Your job contains 1 sequence.
>016775
MEDSFKLSPGSSMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQIC
DNCRAEPVSVRCCTENLMLCQDCDWDSHYNSSVSSVHERSSVEGFSGCPSVTELASFFDL
MGDDLLNLGSGFGVYEPKMLNFEELAVPTQNCSVFMSGNKYKKEVYEQLVEIGKRDLVRF
NGNGAELGPGTTTSICDQYGYTQSLEVENIDEEKLLNPKTAFTSLLAFPNNTDLREHDRC
VADGKLMWDWDPSYPAAQFQNHSNQPFSSHTPTTEESNNTPIIGPPSDYRPHEFETWEST
KVVQGMHHSILHGSETANEAITQFDKELLAKNRGNAMLRYKEKKKNRSYGKQIRYESRKA
RADTRKRVKGRFVKASEISDVEI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016775
(383 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2010504 - symbol:BBX13 "B-box domain protein 1... 355 1.9e-57 3
TAIR|locus:2043288 - symbol:AT2G47890 species:3702 "Arabi... 306 5.9e-42 2
TAIR|locus:2164718 - symbol:BBX8 "B-box domain protein 8"... 289 2.0e-41 2
TAIR|locus:2129860 - symbol:BBX9 "B-box domain protein 9"... 246 1.9e-40 3
TAIR|locus:2091082 - symbol:COL9 "CONSTANS-like 9" specie... 401 2.4e-37 1
TAIR|locus:2051104 - symbol:BBX12 "B-box domain protein 1... 386 9.2e-36 1
TAIR|locus:2088748 - symbol:BBX10 "B-box domain protein 1... 240 1.7e-34 2
TAIR|locus:2047246 - symbol:COL3 "CONSTANS-like 3" specie... 180 6.0e-22 2
TAIR|locus:2143221 - symbol:COL1 "CONSTANS-like 1" specie... 182 2.0e-21 2
TAIR|locus:2074587 - symbol:COL2 "CONSTANS-like 2" specie... 177 2.2e-21 2
TAIR|locus:2143206 - symbol:CO "CONSTANS" species:3702 "A... 191 2.4e-21 2
UNIPROTKB|Q9FDX8 - symbol:HD1 "Zinc finger protein HD1" s... 170 2.5e-20 2
UNIPROTKB|Q9FE92 - symbol:Hd1 "Heading day 1" species:453... 167 6.5e-20 2
TAIR|locus:2172545 - symbol:COL5 "CONSTANS-like 5" specie... 156 8.1e-20 2
TAIR|locus:2199262 - symbol:BBX27 "B-box domain protein 2... 246 1.5e-19 1
TAIR|locus:2207155 - symbol:AT1G05290 species:3702 "Arabi... 158 1.1e-16 3
TAIR|locus:2028421 - symbol:BBX17 "B-box domain protein 1... 124 1.1e-12 2
TAIR|locus:2201277 - symbol:BBX14 "B-box domain protein 1... 121 5.6e-12 2
TAIR|locus:2031581 - symbol:BBX16 "B-box domain protein 1... 126 7.2e-12 2
TAIR|locus:2031180 - symbol:BBX15 "B-box domain protein 1... 117 1.4e-11 2
TAIR|locus:2050130 - symbol:BBX18 "B-box domain protein 1... 158 6.2e-11 1
UNIPROTKB|Q9FRZ6 - symbol:Q9FRZ6 "Hd1" species:4530 "Oryz... 167 2.0e-10 1
UNIPROTKB|Q9FRZ7 - symbol:Hd1 "Hd1 protein" species:39946... 170 3.3e-10 1
TAIR|locus:2195643 - symbol:BBX26 "B-box domain protein 2... 158 2.2e-09 1
TAIR|locus:2005624 - symbol:BBX21 "B-box domain protein 2... 158 5.2e-09 2
TAIR|locus:1009023318 - symbol:BBX30 "B-box domain protei... 137 1.2e-08 1
TAIR|locus:2061330 - symbol:STH "salt tolerance homologue... 145 6.8e-08 1
TAIR|locus:2198841 - symbol:STO "SALT TOLERANCE" species:... 145 8.4e-08 1
TAIR|locus:2095562 - symbol:BBX31 "B-box domain protein 3... 124 3.2e-07 1
TAIR|locus:2092940 - symbol:BBX32 "B-box domain protein 3... 135 8.6e-07 1
TAIR|locus:2007482 - symbol:AT1G07050 "AT1G07050" species... 124 1.5e-06 2
TAIR|locus:2145698 - symbol:AT5G14370 species:3702 "Arabi... 137 1.9e-06 1
TAIR|locus:2120207 - symbol:BZS1 "BZS1" species:3702 "Ara... 129 6.2e-06 1
TAIR|locus:2131709 - symbol:BBX28 "B-box domain protein 2... 124 9.7e-06 2
TAIR|locus:2175564 - symbol:CIA2 "chloroplast import appa... 129 2.4e-05 1
TAIR|locus:2122759 - symbol:bbx23 "B-box domain protein 2... 113 4.1e-05 1
TAIR|locus:2132902 - symbol:AT4G27900 "AT4G27900" species... 122 5.1e-05 1
TAIR|locus:2178441 - symbol:AT5G53420 "AT5G53420" species... 122 5.2e-05 1
TAIR|locus:2147274 - symbol:BBX29 "B-box domain protein 2... 115 0.00018 1
TAIR|locus:2168083 - symbol:AT5G59990 "AT5G59990" species... 114 0.00034 1
TAIR|locus:2018344 - symbol:AT1G04500 "AT1G04500" species... 117 0.00042 1
TAIR|locus:2062749 - symbol:AT2G46670 "AT2G46670" species... 109 0.00048 1
TAIR|locus:2177911 - symbol:AT5G41380 "AT5G41380" species... 106 0.00084 2
>TAIR|locus:2010504 [details] [associations]
symbol:BBX13 "B-box domain protein 13" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AC069471
HOGENOM:HOG000243233 ProtClustDB:CLSN2713949 EMBL:AY037206
EMBL:BT002681 IPI:IPI00538865 PIR:B86406 RefSeq:NP_174126.1
UniGene:At.19754 ProteinModelPortal:Q9C7E8 SMR:Q9C7E8 IntAct:Q9C7E8
STRING:Q9C7E8 PRIDE:Q9C7E8 EnsemblPlants:AT1G28050.1 GeneID:839698
KEGG:ath:AT1G28050 TAIR:At1g28050 eggNOG:NOG245106
InParanoid:Q9C7E8 OMA:SCGRYKQ PhylomeDB:Q9C7E8
Genevestigator:Q9C7E8 GermOnline:AT1G28050 Uniprot:Q9C7E8
Length = 433
Score = 355 (130.0 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 64/110 (58%), Positives = 77/110 (70%)
Query: 11 SSMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSV 70
SS CDFC + AVL+C AD+AKLCL CDQQ+H+AN LS +H+RSQICDNC EPVSV
Sbjct: 3 SSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSV 62
Query: 71 RCCTENLMLCQDCDWDSHYNXXXXXXXXXXXXXGFSGCPSVTELASFFDL 120
RC T+NL+LCQ+CDWD H + GFSGCPS ELA+ + L
Sbjct: 63 RCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGL 112
Score = 220 (82.5 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 55/107 (51%), Positives = 65/107 (60%)
Query: 272 PTTEESNNTPI-IGPPSDYRPHEFETWESTKVVQGMHHSILHGSETANEAITQFDKELLA 330
PT ESNN PI G S+ + T+ + G +T T+ D E LA
Sbjct: 331 PTKSESNNRPITFG--SEKGSNSSSDLHFTEHIAGT------SCKTTRLVATKADLERLA 382
Query: 331 KNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASE 377
+NRG+AM RYKEK+K R Y K IRYESRKARADTR RV+GRFVKASE
Sbjct: 383 QNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVKASE 429
Score = 45 (20.9 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 22/75 (29%), Positives = 35/75 (46%)
Query: 132 FGVY-EPKMLNFEELAVPTQNC-----SVFMSGNKYKKEVYEQLVEIGKRDLVRFNGNGA 185
FG+ + +L EL VP+ S S +YK+ + +QL E+ K +V G+G
Sbjct: 135 FGMQLDSWVLGSNELIVPSDTTFKKRGSCGSSCGRYKQVLCKQLEELLKSGVV--GGDGD 192
Query: 186 ELGPGTTTSICDQYG 200
+ G CD+ G
Sbjct: 193 D---GDRDRDCDREG 204
>TAIR|locus:2043288 [details] [associations]
symbol:AT2G47890 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC005309 EMBL:AC006072 EMBL:BT023413 IPI:IPI00543399
PIR:G84920 RefSeq:NP_182310.1 UniGene:At.12948 STRING:O82256
EnsemblPlants:AT2G47890.1 GeneID:819401 KEGG:ath:AT2G47890
TAIR:At2g47890 eggNOG:NOG271369 HOGENOM:HOG000240051
InParanoid:O82256 OMA:CSRHARA PhylomeDB:O82256
ProtClustDB:CLSN2683730 Genevestigator:O82256 Uniprot:O82256
Length = 332
Score = 306 (112.8 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 60/132 (45%), Positives = 80/132 (60%)
Query: 16 LCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRCCTE 75
LCD+C+S +A++YC ADSAKLCL CD+Q+H AN L +H RS +CD+C P S+ C TE
Sbjct: 12 LCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETE 71
Query: 76 NLMLCQDCDWDSHYNXXXXXXXXXXXXXGFSGCPSVTELASFFDLMGDDLLNLGSGFGVY 135
+LCQ+CDW H GF+GCPSV EL + L DDL L SG
Sbjct: 72 RSVLCQNCDWQHH--TASSSLHSRRPFEGFTGCPSVPELLAIVGL--DDL-TLDSGLLWE 126
Query: 136 EPKMLNFEELAV 147
P++++ +L V
Sbjct: 127 SPEIVSLNDLIV 138
Score = 155 (59.6 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 327 ELLAKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASE 377
E+ + R +A+ RYKEKKK+R Y K IRYESRK RA++R R++GRF KA++
Sbjct: 281 EINSLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKAAD 331
Score = 67 (28.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 54 HLRSQICDNCRAEPVSVRCCTENLMLCQDCDWDSH 88
H R ++CD C + V C ++ LC CD H
Sbjct: 7 HQRDRLCDYCDSSVALVYCKADSAKLCLACDKQVH 41
>TAIR|locus:2164718 [details] [associations]
