Query 016785
Match_columns 382
No_of_seqs 191 out of 1357
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 03:45:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016785.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016785hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lr7a1 g.3.11.3 (A:64-88) Dom 77.6 0.35 2.6E-05 26.8 0.9 23 14-36 1-23 (26)
2 d2heyr2 g.24.1.1 (R:143-166) T 26.0 9.8 0.00071 20.6 0.7 12 12-23 1-12 (26)
3 d1tdja2 d.58.18.2 (A:336-423) 16.2 14 0.00098 26.7 -0.1 13 331-345 5-17 (88)
4 d2e74g1 f.23.26.1 (G:9-35) Pet 15.4 60 0.0044 17.6 2.5 16 319-334 2-17 (27)
5 d1ewsa_ g.9.1.1 (A:) Alpha-def 13.5 21 0.0015 20.1 0.2 9 9-17 8-16 (32)
6 d1tdja3 d.58.18.2 (A:424-514) 9.2 24 0.0017 25.5 -0.7 13 331-345 12-24 (91)
7 d1bu2a2 a.74.1.1 (A:149-250) V 8.4 21 0.0015 25.3 -1.3 15 331-345 12-26 (102)
8 d1icaa_ g.3.7.4 (A:) Defensin 8.3 46 0.0033 20.2 0.5 10 14-23 1-10 (40)
9 d1ik7a_ a.77.1.2 (A:) Pelle de 7.8 1.1E+02 0.0082 19.5 2.3 28 346-373 11-40 (52)
10 d2v0fa1 d.76.2.1 (A:2629-2715) 6.8 32 0.0023 24.7 -1.0 25 40-68 38-62 (87)
No 1
>d1lr7a1 g.3.11.3 (A:64-88) Domain of follistatin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=77.64 E-value=0.35 Score=26.82 Aligned_cols=23 Identities=43% Similarity=0.611 Sum_probs=17.0
Q ss_pred ccccccccccchhhhhhccccce
Q 016785 14 ETCDLLDCKEGKAKKNWKKAKWH 36 (382)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~ 36 (382)
||||-.||+.+|+-|..++.+++
T Consensus 1 etcdnvdcgpgk~c~mnrrnkpr 23 (26)
T d1lr7a1 1 ETCENVDCGPGKKCRMNKKNKPR 23 (26)
T ss_dssp CCSTTCCCCTTEEEEECTTSCEE
T ss_pred CcccccccCCCccccccccCCCc
Confidence 79999999998776655554443
No 2
>d2heyr2 g.24.1.1 (R:143-166) Tumor necrosis factor receptor superfamily member 4, OX40L receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.03 E-value=9.8 Score=20.60 Aligned_cols=12 Identities=33% Similarity=0.952 Sum_probs=10.1
Q ss_pred cccccccccccc
Q 016785 12 PWETCDLLDCKE 23 (382)
Q Consensus 12 ~~~~~~~~~~~~ 23 (382)
||..|.|++...
T Consensus 1 pwtnctlagkht 12 (26)
T d2heyr2 1 PWTNCTLAGKHT 12 (26)
T ss_dssp ECCCTTTTTCCC
T ss_pred Ccccceeccccc
Confidence 899999998655
No 3
>d1tdja2 d.58.18.2 (A:336-423) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=16.23 E-value=14 Score=26.74 Aligned_cols=13 Identities=38% Similarity=0.881 Sum_probs=10.3
Q ss_pred HhhhcCCccCCCCcc
Q 016785 331 IYAMRVPERWKPGKF 345 (382)
Q Consensus 331 fYa~r~PER~~PG~F 345 (382)
+|+..+||| ||.|
T Consensus 5 l~~v~iPEr--pGaf 17 (88)
T d1tdja2 5 LLAVTIPEE--KGSF 17 (88)
T ss_dssp EEEEECCBS--SSCS
T ss_pred EEEEEcCCC--ccHH
Confidence 467789998 9975
No 4
>d2e74g1 f.23.26.1 (G:9-35) PetG subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=15.44 E-value=60 Score=17.58 Aligned_cols=16 Identities=38% Similarity=0.590 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHhhh
Q 016785 319 ILMGLFYGFGALIYAM 334 (382)
Q Consensus 319 ~~~~~~y~iGa~fYa~ 334 (382)
++|.++..+|..||+.
