Query 016781
Match_columns 383
No_of_seqs 165 out of 1695
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 03:41:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016781.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016781hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kq8a_ a.4.5.14 (A:) HFH-1 (H 26.1 45 0.0033 21.8 4.4 50 328-378 18-71 (75)
2 d1d5va_ a.4.5.14 (A:) Adipocyt 23.7 41 0.003 23.0 4.0 51 327-378 25-78 (94)
3 d2c6ya1 a.4.5.14 (A:1-98) Inte 22.7 79 0.0057 21.7 5.4 50 328-378 25-77 (98)
4 d2hdca_ a.4.5.14 (A:) Genesis 18.6 52 0.0038 22.7 3.6 50 328-378 24-76 (97)
5 d2heka1 a.211.1.1 (A:1-369) Hy 7.2 80 0.0058 26.6 1.8 16 99-114 78-93 (369)
6 d2o6ia1 a.211.1.1 (A:1-453) Hy 6.3 82 0.006 28.0 1.4 14 101-114 106-119 (453)
7 d2e9xb1 a.278.1.2 (B:62-173) D 6.0 1.5E+02 0.011 20.5 2.5 30 316-345 18-47 (112)
8 d1h8ba_ a.39.1.7 (A:) alpha-Ac 5.7 1E+02 0.0073 19.9 1.2 19 25-43 18-36 (73)
9 d1kcfa1 a.140.2.1 (A:3-38) Mit 4.9 2.5E+02 0.018 14.5 2.3 29 102-130 6-34 (36)
10 d3cmna1 d.92.1.16 (A:43-391) U 4.6 86 0.0063 26.8 0.3 25 99-123 162-187 (346)
No 1
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=26.08 E-value=45 Score=21.79 Aligned_cols=50 Identities=14% Similarity=0.304 Sum_probs=29.5
Q ss_pred cHHHHHHHHHhhhhcccccCCccHHHHHHHHh--ccc-EEecCCCCCC-CccEEE
Q 016781 328 HAMEATKAIKPILGEYYQFDGTPFYKAMWREA--KEC-LYVEPDEGDQ-NKGVFW 378 (383)
Q Consensus 328 ~Lp~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~-~~~~~~~~~~-~~~~~~ 378 (383)
-|.++++.+++.+| |++.....+-.++.-++ ..| ..++++.++. +||-+|
T Consensus 18 tL~eIy~~i~~~fp-y~r~~~~gWkNSIRHnLS~n~~F~kv~r~~~~~~gKg~~W 71 (75)
T d1kq8a_ 18 TLAEINEYLMGKFP-FFRGSYTGWRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYW 71 (75)
T ss_dssp CHHHHHHHHHHHCT-TGGGTCSCCHHHHHHHHHHHTCCEECSSCSCCSSSCCCCE
T ss_pred cHHHHHHHHHHhCc-ccccCCccchhHhhecccccceeEecCCCCCCCCCCccEE
Confidence 47788888887774 45554444333444444 233 5556665554 788766
No 2
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.67 E-value=41 Score=23.05 Aligned_cols=51 Identities=18% Similarity=0.393 Sum_probs=31.7
Q ss_pred ccHHHHHHHHHhhhhcccccCCccHHHHHHHHh--ccc-EEecCCCCCCCccEEE
Q 016781 327 YHAMEATKAIKPILGEYYQFDGTPFYKAMWREA--KEC-LYVEPDEGDQNKGVFW 378 (383)
Q Consensus 327 y~Lp~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~-~~~~~~~~~~~~~~~~ 378 (383)
--|.++++.+++.+ +|++.....+-.++.-+. ..| ..++++.++.+||-+|
T Consensus 25 ltL~eIY~~i~~~f-pyfr~~~~gWkNSIRHnLSln~~F~kv~~~~~~~gkg~~W 78 (94)
T d1d5va_ 25 ITLNGIYQFIMDRF-PFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYW 78 (94)
T ss_dssp BCHHHHHHHHHHHC-THHHHCCTTHHHHHHHHHHHCSSEEECCCCTTSCSCCCCE
T ss_pred ccHHHHHHHHHHHC-CccCccccchHHHHHHHccccceEEEcCcCCCCCCCCceE
Confidence 35788888888777 455655444333455444 333 4456677777888765
No 3
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.69 E-value=79 Score=21.68 Aligned_cols=50 Identities=16% Similarity=0.316 Sum_probs=30.6