symbol:BBX8 "B-box domain protein 8" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005886 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB023039 EMBL:AY039957 EMBL:AY142607
IPI:IPI00527282 RefSeq:NP_199636.1 UniGene:At.7080
ProteinModelPortal:Q9LUA9 IntAct:Q9LUA9 STRING:Q9LUA9
EnsemblPlants:AT5G48250.1 GeneID:834878 KEGG:ath:AT5G48250
TAIR:At5g48250 eggNOG:NOG248444 HOGENOM:HOG000116529
InParanoid:Q9LUA9 OMA:ESACEQG PhylomeDB:Q9LUA9
ProtClustDB:CLSN2684850 Genevestigator:Q9LUA9 GermOnline:AT5G48250
Uniprot:Q9LUA9
Length = 373
Score = 289 (106.8 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 52/117 (44%), Positives = 71/117 (60%)
Query: 16 LCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRCCTE 75
+CDFC + +++YC +D+A LCL CD+ +HSANALS RH R+ +C+ C A+P SVRC E
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDE 63
Query: 76 NLMLCQDCDWDSH--YNXXXXXXXXXXXXXGFSGCPSVTELASFFDLMGDDLLNLGS 130
+ LCQ+CDW H N +SGCPS EL+S + D LN+ S
Sbjct: 64 RVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSFCMD--LNISS 118
Score = 167 (63.8 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 330 AKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASEISDVE 382
A R NA++RYKEKKK R + K++RY SRK RAD R+RVKGRFVK+ E D +
Sbjct: 313 ATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEAYDYD 365
Score = 74 (31.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 7 LSPGSSMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSA-NALSLRHLRSQICDNC 63
LS S +C+ CN++ A + C+ + LC CD H N+ + H + Q NC
Sbjct: 38 LSKRHSRTLVCERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKRQTI-NC 94
Score = 43 (20.2 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 284 GPPSDYRPHEFETWESTKVVQGMHHS-ILHGSETANE-AITQ--FDKELLAKNRGNAMLR 339
G S + E E++ QGM HS + S A E + + F+ L++ A+
Sbjct: 139 GEKSGVQKINVEQPETSSAAQGMDHSSVPENSSMAKELGVCEDDFNGNLISDEVDLALEN 198
Query: 340 YKE 342
Y+E
Sbjct: 199 YEE 201
>TAIR|locus:2129860 [details] [associations]
symbol:BBX9 "B-box domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006863 "purine
nucleobase transport" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:Z97338 EMBL:AL161541 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 HOGENOM:HOG000116529 IPI:IPI00529586
PIR:F71416 RefSeq:NP_193260.2 UniGene:At.54335
EnsemblPlants:AT4G15250.1 GeneID:827191 KEGG:ath:AT4G15250
TAIR:At4g15250 eggNOG:NOG321931 InParanoid:O23379 OMA:YQDCGIS
PhylomeDB:O23379 ProtClustDB:CLSN2915042 Genevestigator:O23379
GermOnline:AT4G15250 Uniprot:O23379
Length = 330
Score = 246 (91.7 bits), Expect = 1.9e-40, Sum P(3) = 1.9e-40
Identities = 44/106 (41%), Positives = 61/106 (57%)
Query: 13 MLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRC 72
M A CDFC ++ A++YC +DSAKLCL CD +HSAN LS RH RS +C+ C +P +V C
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHC 60
Query: 73 CTENLMLCQDCDWDSHYNXXXXXXXXXXXXXGFSGCPSVTELASFF 118
EN+ LCQ C W + + +S CPS ++ +
Sbjct: 61 MNENVSLCQGCQWTA--SNCTGLGHRLQSLNPYSDCPSPSDFGKIW 104
Score = 168 (64.2 bits), Expect = 1.9e-40, Sum P(3) = 1.9e-40
Identities = 34/47 (72%), Positives = 37/47 (78%)
Query: 331 KNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASE 377
K R A RYK+KK R +GKQIRY SRKARADTRKRVKGRFVK+ E
Sbjct: 274 KLRDEAKKRYKQKKSKRMFGKQIRYASRKARADTRKRVKGRFVKSGE 320
Score = 54 (24.1 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 7 LSPGSSMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRH 54
LS + LC+ C+ + ++C ++ LC C Q ++N L H
Sbjct: 38 LSQRHTRSLLCEKCSLQPTAVHCMNENVSLCQGC--QWTASNCTGLGH 83
Score = 44 (20.5 bits), Expect = 1.9e-40, Sum P(3) = 1.9e-40
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 263 SNQPFSSHTPTTEESNNTPIIGPPSDYRPHEFETWE--STKVV 303
S F +T E + T ++ P SD E + W ST VV
Sbjct: 96 SPSDFGKIWSSTLEPSVTSLVSPFSDTLLQELDDWNGSSTSVV 138
>TAIR|locus:2091082 [details] [associations]
symbol:COL9 "CONSTANS-like 9" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0007623 GO:GO:0008270 GO:GO:0003700
EMBL:AC009176 eggNOG:NOG248444 HOGENOM:HOG000116529
ProtClustDB:CLSN2684850 EMBL:AY049290 IPI:IPI00522412
RefSeq:NP_001030659.1 RefSeq:NP_001118599.1 RefSeq:NP_187422.1
RefSeq:NP_974250.1 UniGene:At.18337 STRING:Q9SSE5 PRIDE:Q9SSE5
EnsemblPlants:AT3G07650.1 EnsemblPlants:AT3G07650.2
EnsemblPlants:AT3G07650.3 EnsemblPlants:AT3G07650.4 GeneID:819956
KEGG:ath:AT3G07650 TAIR:At3g07650 InParanoid:Q9SSE5 OMA:TSHIQTE
PhylomeDB:Q9SSE5 Genevestigator:Q9SSE5 GermOnline:AT3G07650
GO:GO:0048579 Uniprot:Q9SSE5
Length = 372
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 123/384 (32%), Positives = 174/384 (45%)
Query: 16 LCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRCCTE 75
+CDFC + +++YC +D+A LCL CD+ +HSANALS RH R+ +C+ C A+P +VRC E
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEE 63
Query: 76 NLMLCQDCDWDSHYNXXXXXXXXXXXX---------XGFSGCPSVTELASFFDLMGDDLL 126
+ LCQ+CDW H N +SGCPS +ELAS + D L
Sbjct: 64 RVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD--L 121
Query: 127 NLGSGFGVYEPKMLNFEELAVPTQNCSVFMSGNKYKKEVYEQLVEIGKRDLVRFNGNGAE 186
G E M+N ++ PT + N+ KK+V I + V + +
Sbjct: 122 -AGQSICEQELGMMNIDDDG-PTDKKTC----NEDKKDVLVGSSSIPETSSVPQGKSSSA 175
Query: 187 LGPGTTTSICDQYGYTQSLEVENIDE--EKLLNPKTAFT---SLLAFPNNTDL-REHDRC 240
G D YG EV+ E E+L TAF L L +H
Sbjct: 176 KDVGMCED--DFYGNLGMDEVDMALENYEELFG--TAFNPSEELFGHGGIDSLFHKHQTA 231
Query: 241 VADGKLMWDWDPSYPAAQFQNHSNQPFSSHTPTTEESNNTPIIGPPSDYRPHEFETWEST 300
G + P+ F + +P SN + G + +F+ ++
Sbjct: 232 PEGGNSV---QPAGSNDSFMSSKTEPIICFASKPAHSNIS-FSGVTGESSAGDFQECGAS 287
Query: 301 KVVQGMHHSILHGSETANEAITQFDKELLAKN--RGNAMLRYKEKKKNRSYGKQIRYESR 358
+Q L G Q D + + R NA++RYKEKKK R + K++RY SR
Sbjct: 288 SSIQ------LSGEPPWYPPTLQ-DNNACSHSVTRNNAVMRYKEKKKARKFDKRVRYASR 340
Query: 359 KARADTRKRVKGRFVKASEISDVE 382
KARAD R+RVKGRFVKA E D +
Sbjct: 341 KARADVRRRVKGRFVKAGEAYDYD 364
>TAIR|locus:2051104 [details] [associations]
symbol:BBX12 "B-box domain protein 12" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC002332 EMBL:BT002067 EMBL:AY128321
EMBL:BT006572 IPI:IPI00527026 IPI:IPI00539934 PIR:C84746
RefSeq:NP_850211.1 RefSeq:NP_973589.1 UniGene:At.43493
IntAct:O22800 STRING:O22800 EnsemblPlants:AT2G33500.1 GeneID:817915
KEGG:ath:AT2G33500 TAIR:At2g33500 eggNOG:NOG269245
HOGENOM:HOG000243233 InParanoid:O22800 OMA:ATHERSA PhylomeDB:O22800
ProtClustDB:CLSN2713949 Genevestigator:O22800 Uniprot:O22800
Length = 402
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 130/403 (32%), Positives = 189/403 (46%)
Query: 8 SPGSSMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEP 67
S S++A C+FC + AVL+C AD+AKLCL CDQ +HSAN LS +H+RSQICDNC EP
Sbjct: 4 STTESVVA-CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEP 62
Query: 68 VSVRCCTENLMLCQDCDWDSHYNXXXXXXXXXXXXXGFSGCPSVTELASFF--DLMG--- 122
VSVRC T+NL+LCQ+CDWD H + GFSGCPSV ELA+ + DL G
Sbjct: 63 VSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDLKGKKK 122
Query: 123 ----DDLL-NLGSGFGVYEPKMLNFEELAVPTQ-NCSV-FMSGNKYKKEVYEQLVEIGKR 175
D+L N G G + +EL VP +C S + K+ V+EQL E+ KR
Sbjct: 123 EDDEDELTKNFGMGLDSWGSGSNIVQELIVPYDVSCKKQSFSFGRSKQVVFEQL-ELLKR 181
Query: 176 DLVRFNGNGAELGPGTTTSICDQYGYTQSLEVENIDEEKLLNPKTAFTSLLAFP----NN 231
V G G + P G +I + +P T+FTSLL N
Sbjct: 182 GFVE--GEGEIMVPEGING-----G-------GSISQP---SPTTSFTSLLMSQSLCGNG 224
Query: 232 TDLREHDRCVADGKLMWDWD------PSYPAAQFQNHSNQPFSSHTPTTEESNNTPIIGP 285
+ +WD++ P P+ S F++ T ++ T +
Sbjct: 225 MQWNATNHSTGQNTQIWDFNLGQSRNPDEPSPVETKGSTFTFNNVTHLKNDTRTTNMNAF 284
