Query 016787
Match_columns 382
No_of_seqs 125 out of 1303
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 03:46:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016787.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016787hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iok_A Chaperonin 60; chaperon 100.0 1.6E-87 5.5E-92 693.1 26.2 379 2-381 167-545 (545)
2 1kp8_A Groel protein; chaperon 100.0 3E-86 1E-90 683.4 33.5 378 2-380 166-546 (547)
3 3rtk_A 60 kDa chaperonin 2; he 100.0 1.9E-85 6.6E-90 676.1 29.6 376 2-382 165-540 (546)
4 1we3_A CPN60(groel); chaperoni 100.0 3.3E-84 1.1E-88 668.7 38.3 377 2-382 165-543 (543)
5 3aq1_B Thermosome subunit; gro 100.0 7.2E-71 2.5E-75 565.5 30.1 312 10-382 151-496 (500)
6 3ruv_A Chaperonin, CPN; double 100.0 1E-69 3.6E-74 561.7 29.6 321 2-381 179-543 (543)
7 1q3q_A Thermosome alpha subuni 100.0 6.9E-68 2.4E-72 548.6 29.9 314 9-382 199-546 (548)
8 1a6d_A Thermosome (alpha subun 100.0 9.4E-68 3.2E-72 547.2 27.4 315 8-382 195-545 (545)
9 3p9d_C T-complex protein 1 sub 100.0 2.3E-67 8E-72 546.5 22.1 325 10-363 206-589 (590)
10 3ko1_A Chaperonin; 9-fold symm 100.0 7.5E-65 2.6E-69 525.7 27.9 307 2-367 190-540 (553)
11 1a6d_B Thermosome (beta subuni 100.0 1E-64 3.4E-69 524.7 27.8 299 10-367 198-530 (543)
12 3iyg_B T-complex protein 1 sub 100.0 1.8E-63 6E-68 512.2 33.2 301 2-362 175-513 (513)
13 3iyg_H T-complex protein 1 sub 100.0 2E-63 6.7E-68 511.8 32.0 303 2-360 175-514 (515)
14 3iyg_A T-complex protein 1 sub 100.0 2.8E-63 9.6E-68 512.4 30.2 298 10-361 191-529 (529)
15 3iyg_G T-complex protein 1 sub 100.0 7.1E-63 2.4E-67 507.9 32.4 292 10-360 189-514 (515)
16 3p9d_G T-complex protein 1 sub 100.0 9.5E-65 3.2E-69 525.0 18.5 303 8-367 200-534 (550)
17 3p9d_A T-complex protein 1 sub 100.0 1.4E-63 4.9E-68 517.0 23.8 302 11-366 206-554 (559)
18 3iyg_E T-complex protein 1 sub 100.0 3.6E-62 1.2E-66 502.9 32.8 289 12-359 191-514 (515)
19 3iyg_D T-complex protein 1 sub 100.0 1.2E-61 4.2E-66 499.0 31.2 300 2-360 171-518 (518)
20 3p9d_E T-complex protein 1 sub 100.0 3.4E-62 1.2E-66 507.0 25.6 301 10-363 226-561 (562)
21 3p9d_D T-complex protein 1 sub 100.0 4.5E-63 1.6E-67 510.5 18.4 304 2-360 179-528 (528)
22 3iyg_Z T-complex protein 1 sub 100.0 4.9E-61 1.7E-65 494.2 30.8 287 13-359 188-516 (517)
23 3iyg_Q T-complex protein 1 sub 100.0 9.1E-61 3.1E-65 492.2 30.6 299 2-360 172-512 (512)
24 3p9d_B T-complex protein 1 sub 100.0 5.6E-63 1.9E-67 510.2 13.4 305 2-366 182-524 (527)
25 3p9d_H T-complex protein 1 sub 100.0 1.7E-62 5.8E-67 509.9 13.3 301 9-368 206-556 (568)
26 3p9d_F T-complex protein 1 sub 100.0 6E-61 2.1E-65 496.7 17.1 293 11-362 197-539 (546)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 8.8E-46 3E-50 326.3 14.6 193 22-214 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 2.5E-44 8.4E-49 317.8 16.6 188 25-212 12-199 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 7.1E-35 2.4E-39 245.7 13.5 144 27-170 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 4.5E-25 1.5E-29 196.7 13.8 145 19-222 2-174 (178)
31 1ass_A Thermosome; chaperonin, 99.9 3.1E-21 1E-25 168.7 12.8 126 25-173 1-153 (159)
32 3ruv_A Chaperonin, CPN; double 76.9 0.5 1.7E-05 48.4 0.0 28 323-350 474-505 (543)
33 1sgw_A Putative ABC transporte 35.5 32 0.0011 30.1 4.1 42 49-90 148-194 (214)
34 1g6h_A High-affinity branched- 33.8 23 0.00079 31.9 2.9 42 50-91 169-215 (257)
35 2q8p_A Iron-regulated surface 32.0 42 0.0014 29.6 4.3 58 72-134 53-110 (260)
36 1ji0_A ABC transporter; ATP bi 31.6 34 0.0012 30.4 3.6 40 50-89 155-199 (240)
37 1b0u_A Histidine permease; ABC 30.3 33 0.0011 31.0 3.4 40 50-89 169-213 (262)
38 1pq4_A Periplasmic binding pro 29.9 89 0.003 28.6 6.3 36 64-99 222-257 (291)
39 1s3l_A Hypothetical protein MJ 29.7 1.5E+02 0.0051 25.0 7.4 64 45-112 17-82 (190)
40 2pcj_A ABC transporter, lipopr 27.3 32 0.0011 30.2 2.7 41 50-90 156-201 (224)
41 1vpl_A ABC transporter, ATP-bi 26.6 35 0.0012 30.8 2.8 40 50-89 162-206 (256)
42 2ln3_A De novo designed protei 26.1 1.7E+02 0.0059 20.5 7.0 52 64-138 11-62 (83)
43 2olj_A Amino acid ABC transpor 26.1 39 0.0013 30.6 3.0 40 50-89 175-219 (263)
44 3md9_A Hemin-binding periplasm 25.8 1.3E+02 0.0045 26.2 6.6 58 72-134 52-111 (255)
45 3tif_A Uncharacterized ABC tra 25.3 34 0.0012 30.3 2.4 41 50-90 161-207 (235)
46 2yz2_A Putative ABC transporte 25.0 44 0.0015 30.1 3.2 42 50-91 154-200 (266)
47 2nq2_C Hypothetical ABC transp 24.3 41 0.0014 30.2 2.8 42 49-90 143-190 (253)
48 3gfo_A Cobalt import ATP-bindi 24.3 47 0.0016 30.3 3.2 42 50-91 159-206 (275)
49 2r7a_A Bacterial heme binding 24.2 1.4E+02 0.0047 26.0 6.4 57 72-133 52-111 (256)
50 2ihy_A ABC transporter, ATP-bi 23.1 48 0.0016 30.3 3.0 41 50-90 177-224 (279)
51 2d2e_A SUFC protein; ABC-ATPas 21.9 31 0.0011 30.8 1.4 39 51-89 160-203 (250)
52 1n2z_A Vitamin B12 transport p 21.8 66 0.0023 28.1 3.6 37 72-112 50-87 (245)
53 3v7e_A Ribosome-associated pro 21.2 1.3E+02 0.0045 21.8 4.6 54 71-134 19-72 (82)
54 3dmp_A Uracil phosphoribosyltr 20.8 1.6E+02 0.0056 25.8 5.9 66 46-112 124-192 (217)
55 4hn9_A Iron complex transport 20.8 1.2E+02 0.004 28.0 5.3 57 72-134 109-165 (335)
No 1
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.6e-87 Score=693.14 Aligned_cols=379 Identities=61% Similarity=0.944 Sum_probs=310.1
Q ss_pred cccCCCceEEEEeCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccCCCCHHHHHHHHHHHHHcCCC
Q 016787 2 EKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRP 81 (382)
Q Consensus 2 ~~~G~~g~i~~~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I~~~~~l~~~le~i~~~~~~ 81 (382)
++||++|+|.+++|++++|++++++|++|+++|.||||++++++|+++++||+||++|++|+++++++++++++.++|+|
T Consensus 167 ~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~ 246 (545)
T 1iok_A 167 QRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKP 246 (545)
T ss_dssp HHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-----------CCC
T ss_pred HHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCC
Confidence 56899999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccccCCcCCCceeeEEEEe
Q 016787 82 LLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTIS 161 (382)
Q Consensus 82 lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i~ 161 (382)
|||++++|+++|+++|+.|++++.++|+|||+|+|+++++++|+|||++|||++++++.+++++++++++||+|++|+++
T Consensus 247 lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~ 326 (545)
T 1iok_A 247 LLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSIN 326 (545)
T ss_dssp CEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEEC
T ss_pred EEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCchhHHHHHHHHHHHHHHHHHHH
Q 016787 162 KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAA 241 (382)
Q Consensus 162 ~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a 241 (382)
+++|+||++|+++++++.|+++++.+++.+.|+|+|++|+||+++|+|++|||+|||+|+.+++|++|+++|||+++|++
T Consensus 327 ~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a 406 (545)
T 1iok_A 327 KDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAA 406 (545)
T ss_dssp SSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccccchHHHHHHHHHHHHhccCChhhHHHHHHHHHHhhhhHHHHHHHcCCCHHHHHHHHHhcCCCceeEeCCCCcc
Q 016787 242 VEEGIVPGGGVALLYAAKELEKLSTANFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQDNTDLGYDAAKGEY 321 (382)
Q Consensus 242 ~~~gvvpGGGa~e~~ls~~L~~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~vi~~l~~~~~~~~Gid~~~~~i 321 (382)
+++|+|||||++|++++..|++++..++++|+++++|++||+.||++||+|||+|+.+++++|++.|++++|||+.+|++
T Consensus 407 v~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~ 486 (545)
T 1iok_A 407 VQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEY 486 (545)
T ss_dssp HHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEE
T ss_pred hhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcc
Confidence 99999999999999999999988655789999999999999999999999999999999999998888899999999999
Q ss_pred ccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCccCCCCCCCCCCCCCCCCCC
Q 016787 322 VDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAPGGMGGMGGMGGMD 381 (382)
Q Consensus 322 ~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~~~~~~~~~ 381 (382)
.||++.|||||+.||+++|++|+|+|++|||||++|...|++++++ |+||||||||||+
T Consensus 487 ~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~~~-~~~~~~~~~~~~~ 545 (545)
T 1iok_A 487 GDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPKAPA-GGMPDMGGMGGMM 545 (545)
T ss_dssp EEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC--------------------
T ss_pred cchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccCCCC-CCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999988766443 6789999999983
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=3e-86 Score=683.36 Aligned_cols=378 Identities=55% Similarity=0.883 Sum_probs=351.2
Q ss_pred cccCCCceEEEEeCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccCCCCHHHHHHHHHHHHHcCCC
Q 016787 2 EKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRP 81 (382)
Q Consensus 2 ~~~G~~g~i~~~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I~~~~~l~~~le~i~~~~~~ 81 (382)
++||++|+|.+++|++++|++++++|++|+++|.||||++++++|+++++||+||++|++|+++++++++++++.++|+|
T Consensus 166 ~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~ 245 (547)
T 1kp8_A 166 DKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKP 245 (547)
T ss_dssp HHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCC
T ss_pred HHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCC
Confidence 57899999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccccCCcCCCceeeEEEEe
Q 016787 82 LLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTIS 161 (382)
Q Consensus 82 lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i~ 161 (382)
|||++++|+++|+++|+.|++++.++|+|||+|+|+++++++|+|||++|||++++++.+++++++++++||+|++|+++
T Consensus 246 lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~ 325 (547)
T 1kp8_A 246 LLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVIN 325 (547)
T ss_dssp EEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEEC
T ss_pred EEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCchhHHHHHHHHHHHHHHHHHHH
Q 016787 162 KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAA 241 (382)
Q Consensus 162 ~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a 241 (382)
+++|+||++|+++++++.|+++++.+++.+.|+|+|++|+||+++|+|++|||+|||+|+.+++|++|+++|||+++|++
T Consensus 326 ~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~a 405 (547)
T 1kp8_A 326 KDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAA 405 (547)
T ss_dssp SSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccccchHHHHHHHHHHHHhccCChhhHHHHHHHHHHhhhhHHHHHHHcCCCHHHHHHHHHhcCCCceeEeCCCCcc
Q 016787 242 VEEGIVPGGGVALLYAAKELEKLSTANFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQDNTDLGYDAAKGEY 321 (382)
Q Consensus 242 ~~~gvvpGGGa~e~~ls~~L~~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~vi~~l~~~~~~~~Gid~~~~~i 321 (382)
+++|+|||||++|++++..|++++..++++|+++++|++||+.||++||+|||+|+.+++++|++. +.++|||+.+|++
T Consensus 406 v~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~ 484 (547)
T 1kp8_A 406 VEEGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEY 484 (547)
T ss_dssp HHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEE
T ss_pred ccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCcc
Confidence 999999999999999999999886557899999999999999999999999999999999999976 5789999999999
Q ss_pred ccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCccCCCC-CC--CCCCCCCCCCC
Q 016787 322 VDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEA-PG--GMGGMGGMGGM 380 (382)
Q Consensus 322 ~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~-~~--~~~~~~~~~~~ 380 (382)
.||++.|||||+.||+++|++|+|+|++|||||++|..+|++++++ |+ +||||||||||
T Consensus 485 ~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (547)
T 1kp8_A 485 GNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGM 546 (547)
T ss_dssp EETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC---------------------
T ss_pred ccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccCCCCCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999988776432 22 45566777776
No 3
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.9e-85 Score=676.08 Aligned_cols=376 Identities=51% Similarity=0.822 Sum_probs=341.4
Q ss_pred cccCCCceEEEEeCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccCCCCHHHHHHHHHHHHHcCCC
Q 016787 2 EKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRP 81 (382)
Q Consensus 2 ~~~G~~g~i~~~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I~~~~~l~~~le~i~~~~~~ 81 (382)
++||++|+|.++.+.+..+++++++|++|+++|.||||++++++|+++++||+||++|++|+++++++++++++.++|+|
T Consensus 165 ~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~ 244 (546)
T 3rtk_A 165 DKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKP 244 (546)
T ss_dssp HHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCC
T ss_pred HHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCC
Confidence 57899999999998887777899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccccCCcCCCceeeEEEEe
