Query 016776
Match_columns 383
No_of_seqs 256 out of 1723
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 03:36:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016776.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016776hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 2.9E-84 9.8E-89 635.3 29.6 331 28-367 6-350 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 8E-78 2.7E-82 581.1 22.7 295 60-373 3-305 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 4E-76 1.4E-80 568.4 24.7 294 59-360 5-307 (312)
4 1odm_A Isopenicillin N synthas 100.0 5.7E-73 1.9E-77 550.5 24.2 289 59-362 7-324 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 6.2E-72 2.1E-76 538.6 18.3 271 59-357 3-300 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 1.1E-66 3.8E-71 494.8 22.3 257 59-359 2-274 (280)
7 3dkq_A PKHD-type hydroxylase S 95.3 0.038 1.3E-06 50.3 7.2 100 206-323 78-194 (243)
8 2rg4_A Uncharacterized protein 93.9 0.65 2.2E-05 41.2 11.9 43 272-326 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 87.5 0.99 3.4E-05 40.9 6.5 80 228-323 118-212 (247)
10 2jig_A Prolyl-4 hydroxylase; h 87.0 0.79 2.7E-05 40.7 5.4 87 228-324 99-217 (224)
11 3itq_A Prolyl 4-hydroxylase, a 85.3 1 3.5E-05 40.0 5.2 102 203-323 95-211 (216)
12 2iuw_A Alkylated repair protei 77.0 7.6 0.00026 34.7 8.0 85 227-323 126-229 (238)
13 3s57_A Alpha-ketoglutarate-dep 74.6 7.4 0.00025 33.9 7.1 81 227-321 100-200 (204)
14 3i3q_A Alpha-ketoglutarate-dep 65.5 30 0.001 30.2 9.0 80 227-322 105-201 (211)
15 3tht_A Alkylated DNA repair pr 48.7 19 0.00064 34.1 4.9 105 226-339 197-327 (345)
16 2dbn_A Hypothetical protein YB 42.9 6.9 0.00024 38.5 0.9 53 59-118 99-151 (461)
17 1e5r_A Proline oxidase; oxidor 42.3 23 0.00078 32.7 4.3 63 245-322 103-175 (290)
18 2opw_A Phyhd1 protein; double- 41.9 54 0.0018 29.5 6.9 35 83-118 7-41 (291)
19 4ay7_A Methylcobalamin\: coenz 41.4 60 0.0021 30.2 7.3 47 69-118 298-348 (348)
20 3o2g_A Gamma-butyrobetaine dio 39.5 11 0.00036 36.3 1.7 52 60-119 122-173 (388)
21 3rcq_A Aspartyl/asparaginyl be 39.2 47 0.0016 28.7 5.6 43 284-326 139-186 (197)
22 1m5a_B Insulin B chain; alpha 39.1 30 0.001 20.4 2.9 17 79-95 10-26 (30)
23 2opi_A L-fuculose-1-phosphate 34.7 23 0.00079 30.7 3.0 36 60-101 125-160 (212)
24 2da7_A Zinc finger homeobox pr 32.4 18 0.00061 26.0 1.4 40 184-223 15-54 (71)
25 1otj_A Alpha-ketoglutarate-dep 32.1 38 0.0013 30.5 4.1 51 58-117 15-65 (283)
26 1e4c_P L-fuculose 1-phosphate 30.5 30 0.001 30.1 3.0 36 60-101 122-157 (215)
27 1zav_A 50S ribosomal protein L 29.6 1.1E+02 0.0037 25.8 6.3 42 75-116 6-48 (180)
28 1pvt_A Sugar-phosphate aldolas 28.7 38 0.0013 29.9 3.4 36 60-101 161-196 (238)
29 2j01_J 50S ribosomal protein L 28.7 1.1E+02 0.0037 25.6 6.1 40 76-115 5-46 (173)
30 1otf_A 4-oxalocrotonate tautom 27.4 40 0.0014 22.3 2.6 29 62-90 1-29 (62)
31 2fk5_A Fuculose-1-phosphate al 27.4 40 0.0014 29.0 3.2 36 60-101 117-153 (200)
32 1oih_A Putative alkylsulfatase 25.9 56 0.0019 29.7 4.1 52 58-118 25-77 (301)
33 2opa_A Probable tautomerase YW 25.9 45 0.0015 22.0 2.6 29 62-90 1-29 (61)
34 3kt7_A PKHD-type hydroxylase T 24.7 84 0.0029 32.0 5.3 82 229-326 126-231 (633)
35 3jsy_A Acidic ribosomal protei 24.7 1E+02 0.0035 26.8 5.4 41 75-115 3-44 (213)
36 3m20_A 4-oxalocrotonate tautom 23.9 75 0.0026 21.3 3.5 28 62-90 1-28 (62)
37 2x4k_A 4-oxalocrotonate tautom 23.6 61 0.0021 21.3 3.0 21 197-217 20-40 (63)
38 2irp_A Putative aldolase class 22.7 32 0.0011 29.6 1.7 35 60-101 139-176 (208)
39 3abf_A 4-oxalocrotonate tautom 22.5 58 0.002 21.7 2.7 21 197-217 18-38 (64)
40 2v9l_A Rhamnulose-1-phosphate 22.0 47 0.0016 30.1 2.7 36 60-101 179-214 (274)
41 3ry0_A Putative tautomerase; o 21.6 60 0.0021 22.0 2.6 29 62-90 1-29 (65)
42 2z7b_A MLR6791 protein; class 21.6 66 0.0023 29.0 3.6 38 60-101 157-201 (270)
43 2vf9_A Coat protein; virion, R 20.3 24 0.00081 26.6 0.2 17 292-308 49-65 (131)
44 3r1j_A Alpha-ketoglutarate-dep 20.1 93 0.0032 28.5 4.3 53 58-119 19-72 (301)
45 2ww6_A Fibritin, T4 fibritin; 20.0 60 0.002 18.5 1.8 13 266-278 12-24 (27)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.9e-84 Score=635.25 Aligned_cols=331 Identities=29% Similarity=0.481 Sum_probs=297.8
Q ss_pred chhHhhhccCCCCCCCCCCCCCCCCCCCC----C----CCCcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEecc
Q 016776 28 VFDASVLKHQTQIPKQFIWPDDEKPCVNA----P----ELQVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNH 99 (383)
Q Consensus 28 ~v~~~~~~~~~~vP~~yi~p~~~~~~~~~----~----~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nH 99 (383)
.||+|+++|+++||++||+|+++++.... . ..+||||||+.|.++++..|++++++|.+||++||||||+||
T Consensus 6 ~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nH 85 (356)
T 1gp6_A 6 RVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINH 85 (356)
T ss_dssp CHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESC
T ss_pred cHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCC
Confidence 48999999999999999999888875322 1 236999999999877887889999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCHHHHHHhhccCC--CccccCCCCCCcccCCCCceeceecccccccccCchhhhhhhccc
Q 016776 100 GVDSSLIADAHRYMDHFFELPLNEKQRARRKLG--EHCGYASSFTGRFSSKLPWKETLSFRYSAEKSLSNNIVEDYLLNT 177 (383)
Q Consensus 100 Gi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~--~~~GY~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~~~~wP~~~ 177 (383)
||+.++++++++.+++||+||.|+|+++..... .++||+........+..||+|+|.++..|... ...+.||..+
T Consensus 86 Gi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~---~~~~~wP~~~ 162 (356)
T 1gp6_A 86 GIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEK---RDLSIWPKTP 162 (356)
T ss_dssp SCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGG---CCGGGSCCSS
T ss_pred CCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccc---cccccCCCcc
Confidence 999999999999999999999999999987543 57899877655556788999999988665432 2356788754
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHhhc---CccceeEEeecCCCCCCCCccccccccCCCc
Q 016776 178 MGDEFKQFGRVYQDYCESMSRLSLGIMELLAISLGVDRAHFKEFFE---ENDSIMRLNYYPPCQKPELTLGTGPHCDPTS 254 (383)
Q Consensus 178 ~~~~~~~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~~~~~~~~~---~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~ 254 (383)
+.||+++++|+++|.+|+..||++|+++|||++++|.+.+. ...+.||+||||||++++.++|+++|||+|+
T Consensus 163 -----~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~ 237 (356)
T 1gp6_A 163 -----SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSA 237 (356)
T ss_dssp -----TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSS
T ss_pred -----hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCe
Confidence 67999999999999999999999999999999999999987 4778999999999999999999999999999
Q ss_pred eeEEecCCCCCeEEEeCCeEEEecCCCCceEEeeccccccccCCeecCcccccccCCCCCeeeeccccCCCCCc-eEeCC
Q 016776 255 LTILHQDQVGGLQVFVENEWRSISPNFEAFVVNIGDTFMALSNGRYKSCLHRAVVNSQTTRKSLAFFLCPKNDK-VVSPP 333 (383)
Q Consensus 255 lTlL~qd~~~GLqV~~~g~W~~V~p~pgalvVnvGD~L~~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~-~i~P~ 333 (383)
||||+||+++||||+++|+|++|+|+||++||||||+||+||||+|||++|||++++.++|||++||++|+.|+ +|.|+
T Consensus 238 lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl 317 (356)
T 1gp6_A 238 LTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPL 317 (356)
T ss_dssp EEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCC
T ss_pred EEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999889999999999999999 99999
Q ss_pred ccccCCCCCCCCCCCCCHHHHHHHHHHHHHhhcc
Q 016776 334 SELVDTYSSPRIYPDFTWPMLLEFTQKHYRADMK 367 (383)
Q Consensus 334 ~~~~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~ 367 (383)
++++++ ++|++|+++||+||+.........++.