Query: 286 PSDYRPHEFETWESTKVVQ-GMHHSI---LHGSETANEAITQFDKELLA--KNRGNAMLR 339
Y+ + STK + ++I +H +++N++ E +A NR ++
Sbjct: 285 KESYQQEDSVHSTSTKGQETSKSNNIPAAIHSHKSSNDSCGLHCTEHIAITSNRATRLVA 344
Query: 340 Y-----KEKKKNRSYGKQIRYESRKA--RADTRKRVKGRFVKA 375
++ +NR Q RY+ +K R D R + R +A
Sbjct: 345 VTNADLEQMAQNRDNAMQ-RYKEKKKTRRYDKTIRYETRKARA 386
Score = 213 (80.0 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 51/119 (42%), Positives = 68/119 (57%)
Query: 259 FQNHSNQPFSSHTPTTEESNNTPIIGPPSDYRPHEFETWESTKVVQGMHHSILHGSETAN 318
F+ Q S H+ +T+ + P+ H+ +S + H +I T
Sbjct: 284 FKESYQQEDSVHSTSTKGQETSKSNNIPAAIHSHKSSN-DSCGLHCTEHIAITSNRATRL 342
Query: 319 EAITQFDKELLAKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASE 377
A+T D E +A+NR NAM RYKEKKK R Y K IRYE+RKARA+TR RVKGRFVKA++
Sbjct: 343 VAVTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVKATD 401
>TAIR|locus:2088748 [details] [associations]
symbol:BBX10 "B-box domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AP000739 HOGENOM:HOG000116529 EMBL:AB493626 IPI:IPI00533145
RefSeq:NP_188826.1 UniGene:At.53422 EnsemblPlants:AT3G21880.1
GeneID:821743 KEGG:ath:AT3G21880 TAIR:At3g21880 eggNOG:NOG290178
InParanoid:Q9LJ44 OMA:KKTRTFG PhylomeDB:Q9LJ44
ProtClustDB:CLSN2685267 Genevestigator:Q9LJ44 Uniprot:Q9LJ44
Length = 364
Score = 240 (89.5 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 43/97 (44%), Positives = 57/97 (58%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRCCTEN 76
CD C + A++YC +D AKLCL CD +HSAN LS RH+RS IC+ C ++P ++RC E
Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRCLDEK 64
Query: 77 LMLCQDCDWDSHYNXXXXXXXXXXXXXGFSGCPSVTE 113
+ CQ C W H + FSGCPS T+
Sbjct: 65 VSYCQGCHW--HESNCSELGHRVQSLNPFSGCPSPTD 99
Score = 182 (69.1 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 37/50 (74%), Positives = 40/50 (80%)
Query: 333 RGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASEISDVE 382
R A LRYKEKK RS+GKQIRY SRKARADTRKRVKGRFVKA + D +
Sbjct: 307 RNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKAGDSYDYD 356
Score = 51 (23.0 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 16 LCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRH 54
+C+ C S+ A + C + C C H +N L H
Sbjct: 47 ICEKCFSQPAAIRCLDEKVSYCQGCHW--HESNCSELGH 83
>TAIR|locus:2047246 [details] [associations]
symbol:COL3 "CONSTANS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010099 "regulation of
photomorphogenesis" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0010218 "response to far red light" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC006585 EMBL:AC007266 GO:GO:0010161
GO:GO:0010099 HOGENOM:HOG000238833 EMBL:AY058130 EMBL:AY140103
EMBL:BT002107 EMBL:AY085729 IPI:IPI00519735 PIR:E84640
RefSeq:NP_180052.1 UniGene:At.24362 ProteinModelPortal:Q9SK53
IntAct:Q9SK53 STRING:Q9SK53 EnsemblPlants:AT2G24790.1 GeneID:817016
KEGG:ath:AT2G24790 TAIR:At2g24790 eggNOG:NOG277018
InParanoid:Q9SK53 OMA:TDSREND PhylomeDB:Q9SK53
ProtClustDB:CLSN2912944 Genevestigator:Q9SK53 Uniprot:Q9SK53
Length = 294
Score = 180 (68.4 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 35/78 (44%), Positives = 44/78 (56%)
Query: 11 SSMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSV 70
+S LCD C S A L+C AD+A LC CD +IH+AN L+ RH R +C+ C P V
Sbjct: 2 ASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHV 61
Query: 71 RCCTENLMLCQDCDWDSH 88
C + LC CD D H
Sbjct: 62 TCKADAAALCVTCDRDIH 79
Score = 133 (51.9 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 313 GSETANEAITQFDK-ELLAKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGR 371
G TA T+ +L R +LRY+EK+KNR + K IRY SRKA A+ R R+KGR
Sbjct: 208 GGVTAEMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGR 267
Query: 372 FVKASE 377
F K ++
Sbjct: 268 FAKRTD 273
Score = 119 (46.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 6 KLSPGSSMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQI 59
KL+ + LC+ C A + C AD+A LC+ CD+ IHSAN LS RH R I
Sbjct: 40 KLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPI 93
>TAIR|locus:2143221 [details] [associations]
symbol:COL1 "CONSTANS-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009909
EMBL:AL391144 EMBL:Y10555 EMBL:Y10556 EMBL:AY074369 EMBL:BT002363
IPI:IPI00520338 PIR:T51414 RefSeq:NP_197089.1 UniGene:At.24486
UniGene:At.48027 IntAct:O50055 STRING:O50055
EnsemblPlants:AT5G15850.1 GeneID:831442 KEGG:ath:AT5G15850
TAIR:At5g15850 eggNOG:NOG314154 HOGENOM:HOG000238833
InParanoid:O50055 OMA:QSCERAP PhylomeDB:O50055
ProtClustDB:CLSN2685199 Genevestigator:O50055 GermOnline:AT5G15850
Uniprot:O50055
Length = 355
Score = 182 (69.1 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 32/78 (41%), Positives = 43/78 (55%)
Query: 11 SSMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSV 70
S+ CD C S +YC ADSA LC CD Q+H+AN L+ RH R ++C +C P +
Sbjct: 6 SNWAQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAF 65
Query: 71 RCCTENLMLCQDCDWDSH 88
C + LC CD + H
Sbjct: 66 FCKADAASLCTTCDSEIH 83
Score = 132 (51.5 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 328 LLAKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASEISD 380
L ++R +LRY+EKKK R + K IRY SRKA A+ R R+KGRF K ++ +
Sbjct: 281 LSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDE 333
Score = 116 (45.9 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 6 KLSPGSSMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQI 59
+L+ + +C C A +C AD+A LC CD +IHSAN L+ RH R I
Sbjct: 44 RLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
>TAIR|locus:2074587 [details] [associations]
symbol:COL2 "CONSTANS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:AC021640
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
EMBL:AC068900 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009658 GO:GO:0009909 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:L81120 EMBL:L81119 EMBL:AF370149
EMBL:AY059092 EMBL:AY088779 IPI:IPI00518847 RefSeq:NP_186887.1
UniGene:At.10373 IntAct:Q96502 STRING:Q96502
EnsemblPlants:AT3G02380.1 GeneID:821298 KEGG:ath:AT3G02380
TAIR:At3g02380 eggNOG:NOG281690 InParanoid:Q96502 OMA:RVCEACE
PhylomeDB:Q96502 Genevestigator:Q96502 GermOnline:AT3G02380
Uniprot:Q96502
Length = 347
Score = 177 (67.4 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRCCTEN 76
CD C S +YC ADSA LC CD ++H+AN ++ RH R ++C +C + P + C +
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADA 75
Query: 77 LMLCQDCDWDSH 88
LC CD + H
Sbjct: 76 ASLCTACDAEIH 87
Score = 137 (53.3 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 29/56 (51%), Positives = 36/56 (64%)
Query: 322 TQFDKELLAKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASE 377
TQ ++L R +LRY+EKKK R + K IRY SRKA A+ R R+KGRF K E
Sbjct: 267 TQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIE 322
Score = 117 (46.2 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 28/71 (39%), Positives = 34/71 (47%)
Query: 16 LCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRCCTE 75
+C C S A C AD+A LC CD +IHSAN L+ RH R I P+S C+
Sbjct: 58 VCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPIL------PLSANSCSS 111
Query: 76 NLMLCQDCDWD 86
D D D
Sbjct: 112 MAPSETDADND 122
Score = 64 (27.6 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 57 SQICDNCRAEPVSVRCCTENLMLCQDCDWDSH 88
++ CD CR+ +V C ++ LC CD H
Sbjct: 13 ARACDTCRSAACTVYCEADSAYLCTTCDARVH 44
>TAIR|locus:2143206 [details] [associations]