Q 016787 82 LLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTIS 161 (382)
Q Consensus 82 lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i~ 161 (382)
|||++++|+++|+++|+.|+++|+++|++||+|+|++.++++|+|||++|||++++++.+++++++++++||+|++|+++
T Consensus 245 lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~ 324 (546)
T 3rtk_A 245 LLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVT 324 (546)
T ss_dssp EEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEEC
T ss_pred EEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999888888999999999999999999
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCchhHHHHHHHHHHHHHHHHHHH
Q 016787 162 KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAA 241 (382)
Q Consensus 162 ~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a 241 (382)
+++++||++|+++++++.|+++|+.+++.+.|+|++++|++|+++|+|++|||+|||+|+.+++|++|+++||||++|++
T Consensus 325 ~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~a 404 (546)
T 3rtk_A 325 KDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAA 404 (546)
T ss_dssp SSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccccchHHHHHHHHHHHHhccCChhhHHHHHHHHHHhhhhHHHHHHHcCCCHHHHHHHHHhcCCCceeEeCCCCcc
Q 016787 242 VEEGIVPGGGVALLYAAKELEKLSTANFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQDNTDLGYDAAKGEY 321 (382)
Q Consensus 242 ~~~gvvpGGGa~e~~ls~~L~~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~vi~~l~~~~~~~~Gid~~~~~i 321 (382)
+++|+|||||++|++++..|++++ .++++|+++++|++||+.||++||+|||+|+.+++++|++. ...+|||+.+|++
T Consensus 405 v~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~ 482 (546)
T 3rtk_A 405 VEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVY 482 (546)
T ss_dssp HHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCC
T ss_pred HhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcE
Confidence 999999999999999999999887 67899999999999999999999999999999999999986 4569999999999
Q ss_pred ccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCccCCCCCCCCCCCCCCCCCCC
Q 016787 322 VDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAPGGMGGMGGMGGMDY 382 (382)
Q Consensus 322 ~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (382)
.||++.|||||+.||.++|++|+|+|++|||||++|..+|+++|++ |+|+|+||||||
T Consensus 483 ~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~~---~~~~~~~~~~~~ 540 (546)
T 3rtk_A 483 EDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEKAS---VPGGGDMGGMDF 540 (546)
T ss_dssp EETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC----------------------------
T ss_pred eeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC---CCCCCCcCcccc
Confidence 9999999999999999999999999999999999999998887654 335566778886
No 4
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=3.3e-84 Score=668.73 Aligned_cols=377 Identities=52% Similarity=0.864 Sum_probs=353.6
Q ss_pred cccCCCceEEEEeCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccCCCCHHHHHHHHHHHHHcCCC
Q 016787 2 EKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRP 81 (382)
Q Consensus 2 ~~~G~~g~i~~~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I~~~~~l~~~le~i~~~~~~ 81 (382)
.+||++|+|.+++|++++|++++++|++|+++|.+|||++++++|+++++||+||++|++|+++++++++++++.++|+|
T Consensus 165 ~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~ 244 (543)
T 1we3_A 165 EKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKP 244 (543)
T ss_dssp HTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCC
T ss_pred HHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCC
Confidence 57899999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccccCCcCCCceeeEEEEe
Q 016787 82 LLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTIS 161 (382)
Q Consensus 82 lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i~ 161 (382)
|||++++|+++|+++|+.|++++.++|+|||+|+|+++++++|+|||++|||++++++.+++++++++++||+|+.|+++
T Consensus 245 lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~ 324 (543)
T 1we3_A 245 LLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRIT 324 (543)
T ss_dssp EEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEEC
T ss_pred EEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCchhHHHHHHHHHHHHHHHHHHH
Q 016787 162 KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAA 241 (382)
Q Consensus 162 ~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a 241 (382)
+++++||++|+++++++.|+++++.+++.+.|+|++++|++|+++|+|++|||+|||+|+.+++|++|+++|||+++|++
T Consensus 325 ~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~a 404 (543)
T 1we3_A 325 KDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAA 404 (543)
T ss_dssp SSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHHcCCCHHHHHHHHHhcC-CCceeEeCCCC
Q 016787 242 VEEGIVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQD-NTDLGYDAAKG 319 (382)
Q Consensus 242 ~~~gvvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~vi~~l~~~~-~~~~Gid~~~~ 319 (382)
+++|+|||||++|++++..|++++.+ ++++|+++++|++||+.||++||+|||+|+.+++++|++.| +.++|||+.+|
T Consensus 405 v~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g 484 (543)
T 1we3_A 405 VEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATG 484 (543)
T ss_dssp HHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTT
T ss_pred hccCcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCC
Confidence 99999999999999999999999876 78999999999999999999999999999999999999976 56899999999
Q ss_pred ccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCccCCCCCCCCCCCCCCCCCCC
Q 016787 320 EYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAPGGMGGMGGMGGMDY 382 (382)
Q Consensus 320 ~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (382)
++.||++.|||||+.||+++|++|+|+|++|||||++|..+|++.|++|. +| ||+||||
T Consensus 485 ~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~---~~-~~~~~~~ 543 (543)
T 1we3_A 485 EFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKESTPA---SA-GAGDMDF 543 (543)
T ss_dssp EEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC-------------------
T ss_pred eecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCC---CC-CCCCCCC
Confidence 99999999999999999999999999999999999999998887665433 22 3778876
No 5
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=7.2e-71 Score=565.51 Aligned_cols=312 Identities=21% Similarity=0.364 Sum_probs=262.4
Q ss_pred EEEE--eCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC-------------CCCHHHH------
Q 016787 10 ITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV------ 68 (382)