T Consensus 318 ~~~~~~-~~p~~y~~~t~~eyl~~~~~~~~d~~~ 350 (356)
T 1gp6_A 318 PEMVSV-ESPAKFPPRTFAQHIEHKLFGKEQEEL 350 (356)
T ss_dssp GGGCCS-SSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred hhhcCC-CCCccCCCccHHHHHHHHHHhccCcch
Confidence 999999 899999999999999876555544443
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=8e-78 Score=581.08 Aligned_cols=295 Identities=24% Similarity=0.497 Sum_probs=258.2
Q ss_pred CcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHHHHHhhcCCHHHHHHhhccCCCccccCC
Q 016776 60 QVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGVDSSLIADAHRYMDHFFELPLNEKQRARRKLGEHCGYAS 139 (383)
Q Consensus 60 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~ 139 (383)
+||||||+.+.. .+|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..||.+
T Consensus 3 ~iPvIDls~l~~---~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~ 76 (319)
T 1w9y_A 3 NFPIISLDKVNG---VERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEG 76 (319)
T ss_dssp CCCEEEGGGGGS---TTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTT
T ss_pred CCCEEECcccCc---ccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCc
Confidence 599999999852 34678999999999999999999999999999999999999999999999998754 248875
Q ss_pred CCCCcccCCCCceeceecccccccccCchhhhhhhcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHH
Q 016776 140 SFTGRFSSKLPWKETLSFRYSAEKSLSNNIVEDYLLNTMGDEFKQFGRVYQDYCESMSRLSLGIMELLAISLGVDRAHFK 219 (383)
Q Consensus 140 ~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~~~~~ 219 (383)
... ..+..||+|+|.++..|.. ..+.||..+ +.||+++++|+++|.+|+..||++|+++|||++++|.
T Consensus 77 ~~~--e~~~~d~ke~~~~~~~p~~-----~~~~wP~~~-----~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~ 144 (319)
T 1w9y_A 77 VQA--EVTDMDWESTFFLKHLPIS-----NISEVPDLD-----EEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLK 144 (319)
T ss_dssp CCC--CGGGCCCCEEEEEEEESCC-----GGGGCTTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHH
T ss_pred ccc--cCCCCChhhheeeecCCcc-----cccccccch-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 432 2467899999998765543 256788754 8899999999999999999999999999999999999
Q ss_pred HhhcC---ccceeEEeecCCCCCCCCccccccccCCCceeEEecC-CCCCeEEEeCCeEEEecCCCCceEEeeccccccc
Q 016776 220 EFFEE---NDSIMRLNYYPPCQKPELTLGTGPHCDPTSLTILHQD-QVGGLQVFVENEWRSISPNFEAFVVNIGDTFMAL 295 (383)
Q Consensus 220 ~~~~~---~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqV~~~g~W~~V~p~pgalvVnvGD~L~~l 295 (383)
+.+.. ..+.||+||||||++|+.++|+++|||+|+||||+|| +++||||+++|+|++|+|+||++||||||+||+|
T Consensus 145 ~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~ 224 (319)
T 1w9y_A 145 NAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVI 224 (319)
T ss_dssp HHHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHH
T ss_pred HHhcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHH
Confidence 98863 5678999999999999999999999999999999995 7999999999999999999999999999999999
Q ss_pred cCCeecCcccccccCCCCCeeeeccccCCCCCceEeCCccccCCCC---CCCCCCCCCHHHHHHHHHHHHHhhcch-HHH
Q 016776 296 SNGRYKSCLHRAVVNSQTTRKSLAFFLCPKNDKVVSPPSELVDTYS---SPRIYPDFTWPMLLEFTQKHYRADMKT-LEV 371 (383)
Q Consensus 296 SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~P~~~~~~~~~---~p~~y~~~~~~ey~~~~~~~~~~~~~~-l~~ 371 (383)
|||+|||++|||++++.++|||++||++|+.|++|.|+++|+++ + +|++|+++||+||+....+....++.. ++.
T Consensus 225 SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~-~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~ 303 (319)
T 1w9y_A 225 TNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEK-EAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEA 303 (319)
T ss_dssp TTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC---------CCCCCEEHHHHHHTTTTTTCSSHHHHHHH
T ss_pred hCCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCc-ccccCccccCcEeHHHHHHHHHhhhcCcchhHHHH
Confidence 99999999999999988999999999999999999999999998 7 599999999999999766655554433 344
Q ss_pred HH
Q 016776 372 FT 373 (383)
Q Consensus 372 ~~ 373 (383)
++
T Consensus 304 ~~ 305 (319)
T 1w9y_A 304 MK 305 (319)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=4e-76 Score=568.37 Aligned_cols=294 Identities=23% Similarity=0.342 Sum_probs=253.1
Q ss_pred CCcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHHHHHhhcCCHHHHHHhhccCCCccccC
Q 016776 59 LQVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGVDSSLIADAHRYMDHFFELPLNEKQRARRKLGEHCGYA 138 (383)
Q Consensus 59 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~ 138 (383)
.+||||||+.+.+ .+++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.......+||.
