~~~~~~ 367 (710)
T 2xdw_A 329 LV-------PEHEKDVL-EWVACVRSNFLVLCYLHDV----KNTLQLHDLA 367 (710)
T ss_dssp EE-------CCCSSCEE-EEEEEETTTEEEEEEEETT----EEEEEEEETT
T ss_pred cc-------CCCCCCeE-EEEEEEcCCEEEEEEEECC----EEEEEEEECC
Confidence 74 11111112 2222224777877766554 4468889874
No 123
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=47.51 E-value=2e+02 Score=27.72 Aligned_cols=131 Identities=9% Similarity=0.052 Sum_probs=66.4
Q ss_pred cceeeeCCEEEEEccccCCCCCCCceEEEEe-ccCcccccceEEcCCCCCC----C---CcceeEEE--ECCE----EEE
Q 016774 42 HSLNFVSNCLVLFGGGCEGGRHLDDTWVAYV-GNDFQGMLKWQKVNSGIPS----G---RFGHTCVV--IGDC----LVL 107 (383)
Q Consensus 42 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~-~~~~~~~~~W~~~~~~~p~----~---r~~~~~~~--~~~~----iyv 107 (383)
.+-++.++.||+.+.. ...++.+|. .+ ....|+.-...... . ....+.++ .+++ ||+
T Consensus 56 ~tP~v~~g~vyv~~~~------~~~v~AlD~~~t---G~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v 126 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF------PNNTFALGLDDP---GTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILK 126 (599)
T ss_dssp SCCEEETTEEEEECST------TTCEEEEETTCT---TSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEE
T ss_pred eccEEECCEEEEEeCC------CCEEEEEeCCCC---CcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEE
Confidence 4445678899988652 246777877 44 34488864322111 1 11223444 4666 777
Q ss_pred EcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccC
Q 016774 108 FGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSE 187 (383)
Q Consensus 108 ~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~ 187 (383)
... ...++.+|.. +-+..|+.-.... .+......+.++.++ .+|+-.+.... .....++.||.++
T Consensus 127 ~t~-------dg~l~AlDa~-----TG~~~W~~~~~~~-~~~~~~~ssP~v~~g-~V~vg~~g~e~-g~~g~v~A~D~~T 191 (599)
T 1w6s_A 127 TQL-------DGNVAALNAE-----TGETVWKVENSDI-KVGSTLTIAPYVVKD-KVIIGSSGAEL-GVRGYLTAYDVKT 191 (599)
T ss_dssp ECT-------TSEEEEEETT-----TCCEEEEEECCCG-GGTCBCCSCCEEETT-EEEECCBCGGG-TCCCEEEEEETTT
T ss_pred EcC-------CCEEEEEECC-----CCCEEEeecCCCC-CccceeecCCEEECC-EEEEEeccccc-CCCCeEEEEECCC
Confidence 532 1258888872 1245688642210 000011222333444 77664321111 1245789999987
Q ss_pred CcccCceEEcc
Q 016774 188 NFCFGSWQQLV 198 (383)
Q Consensus 188 ~~~~~~W~~~~ 198 (383)
+ +..|+.-.
T Consensus 192 G--~~~W~~~~ 200 (599)
T 1w6s_A 192 G--EQVWRAYA 200 (599)
T ss_dssp C--CEEEEEES
T ss_pred C--cEEEEEcC
Confidence 6 34576554
No 124
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=47.44 E-value=2e+02 Score=27.55 Aligned_cols=187 Identities=13% Similarity=0.068 Sum_probs=84.9
Q ss_pred CCCCcceeEEEECC--EEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCC-CCCCCccccceeEEEC-CcEEE
Q 016774 90 PSGRFGHTCVVIGD--CLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVG-SIAPPARGAHAACCID-NRKMV 165 (383)
Q Consensus 90 p~~r~~~~~~~~~~--~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~-~~~p~~r~~~~~~~~~-~~~i~ 165 (383)
+..+.-|......+ .+|+.... .+.+.++|+ ++.+-...... +..|.|..+.. .... .+.+|
T Consensus 339 ~~~~~~~d~~~~pdgr~~~va~~~------sn~V~ViD~-------~t~kl~~~i~vgg~~Phpg~g~~-~~~p~~g~v~ 404 (567)
T 1qks_A 339 SAERFLHDGGLDGSHRYFITAANA------RNKLVVIDT-------KEGKLVAIEDTGGQTPHPGRGAN-FVHPTFGPVW 404 (567)
T ss_dssp ECCSSEEEEEECTTSCEEEEEEGG------GTEEEEEET-------TTTEEEEEEECSSSSBCCTTCEE-EEETTTEEEE
T ss_pred eccccccCceECCCCCEEEEEeCC------CCeEEEEEC-------CCCcEEEEEeccCcCCCCcccee-eECCCCCcEE
Confidence 33555555554432 34444322 345888998 35443322233 33555432322 2233 35677
Q ss_pred EEcccCCCCCcccceEEEeccCCc-ccCceEEcccCCCCCCCCCceEEEEcC-CEEEEEcccCCCCCccccEEEEEcccC
Q 016774 166 IHAGIGLYGLRLGDTWVLELSENF-CFGSWQQLVTHPSPPARSGHSLTRIGG-NRTVLFGGRGVGYEVLNDVWFLDVYEG 243 (383)
Q Consensus 166 v~GG~~~~~~~~~~~~~~d~~~~~-~~~~W~~~~~~~~p~~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~~v~~~~~~~~ 243 (383)
+.+-.. .+.+-.+|.++.. ....|+.+..-....... ..+....+ ..+|+---.+......+.|.+||+.+.
T Consensus 405 ~t~~~g-----~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~-~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 405 ATSHMG-----DDSVALIGTDPEGHPDNAWKILDSFPALGGGS-LFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEBSS-----SSEEEEEECCTTTCTTTBTSEEEEEECSCSCC-CCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EeCCCC-----CCeEEEecCCCCCCccccCEEEEEEecCCCCC-EEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 765321 1347788877630 011377665111111111 11222222 457775432222224567999999871
Q ss_pred -----ccceEEecccccCCCCCCC--CCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 244 -----FFKWVQIPYELQNIPAGFS--LPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 244 -----~~~W~~i~~~~~~~~~~~p--~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
...++.+++.. ...++ ..|..|....-.++.+|+--+ ++ ....+.+.++|.++
T Consensus 479 ~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~G~~~~~s~~-~~-~~~~~~i~v~D~~t 538 (567)
T 1qks_A 479 TGDGSDPEFKTLPIAE---WAGITEGQPRVVQGEFNKDGTEVWFSVW-NG-KDQESALVVVDDKT 538 (567)
T ss_dssp CCSSSCCCEEEECHHH---HHTCCSSCCEEEEEEECTTSSEEEEEEE-CC-TTSCCEEEEEETTT
T ss_pred cccccCCCcEEecccc---ccccCCCCcceEeeeECCCCCEEEEEee-cC-CCCCCcEEEEECCC
Confidence 11234442100 00111 235555444313456776522 11 11256799999873
No 125
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=44.96 E-value=1.7e+02 Score=26.16 Aligned_cols=17 Identities=18% Similarity=0.317 Sum_probs=14.1
Q ss_pred cceeEEECCcEEEEEcc
Q 016774 153 AHAACCIDNRKMVIHAG 169 (383)
Q Consensus 153 ~~~~~~~~~~~i~v~GG 169 (383)
.|+++...++.+|.+|-
T Consensus 223 ~~t~~l~~~G~v~~wG~ 239 (389)
T 3kci_A 223 AQTLCLTDDDTVWSWGD 239 (389)
T ss_dssp CEEEEEETTTEEEEEEC
T ss_pred cEEEEEccCCEEEEEeC
Confidence 67788888889999984
No 126
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=43.87 E-value=1.5e+02 Score=25.25 Aligned_cols=108 Identities=12% Similarity=-0.003 Sum_probs=55.6
Q ss_pred cEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEc-CCEEEEEcccCCCCCccccEEEEEc
Q 016774 162 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG-GNRTVLFGGRGVGYEVLNDVWFLDV 240 (383)
Q Consensus 162 ~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~-~~~i~v~GG~~~~~~~~~~v~~~~~ 240 (383)
+.+++.|+.+ ..+.++|+.+. +-...-. .. .....++.... ++.+++.|+.+. .|.++|+
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~----~~~~~~~-~~--~~~i~~~~~~~~~~~~l~s~~~dg------~i~iwd~ 145 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITM----QCIKHYV-GH--GNAINELKFHPRDPNLLLSVSKDH------ALRLWNI 145 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTC----CEEEEEE-SC--CSCEEEEEECSSCTTEEEEEETTS------CEEEEET
T ss_pred CCEEEEecCC------CEEEEEEchhc----eEeeeec-CC--CCcEEEEEECCCCCCEEEEEeCCC------eEEEEEe
Confidence 4677777642 35888888765 3222111 11 11122233333 466777877632 4899999
Q ss_pred ccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCC
Q 016774 241 YEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 302 (383)
Q Consensus 241 ~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~ 302 (383)
.+ .+-...- .........-.++....++..++.|+.++ .+.++|+.+.
T Consensus 146 ~~--~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~ 193 (366)
T 3k26_A 146 QT--DTLVAIF------GGVEGHRDEVLSADYDLLGEKIMSCGMDH------SLKLWRINSK 193 (366)
T ss_dssp TT--TEEEEEE------CSTTSCSSCEEEEEECTTSSEEEEEETTS------CEEEEESCSH
T ss_pred ec--CeEEEEe------cccccccCceeEEEECCCCCEEEEecCCC------CEEEEECCCC
Confidence 87 4433321 00001111112223225677788887754 4788888743
No 127
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=43.34 E-value=1.5e+02 Score=25.03 Aligned_cols=114 Identities=18% Similarity=0.172 Sum_probs=52.3
Q ss_pred EEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEE
Q 016774 157 CCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVW 236 (383)
Q Consensus 157 ~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~ 236 (383)
+...++.+++.|+.+ ..+.++|+.+. ..+...... ... ..+....+..++.++.+ ..|.
T Consensus 222 ~~s~~~~~l~s~s~D------g~i~iwd~~~~------~~~~~~~~~--~~v-~~~~~~~~~~~~~~~~d------~~i~ 280 (340)
T 4aow_A 222 TVSPDGSLCASGGKD------GQAMLWDLNEG------KHLYTLDGG--DII-NALCFSPNRYWLCAATG------PSIK 280 (340)
T ss_dssp EECTTSSEEEEEETT------CEEEEEETTTT------EEEEEEECS--SCE-EEEEECSSSSEEEEEET------TEEE
T ss_pred EECCCCCEEEEEeCC------CeEEEEEeccC------ceeeeecCC--ceE-EeeecCCCCceeeccCC------CEEE
Confidence 334455777777752 34778888765 233200111 111 22333334455566653 2478
Q ss_pred EEEcccCccceE-EecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 237 FLDVYEGFFKWV-QIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 237 ~~~~~~~~~~W~-~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
++|+++ ..-. .+................ .++....++.+++.||.++ .+.++|++
T Consensus 281 iwd~~~--~~~~~~~~~~~~~~~~~~h~~~v-~~l~~s~dg~~l~sgs~Dg------~v~iW~~~ 336 (340)
T 4aow_A 281 IWDLEG--KIIVDELKQEVISTSSKAEPPQC-TSLAWSADGQTLFAGYTDN------LVRVWQVT 336 (340)
T ss_dssp EEETTT--TEEEEEECCC-------CCCCCE-EEEEECTTSSEEEEEETTS------CEEEEEEE
T ss_pred EEECCC--CeEEEeccccceeeeccCCCCCE-EEEEECCCCCEEEEEeCCC------EEEEEeCC
Confidence 888876 3321 111000000000011111 1222225677888888765 36677765
No 128
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=42.99 E-value=1.9e+02 Score=26.09 Aligned_cols=66 Identities=12% Similarity=0.011 Sum_probs=34.1
Q ss_pred ccceeEEECCcEEEEEcccCCCCCc----ccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcc
Q 016774 152 GAHAACCIDNRKMVIHAGIGLYGLR----LGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGG 224 (383)
Q Consensus 152 ~~~~~~~~~~~~i~v~GG~~~~~~~----~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG 224 (383)
..|+++...++.+|.+|-- ..++. ..+................++. .-..|+++...++.+|..|-
T Consensus 130 ~~h~~alt~~G~v~~wG~n-~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va------~G~~hs~alt~~G~v~~wG~ 199 (406)
T 4d9s_A 130 DSHCLAVTMEGEVQSWGRN-QNGQLGLGDTEDSLVPQKIQAFEGIRIKMVA------AGAEHTAAVTEDGDLYGWGW 199 (406)
T ss_dssp SSEEEEEETTSCEEEEECC-TTSTTCSSSCCCEEEEEECGGGTTCCEEEEE------ECSSEEEEEETTSCEEEEEC
T ss_pred hhheEEEcCCCcEEEeCCC-CCccCCCCCCCCcccceEecccCCCcEEEEe------cCCCeEEEEeCCCCEEEeeC
Confidence 4788888888899999843 22211 1111111000000001222222 23458888887889999984
No 129
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=41.42 E-value=2e+02 Score=25.83 Aligned_cols=113 Identities=12% Similarity=0.138 Sum_probs=56.4
Q ss_pred EEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEccc
Q 016774 163 KMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE 242 (383)
Q Consensus 163 ~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~ 242 (383)
..++.|+.+ ..+..+|+.+. +-...-..... ....-.++.. ++.+++.|+.+ ..|.+||+.+
T Consensus 330 ~~l~~~~~d------g~i~vwd~~~~----~~~~~~~~~~~-~~~~v~~~~~-~~~~l~s~~~d------g~v~iwd~~~ 391 (445)
T 2ovr_B 330 NILVSGNAD------STVKIWDIKTG----QCLQTLQGPNK-HQSAVTCLQF-NKNFVITSSDD------GTVKLWDLKT 391 (445)
T ss_dssp TEEEEEETT------SCEEEEETTTC----CEEEEECSTTS-CSSCEEEEEE-CSSEEEEEETT------SEEEEEETTT
T ss_pred CEEEEEeCC------CeEEEEECCCC----cEEEEEccCCC-CCCCEEEEEE-CCCEEEEEeCC------CeEEEEECCC
Confidence 466666642 35888998775 32222111111 1122233445 46677777764 2588999987
Q ss_pred CccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 243 GFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 243 ~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.+....-. ........... .+.....++.+++.|+.++.. ...+.++|++.