Q Consensus 10 i~~~--~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------I~~~~~l------ 68 (382)
|.++ +|++++|+ ++++|++|+++|.||+ |+++++||+||+++++ |++++++
T Consensus 151 I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~ 222 (500)
T 3aq1_B 151 IKIEKRAGGSIDDS-ELIDGLVIDKERSHPN-------MPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQ 222 (500)
T ss_dssp EEEEEEESSCGGGC-EEESEEEESCCCSSTT-------SCSEEEEEEEEEESSCBCC-----------------------
T ss_pred EEEEEecCCCccce-EEEeeeEEeecCCCCC-------CcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHH
Confidence 4554 99999865 9999999999999997 5778999999999999 6677775
Q ss_pred -----HHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCc
Q 016787 69 -----VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMD 143 (382)
Q Consensus 69 -----~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~ 143 (382)
.+++++|.++|+||||++++|++.|+++|.+|+ |+||+ ++++++|+|||++|||+++++
T Consensus 223 E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~----- 286 (500)
T 3aq1_B 223 EEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQD----- 286 (500)
T ss_dssp --CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSC-----
T ss_pred HHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEecc-----
Confidence 789999999999999999999999999999998 68887 667999999999999999998
Q ss_pred cccCCcCCCceeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCc
Q 016787 144 LEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGAS 220 (382)
Q Consensus 144 l~~l~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t 220 (382)
++++++++||+|++|++. +++|+||++|++ +++|||+|||+|
T Consensus 287 l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~t 331 (500)
T 3aq1_B 287 LDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQN-----------------------------------SKAVTVLLHGGT 331 (500)
T ss_dssp TTCCCSTTCEEEEEEEEEECSSSEEEEEEEETT-----------------------------------CCCEEEEEEESS
T ss_pred cccCCHhHCCCceEEEEEEecCeEEEEEECCCC-----------------------------------CceEEEEecCCc
Confidence 999999999999999986 789999999875 368999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHHcCCCHH
Q 016787 221 EAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGA 298 (382)
Q Consensus 221 ~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~ 298 (382)
+.+++|++|+++|||+++|+++++| +|||||++|++++..|++++.+ ++++|+++++|++||+.||++||+|||+|+.
T Consensus 332 ~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~ 411 (500)
T 3aq1_B 332 EHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPI 411 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 9999999999999999999999999 9999999999999999999876 7899999999999999999999999999999
Q ss_pred HHHHHHHhcC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCccCCCCCCCCCCCC
Q 016787 299 VVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAPGGMGGMG 375 (382)
Q Consensus 299 ~vi~~l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~~~ 375 (382)
+++++|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|+++|++ | |||||
T Consensus 412 ~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~-~-~g~~~ 489 (500)
T 3aq1_B 412 DIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSANQGM-G-PGGLP 489 (500)
T ss_dssp HHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC----------------------
T ss_pred HHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCC-C-CCCCC
Confidence 9999999876 25899999999999999999999999999999999999999999999999988877664 3 89999
Q ss_pred CCCCCCC
Q 016787 376 GMGGMDY 382 (382)
Q Consensus 376 ~~~~~~~ 382 (382)
||+||||
T Consensus 490 ~~~~~~~ 496 (500)
T 3aq1_B 490 DMPDLDM 496 (500)
T ss_dssp -------
T ss_pred CCCCCCc
Confidence 9999997
No 6
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1e-69 Score=561.65 Aligned_cols=321 Identities=22% Similarity=0.369 Sum_probs=276.7
Q ss_pred cccCCC-ce-----EEEE--eCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC------------
Q 016787 2 EKVGKE-GV-----ITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK------------ 61 (382)
Q Consensus 2 ~~~G~~-g~-----i~~~--~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~------------ 61 (382)
.+||++ |. |.++ +|+++.|+ ++++|++|+++|.||+ |+++++||+|+++|++
T Consensus 179 ~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~~n~kIll~~~~Le~~k~e~~~~v 250 (543)
T 3ruv_A 179 SAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQ-------MPKKVTDAKIALLNCAIEIKETETDAEI 250 (543)
T ss_dssp HHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTT-------SCSEEEEEEEEEESSCBSCCCCSSCCCE
T ss_pred HHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCcc-------ccccccCcEEEEEcccccccccccCcee
Confidence 356776 76 6554 88888775 9999999999999998 5788999999999995
Q ss_pred -CCCHHH-----------HHHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHH
Q 016787 62 -ISNLTA-----------VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAV 129 (382)
Q Consensus 62 -I~~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~ 129 (382)
|+++++ +.+++++|.+.|+||||++++|++.++++|.+++ |++|+ ++++++|+|||+
T Consensus 251 ~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~g------I~~v~-----~v~k~~le~ia~ 319 (543)
T 3ruv_A 251 RITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEG------IVAAR-----RVKKSDMEKLAK 319 (543)
T ss_dssp EECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcC------cEEEe-----eCCHHHHHHHHH
Confidence 566666 5677899999999999999999999999999877 67887 557999999999
Q ss_pred HHCCeEeccCCCCccccCCcCCCceeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhh
Q 016787 130 LTGGDLITEELGMDLEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAK 206 (382)
Q Consensus 130 ~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~ 206 (382)
+|||+++++ ++++++++||+|++|++. +++|+||.+|+++
T Consensus 320 ~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-------------------------------- 362 (543)
T 3ruv_A 320 ATGANVIAA-----IAALSAQDLGDAGLVEERKISGDSMIFVEECKHP-------------------------------- 362 (543)
T ss_dssp HHCCCEESC-----GGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC--------------------------------
T ss_pred HhCCceecc-----cccCCHHHCCcccEEEEEEeCCceEEEEECCCCC--------------------------------
Confidence 999999999 999999999999999986 7899999999864
Q ss_pred hcCCeEEEEecCCchhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhh
Q 016787 207 LSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKT 284 (382)
Q Consensus 207 l~g~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ 284 (382)
..+||+|||+|+.+++|++|+++||||++|+++++| +|||||++|++|+..|++++.+ ++++|+++++|++||+.
