Query 016786
Match_columns 382
No_of_seqs 216 out of 387
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 02:48:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016786.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016786hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2234 Predicted UDP-galactos 99.9 2.9E-22 6.3E-27 196.3 28.3 294 49-356 21-325 (345)
2 PF06027 DUF914: Eukaryotic pr 99.9 5.9E-22 1.3E-26 196.2 26.5 325 36-377 7-333 (334)
3 KOG3912 Predicted integral mem 99.9 4.5E-22 9.8E-27 188.8 19.9 296 44-349 5-332 (372)
4 PF08449 UAA: UAA transporter 99.9 1E-20 2.3E-25 184.9 28.0 290 49-354 6-300 (303)
5 PF04142 Nuc_sug_transp: Nucle 99.9 1.5E-20 3.2E-25 179.3 20.4 221 109-341 14-243 (244)
6 TIGR00817 tpt Tpt phosphate/ph 99.9 3.4E-19 7.4E-24 173.6 27.7 265 68-351 26-293 (302)
7 PTZ00343 triose or hexose phos 99.8 1.5E-18 3.2E-23 173.4 30.9 293 42-351 48-348 (350)
8 PLN00411 nodulin MtN21 family 99.8 1.1E-17 2.5E-22 167.7 32.3 288 56-361 26-338 (358)
9 TIGR00950 2A78 Carboxylate/Ami 99.8 3.9E-16 8.4E-21 147.7 26.9 255 59-346 5-259 (260)
10 PRK11272 putative DMT superfam 99.7 6.4E-15 1.4E-19 143.2 30.8 278 38-349 3-283 (292)
11 PRK11453 O-acetylserine/cystei 99.7 7.9E-15 1.7E-19 143.0 29.6 266 56-352 17-288 (299)
12 KOG2765 Predicted membrane pro 99.7 1.9E-15 4.2E-20 148.9 18.9 306 34-359 6-398 (416)
13 PRK15430 putative chlorampheni 99.7 7.1E-14 1.5E-18 136.2 28.0 212 116-358 77-292 (296)
14 PRK10532 threonine and homoser 99.6 1.4E-12 3.1E-17 126.9 30.0 205 117-352 76-282 (293)
15 PRK11689 aromatic amino acid e 99.6 2.5E-13 5.5E-18 132.3 22.7 208 119-351 68-287 (295)
16 TIGR03340 phn_DUF6 phosphonate 99.6 1.5E-12 3.3E-17 125.8 24.8 213 115-348 66-280 (281)
17 KOG1443 Predicted integral mem 99.5 2.5E-12 5.5E-17 124.2 20.5 221 115-349 87-313 (349)
18 COG0697 RhaT Permeases of the 99.5 7.7E-11 1.7E-15 111.6 30.5 212 117-352 75-288 (292)
19 KOG1583 UDP-N-acetylglucosamin 99.4 6.3E-13 1.4E-17 126.7 11.8 223 123-349 75-312 (330)
20 KOG1441 Glucose-6-phosphate/ph 99.4 5.5E-13 1.2E-17 131.3 10.7 290 40-352 14-308 (316)
21 TIGR00776 RhaT RhaT L-rhamnose 99.4 3E-10 6.5E-15 110.9 26.7 221 109-349 56-286 (290)
22 KOG1582 UDP-galactose transpor 99.3 5.6E-11 1.2E-15 113.3 17.9 294 36-353 36-334 (367)
23 TIGR00688 rarD rarD protein. T 99.3 8.4E-10 1.8E-14 105.0 24.5 152 55-222 14-167 (256)
24 PF03151 TPT: Triose-phosphate 99.3 2.6E-11 5.7E-16 105.9 12.3 150 202-351 1-153 (153)
25 COG2962 RarD Predicted permeas 99.3 1.2E-09 2.6E-14 105.5 22.2 218 109-359 69-291 (293)
26 TIGR00803 nst UDP-galactose tr 99.1 9.8E-10 2.1E-14 102.7 14.0 214 120-348 7-221 (222)
27 KOG4510 Permease of the drug/m 99.0 1.6E-10 3.6E-15 110.0 4.6 195 123-344 109-318 (346)
28 KOG1580 UDP-galactose transpor 99.0 7E-09 1.5E-13 97.4 12.3 220 115-349 88-311 (337)
29 KOG4314 Predicted carbohydrate 98.9 7.9E-09 1.7E-13 94.9 8.8 213 118-353 59-278 (290)
30 KOG1444 Nucleotide-sugar trans 98.9 8.2E-07 1.8E-11 86.9 22.8 224 119-358 84-307 (314)
31 KOG1442 GDP-fucose transporter 98.8 3.2E-09 7E-14 101.5 4.8 219 121-360 115-336 (347)
32 PF13536 EmrE: Multidrug resis 98.8 2.8E-08 6E-13 83.6 9.2 70 117-187 39-109 (113)
33 PF00892 EamA: EamA-like trans 98.7 1.6E-07 3.6E-12 77.9 11.4 118 58-182 6-124 (126)
34 KOG1581 UDP-galactose transpor 98.7 5.7E-06 1.2E-10 80.6 22.5 260 71-352 49-314 (327)
35 COG5006 rhtA Threonine/homoser 98.5 2.2E-05 4.8E-10 74.9 19.8 260 42-347 15-278 (292)
36 PF06800 Sugar_transport: Suga 98.3 8.7E-05 1.9E-09 72.0 19.8 146 70-222 9-159 (269)
37 KOG2766 Predicted membrane pro 98.2 7.3E-08 1.6E-12 91.6 -3.1 248 69-349 44-297 (336)
38 PLN00411 nodulin MtN21 family 98.2 4.5E-05 9.7E-10 77.0 16.7 69 119-187 263-331 (358)
39 PF05653 Mg_trans_NIPA: Magnes 98.2 2.8E-05 6.1E-10 76.7 14.3 66 122-187 60-125 (300)
40 PRK15051 4-amino-4-deoxy-L-ara 98.2 1.4E-05 3.1E-10 67.5 10.4 65 120-184 45-109 (111)
41 TIGR00950 2A78 Carboxylate/Ami 98.1 0.00015 3.3E-09 68.4 16.1 117 56-179 141-259 (260)
42 COG2510 Predicted membrane pro 98.1 1.2E-05 2.6E-10 69.3 7.4 113 69-184 27-139 (140)
43 PF03151 TPT: Triose-phosphate 98.1 0.00014 3.1E-09 63.2 14.2 127 55-181 12-150 (153)
44 PRK10532 threonine and homoser 98.0 0.00033 7.2E-09 68.3 17.0 67 119-185 215-282 (293)
45 TIGR00776 RhaT RhaT L-rhamnose 97.9 0.00015 3.2E-09 70.9 13.4 109 71-185 176-289 (290)
46 COG5070 VRG4 Nucleotide-sugar 97.9 0.0003 6.6E-09 66.2 14.2 205 127-351 83-296 (309)
47 PRK11689 aromatic amino acid e 97.9 0.00037 8E-09 68.0 15.3 66 118-183 221-286 (295)
48 PRK11272 putative DMT superfam 97.7 0.0013 2.7E-08 64.1 16.0 64 122-185 223-286 (292)
49 TIGR03340 phn_DUF6 phosphonate 97.7 9.8E-05 2.1E-09 71.4 7.9 67 116-182 215-281 (281)
50 PRK15430 putative chlorampheni 97.6 0.0017 3.7E-08 63.4 15.4 69 115-183 216-284 (296)
51 TIGR00817 tpt Tpt phosphate/ph 97.5 0.00055 1.2E-08 66.7 10.1 61 124-184 233-293 (302)
52 PRK13499 rhamnose-proton sympo 97.4 0.021 4.4E-07 57.6 20.3 109 109-217 70-190 (345)
53 PRK11453 O-acetylserine/cystei 97.4 0.0073 1.6E-07 58.9 15.9 63 123-185 226-288 (299)
54 KOG2922 Uncharacterized conser 97.4 0.00057 1.2E-08 67.3 7.9 69 120-188 72-140 (335)
55 COG2076 EmrE Membrane transpor 97.3 0.0019 4.1E-08 54.2 9.4 64 121-184 39-103 (106)
56 PRK10452 multidrug efflux syst 97.3 0.002 4.4E-08 55.3 9.9 67 120-186 38-105 (120)
57 PRK02971 4-amino-4-deoxy-L-ara 97.2 0.002 4.3E-08 56.0 8.8 64 122-185 58-123 (129)
58 PRK10650 multidrug efflux syst 97.2 0.0029 6.4E-08 53.4 9.4 62 121-182 44-106 (109)
59 PRK11431 multidrug efflux syst 97.2 0.0034 7.3E-08 52.7 9.5 62 122-183 39-101 (105)
60 PF00892 EamA: EamA-like trans 97.1 0.0026 5.7E-08 52.3 8.4 49 303-351 78-126 (126)
61 PTZ00343 triose or hexose phos 97.0 0.021 4.6E-07 57.3 15.4 64 119-182 283-346 (350)
62 TIGR00688 rarD rarD protein. T 97.0 0.02 4.2E-07 54.4 13.8 138 202-351 3-142 (256)
63 PRK09541 emrE multidrug efflux 96.9 0.0068 1.5E-07 51.2 9.4 64 122-185 40-104 (110)
64 COG0697 RhaT Permeases of the 96.9 0.044 9.5E-07 51.6 15.7 71 115-185 217-288 (292)
65 COG2510 Predicted membrane pro 96.5 0.023 5E-07 49.3 9.2 129 203-348 5-136 (140)
66 PF13536 EmrE: Multidrug resis 96.3 0.057 1.2E-06 45.1 10.6 47 308-354 63-109 (113)
67 PRK13499 rhamnose-proton sympo 96.2 0.09 1.9E-06 53.0 13.4 116 69-185 206-342 (345)
68 TIGR00803 nst UDP-galactose tr 96.1 0.018 3.9E-07 53.6 7.5 62 119-180 159-220 (222)
69 PF00893 Multi_Drug_Res: Small 96.1 0.02 4.4E-07 46.6 6.7 54 121-174 38-92 (93)
70 COG5006 rhtA Threonine/homoser 95.9 0.036 7.7E-07 53.4 8.4 74 108-181 205-279 (292)
71 PF08449 UAA: UAA transporter 95.8 0.15 3.3E-06 49.9 12.9 128 52-183 164-296 (303)
72 COG2962 RarD Predicted permeas 95.7 0.16 3.4E-06 49.8 12.1 136 200-351 6-144 (293)
73 PF06800 Sugar_transport: Suga 95.5 0.21 4.6E-06 48.7 12.2 104 69-180 160-267 (269)
74 PF04657 DUF606: Protein of un 94.4 2 4.4E-05 37.6 14.3 104 72-181 29-138 (138)
75 COG4975 GlcU Putative glucose 94.4 0.012 2.6E-07 56.4 0.1 147 67-222 22-173 (288)
76 PF06027 DUF914: Eukaryotic pr 94.1 1 2.2E-05 45.3 13.3 117 67-186 191-307 (334)
77 PF10639 UPF0546: Uncharacteri 93.8 0.13 2.8E-06 43.8 5.3 63 120-182 49-112 (113)
78 PRK02971 4-amino-4-deoxy-L-ara 93.4 1.5 3.2E-05 38.1 11.4 33 317-349 86-120 (129)
79 PRK15051 4-amino-4-deoxy-L-ara 92.8 0.77 1.7E-05 38.6 8.5 35 314-348 72-106 (111)
80 PRK09541 emrE multidrug efflux 92.6 0.51 1.1E-05 39.9 7.1 35 315-349 67-101 (110)
81 PRK10452 multidrug efflux syst 92.1 0.57 1.2E-05 40.3 6.9 36 314-349 66-101 (120)
82 PF05653 Mg_trans_NIPA: Magnes 91.7 0.74 1.6E-05 45.5 8.1 39 313-351 84-122 (300)
83 PRK10650 multidrug efflux syst 91.3 1 2.3E-05 38.0 7.6 35 314-348 71-105 (109)
84 PF06379 RhaT: L-rhamnose-prot 91.1 5.2 0.00011 40.3 13.4 167 44-215 5-187 (344)
85 COG2076 EmrE Membrane transpor 90.4 0.82 1.8E-05 38.5 6.0 36 314-349 66-101 (106)
86 PRK11431 multidrug efflux syst 89.8 1.3 2.9E-05 37.1 6.9 36 314-349 65-100 (105)
87 PF06379 RhaT: L-rhamnose-prot 88.7 13 0.00027 37.6 13.9 151 35-186 168-342 (344)
88 PF04657 DUF606: Protein of un 87.1 20 0.00043 31.3 14.4 125 203-347 3-137 (138)
89 KOG1580 UDP-galactose transpor 87.0 1.4 3E-05 42.4 5.8 64 119-182 248-311 (337)
90 PF04142 Nuc_sug_transp: Nucle 82.7 26 0.00057 33.5 12.6 118 51-173 123-242 (244)
91 COG4975 GlcU Putative glucose 81.8 0.99 2.2E-05 43.6 2.3 104 73-184 178-285 (288)
92 KOG1623 Multitransmembrane pro 75.7 14 0.0003 35.7 8.1 89 127-221 55-148 (243)
93 KOG1441 Glucose-6-phosphate/ph 75.7 10 0.00023 37.9 7.5 63 120-182 243-305 (316)
94 PF00893 Multi_Drug_Res: Small 75.6 4.3 9.4E-05 32.9 4.1 27 316-342 67-93 (93)
95 KOG2765 Predicted membrane pro 71.4 32 0.0007 35.3 9.8 65 123-187 329-393 (416)
96 PF07857 DUF1632: CEO family ( 67.8 13 0.00029 36.0 6.1 22 332-353 115-136 (254)
97 COG0341 SecF Preprotein transl 67.2 1.1E+02 0.0024 30.5 12.5 136 161-340 129-272 (305)
98 KOG4510 Permease of the drug/m 66.1 0.99 2.2E-05 44.1 -2.0 47 311-357 129-175 (346)
99 COG3238 Uncharacterized protei 62.2 1.2E+02 0.0026 27.2 11.9 122 200-345 4-140 (150)
100 KOG2234 Predicted UDP-galactos 59.8 1.1E+02 0.0024 31.1 11.0 76 304-382 117-192 (345)
101 KOG1581 UDP-galactose transpor 59.7 39 0.00085 33.7 7.7 107 72-181 197-310 (327)
102 PF04342 DUF486: Protein of un 58.3 21 0.00045 30.1 4.7 40 306-345 63-102 (108)
103 PF10710 DUF2512: Protein of u 57.6 36 0.00079 29.8 6.4 58 303-360 56-114 (136)
104 PF04246 RseC_MucC: Positive r 57.0 26 0.00057 30.1 5.5 49 304-352 65-113 (135)
105 COG3169 Uncharacterized protei 53.3 46 0.001 27.8 5.9 46 302-347 66-111 (116)
106 PF08627 CRT-like: CRT-like; 51.2 44 0.00096 29.1 5.7 56 39-94 53-108 (130)
107 PRK13024 bifunctional preprote 49.2 2.8E+02 0.0061 31.1 13.2 17 244-260 631-647 (755)
108 KOG4783 Uncharacterized conser 48.8 56 0.0012 27.1 5.7 31 333-363 68-99 (102)
109 PRK15086 ethanolamine utilizat 47.7 3.3E+02 0.0072 28.0 14.3 43 133-175 171-216 (372)
110 KOG4314 Predicted carbohydrate 46.2 10 0.00022 35.8 1.1 44 308-351 82-125 (290)
111 COG3238 Uncharacterized protei 46.1 2.2E+02 0.0048 25.5 12.8 108 69-182 30-144 (150)
112 PRK01844 hypothetical protein; 44.0 33 0.00073 26.9 3.5 28 41-68 4-31 (72)
113 PF06570 DUF1129: Protein of u 43.2 2.7E+02 0.0059 25.7 12.1 16 151-166 188-203 (206)
114 PF15061 DUF4538: Domain of un 42.2 26 0.00057 26.3 2.6 42 333-374 7-56 (58)
115 KOG1583 UDP-N-acetylglucosamin 42.0 2E+02 0.0044 28.6 9.4 48 136-183 266-313 (330)
116 PF06609 TRI12: Fungal trichot 39.8 5.4E+02 0.012 28.2 17.9 21 162-182 377-397 (599)
117 COG5070 VRG4 Nucleotide-sugar 38.9 1.3E+02 0.0028 29.1 7.3 130 55-185 167-297 (309)
118 KOG4026 Uncharacterized conser 37.7 1.9E+02 0.0041 27.2 8.1 51 236-286 109-170 (207)
119 PF06912 DUF1275: Protein of u 37.4 3.2E+02 0.007 24.9 14.3 116 37-163 45-160 (209)
120 PRK11056 hypothetical protein; 37.2 71 0.0015 27.5 4.8 62 295-357 19-90 (120)
121 PRK12405 electron transport co 36.7 3.9E+02 0.0084 25.6 12.9 26 237-262 67-92 (231)
122 PRK00523 hypothetical protein; 36.3 52 0.0011 25.8 3.5 28 41-68 5-32 (72)
123 PF04342 DUF486: Protein of un 33.8 53 0.0011 27.7 3.4 29 153-181 77-105 (108)
124 PF07695 7TMR-DISM_7TM: 7TM di 33.2 3.3E+02 0.0072 23.8 13.5 20 74-93 63-82 (205)
125 PRK13023 bifunctional preprote 33.1 5.9E+02 0.013 28.7 12.5 28 244-271 632-662 (758)
126 PF07226 DUF1422: Protein of u 33.1 98 0.0021 26.5 5.0 54 295-349 19-79 (117)
127 PF05977 MFS_3: Transmembrane 32.7 6.3E+02 0.014 26.9 18.7 85 134-227 249-335 (524)
128 KOG1582 UDP-galactose transpor 32.3 4E+02 0.0086 26.6 9.6 51 136-186 284-334 (367)
129 PRK02237 hypothetical protein; 31.2 1E+02 0.0022 26.1 4.8 38 149-186 70-107 (109)
130 PRK09804 putative cryptic C4-d 31.2 6.6E+02 0.014 26.6 11.7 69 149-218 8-91 (455)
131 KOG2922 Uncharacterized conser 31.1 12 0.00026 37.5 -0.9 39 312-350 97-135 (335)
132 PF11293 DUF3094: Protein of u 30.5 80 0.0017 23.4 3.5 32 33-64 23-54 (55)
133 PRK13108 prolipoprotein diacyl 29.7 2.5E+02 0.0055 29.7 8.5 44 306-355 235-278 (460)
134 COG4858 Uncharacterized membra 29.0 3.6E+02 0.0078 25.3 8.3 48 65-114 117-167 (226)
135 PF02487 CLN3: CLN3 protein; 27.9 2.4E+02 0.0051 29.3 7.8 33 153-185 77-109 (402)
136 KOG4831 Unnamed protein [Funct 27.9 76 0.0016 27.0 3.4 55 127-181 67-122 (125)
137 PF05961 Chordopox_A13L: Chord 27.5 70 0.0015 24.8 2.9 19 335-353 6-25 (68)
138 PF10639 UPF0546: Uncharacteri 27.3 67 0.0014 27.4 3.1 40 308-347 71-110 (113)
139 COG4711 Predicted membrane pro 26.9 1.6E+02 0.0035 27.8 5.7 71 157-227 114-187 (217)
140 PF04971 Lysis_S: Lysis protei 26.6 95 0.002 24.1 3.5 21 339-359 42-62 (68)
141 PF02447 GntP_permease: GntP f 26.6 7.5E+02 0.016 25.9 11.3 47 312-358 151-200 (441)
142 TIGR00844 c_cpa1 na(+)/h(+) an 25.6 1E+03 0.023 27.1 13.5 30 326-355 351-381 (810)
143 PF02694 UPF0060: Uncharacteri 25.2 1.4E+02 0.003 25.3 4.5 37 150-186 69-105 (107)
144 PF10754 DUF2569: Protein of u 25.0 3E+02 0.0066 24.1 7.1 74 148-225 66-145 (149)
145 PF07857 DUF1632: CEO family ( 24.1 6.6E+02 0.014 24.3 13.0 143 73-226 27-208 (254)
146 PRK10489 enterobactin exporter 23.2 7.3E+02 0.016 24.5 23.9 20 332-351 379-398 (417)
147 PF13038 DUF3899: Domain of un 23.0 88 0.0019 25.0 3.0 21 334-354 5-25 (92)
148 KOG1444 Nucleotide-sugar trans 23.0 7.8E+02 0.017 24.7 11.6 36 317-352 115-150 (314)
149 PF14184 YrvL: Regulatory prot 22.7 3.7E+02 0.008 23.4 7.0 26 200-225 5-30 (132)
150 COG3169 Uncharacterized protei 21.5 1.9E+02 0.0041 24.3 4.6 30 153-182 84-113 (116)
151 COG3086 RseC Positive regulato 20.8 2.6E+02 0.0056 25.0 5.6 9 323-331 97-105 (150)
152 PRK06638 NADH:ubiquinone oxido 20.2 6.9E+02 0.015 23.0 11.1 34 320-353 133-166 (198)
No 1
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.91 E-value=2.9e-22 Score=196.31 Aligned_cols=294 Identities=17% Similarity=0.191 Sum_probs=219.6
Q ss_pred HHHHhhhhhHHHHHHHHHhcCCCchhhHHHHHHhhHHHHHHHHhhhccCC----CCC-CCCCC-h--hhHHHHHHHHHHH
Q 016786 49 VCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGS----RSA-NTTDP-K--ISTLVCLYVAFGL 120 (382)
Q Consensus 49 ~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~agfplll~~~~~~~~~~----~~~-~~~~~-~--~~~l~~~~~~~Gl 120 (382)
+.+.+=.++=+++.|+-...+|.+..-.|.+-.++.-.++.+.+...+.. ++. +...+ . -++...-...+.+
T Consensus 21 ~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~ 100 (345)
T KOG2234|consen 21 IVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPAL 100 (345)
T ss_pred HHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHH
Confidence 33444456667888888888877777777777788888887776654432 111 01111 0 1212222233456
Q ss_pred HHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCC--CCCCCch
Q 016786 121 LLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENT--SGVSKGN 198 (382)
Q Consensus 121 l~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p--~~~~~~~ 198 (382)
+++.||.++..++.|+|++||++..|.++.+||+|++++++||++++||.+++++++|++++.++..+..+ +..+..+
T Consensus 101 iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n 180 (345)
T KOG2234|consen 101 IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQN 180 (345)
T ss_pred HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccc
Confidence 67777767779999999999999999999999999999999999999999999999999999854332212 1345567
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccchhH
Q 016786 199 YVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSY 278 (382)
Q Consensus 199 ~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~~~y 278 (382)
..+|+...+.++.++|+ .+.++||++|+..-+.++ ..+.+++++.++.++++... |+..+. ..+|.+|+..
T Consensus 181 ~~~G~~avl~~c~~Sgf----AgvYfEkiLK~s~~s~wi-~NiqL~~~g~~f~~l~~~~~-d~~~i~--~~gff~G~s~- 251 (345)
T KOG2234|consen 181 PFLGLVAVLVACFLSGF----AGVYFEKILKGSNVSLWI-RNIQLYFFGILFNLLTILLQ-DGEAIN--EYGFFYGYSS- 251 (345)
T ss_pred hhhhHHHHHHHHHHHHH----HHHHHHHHHhcCCchHHH-HHHHHHHHHHHHHHHHHhhc-cccccc--cCCccccccH-
Confidence 89999999999999999 667788887766655555 56666889999999998776 566665 4566677654
Q ss_pred HHHHHHHHHHHHHHH-hhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhhccch
Q 016786 279 LMTLIWTAVTWQISS-VGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQHYLD 356 (382)
Q Consensus 279 ~l~lv~~av~wq~~~-vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~~~~~ 356 (382)
.+|..+..++.. +-+.-+.+|+++++++...++.+.++.++++.+|+-+++..-.+|..+++ .++++|+.+|.