Q ss_pred cHHHHHHHHHhhhhcccccCCccHHHHHHHHh--ccc-EEecCCCCCCCccEEE
Q 016781 328 HAMEATKAIKPILGEYYQFDGTPFYKAMWREA--KEC-LYVEPDEGDQNKGVFW 378 (383)
Q Consensus 328 ~Lp~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~-~~~~~~~~~~~~~~~~ 378 (383)
-|.++++.+++.+| |++.....+-.++.-++ ..| ..+.++.++.+||-+|
T Consensus 25 tL~eIy~~i~~~fp-yfr~~~~gWkNSIRHnLS~n~~F~kv~r~~~~~gKg~~W 77 (98)
T d2c6ya1 25 TLNGIYTHITKNYP-YYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFW 77 (98)
T ss_dssp EHHHHHHHHHHHCT-TSCTTCHHHHHHHHHHHHHSTTEEEECCCTTSCCSSCEE
T ss_pred cHHHHHHHHHHhCc-ccccCCCCcchhhchhcccccceEeccCCCCCCCCCceE
Confidence 47888888887773 55654433223444444 344 4466667777888876
No 4
>d2hdca_ a.4.5.14 (A:) Genesis {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=18.64 E-value=52 Score=22.65 Aligned_cols=50 Identities=16% Similarity=0.420 Sum_probs=31.1
Q ss_pred cHHHHHHHHHhhhhcccccCCccHHHHHHHHhc--cc-EEecCCCCCCCccEEE
Q 016781 328 HAMEATKAIKPILGEYYQFDGTPFYKAMWREAK--EC-LYVEPDEGDQNKGVFW 378 (383)
Q Consensus 328 ~Lp~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~--~~-~~~~~~~~~~~~~~~~ 378 (383)
-|.++++.+++.+| |++.....+-.++.-+++ .| ..+.++.++.+||-+|
T Consensus 24 tL~eIY~~i~~~fp-yfr~~~~gWkNSIRHnLSln~~F~kv~~~~~~~gKg~~W 76 (97)
T d2hdca_ 24 TLSGICEFISNRFP-YYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYW 76 (97)
T ss_dssp CHHHHHHHHHHHCH-HHHHHCSSHHHHHHHHHHHHHCCEEECSCTTCSSSCCEE
T ss_pred cHHHHHHHHHHhCc-cccCCCCCchhhhhhhcchhhhhcccCCCCCCCCCCcEE
Confidence 47778888887773 445444443334544442 23 4567777888899776
No 5
>d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]}
Probab=7.15 E-value=80 Score=26.57 Aligned_cols=16 Identities=31% Similarity=0.480 Sum_probs=12.3
Q ss_pred HHHHHhhcccccCcCC
Q 016781 99 GVWVVAHECGHHAFSD 114 (383)
Q Consensus 99 ~l~~l~Hda~H~s~~~ 114 (383)
.+..+.||.||+.|+-
T Consensus 78 ~~A~LlHDiGh~PFsH 93 (369)
T d2heka1 78 KLAGLLHDLGHPPFSH 93 (369)
T ss_dssp HHHHHTTTTTCCSSSS
T ss_pred HHHHHHhhcccchhhh
Confidence 3445889999998865
No 6
>d2o6ia1 a.211.1.1 (A:1-453) Hypothetical protein EF1143 {Enterococcus faecalis [TaxId: 1351]}
Probab=6.33 E-value=82 Score=27.95 Aligned_cols=14 Identities=29% Similarity=0.596 Sum_probs=10.8
Q ss_pred HHHhhcccccCcCC
Q 016781 101 WVVAHECGHHAFSD 114 (383)
Q Consensus 101 ~~l~Hda~H~s~~~ 114 (383)
..+.||-||+.++-
T Consensus 106 AaLlHDiGHgPfSH 119 (453)
T d2o6ia1 106 AALLHDVGHGPYSH 119 (453)
T ss_dssp HHHHTTTTCCTTHH
T ss_pred HHHHhccCcccccc
Confidence 34779999998753
No 7
>d2e9xb1 a.278.1.2 (B:62-173) DNA replication complex GINS protein PSF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.96 E-value=1.5e+02 Score=20.55 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=22.9
Q ss_pred hhhhhcCCCCcccHHHHHHHHHhhhhcccc
Q 016781 316 VAHHLFSTMPHYHAMEATKAIKPILGEYYQ 345 (383)
Q Consensus 316 ~eHHlfP~iP~y~Lp~~~~~l~~~~~~~~~ 345 (383)
.++.-|-.+|++++-++...+-+.+++.+.