T Consensus 363 ---~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ 439 (543)
T 3ruv_A 363 ---KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEV 439 (543)
T ss_dssp ---SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTH
T ss_pred ---ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999 9999999999999999999876 88999999999999999
Q ss_pred hHHHHHHHcCCCHHHHHHHHHhcCC----CceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccC
Q 016787 285 PVHTIAANAGVEGAVVVGKLLEQDN----TDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVEL 360 (382)
Q Consensus 285 ip~~L~~NaG~d~~~vi~~l~~~~~----~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~ 360 (382)
||++||+|||+|+.+++.+|++.|. .++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..+
T Consensus 440 ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~ 519 (543)
T 3ruv_A 440 IPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAE 519 (543)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecC
Confidence 9999999999999999999998763 689999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCC---CCCCCCCCCCCCC
Q 016787 361 PKEEKEAP---GGMGGMGGMGGMD 381 (382)
Q Consensus 361 ~~~~~~~~---~~~~~~~~~~~~~ 381 (382)
|++.|+++ |+|||||||+|||
T Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~ 543 (543)
T 3ruv_A 520 KLRGAPDMGDMGGMPGMGGMPGMM 543 (543)
T ss_dssp ------------------------
T ss_pred ccCCCCCCCCCCCCCCCCCCCCCC
Confidence 88765542 3455566666554
No 7
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=6.9e-68 Score=548.58 Aligned_cols=314 Identities=22% Similarity=0.416 Sum_probs=277.3
Q ss_pred eEEEE--eCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC-------------CCCHHHH-----
Q 016787 9 VITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV----- 68 (382)
Q Consensus 9 ~i~~~--~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------I~~~~~l----- 68 (382)
+|.++ +|++++|+ ++++|++|+++|.||+| +++++||+||++|++ |++++++
T Consensus 199 ~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~ 270 (548)
T 1q3q_A 199 NIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRM-------PKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLE 270 (548)
T ss_dssp GEEEEEEEBSCGGGC-EEESSEEESCCCSSTTS-------CSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHH
T ss_pred eEEEEEecCCCccce-EEEeeEEEeccCCCCCC-------cceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHH
Confidence 78777 99999986 99999999999999984 677999999999999 7788886
Q ss_pred ------HHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCC
Q 016787 69 ------VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGM 142 (382)
Q Consensus 69 ------~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~ 142 (382)
.+++++|.++|+||||++++|++.|+++|..|+ |+||+ ++++++|+|||++|||+++++
T Consensus 271 ~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~ii~~---- 335 (548)
T 1q3q_A 271 QEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAVR-----RVKKSDMEKLAKATGAKIVTN---- 335 (548)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSS----
T ss_pred HHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEEc-----cCCHHHHHHHHHHhCCeEecc----
Confidence 788999999999999999999999999999998 68887 667999999999999999998
Q ss_pred ccccCCcCCCceeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCC
Q 016787 143 DLEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGA 219 (382)
Q Consensus 143 ~l~~l~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~ 219 (382)
++++++++||+|+.|++. +++|+||++|++ +.+|||+|||+
T Consensus 336 -l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~ 379 (548)
T 1q3q_A 336 -VKDLTPEDLGYAEVVEERKLAGENMIFVEGCKN-----------------------------------PKAVTILIRGG 379 (548)
T ss_dssp -GGGCCGGGCEEESEEEEEEETTEEEEEEECCSS-----------------------------------CSSEEEEEEES
T ss_pred -cccCCHHHCCCceEEEEEEecCceEEEEecCCC-----------------------------------CCeEEEEECCC
Confidence 999999999999999986 789999999875 36899999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHHcCCCH
Q 016787 220 SEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEG 297 (382)
Q Consensus 220 t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~ 297 (382)
|+.+++|++|+++|||+++|+++++| +|||||++|++++..|++++.+ ++++|+++++|++||+.||++||+|||+|+
T Consensus 380 te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~ 459 (548)
T 1q3q_A 380 TEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDT 459 (548)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999 9999999999999999999876 789999999999999999999999999999
Q ss_pred HHHHHHHHhcC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCccCCCCCCCCCCC
Q 016787 298 AVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAPGGMGGM 374 (382)
Q Consensus 298 ~~vi~~l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~~ 374 (382)
.+++++|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|++++.+++ +++|
T Consensus 460 ~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~-~~~~ 538 (548)
T 1q3q_A 460 VEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATKPEGGQG-GGMP 538 (548)
T ss_dssp HHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC-------------
T ss_pred HHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCCC-CCCC
Confidence 99999999876 3689999999999999999999999999999999999999999999999998876443212 1345
Q ss_pred CCCCCCCC
Q 016787 375 GGMGGMDY 382 (382)
Q Consensus 375 ~~~~~~~~ 382 (382)
|||||||+
T Consensus 539 ~~~~g~~~ 546 (548)
T 1q3q_A 539 GGMGGMDM 546 (548)
T ss_dssp --------
T ss_pred CCCCCCCC
Confidence 66667764
No 8
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=9.4e-68 Score=547.24 Aligned_cols=315 Identities=22% Similarity=0.377 Sum_probs=273.8
Q ss_pred ceEEEE--eCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC-------------CCCHHHH----
Q 016787 8 GVITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV---- 68 (382)
Q Consensus 8 g~i~~~--~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------I~~~~~l---- 68 (382)
++|.++ +|++++|+ ++++|++|+++|.||+| ++.++||+||++|++ |++++++
T Consensus 195 ~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~ 266 (545)
T 1a6d_A 195 ANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSKM-------PDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFL 266 (545)
T ss_dssp GGEEEEECCCSCSTTC-EEESEEEESCCCSCTTS-------CSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHH
T ss_pred ceEEEEEecCCCceee-EEEeeEEEeccCCCCCC-------cceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHH
Confidence 488887 99999986 99999999999999984 677999999999999 6777775
Q ss_pred -------HHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCC
Q 016787 69 -------VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELG 141 (382)
Q Consensus 69 -------~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~ 141 (382)
.+++++|.++|+||||++++|++.|+++|..|+ |+||+ ++++++|+|||++|||+++++
T Consensus 267 ~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~--- 332 (545)