T Consensus 2 vlgli~~tl~glf~aa 17 (27)
T d2e74g1 2 VLGLVFATLGGLFYAA 17 (27)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred eeeehHHHHHHHHHHH
Confidence 3455666777777764
No 5
>d1ewsa_ g.9.1.1 (A:) Alpha-defensin rk-1 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=13.49 E-value=21 Score=20.11 Aligned_cols=9 Identities=56% Similarity=1.176 Sum_probs=6.6
Q ss_pred CCCcccccc
Q 016785 9 SVDPWETCD 17 (382)
Q Consensus 9 ~~~~~~~~~ 17 (382)
--||||.-|
T Consensus 8 ycdpwevid 16 (32)
T d1ewsa_ 8 YCDPWEVID 16 (32)
T ss_dssp SCCTTEEEE
T ss_pred ccChhheec
Confidence 469999755
No 6
>d1tdja3 d.58.18.2 (A:424-514) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=9.21 E-value=24 Score=25.52 Aligned_cols=13 Identities=38% Similarity=1.040 Sum_probs=9.8
Q ss_pred HhhhcCCccCCCCcc
Q 016785 331 IYAMRVPERWKPGKF 345 (382)
Q Consensus 331 fYa~r~PER~~PG~F 345 (382)
+|+..+||| ||.|
T Consensus 12 l~~v~iPEr--pGal 24 (91)
T d1tdja3 12 LYSFEFPES--PGAL 24 (91)
T ss_dssp EEEEECCCC--TTHH
T ss_pred EEEEECCCC--ccHH
Confidence 567789998 8853
No 7
>d1bu2a2 a.74.1.1 (A:149-250) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]}
Probab=8.39 E-value=21 Score=25.32 Aligned_cols=15 Identities=27% Similarity=0.552 Sum_probs=11.5
Q ss_pred HhhhcCCccCCCCcc
Q 016785 331 IYAMRVPERWKPGKF 345 (382)
Q Consensus 331 fYa~r~PER~~PG~F 345 (382)
-.+.|+||.++|.-|
T Consensus 12 c~alkipe~~wpql~ 26 (102)
T d1bu2a2 12 CNALKIPEDLWPQLY 26 (102)
T ss_dssp HHHTTCCTTSHHHHH
T ss_pred hhhccCcHHHhHHHH
Confidence 467899999988433
No 8
>d1icaa_ g.3.7.4 (A:) Defensin A {Flesh fly (Phormia terranovae) [TaxId: 34676]}
Probab=8.34 E-value=46 Score=20.21 Aligned_cols=10 Identities=50% Similarity=0.817 Sum_probs=6.5
Q ss_pred cccccccccc
Q 016785 14 ETCDLLDCKE 23 (382)
Q Consensus 14 ~~~~~~~~~~ 23 (382)
.||||++-..
T Consensus 1 aTCDllS~~~ 10 (40)
T d1icaa_ 1 ATCDLLSGTG 10 (40)
T ss_dssp CCCSCSSTTS
T ss_pred CceeecccCC
Confidence 3788887443
No 9
>d1ik7a_ a.77.1.2 (A:) Pelle death domain {Drosophila melanogaster [TaxId: 7227]}
Probab=7.77 E-value=1.1e+02 Score=19.46 Aligned_cols=28 Identities=11% Similarity=0.045 Sum_probs=23.5
Q ss_pred ccCCC--chHHHHHHHHHHHHHHHHHHHHH
Q 016785 346 DIAGH--SHQLFHVLVVAGAYTHYLDGLVY 373 (382)
Q Consensus 346 Di~G~--SHqifHi~Vv~g~~~h~~ai~~~ 373 (382)
++||+ .|.|--+|+++.-.-|+.|+...
T Consensus 11 ~~Wg~q~NHTi~eLF~ll~~mk~~~aM~ii 40 (52)
T d1ik7a_ 11 NIWGGQYNHTVQTLFALFKKLKLHNAMRLI 40 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 45665 79999999999999999998753
No 10
>d2v0fa1 d.76.2.1 (A:2629-2715) Chromodomain-helicase-DNA-binding protein 7, CHD7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.84 E-value=32 Score=24.73 Aligned_cols=25 Identities=20% Similarity=0.332 Sum_probs=15.4
Q ss_pred ccCCCcccccCCcccccccCCCCHHHHHH
Q 016785 40 YQKLPLYLRDNEYIVGYYRSEWPLKQILL 68 (382)
Q Consensus 40 ~~elP~~~~dN~yI~tGYR~~~s~~~cl~ 68 (382)
.++|..||++|| +|=..-.+.+|.+
T Consensus 38 ~~~L~~WL~~nP----~y~V~P~w~~~vk 62 (87)
T d2v0fa1 38 MKDLPRWLEENP----EFAVAPDWTDIVK 62 (87)
T ss_dssp GGGHHHHHHHCT----TEEECHHHHHHHH
T ss_pred HHHHHHHHHHCC----CceeCccHHHHHh
Confidence 457889999986 3433323455555
Done!