T Consensus 392 --~~~~~~~~---~~~~~~~~~~v-~~~~~s~~~~~la~~~~dg~~--~~~l~v~df~~ 442 (445)
T 2ovr_B 392 --GEFIRNLV---TLESGGSGGVV-WRIRASNTKLVCAVGSRNGTE--ETKLLVLDFDV 442 (445)
T ss_dssp --CCEEEEEE---ECTTGGGTCEE-EEEEECSSEEEEEEECSSSSS--CCEEEEEECCC
T ss_pred --Cceeeeee---ccccCCCCceE-EEEEecCCEEEEEEcccCCCC--ccEEEEEECCC
Confidence 54432210 00000111111 222222566777888887642 34588888763
No 130
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=40.80 E-value=1.6e+02 Score=24.76 Aligned_cols=66 Identities=12% Similarity=-0.040 Sum_probs=39.0
Q ss_pred CcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEc
Q 016774 161 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV 240 (383)
Q Consensus 161 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~ 240 (383)
++.+|+..-. ...+++||++++ ....... + .+ -.+++...++.+++..+ +.|++||+
T Consensus 24 ~~~l~~~d~~------~~~i~~~d~~~~----~~~~~~~---~-~~-~~~i~~~~dG~l~v~~~--------~~l~~~d~ 80 (297)
T 3g4e_A 24 SNSLLFVDIP------AKKVCRWDSFTK----QVQRVTM---D-AP-VSSVALRQSGGYVATIG--------TKFCALNW 80 (297)
T ss_dssp TTEEEEEETT------TTEEEEEETTTC----CEEEEEC---S-SC-EEEEEEBTTSSEEEEET--------TEEEEEET
T ss_pred CCEEEEEECC------CCEEEEEECCCC----cEEEEeC---C-Cc-eEEEEECCCCCEEEEEC--------CeEEEEEC
Confidence 4578877542 256899999886 4443331 1 11 12334444566665431 25999999
Q ss_pred ccCccceEEec
Q 016774 241 YEGFFKWVQIP 251 (383)
Q Consensus 241 ~~~~~~W~~i~ 251 (383)
++ .+++.+.
T Consensus 81 ~~--g~~~~~~ 89 (297)
T 3g4e_A 81 KE--QSAVVLA 89 (297)
T ss_dssp TT--TEEEEEE
T ss_pred CC--CcEEEEE
Confidence 88 7777663
No 131
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=40.76 E-value=2.6e+02 Score=26.99 Aligned_cols=134 Identities=12% Similarity=0.063 Sum_probs=69.5
Q ss_pred eeEEEECCEEEEEcCccCCCCCccceeeeec-ccccCCcccccEEEccCCCCCCC--cc---ccceeEEE-CCcE----E
Q 016774 96 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQI-ACHENLGITLSWRLLDVGSIAPP--AR---GAHAACCI-DNRK----M 164 (383)
Q Consensus 96 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~-~~~~~~~~~~~W~~~~~~~~~p~--~r---~~~~~~~~-~~~~----i 164 (383)
.+-++.+++||+.+.. .+.++.+|. .. -+..|+.-........ .+ .....++. .+++ |
T Consensus 56 ~tP~v~~g~vyv~~~~------~~~v~AlD~~~t-----G~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV 124 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF------PNNTFALGLDDP-----GTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALI 124 (599)
T ss_dssp SCCEEETTEEEEECST------TTCEEEEETTCT-----TSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEE
T ss_pred eccEEECCEEEEEeCC------CCEEEEEeCCCC-----CcEEEEECCCCCccccccccccccccceEEEecCCcceeEE
Confidence 4556679999998752 125888887 31 3667887433210000 01 11122331 3435 7
Q ss_pred EEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCc
Q 016774 165 VIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGF 244 (383)
Q Consensus 165 ~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~ 244 (383)
|+... -..++.+|.+++ +..|+.-............+-++. ++.+|+-.+.. .......|+.||.+++.
T Consensus 125 ~v~t~-------dg~l~AlDa~TG--~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~-e~g~~g~v~A~D~~TG~ 193 (599)
T 1w6s_A 125 LKTQL-------DGNVAALNAETG--ETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGA-ELGVRGYLTAYDVKTGE 193 (599)
T ss_dssp EEECT-------TSEEEEEETTTC--CEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCG-GGTCCCEEEEEETTTCC
T ss_pred EEEcC-------CCEEEEEECCCC--CEEEeecCCCCCccceeecCCEEE-CCEEEEEeccc-ccCCCCeEEEEECCCCc
Confidence 76432 245899998876 456875431100000111222344 57666533221 11123469999999866
Q ss_pred cceEEec
Q 016774 245 FKWVQIP 251 (383)
Q Consensus 245 ~~W~~i~ 251 (383)
..|+.-.
T Consensus 194 ~~W~~~~ 200 (599)
T 1w6s_A 194 QVWRAYA 200 (599)
T ss_dssp EEEEEES
T ss_pred EEEEEcC
Confidence 7798753
No 132
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=39.51 E-value=2.9e+02 Score=27.20 Aligned_cols=106 Identities=12% Similarity=0.048 Sum_probs=56.2
Q ss_pred CCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEE
Q 016774 160 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 239 (383)
Q Consensus 160 ~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~ 239 (383)
.++.|++++|.. .-+++||++++ +++.......+......++....++.|++- ... .+.+|+
T Consensus 481 ~~g~lWi~~~t~------~Gl~~~d~~~~----~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~-------Gl~~~~ 542 (758)
T 3ott_A 481 NEGNVWVLLYNN------KGIDKINPRTR----EVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHG-------GVMRIN 542 (758)
T ss_dssp TTSCEEEEETTC------SSEEEEETTTT----EEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETT-------EEEEEC
T ss_pred CCCCEEEEccCC------CCcEEEeCCCC----ceEEecCCCcCCCcccceEEECCCCCEEEE-ecC-------ceEEEe
Confidence 446788866642 34899999987 777764211111112223333345667753 321 389999
Q ss_pred cccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 240 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 240 ~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
+.+ .+++.+. ...+|... -.++.. .++.|++-. .. .+.+||+.+
T Consensus 543 ~~~--~~~~~~~------~~gl~~~~-i~~i~~-~~g~lWi~t-~~-------Gl~~~~~~~ 586 (758)
T 3ott_A 543 PKD--ESQQSIS------FGSFSNNE-ILSMTC-VKNSIWVST-TN-------GLWIIDRKT 586 (758)
T ss_dssp C----CCCCBCC------CCC---CC-EEEEEE-ETTEEEEEE-SS-------CEEEEETTT
T ss_pred cCC--CceEEec------ccCCCccc-eEEEEE-CCCCEEEEC-CC-------CeEEEcCCC
Confidence 988 6665552 12344322 223333 567777754 22 378888874
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=38.74 E-value=2.8e+02 Score=26.88 Aligned_cols=116 Identities=14% Similarity=0.102 Sum_probs=59.4
Q ss_pred eeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCC-CC-C--------------CC-----CCceEEE
Q 016774 155 AACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHP-SP-P--------------AR-----SGHSLTR 213 (383)
Q Consensus 155 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~-~p-~--------------~r-----~~~~~~~ 213 (383)
......+++.+++++....+.....++.+|+.++ +..++.... .. . .| .......
T Consensus 41 ~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 41 KPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG----QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp EEEECTTSSEEEEEECCSSCTTEEEEEEEETTTC----CEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CceEecCCCEEEEEeccCCCCcccEEEEEECCCC----ceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 3444455566666554122223457999999887 666554110 10 0 00 0122233
Q ss_pred EcCCEEEEEcccCCCCCccccEEEEEcccCcc---ceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCC
Q 016774 214 IGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFF---KWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRR 290 (383)
Q Consensus 214 ~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~---~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~ 290 (383)
-.+++.++++.. ..|+++|+.+ . .-.++. ... ... .......+++.++++..
T Consensus 117 SpDg~~l~~~~~-------~~i~~~d~~~--~~~~~~~~l~--------~~~-~~~-~~~~~SPDG~~la~~~~------ 171 (741)
T 2ecf_A 117 SPDAQRLLFPLG-------GELYLYDLKQ--EGKAAVRQLT--------HGE-GFA-TDAKLSPKGGFVSFIRG------ 171 (741)
T ss_dssp CTTSSEEEEEET-------TEEEEEESSS--CSTTSCCBCC--------CSS-SCE-EEEEECTTSSEEEEEET------
T ss_pred CCCCCEEEEEeC-------CcEEEEECCC--CCcceEEEcc--------cCC-ccc-ccccCCCCCCEEEEEeC------
Confidence 335666666553 4799999987 5 433331 111 112 22222366766666532
Q ss_pred CCcEEEEEcC
Q 016774 291 KDDFWVLDTK 300 (383)
Q Consensus 291 ~~~~~~~d~~ 300 (383)
++++++|+.
T Consensus 172 -~~i~~~d~~ 180 (741)
T 2ecf_A 172 -RNLWVIDLA 180 (741)
T ss_dssp -TEEEEEETT
T ss_pred -CcEEEEecC
Confidence 269999987
No 134
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=37.70 E-value=3e+02 Score=26.92 Aligned_cols=130 Identities=11% Similarity=0.002 Sum_probs=68.1
Q ss_pred cceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCC-------CCcceeEEEECCEEEEEcCccCC
Q 016774 42 HSLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPS-------GRFGHTCVVIGDCLVLFGGINDR 114 (383)
Q Consensus 42 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~-------~r~~~~~~~~~~~iyv~GG~~~~ 114 (383)
.+-++.++.||+... ...++.+|..+ ....|+.-...... .....+.++.+++||+...
T Consensus 64 ~~P~v~~g~vyv~~~-------~~~v~AlD~~t---G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~---- 129 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGP-------FSVVYALDARD---GRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL---- 129 (689)
T ss_dssp CCCEEETTEEEEECG-------GGCEEEEETTT---CCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT----
T ss_pred ecCEEECCEEEEEcC-------CCeEEEEECCC---CceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc----
Confidence 344567889888764 24577787744 33478764321110 0112234667888887652
Q ss_pred CCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCce
Q 016774 115 GNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSW 194 (383)
Q Consensus 115 ~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W 194 (383)
...++.+|.. +-+..|+.-.............+.+..++ .+|+..+. .+......++.||..|+ +..|
T Consensus 130 ---dg~l~AlDa~-----TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~-~~~~~~g~v~a~D~~tG--~~~W 197 (689)
T 1yiq_A 130 ---DGRLEAIDAK-----TGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGG-AEFGVRGYVTAYDAETG--KEAW 197 (689)
T ss_dssp ---TSEEEEEETT-----TCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBC-TTTCCBCEEEEEETTTC--CEEE
T ss_pred ---CCEEEEEECC-----CCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCC-CccCCCCEEEEEECCCC--cEEE
Confidence 1258888872 12456886432010111111223333444 77663322 11123457999999887 3457
Q ss_pred EEc
Q 016774 195 QQL 197 (383)
Q Consensus 195 ~~~ 197 (383)
+.-
T Consensus 198 ~~~ 200 (689)
T 1yiq_A 198 RFY 200 (689)
T ss_dssp EEE
T ss_pred Eec
Confidence 754
No 135
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=36.63 E-value=2.2e+02 Score=24.93 Aligned_cols=107 Identities=9% Similarity=0.028 Sum_probs=52.8
Q ss_pred cEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCC-----CCCCceEEEEcCC-EEEEEcccCCCCCccccE
Q 016774 162 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPP-----ARSGHSLTRIGGN-RTVLFGGRGVGYEVLNDV 235 (383)
Q Consensus 162 ~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~-----~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~v 235 (383)
+.+++.|+.+ ..+.++|+.+. +-...- .... .....++....++ .+++.|+.+.. ...|
T Consensus 178 ~~~l~~~~~d------g~v~iwd~~~~----~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---~~~i 242 (416)
T 2pm9_A 178 AHVFASAGSS------NFASIWDLKAK----KEVIHL--SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN---DPSI 242 (416)
T ss_dssp TTEEEEESSS------SCEEEEETTTT----EEEEEE--CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS---SCCC
T ss_pred CcEEEEEcCC------CCEEEEECCCC----CcceEE--eccccccccCCceEEEEECCCCCCEEEEEECCCC---CceE
Confidence 4677777642 34889998876 332222 1111 1122223333322 46777765320 1247
Q ss_pred EEEEcccCccceEEecccccCCCCCCC--CCceeeEEEEEc-CCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 236 WFLDVYEGFFKWVQIPYELQNIPAGFS--LPRVGHSATLIL-GGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 236 ~~~~~~~~~~~W~~i~~~~~~~~~~~p--~~r~~~~~~~~~-~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
.+||+.+ ..- .+ ..+. ....-.++.... ++.+++.|+.++ .+.++|+.