T 1a6d_A 267 NQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVTD--- 332 (545)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEEC-----SCCHHHHHHHHHHHCCCEESS---
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCeeecc---
Confidence 788999999999999999999999999999998 68887 667999999999999999999
Q ss_pred CccccCCcCCCceeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecC
Q 016787 142 MDLEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGG 218 (382)
Q Consensus 142 ~~l~~l~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG 218 (382)
++++++++||+|+.|++. +++|+||++|++ +++|||+|||
T Consensus 333 --l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG 375 (545)
T 1a6d_A 333 --LDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN-----------------------------------PKAVSILIRG 375 (545)
T ss_dssp --GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESC-----------------------------------SSCEEEEECC
T ss_pred --cccCCHHHCCCceEEEEEEecCceEEEEecCCC-----------------------------------CceEEEEEcC
Confidence 999999999999999986 689999999875 3689999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHHcCCC
Q 016787 219 ASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVE 296 (382)
Q Consensus 219 ~t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d 296 (382)
+|+.+++|++|+++|||+++|+++++| +|||||++|++|+..|++++.+ ++++|+++++|++||+.||++||+|||+|
T Consensus 376 ~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d 455 (545)
T 1a6d_A 376 GTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGID 455 (545)
T ss_dssp SSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999 9999999999999999999876 78999999999999999999999999999
Q ss_pred HHHHHHHHHhcC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCccCCCC-CCCCC
Q 016787 297 GAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEA-PGGMG 372 (382)
Q Consensus 297 ~~~vi~~l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~-~~~~~ 372 (382)
+.+++++|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|++++.+ +|+.|
T Consensus 456 ~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~ 535 (545)
T 1a6d_A 456 PINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKSTPPSGQGGQGQ 535 (545)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC----------------
T ss_pred HHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCC
Confidence 999999999876 35899999999999999999999999999999999999999999999999988773321 23226
Q ss_pred CCCCCCC-CCC
Q 016787 373 GMGGMGG-MDY 382 (382)
Q Consensus 373 ~~~~~~~-~~~ 382 (382)
|||| || |||
T Consensus 536 ~~~~-~~~~~~ 545 (545)
T 1a6d_A 536 GMPG-GGMPEY 545 (545)
T ss_dssp -----------
T ss_pred CCCC-CCCCCC
Confidence 7877 44 444
No 9
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2.3e-67 Score=546.46 Aligned_cols=325 Identities=21% Similarity=0.324 Sum_probs=268.7
Q ss_pred EEEEeCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC-------------CCCHHHHHHHH----
Q 016787 10 ITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAVVRVL---- 72 (382)
Q Consensus 10 i~~~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------I~~~~~l~~~l---- 72 (382)
|.+.+|+++.|+ ++++|++|++++.+| +|+++++||+||++|++ |++++++.+++
T Consensus 206 I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~-------~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~ 277 (590)
T 3p9d_C 206 VEKIPGGDVLDS-RVLKGVLLNKDVVHP-------KMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEE 277 (590)
T ss_dssp EEEESSCCGGGC-BCCSSEEECCCCSCT-------TSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHH
T ss_pred EEEecCCCcccc-eeeeEEEEecccCCC-------CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHH
Confidence 345579999886 899999999998876 38899999999999995 34566665554
Q ss_pred -------HHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccc
Q 016787 73 -------ELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLE 145 (382)
Q Consensus 73 -------e~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~ 145 (382)
++|.+.|++|||++++|++.|+++|.+++ |+++ +++++++|+|||++|||+++++ ++
T Consensus 278 ~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~------I~av-----~~~~k~~le~ia~~TGa~iis~-----l~ 341 (590)
T 3p9d_C 278 EQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGG------CSVL-----RRVKKSDNNRIARVTGATIVNR-----VE 341 (590)
T ss_dssp HHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTT------CCCC-----CCCCHHHHHHHHHHHTCCCCSC-----ST
T ss_pred HHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhcc------ceee-----ccCCHHHHHHHHHHhCCceeec-----cc
Confidence 68899999999999999999999999988 4554 4778999999999999999998 99
Q ss_pred cCCcCCCce-eeEEE---EecceEEEEcCCCChhh--------------------------HHHHHHHHHHHHhhcCChH
Q 016787 146 KVNLDMLGT-CKKVT---ISKDDTVILDGAGDKKS--------------------------IEERCEQIRSAIENSTSDY 195 (382)
Q Consensus 146 ~l~~~~lG~-~~~v~---i~~~~~~~~~~~~~~~~--------------------------i~~~~~~l~~~~~~~~s~~ 195 (382)
++++++||+ |++|+ +++++|+||++|++++. ++.|+++++.+++.+.|+|
T Consensus 342 ~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~ 421 (590)
T 3p9d_C 342 DLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHH 421 (590)
T ss_dssp TCCTTSCBCCCSEEECCEETTEECEEECC---------------------------------------------------
T ss_pred CCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHH
Confidence 999999999 99998 45799999999998888 9999999999999999999
Q ss_pred HHHHHHHHHhhhcCCeEEEEecCCchhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHH
Q 016787 196 DKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKI 273 (382)
Q Consensus 196 ~~~~l~~rl~~l~g~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~ 273 (382)
+++ +++|+|++|||+|||+|+.+++|++|+++|||+++|++++++ +|||||++|+++|..|++++.+ ++++|+
T Consensus 422 ~~~-----~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~ 496 (590)
T 3p9d_C 422 HHH-----HHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQW 496 (590)
T ss_dssp -----------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHH
T ss_pred HHH-----HHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHH
Confidence 866 578999999999999999999999999999999999999996 9999999999999999998766 789999
Q ss_pred HHHHHHHHhhhhHHHHHHHcCCCHHHHHHHHHhcC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHh
Q 016787 274 GVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLM 350 (382)
Q Consensus 274 ~~~~~a~AL~~ip~~L~~NaG~d~~~vi~~l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~i 350 (382)
++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|
T Consensus 497 ~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~i 576 (590)
T 3p9d_C 497 PYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLL 576 (590)
T ss_dssp HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999976 568999999999999999999999999999999999999999
Q ss_pred hchhhhhccCCcc
Q 016787 351 TTTEAIVVELPKE 363 (382)
Q Consensus 351 L~id~iI~~~~~~ 363 (382)
||||++|...|+.