T Consensus 5 ~~iPvIDls~~~~----~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~ 80 (312)
T 3oox_A 5 SAIDPVSFSLYAK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYI 80 (312)
T ss_dssp CSSCCEETHHHHH----CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEE
T ss_pred CCCCeEEChHhcc----cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccc
Confidence 4699999998743 466889999999999999999999999999999999999999999999999987544578997
Q ss_pred CCCCCcc--cCCCCceeceecccc-cccccCchhhhhhhcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Q 016776 139 SSFTGRF--SSKLPWKETLSFRYS-AEKSLSNNIVEDYLLNTMGDEFKQFGRVYQDYCESMSRLSLGIMELLAISLGVDR 215 (383)
Q Consensus 139 ~~~~~~~--~~~~d~kE~~~~~~~-p~~~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~ 215 (383)
+...+.. ....||+|.|.++.. +... ......+.+.||+..+.||+++++|+++|.+|+..||++|+++|||++
T Consensus 81 ~~g~e~~~~~~~~D~kE~~~~~~~~~~~~---~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 157 (312)
T 3oox_A 81 PFGVETAKGADHYDLKEFWHMGRDLPPGH---RFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLER 157 (312)
T ss_dssp CCCCCCSTTSCSCCCCEEEEECCCCCTTC---GGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred cccceecCCCCCCCceeeeEeecCCCcCC---cchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence 6544322 356899999988642 2211 111122233344444789999999999999999999999999999999
Q ss_pred hhHHHhhcCccceeEEeecCCCCCCCCccccccccCCCceeEEecCCCCCeEEE-eCCeEEEecCCCCceEEeecccccc
Q 016776 216 AHFKEFFEENDSIMRLNYYPPCQKPELTLGTGPHCDPTSLTILHQDQVGGLQVF-VENEWRSISPNFEAFVVNIGDTFMA 294 (383)
Q Consensus 216 ~~~~~~~~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~g~W~~V~p~pgalvVnvGD~L~~ 294 (383)
++|.+.+..+.+.||+||||||++++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||+
T Consensus 158 ~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~ 237 (312)
T 3oox_A 158 DFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLER 237 (312)
T ss_dssp TTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHH
T ss_pred HHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHH
Confidence 999999988889999999999998655699999999999999999999999997 6899999999999999999999999
Q ss_pred ccCCeecCcccccccCC----CCCeeeeccccCCCCCceEeCCccccCCCCCCCCCC-CCCHHHHHHHHHH
Q 016776 295 LSNGRYKSCLHRAVVNS----QTTRKSLAFFLCPKNDKVVSPPSELVDTYSSPRIYP-DFTWPMLLEFTQK 360 (383)
Q Consensus 295 lSnG~~kS~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~P~~~~~~~~~~p~~y~-~~~~~ey~~~~~~ 360 (383)
||||+|||++|||+.++ ..+|||++||++|+.|++|+|+++|+++ ++|++|+ ++|++||+....+
T Consensus 238 ~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~-~~p~~y~~~~t~~eyl~~r~~ 307 (312)
T 3oox_A 238 LTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTA-ENPDRYPESITADEFLQQRLR 307 (312)
T ss_dssp HTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCS-SSCCSCSSCEEHHHHHHHHHH
T ss_pred HhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCC-CCcccCCCCeeHHHHHHHHHH
Confidence 99999999999998653 5679999999999999999999999999 9999999 9999999986443
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=5.7e-73 Score=550.46 Aligned_cols=289 Identities=22% Similarity=0.309 Sum_probs=253.0
Q ss_pred CCcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHHHHHh-hcCCHHHHHHhhccCCCcccc
Q 016776 59 LQVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGVDSSLIADAHRYMDHF-FELPLNEKQRARRKLGEHCGY 137 (383)
Q Consensus 59 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~F-F~lP~eeK~~~~~~~~~~~GY 137 (383)
.+||||||+.|.+++++.|++++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +||
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~Gy 78 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RAY 78 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TTT
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cCC
Confidence 4699999999988888889999999999999999999999999 999999999999 9999999999975 577
Q ss_pred CCCCCCc--c------cCCCCceeceecccccc-ccc------CchhhhhhhcccCChhhHHHHHHHHHHHHHHHHHHHH
Q 016776 138 ASSFTGR--F------SSKLPWKETLSFRYSAE-KSL------SNNIVEDYLLNTMGDEFKQFGRVYQDYCESMSRLSLG 202 (383)
Q Consensus 138 ~~~~~~~--~------~~~~d~kE~~~~~~~p~-~~~------~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ 202 (383)
.+...+. . .+..||+|.|+++.... +.+ .....+.||... .+++||+++++|+++|.+|+..
T Consensus 79 ~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~---~~p~fr~~~~~y~~~~~~l~~~ 155 (331)
T 1odm_A 79 NKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDET---KHPGFQDFAEQYYWDVFGLSSA 155 (331)
T ss_dssp CTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTT---TSTTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCC---CChHHHHHHHHHHHHHHHHHHH
Confidence 6543321 1 14679999999875421 110 001135677541 1478999999999999999999
Q ss_pred HHHHHHHhcCCChhhHHHhhcCccceeE--EeecC------C---CCCCCC-ccccccccCCCceeEEecCCCCCeEEE-
Q 016776 203 IMELLAISLGVDRAHFKEFFEENDSIMR--LNYYP------P---CQKPEL-TLGTGPHCDPTSLTILHQDQVGGLQVF- 269 (383)
Q Consensus 203 Ll~~la~~Lgl~~~~~~~~~~~~~~~lr--~~~YP------~---~~~~~~-~~g~~~HtD~~~lTlL~qd~~~GLqV~- 269 (383)
||++|+++|||++++|.+.+..+.+.|| +|||| | |++|+. ++|+++|||+|+||||+||+++||||+
T Consensus 156 ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~ 235 (331)
T 1odm_A 156 LLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVET 235 (331)
T ss_dssp HHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEE
T ss_pred HHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEc
Confidence 9999999999999999999988889999 99999 8 888887 899999999999999999999999999
Q ss_pred eCCeEEEecCCCCceEEeeccccccccCCeecCcccccccCCCCCeeeeccccCCCCCceEeCCccccCCCCCCCCCCCC
Q 016776 270 VENEWRSISPNFEAFVVNIGDTFMALSNGRYKSCLHRAVVNSQTTRKSLAFFLCPKNDKVVSPPSELVDTYSSPRIYPDF 349 (383)
Q Consensus 270 ~~g~W~~V~p~pgalvVnvGD~L~~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~P~~~~~~~~~~p~~y~~~ 349 (383)
++| |++|+|+||++||||||+||+||||+|||++|||+. +.++|||++||++|+.|++|.|+++++++ ++ ++|+++
T Consensus 236 ~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~-~~-~~y~~~ 311 (331)
T 1odm_A 236 AAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPN-GK-SDREPL 311 (331)
T ss_dssp TTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTT-CC-CSSCCC
T ss_pred CCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccc-cc-cCCCCc
Confidence 678 999999999999999999999999999999999985 57899999999999999999999999998 77 999999
Q ss_pred CHHHHHHHHHHHH
Q 016776 350 TWPMLLEFTQKHY 362 (383)
Q Consensus 350 ~~~ey~~~~~~~~ 362 (383)
||+||+....+.+
T Consensus 312 t~~e~l~~~~~~~ 324 (331)
T 1odm_A 312 SYGDYLQNGLVSL 324 (331)
T ss_dssp BHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9999998755443
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=6.2e-72 Score=538.58 Aligned_cols=271 Identities=18% Similarity=0.260 Sum_probs=231.5
Q ss_pred CCcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHHHHHhhcCC-HHHHHHhhccC-CCccc
Q 016776 59 LQVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGVDSSLIADAHRYMDHFFELP-LNEKQRARRKL-GEHCG 136 (383)
Q Consensus 59 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~lP-~eeK~~~~~~~-~~~~G 136 (383)
.+||||||+.|.+++.. ++|.+||++||||||+||||+.++++++++++++||+|| .|+|+++.... ...+|
T Consensus 3 ~~iPvIDls~l~~~~~~------~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~G 76 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ------DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRG 76 (311)
T ss_dssp CCCCEEEHHHHHTTCSH------HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSE
T ss_pred CCCcEEEchhhcCCCHH------HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCc
Confidence 46999999988655432 279999999999999999999999999999999999999 99999998753 45789
Q ss_pred cCCCCCCc------ccCCCCceeceecccccccccCchhhhhhhcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016776 137 YASSFTGR------FSSKLPWKETLSFRYSAEKSLSNNIVEDYLLNTMGDEFKQFGRVYQDYCESMSRLSLGIMELLAIS 210 (383)
Q Consensus 137 Y~~~~~~~------~~~~~d~kE~~~~~~~p~~~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~Ll~~la~~ 210 (383)
|.+...+. ..+..||+|+|.++.. .+.|| + +.||+++++|+++|.+|+..||++|+++
T Consensus 77 y~~~~~e~~~~~~~~~~~~d~~E~~~~~~~---------~n~wP--~-----~~fr~~~~~y~~~~~~l~~~ll~~la~~ 140 (311)
T 1dcs_A 77 FTGLESESTAQITNTGSYSDYSMCYSMGTA---------DNLFP--S-----GDFERIWTQYFDRQYTASRAVAREVLRA 140 (311)
T ss_dssp EEEC-----------------CEEEEECSS---------SCCCS--C-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccccccccCCCCCCCcceeeeccCC---------CCCCC--C-----hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98765432 2467899999988643 24687 2 7899999999999999999999999999
Q ss_pred cCC----ChhhHHHhhcCccceeEEeecCCCCCCC--C--ccccccccCCCceeEEecC-CCCC---eEEEeCCeEEEec
Q 016776 211 LGV----DRAHFKEFFEENDSIMRLNYYPPCQKPE--L--TLGTGPHCDPTSLTILHQD-QVGG---LQVFVENEWRSIS 278 (383)
Q Consensus 211 Lgl----~~~~~~~~~~~~~~~lr~~~YP~~~~~~--~--~~g~~~HtD~~~lTlL~qd-~~~G---LqV~~~g~W~~V~ 278 (383)
||| ++++|.+. .+.||+||||||++++ . .+|+++|||+|+||||+|| +++| |||+++|+|++|+
T Consensus 141 Lgl~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~ 216 (311)
T 1dcs_A 141 TGTEPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLP 216 (311)
T ss_dssp TTCCCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECC
T ss_pred cCCCCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCc
Confidence 999 88888765 7889999999999864 3 6889999999999999998 8999 9999999999999
Q ss_pred CCCCceEEeeccccccccCCeecCcccccccCC-----CCCeeeeccccCCCCCceEeCCccccCCCCCCCCC--CCCCH
Q 016776 279 PNFEAFVVNIGDTFMALSNGRYKSCLHRAVVNS-----QTTRKSLAFFLCPKNDKVVSPPSELVDTYSSPRIY--PDFTW 351 (383)
Q Consensus 279 p~pgalvVnvGD~L~~lSnG~~kS~~HRVv~~~-----~~~R~Si~~F~~P~~d~~i~P~~~~~~~~~~p~~y--~~~~~ 351 (383)
|+||++||||||+||+||||+|||++|||++++ .++|||++||++|+.|++|. +++++++ ++|++| +++||
T Consensus 217 p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~-~~p~~y~~~~~t~ 294 (311)
T 1dcs_A 217 YRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLAREC-GFDVSLDGETATF 294 (311)
T ss_dssp CCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHT-TCCCCCCSSEEEH
T ss_pred CCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCC-CCccccCCCCccH
Confidence 999999999999999999999999999999887 78999999999999999999 9999998 899999 99999
Q ss_pred HHHHHH
Q 016776 352 PMLLEF 357 (383)
Q Consensus 352 ~ey~~~ 357 (383)
+||+..