T Consensus 243 ~~~d~~~--~~~-~~--------~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg------~v~~wd~~ 293 (416)
T 2pm9_A 243 LIWDLRN--ANT-PL--------QTLNQGHQKGILSLDWCHQDEHLLLSSGRDN------TVLLWNPE 293 (416)
T ss_dssp CEEETTS--TTS-CS--------BCCCSCCSSCEEEEEECSSCSSCEEEEESSS------EEEEECSS
T ss_pred EEEeCCC--CCC-Cc--------EEeecCccCceeEEEeCCCCCCeEEEEeCCC------CEEEeeCC
Confidence 8888876 321 11 1111 111112222223 677888888754 37788876
No 136
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=36.58 E-value=2.3e+02 Score=25.22 Aligned_cols=106 Identities=8% Similarity=0.126 Sum_probs=54.7
Q ss_pred CCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEE
Q 016774 160 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 239 (383)
Q Consensus 160 ~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~ 239 (383)
.++.+++.|+.+ ..+.++|+.+. .....-. . ......++....++.+++.|+.+. .|.++|
T Consensus 118 p~~~~l~s~s~D------g~i~vwd~~~~----~~~~~l~-~--h~~~V~~v~~~~~~~~l~sgs~D~------~i~iwd 178 (410)
T 1vyh_C 118 PVFSVMVSASED------ATIKVWDYETG----DFERTLK-G--HTDSVQDISFDHSGKLLASCSADM------TIKLWD 178 (410)
T ss_dssp SSSSEEEEEESS------SCEEEEETTTC----CCCEEEC-C--CSSCEEEEEECTTSSEEEEEETTS------CCCEEE
T ss_pred CCCCEEEEEeCC------CeEEEEECCCC----cEEEEEe-c--cCCcEEEEEEcCCCCEEEEEeCCC------eEEEEe
Confidence 444677777742 34788888876 3222211 1 111122333334567888888742 377788
Q ss_pred cccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 240 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 240 ~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
+.+ ..-...- ..... .-.++....++..++.|+.++ .+.++|+.+
T Consensus 179 ~~~--~~~~~~~-------~~h~~--~V~~v~~~p~~~~l~s~s~D~------~i~~wd~~~ 223 (410)
T 1vyh_C 179 FQG--FECIRTM-------HGHDH--NVSSVSIMPNGDHIVSASRDK------TIKMWEVQT 223 (410)
T ss_dssp TTS--SCEEECC-------CCCSS--CEEEEEECSSSSEEEEEETTS------EEEEEETTT
T ss_pred CCC--CceeEEE-------cCCCC--CEEEEEEeCCCCEEEEEeCCC------eEEEEECCC
Confidence 876 4332220 11111 112222224667778887754 477888763
No 137
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=36.42 E-value=2.3e+02 Score=25.19 Aligned_cols=23 Identities=4% Similarity=-0.042 Sum_probs=13.4
Q ss_pred cCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 274 LGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 274 ~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.++.+++.+|... ..+.++|+.+
T Consensus 331 ~~~~lv~~sg~~d-----~~I~iwd~~~ 353 (420)
T 4gga_A 331 HYKELISGHGFAQ-----NQLVIWKYPT 353 (420)
T ss_dssp TTTEEEEEECTTT-----CCEEEEETTT
T ss_pred CCCeEEEEEecCC-----CEEEEEECCC
Confidence 3455655555432 2488888763
No 138
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=36.10 E-value=2.2e+02 Score=24.76 Aligned_cols=148 Identities=11% Similarity=0.035 Sum_probs=75.3
Q ss_pred EEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEEC-CcEEEEEcccCCCCCcccceEE
Q 016774 104 CLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCID-NRKMVIHAGIGLYGLRLGDTWV 182 (383)
Q Consensus 104 ~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~ 182 (383)
++++.|+.+. .+.++|+ .+.+....... ......-.+++... ++.+++.|+.+ ..+..
T Consensus 87 ~~l~s~~~dg------~i~iwd~-------~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~i 145 (383)
T 3ei3_B 87 TTVAVGSKGG------DIILWDY-------DVQNKTSFIQG--MGPGDAITGMKFNQFNTNQLFVSSIR------GATTL 145 (383)
T ss_dssp TEEEEEEBTS------CEEEEET-------TSTTCEEEECC--CSTTCBEEEEEEETTEEEEEEEEETT------TEEEE
T ss_pred CEEEEEcCCC------eEEEEeC-------CCcccceeeec--CCcCCceeEEEeCCCCCCEEEEEeCC------CEEEE
Confidence 4777776532 4778888 34444433221 00111122333334 44666766642 34788
Q ss_pred EeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCC
Q 016774 183 LELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFS 262 (383)
Q Consensus 183 ~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p 262 (383)
+|+.++ ....... .........++....++.+++.|+.+ ..|.++|+.. ..-..+. . .
T Consensus 146 wd~~~~----~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~--~~~~~~~--------~-h 203 (383)
T 3ei3_B 146 RDFSGS----VIQVFAK-TDSWDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDG--HEIFKEK--------L-H 203 (383)
T ss_dssp EETTSC----EEEEEEC-CCCSSCCEEEEEEETTTTEEEEEETT------SEEEEEETTS--CEEEEEE--------C-S
T ss_pred EECCCC----ceEEEec-cCCCCCCeEEEEECCCCCEEEEECCC------CCEEEEECCC--CEEEEec--------c-C
Confidence 888876 5554441 11111222334444456777777764 2588999865 4444442 1 1
Q ss_pred CCceeeEEEEEcCCE-EEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 263 LPRVGHSATLILGGR-VLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 263 ~~r~~~~~~~~~~~~-l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.... .++....++. +++.|+.++ .+.++|+.+
T Consensus 204 ~~~v-~~~~~~~~~~~~l~s~~~d~------~i~iwd~~~ 236 (383)
T 3ei3_B 204 KAKV-THAEFNPRCDWLMATSSVDA------TVKLWDLRN 236 (383)
T ss_dssp SSCE-EEEEECSSCTTEEEEEETTS------EEEEEEGGG
T ss_pred CCcE-EEEEECCCCCCEEEEEeCCC------EEEEEeCCC
Confidence 1111 2222224455 788887754 478888863
No 139
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=35.76 E-value=2.1e+02 Score=24.55 Aligned_cols=111 Identities=12% Similarity=0.103 Sum_probs=57.6
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccE
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDV 235 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v 235 (383)
++...++.+++.|+.+ ..+..+|+.+. .-...-. .. .....+++...++.+++.|+.+. .|
T Consensus 190 ~~~~~~~~~l~sg~~d------~~v~~wd~~~~----~~~~~~~-~h--~~~v~~v~~~p~~~~l~s~s~d~------~v 250 (340)
T 1got_B 190 LSLAPDTRLFVSGACD------ASAKLWDVREG----MCRQTFT-GH--ESDINAICFFPNGNAFATGSDDA------TC 250 (340)
T ss_dssp EEECTTSSEEEEEETT------SCEEEEETTTC----SEEEEEC-CC--SSCEEEEEECTTSSEEEEEETTS------CE
T ss_pred EEECCCCCEEEEEeCC------CcEEEEECCCC----eeEEEEc-CC--cCCEEEEEEcCCCCEEEEEcCCC------cE
Confidence 3334455777887753 34788888775 3322211 11 11122333344567778887642 48
Q ss_pred EEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 236 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 236 ~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
.++|+.. .+-.... .......+ -.++....++.+++.|+.++ .+.++|+.
T Consensus 251 ~iwd~~~--~~~~~~~-----~~~~~~~~--v~~~~~s~~g~~l~~g~~d~------~i~vwd~~ 300 (340)
T 1got_B 251 RLFDLRA--DQELMTY-----SHDNIICG--ITSVSFSKSGRLLLAGYDDF------NCNVWDAL 300 (340)
T ss_dssp EEEETTT--TEEEEEE-----CCTTCCSC--EEEEEECTTSSEEEEEETTS------EEEEEETT
T ss_pred EEEECCC--CcEEEEE-----ccCCcccc--eEEEEECCCCCEEEEECCCC------eEEEEEcc
Confidence 8899876 3322110 00111111 11222225778888887754 47888876
No 140
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=35.52 E-value=4.1e+02 Score=27.78 Aligned_cols=107 Identities=8% Similarity=-0.045 Sum_probs=54.6
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccE
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDV 235 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v 235 (383)
++...++..++.|+.+ ..+..+|+.++ ...... . ......++.... +..++.|+.+ ..+
T Consensus 1009 l~~s~dg~~l~s~~~d------g~i~vwd~~~~----~~~~~~--~--~~~~v~~~~~~~-~~~l~~~~~d------g~v 1067 (1249)
T 3sfz_A 1009 IQFTADGKTLISSSED------SVIQVWNWQTG----DYVFLQ--A--HQETVKDFRLLQ-DSRLLSWSFD------GTV 1067 (1249)
T ss_dssp EEECSSSSCEEEECSS------SBEEEEETTTT----EEECCB--C--CSSCEEEEEECS-SSEEEEEESS------SEE
T ss_pred EEECCCCCEEEEEcCC------CEEEEEECCCC----ceEEEe--c--CCCcEEEEEEcC-CCcEEEEECC------CcE
Confidence 3344455677777642 35888898887 544332 1 111222333333 4445566653 258
Q ss_pred EEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 236 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 236 ~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
.++|+.+ .+-...- .. ....... +....++.+++.|+.++ .+.++|+.
T Consensus 1068 ~vwd~~~--~~~~~~~-------~~-~~~~v~~-~~~s~d~~~l~s~s~d~------~v~iwd~~ 1115 (1249)
T 3sfz_A 1068 KVWNVIT--GRIERDF-------TC-HQGTVLS-CAISSDATKFSSTSADK------TAKIWSFD 1115 (1249)
T ss_dssp EEEETTT--TCCCEEE-------EC-CSSCCCC-EEECSSSSSCEEECCSS------CCCEECSS
T ss_pred EEEECCC--CceeEEE-------cc-cCCcEEE-EEECCCCCEEEEEcCCC------cEEEEECC
Confidence 8899877 4322210 00 1111112 22226777778887765 25567765
No 141
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=34.89 E-value=1.9e+02 Score=23.78 Aligned_cols=151 Identities=7% Similarity=-0.118 Sum_probs=73.7
Q ss_pred eeEEEE-CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCC
Q 016774 96 HTCVVI-GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYG 174 (383)
Q Consensus 96 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~ 174 (383)
++++.. ++.+|+..... ..++++|. ..+...+.... ....-+.++...++.+|+....
T Consensus 60 ~~i~~~~~g~l~v~~~~~------~~i~~~~~--------~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~---- 118 (299)
T 2z2n_A 60 MCLTISSDGEVWFTENAA------NKIGRITK--------KGIIKEYTLPN---PDSAPYGITEGPNGDIWFTEMN---- 118 (299)
T ss_dssp EEEEECTTSCEEEEETTT------TEEEEECT--------TSCEEEEECSS---TTCCEEEEEECTTSCEEEEETT----
T ss_pred eeEEECCCCCEEEeCCCC------CeEEEECC--------CCcEEEEeCCC---cCCCceeeEECCCCCEEEEecC----
Confidence 344443 34577764321 24788887 23444433211 1112233444445688886532
Q ss_pred CcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccc
Q 016774 175 LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYEL 254 (383)
Q Consensus 175 ~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~ 254 (383)
...++++|+ ++ +...... +. .....+.++...++.+|+.... ...++++|+ + .+...+.
T Consensus 119 --~~~i~~~d~-~g----~~~~~~~-~~-~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~-~--g~~~~~~--- 177 (299)
T 2z2n_A 119 --GNRIGRITD-DG----KIREYEL-PN-KGSYPSFITLGSDNALWFTENQ------NNAIGRITE-S--GDITEFK--- 177 (299)
T ss_dssp --TTEEEEECT-TC----CEEEEEC-SS-TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-T--CCEEEEE---
T ss_pred --CceEEEECC-CC----CEEEecC-CC-CCCCCceEEEcCCCCEEEEeCC------CCEEEEEcC-C--CcEEEee---
Confidence 245889998 44 4444431 11 1122233444445677775422 135899998 6 6666542
Q ss_pred cCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEc
Q 016774 255 QNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDT 299 (383)
Q Consensus 255 ~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~ 299 (383)
..... .. -.+.+...++.||+.... .+.+.++|+
T Consensus 178 --~~~~~--~~-~~~i~~~~~g~l~v~~~~------~~~i~~~~~ 211 (299)
T 2z2n_A 178 --IPTPA--SG-PVGITKGNDDALWFVEII------GNKIGRITT 211 (299)
T ss_dssp --CSSTT--CC-EEEEEECTTSSEEEEETT------TTEEEEECT
T ss_pred --CCCCC--Cc-ceeEEECCCCCEEEEccC------CceEEEECC
Confidence 00111 11 123333245778776532 234777776
No 142
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=34.87 E-value=2.4e+02 Score=24.83 Aligned_cols=109 Identities=9% Similarity=-0.005 Sum_probs=53.4
Q ss_pred EEEEEcCccCCCCCccceeeeecccccCCcccccEEEccC-CCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEE
Q 016774 104 CLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDV-GSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWV 182 (383)
Q Consensus 104 ~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~-~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 182 (383)
++++.|+.+. .+.++|+. +.+...... .. ....-.+++...++..++.|+.+ ..+.+
T Consensus 145 ~~l~s~~~dg------~i~iwd~~-------~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d------~~i~i 202 (402)
T 2aq5_A 145 NVLLSAGCDN------VILVWDVG-------TGAAVLTLGPDV---HPDTIYSVDWSRDGALICTSCRD------KRVRV 202 (402)
T ss_dssp TEEEEEETTS------CEEEEETT-------TTEEEEEECTTT---CCSCEEEEEECTTSSCEEEEETT------SEEEE
T ss_pred CEEEEEcCCC------EEEEEECC-------CCCccEEEecCC---CCCceEEEEECCCCCEEEEEecC------CcEEE
Confidence 3666776432 47888883 443332210 11 11112233334455667777642 45889
Q ss_pred EeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEccc
Q 016774 183 LELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE 242 (383)
Q Consensus 183 ~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~ 242 (383)
+|+++. +-...-..... .....++....++.+++.|.... .-..|.+||+.+
T Consensus 203 wd~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~~~---~d~~i~iwd~~~ 254 (402)
T 2aq5_A 203 IEPRKG----TVVAEKDRPHE-GTRPVHAVFVSEGKILTTGFSRM---SERQVALWDTKH 254 (402)
T ss_dssp EETTTT----EEEEEEECSSC-SSSCCEEEECSTTEEEEEEECTT---CCEEEEEEETTB
T ss_pred EeCCCC----ceeeeeccCCC-CCcceEEEEcCCCcEEEEeccCC---CCceEEEEcCcc
Confidence 998876 32221101111 11123344445677777773110 113588999876
No 143
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=34.24 E-value=2e+02 Score=23.72 Aligned_cols=151 Identities=11% Similarity=-0.062 Sum_probs=73.6
Q ss_pred eeEEEEC-CEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCC
Q 016774 96 HTCVVIG-DCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYG 174 (383)
Q Consensus 96 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~ 174 (383)
++++... +++|+.... .+.+++||. ..++....... ....-+.++...++.+|+....
T Consensus 65 ~~i~~~~~g~l~v~~~~------~~~v~~~d~--------~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~---- 123 (300)
T 2qc5_A 65 MCLIVSSLGDIWFTENG------ANKIGKLSK--------KGGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLN---- 123 (300)
T ss_dssp EEEEECTTSCEEEEETT------TTEEEEECT--------TSCEEEEECSS---TTCCEEEEEECSTTCEEEEETT----
T ss_pred eeEEECCCCCEEEEecC------CCeEEEECC--------CCCeEEecCCC---CCCCCccceECCCCCEEEEccC----
Confidence 3444433 458776432 124888887 24454433211 1122233444445678886432
Q ss_pred CcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccc
Q 016774 175 LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYEL 254 (383)
Q Consensus 175 ~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~ 254 (383)
...++++|++ + +...... +. ....-+.++...++.+|+..... ..|++|+. . .+...+.