T Consensus 577 L~id~ii~~~~~~ 589 (590)
T 3p9d_C 577 LRVDDIVSGVRKQ 589 (590)
T ss_dssp TSEEEEECCCC--
T ss_pred HHHHHHHhcCCCC
Confidence 9999999887654
No 10
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=7.5e-65 Score=525.69 Aligned_cols=307 Identities=24% Similarity=0.370 Sum_probs=276.0
Q ss_pred cccCCC--ce-------EEEE--eCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC---------
Q 016787 2 EKVGKE--GV-------ITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK--------- 61 (382)
Q Consensus 2 ~~~G~~--g~-------i~~~--~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~--------- 61 (382)
.+||++ |+ |.++ +|+++.|+ ++++|++|+++|.||+ |+++++||+|+++|++
T Consensus 190 ~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~d~~Le~~k~e~~ 261 (553)
T 3ko1_A 190 TQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPG-------MPKRLENAKIALIDASLEVEKPELD 261 (553)
T ss_dssp HHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTT-------SCSCCBSCEEEEECSCBSCCCCTTT
T ss_pred HHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCC-------CccccccceEEEecCcccccCcccC
Confidence 356665 87 6665 78888775 9999999999999998 5778999999999994
Q ss_pred ----CCCHHH-----------HHHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHH
Q 016787 62 ----ISNLTA-----------VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQD 126 (382)
Q Consensus 62 ----I~~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~ 126 (382)
|+++++ +.+++++|.+.|+||||++++|++.++++|.+++ |++|+ ++++++|+|
T Consensus 262 ~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~g------I~~v~-----~v~k~~ler 330 (553)
T 3ko1_A 262 AEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKG------VLAVR-----RAKKSDLEK 330 (553)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHT------CEEEC-----CCCHHHHHH
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcc------hhhhh-----hhhhhhHHH
Confidence 677777 4567899999999999999999999999999877 67887 557999999
Q ss_pred HHHHHCCeEeccCCCCccccCCcCCCceeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHH
Q 016787 127 LAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQER 203 (382)
Q Consensus 127 la~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~r 203 (382)
||++|||+++++ ++++++++||+|+.|++. +++|+||.+|+++
T Consensus 331 ia~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~----------------------------- 376 (553)
T 3ko1_A 331 LARATGGRVVSN-----IDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP----------------------------- 376 (553)
T ss_dssp HHTTTTCCEESC-----GGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS-----------------------------
T ss_pred HHHhhCCeeecc-----cccCChhhcchHHHHHHhhcCcceEEEeccCCCC-----------------------------
Confidence 999999999999 999999999999999976 7899999999864
Q ss_pred HhhhcCCeEEEEecCCchhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHH
Q 016787 204 LAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNA 281 (382)
Q Consensus 204 l~~l~g~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~A 281 (382)
..|||+|||+|+.+++|++|+++||||++|+++++| +|||||++|++|+..|++++.+ ++++|+++++|++|
T Consensus 377 ------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~A 450 (553)
T 3ko1_A 377 ------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANA 450 (553)
T ss_dssp ------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred ------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHH
Confidence 478999999999999999999999999999999999 9999999999999999999876 88999999999999
Q ss_pred hhhhHHHHHHHcCCCHHHHHHHHHhcC---C-CceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhh
Q 016787 282 LKTPVHTIAANAGVEGAVVVGKLLEQD---N-TDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIV 357 (382)
Q Consensus 282 L~~ip~~L~~NaG~d~~~vi~~l~~~~---~-~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI 357 (382)
|+.||++||+|||+|+.+++.+|++.| + .++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|
T Consensus 451 Le~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii 530 (553)
T 3ko1_A 451 LESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVV 530 (553)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEEC
T ss_pred HHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHH
Confidence 999999999999999999999999987 2 679999999999999999999999999999999999999999999999
Q ss_pred ccCCccCCCC
Q 016787 358 VELPKEEKEA 367 (382)
Q Consensus 358 ~~~~~~~~~~ 367 (382)
..+|++.|.+
T Consensus 531 ~~~~~~~~~~ 540 (553)
T 3ko1_A 531 SAGKKSGGES 540 (553)
T ss_dssp CC--------
T ss_pred HhhhhccCCC
Confidence 9988776653
No 11
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1e-64 Score=524.69 Aligned_cols=299 Identities=20% Similarity=0.365 Sum_probs=272.8
Q ss_pred EEEE--eCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC-------------CCCHHHH------
Q 016787 10 ITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV------ 68 (382)
Q Consensus 10 i~~~--~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------I~~~~~l------ 68 (382)
|.++ +|++++|+ ++++|++|+++|.||+ |++.++||+||+++++ |++++++
T Consensus 198 I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~ 269 (543)
T 1a6d_B 198 IQVVKKQGGAIDDT-QLINGIIVDKEKVHPG-------MPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQ 269 (543)
T ss_dssp EEEEEEESSCGGGC-EEESEEEESCCCSSTT-------SCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHH
T ss_pred EEEEEecCCCccce-eEEccEEEecCCCCCC-------CcceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHH
Confidence 6666 99999986 9999999999999998 4677999999999999 7777775
Q ss_pred -----HHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCc
Q 016787 69 -----VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMD 143 (382)
Q Consensus 69 -----~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~ 143 (382)
.+++++|.+.|+||||++++|++.|+++|..|+ |+||+ ++++++|+|||++|||+++++
T Consensus 270 E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~v~k~~le~ia~~tGa~iis~----- 333 (543)
T 1a6d_B 270 EENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAVR-----RVKKSDMDKLAKATGASIVST----- 333 (543)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCEESC-----
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCceecc-----
Confidence 788999999999999999999999999999998 68887 667999999999999999998
Q ss_pred cccCCcCCCceeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCc
Q 016787 144 LEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGAS 220 (382)
Q Consensus 144 l~~l~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t 220 (382)
++++++++||+|+.|++. +++|+||++|++ +.+|||+|||+|
T Consensus 334 l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~t 378 (543)
T 1a6d_B 334 IDEISSSDLGTAERVEQVKVGEDYMTFVTGCKN-----------------------------------PKAVSILVRGET 378 (543)
T ss_dssp GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESS-----------------------------------SSCEEEEEEESS
T ss_pred cccCCHHHCCCceEEEEEEecCceEEEEecCCC-----------------------------------CceEEEEecCCC
Confidence 999999999999999986 789999999875 368999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHHcCCCHH
Q 016787 221 EAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGA 298 (382)
Q Consensus 221 ~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~ 298 (382)
+.+++|++|+++|||+++|+++++| +|||||++|++++..|++++.+ ++++|+++++|++||+.||++||+|||+|+.