T Consensus 252 ---~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi--~Si~lY~~~P~ 325 (345)
T KOG2234|consen 252 ---IVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVI--LSIFLYSLYPA 325 (345)
T ss_pred ---HHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHH--HHHHHhhcCCc
Confidence 667777666653 33444667999999999999999999999999999999999999999999 55666654433
No 2
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.90 E-value=5.9e-22 Score=196.22 Aligned_cols=325 Identities=17% Similarity=0.184 Sum_probs=211.6
Q ss_pred ccchhHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHH
Q 016786 36 KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLY 115 (382)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~ 115 (382)
+++|.|..+++-=++-++-.+.++.-..+-.. |=+.|.+|++..-.-..+...+..+.++.++ + -.+..++-...|
T Consensus 7 ~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~--~-~~~~~~~~~w~y 82 (334)
T PF06027_consen 7 FTRRFWIVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFK--K-WLKVLKRPWWKY 82 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccc--c-chhhcchhHHHH
Confidence 44555665555433333333333333333333 5578999998887665555444444332211 1 000111222335
Q ss_pred HHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCC
Q 016786 116 VAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVS 195 (382)
Q Consensus 116 ~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~ 195 (382)
+..+++-...|++...|++|+++++.+++.++-.+|++++|++++|+|+++.|+.|+++.+.|++++.+.|.....++.+
T Consensus 83 ~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~ 162 (334)
T PF06027_consen 83 FLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSS 162 (334)
T ss_pred HHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCC
Confidence 55678888888999999999999999999999999999999999999999999999999999999987776432222223
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccc
Q 016786 196 KGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGR 275 (382)
Q Consensus 196 ~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~ 275 (382)
..+...|++++++||++||++-++.|+..||. + ..|+..++++++.+++.+-+.+- |++++.. -.|.. +
T Consensus 163 ~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~----~---~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~--~~w~~-~ 231 (334)
T PF06027_consen 163 GSNPILGDLLALLGAILYAVSNVLEEKLVKKA----P---RVEFLGMLGLFGFIISGIQLAIL-ERSGIES--IHWTS-Q 231 (334)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHhcccC----C---HHHHHHHHHHHHHHHHHHHHHhe-ehhhhhc--cCCCh-h
Confidence 34578999999999999999888887666553 2 46788999999998888655443 3344421 11211 1
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhhccc
Q 016786 276 VSYLMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQHYL 355 (382)
Q Consensus 276 ~~y~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~~~~ 355 (382)
. ...++..++.--+.+..+--+...+|+.+-|+-.....|.+.+..+++||+++++..++|.++++.|+..|...+.+
T Consensus 232 ~--~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 232 V--IGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred h--HHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence 1 11112222211111111111233456666666444455788999999999999999999999999999999887655
Q ss_pred hhh--hhhhcccCcccccccCCcc
Q 016786 356 DDY--KSKTMENKSKANEVSGSGS 377 (382)
Q Consensus 356 ~~~--~~~~~~~~~~~~~~~~~~~ 377 (382)
+++ +++++++..++++..+++.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ 333 (334)
T PF06027_consen 310 EEEARRNERKQELEEGQDEDGPDT 333 (334)
T ss_pred ccccchhhcccccccccccccccc
Confidence 443 3334444455555555554
No 3
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.89 E-value=4.5e-22 Score=188.85 Aligned_cols=296 Identities=15% Similarity=0.200 Sum_probs=229.9
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHhc------CCCchhhHHHHHHhhHHHHHHHHhhhccCCCCC-------C----CCCC
Q 016786 44 VILYVVCLLVGQSAATLLGRLYYDK------GGNSKWMATFVQSAGFPILLPILCCFSNGSRSA-------N----TTDP 106 (382)
Q Consensus 44 ~~~~~~~~~~g~~~~~Ll~r~y~~~------gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~-------~----~~~~ 106 (382)
++++.+ |++.++.++++.|...+. |-|+|.+|++.++-|+-+|+..+++.+++..++ + ..+|
T Consensus 5 v~ls~i-mvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~p 83 (372)
T KOG3912|consen 5 VFLSLI-MVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSP 83 (372)
T ss_pred hhhhhh-hhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCC
Confidence 444444 555669999999998764 348999999999999999998777766542111 0 2346
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecC
Q 016786 107 KISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA 186 (382)
Q Consensus 107 ~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~ 186 (382)
+.++++..++.+++ ++..++| .|++++.+|.+++++..-++|+.+||.-+++++++.+||.|+.....|.++++..|
T Consensus 84 f~p~lfl~Pal~Di--~gsslm~-vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d 160 (372)
T KOG3912|consen 84 FNPVLFLPPALCDI--AGSSLMY-VGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLD 160 (372)
T ss_pred CCcceecChHHHHH--hhhHHHH-HHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeee
Confidence 77788888999998 7887888 99999999999999999999999999999999999999999999999999998764
Q ss_pred CC--CCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHH-HHHHh----cC
Q 016786 187 DS--ENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCV-VGLFA----SG 259 (382)
Q Consensus 187 ~~--~~p~~~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~-igl~~----~g 259 (382)
-. +.|- .....-..|+++++.|.+..|.+.+++|+..+|+ ...++|...|.++++..++. ++... .+
T Consensus 161 ~~~~~~p~-~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~-----nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~ 234 (372)
T KOG3912|consen 161 VHLVTDPY-TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS-----NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSG 234 (372)
T ss_pred cccccCCc-cccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc-----cCCHHHHhhhhhhHHHHHHHHHHHHHhheecC
Confidence 21 1121 1112346799999999999999999999888886 56789999999999944444 44322 33
Q ss_pred -Cccccchh-ccc----cc--ccchhHHHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcc
Q 016786 260 -EWKGLSKE-MNG----YG--EGRVSYLMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKM 331 (382)
Q Consensus 260 -~~~~i~~e-~~~----f~--~g~~~y~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~ 331 (382)
.+..-|+. .++ |. ++.....+++..+.++-..++...+.++++.|+.++.+...++.-+.|+++....||.+
T Consensus 235 ~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f 314 (372)
T KOG3912|consen 235 DSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYF 314 (372)
T ss_pred CcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHH
Confidence 12211111 111 11 22345556666666666666777777888999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 016786 332 NGLKAIAMLLAIWGFLSY 349 (382)
Q Consensus 332 ~~~kiig~~L~l~G~~~y 349 (382)
...|+.|.++.+.|...|
T Consensus 315 ~llqilGFliLi~Gi~lY 332 (372)
T KOG3912|consen 315 HLLQILGFLILIMGIILY 332 (372)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999888887
No 4
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.89 E-value=1e-20 Score=184.91 Aligned_cols=290 Identities=17% Similarity=0.220 Sum_probs=210.0
Q ss_pred HHHHhhhhhHHHHHHH-HHhcCCC-chhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHH
Q 016786 49 VCLLVGQSAATLLGRL-YYDKGGN-SKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDN 126 (382)
Q Consensus 49 ~~~~~g~~~~~Ll~r~-y~~~gg~-~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n 126 (382)
....++-+...++... ...+.++ .+|+-|++|.+--.+.-.++.....+ ++.+..| .++.+. .+++....+
T Consensus 6 ~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~----~~~~~~~~~ 78 (303)
T PF08449_consen 6 AGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF--PKSRKIP-LKKYAI----LSFLFFLAS 78 (303)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc--cCCCcCh-HHHHHH----HHHHHHHHH
Confidence 3344444444444444 4444444 69999999999888766555443321 1112223 334333 367777777
Q ss_pred HHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCC-CCCchhHHHHHH
Q 016786 127 MMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSG-VSKGNYVIGFLC 205 (382)
Q Consensus 127 ~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~-~~~~~~~iG~~l 205 (382)
.+-+.+++|+|.+++.+++++.++++++++++++|||++++++.++++.++|+++.+.++..+++.. ........|+++
T Consensus 79 ~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~l 158 (303)
T PF08449_consen 79 VLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIIL 158 (303)
T ss_pred HHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHH
Confidence 8888999999999999999999999999999999999999999999999999999887765443321 122223459999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHh--cCCccccchhcccccccchhHHHHHH
Q 016786 206 TLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFA--SGEWKGLSKEMNGYGEGRVSYLMTLI 283 (382)
Q Consensus 206 ~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~--~g~~~~i~~e~~~f~~g~~~y~l~lv 283 (382)
.+.+.++.|++....|+.++++ + ....|+..+..+++.+++.+.++. .+++.+- ..|-.........+.
T Consensus 159 l~~sl~~~a~~~~~qe~~~~~~-~----~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~----~~f~~~~p~~~~~l~ 229 (303)
T PF08449_consen 159 LLLSLLLDAFTGVYQEKLFKKY-G----KSPWELMFYTNLFSLPFLLILLFLLPTGEFRSA----IRFISAHPSVLLYLL 229 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-C----CcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH----HHHHHHhHHHHHHHH
Confidence 9999999999999999999987 2 234889999999999988877776 5554321 112111111112233
Q ss_pred HHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhhcc
Q 016786 284 WTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQHY 354 (382)
Q Consensus 284 ~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~~~ 354 (382)
...+.-.++..++.-++...|++..+++.++|.+++.++++++||+++++.+++|.++++.|...|.|.++
T Consensus 230 ~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~ 300 (303)
T PF08449_consen 230 LFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKK 300 (303)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence 33333333334444566778999999999999999999999999999999999999999999999888643
No 5
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.87 E-value=1.5e-20 Score=179.31 Aligned_cols=221 Identities=17% Similarity=0.221 Sum_probs=173.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCC
Q 016786 109 STLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADS 188 (382)
Q Consensus 109 ~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~ 188 (382)
+|....++.++++++.+|.+...+++|+|++++++++|+++++||+|+++++|||++++||.|++++++|+++++.++..
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 35566677888889999977779999999999999999999999999999999999999999999999999998766543
Q ss_pred CC--C--CC----CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCC
Q 016786 189 EN--T--SG----VSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGE 260 (382)
Q Consensus 189 ~~--p--~~----~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~ 260 (382)
++ + .+ .++.+...|++++++++.+.|+..+..|+.+|+- . ......++++++++.++.++..... |
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~----~-~s~~~~N~qL~~~gi~~~~~~~~~~-~ 167 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS----N-VSLWIQNMQLYLFGILFNLLALLLS-D 167 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc----c-hhHHHHHHHHHHHHHHHHHHHHhcc-c
Confidence 21 1 11 1234578999999999999999888776666653 2 2244467777888888888776554 4
Q ss_pred ccccchhcccccccchhHHHHHHHHHHHHHH-HHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHH
Q 016786 261 WKGLSKEMNGYGEGRVSYLMTLIWTAVTWQI-SSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAM 339 (382)
Q Consensus 261 ~~~i~~e~~~f~~g~~~y~l~lv~~av~wq~-~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~ 339 (382)
+.++.+ ++|.+|... .+|..+..|+ .++.+.-+.+++|++.+++...+.+.++.++++++||.+++..-.+|.
T Consensus 168 ~~~~~~--~g~f~G~~~----~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~ 241 (244)
T PF04142_consen 168 GSAISE--SGFFHGYSW----WVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGA 241 (244)
T ss_pred cccccc--CCchhhcch----HHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhe
Confidence 444432 445566543 4555555555 455566688899999999999999999999999999999999998887
Q ss_pred HH
Q 016786 340 LL 341 (382)
Q Consensus 340 ~L 341 (382)
.+
T Consensus 242 ~~ 243 (244)
T PF04142_consen 242 AL 243 (244)
T ss_pred ec
Confidence 64
No 6
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.86 E-value=3.4e-19 Score=173.55 Aligned_cols=265 Identities=16% Similarity=0.104 Sum_probs=173.8
Q ss_pred cCCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHhh
Q 016786 68 KGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCAT 147 (382)
Q Consensus 68 ~gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ss 147 (382)
++.+-|+..++.|.+.--+++.+......+++ ++..++.+...+..|++.+.++.+.+.|++|+++|.++++.++
T Consensus 26 ~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~ 100 (302)
T TIGR00817 26 NVFPYPYFKTLISLAVGSLYCLLSWSSGLPKR-----LKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAM 100 (302)
T ss_pred hhCChhHHHHHHHHHHHHHHHHHHHHhCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhc
Confidence 34577999999987643222222211111111 1122334444555688888888999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016786 148 QLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKV 227 (382)
Q Consensus 148 ql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv 227 (382)
+|+|+++++++++|||++++++.++++.++|+++.+.+ +. +....|+++.++|++++++|..+.|+..++
T Consensus 101 ~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~-~~--------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~- 170 (302)
T TIGR00817 101 EPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT-EL--------SFNWAGFLSAMISNITFVSRNIFSKKAMTI- 170 (302)
T ss_pred chHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC-cc--------cccHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence 99999999999999999999999999999999875322 11 124679999999999999988877654441
Q ss_pred hhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhccccc--cc-chhHHHHHHHHHHHHHHHHhhhhcceeeeh
Q 016786 228 IKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYG--EG-RVSYLMTLIWTAVTWQISSVGLLGLVFEVS 304 (382)
Q Consensus 228 ~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~--~g-~~~y~l~lv~~av~wq~~~vgvvGl~~~~s 304 (382)
.. .+.+++..|...++.++++...+..++.+..+.+..... .. ...+...+..........+..-.-....+|
T Consensus 171 ---~~-~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s 246 (302)
T TIGR00817 171 ---KS-LDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVS 246 (302)
T ss_pred ---CC-CCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 11 235667778777777766644443332222222211110 00 011111111111111111111111344678
Q ss_pred hhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHh
Q 016786 305 SLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIY 351 (382)
Q Consensus 305 sl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y 351 (382)
+...++...+.+.++.+++++++||++++.+++|.++++.|...|-+
T Consensus 247 a~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 247 PLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred chHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 88899998888778899999999999999999999999987766554
No 7
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.85 E-value=1.5e-18 Score=173.45 Aligned_cols=293 Identities=15% Similarity=0.119 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhcCCCchhhHHHHHHh-hHHHHHHHHhhhccCCCCCCCCCC-hhhHHHHHHHHHH
Q 016786 42 LRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSA-GFPILLPILCCFSNGSRSANTTDP-KISTLVCLYVAFG 119 (382)
Q Consensus 42 ~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~a-gfplll~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~G 119 (382)
+.+.+.++.-........+..|.-.+. -+.||..++.|.. ++.++.+... ...+++++-...+ .+++++. .|
T Consensus 48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~llp----~g 121 (350)
T PTZ00343 48 WKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIKSLKLFLKNFLP----QG 121 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHH----HH
Confidence 344445555555556666666655443 3459999999876 4554433322 2111111001111 1233333 35
Q ss_pred HHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCchh
Q 016786 120 LLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNY 199 (382)
Q Consensus 120 ll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~~ 199 (382)
++-...+.....|+++.++|.++++.++.|+|+++++++++|||++++++.++++.++|+.+...++. ...
T Consensus 122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~---------~~~ 192 (350)
T PTZ00343 122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL---------HFT 192 (350)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc---------hhH
Confidence 55444444455999999999999999999999999999999999999999999999999999753321 124
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHH-HHHhcCCccccchhc----cccccc
Q 016786 200 VIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVV-GLFASGEWKGLSKEM----NGYGEG 274 (382)
Q Consensus 200 ~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~i-gl~~~g~~~~i~~e~----~~f~~g 274 (382)
..|+++.++|++.+++|.++.|+..++...........++..+..+++.++++- ..+.++. ...... ..+..-
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~--~~~~~~~~~~~~~~~~ 270 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGK--KWVPVWTNYTANMTNY 270 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHhhhccccc
Confidence 679999999999999999999887765411100112333444445666666553 3333321 111100 011110
Q ss_pred chhHHH-HHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHh
Q 016786 275 RVSYLM-TLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIY 351 (382)
Q Consensus 275 ~~~y~l-~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y 351 (382)
...-.+ .++.+.+.+.+.+....-....+|++..++...++++++.++++++|||++++.+++|.++++.|...|-+
T Consensus 271 ~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~ 348 (350)
T PTZ00343 271 TKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSL 348 (350)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhh
Confidence 000001 12223333333332222234456889999999999889999999999999999999999999988877643
No 8
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.83 E-value=1.1e-17 Score=167.67 Aligned_cols=288 Identities=14% Similarity=0.121 Sum_probs=170.4
Q ss_pred hhHHHHHHHHHhcCCCchhhHHHHH-HhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 016786 56 SAATLLGRLYYDKGGNSKWMATFVQ-SAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLL 134 (382)
Q Consensus 56 ~~~~Ll~r~y~~~gg~~~w~~t~vq-~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ 134 (382)
.+-.++.|.-++ +|=++...+..- ..+..+++|..+..+++++. + +..+|.+......|++-...+.++..|++
T Consensus 26 ~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~---~-~~~~~~~~~l~l~g~~g~~~~~~~~~gl~ 100 (358)
T PLN00411 26 VGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL---P-PLSVSILSKIGLLGFLGSMYVITGYIGIE 100 (358)
T ss_pred HHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhccc---C-cchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344566676664 455554444444 34444444332322211111 1 11122223333346655445567779999
Q ss_pred cCchhHHHHHHhhhHHHHHHHHHHH------hcCccChhHHHHHHHHHHHHHhheecCCCC---------------C-CC
Q 016786 135 YLPVSTYSLLCATQLAFNAFFSFFL------NSQKFTPFIFNSLVLLTISATLLAVNADSE---------------N-TS 192 (382)
Q Consensus 135 ylp~St~sll~ssql~Ftaifs~li------lkek~t~~~i~svvLl~~G~vll~~~~~~~---------------~-p~ 192 (382)
|+|++.++++.+++|+|++++++++ +|||+++.++.|+++.++|+.++..+.+.. . +.
T Consensus 101 ~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~ 180 (358)
T PLN00411 101 YSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPL 180 (358)
T ss_pred hccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccccccccccc
Confidence 9999999999999999999999999 699999999999999999999874422110 0 01
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHH-HHHHhcCCccccchhcccc
Q 016786 193 GVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCV-VGLFASGEWKGLSKEMNGY 271 (382)
Q Consensus 193 ~~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~-igl~~~g~~~~i~~e~~~f 271 (382)
.....+..+|+.+.++|+++||+|..+.++..+|+ ........|.++++..++. .++..+++ +.+.....+
T Consensus 181 ~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~------~~~~~~t~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~ 252 (358)
T PLN00411 181 SSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY------PAAFTVSFLYTVCVSIVTSMIGLVVEKN--NPSVWIIHF 252 (358)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CcHhHHHHHHHHHHHHHHHHHHHHHccC--Ccccceecc
Confidence 11122346799999999999999999887766654 1123344555555544444 44544432 111000011
Q ss_pred ccc-chhHHHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHH
Q 016786 272 GEG-RVSYLMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYI 350 (382)
Q Consensus 272 ~~g-~~~y~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~ 350 (382)
... ....++.++ +.+.+.+.+-+ +...++..++....+.+.++.+++++++||++++.+++|.++++.|+....
T Consensus 253 ~~~~~~i~y~~i~-t~lay~lw~~~----v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~ 327 (358)
T PLN00411 253 DITLITIVTMAII-TSVYYVIHSWT----VRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM 327 (358)
T ss_pred chHHHHHHHHHHH-HHHHHHHHHHH----HhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 100 001111111 11222111111 122344556666666666779999999999999999999999998887776
Q ss_pred hhccchhhhhh
Q 016786 351 YQHYLDDYKSK 361 (382)
Q Consensus 351 y~~~~~~~~~~ 361 (382)
.++.+|.|.++
T Consensus 328 ~~~~~~~~~~~ 338 (358)
T PLN00411 328 WGKANEEKDQL 338 (358)
T ss_pred hhhhhhhhhcc
Confidence 65544444333
No 9
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.77 E-value=3.9e-16 Score=147.69 Aligned_cols=255 Identities=16% Similarity=0.129 Sum_probs=163.0
Q ss_pred HHHHHHHHhcCCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCch
Q 016786 59 TLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPV 138 (382)
Q Consensus 59 ~Ll~r~y~~~gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~ 138 (382)
....|...+++ -.++..++.....=++++.+++..+ ++ .++........++..+.++.+|.+|++|+|+
T Consensus 5 ~~~~k~~~~~~-~~~~~~~~~r~~~~~l~l~~~~~~~-~~---------~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 5 GVVIGQYLEGQ-VPLYFAVFRRLIFALLLLLPLLRRR-PP---------LKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred HHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHhc-cC---------HhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 34455555543 4555555555554344443433322 11 0111122233344557888888899999999
Q ss_pred hHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 016786 139 STYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLS 218 (382)
Q Consensus 139 St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~~~iG~~l~l~Aa~~~al~~~ 218 (382)
+..+++.+++|+|+++++.+++|||++++++.++++.++|+.++..+++ .+.+..|+++.+.|+++|+.+..
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~--------~~~~~~G~~~~l~a~~~~a~~~~ 145 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN--------LSINPAGLLLGLGSGISFALGTV 145 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc--------ccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999853321 11356799999999999999888
Q ss_pred HHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccchhHHHHHHHHHHHHHHHHhhhhc
Q 016786 219 LLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLG 298 (382)
Q Consensus 219 l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~~~y~l~lv~~av~wq~~~vgvvG 298 (382)
+.++..+++ + .....+..+..+++.+++..-....++.... +.+.+ ....++.++.+.+.+.+..-+
T Consensus 146 ~~k~~~~~~----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~a--- 212 (260)
T TIGR00950 146 LYKRLVKKE----G-PELLQFTGWVLLLGALLLLPFAWFLGPNPQA--LSLQW---GALLYLGLIGTALAYFLWNKG--- 212 (260)
T ss_pred HHhHHhhcC----C-chHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--chHHH---HHHHHHHHHHHHHHHHHHHHH---
Confidence 876555443 1 1112233344556655555333333321111 00000 001111233333333332222
Q ss_pred ceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Q 016786 299 LVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGF 346 (382)
Q Consensus 299 l~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~ 346 (382)
..+.+....+.+....++++.+++++++||++++.+++|.++++.|.
T Consensus 213 -~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 213 -LTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred -HhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 23456667888888888899999999999999999999999999774
No 10
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.74 E-value=6.4e-15 Score=143.22 Aligned_cols=278 Identities=13% Similarity=0.073 Sum_probs=172.8
Q ss_pred chhHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHH
Q 016786 38 YKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVA 117 (382)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 117 (382)
.|.-+-++...+.+.+-=..+.+..|.-.+ +-+|+..+......=-+++.+++..+.++ . . .+|.+.....
T Consensus 3 ~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~--~----~~~~~~~~~~ 73 (292)
T PRK11272 3 FRQLLPLFGALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHP-L--P----TLRQWLNAAL 73 (292)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCC-C--C----cHHHHHHHHH
Confidence 444555666677777777788899996555 45666666666654333333343322111 1 1 1223333444
Q ss_pred HHHHH-HHHHHHHHhhh-ccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCC
Q 016786 118 FGLLL-TGDNMMYSYGL-LYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVS 195 (382)
Q Consensus 118 ~Gll~-~~~n~Ly~~gl-~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~ 195 (382)
+|++. ...+.++.++. +++|++..+++..++|+|+++++.+ +|||++++++.++++.++|+.++..+++.
T Consensus 74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~------- 145 (292)
T PRK11272 74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL------- 145 (292)
T ss_pred HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc-------
Confidence 56654 34456667888 9999999999999999999999986 69999999999999999999887433211
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHH-HHHHhcCCccccchhccccccc
Q 016786 196 KGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCV-VGLFASGEWKGLSKEMNGYGEG 274 (382)
Q Consensus 196 ~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~-igl~~~g~~~~i~~e~~~f~~g 274 (382)
+....|.++.++|+++||+|.... ||..+++ ......+...++...+. .....+.++...+ +.+.+
T Consensus 146 -~~~~~G~l~~l~a~~~~a~~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--- 212 (292)
T PRK11272 146 -SGNPWGAILILIASASWAFGSVWS----SRLPLPV----GMMAGAAEMLAAGVVLLIASLLSGERLTALP-TLSGF--- 212 (292)
T ss_pred -ccchHHHHHHHHHHHHHHHHHHHH----HhcCCCc----chHHHHHHHHHHHHHHHHHHHHcCCcccccC-CHHHH---
Confidence 123579999999999999987766 4431111 12233344444444333 2222211111110 00111
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Q 016786 275 RVSYLMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSY 349 (382)
Q Consensus 275 ~~~y~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y 349 (382)
....++.++.+.+.+.....+ ..+.++-..++...+.++.+.+++++++||+++..+++|.++++.|....
T Consensus 213 ~~i~~l~i~~s~~~~~l~~~~----~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~ 283 (292)
T PRK11272 213 LALGYLAVFGSIIAISAYMYL----LRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV 283 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence 011122333344433333222 12345555777777777888999999999999999999999999777654
No 11
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.72 E-value=7.9e-15 Score=143.03 Aligned_cols=266 Identities=14% Similarity=0.172 Sum_probs=160.4
Q ss_pred hhHHHHHHHHHhcCCCchhhHHHHHHhh-HHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHH-HHHHHHHHhhh
Q 016786 56 SAATLLGRLYYDKGGNSKWMATFVQSAG-FPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLL-TGDNMMYSYGL 133 (382)
Q Consensus 56 ~~~~Ll~r~y~~~gg~~~w~~t~vq~ag-fplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~-~~~n~Ly~~gl 133 (382)
..+.+..|.-.++ -+|+..+...... ...+++ +. .+++ + + .+.+.. .|+.. ..+..++..++
T Consensus 17 g~~~~~~k~~~~~--~~p~~~~~~R~~~a~~~l~~-~~--~~~~-~-----~-~~~~~~----~g~~~~~~~~~~~~~~~ 80 (299)
T PRK11453 17 GLNFVVIKVGLHN--MPPLMLAGLRFMLVAFPAIF-FV--ARPK-V-----P-LNLLLG----YGLTISFGQFAFLFCAI 80 (299)
T ss_pred hhhHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHH-Hh--cCCC-C-----c-hHHHHH----HHHHHHHHHHHHHHHHH
Confidence 4555666765542 5677666666532 222222 22 1111 1 1 112222 24433 33444555888
Q ss_pred cc-CchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 016786 134 LY-LPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASAT 212 (382)
Q Consensus 134 ~y-lp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~~~iG~~l~l~Aa~~ 212 (382)
+| +|++..+++.+++|+++++++++++|||++++++.++++.++|+.++..++.++ ......|+++++.|+++
T Consensus 81 ~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~------~~~~~~G~~l~l~aal~ 154 (299)
T PRK11453 81 NFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG------QHVAMLGFMLTLAAAFS 154 (299)
T ss_pred HhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC------cchhHHHHHHHHHHHHH
Confidence 88 799999999999999999999999999999999999999999999874332111 11235799999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHH-HHHHhcCCccccchhcccccccch--hHHHHHHHHHHHH
Q 016786 213 YSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCV-VGLFASGEWKGLSKEMNGYGEGRV--SYLMTLIWTAVTW 289 (382)
Q Consensus 213 ~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~-igl~~~g~~~~i~~e~~~f~~g~~--~y~l~lv~~av~w 289 (382)
|++|..+.++..++. .....+.++.+..+++..+.. .+...+++. ....+...+....+ .-++.++.+++.+
T Consensus 155 ~a~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~i~~t~~~~ 229 (299)
T PRK11453 155 WACGNIFNKKIMSHS----TRPAVMSLVVWSALIPIIPFFVASLILDGSA-TMIHSLVTIDMTTILSLMYLAFVATIVGY 229 (299)
T ss_pred HHHHHHHHHHHhccc----CccchhHHHHHHHHHHHHHHHHHHHHhcCch-hhhhhhccCCHHHHHHHHHHHHHHHHHHH
Confidence 999999887654432 223344456666666554444 333333321 11110011110000 1112233333333
Q ss_pred HHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhh
Q 016786 290 QISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQ 352 (382)
Q Consensus 290 q~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~ 352 (382)
.+..-++- ..++-.++.+..+.+.++.+++++++||+++..+++|.++++.|.....++
T Consensus 230 ~l~~~~l~----~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 230 GIWGTLLG----RYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHH----hCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 33222211 112334556666666677999999999999999999999999888766553
No 12
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.68 E-value=1.9e-15 Score=148.89 Aligned_cols=306 Identities=17% Similarity=0.228 Sum_probs=212.1
Q ss_pred hcccchhHHHHHHHHHHHHhhhhhHHHHHHHHHhcC-CCchhhHHHHHHhhHHHHHHHHhhh----c----c-CCCCC--
Q 016786 34 KLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKG-GNSKWMATFVQSAGFPILLPILCCF----S----N-GSRSA-- 101 (382)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~g-g~~~w~~t~vq~agfplll~~~~~~----~----~-~~~~~-- 101 (382)
..++|| |.+=++..+++.+-=.+++=|.+.-|+++ -+||++.|++.++-|.+.+|++.+- + + +++++
T Consensus 6 ~~~~~r-~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~ 84 (416)
T KOG2765|consen 6 FTKRWR-WTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAI 84 (416)
T ss_pred hhhhhH-HHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhh
Confidence 445566 44444445555556667777777777764 4799999999999999999986621 1 1 00000
Q ss_pred ----------------------------------C-CC-------------C---C-hhh------------HHHHHHHH
Q 016786 102 ----------------------------------N-TT-------------D---P-KIS------------TLVCLYVA 117 (382)
Q Consensus 102 ----------------------------------~-~~-------------~---~-~~~------------~l~~~~~~ 117 (382)
. ++ + + ..| +.+-+...
T Consensus 85 ~~e~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~ 164 (416)
T KOG2765|consen 85 MEEADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLF 164 (416)
T ss_pred hhhhhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHH
Confidence 0 00 0 0 012 45666777
Q ss_pred HHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCc
Q 016786 118 FGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKG 197 (382)
Q Consensus 118 ~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~ 197 (382)
...+..+.|+.|+.|+.|+.++..+++.++.-+||..++.++..||||...++++.+.+.|++++..++..+ .++....