T Consensus 124 --~~~i~~~~~~-g----~~~~~~~-~~-~~~~~~~i~~d~~g~l~v~~~~~------~~i~~~~~-~--g~~~~~~--- 182 (300)
T 2qc5_A 124 --GDRIGKLTAD-G----TIYEYDL-PN-KGSYPAFITLGSDNALWFTENQN------NSIGRITN-T--GKLEEYP--- 182 (300)
T ss_dssp --TTEEEEECTT-S----CEEEEEC-SS-TTCCEEEEEECTTSSEEEEETTT------TEEEEECT-T--CCEEEEE---
T ss_pred --CCeEEEECCC-C----CEEEccC-CC-CCCCceeEEECCCCCEEEEecCC------CeEEEECC-C--CcEEEee---
Confidence 2358899987 4 4444331 10 11222334443456677754321 25899998 5 5565552
Q ss_pred cCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEc
Q 016774 255 QNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDT 299 (383)
Q Consensus 255 ~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~ 299 (383)
..... . .-.+.+...++.||+.... ...++++|.
T Consensus 183 --~~~~~--~-~~~~i~~d~~g~l~v~~~~------~~~i~~~~~ 216 (300)
T 2qc5_A 183 --LPTNA--A-APVGITSGNDGALWFVEIM------GNKIGRITT 216 (300)
T ss_dssp --CSSTT--C-CEEEEEECTTSSEEEEETT------TTEEEEECT
T ss_pred --CCCCC--C-CcceEEECCCCCEEEEccC------CCEEEEEcC
Confidence 11111 1 1122333246778876532 224777776
No 144
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=33.99 E-value=2.6e+02 Score=25.06 Aligned_cols=106 Identities=11% Similarity=0.149 Sum_probs=55.3
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccE
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDV 235 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v 235 (383)
++...++..++.|+.+ ..+..+|+.+. +-...-. . ....-..+... +..++.|+.+. .|
T Consensus 316 ~~~~~~~~~l~sg~~d------g~i~vwd~~~~----~~~~~~~-~---h~~~v~~~~~~-~~~l~s~s~dg------~v 374 (464)
T 3v7d_B 316 TIYDHERKRCISASMD------TTIRIWDLENG----ELMYTLQ-G---HTALVGLLRLS-DKFLVSAAADG------SI 374 (464)
T ss_dssp EEEETTTTEEEEEETT------SCEEEEETTTT----EEEEEEC-C---CSSCEEEEEEC-SSEEEEEETTS------EE
T ss_pred EEEcCCCCEEEEEeCC------CcEEEEECCCC----cEEEEEe-C---CCCcEEEEEEc-CCEEEEEeCCC------cE
Confidence 3344455666777642 34889998876 3222111 1 11122344553 56677777642 48
Q ss_pred EEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 236 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 236 ~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.++|+.+ ..-.... . ...... .+....++.+++.|+ ++ .+.++|+++
T Consensus 375 ~vwd~~~--~~~~~~~--------~-~~~~~~-~~~~~~~~~~l~~~~-dg------~i~iwd~~~ 421 (464)
T 3v7d_B 375 RGWDAND--YSRKFSY--------H-HTNLSA-ITTFYVSDNILVSGS-EN------QFNIYNLRS 421 (464)
T ss_dssp EEEETTT--CCEEEEE--------E-CTTCCC-EEEEEECSSEEEEEE-TT------EEEEEETTT
T ss_pred EEEECCC--Cceeeee--------c-CCCCcc-EEEEEeCCCEEEEec-CC------eEEEEECCC
Confidence 8999887 3322110 0 111111 222236777777776 32 488999873
No 145
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=33.89 E-value=2.3e+02 Score=24.50 Aligned_cols=81 Identities=9% Similarity=0.033 Sum_probs=38.3
Q ss_pred CcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEc
Q 016774 161 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV 240 (383)
Q Consensus 161 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~ 240 (383)
+++.+++............+|.+|+++. ...++. .............-.+++.+++.... .......++++|+
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~----~~~~l~--~~~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGT----NMRKVK--THAEGESCTHEFWVPDGSALVYVSYL-KGSPDRFIYSADP 271 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSC----CCEESC--CCCTTEEEEEEEECTTSSCEEEEEEE-TTCCCEEEEEECT
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCC----ceEEee--eCCCCcccccceECCCCCEEEEEecC-CCCCcceEEEEec
Confidence 4454444332222223568999998876 555554 21111111112222344433332221 1111124999999
Q ss_pred ccCccceEEe
Q 016774 241 YEGFFKWVQI 250 (383)
Q Consensus 241 ~~~~~~W~~i 250 (383)
.+ .+-+.+
T Consensus 272 ~~--g~~~~l 279 (388)
T 3pe7_A 272 ET--LENRQL 279 (388)
T ss_dssp TT--CCEEEE
T ss_pred CC--CceEEE
Confidence 88 665555
No 146
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=33.36 E-value=2.1e+02 Score=23.90 Aligned_cols=111 Identities=9% Similarity=0.092 Sum_probs=56.0
Q ss_pred ECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEE
Q 016774 159 IDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFL 238 (383)
Q Consensus 159 ~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~ 238 (383)
..++.+++.|+.+ ..+..+|+.+. +....-. . ........+....++..++.|+.+ ..|.+|
T Consensus 158 ~~~~~~l~~~~~d------~~i~~wd~~~~----~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~~~~d------~~i~iw 219 (312)
T 4ery_A 158 NRDGSLIVSSSYD------GLCRIWDTASG----QCLKTLI-D-DDNPPVSFVKFSPNGKYILAATLD------NTLKLW 219 (312)
T ss_dssp CTTSSEEEEEETT------SCEEEEETTTC----CEEEEEC-C-SSCCCEEEEEECTTSSEEEEEETT------TEEEEE
T ss_pred cCCCCEEEEEeCC------CcEEEEECCCC----ceeeEEe-c-cCCCceEEEEECCCCCEEEEEcCC------CeEEEE
Confidence 3455677777642 34888998876 3322211 1 111111222333346667777653 258899
Q ss_pred EcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 239 DVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 239 ~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
|+.+ .+-...- .+.......-.......++.+++.|+.++ .+.++|+.+
T Consensus 220 d~~~--~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~sg~~dg------~i~vwd~~~ 268 (312)
T 4ery_A 220 DYSK--GKCLKTY------TGHKNEKYCIFANFSVTGGKWIVSGSEDN------LVYIWNLQT 268 (312)
T ss_dssp ETTT--TEEEEEE------CSSCCSSSCCCEEEECSSSCEEEECCTTS------CEEEEETTT
T ss_pred ECCC--CcEEEEE------EecCCceEEEEEEEEeCCCcEEEEECCCC------EEEEEECCC
Confidence 9877 4332221 01111111111222225677888888765 478888873
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=33.30 E-value=2.2e+02 Score=23.95 Aligned_cols=28 Identities=14% Similarity=0.143 Sum_probs=15.6
Q ss_pred ceeEEECCc-EEEEEcccCCCCCcccceEEEeccC
Q 016774 154 HAACCIDNR-KMVIHAGIGLYGLRLGDTWVLELSE 187 (383)
Q Consensus 154 ~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~d~~~ 187 (383)
+.++...++ .+|+.+.. -..+.+||+.+
T Consensus 132 ~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~ 160 (343)
T 1ri6_A 132 HSANISPDNRTLWVPALK------QDRICLFTVSD 160 (343)
T ss_dssp CCCEECTTSSEEEEEEGG------GTEEEEEEECT
T ss_pred eEEEECCCCCEEEEecCC------CCEEEEEEecC
Confidence 344444443 56665422 23588888876
No 148
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=33.04 E-value=2.4e+02 Score=24.42 Aligned_cols=104 Identities=17% Similarity=0.151 Sum_probs=55.3
Q ss_pred cEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcc
Q 016774 162 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY 241 (383)
Q Consensus 162 ~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~ 241 (383)
+..++.|+.+ ..+..+|+.+. +....-. .. .....++....++.+++.|+.+. .|.++|+.
T Consensus 210 g~~l~sgs~D------g~v~~wd~~~~----~~~~~~~-~h--~~~v~~v~~~p~~~~l~s~s~D~------~v~lwd~~ 270 (354)
T 2pbi_B 210 GNTFVSGGCD------KKAMVWDMRSG----QCVQAFE-TH--ESDVNSVRYYPSGDAFASGSDDA------TCRLYDLR 270 (354)
T ss_dssp CCEEEEEETT------SCEEEEETTTC----CEEEEEC-CC--SSCEEEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred CCEEEEEeCC------CeEEEEECCCC----cEEEEec-CC--CCCeEEEEEeCCCCEEEEEeCCC------eEEEEECC
Confidence 4677777753 34888898876 4433221 11 11112233333566777877642 48889987
Q ss_pred cCccceEEecccccCCCCCCCCCceeeEEEEE-cCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 242 EGFFKWVQIPYELQNIPAGFSLPRVGHSATLI-LGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 242 ~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~-~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
. ..-..+. . ..........+.+ .++.+++.|+.++ .+.++|+.
T Consensus 271 ~--~~~~~~~-------~-~~~~~~~~~~~~~s~~g~~l~~g~~d~------~i~vwd~~ 314 (354)
T 2pbi_B 271 A--DREVAIY-------S-KESIIFGASSVDFSLSGRLLFAGYNDY------TINVWDVL 314 (354)
T ss_dssp T--TEEEEEE-------C-CTTCCSCEEEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred C--CcEEEEE-------c-CCCcccceeEEEEeCCCCEEEEEECCC------cEEEEECC
Confidence 6 4322221 1 1111112222222 5677888887654 47888876
No 149
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=32.73 E-value=2.4e+02 Score=24.36 Aligned_cols=113 Identities=10% Similarity=0.086 Sum_probs=53.9
Q ss_pred CcEEEEEcccCCCCCcccceEEEeccCCcccCceEEccc----CCCC--CCCCCceEEEEc-CCEEEEEcccCCCCCccc
Q 016774 161 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVT----HPSP--PARSGHSLTRIG-GNRTVLFGGRGVGYEVLN 233 (383)
Q Consensus 161 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~----~~~p--~~r~~~~~~~~~-~~~i~v~GG~~~~~~~~~ 233 (383)
++.+++.|+.+ ..+.++|+.+............ ...+ ......++.... ++.+++.|+.+ .
T Consensus 55 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------~ 122 (408)
T 4a11_B 55 EGRYMLSGGSD------GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD------K 122 (408)
T ss_dssp TCCEEEEEETT------SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT------S
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC------C
Confidence 55777777752 3478888876521111211110 0000 111112222222 34567777653 2
Q ss_pred cEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEE-cCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 234 DVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLI-LGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 234 ~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~-~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.|.++|+.+ ..-.... ..+........... .++.+++.|+.++ .+.++|+.+
T Consensus 123 ~i~iwd~~~--~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~d~~~ 175 (408)
T 4a11_B 123 TLKVWDTNT--LQTADVF--------NFEETVYSHHMSPVSTKHCLVAVGTRGP------KVQLCDLKS 175 (408)
T ss_dssp EEEEEETTT--TEEEEEE--------ECSSCEEEEEECSSCSSCCEEEEEESSS------SEEEEESSS
T ss_pred eEEEeeCCC--Cccceec--------cCCCceeeeEeecCCCCCcEEEEEcCCC------eEEEEeCCC
Confidence 588899887 4443331 12222222211110 1344777777654 488888873
No 150
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=31.90 E-value=2.7e+02 Score=24.54 Aligned_cols=109 Identities=11% Similarity=0.108 Sum_probs=58.0
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccE
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDV 235 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v 235 (383)
++...+++.++.|+.+ ..+.++|+.+. +-...-. . ......++....++..++.|+.+ ..|
T Consensus 129 v~~s~dg~~l~s~~~d------~~i~iwd~~~~----~~~~~~~-~--h~~~v~~~~~~p~~~~l~s~s~d------~~v 189 (393)
T 1erj_A 129 VCFSPDGKFLATGAED------RLIRIWDIENR----KIVMILQ-G--HEQDIYSLDYFPSGDKLVSGSGD------RTV 189 (393)
T ss_dssp EEECTTSSEEEEEETT------SCEEEEETTTT----EEEEEEC-C--CSSCEEEEEECTTSSEEEEEETT------SEE
T ss_pred EEECCCCCEEEEEcCC------CeEEEEECCCC----cEEEEEc-c--CCCCEEEEEEcCCCCEEEEecCC------CcE
Confidence 3334455777777642 35888898876 3322211 1 11122233333456667777764 258
Q ss_pred EEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEc-CCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 236 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLIL-GGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 236 ~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~-~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
.++|+.+ .+..... ..... -.++.... ++.+++.|+.++ .+.++|+.+
T Consensus 190 ~iwd~~~--~~~~~~~--------~~~~~--v~~~~~~~~~~~~l~~~s~d~------~v~iwd~~~ 238 (393)
T 1erj_A 190 RIWDLRT--GQCSLTL--------SIEDG--VTTVAVSPGDGKYIAAGSLDR------AVRVWDSET 238 (393)
T ss_dssp EEEETTT--TEEEEEE--------ECSSC--EEEEEECSTTCCEEEEEETTS------CEEEEETTT
T ss_pred EEEECCC--CeeEEEE--------EcCCC--cEEEEEECCCCCEEEEEcCCC------cEEEEECCC
Confidence 8889887 5443321 01111 11222223 678888888765 377888763
No 151
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=30.10 E-value=2.9e+02 Score=24.42 Aligned_cols=157 Identities=18% Similarity=0.173 Sum_probs=78.1
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCce-EEEEcCC-EEEEEcccCCCCCccc
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHS-LTRIGGN-RTVLFGGRGVGYEVLN 233 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~-~~~~~~~-~i~v~GG~~~~~~~~~ 233 (383)
++.-.++.+||.+-.. +..+++++++.. .-..|-.-. +....+.+.+ ++...++ .|++..+ . .