T Consensus 295 ~ey~~~ 300 (311)
T 1dcs_A 295 QDWIGG 300 (311)
T ss_dssp HHHHCS
T ss_pred HHHHHH
Confidence 999874
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.1e-66 Score=494.75 Aligned_cols=257 Identities=22% Similarity=0.317 Sum_probs=218.2
Q ss_pred CCcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHHHHHhhcCCHHHHHHhhccCCCccccC
Q 016776 59 LQVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGVDSSLIADAHRYMDHFFELPLNEKQRARRKLGEHCGYA 138 (383)
Q Consensus 59 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~ 138 (383)
++||||||+.. +++++|.+||++||||||+||||+.++++++++++++||+| |+|+++...++..+||.
T Consensus 2 ~~IPvIDls~~---------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~ 70 (280)
T 3on7_A 2 MKLETIDYRAA---------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFF 70 (280)
T ss_dssp --CCEEETTST---------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEE
T ss_pred CCCCEEECCCh---------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccc
Confidence 47999999963 24678999999999999999999999999999999999997 89999987666689998
Q ss_pred CCC-CCc--ccCCCCceeceecccccccccCchhhhhhhcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Q 016776 139 SSF-TGR--FSSKLPWKETLSFRYSAEKSLSNNIVEDYLLNTMGDEFKQFGRVYQDYCESMSRLSLGIMELLAISLGVDR 215 (383)
Q Consensus 139 ~~~-~~~--~~~~~d~kE~~~~~~~p~~~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~ 215 (383)
+.. .+. .....||+|+|.+. .||..+ +.||+++++|+++|.+|+.+||++||++||++.
T Consensus 71 ~~~~~e~~~~~~~~D~kE~~~~~-------------p~~~~p-----~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 132 (280)
T 3on7_A 71 PASISETAKGHTVKDIKEYYHVY-------------PWGRIP-----DSLRANILAYYEKANTLASELLEWIETYSPDEI 132 (280)
T ss_dssp CCC--------CCCCSCEEEEEC-------------TTSCCC-----GGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred cCccccccCCCCcccHHHHHhcC-------------CCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 654 222 13467999998652 144332 679999999999999999999999999999863
Q ss_pred --hh---HHHhhcCcc-ceeEEeecCCCCCCC--CccccccccCCCceeEEecCCCCCeEEE-eCCeEEEecCCCCceEE
Q 016776 216 --AH---FKEFFEEND-SIMRLNYYPPCQKPE--LTLGTGPHCDPTSLTILHQDQVGGLQVF-VENEWRSISPNFEAFVV 286 (383)
Q Consensus 216 --~~---~~~~~~~~~-~~lr~~~YP~~~~~~--~~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~g~W~~V~p~pgalvV 286 (383)
++ |.+.+..+. +.||+||||||+.++ .++|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||
T Consensus 133 ~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vV 212 (280)
T 3on7_A 133 KAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIII 212 (280)
T ss_dssp HTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEE
T ss_pred hhhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEE
Confidence 32 566666554 899999999999865 5799999999999999999999999998 68999999999999999
Q ss_pred eeccccccccCCeecCcccccccCC----CCCeeeeccccCCCCCceEeCCccccCCCCCCCCCCCCCHHHHHHHHH
Q 016776 287 NIGDTFMALSNGRYKSCLHRAVVNS----QTTRKSLAFFLCPKNDKVVSPPSELVDTYSSPRIYPDFTWPMLLEFTQ 359 (383)
Q Consensus 287 nvGD~L~~lSnG~~kS~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~P~~~~~~~~~~p~~y~~~~~~ey~~~~~ 359 (383)
|+||+||+||||+|||++|||+.++ ..+|||++||++|+.|++|.| ++|++||+....
T Consensus 213 NiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p---------------~ita~~~l~~rl 274 (280)
T 3on7_A 213 NIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE---------------RYTADSYLMERL 274 (280)
T ss_dssp EECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS---------------SCBHHHHHHHHH
T ss_pred EcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC---------------CccHHHHHHHHH
Confidence 9999999999999999999998763 568999999999999998864 489999998533
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.25 E-value=0.038 Score=50.33 Aligned_cols=100 Identities=18% Similarity=0.085 Sum_probs=61.6
Q ss_pred HHHHhcCCChhhHHHhhcCccceeEEeecCCCCCCCCccccccccCCC-----------ceeEEec--C----CCCCeEE
Q 016776 206 LLAISLGVDRAHFKEFFEENDSIMRLNYYPPCQKPELTLGTGPHCDPT-----------SLTILHQ--D----QVGGLQV 268 (383)
Q Consensus 206 ~la~~Lgl~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~-----------~lTlL~q--d----~~~GLqV 268 (383)
.|...|+....++...+.....-+++++|.+-. -..+|.|.. .+|+++. | .-|.|.+
T Consensus 78 ~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf 151 (243)
T 3dkq_A 78 QIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVI 151 (243)
T ss_dssp HHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEE
T ss_pred HHHHHHccCcchhhcccccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEE
Confidence 333444444333332222333458899997632 256777763 4666654 3 1244666
Q ss_pred EeCCeEEEecCCCCceEEeeccccccccCCeecCcccccccCCCCCeeeeccccC
Q 016776 269 FVENEWRSISPNFEAFVVNIGDTFMALSNGRYKSCLHRAVVNSQTTRKSLAFFLC 323 (383)
Q Consensus 269 ~~~g~W~~V~p~pgalvVnvGD~L~~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~ 323 (383)
.....=..|+|..|.+|+.-. ..+|+|..-....|++++.+++
T Consensus 152 ~~~~~~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 152 QDTYGQQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EETTEEEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred eeCCCcEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 655445789999999998642 3689996444568999998775
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.86 E-value=0.65 Score=41.22 Aligned_cols=43 Identities=19% Similarity=0.222 Sum_probs=33.1
Q ss_pred CeEEEecCCCCceEEeeccccccccCCeecCcccccccCC-CCCeeeeccccCCCC
Q 016776 272 NEWRSISPNFEAFVVNIGDTFMALSNGRYKSCLHRAVVNS-QTTRKSLAFFLCPKN 326 (383)
Q Consensus 272 g~W~~V~p~pgalvVnvGD~L~~lSnG~~kS~~HRVv~~~-~~~R~Si~~F~~P~~ 326 (383)
..+..|.|.+|.+||.-+. ..|+|..+. +.+|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 4567899999999988762 489998654 478999999887754
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=87.49 E-value=0.99 Score=40.91 Aligned_cols=80 Identities=21% Similarity=0.315 Sum_probs=55.3
Q ss_pred eeEEeecCCCCCCCCccccccccCCC-----ceeEEec--C-C-----CCCeEEEeCC--eEEEecCCCCceEEeecccc
Q 016776 228 IMRLNYYPPCQKPELTLGTGPHCDPT-----SLTILHQ--D-Q-----VGGLQVFVEN--EWRSISPNFEAFVVNIGDTF 292 (383)
Q Consensus 228 ~lr~~~YP~~~~~~~~~g~~~HtD~~-----~lTlL~q--d-~-----~~GLqV~~~g--~W~~V~p~pgalvVnvGD~L 292 (383)
-+.+..|++. .-....|.|.. .+|+++. + . -|-|.++..+ ....|.|..|.+|+.-.+.