T Consensus 165 fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~-~~~~~a~ 243 (416)
T KOG2765|consen 165 FCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ-NSDLPAS 243 (416)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc-cccCCcc
Confidence 889999999999999999999999999999999999999999999999999999999999999987765432 2233445
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHH---HHhcCCc--c--ccchhccc
Q 016786 198 NYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVG---LFASGEW--K--GLSKEMNG 270 (382)
Q Consensus 198 ~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~ig---l~~~g~~--~--~i~~e~~~ 270 (382)
+..+|.++++.+|++||+|..+- ||-..++. .-+++|.+.++++..-+++. +++-.-+ + ++|.
T Consensus 244 ~~llG~llaL~sA~~YavY~vll----k~~~~~eg--~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~---- 313 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLL----KRKIGDEG--ERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPS---- 313 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHH----Hhhccccc--ccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCC----
Confidence 67899999999999999999887 33222221 24557776666664444332 2221111 1 1221
Q ss_pred ccccchhHHHHHHHHHH---HHHH-HHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Q 016786 271 YGEGRVSYLMTLIWTAV---TWQI-SSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGF 346 (382)
Q Consensus 271 f~~g~~~y~l~lv~~av---~wq~-~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~ 346 (382)
-.+........++.+.+ .|.. +.+ +|++.+.+-.++-+|++.++-+++=|.++++..++|.+.++.||
T Consensus 314 ~~q~~~vv~~~ligtvvSDylW~~a~~l--------Ts~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~F 385 (416)
T KOG2765|consen 314 STQFSLVVFNNLIGTVVSDYLWAKAVLL--------TSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGF 385 (416)
T ss_pred CceeEeeeHhhHHHHHHHHHHHHHHHHh--------ccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 11111111112444443 4554 223 48888888899999999999999999999999999999999999
Q ss_pred HHHHhhccchhhh
Q 016786 347 LSYIYQHYLDDYK 359 (382)
Q Consensus 347 ~~y~y~~~~~~~~ 359 (382)
....|.....+++
T Consensus 386 v~vn~~~~~~~~~ 398 (416)
T KOG2765|consen 386 VIVNISSENSKKD 398 (416)
T ss_pred hheeccccccccc
Confidence 8887765554443
No 13
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.67 E-value=7.1e-14 Score=136.23 Aligned_cols=212 Identities=11% Similarity=0.113 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCC
Q 016786 116 VAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVS 195 (382)
Q Consensus 116 ~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~ 195 (382)
...++..+.++.+|.+|++++|++..+++..+.|+|+++++++++|||++++++.++++.++|++++. .++++
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~-~~~~~------ 149 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL-WTFGS------ 149 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH-HHcCC------
Confidence 34566678888999999999999999999999999999999999999999999999999999999873 22211
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccc
Q 016786 196 KGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGR 275 (382)
Q Consensus 196 ~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~ 275 (382)
. .++.++|+++||+|..+.|+.. +++.. ..+....+...++.+.. ... ..+ . . ..+....
T Consensus 150 ---~---~~~~l~aa~~~a~~~i~~r~~~----~~~~~-~~~~~~~~~~~~~~~~~-~~~--~~~-~-~----~~~~~~~ 209 (296)
T PRK15430 150 ---L---PIIALGLAFSFAFYGLVRKKIA----VEAQT-GMLIETMWLLPVAAIYL-FAI--ADS-S-T----SHMGQNP 209 (296)
T ss_pred ---c---cHHHHHHHHHHHHHHHHHHhcC----CCCch-hHHHHHHHHHHHHHHHH-HHH--ccC-C-c----ccccCCc
Confidence 0 1457778999999887664321 11111 11112222222222211 111 111 1 0 0011101
Q ss_pred h---h-HHHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHh
Q 016786 276 V---S-YLMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIY 351 (382)
Q Consensus 276 ~---~-y~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y 351 (382)
. . +++..+.+.+.+.+...+ ....++-..+....+.++++.+++++++||++++.+++|+++++.|++..+.
T Consensus 210 ~~~~~~~~~~g~~t~i~~~~~~~a----~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 210 MSLNLLLIAAGIVTTVPLLCFTAA----ATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 1 111111222222221111 2234555677778888888899999999999999999999999999999987
Q ss_pred hccchhh
Q 016786 352 QHYLDDY 358 (382)
Q Consensus 352 ~~~~~~~ 358 (382)
+.-...|
T Consensus 286 ~~~~~~~ 292 (296)
T PRK15430 286 DAIYTQR 292 (296)
T ss_pred HHHHHhh
Confidence 6544433
No 14
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.61 E-value=1.4e-12 Score=126.95 Aligned_cols=205 Identities=15% Similarity=0.150 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCC
Q 016786 117 AFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSK 196 (382)
Q Consensus 117 ~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~ 196 (382)
..|+..+..+.++.++++|+|++..+++..++|+|+++++. ||.++.+ .+.+.++|+.++...+. + .+
T Consensus 76 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~~--~~~i~~~Gv~li~~~~~-~-----~~ 143 (293)
T PRK10532 76 FYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDFV--WVVLAVLGLWFLLPLGQ-D-----VS 143 (293)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHHH--HHHHHHHHHheeeecCC-C-----cc
Confidence 44677788888888999999999999999999999998873 5655544 46677899887632211 1 11
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccch
Q 016786 197 GNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRV 276 (382)
Q Consensus 197 ~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~~ 276 (382)
.....|.++.++|+++|+.|..+.++..++. + ...+ .+..+++..++....+..+. ... +....+
T Consensus 144 ~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~----~---~~~~-~~~~~~~~~~l~~~~~~~~~--~~~-----~~~~~~ 208 (293)
T PRK10532 144 HVDLTGAALALGAGACWAIYILSGQRAGAEH----G---PATV-AIGSLIAALIFVPIGALQAG--EAL-----WHWSIL 208 (293)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHhccC----C---chHH-HHHHHHHHHHHHHHHHHccC--ccc-----CCHHHH
Confidence 1246799999999999999888886654433 1 1222 23344554444422222211 010 110001
Q ss_pred --hHHHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhh
Q 016786 277 --SYLMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQ 352 (382)
Q Consensus 277 --~y~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~ 352 (382)
..++.++.+.+.|.+...+ ..+.++-.++....+.++.+.+++++++||++++.+++|.++++.|...+...
T Consensus 209 ~~~l~lgv~~t~~~~~l~~~~----~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 209 PLGLAVAILSTALPYSLEMIA----LTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 1233444444444443322 12345666777788888888999999999999999999999999888877543
No 15
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.59 E-value=2.5e-13 Score=132.31 Aligned_cols=208 Identities=9% Similarity=0.053 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHhhhc----cCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCC-
Q 016786 119 GLLLTGDNMMYSYGLL----YLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSG- 193 (382)
Q Consensus 119 Gll~~~~n~Ly~~gl~----ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~- 193 (382)
++..+..+.++..|+. ++|++..+++.+++|+|+++++++++|||++++++.++++.++|++++..++.+....+
T Consensus 68 ~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 147 (295)
T PRK11689 68 GLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAEL 147 (295)
T ss_pred hHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhh
Confidence 4444555555556654 47888899999999999999999999999999999999999999998843321110000
Q ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhccccc
Q 016786 194 -VSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYG 272 (382)
Q Consensus 194 -~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~ 272 (382)
.+......|+++.++|+++|++|..+.|+..++. . .+.+.. ..+.+++......+++. .. .+.
T Consensus 148 ~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~----~---~~~~~~---~~~~~~l~~~~~~~~~~-~~-----~~~ 211 (295)
T PRK11689 148 INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK----N---GITLFF---ILTALALWIKYFLSPQP-AM-----VFS 211 (295)
T ss_pred hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC----C---chhHHH---HHHHHHHHHHHHHhcCc-cc-----cCC
Confidence 0111245799999999999999888886643332 1 121211 12222222222223221 11 111
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhhhccee------eehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Q 016786 273 EGRVSYLMTLIWTAVTWQISSVGLLGLVF------EVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGF 346 (382)
Q Consensus 273 ~g~~~y~l~lv~~av~wq~~~vgvvGl~~------~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~ 346 (382)
. . .|..+.+.. ..+..+... ..++...+....+.++++.+++++++||+++..+++|+++++.|.
T Consensus 212 ~-~-------~~~~l~~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv 282 (295)
T PRK11689 212 L-P-------AIIKLLLAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGS 282 (295)
T ss_pred H-H-------HHHHHHHHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhH
Confidence 0 0 111111111 112222222 235556777777777788999999999999999999999999887
Q ss_pred HHHHh
Q 016786 347 LSYIY 351 (382)
Q Consensus 347 ~~y~y 351 (382)
.....
T Consensus 283 ~~~~~ 287 (295)
T PRK11689 283 LLCWL 287 (295)
T ss_pred HHHhh
Confidence 66643
No 16
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.56 E-value=1.5e-12 Score=125.76 Aligned_cols=213 Identities=9% Similarity=0.067 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCC
Q 016786 115 YVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGV 194 (382)
Q Consensus 115 ~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~ 194 (382)
.+..|+..+..+.++..|+++.|++..+.+..++++++++++++++|||++++++.|+++.+.|+.++..++.. .
T Consensus 66 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~--~--- 140 (281)
T TIGR03340 66 LAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA--Q--- 140 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc--c---
Confidence 34456666777788889999999999999999999999999999999999999999999999999987543211 1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHH-HHHHHHHHHhcCCccccchhcccccc
Q 016786 195 SKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVA-TCGCVVGLFASGEWKGLSKEMNGYGE 273 (382)
Q Consensus 195 ~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a-~~~~~igl~~~g~~~~i~~e~~~f~~ 273 (382)
....|+.+.+.++++|++|..+.++..++. .+.........+..+.. .++..... ..++ ..... ...
T Consensus 141 ---~~~~g~~~~l~aal~~a~~~i~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~----~~~ 208 (281)
T TIGR03340 141 ---HRRKAYAWALAAALGTAIYSLSDKAAALGV---PAFYSALGYLGIGFLAMGWPFLLLYL-KRHG-RSMFP----YAR 208 (281)
T ss_pred ---cchhHHHHHHHHHHHHHHhhhhccccccch---hcccccHHHHHHHHHHHHHHHHHHHH-HHhc-cchhh----hHH
Confidence 123577889999999999888664432222 01111111111111111 11111111 1111 11100 000
Q ss_pred cch-hHHHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Q 016786 274 GRV-SYLMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLS 348 (382)
Q Consensus 274 g~~-~y~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~ 348 (382)
... .-++..+.+.+.+.+...++-. .+.-..+....+.++++.+++++++||+++..+++|+++++.|...
T Consensus 209 ~~~~~~~~~~~~s~l~~~l~~~al~~----~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 209 QILPSATLGGLMIGGAYALVLWAMTR----LPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh----CCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 001 1112233333333332222110 1111123334445567799999999999999999999999988753
No 17
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.50 E-value=2.5e-12 Score=124.16 Aligned_cols=221 Identities=18% Similarity=0.205 Sum_probs=165.6
Q ss_pred HHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCC
Q 016786 115 YVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGV 194 (382)
Q Consensus 115 ~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~ 194 (382)
.+.+|+..+.|--+-++++.|.|.|.|++..++.++|..+|+.++--||+++.-...+.+..+|+.+..+.+.
T Consensus 87 ~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT------- 159 (349)
T KOG1443|consen 87 LAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST------- 159 (349)
T ss_pred hhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc-------
Confidence 3456888899999999999999999999999999999999999999999999999999888888888766632
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchh-cccc
Q 016786 195 SKGNYVIGFLCTLGASATYSLYLSLLQLSFEKV--IKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKE-MNGY 271 (382)
Q Consensus 195 ~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv--~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e-~~~f 271 (382)
+-...|+.++++|+++.|+-+++.|...+|- .+++++.....+|-|+++ .+...++.+||....+..+ .+.+
T Consensus 160 --qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~---~Ll~~~l~fEG~~~~~~s~~f~~~ 234 (349)
T KOG1443|consen 160 --QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSI---GLLPLSLLFEGLHLITSSSIFRFQ 234 (349)
T ss_pred --ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHH---HHHHHHHHHcccccchhhhHHHhc
Confidence 1357899999999999999999999999986 255677777777777764 4445777788864433222 1122
Q ss_pred cccchhHHHHHHHHHHHH-HHHHhh--hhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Q 016786 272 GEGRVSYLMTLIWTAVTW-QISSVG--LLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLS 348 (382)
Q Consensus 272 ~~g~~~y~l~lv~~av~w-q~~~vg--vvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~ 348 (382)
..+. .+..+.-....- .++.+. -.-+...+++++.++.--.+-..+.++|.+..+|.++.....|+.+++.|...
T Consensus 235 d~~~--~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~ 312 (349)
T KOG1443|consen 235 DTGL--ILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILL 312 (349)
T ss_pred CccH--HHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHH
Confidence 2221 111111111111 111111 11233357888888888888888999999999999999999999999999998
Q ss_pred H
Q 016786 349 Y 349 (382)
Q Consensus 349 y 349 (382)
|
T Consensus 313 ~ 313 (349)
T KOG1443|consen 313 H 313 (349)
T ss_pred h
Confidence 8
No 18
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.50 E-value=7.7e-11 Score=111.64 Aligned_cols=212 Identities=14% Similarity=0.168 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHH-HHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCC
Q 016786 117 AFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSF-FLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVS 195 (382)
Q Consensus 117 ~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~-lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~ 195 (382)
..++..+..+.+|..+++|+|++..+++.++.|+|+++++. +++|||+++.++.++++.++|+.++...+..+ .
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~-----~ 149 (292)
T COG0697 75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG-----G 149 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc-----h
Confidence 34556677778898999999999999999999999999996 77799999999999999999999985553321 0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHH-HHHHHHHHHHHHHHHhcCCccccchhccccccc
Q 016786 196 KGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQI-YSSFVATCGCVVGLFASGEWKGLSKEMNGYGEG 274 (382)
Q Consensus 196 ~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~-~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g 274 (382)
.. +..|+++.+.+++.++++....+... +. . ...+.. +..+ ............ +.. .+. .+..-
T Consensus 150 ~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~----~---~~~~~~~~~~~-~~~~~~~~~~~~-~~~-~~~---~~~~~ 214 (292)
T COG0697 150 IL-SLLGLLLALAAALLWALYTALVKRLS-RL----G---PVTLALLLQLL-LALLLLLLFFLS-GFG-API---LSRAW 214 (292)
T ss_pred hH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC----C---hHHHHHHHHHH-HHHHHHHHHHhc-ccc-ccC---CHHHH
Confidence 01 57899999999999999777775444 22 1 111111 1111 111111111111 111 100 01000
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhh
Q 016786 275 RVSYLMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQ 352 (382)
Q Consensus 275 ~~~y~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~ 352 (382)
...-++.++.+.+.+.+..-+ ....+....+.+....++.+.+++++++||+++..+++|..+++.|.....+.
T Consensus 215 ~~~~~~g~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 215 LLLLYLGVFSTGLAYLLWYYA----LRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 000000111111111111111 00112222333334444455677999999999999999999999888877664
No 19
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.45 E-value=6.3e-13 Score=126.69 Aligned_cols=223 Identities=16% Similarity=0.198 Sum_probs=163.8
Q ss_pred HHHHHHHHhhhcc-CchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCC-C-----CC--
Q 016786 123 TGDNMMYSYGLLY-LPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSEN-T-----SG-- 193 (382)
Q Consensus 123 ~~~n~Ly~~gl~y-lp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~-p-----~~-- 193 (382)
...|.+-++++++ +|.-.+-++++..++-|++.+++++|+|++.+|+.|+++.++|+++-.+.++.|- . +.
T Consensus 75 F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~ 154 (330)
T KOG1583|consen 75 FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGS 154 (330)
T ss_pred eeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCc
Confidence 3444666788887 7777899999999999999999999999999999999999999998654433221 0 11
Q ss_pred --CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc----cceEEehhHHHHHHHHHHHHHHHHHhcCCccccchh
Q 016786 194 --VSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKE----TFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKE 267 (382)
Q Consensus 194 --~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~----~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e 267 (382)
.+...-.+|+.+...|.++.|.....-|..|||+.|+. .|+|.+.++.+.-+-.-+..-...+..+|--.+|.
T Consensus 155 ~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~- 233 (330)
T KOG1583|consen 155 AQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPL- 233 (330)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccc-
Confidence 11123468999999999999999999999999997653 45555554444433222222222222211001111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Q 016786 268 MNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFL 347 (382)
Q Consensus 268 ~~~f~~g~~~y~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~ 347 (382)
-++. -++-+.-+..+.+..-.|.-|+--+...+++|+.+++.++|.-++.+++++.|.++++++..+|..++..|..
T Consensus 234 -~g~~--vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~ 310 (330)
T KOG1583|consen 234 -LGFK--VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTL 310 (330)
T ss_pred -cCcc--ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHH
Confidence 0111 1222334777778888888999999999999999999999999999999999999999999999999998888
Q ss_pred HH
Q 016786 348 SY 349 (382)
Q Consensus 348 ~y 349 (382)
.|
T Consensus 311 ~f 312 (330)
T KOG1583|consen 311 LF 312 (330)
T ss_pred HH
Confidence 87
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.43 E-value=5.5e-13 Score=131.29 Aligned_cols=290 Identities=17% Similarity=0.205 Sum_probs=188.0
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHHHhc--CCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHH
Q 016786 40 WWLRVILYVVCLLVGQSAATLLGRLYYDK--GGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVA 117 (382)
Q Consensus 40 ~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~--gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 117 (382)
++....+++.+=.+. ..+..+.+.|=-+ |.+-||.-|.++++-=-+.....-..+..++++.+++..+++++.+
T Consensus 14 ~~~~~~~~~~~w~~~-~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl--- 89 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVL-SVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPL--- 89 (316)
T ss_pred hhHHHHHHHHHHhhh-heeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHH---
Confidence 345555555554444 4445555555444 8899999999965544443322222232222222222334555555
Q ss_pred HHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCc
Q 016786 118 FGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKG 197 (382)
Q Consensus 118 ~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~ 197 (382)
|+..+..+.+-+.++.|.|+|.++.+-++.|+|+.++++++.+|++++..+.+++....|+++-...+. +
T Consensus 90 -~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~---------~ 159 (316)
T KOG1441|consen 90 -GLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL---------S 159 (316)
T ss_pred -HHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc---------c
Confidence 777788888888999999999999999999999999999999999999999999999999888655432 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHH--hcCCccccchhcccccccc
Q 016786 198 NYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLF--ASGEWKGLSKEMNGYGEGR 275 (382)
Q Consensus 198 ~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~--~~g~~~~i~~e~~~f~~g~ 275 (382)
-+..|++.++++-+.++++.++.+...++- + .-.+.+++..+++-.+.+.+++-.. .+++ ... .+..+.
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~--~-~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~-~~~-----~~~~~~ 230 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSK--G-ESLNSMNLLYYTAPISLIFLLIPFLDYVEGN-KFV-----GFLTAP 230 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhcc--c-cccCchHHHHHhhhHHHHHHhcchHhhhccc-cee-----eeeccc
Confidence 368999999999999999888887666421 1 1234666666666666555553221 1221 110 011111
Q ss_pred hhH-HHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhh
Q 016786 276 VSY-LMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQ 352 (382)
Q Consensus 276 ~~y-~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~ 352 (382)
+.+ +..++.+.+..-+.+....=++-.+|+++=++....+-.++.+.++++|+|+.++.++.|.++++.|...|-+.
T Consensus 231 ~~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~ 308 (316)
T KOG1441|consen 231 WFVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRA 308 (316)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHH
Confidence 111 11111111211112333333334567788777777777788888999999999999999999999777665543
No 21
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.39 E-value=3e-10 Score=110.89 Aligned_cols=221 Identities=16% Similarity=0.165 Sum_probs=150.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHh-hhHHHHHHHHHHHhcCccChhH----HHHHHHHHHHHHhhe
Q 016786 109 STLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCA-TQLAFNAFFSFFLNSQKFTPFI----FNSLVLLTISATLLA 183 (382)
Q Consensus 109 ~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~s-sql~Ftaifs~lilkek~t~~~----i~svvLl~~G~vll~ 183 (382)
++.+...+..|++.+..|.+|..+.+|+.+|+...+.+ .|++++++++.+++|||.++++ +.++++.++|+++++
T Consensus 56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~ 135 (290)
T TIGR00776 56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS 135 (290)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence 46777788899999999999999999999999999999 9999999999999999999999 999999999999986
Q ss_pred ecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccc
Q 016786 184 VNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKG 263 (382)
Q Consensus 184 ~~~~~~~p~~~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~ 263 (382)
.+++++.. +.+..++..|+++.+.++++|++|....|.. +.+++...+ .|.+.-+++..+..... . +.++
T Consensus 136 ~~~~~~~~-~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-----~~~~~~~~~-~~~~g~~~~~~~~~~~~-~--~~~~ 205 (290)
T TIGR00776 136 RSKDKSAG-IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-----GVDGLSVLL-PQAIGMVIGGIIFNLGH-I--LAKP 205 (290)
T ss_pred eccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCcceehh-HHHHHHHHHHHHHHHHH-h--cccc
Confidence 65432111 0000223569999999999999999999743 112222222 13332222322222111 0 0011
Q ss_pred cchhcccccccchhHHHHHHHHHHHHHHHHhhh-hcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHH----HH
Q 016786 264 LSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGL-LGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKA----IA 338 (382)
Q Consensus 264 i~~e~~~f~~g~~~y~l~lv~~av~wq~~~vgv-vGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~ki----ig 338 (382)
+. .+ ..+..+. ..+.|.+.+..- .|.-.+..+..+.+.+...+.++.+.+++++||+.+..+. +|
T Consensus 206 -------~~-~~-~~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG 275 (290)
T TIGR00776 206 -------LK-KY-AILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVG 275 (290)
T ss_pred -------hH-HH-HHHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHH
Confidence 11 11 1111222 222354433221 2222244556677778888667799999999999999999 99
Q ss_pred HHHHHHHHHHH
Q 016786 339 MLLAIWGFLSY 349 (382)
Q Consensus 339 ~~L~l~G~~~y 349 (382)
.++++.|...-
T Consensus 276 ~~lIi~~~~l~ 286 (290)
T TIGR00776 276 IILIIIAANIL 286 (290)
T ss_pred HHHHHHHHHHH
Confidence 99999887664
No 22
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.35 E-value=5.6e-11 Score=113.33 Aligned_cols=294 Identities=14% Similarity=0.174 Sum_probs=211.3
Q ss_pred ccchhHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCc--hhhHHHHHHhhHHHHHHHHhhhccCC-CCCCCCCChhhHHH
Q 016786 36 KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNS--KWMATFVQSAGFPILLPILCCFSNGS-RSANTTDPKISTLV 112 (382)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~--~w~~t~vq~agfplll~~~~~~~~~~-~~~~~~~~~~~~l~ 112 (382)
.+..+|.-..+|+.....+--..-.+..+-|+-.|=| -|.-|++|+.=-..+- +.+.+- +.+....|+.....
T Consensus 36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~g----lie~~~~~~k~r~iP~rtY~~ 111 (367)
T KOG1582|consen 36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFG----LIELQLIQTKRRVIPWRTYVI 111 (367)
T ss_pred ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhh----heEEEeecccceecchhHhhh
Confidence 4566799999999999999999999999988876655 6999999975332221 122110 00012233222222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCC
Q 016786 113 CLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTS 192 (382)
Q Consensus 113 ~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~ 192 (382)
+ .+++++.+ -|-+-++.|++--|-.+.-+++++=+++.+.++-++|..+..+.+-.++.+|.++-.+.|..-+|
T Consensus 112 l----a~~t~gtm-GLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sP- 185 (367)
T KOG1582|consen 112 L----AFLTVGTM-GLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSP- 185 (367)
T ss_pred h----Hhhhhhcc-ccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCC-
Confidence 2 24444544 67778999999999999999999999999999999999999999999999999997777654323
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCc-cccchhcccc
Q 016786 193 GVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEW-KGLSKEMNGY 271 (382)
Q Consensus 193 ~~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~-~~i~~e~~~f 271 (382)
.-..+|..++-+|-.+=|+..=+.|..+++. +. ...||..+..-++.+++.+.+..+||. +.++. .
T Consensus 186 ----NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~-~~----ss~EmvfySy~iG~vflf~~mvlTge~f~a~~f----c 252 (367)
T KOG1582|consen 186 ----NFNLIGVMMISGALLADAVIGNVQEKAMKMN-PA----SSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTF----C 252 (367)
T ss_pred ----CcceeeHHHHHHHHHHHHHhhHHHHHHHhhC-CC----CcceEEEeeecccHHHHHHHHHhcccchhhhHH----H
Confidence 2357899999999999999888887777765 22 237888898889999999999998872 22211 1
Q ss_pred cccch-hHHHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHH
Q 016786 272 GEGRV-SYLMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYI 350 (382)
Q Consensus 272 ~~g~~-~y~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~ 350 (382)
.+-++ .|--.+......+ +-.+.+..++...+++.+..|.+.+..++.++++++|-.+++..-+-|+.+++.|....+
T Consensus 253 aehp~~tyGy~~~~s~~gy-lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ 331 (367)
T KOG1582|consen 253 AEHPVRTYGYAFLFSLAGY-LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNM 331 (367)
T ss_pred HhCcHhHHHHHHHHHHHhH-hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhc
Confidence 11111 1111111111100 111235556666678889999999999999999999999999999999999999988888
Q ss_pred hhc
Q 016786 351 YQH 353 (382)
Q Consensus 351 y~~ 353 (382)
|.+
T Consensus 332 ysk 334 (367)
T KOG1582|consen 332 YSK 334 (367)
T ss_pred ccC
Confidence 865
No 23
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.32 E-value=8.4e-10 Score=105.00 Aligned_cols=152 Identities=12% Similarity=0.053 Sum_probs=103.6
Q ss_pred hhhHHHHHHHHHhcCCCchhhHHHHHHh-hHHHHHHHHhhhccCCC-CCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhh
Q 016786 55 QSAATLLGRLYYDKGGNSKWMATFVQSA-GFPILLPILCCFSNGSR-SANTTDPKISTLVCLYVAFGLLLTGDNMMYSYG 132 (382)
Q Consensus 55 ~~~~~Ll~r~y~~~gg~~~w~~t~vq~a-gfplll~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~g 132 (382)
-..+.+..|+. . +-+++...+.... |.+++++.....+++++ +++.+++..+++.......|++.+.++.+|.+|
T Consensus 14 wg~~~~~~k~~--~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a 90 (256)
T TIGR00688 14 FGYMYYYSKLL--K-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWA 90 (256)
T ss_pred HHHHHHHHHHh--c-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677862 2 2566666666654 55554433323221110 000000111122333455678788899999999
Q ss_pred hccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 016786 133 LLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASAT 212 (382)
Q Consensus 133 l~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~~~iG~~l~l~Aa~~ 212 (382)
++|+|+++++++.++.|+|+++++.+++|||++++++.++++.++|++++..+ +++ .. ++.++++++
T Consensus 91 ~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~-~~~--------~~----~~~l~aa~~ 157 (256)
T TIGR00688 91 VNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVL-KGS--------LP----WEALVLAFS 157 (256)
T ss_pred HHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-cCC--------ch----HHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987432 111 11 356789999
Q ss_pred HHHHHHHHHH
Q 016786 213 YSLYLSLLQL 222 (382)
Q Consensus 213 ~al~~~l~q~ 222 (382)
|++|....|+
T Consensus 158 ~a~~~i~~~~ 167 (256)
T TIGR00688 158 FTAYGLIRKA 167 (256)
T ss_pred HHHHHHHHhh
Confidence 9998887744
No 24
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.30 E-value=2.6e-11 Score=105.92 Aligned_cols=150 Identities=22% Similarity=0.247 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhccccc--c-cchhH
Q 016786 202 GFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYG--E-GRVSY 278 (382)
Q Consensus 202 G~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~--~-g~~~y 278 (382)
|+++++.|+++.|++.++.|+.+++..++......++++.+.+..+.+++....+..++++..+...+.+. - .....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78999999999999999999998885333445678999999999999999977666655442322222111 0 12345
Q ss_pred HHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHh
Q 016786 279 LMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIY 351 (382)
Q Consensus 279 ~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y 351 (382)
...++...+.+.+.+.....++..+|+++-+++..++.+++.++++++|||++++.+++|.+++++|...|-|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5567777888888888889999999999999999999999999999999999999999999999999998865
No 25
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.27 E-value=1.2e-09 Score=105.45 Aligned_cols=218 Identities=11% Similarity=0.110 Sum_probs=142.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCC
Q 016786 109 STLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADS 188 (382)
Q Consensus 109 ~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~ 188 (382)
||.+......+++++.|-.+|.++.+.=-+--.|+=+--+|+++.+++.+++|||+++.|+++++++.+|+....++.++
T Consensus 69 p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~ 148 (293)
T COG2962 69 PKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS 148 (293)
T ss_pred cHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC
Confidence 36677778889999999999999999866666788888899999999999999999999999999999999987676543
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-ceEEehhHHHHHHHHHHHHHHHHHhcCCccccchh
Q 016786 189 ENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKET-FSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKE 267 (382)
Q Consensus 189 ~~p~~~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~-~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e 267 (382)
- | +.+++=+..|++|..+ ||..+.+. ....+|+.. -.+++++-++...|-.+.