T Consensus 142 vavD~~GnaYVt~s~~-----~~~I~rV~pdG~-~~~~~~~~~--~~~~~~~G~nGIv~~pdg~~Liv~~~-~------g 206 (334)
T 2p9w_A 142 SAQDRDGNSYVAFALG-----MPAIARVSADGK-TVSTFAWES--GNGGQRPGYSGITFDPHSNKLIAFGG-P------R 206 (334)
T ss_dssp EEECTTSCEEEEEEES-----SCEEEEECTTSC-CEEEEEECC--CCSSSCCSCSEEEEETTTTEEEEESS-S------S
T ss_pred eEECCCCCEEEeCCCC-----CCeEEEEeCCCC-EEeeeeecC--CCcccccCcceEEEeCCCCEEEEEcC-C------C
Confidence 4444567899976542 155999999864 011243222 2233354444 4444334 5666655 2 2
Q ss_pred cEEEEEcccCccceEEecccccCCCCCC-CCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCCCcccccccccc
Q 016774 234 DVWFLDVYEGFFKWVQIPYELQNIPAGF-SLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSML 312 (383)
Q Consensus 234 ~v~~~~~~~~~~~W~~i~~~~~~~~~~~-p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 312 (383)
.++.||+.+ .....++.+ ..+.. ...-...-..+-.+++++++.-.. +..+.+.-.
T Consensus 207 ~L~~fD~~~--pv~~~v~~~---~~G~~~~~~~~dgilp~~~~G~vllV~~~~------~~~~~l~S~------------ 263 (334)
T 2p9w_A 207 ALTAFDVSK--PYAWPEPVK---INGDFGTLSGTEKIVTVPVGNESVLVGARA------PYAISFRSW------------ 263 (334)
T ss_dssp SEEEEECSS--SSCCCEECE---ESSCCCCCTTEEEEEEEEETTEEEEEEEET------TEEEEEECS------------
T ss_pred eEEEEcCCC--Ccceeeccc---ccCCcccccCcccccccccCCEEEEEEcCC------CCEEEEECC------------
Confidence 589999875 332133200 00111 111111111222677775554321 224444433
Q ss_pred cccccccccceeeccCCCCCCC--ccceeeeec---CCCcEEEEEcCccC
Q 016774 313 DSRGLLLNMWKRLRAEGYKPNC--RSFHRACPD---YSGRYLYVFGGMVD 357 (383)
Q Consensus 313 ~~~~~~~~~W~~~~~~~~~p~~--r~~~~~~~~---~~~~~l~v~GG~~~ 357 (383)
++ |+.....+..|.+ -.+.++++. ..+++||++.+.-.
T Consensus 264 ------Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f~ 306 (334)
T 2p9w_A 264 ------DN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAFFD 306 (334)
T ss_dssp ------ST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECCGG
T ss_pred ------CC-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeeecC
Confidence 34 8877665555542 123444444 46899999997744
No 152
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=29.80 E-value=2.6e+02 Score=23.71 Aligned_cols=123 Identities=8% Similarity=0.027 Sum_probs=56.4
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCC------CCCCCCCceEEEEcCCEEEEEcccCCCC
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHP------SPPARSGHSLTRIGGNRTVLFGGRGVGY 229 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~------~p~~r~~~~~~~~~~~~i~v~GG~~~~~ 229 (383)
+....++..++.++.+ .......+..+|+.+......+....... ........++....++..++.|+.+
T Consensus 121 ~~~~~~~~~l~~~~~~-~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--- 196 (369)
T 3zwl_B 121 VEFSPCGNYFLAILDN-VMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD--- 196 (369)
T ss_dssp EEECTTSSEEEEEECC-BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT---
T ss_pred EEEccCCCEEEEecCC-ccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC---
Confidence 3344455566665542 11123457777776552222222221000 0000022223333345567777653
Q ss_pred CccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 230 EVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 230 ~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
..|.+||+.+....-..+. . ..... .++....++.+++.|+.++ .+.++|+.+
T Consensus 197 ---g~i~i~d~~~~~~~~~~~~--------~-~~~~v-~~~~~~~~~~~l~~~~~d~------~i~v~d~~~ 249 (369)
T 3zwl_B 197 ---GKISKYDVSNNYEYVDSID--------L-HEKSI-SDMQFSPDLTYFITSSRDT------NSFLVDVST 249 (369)
T ss_dssp ---SEEEEEETTTTTEEEEEEE--------C-CSSCE-EEEEECTTSSEEEEEETTS------EEEEEETTT
T ss_pred ---CEEEEEECCCCcEeEEEEe--------c-CCCce-eEEEECCCCCEEEEecCCc------eEEEEECCC
Confidence 2588999875112222221 1 11111 2223225677777776644 478888873
No 153
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=29.54 E-value=3.7e+02 Score=25.55 Aligned_cols=129 Identities=13% Similarity=0.049 Sum_probs=60.6
Q ss_pred CccccceeEEECCcE-EEEEcccCCCCCcccceEEEeccCCcccCceEE-ccc-CCCCCCCCCceEEEEcC-CEEEEEcc
Q 016774 149 PARGAHAACCIDNRK-MVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQ-LVT-HPSPPARSGHSLTRIGG-NRTVLFGG 224 (383)
Q Consensus 149 ~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~-~~~-~~~p~~r~~~~~~~~~~-~~i~v~GG 224 (383)
..+.-|......+++ +|+.-. ..+.+..+|+.++ +=.. ++. +..|.+..+... ...+ +.+|+.+-
T Consensus 340 ~~~~~~d~~~~pdgr~~~va~~------~sn~V~ViD~~t~----kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~ 408 (567)
T 1qks_A 340 AERFLHDGGLDGSHRYFITAAN------ARNKLVVIDTKEG----KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSH 408 (567)
T ss_dssp CCSSEEEEEECTTSCEEEEEEG------GGTEEEEEETTTT----EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEB
T ss_pred ccccccCceECCCCCEEEEEeC------CCCeEEEEECCCC----cEEEEEeccCcCCCCccceee-ECCCCCcEEEeCC
Confidence 344455554444433 444322 2467899999987 3221 223 445655333322 2322 55666553
Q ss_pred cCCCCCccccEEEEEcccC---ccceEEecccccCCCCCCCC--CceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEc
Q 016774 225 RGVGYEVLNDVWFLDVYEG---FFKWVQIPYELQNIPAGFSL--PRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDT 299 (383)
Q Consensus 225 ~~~~~~~~~~v~~~~~~~~---~~~W~~i~~~~~~~~~~~p~--~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~ 299 (383)
... +.|.++|.... ...|+.+. ..+. ....+..+.-....+|+---.+.+....+.+.+||+
T Consensus 409 ~g~-----~~Vsvid~~~~~~~~~~~kvv~--------~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~ 475 (567)
T 1qks_A 409 MGD-----DSVALIGTDPEGHPDNAWKILD--------SFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDI 475 (567)
T ss_dssp SSS-----SEEEEEECCTTTCTTTBTSEEE--------EEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEG
T ss_pred CCC-----CeEEEecCCCCCCccccCEEEE--------EEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEEC
Confidence 221 24788887651 01287764 1111 111111111033467774433222122457999998
Q ss_pred CC
Q 016774 300 KA 301 (383)
Q Consensus 300 ~~ 301 (383)
.+
T Consensus 476 ~~ 477 (567)
T 1qks_A 476 KA 477 (567)
T ss_dssp GG
T ss_pred Cc
Confidence 74
No 154
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=29.35 E-value=4e+02 Score=25.79 Aligned_cols=173 Identities=8% Similarity=-0.068 Sum_probs=81.0
Q ss_pred EECCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCc--cccceeEEECCcEEEEEcccCCCCCcc
Q 016774 100 VIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPA--RGAHAACCIDNRKMVIHAGIGLYGLRL 177 (383)
Q Consensus 100 ~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~--r~~~~~~~~~~~~i~v~GG~~~~~~~~ 177 (383)
..++++|.+-- ..+.....+|+.+. ....|+.+...+..... ..........+++.+++.-. ..+..-
T Consensus 77 ~dG~~~~~~~~--~~~~~~~~l~~~~~-------~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~-~~G~~~ 146 (695)
T 2bkl_A 77 RRNGRFFYVRT--HKDKEKAILYWRQG-------ESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQK-PNAADE 146 (695)
T ss_dssp EETTEEEEEEE--CTTCSSCEEEEEES-------TTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEE-ETTCSC
T ss_pred EECCEEEEEEE--cCCCeEEEEEEEcC-------CCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEEC-CCCCce
Confidence 45677666532 22223455788776 35567766432211111 11122233345555555432 122234
Q ss_pred cceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCC-------CccccEEEEEcccCccce--E
Q 016774 178 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGY-------EVLNDVWFLDVYEGFFKW--V 248 (383)
Q Consensus 178 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~-------~~~~~v~~~~~~~~~~~W--~ 248 (383)
..++++|+.++ +..+ . ...+.... ...+-..+++.++++...... ....+|+++++.+ ..- .
T Consensus 147 ~~i~v~dl~tg----~~~~-~-~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t--~~~~~~ 217 (695)
T 2bkl_A 147 AVLHVIDVDSG----EWSK-V-DVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGT--EPSKDT 217 (695)
T ss_dssp CEEEEEETTTC----CBCS-S-CCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTS--CGGGCE
T ss_pred EEEEEEECCCC----CCcC-C-cccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCC--Cchhce
Confidence 57999999987 5431 1 11121111 223333456666666553210 2345699999987 432 2
Q ss_pred EecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 249 QIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 249 ~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
.+. .....+....+.....+++.+++...... ..+++|.++..
T Consensus 218 lv~-------~~~~~~~~~~~~~~SpDG~~l~~~~~~~~--~~~~l~~~~~~ 260 (695)
T 2bkl_A 218 VVH-------ERTGDPTTFLQSDLSRDGKYLFVYILRGW--SENDVYWKRPG 260 (695)
T ss_dssp EEE-------CCCCCTTCEEEEEECTTSCCEEEEEEETT--TEEEEEEECTT
T ss_pred EEE-------ecCCCCEEEEEEEECCCCCEEEEEEeCCC--CceEEEEEcCC
Confidence 331 11111222233333356665555543321 24578888764
No 155
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=28.83 E-value=3.1e+02 Score=24.42 Aligned_cols=20 Identities=20% Similarity=0.262 Sum_probs=14.5
Q ss_pred CEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 276 GRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 276 ~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
..+++.|+.++ .+.++|+.+
T Consensus 290 ~~~l~tg~~dg------~v~vwd~~~ 309 (430)
T 2xyi_A 290 EFILATGSADK------TVALWDLRN 309 (430)
T ss_dssp TTEEEEEETTS------EEEEEETTC
T ss_pred CCEEEEEeCCC------eEEEEeCCC
Confidence 34888888765 478899874
No 156
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=28.50 E-value=2.7e+02 Score=23.65 Aligned_cols=111 Identities=11% Similarity=0.109 Sum_probs=59.0
Q ss_pred eeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCcccc
Q 016774 155 AACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLND 234 (383)
Q Consensus 155 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 234 (383)
+++...++..++.|+.+ ..+.++|+.+. +-...-. . ......++..-.+++.++.|+.+. .
T Consensus 127 ~~~~spdg~~l~~g~~d------g~v~i~~~~~~----~~~~~~~-~--~~~~v~~~~~spdg~~lasg~~dg------~ 187 (321)
T 3ow8_A 127 TLAFSPDSQYLATGTHV------GKVNIFGVESG----KKEYSLD-T--RGKFILSIAYSPDGKYLASGAIDG------I 187 (321)
T ss_dssp CEEECTTSSEEEEECTT------SEEEEEETTTC----SEEEEEE-C--SSSCEEEEEECTTSSEEEEEETTS------C
T ss_pred EEEECCCCCEEEEEcCC------CcEEEEEcCCC----ceeEEec-C--CCceEEEEEECCCCCEEEEEcCCC------e
Confidence 34444555777777642 35788888775 2221111 1 111222333444567778877642 4
Q ss_pred EEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 235 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 235 v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
|.++|+.+ .+-...- .....+. .++....++.+++.|+.++ .+.++|+.+
T Consensus 188 i~iwd~~~--~~~~~~~-------~~h~~~v--~~l~~spd~~~l~s~s~dg------~i~iwd~~~ 237 (321)
T 3ow8_A 188 INIFDIAT--GKLLHTL-------EGHAMPI--RSLTFSPDSQLLVTASDDG------YIKIYDVQH 237 (321)
T ss_dssp EEEEETTT--TEEEEEE-------CCCSSCC--CEEEECTTSCEEEEECTTS------CEEEEETTT
T ss_pred EEEEECCC--CcEEEEE-------cccCCce--eEEEEcCCCCEEEEEcCCC------eEEEEECCC
Confidence 88999887 4332211 1111111 1222225778888888765 377888763
No 157
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=28.07 E-value=4.2e+02 Score=25.66 Aligned_cols=152 Identities=11% Similarity=0.040 Sum_probs=73.9
Q ss_pred cceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCC----------CcccceEEEeccCC
Q 016774 119 NDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYG----------LRLGDTWVLELSEN 188 (383)
Q Consensus 119 ~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~----------~~~~~~~~~d~~~~ 188 (383)
..++++|+ .+.+....... ... ....+...+++.++++...... .....++++++.++
T Consensus 151 ~~i~v~d~-------~tg~~~~~~~~----~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~ 218 (710)
T 2xdw_A 151 VTIKFMKV-------DGAKELPDVLE----RVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTD 218 (710)
T ss_dssp EEEEEEET-------TTTEEEEEEEE----EEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSC
T ss_pred EEEEEEEC-------CCCCCCccccc----Ccc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCC
Confidence 46899998 46666543221 111 2234444454544444432210 12345899998876
Q ss_pred cccCceE--EcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEccc------CccceEEecccccCCCCC
Q 016774 189 FCFGSWQ--QLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE------GFFKWVQIPYELQNIPAG 260 (383)
Q Consensus 189 ~~~~~W~--~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~------~~~~W~~i~~~~~~~~~~ 260 (383)
+.+ .+.. ....+........-.+++.+++.... .....++++++|+.+ ....+..+. ..