T Consensus 118 e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~- 191 (247)
T 2hbt_A 118 KAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR- 191 (247)
T ss_dssp CEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST-
T ss_pred eEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC-
Confidence 3678888751 12367788773 6888875 2 1 3446777654 6789999999999876431
Q ss_pred ccccCCeecCcccccccCCCCCeeeeccccC
Q 016776 293 MALSNGRYKSCLHRAVVNSQTTRKSLAFFLC 323 (383)
Q Consensus 293 ~~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~ 323 (383)
-.+|.|.. ....|+||+..+.
T Consensus 192 ---------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 192 ---------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp ---------TCCEEECC-BSSCEEEEEEEEE
T ss_pred ---------Cceeeecc-CCCEEEEEEEEEc
Confidence 15899864 5679999988665
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=86.95 E-value=0.79 Score=40.69 Aligned_cols=87 Identities=17% Similarity=0.160 Sum_probs=53.4
Q ss_pred eeEEeecCCCCCCCCccccccccCC--------------CceeEEec--C-CCCC-eEEEeCC-------------eEEE
Q 016776 228 IMRLNYYPPCQKPELTLGTGPHCDP--------------TSLTILHQ--D-QVGG-LQVFVEN-------------EWRS 276 (383)
Q Consensus 228 ~lr~~~YP~~~~~~~~~g~~~HtD~--------------~~lTlL~q--d-~~~G-LqV~~~g-------------~W~~ 276 (383)
-+++++|.+-.. ..+|.|. ..+|+|+. | ..|| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~~------y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQK------YEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTCC------EEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCcc------ccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 477888866322 5567774 24788865 3 2344 3332211 2478
Q ss_pred ecCCCCceEEeeccccccccCCee-cCcccccccCCCCCeeeeccccCC
Q 016776 277 ISPNFEAFVVNIGDTFMALSNGRY-KSCLHRAVVNSQTTRKSLAFFLCP 324 (383)
Q Consensus 277 V~p~pgalvVnvGD~L~~lSnG~~-kS~~HRVv~~~~~~R~Si~~F~~P 324 (383)
|.|..|.+|+.-- ...||.. ..++|+|..-....|+++..+++-
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 9999999887653 2234433 578999864434579999887753
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=85.27 E-value=1 Score=39.96 Aligned_cols=102 Identities=16% Similarity=0.092 Sum_probs=59.7
Q ss_pred HHHHHHHhcCCChhhHHHhhcCccceeEEeecCCCCCCCCccccccccCCC-----------ceeEEec--C-CCCCeEE
Q 016776 203 IMELLAISLGVDRAHFKEFFEENDSIMRLNYYPPCQKPELTLGTGPHCDPT-----------SLTILHQ--D-QVGGLQV 268 (383)
Q Consensus 203 Ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~-----------~lTlL~q--d-~~~GLqV 268 (383)
|.+-|+..+|++.+ ....+++.+|.+... ..+|.|.. .+|+++. | ..||=-+
T Consensus 95 i~~Ri~~~~gl~~~--------~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~ 160 (216)
T 3itq_A 95 IEKRISSIMNVPAS--------HGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETF 160 (216)
T ss_dssp HHHHHHHHHTSCGG--------GBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEE
T ss_pred HHHHHHHhcCceec--------cccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCceeE
Confidence 33344445677632 223578888876432 56777763 3787775 3 2334223
Q ss_pred EeCCeEEEecCCCCceEEeeccccccccCCe-ecCcccccccCCCCCeeeeccccC
Q 016776 269 FVENEWRSISPNFEAFVVNIGDTFMALSNGR-YKSCLHRAVVNSQTTRKSLAFFLC 323 (383)
Q Consensus 269 ~~~g~W~~V~p~pgalvVnvGD~L~~lSnG~-~kS~~HRVv~~~~~~R~Si~~F~~ 323 (383)
... .=+.|.|..|.+|+.-. ...||. -..++|+|..-....|+++..+++
T Consensus 161 Fp~-~~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 161 FPK-LNLSVHPRKGMAVYFEY----FYQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp ETT-TTEEECCCTTCEEEEEC----CCSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred ecC-CCCEEecCCCeEEEEec----cCCCCCCCCccccccceeccccEEEEEeeEe
Confidence 322 12788999999887653 112332 246899986444457999887764
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=77.02 E-value=7.6 Score=34.74 Aligned_cols=85 Identities=15% Similarity=0.109 Sum_probs=52.8
Q ss_pred ceeEEeecCCCCCCCCccccccccCC--------CceeEEecCCCCCeEEEeC-----------CeEEEecCCCCceEEe
Q 016776 227 SIMRLNYYPPCQKPELTLGTGPHCDP--------TSLTILHQDQVGGLQVFVE-----------NEWRSISPNFEAFVVN 287 (383)
Q Consensus 227 ~~lr~~~YP~~~~~~~~~g~~~HtD~--------~~lTlL~qd~~~GLqV~~~-----------g~W~~V~p~pgalvVn 287 (383)
..+-+|+|.+-. -++++|.|- .+.||-+.. ..=+.+... +..+.+.-.+|+++|.
T Consensus 126 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM 199 (238)
T 2iuw_A 126 NSLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIM 199 (238)
T ss_dssp CEEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTCEEEE
T ss_pred CEEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEE
Confidence 456799998742 268889985 233333331 122333321 3688888899999999
Q ss_pred eccccccccCCeecCcccccccCCCCCeeeeccccC
Q 016776 288 IGDTFMALSNGRYKSCLHRAVVNSQTTRKSLAFFLC 323 (383)
Q Consensus 288 vGD~L~~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~ 323 (383)
-|+.=..|..|.-+.. .....|+|+.|=..