T Consensus 18 ~~~~~f~~lP~~~~~Eia~~ll~~a~ddi~ 47 (112)
T d2e9xb1 18 RKEETFTPMPSPYYMELTKLLLNHASDNIP 47 (112)
T ss_dssp HHCSSCCCCSSTTHHHHHHHHHHHHGGGST
T ss_pred hcccccccCCcHHHHHHHHHHHHhcccCCC
Confidence 356778899998888888888877776543
No 8
>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.70 E-value=1e+02 Score=19.95 Aligned_cols=19 Identities=21% Similarity=0.607 Sum_probs=15.4
Q ss_pred CCCCCCCCHHHHHHhcCCC
Q 016781 25 PCSKPPFTLSQVKKAIPPH 43 (383)
Q Consensus 25 ~~~~~~~~~~~l~~~l~~~ 43 (383)
..+||=+|-.||++.|+++
T Consensus 18 A~~KpyVT~~dL~~~L~pe 36 (73)
T d1h8ba_ 18 ASDKPYILAEELRRELPPD 36 (73)
T ss_dssp TTSCSSBCHHHHHHHSCHH
T ss_pred hCCCCeeCHHHHHhhcCHH
Confidence 4678888999999988863
No 9
>d1kcfa1 a.140.2.1 (A:3-38) Mitochondrial resolvase ydc2 N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=4.94 E-value=2.5e+02 Score=14.54 Aligned_cols=29 Identities=21% Similarity=0.275 Sum_probs=23.4
Q ss_pred HHhhcccccCcCCCchhhHHHHHHHHhhc
Q 016781 102 VVAHECGHHAFSDYQWLDDTVGLILHSCL 130 (383)
Q Consensus 102 ~l~Hda~H~s~~~~~~~N~~lg~l~~~~~ 130 (383)
.++|-|---.++|+-+-.+.+-.+...|+
T Consensus 6 flqhickltglsrsgrkdellrrivdspi 34 (36)
T d1kcfa1 6 FLQHICKLTGLSRSGRKDELLRRIVDSPI 34 (36)
T ss_dssp HHHHHHHHTTCCCCSCTTHHHHHHHHCCC
T ss_pred HHHHHHHhhcccccccHHHHHHHHhcCCC
Confidence 36788877788888888888888888774
No 10
>d3cmna1 d.92.1.16 (A:43-391) Uncharacterized protein Caur0242 {Chloroflexus aurantiacus [TaxId: 1108]}
Probab=4.64 E-value=86 Score=26.79 Aligned_cols=25 Identities=24% Similarity=0.586 Sum_probs=20.0
Q ss_pred HHHHHhhcccccCcCC-CchhhHHHH
Q 016781 99 GVWVVAHECGHHAFSD-YQWLDDTVG 123 (383)
Q Consensus 99 ~l~~l~Hda~H~s~~~-~~~~N~~lg 123 (383)
.+|+..||+.|..+|. .+|+-+-+-
T Consensus 162 rl~lal~E~ah~~lF~~~pWLr~~~~ 187 (346)
T d3cmna1 162 RLWITLHEMTHAFEFEAYPWVRTYFR 187 (346)
T ss_dssp HHHHHHHHHHHHHHHHTSTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 5888999999999985 688765543
Done!