symbol:CO "CONSTANS" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IGI] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010018 "far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009908 GO:GO:0009909 EMBL:AL391144 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:X94937 EMBL:BT001926 EMBL:AY086574
IPI:IPI00535908 IPI:IPI00657421 PIR:A56133 RefSeq:NP_001031887.1
RefSeq:NP_197088.1 UniGene:At.18 IntAct:Q39057 MINT:MINT-6608985
STRING:Q39057 EnsemblPlants:AT5G15840.1 GeneID:831441
KEGG:ath:AT5G15840 TAIR:At5g15840 eggNOG:NOG306777
InParanoid:Q39057 KO:K12135 OMA:CHADSAY PhylomeDB:Q39057
Genevestigator:Q39057 GO:GO:0010018 Uniprot:Q39057
Length = 373
Score = 191 (72.3 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 34/88 (38%), Positives = 51/88 (57%)
Query: 2 EDSFKLSPGSSMLAL-CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQIC 60
++S + G + A CD C S +YC ADSA LC+ CD Q+HSAN ++ RH R ++C
Sbjct: 4 QESNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVC 63
Query: 61 DNCRAEPVSVRCCTENLMLCQDCDWDSH 88
++C P + C ++ LC CD + H
Sbjct: 64 ESCERAPAAFLCEADDASLCTACDSEVH 91
Score = 122 (48.0 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 315 ETANEAITQFDKELLAKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVK 374
+ A++ IT +L +R +LRY+EK+K R + K IRY SRKA A+ R RV GRF K
Sbjct: 290 DPASQMITV--TQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAK 347
Score = 110 (43.8 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 16 LCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQI 59
+C+ C A C AD A LC CD ++HSAN L+ RH R I
Sbjct: 62 VCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105
>UNIPROTKB|Q9FDX8 [details] [associations]
symbol:HD1 "Zinc finger protein HD1" species:39947 "Oryza
sativa Japonica Group" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0045892 GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 EMBL:AP008212 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009908 GO:GO:0009909 GO:GO:0010229
eggNOG:NOG281690 OMA:RVCEACE GO:GO:0048579 GO:GO:0048576
EMBL:AB041837 EMBL:AB041838 EMBL:AB375859 EMBL:AP003044
EMBL:AP005813 RefSeq:NP_001057378.1 UniGene:Os.1189 STRING:Q9FDX8
EnsemblPlants:LOC_Os06g16370.1 GeneID:4340746 KEGG:osa:4340746
Gramene:Q9FDX8 ProtClustDB:CLSN2696123 GO:GO:0048571 GO:GO:0048572
Uniprot:Q9FDX8
Length = 395
Score = 170 (64.9 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRCCTEN 76
CD C + +V+YC AD+A LC CD ++H+AN ++ RH R ++C+ C P ++ C +
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACERAPAALACRADA 94
Query: 77 LMLCQDCDWDSH 88
LC CD H
Sbjct: 95 AALCVACDVQVH 106
Score = 138 (53.6 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 323 QFDKELLAKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASEISDVE 382
Q + +R +LRY+EKKK R + K IRYE+RKA A+ R R+KGRF K S++ +E
Sbjct: 316 QMSLHFSSMDREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSDVQ-IE 374
Query: 383 I 383
+
Sbjct: 375 V 375
Score = 100 (40.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 16 LCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANAL 50
+C+ C A L C AD+A LC+ CD Q+HSAN L
Sbjct: 77 VCEACERAPAALACRADAAALCVACDVQVHSANPL 111
>UNIPROTKB|Q9FE92 [details] [associations]
symbol:Hd1 "Heading day 1" species:4530 "Oryza sativa"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009909 GO:GO:0010229 GO:GO:0048571 GO:GO:0048572
EMBL:JN402207 EMBL:AB041840 EMBL:AB041842 Gramene:Q9FE92
Genevestigator:Q9FE92 Uniprot:Q9FE92
Length = 407
Score = 167 (63.8 bits), Expect = 6.5e-20, Sum P(2) = 6.5e-20
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRCCTEN 76
CD C + +V+YC AD+A LC CD ++H+AN ++ RH R ++C+ C P ++ C +
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACERAPAALACRADA 94
Query: 77 LMLCQDCD 84
LC CD
Sbjct: 95 AALCVACD 102
Score = 138 (53.6 bits), Expect = 6.5e-20, Sum P(2) = 6.5e-20
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 323 QFDKELLAKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASEISDVE 382
Q + +R +LRY+EKKK R + K IRYE+RKA A+ R R+KGRF K S++ +E
Sbjct: 328 QMSLHFSSMDREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSDVQ-IE 386
Query: 383 I 383
+
Sbjct: 387 V 387
Score = 109 (43.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 16 LCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLR 56
+C+ C A L C AD+A LC+ CD Q++SAN L+ RH R
Sbjct: 77 VCEACERAPAALACRADAAALCVACDVQVYSANPLARRHQR 117
Score = 69 (29.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 60 CDNCRAEPVSVRCCTENLMLCQDCDWDSH 88
CD CRA P V C + LC CD H
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVH 63
>TAIR|locus:2172545 [details] [associations]
symbol:COL5 "CONSTANS-like 5" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042631 "cellular response to water deprivation" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB018118 HOGENOM:HOG000238833 EMBL:AY057632
EMBL:AY080747 EMBL:AY114006 EMBL:AY088432 IPI:IPI00531436
RefSeq:NP_568863.1 UniGene:At.20797 IntAct:Q9FHH8 STRING:Q9FHH8
PRIDE:Q9FHH8 EnsemblPlants:AT5G57660.1 GeneID:835872
KEGG:ath:AT5G57660 TAIR:At5g57660 eggNOG:NOG321782
InParanoid:Q9FHH8 OMA:YSSYTAT PhylomeDB:Q9FHH8
ProtClustDB:CLSN2917767 Genevestigator:Q9FHH8 GermOnline:AT5G57660
Uniprot:Q9FHH8
Length = 355
Score = 156 (60.0 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 30/72 (41%), Positives = 38/72 (52%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRCCTEN 76
CD C S A ++C DSA LC+ CD +IHS RH R +C+ C P +V C +
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERVWVCEVCEQAPAAVTCKADA 77
Query: 77 LMLCQDCDWDSH 88
LC CD D H
Sbjct: 78 AALCVSCDADIH 89
Score = 147 (56.8 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 38/100 (38%), Positives = 56/100 (56%)
Query: 286 PSDYRPHEFETW--ESTKVVQGMHHSILHGSETANEAITQFDKELLAKNRGNAMLRYKEK 343
PS H T E V G ++ ++ S T + T D + + +R +LRY+EK
Sbjct: 237 PSQSVSHSVSTSSIEYGVVPDGNTNNSVNRS-TITSSTTGGDHQASSMDREARVLRYREK 295
Query: 344 KKNRSYGKQIRYESRKARADTRKRVKGRFVKASEISDVEI 383
+KNR + K IRY SRKA A++R R+KGRF K +E + +I
Sbjct: 296 RKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDDI 335
Score = 110 (43.8 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 16 LCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLR 56
+C+ C A + C AD+A LC+ CD IHSAN L+ RH R
Sbjct: 60 VCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHER 100
>TAIR|locus:2199262 [details] [associations]
symbol:BBX27 "B-box domain protein 27" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016447 EMBL:AK117800 IPI:IPI00522806
PIR:C96705 RefSeq:NP_176986.1 UniGene:At.35557
ProteinModelPortal:Q9C9F4 EnsemblPlants:AT1G68190.1 GeneID:843148
KEGG:ath:AT1G68190 TAIR:At1g68190 eggNOG:NOG293044
HOGENOM:HOG000111890 InParanoid:Q9C9F4 OMA:CIADTAN PhylomeDB:Q9C9F4
ProtClustDB:CLSN2717503 Genevestigator:Q9C9F4 GermOnline:AT1G68190
Uniprot:Q9C9F4
Length = 356
Score = 246 (91.7 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 97/363 (26%), Positives = 153/363 (42%)
Query: 12 SMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVR 71
+M +C+FC + AV+YC AD+A LCL CD ++HSAN+LS RHLR+ +CD+C+ +P VR
Sbjct: 9 NMERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVR 68
Query: 72 CCTENLMLCQDCDWDSHYNXXXXXXXXXXXXXGFSGCPSVTELASF--FDLMGDDL-LNL 128
C + LC C+ ++ ++GCP + A F +M DD ++L
Sbjct: 69 CFDHKMFLCHGCN--DKFHGGGSSEHRRRDLRCYTGCPPAKDFAVMWGFRVMDDDDDVSL 126