T Consensus 200 ~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 200 EGATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp EETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred ChhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 9987655654443211 13568999998653
No 13
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=74.61 E-value=7.4 Score=33.94 Aligned_cols=81 Identities=12% Similarity=0.032 Sum_probs=49.1
Q ss_pred ceeEEeecCCCCCCCCccccccccCCC--------ceeEEecCCCCCeEEEeC----------CeEEEecCCCCceEEee
Q 016776 227 SIMRLNYYPPCQKPELTLGTGPHCDPT--------SLTILHQDQVGGLQVFVE----------NEWRSISPNFEAFVVNI 288 (383)
Q Consensus 227 ~~lr~~~YP~~~~~~~~~g~~~HtD~~--------~lTlL~qd~~~GLqV~~~----------g~W~~V~p~pgalvVnv 288 (383)
..+-+|+|.+-. -+++.|.|-- +.+|-+.. ..-+.+... +..+.+.-.+|+++|.-
T Consensus 100 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG~-~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~ 173 (204)
T 3s57_A 100 NFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFGA-SRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMN 173 (204)
T ss_dssp SEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEES-CEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEE
T ss_pred ceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECCC-ceEEEEEEcCCCccccccCCceEEEECCCCCEEEEC
Confidence 346699998743 2688898862 22333321 122333321 24677888889999888
Q ss_pred ccccccccCCeecCcccccccC--CCCCeeeeccc
Q 016776 289 GDTFMALSNGRYKSCLHRAVVN--SQTTRKSLAFF 321 (383)
Q Consensus 289 GD~L~~lSnG~~kS~~HRVv~~--~~~~R~Si~~F 321 (383)
|+.=..|. |.|-.. ....|+|+.|-
T Consensus 174 g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 174 HPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp TTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred chhhheeE--------eeccccCCCCCCEEEEEee
Confidence 87665554 554322 23679999873
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=65.54 E-value=30 Score=30.23 Aligned_cols=80 Identities=16% Similarity=0.088 Sum_probs=49.3
Q ss_pred ceeEEeecCCCCCCCCccccccccCC-----C--ceeEEecCCCCCeEEEe---CCeEEEecCCCCceEEeecccccccc
Q 016776 227 SIMRLNYYPPCQKPELTLGTGPHCDP-----T--SLTILHQDQVGGLQVFV---ENEWRSISPNFEAFVVNIGDTFMALS 296 (383)
Q Consensus 227 ~~lr~~~YP~~~~~~~~~g~~~HtD~-----~--~lTlL~qd~~~GLqV~~---~g~W~~V~p~pgalvVnvGD~L~~lS 296 (383)
..+-+|+|.+- . +++.|.|- + ++||-+.. ..-+.+.. .+..+.+.-.+|+++|.-|+.- .|
T Consensus 105 n~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~- 175 (211)
T 3i3q_A 105 DACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF- 175 (211)
T ss_dssp CEEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC-
T ss_pred CEEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECCC-CeEEEEecccCCCceEEEECCCCCEEEECchHH-ce-
Confidence 34679999762 3 79999993 2 22333331 12233332 3567888888999999988762 22
Q ss_pred CCeecCcccccccCC-------CCCeeeecccc
Q 016776 297 NGRYKSCLHRAVVNS-------QTTRKSLAFFL 322 (383)
Q Consensus 297 nG~~kS~~HRVv~~~-------~~~R~Si~~F~ 322 (383)
.|.|.... ...|+|+.|-.
T Consensus 176 -------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 -------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp -------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred -------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 46664322 24699998853
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=48.67 E-value=19 Score=34.13 Aligned_cols=105 Identities=13% Similarity=0.114 Sum_probs=64.3
Q ss_pred cceeEEeecCCCCCCCCccccccccCCC------ceeEEecCCCCCeEEEe-CCeEEEecCCCCceEEeeccccccccCC
Q 016776 226 DSIMRLNYYPPCQKPELTLGTGPHCDPT------SLTILHQDQVGGLQVFV-ENEWRSISPNFEAFVVNIGDTFMALSNG 298 (383)
Q Consensus 226 ~~~lr~~~YP~~~~~~~~~g~~~HtD~~------~lTlL~qd~~~GLqV~~-~g~W~~V~p~pgalvVnvGD~L~~lSnG 298 (383)
...+-+|+|.+- . ++++|.|-. +.||-+. ...-+.+.. +|.++.+.-.+|+++|.-|+.=..|..|
T Consensus 197 ~n~~lvN~Y~~G-----~-~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~ 269 (345)
T 3tht_A 197 PDQMTINQYEPG-----Q-GIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHG 269 (345)
T ss_dssp CSEEEEEEECTT-----C-CEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEE
T ss_pred CCEEEEEEecCC-----C-CEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEcc
Confidence 345779999762 2 789999984 2333332 122333333 4678999999999999999988878665
Q ss_pred eecCcccccc------------------cCCCCCeeeeccccCCCCCceEeC-CccccCC
Q 016776 299 RYKSCLHRAV------------------VNSQTTRKSLAFFLCPKNDKVVSP-PSELVDT 339 (383)
Q Consensus 299 ~~kS~~HRVv------------------~~~~~~R~Si~~F~~P~~d~~i~P-~~~~~~~ 339 (383)
.-+-...-+- ......|+|+.|=.-+...+ .+ -++++|.
T Consensus 270 I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c--~C~~~~~cd~ 327 (345)
T 3tht_A 270 ITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPC--NCSYPLVCDS 327 (345)
T ss_dssp ECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCC--CCSCTTTCTT
T ss_pred CCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCc--CCCCCCcccC
Confidence 4443322210 01234699999987665432 22 4455554
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=42.91 E-value=6.9 Score=38.45 Aligned_cols=53 Identities=9% Similarity=0.181 Sum_probs=39.4
Q ss_pred CCcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHHHHHhhc
Q 016776 59 LQVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGVDSSLIADAHRYMDHFFE 118 (383)
Q Consensus 59 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~ 118 (383)
.-||.||++++.++. +.++..+..++.|++.|.|. ||.+...+..+...+|.+
T Consensus 99 ~~iP~i~f~di~~~~------~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 99 AVWPVLSYADIKAGH------VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CSSCEEEHHHHHHTC------CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCcceecHHHhcCCC------CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 359999999875432 12345677899999988877 898888887777777763
No 17
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=42.25 E-value=23 Score=32.69 Aligned_cols=63 Identities=19% Similarity=0.150 Sum_probs=40.3
Q ss_pred ccccccCC--------CceeEEec-CCCCCeEEEeCCeEEEecCCCCc-eEEeeccccccccCCeecCcccccccCCCCC
Q 016776 245 GTGPHCDP--------TSLTILHQ-DQVGGLQVFVENEWRSISPNFEA-FVVNIGDTFMALSNGRYKSCLHRAVVNSQTT 314 (383)
Q Consensus 245 g~~~HtD~--------~~lTlL~q-d~~~GLqV~~~g~W~~V~p~pga-lvVnvGD~L~~lSnG~~kS~~HRVv~~~~~~ 314 (383)
.+.+|.|+ +.+-+.+. ...+|.....+|+-+..++ |. .++|. +..|.|.++++.+
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~~d~-------------~~~H~v~N~g~~~ 167 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWFLDA-------------ATVHSAVNFSEIS 167 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEECCT-------------TSCEEEEESSSSC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEEEcC-------------CCeeEEEcCCCCC
Confidence 38899998 22333332 2346666666675555544 33 33332 4589999999999
Q ss_pred eeeecccc
Q 016776 315 RKSLAFFL 322 (383)
Q Consensus 315 R~Si~~F~ 322 (383)
|+.+.+=+
T Consensus 168 RIhLv~D~ 175 (290)
T 1e5r_A 168 RQSLCVDF 175 (290)
T ss_dssp CCEEEEEE
T ss_pred eEEEEEEe
Confidence 99998755
No 18
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=41.91 E-value=54 Score=29.46 Aligned_cols=35 Identities=6% Similarity=0.167 Sum_probs=29.6
Q ss_pred HHHHHhhhcceEEEeccCCCHHHHHHHHHHHHHhhc
Q 016776 83 LVGEACRKHGFFLVVNHGVDSSLIADAHRYMDHFFE 118 (383)
Q Consensus 83 ~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~ 118 (383)
+..+.+.+.||+.|.|- ++++.++++.+...+.++
T Consensus 7 e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 41 (291)
T 2opw_A 7 SQLQKFQQDGFLVLEGF-LSAEECVAMQQRIGEIVA 41 (291)
T ss_dssp HHHHHHHHHSEEEETTS-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEecCC-CCHHHHHHHHHHHHHHHh
Confidence 45678999999999875 789999999999888774
No 19
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=41.37 E-value=60 Score=30.25 Aligned_cols=47 Identities=15% Similarity=0.051 Sum_probs=33.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhcceEEEeccCCC----HHHHHHHHHHHHHhhc
Q 016776 69 FLSDDPVAAKEASRLVGEACRKHGFFLVVNHGVD----SSLIADAHRYMDHFFE 118 (383)
Q Consensus 69 l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi~----~~l~~~~~~~~~~FF~ 118 (383)
|..+++++ +.+++.+.++.-||..=.+|||+ .+-+..+.+++++|++
T Consensus 298 l~~g~~e~---i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 298 LLPGPVDK---IKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CTTCCHHH---HHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred hcCCCHHH---HHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 44566643 44455566677788666689865 6789999999999985
No 20
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=39.48 E-value=11 Score=36.35 Aligned_cols=52 Identities=15% Similarity=0.103 Sum_probs=38.5
Q ss_pred CcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHHHHHhhcC
Q 016776 60 QVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGVDSSLIADAHRYMDHFFEL 119 (383)
Q Consensus 60 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~l 119 (383)
++|.||++.+.++ . +.++++.+|+.++|+..+.|-.++++. ..+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~~-d----~~~~~~~~~l~~~Gvv~frg~~~~~~~---~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY-D----EHAYKWLSTLKKVGIVRLTGASDKPGE---VSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC-H----HHHHHHHHHHHHHSEEEEECCCSSTTH---HHHHHHHHSCC
T ss_pred CCCccCHHHHhcC-H----HHHHHHHHHHHhcCEEEEeCCCCCHHH---HHHHHHHhCCC
Confidence 6899999876532 2 456789999999999999998887543 44556666443
No 21
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=39.19 E-value=47 Score=28.69 Aligned_cols=43 Identities=12% Similarity=0.144 Sum_probs=31.8
Q ss_pred eEEeeccccccccCCee----cCcccccccCCCCCeeeecc-ccCCCC
Q 016776 284 FVVNIGDTFMALSNGRY----KSCLHRAVVNSQTTRKSLAF-FLCPKN 326 (383)
Q Consensus 284 lvVnvGD~L~~lSnG~~----kS~~HRVv~~~~~~R~Si~~-F~~P~~ 326 (383)
..+.||+.-..|..|+. -|-+|.|.+.++..|+-+.+ |.+|..