T Consensus 219 ----~~~~~~v~~-~~~~~~~~~~~~~SpDg~~l~~~~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~-------~~ 285 (710)
T 2xdw_A 219 ----QSEDILCAE-FPDEPKWMGGAELSDDGRYVLLSIRE-GCDPVNRLWYCDLQQESNGITGILKWVKLI-------DN 285 (710)
T ss_dssp ----GGGCEEEEC-CTTCTTCEEEEEECTTSCEEEEEEEC-SSSSCCEEEEEEGGGSSSSSCSSCCCEEEE-------CS
T ss_pred ----cccceEEec-cCCCCeEEEEEEEcCCCCEEEEEEEc-cCCCccEEEEEECcccccccCCccceEEee-------CC
Confidence 422 2211 11112222233333345545544331 111246799999874 222577774 11
Q ss_pred CCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 261 FSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 261 ~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
..... ......++.|++.+..+. ....++.+|+.+
T Consensus 286 -~~~~~--~~~s~dg~~l~~~s~~~~---~~~~l~~~d~~~ 320 (710)
T 2xdw_A 286 -FEGEY--DYVTNEGTVFTFKTNRHS---PNYRLINIDFTD 320 (710)
T ss_dssp -SSSCE--EEEEEETTEEEEEECTTC---TTCEEEEEETTS
T ss_pred -CCcEE--EEEeccCCEEEEEECCCC---CCCEEEEEeCCC
Confidence 11111 122225677888875433 245689999874
No 158
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=27.11 E-value=2.7e+02 Score=23.12 Aligned_cols=103 Identities=5% Similarity=-0.015 Sum_probs=50.3
Q ss_pred ceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECC-cEEEEEcccCCCCCcccceEEEeccCCcccCceEEc-
Q 016774 120 DTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDN-RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQL- 197 (383)
Q Consensus 120 ~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~- 197 (383)
.++++|+ .+.++..+...........-+.++...+ +.+|+.... +.+++||++ + +...+
T Consensus 47 ~i~~~d~-------~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g----~~~~~~ 107 (314)
T 1pjx_A 47 EILRIDL-------KTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-G----TFEEIA 107 (314)
T ss_dssp EEEEECT-------TTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-S----CEEECC
T ss_pred EEEEEeC-------CCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-C----CEEEEE
Confidence 5888887 3666655432100001111223334345 688887531 258999988 6 66555
Q ss_pred ccCC-CCCCCCCceEEEEcCCEEEEEcccC---------CCCCccccEEEEEcc
Q 016774 198 VTHP-SPPARSGHSLTRIGGNRTVLFGGRG---------VGYEVLNDVWFLDVY 241 (383)
Q Consensus 198 ~~~~-~p~~r~~~~~~~~~~~~i~v~GG~~---------~~~~~~~~v~~~~~~ 241 (383)
.... ......-+.++...++.+|+..... ........+++++..
T Consensus 108 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 108 KKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp SBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred eccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 3111 1111222344444456777765321 011112468888765
No 159
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=26.78 E-value=3.3e+02 Score=24.04 Aligned_cols=65 Identities=9% Similarity=0.068 Sum_probs=36.1
Q ss_pred CcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEc
Q 016774 161 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV 240 (383)
Q Consensus 161 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~ 240 (383)
++.+++.|+.+ ..+..+|+.+. +-...-. ..+......++....++.+++.|+.+. .|.++|+
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~----~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~~~dg------~i~iwd~ 243 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTL----ERLQIIE-NSPRHGAVSSICIDEECCVLILGTTRG------IIDIWDI 243 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTC----CEEEEEE-CCGGGCCEEEEEECTTSCEEEEEETTS------CEEEEET
T ss_pred CCCEEEEEeCC------CeEEEEeCCCC----eeeEEEc-cCCCCCceEEEEECCCCCEEEEEcCCC------eEEEEEc
Confidence 44677777642 45889998876 3322211 111112222333334566777777642 4889998
Q ss_pred cc
Q 016774 241 YE 242 (383)
Q Consensus 241 ~~ 242 (383)
.+
T Consensus 244 ~~ 245 (437)
T 3gre_A 244 RF 245 (437)
T ss_dssp TT
T ss_pred CC
Confidence 77
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=26.08 E-value=2.7e+02 Score=22.83 Aligned_cols=107 Identities=7% Similarity=0.033 Sum_probs=54.5
Q ss_pred CCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEE
Q 016774 160 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 239 (383)
Q Consensus 160 ~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~ 239 (383)
.++.+|+.+.. ....+.+||.+.. .-..+.. +....-+.++...++.+|+..... ..|++|+
T Consensus 87 ~~g~l~v~~~~-----~~~~i~~~d~~g~----~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~ 148 (286)
T 1q7f_A 87 NSGDIIVTERS-----PTHQIQIYNQYGQ----FVRKFGA---TILQHPRGVTVDNKGRIIVVECKV------MRVIIFD 148 (286)
T ss_dssp TTTEEEEEECG-----GGCEEEEECTTSC----EEEEECT---TTCSCEEEEEECTTSCEEEEETTT------TEEEEEC
T ss_pred CCCeEEEEcCC-----CCCEEEEECCCCc----EEEEecC---ccCCCceEEEEeCCCCEEEEECCC------CEEEEEc
Confidence 45688887632 1245888985543 2222221 111112334444456788765432 3588999
Q ss_pred cccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 240 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 240 ~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
... .....+. .......+ .+.++..++.+|+....+ ..+.+||.+
T Consensus 149 ~~g--~~~~~~~-----~~~~~~~p---~~i~~~~~g~l~v~~~~~------~~i~~~~~~ 193 (286)
T 1q7f_A 149 QNG--NVLHKFG-----CSKHLEFP---NGVVVNDKQEIFISDNRA------HCVKVFNYE 193 (286)
T ss_dssp TTS--CEEEEEE-----CTTTCSSE---EEEEECSSSEEEEEEGGG------TEEEEEETT
T ss_pred CCC--CEEEEeC-----CCCccCCc---EEEEECCCCCEEEEECCC------CEEEEEcCC
Confidence 765 4444442 01111111 223333567888876432 357888875
No 161
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=25.53 E-value=3e+02 Score=23.15 Aligned_cols=108 Identities=12% Similarity=0.069 Sum_probs=52.5
Q ss_pred CcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEE----EEcCCEEEEEcccCCCCCccccEE
Q 016774 161 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLT----RIGGNRTVLFGGRGVGYEVLNDVW 236 (383)
Q Consensus 161 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~----~~~~~~i~v~GG~~~~~~~~~~v~ 236 (383)
++..++.|+.+ ..+..+|+.+... ....+........+...++. .-.++.+++.|+.+ ..|.
T Consensus 128 ~~~~l~~~~~d------~~i~vwd~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d------~~i~ 193 (357)
T 3i2n_A 128 GAPEIVTGSRD------GTVKVWDPRQKDD--PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN------GDIK 193 (357)
T ss_dssp CCCEEEEEETT------SCEEEECTTSCSS--CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT------SEEE
T ss_pred CccEEEEEeCC------CeEEEEeCCCCCC--cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC------CeEE
Confidence 34566776642 3488888887510 12222210111111222222 11356677777653 2589
Q ss_pred EEEcccCccceEEecccccCCCCCCCCCceeeEEEEEc---CCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 237 FLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLIL---GGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 237 ~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~---~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
+||+.+ ..-.... ....+ -.++.... ++..++.|+.++ .+.++|+.
T Consensus 194 i~d~~~--~~~~~~~--------~~~~~--v~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~ 242 (357)
T 3i2n_A 194 LFDLRN--MALRWET--------NIKNG--VCSLEFDRKDISMNKLVATSLEG------KFHVFDMR 242 (357)
T ss_dssp EEETTT--TEEEEEE--------ECSSC--EEEEEESCSSSSCCEEEEEESTT------EEEEEEEE
T ss_pred EEECcc--Cceeeec--------CCCCc--eEEEEcCCCCCCCCEEEEECCCC------eEEEEeCc
Confidence 999987 4332221 11111 12222213 667778887654 47778875
No 162
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=24.98 E-value=4.9e+02 Score=25.39 Aligned_cols=150 Identities=13% Similarity=0.017 Sum_probs=72.7
Q ss_pred CCceEEEEeccCcccccc-eEEcCCCCCCCCcceeEEEECCEEEEEcCccCCCCCccceeeeecccccCCccc--ccEEE
Q 016774 64 LDDTWVAYVGNDFQGMLK-WQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGIT--LSWRL 140 (383)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~-W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~--~~W~~ 140 (383)
.+++|+++.... ... |+.+.... ......+...++.||+..-... ....++.+|+ .+ ..|..
T Consensus 293 ~~~l~~~d~~~~---~~~~~~~l~~~~--~~~~~~~~~dg~~l~~~s~~~~---~~~~l~~~d~-------~~~~~~~~~ 357 (741)
T 1yr2_A 293 VNTVHVARVTNG---KIGPVTALIPDL--KAQWDFVDGVGDQLWFVSGDGA---PLKKIVRVDL-------SGSTPRFDT 357 (741)
T ss_dssp CCEEEEEEEETT---EECCCEEEECSS--SSCEEEEEEETTEEEEEECTTC---TTCEEEEEEC-------SSSSCEEEE
T ss_pred cceEEEEECCCC---CCcccEEecCCC--CceEEEEeccCCEEEEEECCCC---CCCEEEEEeC-------CCCccccEE
Confidence 567888887432 114 66664211 1112223346777887754321 2346888888 34 47888
Q ss_pred ccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcC-CEE
Q 016774 141 LDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGG-NRT 219 (383)
Q Consensus 141 ~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~-~~i 219 (383)
+.+.. ... -...... ++.+++....+ ....++.+++..+ .-..+. .|..........-.+ +.+
T Consensus 358 l~~~~--~~~--l~~~~~~-~~~lv~~~~~d----g~~~l~~~~~~g~----~~~~l~---~~~~~~v~~~~~s~d~~~l 421 (741)
T 1yr2_A 358 VVPES--KDN--LESVGIA-GNRLFASYIHD----AKSQVLAFDLDGK----PAGAVS---LPGIGSASGLSGRPGDRHA 421 (741)
T ss_dssp EECCC--SSE--EEEEEEE-BTEEEEEEEET----TEEEEEEEETTSC----EEEECB---CSSSCEEEEEECCBTCSCE
T ss_pred EecCC--CCe--EEEEEEE-CCEEEEEEEEC----CEEEEEEEeCCCC----ceeecc---CCCCeEEEEeecCCCCCEE
Confidence 75432 111 1112223 44777665432 2456888887553 333332 221111111111112 233
Q ss_pred EEE-cccCCCCCccccEEEEEcccCccceEEe
Q 016774 220 VLF-GGRGVGYEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 220 ~v~-GG~~~~~~~~~~v~~~~~~~~~~~W~~i 250 (383)
++. .+. .....++.||+.+ .+.+.+
T Consensus 422 ~~~~ss~----~~P~~i~~~d~~t--g~~~~l 447 (741)
T 1yr2_A 422 YLSFSSF----TQPATVLALDPAT--AKTTPW 447 (741)
T ss_dssp EEEEEET----TEEEEEEEEETTT--TEEEEC
T ss_pred EEEEcCC----CCCCEEEEEECCC--CcEEEE
Confidence 322 222 1234699999988 666655
No 163
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=24.42 E-value=3.7e+02 Score=23.83 Aligned_cols=18 Identities=28% Similarity=0.519 Sum_probs=15.0
Q ss_pred ccceeEEECCcEEEEEcc
Q 016774 152 GAHAACCIDNRKMVIHAG 169 (383)
Q Consensus 152 ~~~~~~~~~~~~i~v~GG 169 (383)
..|+++...++.+|.+|-
T Consensus 168 ~~hs~alt~~G~v~~wG~ 185 (389)
T 3kci_A 168 GAHSACVTAAGDLYTWGK 185 (389)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred cCeEEEEeCCCeEEEeCC
Confidence 578888888889999984
No 164
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=24.37 E-value=6.2e+02 Score=26.35 Aligned_cols=109 Identities=11% Similarity=0.030 Sum_probs=55.4
Q ss_pred EEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEE
Q 016774 157 CCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVW 236 (383)
Q Consensus 157 ~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~ 236 (383)
+...++..++.||.+ ..+.++|+.+. +-...-. . ......++....++.+++.|+.+ ..|.
T Consensus 622 ~~s~~~~~l~s~~~d------~~i~vw~~~~~----~~~~~~~-~--h~~~v~~~~~s~~~~~l~s~~~d------~~v~ 682 (1249)
T 3sfz_A 622 CFSQDGQRIASCGAD------KTLQVFKAETG----EKLLDIK-A--HEDEVLCCAFSSDDSYIATCSAD------KKVK 682 (1249)
T ss_dssp EECTTSSEEEEEETT------SCEEEEETTTC----CEEEEEC-C--CSSCEEEEEECTTSSEEEEEETT------SEEE
T ss_pred EECCCCCEEEEEeCC------CeEEEEECCCC----CEEEEec-c--CCCCEEEEEEecCCCEEEEEeCC------CeEE
Confidence 334555677777642 34888898876 3222111 1 11112233333456677777763 2588
Q ss_pred EEEcccCccceEEecccccCCCCCCCCCceeeEEEEEc--CCEEEEEcCcCCCCCCCCcEEEEEcCC
Q 016774 237 FLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLIL--GGRVLIYGGEDSARRRKDDFWVLDTKA 301 (383)
Q Consensus 237 ~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~--~~~l~i~GG~~~~~~~~~~~~~~d~~~ 301 (383)
++|+.+ .+-...- .. ...... ++.... +..+++.|+.++ .+.++|+.+
T Consensus 683 vwd~~~--~~~~~~~-------~~-~~~~v~-~~~~~~~~~~~~l~sg~~d~------~v~vwd~~~ 732 (1249)
T 3sfz_A 683 IWDSAT--GKLVHTY-------DE-HSEQVN-CCHFTNKSNHLLLATGSNDF------FLKLWDLNQ 732 (1249)
T ss_dssp EEETTT--CCEEEEE-------EC-CSSCEE-EEEECSSSSCCEEEEEETTS------CEEEEETTS
T ss_pred EEECCC--CceEEEE-------cC-CCCcEE-EEEEecCCCceEEEEEeCCC------eEEEEECCC
Confidence 999987 5433321 11 111111 222112 344666666654 478888873
No 165
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=23.48 E-value=3.2e+02 Score=22.66 Aligned_cols=75 Identities=12% Similarity=0.078 Sum_probs=37.5
Q ss_pred eEEEEC--CEEEEEcCccCCCCCccceeeeecccccCCcccccEEEc-cCCCCCCCccccceeEEECCcEEEEEcccC--
Q 016774 97 TCVVIG--DCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLL-DVGSIAPPARGAHAACCIDNRKMVIHAGIG-- 171 (383)
Q Consensus 97 ~~~~~~--~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~-~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~-- 171 (383)
+++... +++|+.... +.++++|. . .+...+ ...........-+..+...++.+|+.....