T Consensus 149 l-p------------wval~la~sf~~Ygl~-----RK~~~v~a~~g~~lE~l~-----l~p~al~yl~~l~~~~~~--- 202 (293)
T COG2962 149 L-P------------WVALALALSFGLYGLL-----RKKLKVDALTGLTLETLL-----LLPVALIYLLFLADSGQF--- 202 (293)
T ss_pred C-c------------HHHHHHHHHHHHHHHH-----HHhcCCchHHhHHHHHHH-----HhHHHHHHHHHHhcCchh---
Confidence 2 2 5566667788887654 44333322 123444433 334444433333331110
Q ss_pred cccccccchhHH----HHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHH
Q 016786 268 MNGYGEGRVSYL----MTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAI 343 (382)
Q Consensus 268 ~~~f~~g~~~y~----l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l 343 (382)
..++..... +.=..+++...++..+ ....+--+-++..-+.+.+..++|++++||+++..|.++.+++-
T Consensus 203 ---~~~~~~~~~~LLv~aG~vTavpL~lf~~a----a~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW 275 (293)
T COG2962 203 ---LQQNANSLWLLLVLAGLVTAVPLLLFAAA----AKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIW 275 (293)
T ss_pred ---hhcCCchHHHHHHHhhHHHHHHHHHHHHH----HhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 111111111 1222333333333222 00111112344455566688999999999999999999999999
Q ss_pred HHHHHHHhhccchhhh
Q 016786 344 WGFLSYIYQHYLDDYK 359 (382)
Q Consensus 344 ~G~~~y~y~~~~~~~~ 359 (382)
.|...|......+.||
T Consensus 276 ~aL~l~~~d~l~~~r~ 291 (293)
T COG2962 276 LALALFSIDGLYTARK 291 (293)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999998865544443
No 26
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.13 E-value=9.8e-10 Score=102.67 Aligned_cols=214 Identities=14% Similarity=0.140 Sum_probs=139.3
Q ss_pred HHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCchh
Q 016786 120 LLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNY 199 (382)
Q Consensus 120 ll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~~ 199 (382)
.++.-+|.+...++.+.++...... +.|.+.++++...+++++++..|+.++.++..|+.....++..++ ....+..
T Consensus 7 ~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~--~~~~g~~ 83 (222)
T TIGR00803 7 HIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAK--TLMFGNP 83 (222)
T ss_pred hHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcc--ccccccH
Confidence 4455566555588888888889988 999999999999999999999999999998888887654433211 1122356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccchhHH
Q 016786 200 VIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYL 279 (382)
Q Consensus 200 ~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~~~y~ 279 (382)
..|..+.+.+....++-.+..|+.+|+ .. ...-+......++.......+....+ ....+. ..|.+|....
T Consensus 84 ~~g~~~~l~a~~~~~~~~~y~e~~~k~----~~-~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~- 154 (222)
T TIGR00803 84 VVGLSAVLSALLSSGFAGVYFEKILKD----GD-TMFWSRNLQLPLFGLFSTFSVLLWSD-GTLISN--FGFFIGYPTA- 154 (222)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHcccC----CC-CchHHHHHHHHHHHHHHHHHHHhhcc-cchhhc--cCcccCCchH-
Confidence 788888888888888855555444332 11 11222222233333333334443322 222211 2333333322
Q ss_pred HHHHHHHHHHHH-HHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Q 016786 280 MTLIWTAVTWQI-SSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLS 348 (382)
Q Consensus 280 l~lv~~av~wq~-~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~ 348 (382)
+|..+.-++ ....+..+.++.++++.+++.+.++.++.++++++|||+++..+.+|..+++.|...
T Consensus 155 ---~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 ---VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred ---HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 222221122 223456677789999999999999999999999999999999999999999966543
No 27
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.04 E-value=1.6e-10 Score=109.99 Aligned_cols=195 Identities=15% Similarity=0.200 Sum_probs=119.6
Q ss_pred HHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCC--C-----CCCCCCC
Q 016786 123 TGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD--S-----ENTSGVS 195 (382)
Q Consensus 123 ~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~--~-----~~p~~~~ 195 (382)
.+-.++| +++.|+|.+=++++.-+.|.||++||+.++|||+|++..++..+.+.|++++.-.++ + ++.++.+
T Consensus 109 tgvmlmy-ya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~ 187 (346)
T KOG4510|consen 109 TGVMLMY-YALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVE 187 (346)
T ss_pred hHHHHHH-HHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccccc
Confidence 3444667 999999999999999999999999999999999999999999999999999842221 1 1111111
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccc
Q 016786 196 KGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGR 275 (382)
Q Consensus 196 ~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~ 275 (382)
...-|-..++.++..-|-.. ...|++.|+-.+.+.+ -|-++++.+..++|...-|+++ +|+--+.+
T Consensus 188 --~~~~gt~aai~s~lf~asvy----IilR~iGk~~h~~msv---syf~~i~lV~s~I~~~~ig~~~-lP~cgkdr---- 253 (346)
T KOG4510|consen 188 --YDIPGTVAAISSVLFGASVY----IILRYIGKNAHAIMSV---SYFSLITLVVSLIGCASIGAVQ-LPHCGKDR---- 253 (346)
T ss_pred --ccCCchHHHHHhHhhhhhHH----HHHHHhhccccEEEEe---hHHHHHHHHHHHHHHhhcccee-cCccccce----
Confidence 11234444443333333322 2335444544555444 3445677788888887777764 66532221
Q ss_pred hhHHHHHHHHHHHHHHH-Hhh-------hhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHH
Q 016786 276 VSYLMTLIWTAVTWQIS-SVG-------LLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIW 344 (382)
Q Consensus 276 ~~y~l~lv~~av~wq~~-~vg-------vvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~ 344 (382)
..+..+...-+.-|+. .+| =+.+..+ .-+..+.+..+++|||.++++.++|+++++.
T Consensus 254 -~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~-----------~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvs 318 (346)
T KOG4510|consen 254 -WLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTY-----------TDVVFAFFWQVLFFGHWPTIWSWVGAVMVVS 318 (346)
T ss_pred -EEEEEehhhhhHHHHHHHHHhhhhccCCeehhhH-----------HHHHHHHHHHHHHhcCCChHHHhhceeeeeh
Confidence 0011122222222221 111 1111111 1123446788899999999999999998773
No 28
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.96 E-value=7e-09 Score=97.43 Aligned_cols=220 Identities=15% Similarity=0.201 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCC
Q 016786 115 YVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGV 194 (382)
Q Consensus 115 ~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~ 194 (382)
|+.+.+-+-+.-.--+.+++|.|--|..+=-+++|+=++++++++.+++.+|++...+.+..+|+++--..+.. -.+.
T Consensus 88 YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K--v~g~ 165 (337)
T KOG1580|consen 88 YAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK--VGGA 165 (337)
T ss_pred HHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc--cCCC
Confidence 44444444444455568999999999999999999999999999999999999999999999999987555321 1233
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhccccccc
Q 016786 195 SKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEG 274 (382)
Q Consensus 195 ~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g 274 (382)
++....+|=++.+.+-.+=|+-.++.++..+.+ .+ ..-+|..++.+++++.+.+|++..||..+.-+ |.+-
T Consensus 166 e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-q~----~g~~MM~~~NlwStL~Lg~g~lfTGElweF~y----F~~R 236 (337)
T KOG1580|consen 166 EDKTFGFGELLLILSLAMDGLTGSIQDRIRASY-QR----TGTSMMFYTNLWSTLYLGAGLLFTGELWEFFY----FVQR 236 (337)
T ss_pred cccccchHHHHHHHHHHhcccchhHHHHHHHhh-cc----CchhhHHHHHHHHHHHhhhhheehhhHHHHHH----HHHh
Confidence 444567899999999999998777776666554 22 23457778888889999999999987432211 1110
Q ss_pred chhHHHHHHHHHHHHHHHH-hh---hhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Q 016786 275 RVSYLMTLIWTAVTWQISS-VG---LLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSY 349 (382)
Q Consensus 275 ~~~y~l~lv~~av~wq~~~-vg---vvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y 349 (382)
.. ...|......++. +| +.-.+-+-+.+.-+++.+-+.-.+.+.+|++|++++++.|++|.++++.+...=
T Consensus 237 hP----~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 237 HP----YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred cc----HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 00 1222222222211 11 111122346677788888888899999999999999999999999998666543
No 29
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.87 E-value=7.9e-09 Score=94.88 Aligned_cols=213 Identities=19% Similarity=0.287 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCc
Q 016786 118 FGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKG 197 (382)
Q Consensus 118 ~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~ 197 (382)
..+++...|++|-.+++.+++|..+-+.+++-+|+-+++++.+|+|+.-.++.+.++++.|+++++..|. ..+
T Consensus 59 F~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN-------~~a 131 (290)
T KOG4314|consen 59 FSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN-------EHA 131 (290)
T ss_pred eEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc-------hhh
Confidence 4567788899999999999999999999999999999999999999999999999999999999875543 223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHH---HHHHHHH---HHHHhcCCccccchhcccc
Q 016786 198 NYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSF---VATCGCV---VGLFASGEWKGLSKEMNGY 271 (382)
Q Consensus 198 ~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l---~a~~~~~---igl~~~g~~~~i~~e~~~f 271 (382)
...+|+.++++++...++| +.+||+.+..-.+- |..-+++. +-.++-- +-+...|. .. .++|
T Consensus 132 ~e~iGi~~AV~SA~~aAlY----KV~FK~~iGnAn~G---daa~FmS~LGF~NL~~~~~~~lIL~~T~V-E~----~qsF 199 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALY----KVLFKMFIGNANFG---DAAHFMSCLGFFNLCFISFPALILAFTGV-EH----LQSF 199 (290)
T ss_pred hhhhhHHHHHHHHHHHHHH----HHHHHHHhccCcch---hHHHHHHHHHHHHHHHHhhhHHHHHHhch-HH----HHHH
Confidence 5689999999999999995 55667765433322 22222222 1111111 11222221 01 1223
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhh-hcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHH
Q 016786 272 GEGRVSYLMTLIWTAVTWQISSVGL-LGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYI 350 (382)
Q Consensus 272 ~~g~~~y~l~lv~~av~wq~~~vgv-vGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~ 350 (382)
...+| -.+++.+..|.+++..+ +|+. ....++-++=..+.+|.....-.++=+-.++...+.|..++..|+...+
T Consensus 200 A~~PW---G~l~G~A~L~lAFN~~iN~Gia-L~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLii 275 (290)
T KOG4314|consen 200 AAAPW---GCLCGAAGLSLAFNFLINFGIA-LLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILII 275 (290)
T ss_pred hhCCc---hhhhhHHHHHHHHhhheeehhh-hhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhee
Confidence 33222 24677777777765442 2332 3355666666777788888777777777888899999999999988876
Q ss_pred hhc
Q 016786 351 YQH 353 (382)
Q Consensus 351 y~~ 353 (382)
..+
T Consensus 276 iP~ 278 (290)
T KOG4314|consen 276 IPE 278 (290)
T ss_pred ccc
Confidence 643
No 30
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.86 E-value=8.2e-07 Score=86.93 Aligned_cols=224 Identities=16% Similarity=0.210 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCch
Q 016786 119 GLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGN 198 (382)
Q Consensus 119 Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~ 198 (382)
.++..++-..=..+++|+|++++++++..-++++++.-..++|.|+++..+.|++++.+|....+..|.+.
T Consensus 84 ~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf--------- 154 (314)
T KOG1444|consen 84 SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF--------- 154 (314)
T ss_pred HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee---------
Confidence 44444443444578999999999999999999999999999999999999999999999999876665443
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccchhH
Q 016786 199 YVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSY 278 (382)
Q Consensus 199 ~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~~~y 278 (382)
...|....+...+.-+.+.+..++..+. .. ..-.++..|-.+.+.++..+-.+..|||+++..+-..+.+- ..
T Consensus 155 ~~~gY~w~~~n~~~~a~~~v~~kk~vd~----~~-l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~--~~ 227 (314)
T KOG1444|consen 155 NLRGYSWALANCLTTAAFVVYVKKSVDS----AN-LNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDS--SV 227 (314)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhcc----cc-ccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccch--hH
Confidence 2347777887777777766666433332 21 12334455667788888887777888876443322222111 11
Q ss_pred HHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhhccchhh
Q 016786 279 LMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQHYLDDY 358 (382)
Q Consensus 279 ~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~~~~~~~ 358 (382)
++.+....+.=++..-...--+-..|+++-+++-..-+-.+.+..++++++++++..++|+.+.+.|-..|-|..+.++|
T Consensus 228 ~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~ 307 (314)
T KOG1444|consen 228 LVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKK 307 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhcc
Confidence 11111111111110000011111235555555553333445566666777999999999999999999998886544433
No 31
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.82 E-value=3.2e-09 Score=101.53 Aligned_cols=219 Identities=19% Similarity=0.263 Sum_probs=153.7
Q ss_pred HHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCchhH
Q 016786 121 LLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYV 200 (382)
Q Consensus 121 l~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~~~ 200 (382)
.+..+| +.++|.|++-|.+=++.-.+||.+++|+++|||-+..-..+..+.++|--+ |++..+ .++.-..
T Consensus 115 mI~fnn----lcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l-GvdqE~-----~~~~ls~ 184 (347)
T KOG1442|consen 115 MISFNN----LCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL-GVDQEG-----STGTLSW 184 (347)
T ss_pred ehhccc----eehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee-cccccc-----ccCccch
Confidence 345564 567899999999999999999999999999999999888877766666544 444321 1222356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccc-hhHH
Q 016786 201 IGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGR-VSYL 279 (382)
Q Consensus 201 iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~-~~y~ 279 (382)
.|.+.-+.|++.-|+-.+.. ||+..... .-.-.+..|..+.|.++.+--+.++||++++ ..|.+-+ +.+|
T Consensus 185 ~GvifGVlaSl~vAlnaiyt----kk~l~~v~-~~iw~lt~ynnv~a~lLflpll~lnge~~~v----~~~~~l~a~~Fw 255 (347)
T KOG1442|consen 185 IGVIFGVLASLAVALNAIYT----KKVLPPVG-DCIWRLTAYNNVNALLLFLPLLILNGEFQAV----VGFPHLPAIKFW 255 (347)
T ss_pred hhhHHHHHHHHHHHHHHHhh----heeccccc-CeehhhHHHHHHHHHHHHHHHHHHcchHHHH----cCcccchHHHHH
Confidence 89999999999988844433 45432211 2244578888889988888888899998766 3344432 2222
Q ss_pred HHHHHHHHHHHHHHhh-hhc-ceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhhccchh
Q 016786 280 MTLIWTAVTWQISSVG-LLG-LVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQHYLDD 357 (382)
Q Consensus 280 l~lv~~av~wq~~~vg-vvG-l~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~~~~~~ 357 (382)
..+....+ .-+.+| ++| .++.+|.++-++--+.+-....++|+.+++|.-+...+-+-++++.|...|.+-+-.+.
T Consensus 256 ~~mtLsgl--fgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em 333 (347)
T KOG1442|consen 256 ILMTLSGL--FGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEM 333 (347)
T ss_pred HHHHHHHH--HHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHH
Confidence 21111110 001223 333 45568999999888888888899999999999999999999999999999977654444
Q ss_pred hhh
Q 016786 358 YKS 360 (382)
Q Consensus 358 ~~~ 360 (382)
||+
T Consensus 334 ~~~ 336 (347)
T KOG1442|consen 334 RKA 336 (347)
T ss_pred Hhh
Confidence 443
No 32
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.80 E-value=2.8e-08 Score=83.60 Aligned_cols=70 Identities=21% Similarity=0.376 Sum_probs=63.0
Q ss_pred HHHHHHH-HHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCC
Q 016786 117 AFGLLLT-GDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD 187 (382)
Q Consensus 117 ~~Gll~~-~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~ 187 (382)
..|++.. .++.+|.+|++|.| +..+++.+++++|+++++.+++|||++++++.++++.++|++++++++.
T Consensus 39 ~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 39 LAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 3356554 77899999999999 5888999999999999999999999999999999999999999987764
No 33
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.72 E-value=1.6e-07 Score=77.86 Aligned_cols=118 Identities=17% Similarity=0.195 Sum_probs=83.6
Q ss_pred HHHHHHHHHhcCCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHH-HHHHHHHHHhhhccC
Q 016786 58 ATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLL-LTGDNMMYSYGLLYL 136 (382)
Q Consensus 58 ~~Ll~r~y~~~gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll-~~~~n~Ly~~gl~yl 136 (382)
.....|...++ -+..++..+-...+.+ +++...+.+.++ ..+.+. +........|++ .+..+.+|..+++++
T Consensus 6 ~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 6 YSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKP-FKNLSP----RQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred HHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhcccc-ccCCCh----hhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 34555555555 4556666666666766 554444433221 111111 122222333555 577789999999999
Q ss_pred chhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhh
Q 016786 137 PVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLL 182 (382)
Q Consensus 137 p~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll 182 (382)
|++..+++..++|+++++++++++|||++++++.|+++.++|++++
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999875
No 34
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.69 E-value=5.7e-06 Score=80.57 Aligned_cols=260 Identities=15% Similarity=0.168 Sum_probs=170.5
Q ss_pred CchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHH
Q 016786 71 NSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLA 150 (382)
Q Consensus 71 ~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~ 150 (382)
+++=+..+.|...--++- +...+.++.+..+..|++ + |...++.......+-..|++|++--|..+--+++.+
T Consensus 49 ~~~~fL~~~q~l~~~~~s--~~~l~~~k~~~~~~apl~-~----y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmI 121 (327)
T KOG1581|consen 49 EHSLFLVFCQRLVALLVS--YAMLKWWKKELSGVAPLY-K----YSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMI 121 (327)
T ss_pred cccHHHHHHHHHHHHHHH--HHHHhcccccCCCCCchh-H----HhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhh
Confidence 445555566654443333 222222221112334433 3 334466666666676699999999999999999999
Q ss_pred HHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 016786 151 FNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKK 230 (382)
Q Consensus 151 Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~ 230 (382)
=+++...++-|+|++.+......+...|+.+-.+.+.+|.+.+..+.+.+.|+.+..+--+.=|+ ++-..+++.+.
T Consensus 122 PVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgf----Tn~tQd~lf~~ 197 (327)
T KOG1581|consen 122 PVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGF----TNATQDSLFKK 197 (327)
T ss_pred HHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhh----HHhHHHHHhcc
Confidence 99999999999999999999999999998886655544433222223568999988877666666 33334444321
Q ss_pred ccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccchhHHHHHHHHHHHHHHHHhhhhcceee------eh
Q 016786 231 ETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFE------VS 304 (382)
Q Consensus 231 ~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~~~y~l~lv~~av~wq~~~vgvvGl~~~------~s 304 (382)
.-.....|...+.++.++...++++..|.+.+- -.|-.-.. -..+..+.+.. .|.+|..|. -+
T Consensus 198 -~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~a----v~F~~~hp----~~~~Di~l~s~--~gavGQ~FI~~TI~~FG 266 (327)
T KOG1581|consen 198 -YKVSSLHMMFGVNLFSAILNGTYLILQGHLLPA----VSFIKEHP----DVAFDILLYST--CGAVGQLFIFYTIERFG 266 (327)
T ss_pred -CCccHhHHHHHHHHHHHHHHHHhhhcCCCCchH----HHHHHcCh----hHHHHHHHHHH--hhhhhhheehhhHhhcc
Confidence 123456688888899999999998776653211 11211000 02333333332 455665442 23
Q ss_pred hhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhh
Q 016786 305 SLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQ 352 (382)
Q Consensus 305 sl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~ 352 (382)
++.-..|.+.|-.++.+++.+.||.+++..|.+|..+++.|...=+|-
T Consensus 267 slt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~ 314 (327)
T KOG1581|consen 267 SLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILL 314 (327)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHH
Confidence 555666788888999999999999999999999999998666554553
No 35
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.48 E-value=2.2e-05 Score=74.86 Aligned_cols=260 Identities=18% Similarity=0.202 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhcCCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHH
Q 016786 42 LRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLL 121 (382)
Q Consensus 42 ~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll 121 (382)
+.+.++...+=.|.+.+. --|-+-| +|--|++..+-=.+++. .+++..++| ..++.++.++.+ |+-
T Consensus 15 ~~ll~amvsiq~Gas~Ak----~LFP~vG--~~g~t~lRl~~aaLIll--~l~RPwr~r--~~~~~~~~~~~y----Gvs 80 (292)
T COG5006 15 LALLVAMVSIQSGASFAK----SLFPLVG--AAGVTALRLAIAALILL--ALFRPWRRR--LSKPQRLALLAY----GVS 80 (292)
T ss_pred HHHHHHHHHHHhhHHHHH----HHccccC--hhhHHHHHHHHHHHHHH--HHhhHHHhc--cChhhhHHHHHH----HHH
Confidence 444555555545544443 3355433 34445554433333322 223322222 233345556666 888
Q ss_pred HHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCchhHH
Q 016786 122 LTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVI 201 (382)
Q Consensus 122 ~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~~~i 201 (382)
++..|++|..++..+|.++..-+--+.++-.++++ .+|..-..|+ .++..|..++.-...+. ..-...
T Consensus 81 Lg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr~~d~vwv--aLAvlGi~lL~p~~~~~------~~lDp~ 148 (292)
T COG5006 81 LGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRRLRDFVWV--ALAVLGIWLLLPLGQSV------WSLDPV 148 (292)
T ss_pred HHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----ccchhhHHHH--HHHHHHHHhheeccCCc------CcCCHH
Confidence 99999888899999999999988888887766654 4555555554 55666766663222111 113579
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHH-HHHHhcCCccccchhcccccccch---h
Q 016786 202 GFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCV-VGLFASGEWKGLSKEMNGYGEGRV---S 277 (382)
Q Consensus 202 G~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~-igl~~~g~~~~i~~e~~~f~~g~~---~ 277 (382)
|..++++|.++|++|.+.+|+.=+.. .-..- ...-.++|.++.+ +|..-.|. . +.+-+. .
T Consensus 149 Gv~~Al~AG~~Wa~YIv~G~r~g~~~----~g~~g---~a~gm~vAaviv~Pig~~~ag~--~-------l~~p~ll~la 212 (292)
T COG5006 149 GVALALGAGACWALYIVLGQRAGRAE----HGTAG---VAVGMLVAALIVLPIGAAQAGP--A-------LFSPSLLPLA 212 (292)
T ss_pred HHHHHHHHhHHHHHHHHHcchhcccC----CCchH---HHHHHHHHHHHHhhhhhhhcch--h-------hcChHHHHHH
Confidence 99999999999999999996555421 11111 1112234444444 55422221 1 111000 0
Q ss_pred HHHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Q 016786 278 YLMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFL 347 (382)
Q Consensus 278 y~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~ 347 (382)
.-..+..+++.|.+=-+....+-. =.=++..++.+.+..+.+++++||.++..|+.|+++++.+..
T Consensus 213 LgvavlSSalPYsLEmiAL~rlp~----~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 213 LGVAVLSSALPYSLEMIALRRLPA----RTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHHHhcccchHHHHHHHhhCCh----hHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 001222333333332111111111 112344555555779999999999999999999999986554
No 36
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.31 E-value=8.7e-05 Score=71.96 Aligned_cols=146 Identities=16% Similarity=0.114 Sum_probs=102.3
Q ss_pred CCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHH-HHHhhh
Q 016786 70 GNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYS-LLCATQ 148 (382)
Q Consensus 70 g~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~s-ll~ssq 148 (382)
|-||-=|++=.+.|--+.-...+++..+. -+...+.+..++.+|++.+..|.....+.+++.+|..- +-...|
T Consensus 9 gG~~~~Q~lG~t~Gali~alv~~~~~~p~------~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~Q 82 (269)
T PF06800_consen 9 GGKPANQILGTTIGALIFALVVFLFRQPA------FSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQ 82 (269)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhCCC------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHH
Confidence 34455555555555544444344432111 11124778889999999999998777888876665443 233789
Q ss_pred HHHHHHHHHHHhcCccChhHHH----HHHHHHHHHHhheecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 016786 149 LAFNAFFSFFLNSQKFTPFIFN----SLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQL 222 (382)
Q Consensus 149 l~Ftaifs~lilkek~t~~~i~----svvLl~~G~vll~~~~~~~~p~~~~~~~~~iG~~l~l~Aa~~~al~~~l~q~ 222 (382)
++.|++.++++++|--+..++. ++++.++|+.+.+.++.+++. ..++++..-|+...+++++.|..|.++.|.