T Consensus 139 ~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~rPdl 186 (197)
T 3rcq_A 139 CKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPEL 186 (197)
T ss_dssp EEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEECTTS
T ss_pred cEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeeeCCCC
Confidence 44567777777887754 36789999988899998765 455655
No 22
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=39.08 E-value=30 Score=20.37 Aligned_cols=17 Identities=24% Similarity=0.499 Sum_probs=15.1
Q ss_pred HHHHHHHHHhhhcceEE
Q 016776 79 EASRLVGEACRKHGFFL 95 (383)
Q Consensus 79 ~~~~~l~~A~~~~GFF~ 95 (383)
++++.|.-.|.+-|||+
T Consensus 10 ~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHhccCcccc
Confidence 67788899999999998
No 23
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=34.73 E-value=23 Score=30.74 Aligned_cols=36 Identities=36% Similarity=0.445 Sum_probs=28.2
Q ss_pred CcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCC
Q 016776 60 QVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGV 101 (383)
Q Consensus 60 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi 101 (383)
.||++++.... ++ ++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g--~~----~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG--SP----ELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT--CH----HHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC--cH----HHHHHHHHHhccCCEEEEcCCCc
Confidence 69999987542 33 56677888888888999999995
No 24
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.42 E-value=18 Score=25.97 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHhhc
Q 016776 184 QFGRVYQDYCESMSRLSLGIMELLAISLGVDRAHFKEFFE 223 (383)
Q Consensus 184 ~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~~~~~~~~~ 223 (383)
.-+..++.|+..-.+-...-+..||+.+||+.+.+.-.|.
T Consensus 15 ~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 15 DHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 3468888888877777777788999999999998877764
No 25
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=32.06 E-value=38 Score=30.49 Aligned_cols=51 Identities=14% Similarity=0.114 Sum_probs=36.4
Q ss_pred CCCcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHHHHHhh
Q 016776 58 ELQVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGVDSSLIADAHRYMDHFF 117 (383)
Q Consensus 58 ~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF 117 (383)
.++|+-||++... +. +..++|.+++.++|+..+.|-.++.+.. .+.++.|=
T Consensus 15 Gaei~gvdl~~~l--~~----~~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~G 65 (283)
T 1otj_A 15 GAQISGADLTRPL--SD----NQFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRFG 65 (283)
T ss_dssp CEEEESCCSSSCC--CH----HHHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTTS
T ss_pred eEEEECCCcCccC--CH----HHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHhC
Confidence 3468889999854 22 3456799999999999999988876443 34455553
No 26
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=30.47 E-value=30 Score=30.07 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=28.0
Q ss_pred CcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCC
Q 016776 60 QVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGV 101 (383)
Q Consensus 60 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi 101 (383)
.||++++... +++ ++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATF--GTR----ELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCc
Confidence 6899988754 233 56677888888888899999995
No 27
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=29.64 E-value=1.1e+02 Score=25.77 Aligned_cols=42 Identities=10% Similarity=0.158 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHhhhcceEEEecc-CCCHHHHHHHHHHHHHh
Q 016776 75 VAAKEASRLVGEACRKHGFFLVVNH-GVDSSLIADAHRYMDHF 116 (383)
Q Consensus 75 ~~r~~~~~~l~~A~~~~GFF~l~nH-Gi~~~l~~~~~~~~~~F 116 (383)
+.+.+++++|.+.+++...++|+++ |++...+.+++...+.-
T Consensus 6 ~~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~~ 48 (180)
T 1zav_A 6 QQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREK 48 (180)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 4567888899999999999888875 89988888888776643
No 28
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=28.71 E-value=38 Score=29.93 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=27.9
Q ss_pred CcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCC
Q 016776 60 QVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGV 101 (383)
Q Consensus 60 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi 101 (383)
.||++++... ++. ++++.+.+++.+.-.+.+.|||+
T Consensus 161 ~v~~~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 161 GISVVEFEKP--GSV----ELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp CCEEECCCST--TCH----HHHHHHHHHTSSCSEEEETTSCE
T ss_pred CceEecCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCc
Confidence 5999998754 333 56667888888888899999995
No 29
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=28.67 E-value=1.1e+02 Score=25.56 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhhhcc-eEEEec-cCCCHHHHHHHHHHHHH
Q 016776 76 AAKEASRLVGEACRKHG-FFLVVN-HGVDSSLIADAHRYMDH 115 (383)
Q Consensus 76 ~r~~~~~~l~~A~~~~G-FF~l~n-HGi~~~l~~~~~~~~~~ 115 (383)
.+.+++++|.+.+++.. .++|.+ +|++...+.+++...+.
T Consensus 5 ~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~ 46 (173)
T 2j01_J 5 RNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQ 46 (173)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 56678888999999988 777766 48988877777776653
No 30
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=27.41 E-value=40 Score=22.31 Aligned_cols=29 Identities=21% Similarity=0.133 Sum_probs=15.5
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHhhh
Q 016776 62 PLIDLGGFLSDDPVAAKEASRLVGEACRK 90 (383)
Q Consensus 62 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 90 (383)
|.|.+.-+...++++++++++.|.+++.+
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~ 29 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMAN 29 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444433333555666666666666554
No 31
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=27.38 E-value=40 Score=29.01 Aligned_cols=36 Identities=33% Similarity=0.394 Sum_probs=27.1
Q ss_pred Cccee-eCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCC
Q 016776 60 QVPLI-DLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGV 101 (383)
Q Consensus 60 ~IPvI-Dls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi 101 (383)
.||++ ++... +++ ++++.+.+++.+.-.+.|.|||+
T Consensus 117 ~ip~~~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVS--ATE----EAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCS--SSH----HHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCC--CcH----HHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 77643 233 56667888888888899999994
No 32
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=25.94 E-value=56 Score=29.70 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=37.2
Q ss_pred CCCcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccC-CCHHHHHHHHHHHHHhhc
Q 016776 58 ELQVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHG-VDSSLIADAHRYMDHFFE 118 (383)
Q Consensus 58 ~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHG-i~~~l~~~~~~~~~~FF~ 118 (383)
..+|+-||++... +. +..++|.+++.++|+..+.|-. ++. ++..+.++.|=.