T Consensus 75 ~i~~~~~~g~l~v~~~~-------~~l~~~d~-------~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 139 (314)
T 1pjx_A 75 GCQCDRDANQLFVADMR-------LGLLVVQT-------D-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEV 139 (314)
T ss_dssp EEEECSSSSEEEEEETT-------TEEEEEET-------T-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBC
T ss_pred eEEEecCCCcEEEEECC-------CCEEEEeC-------C-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccc
Confidence 444433 568887541 14888888 3 445444 221101111223344444566788765321
Q ss_pred -------CCCCcccceEEEecc
Q 016774 172 -------LYGLRLGDTWVLELS 186 (383)
Q Consensus 172 -------~~~~~~~~~~~~d~~ 186 (383)
........++++|++
T Consensus 140 ~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 140 APADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp TTSCCCBTTSSSCEEEEEECTT
T ss_pred ccccccccccCCCCeEEEECCC
Confidence 011123578999887
No 166
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=23.33 E-value=3.2e+02 Score=22.65 Aligned_cols=21 Identities=14% Similarity=0.030 Sum_probs=13.6
Q ss_pred cEEEEEcccCCCCCcccceEEEeccCC
Q 016774 162 RKMVIHAGIGLYGLRLGDTWVLELSEN 188 (383)
Q Consensus 162 ~~i~v~GG~~~~~~~~~~~~~~d~~~~ 188 (383)
+.+++.|+.+ ..+.++|+.+.
T Consensus 124 ~~~l~~~~~d------g~v~iwd~~~~ 144 (351)
T 3f3f_A 124 GLKLACLGND------GILRLYDALEP 144 (351)
T ss_dssp CSEEEEEETT------CEEEEEECSST
T ss_pred CcEEEEecCC------CcEEEecCCCh
Confidence 4667776642 34788887765
No 167
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=23.03 E-value=3.8e+02 Score=23.37 Aligned_cols=64 Identities=16% Similarity=0.077 Sum_probs=34.6
Q ss_pred CCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCE-EEEEcCcCCCCCCCCcE
Q 016774 216 GNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGR-VLIYGGEDSARRRKDDF 294 (383)
Q Consensus 216 ~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~-l~i~GG~~~~~~~~~~~ 294 (383)
++.+++.|+.+. .|.+||+.+ ..-.... ...... .-.++....++. +++.|+.++ .+
T Consensus 258 ~~~~l~~~~~dg------~i~i~d~~~--~~~~~~~------~~~~~~--~v~~~~~~~~~~~~l~~g~~dg------~i 315 (420)
T 3vl1_A 258 YGKYVIAGHVSG------VITVHNVFS--KEQTIQL------PSKFTC--SCNSLTVDGNNANYIYAGYENG------ML 315 (420)
T ss_dssp TTEEEEEEETTS------CEEEEETTT--CCEEEEE------CCTTSS--CEEEEEECSSCTTEEEEEETTS------EE
T ss_pred CCCEEEEEcCCC------eEEEEECCC--CceeEEc------ccccCC--CceeEEEeCCCCCEEEEEeCCC------eE
Confidence 466777776632 488999877 4322211 011111 112222224455 788887754 47
Q ss_pred EEEEcCC
Q 016774 295 WVLDTKA 301 (383)
Q Consensus 295 ~~~d~~~ 301 (383)
.++|+.+
T Consensus 316 ~vwd~~~ 322 (420)
T 3vl1_A 316 AQWDLRS 322 (420)
T ss_dssp EEEETTC
T ss_pred EEEEcCC
Confidence 8889874
No 168
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=22.62 E-value=5.2e+02 Score=24.80 Aligned_cols=109 Identities=10% Similarity=-0.051 Sum_probs=53.0
Q ss_pred ceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCC---CcccceEEEeccCCcccCceEE
Q 016774 120 DTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYG---LRLGDTWVLELSENFCFGSWQQ 196 (383)
Q Consensus 120 ~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~---~~~~~~~~~d~~~~~~~~~W~~ 196 (383)
.++++|+ .+.+-..+...... ........+...+++.++++...... .....++++|+.++ +-.+
T Consensus 38 ~i~~~d~-------~~g~~~~~~~~~~~-~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~----~~~~ 105 (723)
T 1xfd_A 38 TVRLWNV-------ETNTSTVLIEGKKI-ESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG----DPQS 105 (723)
T ss_dssp CEEEBCG-------GGCCCEEEECTTTT-TTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC----CCEE
T ss_pred CEEEEEC-------CCCcEEEEeccccc-cccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCC----ceEe
Confidence 5788888 35444433321101 00012334444555666665432111 12467999999987 5555
Q ss_pred cccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEe
Q 016774 197 LVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 197 ~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i 250 (383)
+........+... ...-.+++.++++.. .+|+++|+.+ ..-.++
T Consensus 106 l~~~~~~~~~~~~-~~~SPdG~~la~~~~-------~~i~~~~~~~--g~~~~~ 149 (723)
T 1xfd_A 106 LDPPEVSNAKLQY-AGWGPKGQQLIFIFE-------NNIYYCAHVG--KQAIRV 149 (723)
T ss_dssp CCCTTCCSCCCSB-CCBCSSTTCEEEEET-------TEEEEESSSS--SCCEEE
T ss_pred ccCCccccccccc-cEECCCCCEEEEEEC-------CeEEEEECCC--CceEEE
Confidence 5421111111111 112224555555443 2689999887 666665
No 169
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=22.55 E-value=3.2e+02 Score=22.39 Aligned_cols=194 Identities=10% Similarity=0.037 Sum_probs=0.0
Q ss_pred ceeeeCCEEEEEccccCCCCCCCceEEEEeccCcccccceEEcCCCCCCCCcceeEEEECCEEEEEcCccCCCCCcccee
Q 016774 43 SLNFVSNCLVLFGGGCEGGRHLDDTWVAYVGNDFQGMLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTW 122 (383)
Q Consensus 43 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 122 (383)
..+..++..++.|+ ....+.+++ .. +-.........+-.........+..++.|+.+. .+.
T Consensus 108 ~~~~~~~~~l~~~~------~d~~i~~~d--~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~------~i~ 168 (313)
T 3odt_A 108 CSLSFQDGVVISGS------WDKTAKVWK--EG-----SLVYNLQAHNASVWDAKVVSFSENKFLTASADK------TIK 168 (313)
T ss_dssp EEEEEETTEEEEEE------TTSEEEEEE--TT-----EEEEEEECCSSCEEEEEEEETTTTEEEEEETTS------CEE
T ss_pred EEEEecCCEEEEEe------CCCCEEEEc--CC-----cEEEecccCCCceeEEEEccCCCCEEEEEECCC------CEE
Q ss_pred eeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCC
Q 016774 123 IGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPS 202 (383)
Q Consensus 123 ~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~ 202 (383)
++|. ...-..+. .+....-.+++...++. ++.|+.+.. +..+|+.+. +.+. ..
T Consensus 169 i~d~--------~~~~~~~~----~~~~~~i~~~~~~~~~~-~~~~~~dg~------i~i~d~~~~------~~~~--~~ 221 (313)
T 3odt_A 169 LWQN--------DKVIKTFS----GIHNDVVRHLAVVDDGH-FISCSNDGL------IKLVDMHTG------DVLR--TY 221 (313)
T ss_dssp EEET--------TEEEEEEC----SSCSSCEEEEEEEETTE-EEEEETTSE------EEEEETTTC------CEEE--EE
T ss_pred EEec--------CceEEEEe----ccCcccEEEEEEcCCCe-EEEccCCCe------EEEEECCch------hhhh--hh
Q ss_pred CCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEc
Q 016774 203 PPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYG 282 (383)
Q Consensus 203 p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~G 282 (383)
......-..+.+..+..++.|+.+. .|.+||+.+ .+.... -..+.......+.. .+++ ++.|
T Consensus 222 ~~~~~~i~~~~~~~~~~l~~~~~dg------~v~iwd~~~--~~~~~~--------~~~~~~~i~~~~~~-~~~~-~~~~ 283 (313)
T 3odt_A 222 EGHESFVYCIKLLPNGDIVSCGEDR------TVRIWSKEN--GSLKQV--------ITLPAISIWSVDCM-SNGD-IIVG 283 (313)
T ss_dssp ECCSSCEEEEEECTTSCEEEEETTS------EEEEECTTT--CCEEEE--------EECSSSCEEEEEEC-TTSC-EEEE
T ss_pred hcCCceEEEEEEecCCCEEEEecCC------EEEEEECCC--CceeEE--------EeccCceEEEEEEc-cCCC-EEEE
Q ss_pred CcCCCCCCCCcEEEEEcCCCccccccccccccccccccccee
Q 016774 283 GEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKR 324 (383)
Q Consensus 283 G~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~ 324 (383)
+.++. +.++|+. +..+..
T Consensus 284 ~~dg~------i~iw~~~------------------~~~~~~ 301 (313)
T 3odt_A 284 SSDNL------VRIFSQE------------------KSRWAS 301 (313)
T ss_dssp ETTSC------EEEEESC------------------GGGCCC
T ss_pred eCCCc------EEEEeCC------------------CCceee
No 170
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=22.35 E-value=4.2e+02 Score=23.66 Aligned_cols=22 Identities=9% Similarity=0.238 Sum_probs=14.7
Q ss_pred CcEEEEEcccCCCCCcccceEEEeccCC
Q 016774 161 NRKMVIHAGIGLYGLRLGDTWVLELSEN 188 (383)
Q Consensus 161 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~ 188 (383)
++.+++.|+.+ ..+.++|+.+.
T Consensus 251 d~~~l~s~~~d------~~v~vwd~~~~ 272 (450)
T 2vdu_B 251 KDYLLLSAGGD------DKIFAWDWKTG 272 (450)
T ss_dssp STTEEEEEESS------SEEEEEETTTC
T ss_pred CCCEEEEEeCC------CeEEEEECCCC
Confidence 54677777642 35788888776
No 171
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=21.96 E-value=3.3e+02 Score=22.24 Aligned_cols=152 Identities=9% Similarity=-0.062 Sum_probs=74.6
Q ss_pred eeEEEE-CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCC
Q 016774 96 HTCVVI-GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYG 174 (383)
Q Consensus 96 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~ 174 (383)
++++.. ++++|+.... .+.++++|. +.+........ .....+..+...++.+|+...
T Consensus 102 ~~i~~~~~g~l~v~~~~------~~~i~~~d~--------~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~----- 159 (299)
T 2z2n_A 102 YGITEGPNGDIWFTEMN------GNRIGRITD--------DGKIREYELPN---KGSYPSFITLGSDNALWFTEN----- 159 (299)
T ss_dssp EEEEECTTSCEEEEETT------TTEEEEECT--------TCCEEEEECSS---TTCCEEEEEECTTSCEEEEET-----
T ss_pred eeeEECCCCCEEEEecC------CceEEEECC--------CCCEEEecCCC---CCCCCceEEEcCCCCEEEEeC-----
Confidence 444444 3568876432 124778877 33333332211 111223444444567888642
Q ss_pred CcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccc
Q 016774 175 LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYEL 254 (383)
Q Consensus 175 ~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~ 254 (383)
....++++|+ ++ +...... +.. ...-..++...++.+|+.... .+.+.+|++ + .+...+.
T Consensus 160 -~~~~i~~~~~-~g----~~~~~~~-~~~-~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~-~--g~~~~~~--- 219 (299)
T 2z2n_A 160 -QNNAIGRITE-SG----DITEFKI-PTP-ASGPVGITKGNDDALWFVEII------GNKIGRITT-S--GEITEFK--- 219 (299)
T ss_dssp -TTTEEEEECT-TC----CEEEEEC-SST-TCCEEEEEECTTSSEEEEETT------TTEEEEECT-T--CCEEEEE---
T ss_pred -CCCEEEEEcC-CC----cEEEeeC-CCC-CCcceeEEECCCCCEEEEccC------CceEEEECC-C--CcEEEEE---
Confidence 1246899998 55 5655431 111 111123334344667776432 125899998 6 6666552
Q ss_pred cCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 255 QNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 255 ~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
... ..... .++....++.||+.... .+.+.++|+.
T Consensus 220 --~~~--~~~~~-~~i~~~~~g~l~v~~~~------~~~i~~~d~~ 254 (299)
T 2z2n_A 220 --IPT--PNARP-HAITAGAGIDLWFTEWG------ANKIGRLTSN 254 (299)
T ss_dssp --CSS--TTCCE-EEEEECSTTCEEEEETT------TTEEEEEETT
T ss_pred --CCC--CCCCc-eeEEECCCCCEEEeccC------CceEEEECCC
Confidence 011 11111 23333246778776522 2347888874
No 172
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=21.71 E-value=3.8e+02 Score=22.86 Aligned_cols=112 Identities=8% Similarity=-0.014 Sum_probs=55.7
Q ss_pred CEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceEE
Q 016774 103 DCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWV 182 (383)
Q Consensus 103 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 182 (383)
+.+|+++-.. ..++++|+ .+.+...+.. +. .-++.+...++.+++... +.+++
T Consensus 61 ~~l~~~d~~~------~~i~~~d~-------~~~~~~~~~~----~~--~v~~i~~~~dg~l~v~~~--------~gl~~ 113 (326)
T 2ghs_A 61 GTAWWFNILE------RELHELHL-------ASGRKTVHAL----PF--MGSALAKISDSKQLIASD--------DGLFL 113 (326)
T ss_dssp TEEEEEEGGG------TEEEEEET-------TTTEEEEEEC----SS--CEEEEEEEETTEEEEEET--------TEEEE
T ss_pred CEEEEEECCC------CEEEEEEC-------CCCcEEEEEC----CC--cceEEEEeCCCeEEEEEC--------CCEEE
Confidence 5677775432 25888888 3444433322 11 122334445567777531 24999
Q ss_pred EeccCCcccCceEEcccCC--CCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEe
Q 016774 183 LELSENFCFGSWQQLVTHP--SPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 250 (383)
Q Consensus 183 ~d~~~~~~~~~W~~~~~~~--~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i 250 (383)
+|++++ +.+.+.... .+..+ ...++...++.+|+.............+|+++ . .+...+
T Consensus 114 ~d~~~g----~~~~~~~~~~~~~~~~-~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~--g~~~~~ 174 (326)
T 2ghs_A 114 RDTATG----VLTLHAELESDLPGNR-SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K--GKVTKL 174 (326)
T ss_dssp EETTTC----CEEEEECSSTTCTTEE-EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T--TEEEEE
T ss_pred EECCCC----cEEEEeeCCCCCCCCC-CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C--CcEEEe
Confidence 999887 776654111 11111 12233334566765332111112234688888 4 444444
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=21.63 E-value=5.2e+02 Score=24.47 Aligned_cols=122 Identities=9% Similarity=-0.060 Sum_probs=59.2
Q ss_pred eEEECCcEEEEEcccCCC----CCcccceEEEeccC------CcccCceEEcc-cCCCCCCCCCceEEEEcCCEEEEEcc
Q 016774 156 ACCIDNRKMVIHAGIGLY----GLRLGDTWVLELSE------NFCFGSWQQLV-THPSPPARSGHSLTRIGGNRTVLFGG 224 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~----~~~~~~~~~~d~~~------~~~~~~W~~~~-~~~~p~~r~~~~~~~~~~~~i~v~GG 224 (383)
.+...+++.+++...... .....+++++|+.+ + .-..+. ... ........-.+++.+++..