Query: 129 GSGFGVYEPKM-----------LNFEELAVPTQNCSVFMS--GN----KYKKEVYEQLVE 171
F + +PK+ L E++ + +N S ++ G+ + K+ EQL++
Sbjct: 127 EQSFRMVKPKVQREGGFILEQILELEKVQLREENGSSSLTERGDPSPLELPKKPEEQLID 186
Query: 172 I---GKRDLVRFNGNGAELGPGTTTSICDQ-YGYTQSLEVENIDEEKLLNPKTAFTSLLA 227
+ GK +V F+ + G + C Y L +NI + +
Sbjct: 187 LPQTGKELVVDFSHLSSSSTLGDSFWECKSPYNKNNQLWHQNIQDIGVCEDTICSDDDFQ 246
Query: 228 FPNNTDLREHDRCVADGKLMWDWDPSYPAAQFQNH---SNQPFSSHTPTTEESNNTPIIG 284
P D+ D + + + DP P A N S+ S T S N PI
Sbjct: 247 IP---DI---DLTFRNFEEQFGADPE-PIADSNNVFFVSSLDKSHEMKTFSSSFNNPIFA 299
Query: 285 PPSDYRPHEFETWESTKVVQGMHHSILHGSETANEAITQFDKELLAKNRGNAMLRYKEKK 344
P F + E+ HS E + F L R + R KEKK
Sbjct: 300 PKPASSTISFSSSETDNPYS---HS---------EEVISFCPSLSNNTRQKVITRLKEKK 347
Query: 345 KNR 347
+ R
Sbjct: 348 RAR 350
>TAIR|locus:2207155 [details] [associations]
symbol:AT1G05290 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002684 GO:GO:0003700 EMBL:DQ446230 IPI:IPI00535628
RefSeq:NP_172021.2 UniGene:At.51486 EnsemblPlants:AT1G05290.1
GeneID:837025 KEGG:ath:AT1G05290 TAIR:At1g05290 OMA:FEILQIF
PhylomeDB:Q1PFY3 ProtClustDB:CLSN2920218 ArrayExpress:Q1PFY3
Genevestigator:Q1PFY3 Uniprot:Q1PFY3
Length = 369
Score = 158 (60.7 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 331 KNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASEISDVE 382
K+R A RY EKKK R +GKQIRYESRK+ ADT+KR+KGRF KA D +
Sbjct: 305 KDREEAKKRYFEKKKKRKFGKQIRYESRKSTADTKKRMKGRFTKAGADYDYD 356
Score = 100 (40.3 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 34 AKLCLFCDQQIHSANALS-LRHLRSQICDNCRAEPVSVRCCTENLMLCQDC 83
A+LCL CD ++HS ++++ + R +C+NC ++ V + L LCQ C
Sbjct: 10 ARLCLQCDLKLHSKSSVNNYNYSRIPLCNNCVSQTALVESLEQGLCLCQSC 60
Score = 50 (22.7 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 18/80 (22%), Positives = 38/80 (47%)
Query: 249 DWDPSYPAAQ-FQNHSNQPFSSHTPTTEESNNTPIIGPPSDYRPHEFETWESTKVVQGMH 307
D S+ Q F++H+ +S T + + II P D F+++E+ + ++ +
Sbjct: 119 DSSSSFEILQIFEDHTKN-YSDQQVLTLQPDYLDII--PKDSSCSGFKSYETKEDIENVL 175
Query: 308 HSILHGSETANEAITQFDKE 327
+ G+E A + Q++ E
Sbjct: 176 MNTFDGAEAAVLDLKQYNPE 195
Score = 42 (19.8 bits), Expect = 9.0e-11, Sum P(3) = 9.0e-11
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 12 SMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALS--LRHLRSQICD 61
S + LC+ C S+ A++ LCL C + N +S L LR+ D
Sbjct: 32 SRIPLCNNCVSQTALVESLEQG--LCL-CQSCFSNPNVISRFLLLLRNDASD 80
>TAIR|locus:2028421 [details] [associations]
symbol:BBX17 "B-box domain protein 17" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 IPI:IPI00544498
RefSeq:NP_175339.2 UniGene:At.38297 EnsemblPlants:AT1G49130.1
GeneID:841336 KEGG:ath:AT1G49130 OMA:VATKHER Uniprot:F4I1N0
Length = 326
Score = 124 (48.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 325 DKELLAKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKAS 376
+++ + R + RY++K+KNR + K+IRYE RK AD R R+KGRFV+ S
Sbjct: 270 EEKRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 321
Score = 113 (44.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQIC 60
C+ C +K AV YC +D A LC CD+ +HSAN ++ +H R +C
Sbjct: 28 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHER--VC 69
Score = 45 (20.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 60 CDNCRAEPVSVRCCTENLMLCQDCDWDSH 88
C+ C + C +++ LC CD H
Sbjct: 28 CELCLNKHAVWYCASDDAFLCHVCDESVH 56
>TAIR|locus:2201277 [details] [associations]
symbol:BBX14 "B-box domain protein 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 HOGENOM:HOG000240360 ProtClustDB:CLSN2689085
EMBL:AC011915 EMBL:AY054625 EMBL:AY081541 EMBL:AY084427
IPI:IPI00518479 PIR:D96709 RefSeq:NP_564932.1 UniGene:At.23999
UniGene:At.69467 UniGene:At.74856 IntAct:Q8LG76 STRING:Q8LG76
PRIDE:Q8LG76 EnsemblPlants:AT1G68520.1 GeneID:843181
KEGG:ath:AT1G68520 TAIR:At1g68520 eggNOG:NOG257442
InParanoid:Q8LG76 OMA:AFLCHAC PhylomeDB:Q8LG76
Genevestigator:Q8LG76 GermOnline:AT1G68520 Uniprot:Q8LG76
Length = 406
Score = 121 (47.7 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 339 RYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASEI 378
RY+EK++ R + K+IRYE RK A+ R R+KGRFVK S I
Sbjct: 363 RYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRSSI 402
Score = 113 (44.8 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 24/59 (40%), Positives = 30/59 (50%)
Query: 1 MEDSFKLSPGSSMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQI 59
M S + G CD C + A YC AD A LC CD +HSAN L+ RH R ++
Sbjct: 1 MMKSLASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRL 59
Score = 55 (24.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 57 SQICDNCRAEPVSVRCCTENLMLCQDCDWDSH 88
++ CD+C C ++ LC CD H
Sbjct: 14 ARACDSCVKRRARWYCAADDAFLCHACDGSVH 45
>TAIR|locus:2031581 [details] [associations]
symbol:BBX16 "B-box domain protein 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0009641 "shade avoidance" evidence=IMP] [GO:0010223 "secondary
shoot formation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016662 HOGENOM:HOG000240360 EMBL:BT015740
EMBL:BT020183 IPI:IPI00516267 PIR:C96766 RefSeq:NP_177528.1
UniGene:At.34943 IntAct:Q9C9A9 STRING:Q9C9A9
EnsemblPlants:AT1G73870.1 GeneID:843723 KEGG:ath:AT1G73870
TAIR:At1g73870 eggNOG:NOG320376 InParanoid:Q9C9A9 OMA:EAKCENG
PhylomeDB:Q9C9A9 ProtClustDB:CLSN2914358 Genevestigator:Q9C9A9
GermOnline:AT1G73870 Uniprot:Q9C9A9
Length = 392
Score = 126 (49.4 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 337 MLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASEI 378
+LRYKEK++ R + K+IRYE RK A+ R R+KGRFVK + +
Sbjct: 349 VLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTSL 390
Score = 106 (42.4 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 25/52 (48%), Positives = 29/52 (55%)
Query: 10 GSSMLAL-CDFCNSKL-AVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQI 59
G M A CD C + A YC AD A LC CD IHSAN L+ RH R ++
Sbjct: 14 GEKMAARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65
Score = 55 (24.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 60 CDNC-RAEPVSVRCCTENLMLCQDCDWDSH 88
CD C + S C ++ LCQ CD H
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIH 51
>TAIR|locus:2031180 [details] [associations]
symbol:BBX15 "B-box domain protein 15" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281 GO:GO:0016020
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AY093174
IPI:IPI00533844 PIR:E86384 RefSeq:NP_173915.2 UniGene:At.27494
EnsemblPlants:AT1G25440.1 GeneID:839130 KEGG:ath:AT1G25440
TAIR:At1g25440 eggNOG:NOG293508 HOGENOM:HOG000240360
InParanoid:Q8RWD0 OMA:SDEISHE PhylomeDB:Q8RWD0
ProtClustDB:CLSN2689085 Genevestigator:Q8RWD0 Uniprot:Q8RWD0
Length = 417
Score = 117 (46.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 339 RYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASEIS 379
RY+EK++ R + K+IRYE RK A+ R R+KGRFVK + ++
Sbjct: 367 RYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASLA 407
Score = 114 (45.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 1 MEDSFKLSPGSSMLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQI 59
M S + G+ CD C + A YC AD A LC CD +HSAN L+ RH R ++
Sbjct: 1 MMKSLANAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59
Score = 65 (27.9 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 47 ANALSLRHLRSQICDNCRAEPVSVRCCTENLMLCQDCD 84
ANA+ + R+ CD+C C ++ LCQ CD
Sbjct: 6 ANAVGAKTARA--CDSCVKRRARWYCAADDAFLCQSCD 41