T Consensus 25 Gaei~gvdl~~~l--~~----~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 25 GAEIRGVKLSPDL--DA----ATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp CEEEESCCCCTTC--CH----HHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred ceEEeCCCccccC--CH----HHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 3468888999854 22 3456799999999999999887 875 445555666543
No 33
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=25.90 E-value=45 Score=22.02 Aligned_cols=29 Identities=14% Similarity=0.185 Sum_probs=16.2
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHhhh
Q 016776 62 PLIDLGGFLSDDPVAAKEASRLVGEACRK 90 (383)
Q Consensus 62 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 90 (383)
|.|.+.-+...++++++++++.|.+++.+
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~ 29 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKE 29 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44555433333556666666666666655
No 34
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=24.70 E-value=84 Score=32.05 Aligned_cols=82 Identities=22% Similarity=0.282 Sum_probs=51.7
Q ss_pred eEEeecCCCCCCCCccccccccCC-C--ceeEEec--C--------CCCCeEEEeC--------CeEEEecCCCCceEEe
Q 016776 229 MRLNYYPPCQKPELTLGTGPHCDP-T--SLTILHQ--D--------QVGGLQVFVE--------NEWRSISPNFEAFVVN 287 (383)
Q Consensus 229 lr~~~YP~~~~~~~~~g~~~HtD~-~--~lTlL~q--d--------~~~GLqV~~~--------g~W~~V~p~pgalvVn 287 (383)
+.++.|++-. -+..|.|. + .||+++. + ..|-|+++.. .....|.|..|.+|+.
T Consensus 126 ~~~a~Y~~G~------fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F 199 (633)
T 3kt7_A 126 MSINTYTKGC------HLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFF 199 (633)
T ss_dssp EEEEEECTTC------EEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEE
T ss_pred EEEEEeCCCC------eeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEE
Confidence 6677886532 37789995 2 3666663 2 2345877742 2477899999999987
Q ss_pred eccccccccC-CeecCcccccc-cCCCCCeeeeccccC-CCC
Q 016776 288 IGDTFMALSN-GRYKSCLHRAV-VNSQTTRKSLAFFLC-PKN 326 (383)
Q Consensus 288 vGD~L~~lSn-G~~kS~~HRVv-~~~~~~R~Si~~F~~-P~~ 326 (383)
.- . + ..+|.|. +..++.|+||+-.++ |..
T Consensus 200 ~v-------sp~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 200 KV-------LPG---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp EC-------CTT---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred Ec-------CCC---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 52 1 1 2467652 112789999986654 443
No 35
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=24.67 E-value=1e+02 Score=26.76 Aligned_cols=41 Identities=7% Similarity=0.083 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhhhcceEEEec-cCCCHHHHHHHHHHHHH
Q 016776 75 VAAKEASRLVGEACRKHGFFLVVN-HGVDSSLIADAHRYMDH 115 (383)
Q Consensus 75 ~~r~~~~~~l~~A~~~~GFF~l~n-HGi~~~l~~~~~~~~~~ 115 (383)
+.+++++++|.+.+.++..++|++ +|+....+++++...|.
T Consensus 3 e~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 3 PWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 456778889999999998888886 58998888888877663
No 36
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=23.89 E-value=75 Score=21.31 Aligned_cols=28 Identities=14% Similarity=0.106 Sum_probs=17.1
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHhhh
Q 016776 62 PLIDLGGFLSDDPVAAKEASRLVGEACRK 90 (383)
Q Consensus 62 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 90 (383)
|+|.+.- ...+.++++++++.|.+++.+
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~ 28 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAE 28 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHH
Confidence 4555544 334666777777777776654
No 37
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=23.58 E-value=61 Score=21.26 Aligned_cols=21 Identities=14% Similarity=0.272 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHhcCCChhh
Q 016776 197 SRLSLGIMELLAISLGVDRAH 217 (383)
Q Consensus 197 ~~l~~~Ll~~la~~Lgl~~~~ 217 (383)
.+|+..|.+++++.||.++++
T Consensus 20 ~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 20 KNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHhCcCccc
Confidence 478888999999999999754
No 38
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=22.68 E-value=32 Score=29.65 Aligned_cols=35 Identities=17% Similarity=0.292 Sum_probs=25.8
Q ss_pred CcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcc---eEEEeccCC
Q 016776 60 QVPLIDLGGFLSDDPVAAKEASRLVGEACRKHG---FFLVVNHGV 101 (383)
Q Consensus 60 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~G---FF~l~nHGi 101 (383)
.||+++.. .+. +++++.+.+++.+.+ .+.|.|||+
T Consensus 139 ~vp~~~~~---~g~----~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNE---QNI----PLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCC---SCH----HHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCC---CCH----HHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 68888764 222 367778888888765 788999995
No 39
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=22.51 E-value=58 Score=21.69 Aligned_cols=21 Identities=19% Similarity=0.170 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHhcCCChhh
Q 016776 197 SRLSLGIMELLAISLGVDRAH 217 (383)
Q Consensus 197 ~~l~~~Ll~~la~~Lgl~~~~ 217 (383)
.+|+..|.+++++.||.++++
T Consensus 18 ~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 18 RELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHhCCCccc
Confidence 478888889999999999764
No 40
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=21.99 E-value=47 Score=30.11 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=27.8
Q ss_pred CcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEeccCC
Q 016776 60 QVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNHGV 101 (383)
Q Consensus 60 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi 101 (383)
.||++++... ++. ++++.+.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP--GTD----AIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCS--SSH----HHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCC--CCH----HHHHHHHHHHccCCEEEEcCCCc
Confidence 5899887643 333 56677888888888999999995
No 41
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=21.59 E-value=60 Score=21.96 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=17.2
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHhhh
Q 016776 62 PLIDLGGFLSDDPVAAKEASRLVGEACRK 90 (383)
Q Consensus 62 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 90 (383)
|+|.+.-+...++++++++++.|.+++.+
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~ 29 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHE 29 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444443334566777777777777665
No 42
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=21.56 E-value=66 Score=29.05 Aligned_cols=38 Identities=21% Similarity=0.492 Sum_probs=26.7
Q ss_pred CcceeeCCC-------CCCCCHHHHHHHHHHHHHHhhhcceEEEeccCC
Q 016776 60 QVPLIDLGG-------FLSDDPVAAKEASRLVGEACRKHGFFLVVNHGV 101 (383)
Q Consensus 60 ~IPvIDls~-------l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nHGi 101 (383)
.||++++.. ...+++ ++++.|.+++.+.-.+.|.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~----ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSP----DVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSH----HHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCH----HHHHHHHHHhccCCEEEEcCCce
Confidence 589988631 122243 55667888888888899999995
No 43
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=20.26 E-value=24 Score=26.60 Aligned_cols=17 Identities=53% Similarity=0.677 Sum_probs=14.5
Q ss_pred cccccCCeecCcccccc
Q 016776 292 FMALSNGRYKSCLHRAV 308 (383)
Q Consensus 292 L~~lSnG~~kS~~HRVv 308 (383)
|..-|||+|||++.-|+
T Consensus 49 lrktsngrykstlklvv 65 (131)
T 2vf9_A 49 LRKTSNGRYKSTLKLVV 65 (131)
T ss_dssp EEECTTSEEEEEEEEEE
T ss_pred EEecCCCceeeeEEEEE
Confidence 45789999999998875
No 44
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=20.10 E-value=93 Score=28.49 Aligned_cols=53 Identities=19% Similarity=0.202 Sum_probs=37.7
Q ss_pred CCCcceeeCCCCCCCCHHHHHHHHHHHHHHhhhcceEEEecc-CCCHHHHHHHHHHHHHhhcC
Q 016776 58 ELQVPLIDLGGFLSDDPVAAKEASRLVGEACRKHGFFLVVNH-GVDSSLIADAHRYMDHFFEL 119 (383)
Q Consensus 58 ~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~l~nH-Gi~~~l~~~~~~~~~~FF~l 119 (383)
.++|+=|||+... +. +..++|.+|+.++|...+.|- .++.+ +..+.++.|=.+
T Consensus 19 Gaei~gvdl~~~L--~d----~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 19 GARVDGVRLGGDL--DD----ATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp CEEEESCCCSTTC--CH----HHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred cceEeCCCccccC--CH----HHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 3478889999533 23 445679999999999999998 78764 444566666443
No 45
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=20.05 E-value=60 Score=18.46 Aligned_cols=13 Identities=31% Similarity=0.278 Sum_probs=10.3
Q ss_pred eEEEeCCeEEEec
Q 016776 266 LQVFVENEWRSIS 278 (383)
Q Consensus 266 LqV~~~g~W~~V~ 278 (383)
.-|+++|.|+...
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 4678999999764
Done!