T Consensus 83 Lvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~-~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~ 159 (269)
T PF06800_consen 83 LVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK-SSSKSNMKKGILALLISTIGYWIYSVIPKA 159 (269)
T ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999987776654 899999999998877654421 112334566999999999999999888755
No 37
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.24 E-value=7.3e-08 Score=91.64 Aligned_cols=248 Identities=12% Similarity=0.134 Sum_probs=161.1
Q ss_pred CCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhh
Q 016786 69 GGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQ 148 (382)
Q Consensus 69 gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssq 148 (382)
|=|-|=.||++.-+-..+.--|+..++++ ..+-.+--|+.+++.=.-.|++---|.+|++-...+++-+-.
T Consensus 44 ~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~---------~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwa 114 (336)
T KOG2766|consen 44 GINAPTSQTFLNYVLLALVYGPIMLFRRK---------YIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWA 114 (336)
T ss_pred cCCCccHHHHHHHHHHHHHHhhHHHhhhH---------HHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhh
Confidence 45778889988776666655555555431 111112226666776666666666888999999999999999
Q ss_pred HHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016786 149 LAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVI 228 (382)
Q Consensus 149 l~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~ 228 (382)
.+-..+++++++|-|..+.++.|+++...|++++.++|-.. .+...+.+...|+.+.+++|-+||..-...|..-||.
T Consensus 115 ip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~a-gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~- 192 (336)
T KOG2766|consen 115 IPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHA-GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA- 192 (336)
T ss_pred hHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecc-ccccCCCCCccCcEEEEecceeeeeccccHHHHHhcC-
Confidence 99999999999999999999999999999999986665322 1111233567899999999999999777777777765
Q ss_pred hcccceEEehhHHHHHHHHHHHHHHHHHhcCC-ccccchhcccccccchhHHHHHHHHHHHHHHHH-----hhhhcceee
Q 016786 229 KKETFSVVLDMQIYSSFVATCGCVVGLFASGE-WKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISS-----VGLLGLVFE 302 (382)
Q Consensus 229 ~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~-~~~i~~e~~~f~~g~~~y~l~lv~~av~wq~~~-----vgvvGl~~~ 302 (382)
. ..|+..+.+++++++..+=++.+.. -+.+..+ + +...+ +......+.... +-..|-+.+
T Consensus 193 ---d---~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w~---~---~i~~y--l~f~L~MFllYsl~pil~k~~~aT~~ 258 (336)
T KOG2766|consen 193 ---D---RVELMGFLGLFGAIISAIQFIFERHHVSTLHWD---S---AIFLY--LRFALTMFLLYSLAPILIKTNSATMF 258 (336)
T ss_pred ---c---HHHHHHHHHHHHHHHHHHHHhhhccceeeEeeh---H---HHHHH--HHHHHHHHHHHHhhHHheecCCceEE
Confidence 2 5577788899999988887655542 1122111 1 11111 111111111111 112222222
Q ss_pred ehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Q 016786 303 VSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSY 349 (382)
Q Consensus 303 ~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y 349 (382)
.=+++. .=.+-+-+-.||-+.+|.-.++.+.+..|+..|
T Consensus 259 nlslLT--------sDmwsl~i~~FgYhv~wLY~laF~~i~~GliiY 297 (336)
T KOG2766|consen 259 NLSLLT--------SDMWSLLIRTFGYHVDWLYFLAFATIATGLIIY 297 (336)
T ss_pred EhhHhH--------HHHHHHHHHHHhcchhhhhHHHHHHHHHhhEEe
Confidence 111111 111223336788889999999999999888877
No 38
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.24 E-value=4.5e-05 Score=77.00 Aligned_cols=69 Identities=4% Similarity=-0.020 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCC
Q 016786 119 GLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD 187 (382)
Q Consensus 119 Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~ 187 (382)
|+..+....+|++++++++++..++....+|+|++++++++++|++++.++.|.++.+.|+.++..+..
T Consensus 263 ~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~ 331 (358)
T PLN00411 263 AIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKA 331 (358)
T ss_pred HHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence 344455668999999999999999999999999999999999999999999999999999999765543
No 39
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.21 E-value=2.8e-05 Score=76.65 Aligned_cols=66 Identities=23% Similarity=0.280 Sum_probs=58.9
Q ss_pred HHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCC
Q 016786 122 LTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD 187 (382)
Q Consensus 122 ~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~ 187 (382)
++..+.+-..|+.+.|++..+=+.+.+++++++++.+++|||++++.+.|+++.++|.+++.....
T Consensus 60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~ 125 (300)
T PF05653_consen 60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP 125 (300)
T ss_pred HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence 355556777999999999999999999999999999999999999999999999999988765543
No 40
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.20 E-value=1.4e-05 Score=67.50 Aligned_cols=65 Identities=11% Similarity=0.114 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhhee
Q 016786 120 LLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV 184 (382)
Q Consensus 120 ll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~ 184 (382)
+.++....++..+++.+|.|++..+-+++.+++++.+++++|||+|+.++.++++.++|+++++.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34566778999999999999999999999999999999999999999999999999999999853
No 41
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.09 E-value=0.00015 Score=68.45 Aligned_cols=117 Identities=15% Similarity=0.189 Sum_probs=76.4
Q ss_pred hhHHHHHHHHHhcCCCch-hhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHH-HHHHHHHHHhhh
Q 016786 56 SAATLLGRLYYDKGGNSK-WMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLL-LTGDNMMYSYGL 133 (382)
Q Consensus 56 ~~~~Ll~r~y~~~gg~~~-w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll-~~~~n~Ly~~gl 133 (382)
+...+..|...++.+..+ .+..+....|.++++|..+... +.+ .. ..+.+..-...|++ ......+|..++
T Consensus 141 a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~ 213 (260)
T TIGR00950 141 ALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLG-PNP---QA---LSLQWGALLYLGLIGTALAYFLWNKGL 213 (260)
T ss_pred HHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcC-CCC---Cc---chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555544333222 3444556666666555444322 111 11 11222112222333 345558888999
Q ss_pred ccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHH
Q 016786 134 LYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISA 179 (382)
Q Consensus 134 ~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~ 179 (382)
+++|+++.+++..++|++++++++++++||+++.++.|+++.+.|+
T Consensus 214 ~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 214 TLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999885
No 42
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.08 E-value=1.2e-05 Score=69.31 Aligned_cols=113 Identities=17% Similarity=0.140 Sum_probs=86.7
Q ss_pred CCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhh
Q 016786 69 GGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQ 148 (382)
Q Consensus 69 gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssq 148 (382)
.|-.|=++|.+.+.=.-+.+...++.+-+... .....+|-+..-+.+|+..+..-++|..+++.=++|-..=+-.+.
T Consensus 27 ~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~---~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~s 103 (140)
T COG2510 27 EGVDPDFATTIRTIVILIFLLIVLLVTGNWQA---GGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTS 103 (140)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHHhcCceec---ccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEccccc
Confidence 44567788888776555544433333322111 111334556667788998888889999999999999999999999
Q ss_pred HHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhhee
Q 016786 149 LAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV 184 (382)
Q Consensus 149 l~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~ 184 (382)
++|+++||++++|||+|..+++|++|.++|+++++.
T Consensus 104 vvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 104 VVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 999999999999999999999999999999998753
No 43
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.06 E-value=0.00014 Score=63.19 Aligned_cols=127 Identities=19% Similarity=0.166 Sum_probs=94.9
Q ss_pred hhhHHHHHHHHHhc------CCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCC----CC--CChhhHHHHHHHHHHHHH
Q 016786 55 QSAATLLGRLYYDK------GGNSKWMATFVQSAGFPILLPILCCFSNGSRSAN----TT--DPKISTLVCLYVAFGLLL 122 (382)
Q Consensus 55 ~~~~~Ll~r~y~~~------gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~----~~--~~~~~~l~~~~~~~Gll~ 122 (382)
++.-..+.+..+++ .-+..=+..+....++++++|+.++....+..+. .. .+..++.+..-+..|++.
T Consensus 12 ~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
T PF03151_consen 12 SALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLA 91 (153)
T ss_pred HHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHH
Confidence 34444455555544 3355667888889999999988877643321111 11 011234455555678888
Q ss_pred HHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHh
Q 016786 123 TGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATL 181 (382)
Q Consensus 123 ~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vl 181 (382)
...|+....-++++++-|++++...+-+++.+++.++++|++|..++.|+++.++|+.+
T Consensus 92 ~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 92 FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 88888888999999999999999999999999999999999999999999999999875
No 44
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.00 E-value=0.00033 Score=68.26 Aligned_cols=67 Identities=15% Similarity=0.147 Sum_probs=59.3
Q ss_pred HHH-HHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheec
Q 016786 119 GLL-LTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN 185 (382)
Q Consensus 119 Gll-~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~ 185 (382)
|+. ....+.+|+++++++|++..+++...||+|++++++++++|++++.++.|.++.+.|++.....
T Consensus 215 gv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 215 AILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 443 3445579999999999999999999999999999999999999999999999999998886443
No 45
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.94 E-value=0.00015 Score=70.91 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=85.0
Q ss_pred CchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhc-cCchhHHHHHHhhhH
Q 016786 71 NSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLL-YLPVSTYSLLCATQL 149 (382)
Q Consensus 71 ~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~-ylp~St~sll~ssql 149 (382)
.+++-.++.|..|..+--..++..+. +. +|..++........|++.+..+.+|..+++ ++++++++++.+.++
T Consensus 176 ~~~~~~~~~~~~g~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~p 249 (290)
T TIGR00776 176 VDGLSVLLPQAIGMVIGGIIFNLGHI-LA-----KPLKKYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGV 249 (290)
T ss_pred CCcceehhHHHHHHHHHHHHHHHHHh-cc-----cchHHHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHH
Confidence 56777777787766665443333331 11 233333333445579999999999999999 999999999999999
Q ss_pred HHHHHHHHHHhcCccChhHH----HHHHHHHHHHHhheec
Q 016786 150 AFNAFFSFFLNSQKFTPFIF----NSLVLLTISATLLAVN 185 (382)
Q Consensus 150 ~Ftaifs~lilkek~t~~~i----~svvLl~~G~vll~~~ 185 (382)
+.+++++++++||+.+++++ .|.++.+.|+.+++..
T Consensus 250 via~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 250 IISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred HHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999 9999999999988653
No 46
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.92 E-value=0.0003 Score=66.19 Aligned_cols=205 Identities=17% Similarity=0.258 Sum_probs=121.4
Q ss_pred HHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCchhHHHHHHH
Q 016786 127 MMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCT 206 (382)
Q Consensus 127 ~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~~~iG~~l~ 206 (382)
+--+=+++|+|++.|++.--...+..|..-.++++.|.+-....+-+++.++.++-.++|...... ..+..-.|.+..
T Consensus 83 yt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~--~~~~lN~GY~Wm 160 (309)
T COG5070 83 YTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAF--KAQILNPGYLWM 160 (309)
T ss_pred HhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHH--HhcccCCceEEE
Confidence 334567899999999999999999999999999999999999999999999998866665421110 000011243333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHH-HHHHhcCCccccchhcccccccchhHHHHHHHH
Q 016786 207 LGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCV-VGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWT 285 (382)
Q Consensus 207 l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~-igl~~~g~~~~i~~e~~~f~~g~~~y~l~lv~~ 285 (382)
..-....+.+...+ ||.++-+.+. -.|-..|-.+.+.++++ ..++. .||+.- .-++.++. .
T Consensus 161 ~~NclssaafVL~m----rkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~-edws~~-n~annl~~-----------d 222 (309)
T COG5070 161 FTNCLSSAAFVLIM----RKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLF-EDWSPG-NLANNLSV-----------D 222 (309)
T ss_pred ehhhHhHHHHHHHH----HHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHh-ccCCcc-hhhcCCCh-----------H
Confidence 33333444433333 4443433322 23445566667766666 44444 466521 11233322 1
Q ss_pred HHHHHH-HHhhhhcceee-------ehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHh
Q 016786 286 AVTWQI-SSVGLLGLVFE-------VSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIY 351 (382)
Q Consensus 286 av~wq~-~~vgvvGl~~~-------~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y 351 (382)
++.|.. .++.-+|..+. +|+..-+.+-++-.....+.+.++|+|+.+..++.++.+-...-+.|.|
T Consensus 223 ~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYav 296 (309)
T COG5070 223 SLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAV 296 (309)
T ss_pred HHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHH
Confidence 122222 12334444443 2333333343333334457788999999999999998876655555544
No 47
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.90 E-value=0.00037 Score=67.99 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhhe
Q 016786 118 FGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLA 183 (382)
Q Consensus 118 ~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~ 183 (382)
.|+..+....+|..+++++|++..+++...+|++++++++++++|++++.++.|.++.+.|+.+.-
T Consensus 221 ~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 221 AAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence 345566677999999999999999999999999999999999999999999999999999988763
No 48
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.73 E-value=0.0013 Score=64.09 Aligned_cols=64 Identities=11% Similarity=0.114 Sum_probs=58.7
Q ss_pred HHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheec
Q 016786 122 LTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN 185 (382)
Q Consensus 122 ~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~ 185 (382)
....+.+|..+++++|++..+++...+|++++++++++++|++++.++.|.++.+.|+.++..+
T Consensus 223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3455689999999999999999999999999999999999999999999999999999887443
No 49
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.72 E-value=9.8e-05 Score=71.40 Aligned_cols=67 Identities=16% Similarity=0.320 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhh
Q 016786 116 VAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLL 182 (382)
Q Consensus 116 ~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll 182 (382)
...++..+..+.+|..+++++|++..+.+...+|++++++++++++|++++.++.|.++.++|+.++
T Consensus 215 ~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l~ 281 (281)
T TIGR03340 215 TLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL 281 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHhC
Confidence 3445656677789999999999999999999999999999999999999999999999999998763
No 50
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.64 E-value=0.0017 Score=63.37 Aligned_cols=69 Identities=10% Similarity=0.124 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhhe
Q 016786 115 YVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLA 183 (382)
Q Consensus 115 ~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~ 183 (382)
....|+..+.-+.+|..+++++|++..+++...+|+++.++++++++|++++.++.|.++..+|+.++.
T Consensus 216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 333455556667999999999999999999999999999999999999999999999999998888763
No 51
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.53 E-value=0.00055 Score=66.71 Aligned_cols=61 Identities=11% Similarity=-0.094 Sum_probs=55.8
Q ss_pred HHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhhee
Q 016786 124 GDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV 184 (382)
Q Consensus 124 ~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~ 184 (382)
.-|.++..++++++++++++....++++++++++++++|++|..++.|.++.+.|+.+...
T Consensus 233 ~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 233 FYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 3446777899999999999999999999999999999999999999999999999988643
No 52
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.45 E-value=0.021 Score=57.57 Aligned_cols=109 Identities=11% Similarity=0.143 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCchhHH-HHHHhhhHHHHHHHHHHHhcC-------ccChhHHHHHHHHHHHHH
Q 016786 109 STLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTY-SLLCATQLAFNAFFSFFLNSQ-------KFTPFIFNSLVLLTISAT 180 (382)
Q Consensus 109 ~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~-sll~ssql~Ftaifs~lilke-------k~t~~~i~svvLl~~G~v 180 (382)
.+.+......|++.+..|.++..+++|+-+|.. .+-...|++++.++..++++| +-...-+.++++.++|++
T Consensus 70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~ 149 (345)
T PRK13499 70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA 149 (345)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence 456777888999999999999999999988865 455678999999999999774 222457889999999999
Q ss_pred hhee----cCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 016786 181 LLAV----NADSENTSGVSKGNYVIGFLCTLGASATYSLYL 217 (382)
Q Consensus 181 ll~~----~~~~~~p~~~~~~~~~iG~~l~l~Aa~~~al~~ 217 (382)
+.+. .+.+++.++.++.+..-|+++.+.+.+.|++|.
T Consensus 150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 9877 433221111223455679999999999999987
No 53
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.38 E-value=0.0073 Score=58.95 Aligned_cols=63 Identities=11% Similarity=-0.024 Sum_probs=57.7
Q ss_pred HHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheec
Q 016786 123 TGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN 185 (382)
Q Consensus 123 ~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~ 185 (382)
+....+|..++++++++..+++...+|++++++++++++|++++.++.|.++.++|+.+...+
T Consensus 226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 445588999999999999999999999999999999999999999999999999999886544
No 54
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.37 E-value=0.00057 Score=67.34 Aligned_cols=69 Identities=17% Similarity=0.215 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCCC
Q 016786 120 LLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADS 188 (382)
Q Consensus 120 ll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~~ 188 (382)
++++..+..=+.|+.|-|++..+=+-+.+++++++++..++|||++..-.+|.++.++|..++..+...
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~ 140 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPK 140 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCc
Confidence 455666666668889999999999999999999999999999999999999999999999988776543
No 55
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.33 E-value=0.0019 Score=54.22 Aligned_cols=64 Identities=14% Similarity=0.170 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhhhccCchhH-HHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhhee
Q 016786 121 LLTGDNMMYSYGLLYLPVST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV 184 (382)
Q Consensus 121 l~~~~n~Ly~~gl~ylp~St-~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~ 184 (382)
.+.....+.+.+++++|.++ |++-.....+-+++.++++++|++++.++.++.+.+.|++.+-.
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 34566678889999999997 68888889999999999999999999999999999999998743
No 56
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.32 E-value=0.002 Score=55.29 Aligned_cols=67 Identities=13% Similarity=0.251 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhhhccCchhHHH-HHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecC
Q 016786 120 LLLTGDNMMYSYGLLYLPVSTYS-LLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA 186 (382)
Q Consensus 120 ll~~~~n~Ly~~gl~ylp~St~s-ll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~ 186 (382)
+.++...++++.+++++|.|++- +......+.+++.++++++|++++.++.++.+.++|++++-..+
T Consensus 38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 44466668888999999999854 44679999999999999999999999999999999999875443
No 57
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.21 E-value=0.002 Score=56.00 Aligned_cols=64 Identities=14% Similarity=0.143 Sum_probs=56.3
Q ss_pred HHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHH--HhcCccChhHHHHHHHHHHHHHhheec
Q 016786 122 LTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFF--LNSQKFTPFIFNSLVLLTISATLLAVN 185 (382)
Q Consensus 122 ~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~l--ilkek~t~~~i~svvLl~~G~vll~~~ 185 (382)
++....+|.++++..|+|.+.-+.+....++++.++. +++|++|+.++.|+++.++|+.++..+
T Consensus 58 ~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 58 YALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 3455588999999999999998888888888888885 899999999999999999999998544
No 58
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.20 E-value=0.0029 Score=53.41 Aligned_cols=62 Identities=18% Similarity=0.150 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhhhccCchhH-HHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhh
Q 016786 121 LLTGDNMMYSYGLLYLPVST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLL 182 (382)
Q Consensus 121 l~~~~n~Ly~~gl~ylp~St-~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll 182 (382)
.++...++.+.+++++|.++ |++-.....+.+++.++++.||++++.++.++.+.+.|++.+
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 33556677789999999997 577777899999999999999999999999999999999886
No 59
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.18 E-value=0.0034 Score=52.70 Aligned_cols=62 Identities=19% Similarity=0.222 Sum_probs=54.7
Q ss_pred HHHHHHHHHhhhccCchhH-HHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhhe
Q 016786 122 LTGDNMMYSYGLLYLPVST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLA 183 (382)
Q Consensus 122 ~~~~n~Ly~~gl~ylp~St-~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~ 183 (382)
++...++.+.+++.+|.++ |++-.....+.+++.++++.||++++.++.++.+.++|++.+-
T Consensus 39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3555677779999999987 5777779999999999999999999999999999999999873
No 60
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.13 E-value=0.0026 Score=52.34 Aligned_cols=49 Identities=20% Similarity=0.294 Sum_probs=40.4
Q ss_pred ehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHh
Q 016786 303 VSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIY 351 (382)
Q Consensus 303 ~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y 351 (382)
.+....+.+....++++.+++++++||++++.+++|.++++.|.....|
T Consensus 78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~~ 126 (126)
T PF00892_consen 78 ISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIST 126 (126)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 3445566667777778899999999999999999999999998877553
No 61
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.03 E-value=0.021 Score=57.34 Aligned_cols=64 Identities=14% Similarity=0.047 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhh
Q 016786 119 GLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLL 182 (382)
Q Consensus 119 Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll 182 (382)
|+.....|..-.++++.+++.++++....+++++.++++++++|++|+.++.|.++.+.|+.+.
T Consensus 283 ~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 283 GVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence 4444444433336999999999999999999999999999999999999999999999999875
No 62
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=96.96 E-value=0.02 Score=54.42 Aligned_cols=138 Identities=17% Similarity=0.194 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccchh--HH
Q 016786 202 GFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVS--YL 279 (382)
Q Consensus 202 G~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~~~--y~ 279 (382)
|.++.+.|+++||...+..+.. .. ..+.|+..+=.+++.+++..-+...++.++..+..+..++.+.. ..
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~~-~~-------~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKLL-KP-------LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLL 74 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHh-cc-------CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHH
Confidence 8899999999999977777542 11 23566777777777766554443333322111100111111111 11
Q ss_pred HHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHh
Q 016786 280 MTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIY 351 (382)
Q Consensus 280 l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y 351 (382)
+.-+...+.|.....+ ..+++...++++....+..+.+++.++++|+++..+++|+++.+.|+..-..
T Consensus 75 ~~g~~~~~~~~~~~~a----~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 75 LCGLLIGFNWWLFIWA----VNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred HHHHHHHHHHHHHHHH----HHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 1111122233332222 1233444566666666667899999999999999999999999999876543
No 63
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.95 E-value=0.0068 Score=51.24 Aligned_cols=64 Identities=9% Similarity=0.181 Sum_probs=54.7
Q ss_pred HHHHHHHHHhhhccCchhHHH-HHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheec
Q 016786 122 LTGDNMMYSYGLLYLPVSTYS-LLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN 185 (382)
Q Consensus 122 ~~~~n~Ly~~gl~ylp~St~s-ll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~ 185 (382)
++....+++.+++.+|.|++- +-.....+.+++.++++++|++++.++.++.+.++|++++...
T Consensus 40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 355557778999999999754 4466899999999999999999999999999999999998443
No 64
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=96.91 E-value=0.044 Score=51.62 Aligned_cols=71 Identities=20% Similarity=0.329 Sum_probs=61.2
Q ss_pred HHHHHHHHH-HHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheec
Q 016786 115 YVAFGLLLT-GDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN 185 (382)
Q Consensus 115 ~~~~Gll~~-~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~ 185 (382)
....|++.. ....+|..+++..|++..+.+..+++++++++++++++|++++.++.|+++.+.|+.+...+
T Consensus 217 ~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 217 LLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 334455555 35688889999999999999999999999999999999999999999999999998887433
No 65
>COG2510 Predicted membrane protein [Function unknown]
Probab=96.47 E-value=0.023 Score=49.33 Aligned_cols=129 Identities=13% Similarity=0.218 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccchhHHH--
Q 016786 203 FLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLM-- 280 (382)
Q Consensus 203 ~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~~~y~l-- 280 (382)
.+.++.+|+.+|+--..++...|.+ ..+. -...-.++...++..-++..|.|+ .+.| . +.+...++
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~------At~IRtiVi~~~l~~v~~~~g~~~-~~~~---~-~~k~~lflil 72 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGV-DPDF------ATTIRTIVILIFLLIVLLVTGNWQ-AGGE---I-GPKSWLFLIL 72 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-CccH------HHHHHHHHHHHHHHHHHHhcCcee-cccc---c-CcceehhhhH
Confidence 3567788888888666665555543 1111 111113444555555566777765 3322 2 11222223
Q ss_pred HHHHHHHHHHHHHhh-hhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Q 016786 281 TLIWTAVTWQISSVG-LLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLS 348 (382)
Q Consensus 281 ~lv~~av~wq~~~vg-vvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~ 348 (382)
.=+.+..+|++++.. -.|-... .-=++...+.++.++++++++|++|..+.+|.+++++|...
T Consensus 73 SGla~glswl~Yf~ALk~G~as~-----VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gail 136 (140)
T COG2510 73 SGLAGGLSWLLYFRALKKGKASR-----VVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAIL 136 (140)
T ss_pred HHHHHHHHHHHHHHHHhcCCcce-----EEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence 234445788886543 1111111 00013444567799999999999999999999999988653
No 66
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=96.29 E-value=0.057 Score=45.10 Aligned_cols=47 Identities=21% Similarity=0.400 Sum_probs=39.2
Q ss_pred HHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhhcc
Q 016786 308 SNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQHY 354 (382)
Q Consensus 308 a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~~~ 354 (382)
...+....+.++.+++.++|+|+++..+++|.++++.|+..-.+++.
T Consensus 63 v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 63 VAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 34445555557799999999999999999999999999999888654
No 67
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.24 E-value=0.09 Score=53.01 Aligned_cols=116 Identities=13% Similarity=0.088 Sum_probs=80.8
Q ss_pred CCCchhhHHHHHHhhHHHHH----HHHhhhc--cCCC---CCC--CCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCc
Q 016786 69 GGNSKWMATFVQSAGFPILL----PILCCFS--NGSR---SAN--TTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLP 137 (382)
Q Consensus 69 gg~~~w~~t~vq~agfplll----~~~~~~~--~~~~---~~~--~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp 137 (382)
.|..++-+.+.|.+|.-+=. +.++... ++++ ..+ .++|.+.|-.+.+++.|++...+|..|..|-..++
T Consensus 206 ~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g 285 (345)
T PRK13499 206 LGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLG 285 (345)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 56777878888877444322 2222221 1111 011 23444556778889999999999999999888875
Q ss_pred hhHHHH---HH-hhhHHHHHHHHHHHhcCccC------hhHHHHHHHHHHHHHhheec
Q 016786 138 VSTYSL---LC-ATQLAFNAFFSFFLNSQKFT------PFIFNSLVLLTISATLLAVN 185 (382)
Q Consensus 138 ~St~sl---l~-ssql~Ftaifs~lilkek~t------~~~i~svvLl~~G~vll~~~ 185 (382)
+++..+ +. |+.+++..+-+. ++||+=+ +..+.++++.++|.++++.+
T Consensus 286 ~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 286 AQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred CccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 554444 44 888899999888 5998877 77889999999999998765
No 68
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.14 E-value=0.018 Score=53.65 Aligned_cols=62 Identities=19% Similarity=0.247 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHH
Q 016786 119 GLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISAT 180 (382)
Q Consensus 119 Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~v 180 (382)
.+..+....+.++-++|.+..+.++..++..++++++++++++++++..++.|+.+.+.|+.