T Consensus 135 ~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~~l~~~~~----~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 135 PVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS----AVRELSDDAH----RFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp EEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG----GSEESSCSCS----SEECCCEECTTSSEEEEEE
T ss_pred cEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC----ceeEEEecCC----CcccCceECCCCCEEEEEE
Confidence 334445455555443211 12346899999987 5 445443 211 1111222223455555554
Q ss_pred cCCCCC--ccccEEEEEcc-cCcc---ceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEE
Q 016774 225 RGVGYE--VLNDVWFLDVY-EGFF---KWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLD 298 (383)
Q Consensus 225 ~~~~~~--~~~~v~~~~~~-~~~~---~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d 298 (383)
...... ...+|+++|++ + . ....+. .. . ...-.......++++++.+..++ ...+|.+|
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~--g~~~~~~~l~-------~~-~-~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~ 271 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTED--GRFADTRTLL-------GG-P-EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVD 271 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTT--SCEEEEEEEE-------EE-T-TBCEEEEEECTTSCEEEEECTTS----SCEEEEEC
T ss_pred CCCCCCCCCCcEEEEEEECCC--CcccccEEeC-------CC-C-CceEcceEECCCCeEEEEECCCC----CeEEEEEE
Confidence 322111 12479999998 5 4 344442 10 0 11112222225677777665543 34689998
Q ss_pred cC
Q 016774 299 TK 300 (383)
Q Consensus 299 ~~ 300 (383)
++
T Consensus 272 ~~ 273 (662)
T 3azo_A 272 PA 273 (662)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 174
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=21.53 E-value=5.1e+02 Score=24.38 Aligned_cols=93 Identities=9% Similarity=0.078 Sum_probs=45.3
Q ss_pred eEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCC
Q 016774 180 TWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPA 259 (383)
Q Consensus 180 ~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~ 259 (383)
...|.-+.+ -+|+... ..+......+++.+.++.|++.--..... ...++.......+|+... ....
T Consensus 354 ~i~~S~D~G---~TW~~~~--~~~~~~~e~~vve~~dG~L~~~~R~~~~g----~r~v~~S~D~G~TWt~~~----~~~~ 420 (523)
T 4fj6_A 354 GIMYSKDRG---KTWHLHN--LARTNTTEAQVAEVEPGVLMLNMRDNRGG----SRAVATTKDLGKTWTEHP----SSRS 420 (523)
T ss_dssp EEEEESSTT---SSCEECC--CSEETEEEEEEEEEETTEEEEEEEETTCS----BCEEEEESSTTSSCEECT----TTTT
T ss_pred EEEEECCCC---CeEEECC--CCCccccCCEEEEecCCEEEEEEEecCCC----cEEEEEECCCCCccCcCc----Cccc
Confidence 345554432 3898875 22323333445556668888753221111 122333332337899873 1123
Q ss_pred CCCCCceeeEEEEEc------CCEEEEEcCcC
Q 016774 260 GFSLPRVGHSATLIL------GGRVLIYGGED 285 (383)
Q Consensus 260 ~~p~~r~~~~~~~~~------~~~l~i~GG~~ 285 (383)
.+|.|....+++.+. +..++++..-.
T Consensus 421 ~L~~P~c~~Sii~~~~~~~~~g~~~lL~snp~ 452 (523)
T 4fj6_A 421 ALQESVCMASLIKVNAKDNITGKDLLLFSNPN 452 (523)
T ss_dssp SSBCSSCCCEEEEECGGGSTTCSCEEEEEEEC
T ss_pred cCCCCCcccEEEEEecccCCCCCcEEEEEccC
Confidence 456666555555432 13566666543
No 175
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=21.49 E-value=3.8e+02 Score=22.83 Aligned_cols=107 Identities=10% Similarity=0.093 Sum_probs=56.1
Q ss_pred cEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcc
Q 016774 162 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY 241 (383)
Q Consensus 162 ~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~ 241 (383)
+.+|+.+.. -..+++||++++ +...... + ...++++...++.+++... ..++++|+.
T Consensus 61 ~~l~~~d~~------~~~i~~~d~~~~----~~~~~~~---~--~~v~~i~~~~dg~l~v~~~--------~gl~~~d~~ 117 (326)
T 2ghs_A 61 GTAWWFNIL------ERELHELHLASG----RKTVHAL---P--FMGSALAKISDSKQLIASD--------DGLFLRDTA 117 (326)
T ss_dssp TEEEEEEGG------GTEEEEEETTTT----EEEEEEC---S--SCEEEEEEEETTEEEEEET--------TEEEEEETT
T ss_pred CEEEEEECC------CCEEEEEECCCC----cEEEEEC---C--CcceEEEEeCCCeEEEEEC--------CCEEEEECC
Confidence 477777543 246899999886 5444431 2 1223344445677777531 249999998
Q ss_pred cCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEE
Q 016774 242 EGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLD 298 (383)
Q Consensus 242 ~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d 298 (383)
+ .+.+.+. ......+..+.. ...+..++.+|+.............+|.++
T Consensus 118 ~--g~~~~~~----~~~~~~~~~~~~-~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 118 T--GVLTLHA----ELESDLPGNRSN-DGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp T--CCEEEEE----CSSTTCTTEEEE-EEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred C--CcEEEEe----eCCCCCCCCCCC-CEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 8 7777663 001111222222 233335677776331111111234688888
No 176
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=21.14 E-value=4.3e+02 Score=23.33 Aligned_cols=66 Identities=6% Similarity=0.029 Sum_probs=35.3
Q ss_pred EECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEE
Q 016774 158 CIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWF 237 (383)
Q Consensus 158 ~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~ 237 (383)
...++.+++.|+.+ ..+.++|+.+. .-...- . .......++....++..++.|+.+. .|.+
T Consensus 158 ~~~~~~~l~sgs~D------~~i~iwd~~~~----~~~~~~--~-~h~~~V~~v~~~p~~~~l~s~s~D~------~i~~ 218 (410)
T 1vyh_C 158 FDHSGKLLASCSAD------MTIKLWDFQGF----ECIRTM--H-GHDHNVSSVSIMPNGDHIVSASRDK------TIKM 218 (410)
T ss_dssp ECTTSSEEEEEETT------SCCCEEETTSS----CEEECC--C-CCSSCEEEEEECSSSSEEEEEETTS------EEEE
T ss_pred EcCCCCEEEEEeCC------CeEEEEeCCCC----ceeEEE--c-CCCCCEEEEEEeCCCCEEEEEeCCC------eEEE
Confidence 33455777777753 23667777664 322211 1 1111122333334466777777642 5888
Q ss_pred EEccc
Q 016774 238 LDVYE 242 (383)
Q Consensus 238 ~~~~~ 242 (383)
+|+.+
T Consensus 219 wd~~~ 223 (410)
T 1vyh_C 219 WEVQT 223 (410)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99887
No 177
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=20.34 E-value=5.1e+02 Score=23.91 Aligned_cols=110 Identities=8% Similarity=0.042 Sum_probs=56.1
Q ss_pred eEEECCcEEEEEcccCCCCCcccceEEEeccCCcccCceEEcccCCCCCCCCCceEEEEc----------CCEEEEEccc
Q 016774 156 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG----------GNRTVLFGGR 225 (383)
Q Consensus 156 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~----------~~~i~v~GG~ 225 (383)
++...++.+++.|+.+ ..+.++|+.+. +.+............++.... ++.+++.|+.
T Consensus 494 ~~~s~~g~~l~~~~~d------g~i~iw~~~~~------~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~ 561 (615)
T 1pgu_A 494 ISISPSETYIAAGDVM------GKILLYDLQSR------EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSL 561 (615)
T ss_dssp EEECTTSSEEEEEETT------SCEEEEETTTT------EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEET
T ss_pred EEECCCCCEEEEcCCC------CeEEEeeCCCC------cceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcC
Confidence 3334455777777742 34888998876 333311111122222233333 5678888876
Q ss_pred CCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 226 GVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 226 ~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
+. .|.++|+.+.......+ ..... ... ++....++. ++.||.++ .+.+++++
T Consensus 562 dg------~i~iw~~~~~~~~~~~~--------~~h~~-~v~-~l~~s~~~~-l~s~~~d~------~v~iw~~~ 613 (615)
T 1pgu_A 562 DT------NIFIYSVKRPMKIIKAL--------NAHKD-GVN-NLLWETPST-LVSSGADA------CIKRWNVV 613 (615)
T ss_dssp TS------CEEEEESSCTTCCEEET--------TSSTT-CEE-EEEEEETTE-EEEEETTS------CEEEEEEC
T ss_pred CC------cEEEEECCCCceechhh--------hcCcc-ceE-EEEEcCCCC-eEEecCCc------eEEEEeee
Confidence 42 58999998711122222 11111 222 222236777 77777755 25566654
No 178
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=20.30 E-value=4.2e+02 Score=22.82 Aligned_cols=62 Identities=21% Similarity=0.228 Sum_probs=35.9
Q ss_pred CEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCCCCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEE
Q 016774 217 NRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWV 296 (383)
Q Consensus 217 ~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~ 296 (383)
+.+++.|+.+. .|.++|+.+ .+....- ..... .. .++....++.+++.|+.++ .+.+
T Consensus 210 g~~l~sgs~Dg------~v~~wd~~~--~~~~~~~-------~~h~~-~v-~~v~~~p~~~~l~s~s~D~------~v~l 266 (354)
T 2pbi_B 210 GNTFVSGGCDK------KAMVWDMRS--GQCVQAF-------ETHES-DV-NSVRYYPSGDAFASGSDDA------TCRL 266 (354)
T ss_dssp CCEEEEEETTS------CEEEEETTT--CCEEEEE-------CCCSS-CE-EEEEECTTSSEEEEEETTS------CEEE
T ss_pred CCEEEEEeCCC------eEEEEECCC--CcEEEEe-------cCCCC-Ce-EEEEEeCCCCEEEEEeCCC------eEEE
Confidence 46788887742 488999987 5544331 11111 11 1222225677888888765 3778
Q ss_pred EEcCC
Q 016774 297 LDTKA 301 (383)
Q Consensus 297 ~d~~~ 301 (383)
+|+.+
T Consensus 267 wd~~~ 271 (354)
T 2pbi_B 267 YDLRA 271 (354)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 88763
No 179
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=20.21 E-value=4.3e+02 Score=22.95 Aligned_cols=158 Identities=8% Similarity=0.001 Sum_probs=0.0
Q ss_pred CCEEEEEcCccCCCCCccceeeeecccccCCcccccEEEccCCCCCCCccccceeEEECCcEEEEEcccCCCCCcccceE
Q 016774 102 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTW 181 (383)
Q Consensus 102 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~ 181 (383)
++.+++.|+.+. .+.++|+ ...-..+... ......-.+++...++..++.|+.+.. +.
T Consensus 217 ~~~~l~sgs~D~------~v~~wd~--------~~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~s~s~D~~------i~ 274 (380)
T 3iz6_a 217 NANMFISGSCDT------TVRLWDL--------RITSRAVRTY--HGHEGDINSVKFFPDGQRFGTGSDDGT------CR 274 (380)
T ss_dssp SCCEEEEEETTS------CEEEEET--------TTTCCCCEEE--CCCSSCCCEEEECTTSSEEEEECSSSC------EE
T ss_pred CCCEEEEEECCC------eEEEEEC--------CCCCcceEEE--CCcCCCeEEEEEecCCCeEEEEcCCCe------EE
Q ss_pred EEeccCCcccCceEEcccCCCCCCCCCceEEEEcCCEEEEEcccCCCCCccccEEEEEcccCccceEEecccccCCCCCC
Q 016774 182 VLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGF 261 (383)
Q Consensus 182 ~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~~~~~~~~~~W~~i~~~~~~~~~~~ 261 (383)
.+|+.++..-..+...............+++.-.++.+++.|+.+. .|.++|+.. ..-.... ......
T Consensus 275 lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg------~i~vwd~~~--~~~~~~~----~~~~~~ 342 (380)
T 3iz6_a 275 LFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG------DCYVWDTLL--AEMVLNL----GTLQNS 342 (380)
T ss_dssp EEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS------CEEEEETTT--CCEEEEE----CCSCSS
T ss_pred EEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC------CEEEEECCC--CceEEEE----ecccCC
Q ss_pred CCCceeeEEEEEcCCEEEEEcCcCCCCCCCCcEEEEEcC
Q 016774 262 SLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 300 (383)
Q Consensus 262 p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~ 300 (383)
...+....+.. .++.+++.|+.++. +.+++++
T Consensus 343 h~~~v~~l~~s-~dg~~l~sgs~D~~------i~iW~~~ 374 (380)
T 3iz6_a 343 HEGRISCLGLS-SDGSALCTGSWDKN------LKIWAFS 374 (380)
T ss_dssp CCCCCCEEEEC-SSSSEEEEECTTSC------EEEEECC
T ss_pred CCCceEEEEEC-CCCCEEEEeeCCCC------EEEEecC
Done!