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 262 HSNQPFSSHTPTTEESNNTPIIGPPSDYR----PHEFETW 297
HS P + +P + S++ PHE TW
Sbjct: 45 HSANPLARRHERVRLKTASPAVVKHSNHSSASPPHEVATW 84
>TAIR|locus:2050130 [details] [associations]
symbol:BBX18 "B-box domain protein 18" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010264 "myo-inositol hexakisphosphate biosynthetic process"
evidence=RCA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008270
EMBL:AC006841 GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000239240
EMBL:AY060570 EMBL:AY125573 IPI:IPI00525924 PIR:H84599
RefSeq:NP_565507.1 UniGene:At.27367 ProteinModelPortal:Q9SJU5
SMR:Q9SJU5 STRING:Q9SJU5 EnsemblPlants:AT2G21320.1 GeneID:816671
KEGG:ath:AT2G21320 TAIR:At2g21320 eggNOG:NOG329451
InParanoid:Q9SJU5 OMA:KCNKLAS PhylomeDB:Q9SJU5
ProtClustDB:CLSN2914972 ArrayExpress:Q9SJU5 Genevestigator:Q9SJU5
Uniprot:Q9SJU5
Length = 172
Score = 158 (60.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 32/84 (38%), Positives = 41/84 (48%)
Query: 13 MLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQI--------CDNCR 64
M LCD C S A+++C AD A LC CD+++H N L+ RHLR + CD C
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60
Query: 65 AEPVSVRCCTENLMLCQDCDWDSH 88
P C + LC CD H
Sbjct: 61 NAPAFFYCEIDGSSLCLQCDMVVH 84
>UNIPROTKB|Q9FRZ6 [details] [associations]
symbol:Q9FRZ6 "Hd1" species:4530 "Oryza sativa" [GO:0003677
"DNA binding" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0010229 "inflorescence development" evidence=IGI]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] InterPro:IPR000315
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041841 Gramene:Q9FRZ6 Genevestigator:Q9FRZ6
Uniprot:Q9FRZ6
Length = 259
Score = 167 (63.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRCCTEN 76
CD C + +V+YC AD+A LC CD ++H+AN ++ RH R ++C+ C P ++ C +
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACERAPAALACRADA 94
Query: 77 LMLCQDCD 84
LC CD
Sbjct: 95 AALCVACD 102
>UNIPROTKB|Q9FRZ7 [details] [associations]
symbol:Hd1 "Hd1 protein" species:39946 "Oryza sativa Indica
Group" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041839 EMBL:AB564434 Gramene:Q9FRZ7
Uniprot:Q9FRZ7
Length = 342
Score = 170 (64.9 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRCCTEN 76
CD C + +V+YC AD+A LC CD ++H+AN ++ RH R ++C+ C P ++ C +
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACEQAPAALACRADA 94
Query: 77 LMLCQDCDWDSH 88
LC CD H
Sbjct: 95 AALCVACDVQVH 106
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 16 LCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLR 56
+C+ C A L C AD+A LC+ CD Q+HSAN L+ RH R
Sbjct: 77 VCEACEQAPAALACRADAAALCVACDVQVHSANPLARRHQR 117
>TAIR|locus:2195643 [details] [associations]
symbol:BBX26 "B-box domain protein 26" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 PROSITE:PS50119 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0008270 GO:GO:0003700 GO:GO:0005622
EMBL:AC004473 IPI:IPI00523867 PIR:T02277 RefSeq:NP_176231.1
UniGene:At.52283 ProteinModelPortal:O80748
EnsemblPlants:AT1G60250.1 GeneID:842320 KEGG:ath:AT1G60250
TAIR:At1g60250 eggNOG:NOG305480 HOGENOM:HOG000115139 OMA:FERSCHG
PhylomeDB:O80748 ProtClustDB:CLSN2913661 Genevestigator:O80748
Uniprot:O80748
Length = 251
Score = 158 (60.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 28/78 (35%), Positives = 41/78 (52%)
Query: 13 MLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRC 72
M +C C AV++C ++ CL CD H N + H+R Q+CDNC P + C
Sbjct: 1 MAQVCHTCRHVTAVIHCVTEALNFCLTCDNLRHHNN-IHAEHVRYQLCDNCSMYPSILFC 59
Query: 73 CTENLMLCQDCDWDSHYN 90
+ ++LCQ C + HYN
Sbjct: 60 YEDGMVLCQSC-YSHHYN 76
>TAIR|locus:2005624 [details] [associations]
symbol:BBX21 "B-box domain protein 21" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009641 "shade avoidance"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 GO:GO:0009641 HOGENOM:HOG000239240 EMBL:AC006434
EMBL:AB493536 IPI:IPI00536705 PIR:G96785 RefSeq:NP_177686.1
UniGene:At.34761 UniGene:At.69592 ProteinModelPortal:Q9LQZ7
SMR:Q9LQZ7 IntAct:Q9LQZ7 STRING:Q9LQZ7 EnsemblPlants:AT1G75540.1
GeneID:843890 KEGG:ath:AT1G75540 TAIR:At1g75540 eggNOG:NOG315170
InParanoid:Q9LQZ7 OMA:CDICQDK PhylomeDB:Q9LQZ7
ProtClustDB:CLSN2682536 Genevestigator:Q9LQZ7 GermOnline:AT1G75540
Uniprot:Q9LQZ7
Length = 331
Score = 158 (60.7 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 32/84 (38%), Positives = 46/84 (54%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLR------------SQICDNCR 64
CD C+ + A ++CTAD A LC CD Q+H AN L+ +HLR S +CD C+
Sbjct: 5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQ 64
Query: 65 AEPVSVRCCTENLMLCQDCDWDSH 88
+ + C + +LC+DCD H
Sbjct: 65 DKKALLFCQQDRAILCKDCDSSIH 88
Score = 39 (18.8 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 230 NNTDLREHDRCVADGKLMWDWDPSYPAAQFQNHSNQPFS 268
NN + ++ K + W P P ++ NQ FS
Sbjct: 230 NNNNNNNNNTVSLPSKNLGIWVPQIPQTLPSSYPNQYFS 268
>TAIR|locus:1009023318 [details] [associations]
symbol:BBX30 "B-box domain protein 30" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270
GO:GO:0005622 EMBL:DQ487602 IPI:IPI00657516 RefSeq:NP_001031645.1
UniGene:At.63271 EnsemblPlants:AT4G15248.1 GeneID:3769879
KEGG:ath:AT4G15248 TAIR:At4g15248 OMA:ELCGENA PhylomeDB:Q1G3I2
Genevestigator:Q2V3I2 Uniprot:Q1G3I2
Length = 117
Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRC 72
C+ C A +YC AD+A LC CD+ +HSAN L+ RHLR IC CR ++ RC
Sbjct: 32 CELCGEN-ATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRK--LTRRC 84
>TAIR|locus:2061330 [details] [associations]
symbol:STH "salt tolerance homologue" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0019904 "protein domain specific binding"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0010224 "response to UV-B"
evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC007169 HOGENOM:HOG000239240 UniGene:At.24192
UniGene:At.69838 EMBL:AF323666 EMBL:AF325077 EMBL:AF370311
EMBL:AY063097 IPI:IPI00545007 PIR:A84720 RefSeq:NP_565722.1
ProteinModelPortal:Q9SID1 SMR:Q9SID1 IntAct:Q9SID1 STRING:Q9SID1
EnsemblPlants:AT2G31380.1 GeneID:817696 KEGG:ath:AT2G31380
TAIR:At2g31380 eggNOG:NOG279894 InParanoid:Q9SID1 OMA:CAKCDVE
PhylomeDB:Q9SID1 ProtClustDB:CLSN2682276 Genevestigator:Q9SID1
GermOnline:AT2G31380 Uniprot:Q9SID1
Length = 238
Score = 145 (56.1 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQI---------CDNCRAEP 67
CD C A L C AD A LC CD ++H+AN L+ +H R + CD C +
Sbjct: 5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKA 64
Query: 68 VSVRCCTENLMLCQDCDWDSH 88
+ C + +LC+DCD +H
Sbjct: 65 AFIFCVEDRALLCRDCDEATH 85
>TAIR|locus:2198841 [details] [associations]
symbol:STO "SALT TOLERANCE" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009640 "photomorphogenesis" evidence=IGI]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009651
"response to salt stress" evidence=IGI;RCA] [GO:0009737 "response
to abscisic acid stimulus" evidence=RCA] [GO:0046686 "response to
cadmium ion" evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0080167 GO:GO:0009640 EMBL:AC024174 HOGENOM:HOG000239240
ProtClustDB:CLSN2682276 EMBL:X95572 EMBL:AY079377 EMBL:AY045794
IPI:IPI00518701 PIR:E86195 RefSeq:NP_172094.1 UniGene:At.23289
UniGene:At.38035 UniGene:At.70752 ProteinModelPortal:Q96288
SMR:Q96288 IntAct:Q96288 MINT:MINT-189223 STRING:Q96288
EnsemblPlants:AT1G06040.1 GeneID:837113 KEGG:ath:AT1G06040
TAIR:At1g06040 eggNOG:NOG313367 InParanoid:Q96288 OMA:PRCDICQ