T Consensus 159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~ 220 (222)
T TIGR00803 159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF 220 (222)
T ss_pred HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence 45556666778899999999999999999999999999999999999999999999887754
No 69
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.10 E-value=0.02 Score=46.65 Aligned_cols=54 Identities=13% Similarity=0.078 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhhhccCchhHH-HHHHhhhHHHHHHHHHHHhcCccChhHHHHHHH
Q 016786 121 LLTGDNMMYSYGLLYLPVSTY-SLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVL 174 (382)
Q Consensus 121 l~~~~n~Ly~~gl~ylp~St~-sll~ssql~Ftaifs~lilkek~t~~~i~svvL 174 (382)
.++...++++.+++++|.|+. .+......+.+++.+.++.+|++|+.++.++.+
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 446666899999999999987 667779999999999999999999999999876
No 70
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=95.93 E-value=0.036 Score=53.39 Aligned_cols=74 Identities=15% Similarity=0.178 Sum_probs=59.9
Q ss_pred hhHHHHHHHHHHHHHHHHH-HHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHh
Q 016786 108 ISTLVCLYVAFGLLLTGDN-MMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATL 181 (382)
Q Consensus 108 ~~~l~~~~~~~Gll~~~~n-~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vl 181 (382)
.+.++......|++...-- .+=..++..+|.++|+++.+.+|++.++-.+++++|.+|..||.+++..+.+++=
T Consensus 205 ~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG 279 (292)
T COG5006 205 SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG 279 (292)
T ss_pred ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence 3455555555555544433 5556889999999999999999999999999999999999999999988877663
No 71
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=95.84 E-value=0.15 Score=49.87 Aligned_cols=128 Identities=17% Similarity=0.359 Sum_probs=76.6
Q ss_pred HhhhhhHHHHHHHHHhcCCCchh-hHHHHHHhhHHHHHHHHhhhccCCCCCC----CCCChhhHHHHHHHHHHHHHHHHH
Q 016786 52 LVGQSAATLLGRLYYDKGGNSKW-MATFVQSAGFPILLPILCCFSNGSRSAN----TTDPKISTLVCLYVAFGLLLTGDN 126 (382)
Q Consensus 52 ~~g~~~~~Ll~r~y~~~gg~~~w-~~t~vq~agfplll~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~Gll~~~~n 126 (382)
+..+.-+..--|. +++.+.++| +.-.....+.|++++.....+...-++. ...|.....++....+|. ..++
T Consensus 164 ~~~a~~~~~qe~~-~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~--~g~~ 240 (303)
T PF08449_consen 164 LLDAFTGVYQEKL-FKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGA--LGQF 240 (303)
T ss_pred HHHHHHHHHHHHH-HHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHH--HHHH
Confidence 3333344444444 444445553 2233455566666655554221000000 112222222233233333 3333
Q ss_pred HHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhhe
Q 016786 127 MMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLA 183 (382)
Q Consensus 127 ~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~ 183 (382)
..+ .-.+...+-+.+++..+.-+++.++|+++.++++++.+|.|+++.+.|..+-.
T Consensus 241 ~i~-~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~ 296 (303)
T PF08449_consen 241 FIF-YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYS 296 (303)
T ss_pred HHH-HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHH
Confidence 444 45677889999999999999999999999999999999999999999988753
No 72
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=95.71 E-value=0.16 Score=49.80 Aligned_cols=136 Identities=20% Similarity=0.226 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccchhHH
Q 016786 200 VIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYL 279 (382)
Q Consensus 200 ~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~~~y~ 279 (382)
.-|+++.++|..+||. .-..+|-+ + .....|+..+=-+++.++.++-+...+.++++.. ..++.+....
T Consensus 6 ~~Gil~~l~Ay~lwG~----lp~y~kll-~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~---~~~~p~~~~~ 74 (293)
T COG2962 6 RKGILLALLAYLLWGL----LPLYFKLL-E---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ---LLKQPKTLLM 74 (293)
T ss_pred cchhHHHHHHHHHHHH----HHHHHHHH-c---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH---HHhCcHHHHH
Confidence 3499999999999999 33333332 2 2235677777777888888777777677665532 2333222111
Q ss_pred H--HHHHHHHHHHHHH-hhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHh
Q 016786 280 M--TLIWTAVTWQISS-VGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIY 351 (382)
Q Consensus 280 l--~lv~~av~wq~~~-vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y 351 (382)
. +-.-...+|-++. .--.|.+-. ++.=..+-+.+..+++.++|+|+++..|.++.+++.+|+..-..
T Consensus 75 ~~l~a~li~~nW~lfiWAvn~g~~le-----aSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 75 LALTALLIGLNWWLFIWAVNNGHVLE-----ASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHHHHHHHHHHHHHhheecCCCchhH-----HHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 1 2222224565532 222233332 33334444446699999999999999999999999999887643
No 73
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=95.51 E-value=0.21 Score=48.65 Aligned_cols=104 Identities=22% Similarity=0.162 Sum_probs=75.3
Q ss_pred CCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhh
Q 016786 69 GGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQ 148 (382)
Q Consensus 69 gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssq 148 (382)
.+-++|-.-+-|..|.-+--..+.+...++. ..+..+ --...|++.+..|+.|.++.+..-++++-.+.|+.
T Consensus 160 ~~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~---~~k~~~-----~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~ 231 (269)
T PF06800_consen 160 FHVSGWSAFLPQAIGMLIGAFIFNLFSKKPF---FEKKSW-----KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLG 231 (269)
T ss_pred cCCChhHhHHHHHHHHHHHHHHHhhcccccc---cccchH-----HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHH
Confidence 4456777778899998776554444321110 111112 23455999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCccChhHHH----HHHHHHHHHH
Q 016786 149 LAFNAFFSFFLNSQKFTPFIFN----SLVLLTISAT 180 (382)
Q Consensus 149 l~Ftaifs~lilkek~t~~~i~----svvLl~~G~v 180 (382)
++.+.+.+.+++|||=+++++. ++++.++|.+
T Consensus 232 vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 232 VVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 9999999999999998887654 4444444443
No 74
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=94.44 E-value=2 Score=37.59 Aligned_cols=104 Identities=22% Similarity=0.228 Sum_probs=66.5
Q ss_pred chhhHHHH-HHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHH-HHHHhhhH
Q 016786 72 SKWMATFV-QSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTY-SLLCATQL 149 (382)
Q Consensus 72 ~~w~~t~v-q~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~-sll~ssql 149 (382)
+||.++++ ...|+..++..+++.+.++.++-++.| +.....-.+|.... .+..+....+.++.. .+....|+
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p---~w~~lGG~lG~~~V---~~~~~~vp~lG~~~~~~l~~~GQl 102 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVP---WWAYLGGLLGVFFV---LSNIILVPRLGAALTTILIVAGQL 102 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCC---hHHhccHHHHHHHH---HHHHHHhhhhhHHHHHHHHHHHHH
Confidence 57777665 556777777666665432111112233 22222333333322 334455666666554 45677899
Q ss_pred HHHHHHHHH----HhcCccChhHHHHHHHHHHHHHh
Q 016786 150 AFNAFFSFF----LNSQKFTPFIFNSLVLLTISATL 181 (382)
Q Consensus 150 ~Ftaifs~l----ilkek~t~~~i~svvLl~~G~vl 181 (382)
+..++.-.+ .-|+++++.++.+++++++|+.+
T Consensus 103 ~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 103 IASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 999999997 68999999999999999999864
No 75
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=94.38 E-value=0.012 Score=56.41 Aligned_cols=147 Identities=20% Similarity=0.188 Sum_probs=101.5
Q ss_pred hcCCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHH-HH
Q 016786 67 DKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSL-LC 145 (382)
Q Consensus 67 ~~gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sl-l~ 145 (382)
++-|.+|-=|++=+|.|--+..+..+++..+ -.+.+.+++....|++.+..+..-.-|.+++.+|-+.= -.
T Consensus 22 ~k~GG~p~qQ~lGtT~GALifaiiv~~~~~p--------~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiSt 93 (288)
T COG4975 22 NKFGGKPYQQTLGTTLGALIFAIIVFLFVSP--------ELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPIST 93 (288)
T ss_pred eecCCChhHhhhhccHHHHHHHHHHheeecC--------ccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccc
Confidence 3456777778887777766655555554321 13557888999999999998876666777655544332 23
Q ss_pred hhhHHHHHHHHHHHhcCccChhHH----HHHHHHHHHHHhheecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 016786 146 ATQLAFNAFFSFFLNSQKFTPFIF----NSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQ 221 (382)
Q Consensus 146 ssql~Ftaifs~lilkek~t~~~i----~svvLl~~G~vll~~~~~~~~p~~~~~~~~~iG~~l~l~Aa~~~al~~~l~q 221 (382)
.+|++-+.+|+++.++|=-+..|+ .++++..+|+.+-+..+..++..+ +.+++--|+...+.+++.|-.|.++.|
T Consensus 94 G~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~-~~~n~kkgi~~L~iSt~GYv~yvvl~~ 172 (288)
T COG4975 94 GMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEE-NPSNLKKGIVILLISTLGYVGYVVLFQ 172 (288)
T ss_pred hhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccccc-ChHhhhhheeeeeeeccceeeeEeeec
Confidence 679999999999999998888775 477888888888766665432211 222355688888888888887666654
Q ss_pred H
Q 016786 222 L 222 (382)
Q Consensus 222 ~ 222 (382)
.
T Consensus 173 ~ 173 (288)
T COG4975 173 L 173 (288)
T ss_pred c
Confidence 3
No 76
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=94.15 E-value=1 Score=45.29 Aligned_cols=117 Identities=15% Similarity=0.096 Sum_probs=84.2
Q ss_pred hcCCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHh
Q 016786 67 DKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCA 146 (382)
Q Consensus 67 ~~gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~s 146 (382)
.++-++.=+..++..-|+.+..+...+..++.- +.-++..+...+.+.-.+.+.....+....+++.++...++=..
T Consensus 191 v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i---~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLL 267 (334)
T PF06027_consen 191 VKKAPRVEFLGMLGLFGFIISGIQLAILERSGI---ESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLL 267 (334)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHheehhhh---hccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHH
Confidence 334455666788888999888877666543211 11122233344444444545555556677788888888888888
Q ss_pred hhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecC
Q 016786 147 TQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA 186 (382)
Q Consensus 147 sql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~ 186 (382)
+.-++++++..++.++++++.-+.|.++..+|.++...++
T Consensus 268 Tsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 268 TSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 8999999999999999999999999999999999976554
No 77
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=93.81 E-value=0.13 Score=43.77 Aligned_cols=63 Identities=14% Similarity=0.185 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhhhccCchhHHHHH-HhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhh
Q 016786 120 LLLTGDNMMYSYGLLYLPVSTYSLL-CATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLL 182 (382)
Q Consensus 120 ll~~~~n~Ly~~gl~ylp~St~sll-~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll 182 (382)
++......+|.+.+...|.|...-+ +++.-+||++.++++-+|..++..+.|+++...|+.+.
T Consensus 49 ~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 49 LLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 3444455888899999999988877 59999999999999999999999999999999998763
No 78
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=93.43 E-value=1.5 Score=38.09 Aligned_cols=33 Identities=12% Similarity=0.263 Sum_probs=26.7
Q ss_pred HHHHHHHH--HHhcCcchHHHHHHHHHHHHHHHHH
Q 016786 317 PVIPILAV--IFFHDKMNGLKAIAMLLAIWGFLSY 349 (382)
Q Consensus 317 pl~~ilav--i~fgE~~~~~kiig~~L~l~G~~~y 349 (382)
..+.++++ ++|||++++.|++|+++++.|+...
T Consensus 86 ~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv 120 (129)
T PRK02971 86 ALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLI 120 (129)
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 34455565 3899999999999999999887774
No 79
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=92.81 E-value=0.77 Score=38.63 Aligned_cols=35 Identities=17% Similarity=0.278 Sum_probs=30.8
Q ss_pred hhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Q 016786 314 LSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLS 348 (382)
Q Consensus 314 ~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~ 348 (382)
+....+.++++++|||++++.|++|+++++.|+..
T Consensus 72 l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~ 106 (111)
T PRK15051 72 LNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVI 106 (111)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 44457789999999999999999999999999765
No 80
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=92.56 E-value=0.51 Score=39.86 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=31.0
Q ss_pred hhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Q 016786 315 SLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSY 349 (382)
Q Consensus 315 ~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y 349 (382)
....+.+.++++|+|++++.|++|+.+++.|+..-
T Consensus 67 G~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l 101 (110)
T PRK09541 67 GIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVI 101 (110)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 44566899999999999999999999999888775
No 81
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=92.12 E-value=0.57 Score=40.26 Aligned_cols=36 Identities=14% Similarity=0.385 Sum_probs=31.1
Q ss_pred hhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Q 016786 314 LSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSY 349 (382)
Q Consensus 314 ~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y 349 (382)
+....+.+.++++|||++++.|++|+.+++.|+..-
T Consensus 66 iG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l 101 (120)
T PRK10452 66 IGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI 101 (120)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh
Confidence 344566889999999999999999999999988664
No 82
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=91.67 E-value=0.74 Score=45.53 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=33.0
Q ss_pred HhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHh
Q 016786 313 TLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIY 351 (382)
Q Consensus 313 ~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y 351 (382)
.+.++...+++-.++||+++....+|.++++.|....+.
T Consensus 84 ~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 84 ALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred hhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 344466789999999999999999999999999887643
No 83
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=91.34 E-value=1 Score=38.00 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=30.4
Q ss_pred hhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Q 016786 314 LSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLS 348 (382)
Q Consensus 314 ~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~ 348 (382)
+....+.+.++++|||++++.|++|+.+++.|+..
T Consensus 71 iG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~ 105 (109)
T PRK10650 71 FGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVM 105 (109)
T ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 34466788999999999999999999999998865
No 84
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=91.10 E-value=5.2 Score=40.34 Aligned_cols=167 Identities=14% Similarity=0.194 Sum_probs=103.3
Q ss_pred HHHHHHHHHhhhhhHHHHHHHH--HhcCCCchhhHHHHHHhhHHHHHHHHhhhccCCCC-CC--CCCChhhHHHHHHHHH
Q 016786 44 VILYVVCLLVGQSAATLLGRLY--YDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRS-AN--TTDPKISTLVCLYVAF 118 (382)
Q Consensus 44 ~~~~~~~~~~g~~~~~Ll~r~y--~~~gg~~~w~~t~vq~agfplll~~~~~~~~~~~~-~~--~~~~~~~~l~~~~~~~ 118 (382)
+++-+++-.+|+.++.. +| |++-.+=.|=+.|+-..=|.-++.|+......-+. .+ ...|. ..+...+..
T Consensus 5 ii~Gii~h~iGg~~~~s---fy~P~kkvk~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~--~~l~~~~l~ 79 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGS---FYVPFKKVKGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPA--STLFWTFLF 79 (344)
T ss_pred HHHHHHHHHHHHHHhhh---hccchhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCCh--hHHHHHHHH
Confidence 34555555666544432 33 34444557888888877777777776654322111 00 11221 133445667
Q ss_pred HHHHHHHHHHHHhhhccCchhH-HHHHHhhhHHHHHHHHHHHhc-------CccChhHHHHHHHHHHHHHhheecCC---
Q 016786 119 GLLLTGDNMMYSYGLLYLPVST-YSLLCATQLAFNAFFSFFLNS-------QKFTPFIFNSLVLLTISATLLAVNAD--- 187 (382)
Q Consensus 119 Gll~~~~n~Ly~~gl~ylp~St-~sll~ssql~Ftaifs~lilk-------ek~t~~~i~svvLl~~G~vll~~~~~--- 187 (382)
|++.+..++.|-.+++|+-.|. +++...+-.+|-.+.--++.+ ++-.+..+.++++.++|+++++....
T Consensus 80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke 159 (344)
T PF06379_consen 80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE 159 (344)
T ss_pred HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence 9999999999999999988764 455555555565555444432 33456889999999999999864321
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 016786 188 SENTSGVSKGNYVIGFLCTLGASATYSL 215 (382)
Q Consensus 188 ~~~p~~~~~~~~~iG~~l~l~Aa~~~al 215 (382)
.+...+.++.+...|+++++.+-++++.
T Consensus 160 ~~~~~~~~efn~~kGl~iAv~sGv~Sa~ 187 (344)
T PF06379_consen 160 KELGEEAKEFNFKKGLIIAVLSGVMSAC 187 (344)
T ss_pred hhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 1212233444556799999998777776
No 85
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=90.40 E-value=0.82 Score=38.49 Aligned_cols=36 Identities=14% Similarity=0.405 Sum_probs=31.4
Q ss_pred hhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Q 016786 314 LSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSY 349 (382)
Q Consensus 314 ~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y 349 (382)
+....+.+.++++|+|+++..|++|+.+++.|...-
T Consensus 66 iG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 66 IGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred HHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 344677899999999999999999999999998754
No 86
>PRK11431 multidrug efflux system protein; Provisional
Probab=89.83 E-value=1.3 Score=37.10 Aligned_cols=36 Identities=8% Similarity=0.271 Sum_probs=31.1
Q ss_pred hhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Q 016786 314 LSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSY 349 (382)
Q Consensus 314 ~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y 349 (382)
+....+.+.++++|||++++.|++|+.+++.|+..-
T Consensus 65 iG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 65 IGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 444667889999999999999999999999988764
No 87
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=88.72 E-value=13 Score=37.64 Aligned_cols=151 Identities=16% Similarity=0.196 Sum_probs=95.9
Q ss_pred cccchhHHHHHHHHHHHHhhhhhHHHHHHHH---HhcCCCchhhHHH-----HHHhhHHHHHHHHhhhccCC-CC----C
Q 016786 35 LKHYKWWLRVILYVVCLLVGQSAATLLGRLY---YDKGGNSKWMATF-----VQSAGFPILLPILCCFSNGS-RS----A 101 (382)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~g~~~~~Ll~r~y---~~~gg~~~w~~t~-----vq~agfplll~~~~~~~~~~-~~----~ 101 (382)
.++.++=+++++-+..|-.+...+-=-++-- =.+.|..++.+++ +...||-.-+. +++.+..+ ++ .
T Consensus 168 efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~-yc~~~l~~~k~~s~~~ 246 (344)
T PF06379_consen 168 EFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLI-YCLILLAKNKNWSWKG 246 (344)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHH-HHHHHHhhcCCCcccc
Confidence 3455556777666655554433322111111 1235677887775 55667766653 44333211 11 1
Q ss_pred C--CCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCc----hhHHHHHHhhhHHHHHHHHHHHh-----cCccChhHHH
Q 016786 102 N--TTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLP----VSTYSLLCATQLAFNAFFSFFLN-----SQKFTPFIFN 170 (382)
Q Consensus 102 ~--~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp----~St~sll~ssql~Ftaifs~lil-----kek~t~~~i~ 170 (382)
+ ..+|...+-...+++.|.+.-.++..|..|=..++ .+...+..++.++|.-+-..++- .+|--+.-+.
T Consensus 247 d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~lkEWKg~s~kt~~vl~~ 326 (344)
T PF06379_consen 247 DYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLILKEWKGASKKTIRVLVL 326 (344)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHH
Confidence 2 23454556667888999999999999999988877 66788888888888887777553 2355566788
Q ss_pred HHHHHHHHHHhheecC
Q 016786 171 SLVLLTISATLLAVNA 186 (382)
Q Consensus 171 svvLl~~G~vll~~~~ 186 (382)
++.+++++++++|.+.
T Consensus 327 G~~vlI~s~~ivG~G~ 342 (344)
T PF06379_consen 327 GIAVLILSVVIVGYGM 342 (344)
T ss_pred HHHHHHHHHHHHhccc
Confidence 8888888888887653
No 88
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=87.07 E-value=20 Score=31.31 Aligned_cols=125 Identities=16% Similarity=0.045 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHHHHHHhcCCccccchhcccccccchhHHHH-
Q 016786 203 FLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMT- 281 (382)
Q Consensus 203 ~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~igl~~~g~~~~i~~e~~~f~~g~~~y~l~- 281 (382)
.++++.+-+.-+++..+.-+..++.. .+++-..+...++++.+.+-.+..++. + .+.+.+-++.+++.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g------s~~~as~i~~~~G~i~~~i~~~~~~~~-~----~~~~~~~p~w~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG------SPLVASFISFGVGFILLLIILLITGRP-S----LASLSSVPWWAYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC------ccHHHHHHHHHHHHHHHHHHHHHhccc-c----cchhccCChHHhccH
Confidence 45667777777776666666666541 144444455556777777666555542 2 23354445544441
Q ss_pred HHHHHHHHHH-HHhhhhcceeeehhhhHHHHHHhhhHHHHHHHHHHhc--------CcchHHHHHHHHHHHHHHH
Q 016786 282 LIWTAVTWQI-SSVGLLGLVFEVSSLFSNVISTLSLPVIPILAVIFFH--------DKMNGLKAIAMLLAIWGFL 347 (382)
Q Consensus 282 lv~~av~wq~-~~vgvvGl~~~~ssl~a~vv~~~~lpl~~ilavi~fg--------E~~~~~kiig~~L~l~G~~ 347 (382)
+....+.... ..+...| .+....+.+.-..+.+.++-| +++++.|++|.++.+.|..
T Consensus 72 ~lG~~~V~~~~~~vp~lG---------~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLG---------AALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred HHHHHHHHHHHHHhhhhh---------HHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 1111111111 1111111 111111222222555666554 8999999999999998874
No 89
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=87.01 E-value=1.4 Score=42.38 Aligned_cols=64 Identities=14% Similarity=0.033 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhh
Q 016786 119 GLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLL 182 (382)
Q Consensus 119 Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll 182 (382)
++...+.+++.+.-+.+-.+-+-|++..+.=+||.+.|+++.+..++.+||++-++.+.+..+-
T Consensus 248 ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 248 AIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 4444555555557777777778889999999999999999999999999999999999887664
No 90
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=82.74 E-value=26 Score=33.46 Aligned_cols=118 Identities=12% Similarity=0.060 Sum_probs=69.1
Q ss_pred HHhhhhhHHHHHHHHHhcCCCchhhHHHHH-HhhHHHHHHHHhhhccCC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q 016786 51 LLVGQSAATLLGRLYYDKGGNSKWMATFVQ-SAGFPILLPILCCFSNGS-RSANTTDPKISTLVCLYVAFGLLLTGDNMM 128 (382)
Q Consensus 51 ~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq-~agfplll~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~Gll~~~~n~L 128 (382)
.++.+.+++...|+.=+ .+.+.|++.... ..|.+..++..++....+ ++........+..+.. =++.+...++
T Consensus 123 ~~~S~~agVy~E~~lK~-~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~----i~~~a~gGll 197 (244)
T PF04142_consen 123 AFLSGFAGVYFEKLLKR-SNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIV----IFLQAIGGLL 197 (244)
T ss_pred HHHHHHHHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHH----HHHHHHhhHH
Confidence 34444555555555443 337888887654 445555555433322111 1111111111111111 1233334466
Q ss_pred HHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHH
Q 016786 129 YSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLV 173 (382)
Q Consensus 129 y~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svv 173 (382)
-+.-++|.+.=+=..-.+...+.|+++++++++.+++..-..|.+
T Consensus 198 va~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~ 242 (244)
T PF04142_consen 198 VAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA 242 (244)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence 667788888888888889999999999999999999998877754
No 91
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=81.79 E-value=0.99 Score=43.56 Aligned_cols=104 Identities=19% Similarity=0.192 Sum_probs=75.6
Q ss_pred hhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHH
Q 016786 73 KWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFN 152 (382)
Q Consensus 73 ~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ft 152 (382)
-|-.=+=|..|+.+....+=..+..+ ...|-...-...|++.+..|+.+.++-+..-++|.=-+.|...+.+
T Consensus 178 g~saiLPqAiGMv~~ali~~~~~~~~--------~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViis 249 (288)
T COG4975 178 GLSAILPQAIGMVIGALILGFFKMEK--------RFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIIS 249 (288)
T ss_pred chhhhhHHHHHHHHHHHHHhhccccc--------chHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeee
Confidence 35555668888888765443332111 1123334455679999999988878888888888888999999999
Q ss_pred HHHHHHHhcCccChhHH----HHHHHHHHHHHhhee
Q 016786 153 AFFSFFLNSQKFTPFIF----NSLVLLTISATLLAV 184 (382)
Q Consensus 153 aifs~lilkek~t~~~i----~svvLl~~G~vll~~ 184 (382)
.+-..+++|||=|++++ .++++..+|+++++.
T Consensus 250 TiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~ 285 (288)
T COG4975 250 TIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI 285 (288)
T ss_pred ecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence 99999999999998875 566777777777653
No 92
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=75.71 E-value=14 Score=35.67 Aligned_cols=89 Identities=21% Similarity=0.357 Sum_probs=51.9
Q ss_pred HHHHhhhccC----chhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecC-CCCCCCCCCCchhHH
Q 016786 127 MMYSYGLLYL----PVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA-DSENTSGVSKGNYVI 201 (382)
Q Consensus 127 ~Ly~~gl~yl----p~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~-~~~~p~~~~~~~~~i 201 (382)
++| +|+.-. =..+-++=+-.|.++..+|-+.=-||| +...+..+.+..+|+.++.... ..| + .++...+
T Consensus 55 Wl~-YG~~~~~d~llitIN~~G~~ie~~Yi~~f~~ya~~k~-~~~~~~~~~~~~~~~~i~~~~~~~~~-~---~~~~~~l 128 (243)
T KOG1623|consen 55 WLY-YGLLKVHDYLLITINGIGLVIETVYISIFLYYAPKKK-TVKIVLALVLGVIGLIILLTLLLFHD-P---ERRVSVL 128 (243)
T ss_pred HHH-hhhhccCceEEEEEehhcHHHHHHHHHHHheecCchh-eeEeeehHHHHHHHHHHHHHHHhcCC-c---ceeeeee
Confidence 666 774433 222233334457788888888777887 4444555555555555432111 111 1 2334678
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 016786 202 GFLCTLGASATYSLYLSLLQ 221 (382)
Q Consensus 202 G~~l~l~Aa~~~al~~~l~q 221 (382)
|.+|+...-..||.=+...+
T Consensus 129 G~vc~~~nI~~~~sPL~~m~ 148 (243)
T KOG1623|consen 129 GIVCAVFNISMFAAPLSVIR 148 (243)
T ss_pred ehhhhhhhHHhhhccHHhhh
Confidence 99999998888888555553
No 93
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=75.66 E-value=10 Score=37.86 Aligned_cols=63 Identities=13% Similarity=-0.011 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhh
Q 016786 120 LLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLL 182 (382)
Q Consensus 120 ll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll 182 (382)
+...+.|+.-..-+..+++=|+++....+-.+....++++++++.|+.++.|..++++|+.+-
T Consensus 243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y 305 (316)
T KOG1441|consen 243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLY 305 (316)
T ss_pred HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHH
Confidence 555566666659999999999999999999999999999999999999999999999999985
No 94
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=75.58 E-value=4.3 Score=32.88 Aligned_cols=27 Identities=19% Similarity=0.337 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHhcCcchHHHHHHHHHH
Q 016786 316 LPVIPILAVIFFHDKMNGLKAIAMLLA 342 (382)
Q Consensus 316 lpl~~ilavi~fgE~~~~~kiig~~L~ 342 (382)
...+.+.++++|||++|..|++|+.++
T Consensus 67 ~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 67 IVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 356688899999999999999999874
No 95
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=71.36 E-value=32 Score=35.28 Aligned_cols=65 Identities=5% Similarity=0.174 Sum_probs=58.9
Q ss_pred HHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecCC
Q 016786 123 TGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD 187 (382)
Q Consensus 123 ~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~~ 187 (382)
...+++|..|.-.+++-+.++=.+.|++..+++-.++-++++|+..++|-+..++|-+++...+.
T Consensus 329 vvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 329 VVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 55569999999999999999999999999999999999999999999999999999998866543
No 96
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=67.84 E-value=13 Score=35.95 Aligned_cols=22 Identities=14% Similarity=0.156 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhc
Q 016786 332 NGLKAIAMLLAIWGFLSYIYQH 353 (382)
Q Consensus 332 ~~~kiig~~L~l~G~~~y~y~~ 353 (382)
++...+|+++++.|...|..=+
T Consensus 115 ~~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 115 PWLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred hHHHHHHHHHHHHHHHheeeec
Confidence 4468899999998888885533
No 97
>COG0341 SecF Preprotein translocase subunit SecF [Intracellular trafficking and secretion]
Probab=67.18 E-value=1.1e+02 Score=30.53 Aligned_cols=136 Identities=10% Similarity=0.215 Sum_probs=69.1
Q ss_pred cCccChhHHHHHHHHHHHHHhhe-ecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehh
Q 016786 161 SQKFTPFIFNSLVLLTISATLLA-VNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDM 239 (382)
Q Consensus 161 kek~t~~~i~svvLl~~G~vll~-~~~~~~~p~~~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem 239 (382)
++.+.+.-+.|+.++++|+.+.. +. + +..+.+|.++++.-=+...+ +=...-+ +|+
T Consensus 129 g~eL~~~~~~Al~~alv~I~iYV~~R-F--------e~~~a~aaI~al~hDvii~~----g~~slfg----------iE~ 185 (305)
T COG0341 129 GKELARQGLLALLLALVGILIYVFFR-F--------EWRFALAAILALLHDVIITL----GFFSLFG----------IEF 185 (305)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhee-e--------ehHHHHHHHHHHHHHHHHHH----HHHHHhh----------eee
Confidence 56677778888888999887752 22 1 11344555555442222222 2111111 222
Q ss_pred HHHHHHHHHHHHHHHHHhcCC---ccccchhcccccccchhHHHHHHHHHHHHHHHHhhhhcceeeehhhhHHHHHHhhh
Q 016786 240 QIYSSFVATCGCVVGLFASGE---WKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEVSSLFSNVISTLSL 316 (382)
Q Consensus 240 ~~~~~l~a~~~~~igl~~~g~---~~~i~~e~~~f~~g~~~y~l~lv~~av~wq~~~vgvvGl~~~~ssl~a~vv~~~~l 316 (382)
.. ..+|.++.++|.-++.+ +..+.+..+.+++.+.. -.+=.++ +-.++..+.+...
T Consensus 186 ~l--~~IAAlLtiIGYSvNDtIVvfDRIREn~r~~~~~~~~---~iin~si----------------~qTlsRti~Ts~t 244 (305)
T COG0341 186 NL--ATIAALLTIIGYSVNDTIVVFDRIRENLRKYRRETLR---EIINTSI----------------NQTLTRTINTSVT 244 (305)
T ss_pred cH--HHHHHHHHHeeeccCCeEEEEhHHHHHHhhhccCCHH---HHHHHHH----------------HHHHHHHHHHHHH
Confidence 22 56888888899877654 33444444444443321 1111112 1222444555555
Q ss_pred HHHHHHHHHHhcC----cchHHHHHHHH
Q 016786 317 PVIPILAVIFFHD----KMNGLKAIAML 340 (382)
Q Consensus 317 pl~~ilavi~fgE----~~~~~kiig~~ 340 (382)
-+.++++.++||. .++...++|++
T Consensus 245 tll~~~~l~~fgg~~l~~fa~~llvGii 272 (305)
T COG0341 245 TLLVVVALLLFGGGSLKDFALALLVGII 272 (305)
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 5666888888884 33444444443
No 98
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=66.15 E-value=0.99 Score=44.11 Aligned_cols=47 Identities=19% Similarity=0.294 Sum_probs=37.9
Q ss_pred HHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhhccchh
Q 016786 311 ISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQHYLDD 357 (382)
Q Consensus 311 v~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~~~~~~ 357 (382)
+.+..+.++.++|+++++|+++.....|..+.+.|+...+.-.++-.
T Consensus 129 ItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG 175 (346)
T KOG4510|consen 129 ITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFG 175 (346)
T ss_pred EEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccC
Confidence 34444447799999999999999999999999999988766655443
No 99
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.24 E-value=1.2e+02 Score=27.20 Aligned_cols=122 Identities=22% Similarity=0.241 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccceEEehhHHHHHHHHHHHHH-HHHHhcCCccccchhcccccccchhH
Q 016786 200 VIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCV-VGLFASGEWKGLSKEMNGYGEGRVSY 278 (382)
Q Consensus 200 ~iG~~l~l~Aa~~~al~~~l~q~~~~kv~~~~~~~~vlem~~~~~l~a~~~~~-igl~~~g~~~~i~~e~~~f~~g~~~y 278 (382)
.+..++.+.|-++-..+..+.-+.-|.. - .++--.....++++..++ +.++.++. +... ... +
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~-----~-spl~As~isf~vGt~~L~~l~l~~~~~-~~~a-----~~~-~--- 67 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYL-----G-SPLLASLISFLVGTVLLLILLLIKQGH-PGLA-----AVA-S--- 67 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHc-----C-ChHHHHHHHHHHHHHHHHHHHHHhcCC-Cchh-----hcc-C---
Confidence 3445555556555555555554444432 1 233333444557766666 44443332 1111 111 1
Q ss_pred HHHHHHHHHHHHHHHhhhhcceeeehhhh----HHHHHHhhhHHH--HHHHHHHh-----c---CcchHHHHHHHHHHHH
Q 016786 279 LMTLIWTAVTWQISSVGLLGLVFEVSSLF----SNVISTLSLPVI--PILAVIFF-----H---DKMNGLKAIAMLLAIW 344 (382)
Q Consensus 279 ~l~lv~~av~wq~~~vgvvGl~~~~ssl~----a~vv~~~~lpl~--~ilavi~f-----g---E~~~~~kiig~~L~l~ 344 (382)
..|-.+.-|+.|..+.+++.. -+...+...++. .+.+.+.- | .+++..+.+|.++++.
T Consensus 68 --------~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~ 139 (150)
T COG3238 68 --------APWWAWIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLA 139 (150)
T ss_pred --------CchHHHHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHH
Confidence 122233345666666544444 222233333333 55555532 2 7899999999999998
Q ss_pred H
Q 016786 345 G 345 (382)
Q Consensus 345 G 345 (382)
|
T Consensus 140 g 140 (150)
T COG3238 140 G 140 (150)
T ss_pred H
Confidence 8
No 100
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=59.79 E-value=1.1e+02 Score=31.09 Aligned_cols=76 Identities=20% Similarity=0.255 Sum_probs=54.5
Q ss_pred hhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhhccchhhhhhhcccCcccccccCCccccccC
Q 016786 304 SSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQHYLDDYKSKTMENKSKANEVSGSGSVIEMC 382 (382)
Q Consensus 304 ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (382)
++.+-.+..-+++.-+.++.+++++++++..|+.++++...|.+.-=++. .+.. ..+.+..+.+..-|-..++.+|
T Consensus 117 daatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~-~~~~--~a~~~~~~~n~~~G~~avl~~c 192 (345)
T KOG2234|consen 117 DAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS-LSPT--GAKSESSAQNPFLGLVAVLVAC 192 (345)
T ss_pred CchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC-CCCC--CccCCCcccchhhhHHHHHHHH
Confidence 45556666777777889999999999999999999999998887754221 1111 1111556667777777777776
No 101
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=59.70 E-value=39 Score=33.73 Aligned_cols=107 Identities=12% Similarity=0.169 Sum_probs=75.1
Q ss_pred chhhHHHHHHhhHHHHHHHHhhhccCCCCC---C----CCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHH
Q 016786 72 SKWMATFVQSAGFPILLPILCCFSNGSRSA---N----TTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLL 144 (382)
Q Consensus 72 ~~w~~t~vq~agfplll~~~~~~~~~~~~~---~----~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll 144 (382)
++=++++-+..|.=+....+-..+--.+.+ . ...|-..+.+.++..+|. ..|++.| +-++.--+-|++.+
T Consensus 197 ~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~ga--vGQ~FI~-~TI~~FGslt~t~I 273 (327)
T KOG1581|consen 197 KYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGA--VGQLFIF-YTIERFGSLTFTTI 273 (327)
T ss_pred cCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhh--hhhheeh-hhHhhcccHHHHHH
Confidence 455677777777665554443332111111 1 233444455666777777 6776777 66666666788999
Q ss_pred HhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHh
Q 016786 145 CATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATL 181 (382)
Q Consensus 145 ~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vl 181 (382)
..+.=+|+.++|.+..+++++..||.++.+.+.|..+
T Consensus 274 ~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 274 MTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 9999999999999999999999999999999888775
No 102
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=58.25 E-value=21 Score=30.12 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=31.7
Q ss_pred hhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHH
Q 016786 306 LFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWG 345 (382)
Q Consensus 306 l~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G 345 (382)
-++.+-..+.+.+...+++++++|++++..+.|.++++.+
T Consensus 63 QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~a 102 (108)
T PF04342_consen 63 QLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGA 102 (108)
T ss_pred HHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHh
Confidence 3355555566667788999999999999999999998744
No 103
>PF10710 DUF2512: Protein of unknown function (DUF2512); InterPro: IPR019649 Proteins in this entry are predicted to be integral membrane proteins, and many of them are annotated as being YndM protein. They are all found in Firmicutes. The true function is not known.
Probab=57.55 E-value=36 Score=29.84 Aligned_cols=58 Identities=14% Similarity=0.115 Sum_probs=37.8
Q ss_pred ehhhhHHHHHHhhhH-HHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhhccchhhhh
Q 016786 303 VSSLFSNVISTLSLP-VIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQHYLDDYKS 360 (382)
Q Consensus 303 ~ssl~a~vv~~~~lp-l~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~~~~~~~~~ 360 (382)
.++..+++.....-- +.++....+.++..+.....-+.-++.|++=|+++.|.+++..
T Consensus 56 ~gN~~AtiaD~~La~~~iW~~~~~~~~~~~~~~~~allsA~~i~v~E~fFH~yl~~~~~ 114 (136)
T PF10710_consen 56 TGNIVATIADFGLAFLVIWLMGYILTGNYVSIAWAALLSAVLIGVGEYFFHRYLLRNVL 114 (136)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 355667777666554 5588888888755554333223335677899999988877643
No 104
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=56.97 E-value=26 Score=30.12 Aligned_cols=49 Identities=20% Similarity=0.274 Sum_probs=29.6
Q ss_pred hhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhh
Q 016786 304 SSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQ 352 (382)
Q Consensus 304 ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~ 352 (382)
+++++.....-.+|+..++...+++..+......+.+..+.|++.++.-
T Consensus 65 ~~~~~aa~l~Y~lPll~li~g~~l~~~~~~~e~~~~l~~l~~l~~~~~~ 113 (135)
T PF04246_consen 65 SSLLKAAFLVYLLPLLALIAGAVLGSYLGGSELWAILGGLLGLALGFLI 113 (135)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555566777666666666666665666666666666666443
No 105
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.32 E-value=46 Score=27.83 Aligned_cols=46 Identities=11% Similarity=0.195 Sum_probs=34.8
Q ss_pred eehhhhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Q 016786 302 EVSSLFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFL 347 (382)
Q Consensus 302 ~~ssl~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~ 347 (382)
++-.-++..-..+.+.+...++++.++|++.+..+.|..+++.|..
T Consensus 66 ~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~ 111 (116)
T COG3169 66 YSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVY 111 (116)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHH
Confidence 3333445555666667778899999999999999999998875443
No 106
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=51.16 E-value=44 Score=29.07 Aligned_cols=56 Identities=14% Similarity=0.226 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCchhhHHHHHHhhHHHHHHHHhhh
Q 016786 39 KWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCF 94 (382)
Q Consensus 39 ~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~agfplll~~~~~~ 94 (382)
|.-+.+.++.+.+++.++++.++.+..-..=.|.+|+.+-+-+.|+.....+..++
T Consensus 53 ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlTt~gyvpIffaV~ly 108 (130)
T PF08627_consen 53 KENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLTTFGYVPIFFAVVLY 108 (130)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhcccceehHHHHHHHH
Confidence 44688999999999999999999999988888899999999999987776665443
No 107
>PRK13024 bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Probab=49.24 E-value=2.8e+02 Score=31.12 Aligned_cols=17 Identities=18% Similarity=0.368 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHhcCC
Q 016786 244 SFVATCGCVVGLFASGE 260 (382)
Q Consensus 244 ~l~a~~~~~igl~~~g~ 260 (382)
..+|.++..+|.-++..
T Consensus 631 ~~iaall~iiGysvndt 647 (755)
T PRK13024 631 TFIAAILTIIGYSINDT 647 (755)
T ss_pred HHHHHHHHHHhheeece
Confidence 45777777788766653
No 108
>KOG4783 consensus Uncharacterized conserved protein [Function unknown]
Probab=48.80 E-value=56 Score=27.11 Aligned_cols=31 Identities=16% Similarity=0.100 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhccch-hhhhhhc
Q 016786 333 GLKAIAMLLAIWGFLSYIYQHYLD-DYKSKTM 363 (382)
Q Consensus 333 ~~kiig~~L~l~G~~~y~y~~~~~-~~~~~~~ 363 (382)
.-.+++.+.+=.-++.|+|..+.. ++++|+.
T Consensus 68 ySaI~aVVavHvalglyiy~A~~~~sr~~ke~ 99 (102)
T KOG4783|consen 68 YSAICAVVAVHVALGLYIYRAIYAKSRTAKEA 99 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 345556666556678888876544 4444433
No 109
>PRK15086 ethanolamine utilization protein EutH; Provisional
Probab=47.69 E-value=3.3e+02 Score=27.96 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=25.5
Q ss_pred hccCchhHHHHHHhhhHHH---HHHHHHHHhcCccChhHHHHHHHH
Q 016786 133 LLYLPVSTYSLLCATQLAF---NAFFSFFLNSQKFTPFIFNSLVLL 175 (382)
Q Consensus 133 l~ylp~St~sll~ssql~F---taifs~lilkek~t~~~i~svvLl 175 (382)
.+.+|.-.++++.+..+.| .++-.+.++++-......+++++.
T Consensus 171 ~NL~Piii~~illa~GL~~~p~~mIkgF~~FGk~i~~~~~igL~~~ 216 (372)
T PRK15086 171 RNLIPVIIFAILLALGLKFIPEKMIKGFLIFGKFIVALITIGLAAA 216 (372)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3557887777777776555 455555555555554444444433
No 110
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=46.17 E-value=10 Score=35.77 Aligned_cols=44 Identities=32% Similarity=0.499 Sum_probs=36.8
Q ss_pred HHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHh
Q 016786 308 SNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIY 351 (382)
Q Consensus 308 a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y 351 (382)
++-++.+--..+-+++++++||++.+.|+++.++++.|.....|
T Consensus 82 asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 82 ASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred hHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 44456666678899999999999999999999999988876554
No 111
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.06 E-value=2.2e+02 Score=25.47 Aligned_cols=108 Identities=16% Similarity=0.162 Sum_probs=65.2
Q ss_pred CCCchhhHHHHHH-hhHHHHHHHHhhhccCCCCCC--CCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHH
Q 016786 69 GGNSKWMATFVQS-AGFPILLPILCCFSNGSRSAN--TTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLC 145 (382)
Q Consensus 69 gg~~~w~~t~vq~-agfplll~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ 145 (382)
..++|..++++.+ .|.-.++....+ ..+++... .+.|+| ..+.-.+|..+-..|.+- .=+.=.+-|-.++.
T Consensus 30 ~~~spl~As~isf~vGt~~L~~l~l~-~~~~~~~a~~~~~pwW---~~~GG~lGa~~vt~s~~l--~p~lGa~~t~~l~i 103 (150)
T COG3238 30 YLGSPLLASLISFLVGTVLLLILLLI-KQGHPGLAAVASAPWW---AWIGGLLGAIFVTSSILL--APRLGAATTIALVI 103 (150)
T ss_pred HcCChHHHHHHHHHHHHHHHHHHHHH-hcCCCchhhccCCchH---HHHccchhhhhhhhhHHh--ccchhHHHHHHHHH
Confidence 3458888887765 456666554444 32221111 233433 222333444444443222 11223455677888
Q ss_pred hhhHHHHHHHHHHHh----cCccChhHHHHHHHHHHHHHhh
Q 016786 146 ATQLAFNAFFSFFLN----SQKFTPFIFNSLVLLTISATLL 182 (382)
Q Consensus 146 ssql~Ftaifs~lil----kek~t~~~i~svvLl~~G~vll 182 (382)
+.|++..++.-.+=. ++++++.++.+++++.+|+.++
T Consensus 104 ~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 104 AGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 999999999887755 5999999999999999995554
No 112
>PRK01844 hypothetical protein; Provisional
Probab=44.00 E-value=33 Score=26.88 Aligned_cols=28 Identities=29% Similarity=0.604 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHhc
Q 016786 41 WLRVILYVVCLLVGQSAATLLGRLYYDK 68 (382)
Q Consensus 41 ~~~~~~~~~~~~~g~~~~~Ll~r~y~~~ 68 (382)
|+.+.+-++++++|..++..+.|.|+.+
T Consensus 4 ~~~I~l~I~~li~G~~~Gff~ark~~~k 31 (72)
T PRK01844 4 WLGILVGVVALVAGVALGFFIARKYMMN 31 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666777889999999999999999875
No 113
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=43.22 E-value=2.7e+02 Score=25.67 Aligned_cols=16 Identities=25% Similarity=0.229 Sum_probs=9.5
Q ss_pred HHHHHHHHHhcCccCh
Q 016786 151 FNAFFSFFLNSQKFTP 166 (382)
Q Consensus 151 Ftaifs~lilkek~t~ 166 (382)
-.++..++.+|+|++.
T Consensus 188 ~i~~~~~~~lkkk~~i 203 (206)
T PF06570_consen 188 VIAFALRFYLKKKYNI 203 (206)
T ss_pred HHHHHHHHHHHHHhCC
Confidence 4455556666777653
No 114
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=42.21 E-value=26 Score=26.32 Aligned_cols=42 Identities=19% Similarity=0.225 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHH-Hhh-------ccchhhhhhhcccCcccccccC
Q 016786 333 GLKAIAMLLAIWGFLSY-IYQ-------HYLDDYKSKTMENKSKANEVSG 374 (382)
Q Consensus 333 ~~kiig~~L~l~G~~~y-~y~-------~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
..-++|..+.+.|.+.| ++- +|++.++-.++.-+-+|+++.|
T Consensus 7 ~~~~~ggfVg~iG~a~Ypi~~~Pmm~~eeYk~~Q~~nR~gI~qedvQP~g 56 (58)
T PF15061_consen 7 YALFVGGFVGLIGAALYPIYFRPMMNPEEYKKEQKINRAGIKQEDVQPGG 56 (58)
T ss_pred chhhHHHHHHHHHHHHhhhhcccccChHHHHHHHHHHHhcccHhhcCCCC
Confidence 34578899999999999 432 3444444444555566666654
No 115
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=42.03 E-value=2e+02 Score=28.59 Aligned_cols=48 Identities=21% Similarity=0.286 Sum_probs=41.4
Q ss_pred CchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhhe
Q 016786 136 LPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLA 183 (382)
Q Consensus 136 lp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~ 183 (382)
.++=|.+++....=+++.++|.+.++..+|+++|+|..+.++|..+-+
T Consensus 266 ~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 266 TSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred ecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 444556667777889999999999999999999999999999988854
No 116
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=39.84 E-value=5.4e+02 Score=28.16 Aligned_cols=21 Identities=14% Similarity=0.077 Sum_probs=14.1
Q ss_pred CccChhHHHHHHHHHHHHHhh
Q 016786 162 QKFTPFIFNSLVLLTISATLL 182 (382)
Q Consensus 162 ek~t~~~i~svvLl~~G~vll 182 (382)
+++.+.-+.+.++.+++...+
T Consensus 377 r~~Kw~li~~~~~~ta~~Gam 397 (599)
T PF06609_consen 377 RHIKWQLIFGSVLMTAFCGAM 397 (599)
T ss_pred cchhHHHHHHHHHHHHHHHHH
Confidence 466566568888888765554
No 117
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=38.90 E-value=1.3e+02 Score=29.07 Aligned_cols=130 Identities=18% Similarity=0.128 Sum_probs=79.7
Q ss_pred hhhHHHHHHHHHhcCCCchhhHHH-HHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 016786 55 QSAATLLGRLYYDKGGNSKWMATF-VQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGL 133 (382)
Q Consensus 55 ~~~~~Ll~r~y~~~gg~~~w~~t~-vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl 133 (382)
.++=+|.+|.--+-.+.+++=.-+ -.....|+++..-+++.-+.+.+-. ..+...-+.+-+..|+...+..++-.+-+
T Consensus 167 saafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~a-nnl~~d~l~am~ISgl~svgiSy~saWcv 245 (309)
T COG5070 167 SAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLA-NNLSVDSLMAMFISGLCSVGISYCSAWCV 245 (309)
T ss_pred HHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhh-cCCChHHHHHHHHHHHHHhhhhhccceeE
Confidence 344456666654444333322111 1234567776555554322211101 01111112333445776666667777788
Q ss_pred ccCchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheec
Q 016786 134 LYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN 185 (382)
Q Consensus 134 ~ylp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~ 185 (382)
+-++..|++++-+.+=.-.++-+.+++.+..++..+.++.+-+++.++-+++
T Consensus 246 rVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYava 297 (309)
T COG5070 246 RVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA 297 (309)
T ss_pred eehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999988888888899999999999999888888777765544
No 118
>KOG4026 consensus Uncharacterized conserved protein [Function unknown]
Probab=37.68 E-value=1.9e+02 Score=27.22 Aligned_cols=51 Identities=16% Similarity=0.257 Sum_probs=31.2
Q ss_pred EehhHHHHHHHHHHHHHHHHHhcCC-cc--ccc---hh-cccccccc----hhHHHHHHHHH
Q 016786 236 VLDMQIYSSFVATCGCVVGLFASGE-WK--GLS---KE-MNGYGEGR----VSYLMTLIWTA 286 (382)
Q Consensus 236 vlem~~~~~l~a~~~~~igl~~~g~-~~--~i~---~e-~~~f~~g~----~~y~l~lv~~a 286 (382)
+.+|..|+..+|.+.+.+|.++.-+ |. +++ ++ ++.|+.|. |.|+++++...
T Consensus 109 i~~~cg~~q~~a~l~milGc~lyP~GW~s~~vr~~CG~~a~ky~lG~CsIgWaY~lAIig~~ 170 (207)
T KOG4026|consen 109 IFNMCGWMQGIAGLCMILGCALYPDGWDSPEVRRMCGAKAGKYYLGDCSIGWAYYLAIIGIL 170 (207)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcCCccCCHHHHHHhccccCCccCccccccHHHHHHHHHHH
Confidence 6778889999999888899777442 22 111 11 22465553 66766555444
No 119
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=37.35 E-value=3.2e+02 Score=24.87 Aligned_cols=116 Identities=9% Similarity=0.088 Sum_probs=55.0
Q ss_pred cchhHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCchhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHH
Q 016786 37 HYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYV 116 (382)
Q Consensus 37 ~~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (382)
++..+....+...+.++|...+.++ +.+..+..+++|....+-...--+++. .++.....+. + .+ ...-.
T Consensus 45 ~~~~~~~~~~~i~~F~~G~~~~~~i-~~~~~~~~~~~~~~~~l~~~~~ll~~~-~~~~~~~~~~-----~--~~-~~~~~ 114 (209)
T PF06912_consen 45 DWSGALRYLLAILSFILGAFLAGLI-VRRSRRRRRRRWYRILLLLEAILLLIA-ALLPPAFPPH-----G--HR-ILAIF 114 (209)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH-HHhccccchhHHHHHHHHHHHHHHHHH-HHHHHhcccc-----h--HH-HHHHH
Confidence 3434555566666666676666666 223333434444443333322222222 2222211100 0 11 22223
Q ss_pred HHHHHHHHHHHHHHhhhccCchhHHHHHHhhhHHHHHHHHHHHhcCc
Q 016786 117 AFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQK 163 (382)
Q Consensus 117 ~~Gll~~~~n~Ly~~gl~ylp~St~sll~ssql~Ftaifs~lilkek 163 (382)
...+.++.||-.+ ..+.-.+..|.-+.....=....+..++.-|+|
T Consensus 115 ~lafamg~Qn~~~-~~~~g~~~~Tt~~TG~l~~~~~~l~~~~~~~~~ 160 (209)
T PF06912_consen 115 LLAFAMGMQNAAF-RRLGGVSIRTTFMTGNLTDLGIDLARYLRGKDR 160 (209)
T ss_pred HHHHHHHHHHHHH-HHcCCCcccchhhHhhHHHHHHHHHHHHhCCch
Confidence 4467788898777 444445554444444444444555556666655
No 120
>PRK11056 hypothetical protein; Provisional
Probab=37.25 E-value=71 Score=27.46 Aligned_cols=62 Identities=26% Similarity=0.354 Sum_probs=37.2
Q ss_pred hhhcceeeehhhhHHHHHHhhhH-HHHHHHHHHhc-----Cc-chHHHHHHHHHHHHHHHHH---Hhhccchh
Q 016786 295 GLLGLVFEVSSLFSNVISTLSLP-VIPILAVIFFH-----DK-MNGLKAIAMLLAIWGFLSY---IYQHYLDD 357 (382)
Q Consensus 295 gvvGl~~~~ssl~a~vv~~~~lp-l~~ilavi~fg-----E~-~~~~kiig~~L~l~G~~~y---~y~~~~~~ 357 (382)
|+-+-+.+ ++++++.|-...-| ++.++++.-+| ++ ....-.++.+.-+.|...| +..+|+|.