PhylomeDB:Q96288 Genevestigator:Q96288 Uniprot:Q96288
Length = 248
Score = 145 (56.1 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQI---------CDNCRAEP 67
CD C A + C AD A LC CD +IH+AN L+ +H R + CD C+ +
Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKA 64
Query: 68 VSVRCCTENLMLCQDCDWDSH 88
+ C + +LC+DCD H
Sbjct: 65 AFIFCVEDRALLCRDCDESIH 85
>TAIR|locus:2095562 [details] [associations]
symbol:BBX31 "B-box domain protein 31" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010224 "response to UV-B" evidence=IEP;RCA] [GO:0009744
"response to sucrose stimulus" evidence=RCA] InterPro:IPR000315
Pfam:PF00643 SMART:SM00336 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 GO:GO:0010224
EMBL:AB028622 EMBL:AY086564 EMBL:AB493627 IPI:IPI00531471
RefSeq:NP_188827.1 UniGene:At.37979 ProteinModelPortal:Q9LRM4
EnsemblPlants:AT3G21890.1 GeneID:821744 KEGG:ath:AT3G21890
TAIR:At3g21890 eggNOG:NOG259331 HOGENOM:HOG000090727
InParanoid:Q9LRM4 OMA:CEADSAF PhylomeDB:Q9LRM4
ProtClustDB:CLSN2685268 Genevestigator:Q9LRM4 Uniprot:Q9LRM4
Length = 121
Score = 124 (48.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAEPVSVRC 72
C+ C+ +V +C ADSA LC CD+ +H AN L+ RH+R +C +C + ++ RC
Sbjct: 31 CELCDGDASV-FCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSC--QKLTRRC 83
>TAIR|locus:2092940 [details] [associations]
symbol:BBX32 "B-box domain protein 32" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009640 "photomorphogenesis" evidence=IMP] [GO:0009785 "blue
light signaling pathway" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0009909 "regulation of
flower development" evidence=IMP] GO:GO:0005634 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003700 EMBL:AP000604
GO:GO:0009640 GO:GO:0010200 GO:GO:0009909 EMBL:BT005244
EMBL:AK117844 IPI:IPI00537563 RefSeq:NP_188752.1 UniGene:At.38107
IntAct:Q9LJB7 EnsemblPlants:AT3G21150.1 GeneID:821667
KEGG:ath:AT3G21150 TAIR:At3g21150 eggNOG:NOG279642
HOGENOM:HOG000090878 InParanoid:Q9LJB7 OMA:IISAVEM PhylomeDB:Q9LJB7
ProtClustDB:CLSN2915650 Genevestigator:Q9LJB7 Uniprot:Q9LJB7
Length = 225
Score = 135 (52.6 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 13 MLALCDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRA 65
M++ C+ C ++ A L+C ADSA LC CD + H++N L RH R IC NC++
Sbjct: 1 MVSFCELCGAE-ADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKS 52
>TAIR|locus:2007482 [details] [associations]
symbol:AT1G07050 "AT1G07050" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007623 "circadian rhythm" evidence=RCA]
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AY085907 EMBL:AK176556 EMBL:AB493438
IPI:IPI00532995 RefSeq:NP_563778.1 UniGene:At.42316 STRING:Q8LDM8
EnsemblPlants:AT1G07050.1 GeneID:837216 KEGG:ath:AT1G07050
TAIR:At1g07050 eggNOG:NOG283732 HOGENOM:HOG000090331
InParanoid:Q8LDM8 OMA:NMRREAS PhylomeDB:Q8LDM8
ProtClustDB:CLSN2687713 ArrayExpress:Q8LDM8 Genevestigator:Q8LDM8
Uniprot:Q8LDM8
Length = 195
Score = 124 (48.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 35/97 (36%), Positives = 51/97 (52%)
Query: 278 NNTPIIGPPSDYRPHEFETWESTKVVQGMHHSILHGSETANEAITQFDKELLAKNRGNAM 337
N+ +I SD H+ W T + +S+ G E +K + R ++
Sbjct: 109 NHQEVIDAWSD---HQKPLWTDTSTLD---NSVYRGEVPVIE-----EKRNM--RREASV 155
Query: 338 LRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVK 374
LRYKEK+++R + K+IRY+ RK AD R R KGRFVK
Sbjct: 156 LRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVK 192
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 129 GSGFGVYEPKMLNFEE 144
GS FG +E K ++E+
Sbjct: 84 GSSFGFWENKPTDYED 99
>TAIR|locus:2145698 [details] [associations]
symbol:AT5G14370 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002688 EMBL:AY050892 EMBL:AY091296
IPI:IPI00522642 RefSeq:NP_568300.1 UniGene:At.5173
EnsemblPlants:AT5G14370.1 GeneID:831288 KEGG:ath:AT5G14370
TAIR:At5g14370 HOGENOM:HOG000151170 InParanoid:Q949T9 OMA:WVSYSEV
PhylomeDB:Q949T9 ProtClustDB:CLSN2689669 ArrayExpress:Q949T9
Genevestigator:Q949T9 Uniprot:Q949T9
Length = 339
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/86 (39%), Positives = 50/86 (58%)
Query: 298 ESTKVVQGMHHS---ILHGSETANE-AITQFD--KELLAKNRGNAMLRYKEKKKNRSYGK 351
E + V +H S G E N A+ + + + L +R ++LRYKEK++NR + K
Sbjct: 253 EPPQTVPDLHASADGFNDGGEAGNLWAVPEMETTERLWRGHREASLLRYKEKRQNRLFSK 312
Query: 352 QIRYESRKARADTRKRVKGRFVKASE 377
+IRY+ RK A+ R RVKGRFVK +
Sbjct: 313 RIRYQVRKLNAEKRPRVKGRFVKRED 338
>TAIR|locus:2120207 [details] [associations]
symbol:BZS1 "BZS1" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IEP]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0080167
GO:GO:0010200 EMBL:AL035679 EMBL:AL161594 EMBL:AK118879
EMBL:BT028893 IPI:IPI00535007 PIR:T06067 RefSeq:NP_195618.2
UniGene:At.31120 ProteinModelPortal:Q0IGM7 SMR:Q0IGM7 PRIDE:Q0IGM7
EnsemblPlants:AT4G39070.1 GeneID:830062 KEGG:ath:AT4G39070
TAIR:At4g39070 eggNOG:NOG257043 HOGENOM:HOG000239240
InParanoid:Q0IGM7 OMA:DICGERR PhylomeDB:Q0IGM7
ProtClustDB:CLSN2915067 Genevestigator:Q0IGM7 GO:GO:0009741
Uniprot:Q0IGM7
Length = 242
Score = 129 (50.5 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLR----------SQICDNCRAE 66
C C+ + A ++C AD A LC CD+ +H AN L+ +HLR + +CD C
Sbjct: 5 CAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDICGER 64
Query: 67 PVSVRCCTENLMLCQDCDWDSH 88
+ C + +LC++CD H
Sbjct: 65 RALLFCQEDRAILCRECDIPIH 86
>TAIR|locus:2131709 [details] [associations]
symbol:BBX28 "B-box domain protein 28" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 Pfam:PF00643 SMART:SM00336 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161566 GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AL030978 IPI:IPI00524555 PIR:T05755
RefSeq:NP_194461.1 UniGene:At.28344 EnsemblPlants:AT4G27310.1
GeneID:828839 KEGG:ath:AT4G27310 TAIR:At4g27310 eggNOG:NOG263097
HOGENOM:HOG000115162 InParanoid:O81834 OMA:SAFKSTV PhylomeDB:O81834
ProtClustDB:CLSN2916189 Genevestigator:O81834 Uniprot:O81834
Length = 223
Score = 124 (48.7 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRA 65
CD CN +A +YC +D A LC CD ++H AN L +H R +C C++
Sbjct: 5 CDLCNG-VARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQS 52
Score = 37 (18.1 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 297 WESTKVVQGMHHSILHGSETANEAITQFDKELLAKNRGNAMLRYKEKKKNR 347
W++T + G S+ A +L++NRG + E +++R
Sbjct: 56 WKATGLRLGPTFSVCESCVALKNAGGGRGNRVLSENRGQEEVNSFESEEDR 106
>TAIR|locus:2175564 [details] [associations]
symbol:CIA2 "chloroplast import apparatus 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEP] [GO:0045036 "protein targeting to chloroplast"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR010402
Pfam:PF06203 PROSITE:PS51017 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 EMBL:AB023042 EMBL:AF359387
EMBL:AF372929 EMBL:AY078036 EMBL:AK316813 EMBL:AK221521
IPI:IPI00517190 IPI:IPI00544089 IPI:IPI00656805
RefSeq:NP_001032087.1 RefSeq:NP_568852.2 RefSeq:NP_851201.1
UniGene:At.9681 IntAct:Q9LU68 STRING:Q9LU68 PaxDb:Q9LU68
PRIDE:Q9LU68 EnsemblPlants:AT5G57180.2 GeneID:835824
KEGG:ath:AT5G57180 GeneFarm:2245 TAIR:At5g57180 eggNOG:NOG245310
HOGENOM:HOG000238782 InParanoid:Q9LU68 OMA:YLRSLMV PhylomeDB:Q9LU68
ProtClustDB:CLSN2680548 Genevestigator:Q9LU68 GO:GO:0045036
Uniprot:Q9LU68
Length = 435
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 311 LHGSETA--NEAITQFDKELLAKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRV 368