T Consensus 19 Gl~~ng~f-s~Lf~s~VpFSiFPlIaLvLavycLyQ~Yl~~~m~eg~P~~a~acFflG~f~ySA~vraeyPei 90 (120)
T PRK11056 19 GLSINGTF-AALFSSIVPFSIFPLIALVLAVYCLHQRYLNRPMPEGLPGLAAACFFLGVFLYSAFVRAEYPEI 90 (120)
T ss_pred HHhhchhh-HHHHccccccHHHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 33333444 67888888444445 77899999776 22 2334556666666666665 33456553
No 121
>PRK12405 electron transport complex RsxE subunit; Provisional
Probab=36.71 E-value=3.9e+02 Score=25.62 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=18.9
Q ss_pred ehhHHHHHHHHHHHHHHHHHhcCCcc
Q 016786 237 LDMQIYSSFVATCGCVVGLFASGEWK 262 (382)
Q Consensus 237 lem~~~~~l~a~~~~~igl~~~g~~~ 262 (382)
+++.+|+..+|+.+..+-++.....+
T Consensus 67 lRi~v~IlvIA~~V~~v~~~L~a~~p 92 (231)
T PRK12405 67 IRIPIFVMIIASFVTVVQLLMNAYAY 92 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66778888888888888777665433
No 122
>PRK00523 hypothetical protein; Provisional
Probab=36.34 E-value=52 Score=25.84 Aligned_cols=28 Identities=21% Similarity=0.260 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHhc
Q 016786 41 WLRVILYVVCLLVGQSAATLLGRLYYDK 68 (382)
Q Consensus 41 ~~~~~~~~~~~~~g~~~~~Ll~r~y~~~ 68 (382)
|+.+.+-++++++|..++..+.|.|+.+
T Consensus 5 ~l~I~l~i~~li~G~~~Gffiark~~~k 32 (72)
T PRK00523 5 GLALGLGIPLLIVGGIIGYFVSKKMFKK 32 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666777888999999999999999885
No 123
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=33.78 E-value=53 Score=27.75 Aligned_cols=29 Identities=14% Similarity=0.080 Sum_probs=23.8
Q ss_pred HHHHHHHhcCccChhHHHHHHHHHHHHHh
Q 016786 153 AFFSFFLNSQKFTPFIFNSLVLLTISATL 181 (382)
Q Consensus 153 aifs~lilkek~t~~~i~svvLl~~G~vl 181 (382)
+.||.+.+||++++.++.|-+.+..++..
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 56888999999999999998888666443
No 124
>PF07695 7TMR-DISM_7TM: 7TM diverse intracellular signalling; InterPro: IPR011623 This entry represents the transmembrane region of the 7TM-DISM (7TM Receptors with Diverse Intracellular Signalling Modules) [].
Probab=33.17 E-value=3.3e+02 Score=23.77 Aligned_cols=20 Identities=5% Similarity=0.153 Sum_probs=12.3
Q ss_pred hhHHHHHHhhHHHHHHHHhh
Q 016786 74 WMATFVQSAGFPILLPILCC 93 (382)
Q Consensus 74 w~~t~vq~agfplll~~~~~ 93 (382)
+.+........++..+.+..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~ 82 (205)
T PF07695_consen 63 WWSQHLEYLFLMLSFIFFLL 82 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 66666666666666644443
No 125
>PRK13023 bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Probab=33.07 E-value=5.9e+02 Score=28.73 Aligned_cols=28 Identities=14% Similarity=0.254 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHhcCC---ccccchhcccc
Q 016786 244 SFVATCGCVVGLFASGE---WKGLSKEMNGY 271 (382)
Q Consensus 244 ~l~a~~~~~igl~~~g~---~~~i~~e~~~f 271 (382)
..+|.++..+|.-++.. +..++++.+..
T Consensus 632 ~~IAAlLTiiGYSiNDTIVVfDRIREn~~~~ 662 (758)
T PRK13023 632 WSVAAILTIIGYSLNDTVVIYDRVRENLRRY 662 (758)
T ss_pred HHHHHHHHHHhhcccCeEEEeHHHHHHHhhc
Confidence 55778888888877653 33454444443
No 126
>PF07226 DUF1422: Protein of unknown function (DUF1422); InterPro: IPR009867 This family consists of several hypothetical bacterial proteins of around 120 residues in length. The function of this family is unknown.
Probab=33.07 E-value=98 Score=26.51 Aligned_cols=54 Identities=30% Similarity=0.444 Sum_probs=33.5
Q ss_pred hhhcceeeehhhhHHHHHHhhhH-HHHHHHHHHhc-----Ccc-hHHHHHHHHHHHHHHHHH
Q 016786 295 GLLGLVFEVSSLFSNVISTLSLP-VIPILAVIFFH-----DKM-NGLKAIAMLLAIWGFLSY 349 (382)
Q Consensus 295 gvvGl~~~~ssl~a~vv~~~~lp-l~~ilavi~fg-----E~~-~~~kiig~~L~l~G~~~y 349 (382)
|+-|-+.+ ++++.+.|....-| ++.++++.-+| +++ ...-.++...-+.|...|
T Consensus 19 Gl~~n~~~-s~L~~s~VpFSiFPlIaLvLavy~LyQ~Yl~~~m~eg~P~~a~acFflG~f~y 79 (117)
T PF07226_consen 19 GLCGNATF-SALFSSEVPFSIFPLIALVLAVYCLYQRYLNHPMPEGTPKLALACFFLGLFGY 79 (117)
T ss_pred HHhccchh-HHHHhcccccHHHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHH
Confidence 44444444 67888888554445 77888888775 222 334566666667666665
No 127
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=32.69 E-value=6.3e+02 Score=26.88 Aligned_cols=85 Identities=18% Similarity=0.123 Sum_probs=48.0
Q ss_pred ccCchhHHHHHHhhhHHHHHHHHHHH--hcCccChhHHHHHHHHHHHHHhheecCCCCCCCCCCCchhHHHHHHHHHHHH
Q 016786 134 LYLPVSTYSLLCATQLAFNAFFSFFL--NSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASA 211 (382)
Q Consensus 134 ~ylp~St~sll~ssql~Ftaifs~li--lkek~t~~~i~svvLl~~G~vll~~~~~~~~p~~~~~~~~~iG~~l~l~Aa~ 211 (382)
...++..+.++.++.-+=..+-+.+. +++|+++.++..+.....|..++.+.-.. ...+.....+.+.+
T Consensus 249 l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~---------~~~~~~~~l~l~G~ 319 (524)
T PF05977_consen 249 LGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP---------SFWLALIALFLAGA 319 (524)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch---------HHHHHHHHHHHHHH
Confidence 34788899998877655444444433 46788887777766666666554333211 12333333344445
Q ss_pred HHHHHHHHHHHHHHHh
Q 016786 212 TYSLYLSLLQLSFEKV 227 (382)
Q Consensus 212 ~~al~~~l~q~~~~kv 227 (382)
.+.......+-..++.
T Consensus 320 ~~~~~~~~~~t~~Q~~ 335 (524)
T PF05977_consen 320 AWIIANSSLNTLVQLS 335 (524)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 5555555555555554
No 128
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=32.25 E-value=4e+02 Score=26.63 Aligned_cols=51 Identities=20% Similarity=0.175 Sum_probs=43.1
Q ss_pred CchhHHHHHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecC
Q 016786 136 LPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA 186 (382)
Q Consensus 136 lp~St~sll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~ 186 (382)
--+.+...+....=+.|.++|++++.+.+|-...-|..+...|+.+=-.+.
T Consensus 284 fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 284 FGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred hchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 455667777888889999999999999999999999999999988843443
No 129
>PRK02237 hypothetical protein; Provisional
Probab=31.21 E-value=1e+02 Score=26.10 Aligned_cols=38 Identities=3% Similarity=0.115 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecC
Q 016786 149 LAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA 186 (382)
Q Consensus 149 l~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~ 186 (382)
.+.+.+..+++-++|.+++.+.+..+.++|+.++-+.+
T Consensus 70 I~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 70 VAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 34445667788899999999999999999999886653
No 130
>PRK09804 putative cryptic C4-dicarboxylate transporter DcuD; Provisional
Probab=31.16 E-value=6.6e+02 Score=26.61 Aligned_cols=69 Identities=13% Similarity=0.226 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhcCccChhHHHH--HHHHHHHHHhheecCCCC--CCCCC-----------CCchhHHHHHHHHHHHHHH
Q 016786 149 LAFNAFFSFFLNSQKFTPFIFNS--LVLLTISATLLAVNADSE--NTSGV-----------SKGNYVIGFLCTLGASATY 213 (382)
Q Consensus 149 l~Ftaifs~lilkek~t~~~i~s--vvLl~~G~vll~~~~~~~--~p~~~-----------~~~~~~iG~~l~l~Aa~~~ 213 (382)
++.+.+-.|++.|+-=++..+.. ++++.++.. .+.++..+ ++.+. .-.+..-|..+++++...|
T Consensus 8 l~vi~~v~y~iiKky~~~~vL~~~Gl~ll~~a~~-~g~~~~~~~~~stG~~~~D~f~~i~~~~~s~~~glGl~Im~~~GF 86 (455)
T PRK09804 8 VIVLITMGYLILKNYKPQVVLAAAGIFLMMCGVW-LGFGGVLDPAKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGY 86 (455)
T ss_pred HHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH-cCCCCCCCccCCcCchHhhHHHHHHHHHhhccccHHHHHHHHHhH
Confidence 45566677777776655554443 333344433 23222111 11110 0012346888899999999
Q ss_pred HHHHH
Q 016786 214 SLYLS 218 (382)
Q Consensus 214 al~~~ 218 (382)
+.|.-
T Consensus 87 a~YM~ 91 (455)
T PRK09804 87 ARYME 91 (455)
T ss_pred HHHHH
Confidence 98754
No 131
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.08 E-value=12 Score=37.52 Aligned_cols=39 Identities=28% Similarity=0.461 Sum_probs=32.6
Q ss_pred HHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHH
Q 016786 312 STLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYI 350 (382)
Q Consensus 312 ~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~ 350 (382)
.++.++.+.++|.++++|+++..-.+|.++++.|....+
T Consensus 97 GAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV 135 (335)
T KOG2922|consen 97 GALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV 135 (335)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence 455567779999999999999999999999997665553
No 132
>PF11293 DUF3094: Protein of unknown function (DUF3094); InterPro: IPR021444 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=30.50 E-value=80 Score=23.43 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=23.6
Q ss_pred hhcccchhHHHHHHHHHHHHhhhhhHHHHHHH
Q 016786 33 LKLKHYKWWLRVILYVVCLLVGQSAATLLGRL 64 (382)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~g~~~~~Ll~r~ 64 (382)
-++|+.|-|.++++-...++.-+-.+.++.|+
T Consensus 23 VER~PFrP~~Ll~~li~Vv~gl~llS~ll~~l 54 (55)
T PF11293_consen 23 VERKPFRPWRLLIVLIVVVIGLGLLSRLLSRL 54 (55)
T ss_pred cccCCcchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35688888888877777776666777777764
No 133
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=29.67 E-value=2.5e+02 Score=29.66 Aligned_cols=44 Identities=7% Similarity=-0.150 Sum_probs=29.9
Q ss_pred hhHHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhhccc
Q 016786 306 LFSNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQHYL 355 (382)
Q Consensus 306 l~a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~~~~ 355 (382)
+.+-++-.+|.+-.. ++. .++..|++++++++.|+..+++.++.
T Consensus 235 i~RF~iEflR~d~~~----~~~--gl~~~Q~lSl~~il~gl~~~~~~~~~ 278 (460)
T PRK13108 235 AGRFCVELLRDDPAT----LIA--GIRINSFTSTFVFIGAVVYIILAPKG 278 (460)
T ss_pred HHHHHhhhhccCchh----hhc--CccHHHHHHHHHHHHHHHHHHHhhcc
Confidence 346666677764211 111 37899999999999999888776543
No 134
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=29.03 E-value=3.6e+02 Score=25.31 Aligned_cols=48 Identities=13% Similarity=0.320 Sum_probs=26.9
Q ss_pred HHhcCCCchhhHHHHHH---hhHHHHHHHHhhhccCCCCCCCCCChhhHHHHH
Q 016786 65 YYDKGGNSKWMATFVQS---AGFPILLPILCCFSNGSRSANTTDPKISTLVCL 114 (382)
Q Consensus 65 y~~~gg~~~w~~t~vq~---agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~ 114 (382)
||+++-+-.=+.|++-+ +||...+--+|+.+.+. .++.+|.+.|.++.
T Consensus 117 ff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~a--d~sqr~~~~K~~lv 167 (226)
T COG4858 117 FFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRA--DNSQRPGTWKYLLV 167 (226)
T ss_pred HHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhc--ccccCCchHHHHHH
Confidence 66665555556666654 57887765555543222 23555665554444
No 135
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=27.89 E-value=2.4e+02 Score=29.27 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=25.3
Q ss_pred HHHHHHHhcCccChhHHHHHHHHHHHHHhheec
Q 016786 153 AFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN 185 (382)
Q Consensus 153 aifs~lilkek~t~~~i~svvLl~~G~vll~~~ 185 (382)
.+.-+++-|=++..+.+..+++..+|..++++.
T Consensus 77 l~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~ 109 (402)
T PF02487_consen 77 LIAPFFIHRVPYWIRILICVALSAAGMLLVAFS 109 (402)
T ss_pred HHhHhhhhhccchHHHHHHHHHHHHHHhheeec
Confidence 445566666777888888888999998888765
No 136
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=27.87 E-value=76 Score=26.97 Aligned_cols=55 Identities=20% Similarity=0.231 Sum_probs=40.1
Q ss_pred HHHHhhhccCchhHHH-HHHhhhHHHHHHHHHHHhcCccChhHHHHHHHHHHHHHh
Q 016786 127 MMYSYGLLYLPVSTYS-LLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATL 181 (382)
Q Consensus 127 ~Ly~~gl~ylp~St~s-ll~ssql~Ftaifs~lilkek~t~~~i~svvLl~~G~vl 181 (382)
.+|..-++..|.|.+. +.+++..+||+++.+.+--|-..++.+.+..+..+|+.+
T Consensus 67 aly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 67 ALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 6666777777766544 445678899999999876666667777788777777654
No 137
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=27.53 E-value=70 Score=24.79 Aligned_cols=19 Identities=37% Similarity=0.658 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHH-Hhhc
Q 016786 335 KAIAMLLAIWGFLSY-IYQH 353 (382)
Q Consensus 335 kiig~~L~l~G~~~y-~y~~ 353 (382)
-+++...++.|+..| +|++
T Consensus 6 iLi~ICVaii~lIlY~iYnr 25 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNR 25 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 456777778777777 5543
No 138
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=27.28 E-value=67 Score=27.36 Aligned_cols=40 Identities=10% Similarity=0.163 Sum_probs=29.1
Q ss_pred HHHHHHhhhHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Q 016786 308 SNVISTLSLPVIPILAVIFFHDKMNGLKAIAMLLAIWGFL 347 (382)
Q Consensus 308 a~vv~~~~lpl~~ilavi~fgE~~~~~kiig~~L~l~G~~ 347 (382)
.-++.++....+.+.+.++.+|..+....+|+++++.|+.
T Consensus 71 vPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~ 110 (113)
T PF10639_consen 71 VPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVA 110 (113)
T ss_pred ehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCee
Confidence 3344455555667777777777778888999999998864
No 139
>COG4711 Predicted membrane protein [Function unknown]
Probab=26.88 E-value=1.6e+02 Score=27.77 Aligned_cols=71 Identities=15% Similarity=0.116 Sum_probs=42.0
Q ss_pred HHHhcCccChhHHHHHHHHHHHHHhhee---cCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016786 157 FFLNSQKFTPFIFNSLVLLTISATLLAV---NADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKV 227 (382)
Q Consensus 157 ~lilkek~t~~~i~svvLl~~G~vll~~---~~~~~~p~~~~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~kv 227 (382)
...+..|.++++.+++++.+++..-..+ +.++++..+...+--..=+.-++..+....+...++=..|.+.
T Consensus 114 vwllA~~isp~h~lal~~~~l~I~y~fvy~a~f~~~~~~~~~~g~vp~rl~~tmv~y~~~~l~~~y~l~~f~~~ 187 (217)
T COG4711 114 VWLLAYRISPYHSLALVLVVLVIMYSFVYTAKFGNDKKREEGAGFVPRRLRTTMVIYFVSSLASIYMLGIFTRF 187 (217)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccceeeeehHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 5678899999999999999888664422 2111111111111112334455666666666666666777776
No 140
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=26.63 E-value=95 Score=24.13 Aligned_cols=21 Identities=14% Similarity=0.498 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHhhccchhhh
Q 016786 339 MLLAIWGFLSYIYQHYLDDYK 359 (382)
Q Consensus 339 ~~L~l~G~~~y~y~~~~~~~~ 359 (382)
+++.+.++.+.+|-+-+++|+
T Consensus 42 i~~~~lt~ltN~YFK~k~drr 62 (68)
T PF04971_consen 42 IFFGLLTYLTNLYFKIKEDRR 62 (68)
T ss_pred HHHHHHHHHhHhhhhhhHhhh
Confidence 344455555555544444443
No 141
>PF02447 GntP_permease: GntP family permease; InterPro: IPR003474 This is a family of integral membrane permeases that are involved in gluconate uptake. Escherichia coli contains several members of this family including GntU, a low affinity transporter [] and GntT, a high affinity transporter [].; GO: 0015128 gluconate transmembrane transporter activity, 0035429 gluconate transmembrane transport, 0016020 membrane
Probab=26.57 E-value=7.5e+02 Score=25.95 Aligned_cols=47 Identities=17% Similarity=0.232 Sum_probs=34.2
Q ss_pred HHhhhH-HHHHHHHHHhcCcchHHHHHHHHHHHHHHHH--HHhhccchhh
Q 016786 312 STLSLP-VIPILAVIFFHDKMNGLKAIAMLLAIWGFLS--YIYQHYLDDY 358 (382)
Q Consensus 312 ~~~~lp-l~~ilavi~fgE~~~~~kiig~~L~l~G~~~--y~y~~~~~~~ 358 (382)
..+.+| -.++.+.=.+|-++....+.|+++.+-.... ++|.++.+++
T Consensus 151 h~lvPPtPgpla~a~~lg~dlG~~il~Gl~vaip~~~iag~~~~~~~~~~ 200 (441)
T PF02447_consen 151 HALVPPTPGPLAAAGALGADLGLVILYGLIVAIPAMLIAGPLYGRFISKR 200 (441)
T ss_pred hhccCCCCcHHHHHHHhCCChhHHHHHhHHHHHHHHHHHHHHHHHHhccC
Confidence 445555 5577777888999999999998888876644 5776665555
No 142
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=25.63 E-value=1e+03 Score=27.10 Aligned_cols=30 Identities=7% Similarity=-0.150 Sum_probs=14.4
Q ss_pred HhcCcchHH-HHHHHHHHHHHHHHHHhhccc
Q 016786 326 FFHDKMNGL-KAIAMLLAIWGFLSYIYQHYL 355 (382)
Q Consensus 326 ~fgE~~~~~-kiig~~L~l~G~~~y~y~~~~ 355 (382)
+.++..++. +++-.-.-.-|+++.+|.-|-
T Consensus 351 li~~~~s~rErlFigWFGpRGIGSIyyl~~A 381 (810)
T TIGR00844 351 LIPDIKSWREAMFIGHFGPIGVGAVFAAILS 381 (810)
T ss_pred hcccCCCHHHHHHheeeccccHHHHHHHHHH
Confidence 455555443 333333344455555554443
No 143
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=25.18 E-value=1.4e+02 Score=25.31 Aligned_cols=37 Identities=0% Similarity=0.170 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhcCccChhHHHHHHHHHHHHHhheecC
Q 016786 150 AFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA 186 (382)
Q Consensus 150 ~Ftaifs~lilkek~t~~~i~svvLl~~G~vll~~~~ 186 (382)
+.+.+..+.+-++|.+++.+.+..+.++|+.++-+.+
T Consensus 69 ~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 69 VASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 3445567778899999999999999999999986663
No 144
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=25.02 E-value=3e+02 Score=24.06 Aligned_cols=74 Identities=16% Similarity=0.192 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHHhcC-ccChhHHHHHHHHHHHHHhheecC-----CCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 016786 148 QLAFNAFFSFFLNSQ-KFTPFIFNSLVLLTISATLLAVNA-----DSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQ 221 (382)
Q Consensus 148 ql~Ftaifs~lilke-k~t~~~i~svvLl~~G~vll~~~~-----~~~~p~~~~~~~~~iG~~l~l~Aa~~~al~~~l~q 221 (382)
...++....+++.|+ |-.++..+... +++++.++.+. -..+| ..+....-+++-.+.+++.|--|+...+
T Consensus 66 ~~~~~l~~~~lffkr~~~~P~~~I~~l--l~~v~~~~l~~~~~~~~~~~~--~~d~~~i~~l~~~li~a~IwipYf~~S~ 141 (149)
T PF10754_consen 66 MWLFTLWLLYLFFKRKRRFPKLYIIWL--LISVLFIALDAFAFSYIFPSP--VIDAEAIRELLRSLIAAAIWIPYFLRSK 141 (149)
T ss_pred HHHHHHHHHHHHHHccchhHHHHHHHH--HHHHHHHHHHHHHHHHhcccc--cccHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 345666666666555 45555555332 22333121111 01012 1233456688889999999999998885
Q ss_pred HHHH
Q 016786 222 LSFE 225 (382)
Q Consensus 222 ~~~~ 225 (382)
++-+
T Consensus 142 RVK~ 145 (149)
T PF10754_consen 142 RVKN 145 (149)
T ss_pred Hhhh
Confidence 5543
No 145
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=24.14 E-value=6.6e+02 Score=24.32 Aligned_cols=143 Identities=11% Similarity=0.125 Sum_probs=85.1
Q ss_pred hhhHHHHHHhhHHHHHHHHhhhccCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHhh-hHHH
Q 016786 73 KWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCAT-QLAF 151 (382)
Q Consensus 73 ~w~~t~vq~agfplll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~Ly~~gl~ylp~St~sll~ss-ql~F 151 (382)
..+-.|+|.+|--+.-....+... .| +..-+..+.|.+.+..|.+--..++.+-.+...++-++ +.+.
T Consensus 27 g~~fQw~~~~~i~~~g~~v~~~~~--------~p---~f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~ 95 (254)
T PF07857_consen 27 GFFFQWVMCSGIFLVGLVVNLILG--------FP---PFYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLT 95 (254)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcC--------CC---cceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHH
Confidence 466677888876665433332210 11 12223566788888888666677777777777777666 5554
Q ss_pred HHHHHHH----HhcCc--cChhHHHHHHHHHHHHHhhee-cCCC-------C------C-----CC------CC------
Q 016786 152 NAFFSFF----LNSQK--FTPFIFNSLVLLTISATLLAV-NADS-------E------N-----TS------GV------ 194 (382)
Q Consensus 152 taifs~l----ilkek--~t~~~i~svvLl~~G~vll~~-~~~~-------~------~-----p~------~~------ 194 (382)
.=.-+.+ +.+|. -.+..++++++..+|.++... ++.. + + ++ +.
T Consensus 96 Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~l 175 (254)
T PF07857_consen 96 GWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSIEDVIEIEDDSENSEDSSWVDEL 175 (254)
T ss_pred HHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCCcccccccccccccccccccccccccccccccccc
Confidence 4444433 22232 345677888888888887643 1110 0 0 00 00
Q ss_pred -CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016786 195 -SKGNYVIGFLCTLGASATYSLYLSLLQLSFEK 226 (382)
Q Consensus 195 -~~~~~~iG~~l~l~Aa~~~al~~~l~q~~~~k 226 (382)
+.+++.+|..+++.+.++||....=.+...++
T Consensus 176 ~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 176 SPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred ccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 11257899999999999999976655555554
No 146
>PRK10489 enterobactin exporter EntS; Provisional
Probab=23.18 E-value=7.3e+02 Score=24.47 Aligned_cols=20 Identities=25% Similarity=0.212 Sum_probs=10.1
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 016786 332 NGLKAIAMLLAIWGFLSYIY 351 (382)
Q Consensus 332 ~~~kiig~~L~l~G~~~y~y 351 (382)
...-+.|.+..+.+...+.+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 379 ASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 33445555555555555443
No 147
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=22.99 E-value=88 Score=24.98 Aligned_cols=21 Identities=24% Similarity=0.426 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcc
Q 016786 334 LKAIAMLLAIWGFLSYIYQHY 354 (382)
Q Consensus 334 ~kiig~~L~l~G~~~y~y~~~ 354 (382)
.=++|+++.++|...++++..
T Consensus 5 ~Fl~~l~lliig~~~~v~~~G 25 (92)
T PF13038_consen 5 LFLVGLILLIIGGFLFVFQSG 25 (92)
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 347888889999988888654
No 148
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=22.96 E-value=7.8e+02 Score=24.73 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhh
Q 016786 317 PVIPILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQ 352 (382)
Q Consensus 317 pl~~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~ 352 (382)
.++.+.-+++||-+++..-..++.+.++|...+...
T Consensus 115 i~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~ 150 (314)
T KOG1444|consen 115 ILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFT 150 (314)
T ss_pred HHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccc
Confidence 466888999999888887788888888777666443
No 149
>PF14184 YrvL: Regulatory protein YrvL
Probab=22.69 E-value=3.7e+02 Score=23.39 Aligned_cols=26 Identities=15% Similarity=0.275 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016786 200 VIGFLCTLGASATYSLYLSLLQLSFE 225 (382)
Q Consensus 200 ~iG~~l~l~Aa~~~al~~~l~q~~~~ 225 (382)
..+..+++...+.+|.|...+--.++
T Consensus 5 ~~~i~~~l~~~~v~a~~ff~~~gif~ 30 (132)
T PF14184_consen 5 IIFIIIALLLIIVFAIYFFVMVGIFH 30 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777777888887666655555
No 150
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.55 E-value=1.9e+02 Score=24.27 Aligned_cols=30 Identities=13% Similarity=0.137 Sum_probs=24.9
Q ss_pred HHHHHHHhcCccChhHHHHHHHHHHHHHhh
Q 016786 153 AFFSFFLNSQKFTPFIFNSLVLLTISATLL 182 (382)
Q Consensus 153 aifs~lilkek~t~~~i~svvLl~~G~vll 182 (382)
..||.+.+||.+++.++.+-.+...|+..+
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 468999999999999999988777776654
No 151
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=20.77 E-value=2.6e+02 Score=25.01 Aligned_cols=9 Identities=22% Similarity=0.681 Sum_probs=4.3
Q ss_pred HHHHhcCcc
Q 016786 323 AVIFFHDKM 331 (382)
Q Consensus 323 avi~fgE~~ 331 (382)
..++++|.+
T Consensus 97 ~~L~~~e~~ 105 (150)
T COG3086 97 QYLFFSELI 105 (150)
T ss_pred HHHhhhhHH
Confidence 344455554
No 152
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=20.18 E-value=6.9e+02 Score=23.02 Aligned_cols=34 Identities=12% Similarity=0.233 Sum_probs=24.5
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhhc
Q 016786 320 PILAVIFFHDKMNGLKAIAMLLAIWGFLSYIYQH 353 (382)
Q Consensus 320 ~ilavi~fgE~~~~~kiig~~L~l~G~~~y~y~~ 353 (382)
-.++..+|.|-.=+..++|.+|.+.=++.....+
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~ 166 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLAR 166 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4567888888888889988888765555554543
Done!