+ GSE N + Q D + R ++LRYKEK++ R + K+IRY+ RK AD R R+
Sbjct: 359 IQGSEAVDVNARLAQIDLFGDSGMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRM 418
Query: 369 KGRFVK 374
KGRFV+
Sbjct: 419 KGRFVR 424
>TAIR|locus:2122759 [details] [associations]
symbol:bbx23 "B-box domain protein 23" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AF096373 EMBL:AL161516 HOGENOM:HOG000239240
EMBL:AL049488 EMBL:AY122916 IPI:IPI00525768 PIR:T01973
RefSeq:NP_192762.1 UniGene:At.33641 ProteinModelPortal:O82617
SMR:O82617 EnsemblPlants:AT4G10240.1 GeneID:826615
KEGG:ath:AT4G10240 TAIR:At4g10240 eggNOG:NOG273282
InParanoid:O82617 OMA:TENSECS PhylomeDB:O82617
ProtClustDB:CLSN2915973 Genevestigator:O82617 Uniprot:O82617
Length = 162
Score = 113 (44.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 28/87 (32%), Positives = 37/87 (42%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLR---------------SQICD 61
C+ C A + C +D A LC CD ++H AN L RH R + +CD
Sbjct: 5 CEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGAPLCD 64
Query: 62 NCRAEPVSVRCCTENLMLCQDCDWDSH 88
C+ C + MLC DCD H
Sbjct: 65 ICQERKGYFFCLEDRAMLCNDCDEAIH 91
>TAIR|locus:2132902 [details] [associations]
symbol:AT4G27900 "AT4G27900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002687 EMBL:AL161572 EMBL:AL035524 EMBL:AY062469
EMBL:AY093297 IPI:IPI00527124 PIR:T02891 RefSeq:NP_194519.1
RefSeq:NP_849461.1 UniGene:At.26998 IntAct:Q9SUE8 PRIDE:Q9SUE8
EnsemblPlants:AT4G27900.1 EnsemblPlants:AT4G27900.2 GeneID:828903
KEGG:ath:AT4G27900 TAIR:At4g27900 HOGENOM:HOG000241629
InParanoid:Q9SUE8 OMA:ISCTSED PhylomeDB:Q9SUE8
ProtClustDB:CLSN2685530 Genevestigator:Q9SUE8 Uniprot:Q9SUE8
Length = 261
Score = 122 (48.0 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 24/68 (35%), Positives = 44/68 (64%)
Query: 316 TANEAI--TQFDKELLA---KNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKG 370
T N + +Q D+ +++ ++R + RY+ KK R++G++I+Y RKA AD++ R++G
Sbjct: 192 TGNTGLVQSQLDRIIISCTSEDRREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRG 251
Query: 371 RFVKASEI 378
RF K E+
Sbjct: 252 RFAKTEEM 259
>TAIR|locus:2178441 [details] [associations]
symbol:AT5G53420 "AT5G53420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 EMBL:AY099753 EMBL:BT000280 IPI:IPI00547333
RefSeq:NP_568793.1 UniGene:At.8948 PRIDE:Q8L602
EnsemblPlants:AT5G53420.1 GeneID:835423 KEGG:ath:AT5G53420
TAIR:At5g53420 InParanoid:Q8L602 OMA:TINENQD PhylomeDB:Q8L602
ProtClustDB:CLSN2690008 ArrayExpress:Q8L602 Genevestigator:Q8L602
Uniprot:Q8L602
Length = 264
Score = 122 (48.0 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 330 AKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASE 377
+++R + RYK KK R++G++I+Y RKA AD++ RV+GRF K E
Sbjct: 215 SEDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 262
>TAIR|locus:2147274 [details] [associations]
symbol:BBX29 "B-box domain protein 29" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR000315 SMART:SM00336
EMBL:CP002688 GO:GO:0009555 GO:GO:0009409 GO:GO:0008270
GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000115162
ProtClustDB:CLSN2916189 EMBL:BT012358 EMBL:AK221519 IPI:IPI00528573
RefSeq:NP_200258.2 UniGene:At.43303 STRING:Q6NLH4
EnsemblPlants:AT5G54470.1 GeneID:835535 KEGG:ath:AT5G54470
TAIR:At5g54470 eggNOG:NOG303512 InParanoid:Q6NLH4 OMA:CESCLAR
Genevestigator:Q6NLH4 Uniprot:Q6NLH4
Length = 215
Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 17 CDFCNSKLAVLYCTADSAKLCLFCDQQIHSANALSLRHLRSQICDNCRAE-P--VSVRCC 73
C+ C +A +YC +D A LC CD ++H AN L +H+R +C C++ P S
Sbjct: 6 CELCCG-VARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLNL 64
Query: 74 TENLMLCQDC 83
+ +C+ C
Sbjct: 65 GPTVSICESC 74
>TAIR|locus:2168083 [details] [associations]
symbol:AT5G59990 "AT5G59990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB015475 EMBL:AY924872
IPI:IPI00537727 RefSeq:NP_200807.1 UniGene:At.55631
EnsemblPlants:AT5G59990.1 GeneID:836121 KEGG:ath:AT5G59990
TAIR:At5g59990 HOGENOM:HOG000064609 InParanoid:Q9FJD8 OMA:RESSTVW
PhylomeDB:Q9FJD8 ProtClustDB:CLSN2686501 ArrayExpress:Q9FJD8
Genevestigator:Q9FJD8 Uniprot:Q9FJD8
Length = 241
Score = 114 (45.2 bits), Expect = 0.00034, P = 0.00034
Identities = 30/98 (30%), Positives = 46/98 (46%)
Query: 286 PSDYRPHEFETW-ESTKVVQGMHHSILHGSETANEAITQFDKELLAKNRGNAMLRYKEKK 344
P R W ES +++GM + + E E I +Y+ K+
Sbjct: 131 PRSSRRESSTVWSESNAIIEGMSKAYKYSPEEKKEKIE----------------KYRSKR 174
Query: 345 KNRSYGKQIRYESRKARADTRKRVKGRFVKASEISDVE 382
R++ K+I+YE RK AD+R R++GRF + EIS E
Sbjct: 175 NLRNFNKRIKYECRKTLADSRPRIRGRFARNDEISQQE 212
>TAIR|locus:2018344 [details] [associations]
symbol:AT1G04500 "AT1G04500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:DQ446226 EMBL:AB493431
IPI:IPI00533670 RefSeq:NP_171944.2 UniGene:At.42446
EnsemblPlants:AT1G04500.1 GeneID:839510 KEGG:ath:AT1G04500
TAIR:At1g04500 HOGENOM:HOG000239716 InParanoid:Q1PFY7 OMA:SPSCSFL
PhylomeDB:Q1PFY7 ProtClustDB:CLSN2680683 Genevestigator:Q1PFY7
Uniprot:Q1PFY7
Length = 386
Score = 117 (46.2 bits), Expect = 0.00042, P = 0.00042
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 313 GSETANEAITQFDK--ELLAKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKG 370
G+E F+K +L A+ R + RY +K+ R++ K+I+Y RK AD+R RV+G
Sbjct: 266 GTEITGLDDPSFNKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRG 325
Query: 371 RFVKASEISD 380
RF K E +
Sbjct: 326 RFAKNDEFGE 335
>TAIR|locus:2062749 [details] [associations]
symbol:AT2G46670 "AT2G46670" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002685 GenomeReviews:CT485783_GR UniGene:At.65052
EMBL:AB493594 IPI:IPI00540845 RefSeq:NP_182190.2
EnsemblPlants:AT2G46670.1 GeneID:819279 KEGG:ath:AT2G46670
TAIR:At2g46670 PhylomeDB:C0SV91 Genevestigator:Q3EBF0
Uniprot:C0SV91
Length = 183
Score = 109 (43.4 bits), Expect = 0.00048, P = 0.00048
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 313 GSETANEAI------TQFDKEL-LAKNRGN------AMLRYKEKKKNRSYGKQIRYESRK 359
GS++ NE I T+ KE AK R + A+++++ K+K+R + K++RY+SRK
Sbjct: 99 GSQSTNEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRK 158
Query: 360 ARADTRKRVKGRFVK 374
A+ R RVKG+FV+
Sbjct: 159 KLAEQRPRVKGQFVR 173
>TAIR|locus:2177911 [details] [associations]
symbol:AT5G41380 "AT5G41380" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AY800647 EMBL:AY924846
IPI:IPI00519705 RefSeq:NP_198954.2 UniGene:At.51252
EnsemblPlants:AT5G41380.1 GeneID:834140 KEGG:ath:AT5G41380
TAIR:At5g41380 HOGENOM:HOG000090374 InParanoid:Q5Q0A4 OMA:VVEIPNI
PhylomeDB:Q5Q0A4 ProtClustDB:CLSN2681537 Genevestigator:Q5Q0A4
Uniprot:Q5Q0A4
Length = 307
Score = 106 (42.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 330 AKNRGNAMLRYKEKKKNRSYGKQIRYESRKARADTRKRVKGRFVKASEISDV 381
A+ R + +Y+ K+ R++ K I+Y RK AD+R R++GRF + E+ ++
Sbjct: 212 AEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFARNDEVVEI 263
Score = 46 (21.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 247 MWDWDPSYPAAQFQNHSNQPFSSHTPTTEE 276
++D S ++ F+N S FSS T TT +
Sbjct: 9 IFDGSSSSSSSVFRNSSPDMFSSDTTTTTD 38
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 383 370 0.00086 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 616 (65 KB)
Total size of DFA: 278 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.68u 0.08s 32.76t Elapsed: 00:00:02
Total cpu time: 32.68u 0.08s 32.76t Elapsed: 00:00:03
Start: Thu May 9 16:01:05 2013 End: Thu May 9 16:01:08 2013