T Consensus 379 ~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~ 458 (543)
T 1a6d_B 379 EHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPI 458 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChH
Confidence 9999999999999999999999999 9999999999999999999866 7899999999999999999999999999999
Q ss_pred HHHHHHHhcC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCccCCCC
Q 016787 299 VVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEA 367 (382)
Q Consensus 299 ~vi~~l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~ 367 (382)
+++++|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++.|++
T Consensus 459 ~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~ 530 (543)
T 1a6d_B 459 DILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSSSSN 530 (543)
T ss_dssp HHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC---------
T ss_pred HHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCC
Confidence 9999999876 35899999999999999999999999999999999999999999999999988765554
No 12
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.8e-63 Score=512.21 Aligned_cols=301 Identities=24% Similarity=0.348 Sum_probs=277.3
Q ss_pred cccCCC---ceEEEE--eCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEecc--------------CC
Q 016787 2 EKVGKE---GVITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEK--------------KI 62 (382)
Q Consensus 2 ~~~G~~---g~i~~~--~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~--------------~I 62 (382)
.+||++ |+|.++ +|++..|+ ++++|++|+++|.+| |+++++||+||++|+ +|
T Consensus 175 ~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~~~~Le~~k~e~~~~~v~i 245 (513)
T 3iyg_B 175 LRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIANTGMDTDKIKIFGSRVRV 245 (513)
T ss_pred HHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEEcCCcccccccccCCceEE
Confidence 457777 888775 58988886 999999999999886 788999999999999 36
Q ss_pred CCHHHHHH-----------HHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHH
Q 016787 63 SNLTAVVR-----------VLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLT 131 (382)
Q Consensus 63 ~~~~~l~~-----------~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~t 131 (382)
++++++.+ ++++|.++|+||||++++|++.++++|..++ |+|||+|+ +.+|+|||++|
T Consensus 246 ss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~------I~av~~~~-----~~~le~ia~~t 314 (513)
T 3iyg_B 246 DSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAG------VMAIEHAD-----FVGVERLALVT 314 (513)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcC------ceEEecCC-----HHHHHHHHHHh
Confidence 67777654 6899999999999999999999999999887 79999886 57899999999
Q ss_pred CCeEeccCCCCccccCCcCCCceeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhc
Q 016787 132 GGDLITEELGMDLEKVNLDMLGTCKKVT---ISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLS 208 (382)
Q Consensus 132 G~~ii~~~~~~~l~~l~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~ 208 (382)
||+++++ ++++++++||+|++|+ ++++++++|.+|++
T Consensus 315 Ga~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------------------------- 354 (513)
T 3iyg_B 315 GGEIAST-----FDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL----------------------------------- 354 (513)
T ss_pred CCEEecc-----cccCCHhHCCcccEEEEEEECCeEEEEEecCCC-----------------------------------
Confidence 9999999 9999999999999999 55789999999874
Q ss_pred CCeEEEEecCCchhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhH
Q 016787 209 GGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPV 286 (382)
Q Consensus 209 g~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip 286 (382)
+++|||+|||+|+.+++|++|+++|||+++|++++++ +|||||++|++|+..|++++.+ ++++|+++++|++||+.||
T Consensus 355 ~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip 434 (513)
T 3iyg_B 355 GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLP 434 (513)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999996 9999999999999999999876 8899999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHhcC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCc
Q 016787 287 HTIAANAGVEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK 362 (382)
Q Consensus 287 ~~L~~NaG~d~~~vi~~l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~ 362 (382)
++||+|||+|+.+++++|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..+|+
T Consensus 435 ~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 435 TIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999987 467999999999999999999999999999999999999999999999988653
No 13
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2e-63 Score=511.79 Aligned_cols=303 Identities=17% Similarity=0.261 Sum_probs=275.9
Q ss_pred cccCCC---ceEEEE--eCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC-------------CC
Q 016787 2 EKVGKE---GVITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------IS 63 (382)
Q Consensus 2 ~~~G~~---g~i~~~--~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------I~ 63 (382)
.+||.+ |+|.++ +|++..|+ ++++|++|+++|.||||++ +|.+++||+||++|++ |+
T Consensus 175 ~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~----~p~~~en~kIll~~~~Le~~k~e~~~~v~is 249 (515)
T 3iyg_H 175 MMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEM----QPKKYHNPMIALLNVELELKAEKDNAEIRVH 249 (515)
T ss_pred HHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCccccc----CCccccccEEEEEcccccccccccCceEEeC
Confidence 346666 787665 58888875 9999999999999999864 4568999999999995 67
Q ss_pred CHHHH-----------HHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHC
Q 016787 64 NLTAV-----------VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTG 132 (382)
Q Consensus 64 ~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG 132 (382)
+++++ .+++++|.+.|+||||++++|++.++++|.+++ |++++ ++++++|+|||++||
T Consensus 250 ~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~g------I~~v~-----~~~k~~leria~~tG 318 (515)
T 3iyg_H 250 TVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRD------MFCAG-----RVPEEDLKRTMMACG 318 (515)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcC------Ccccc-----cccHHHHHHHHHHhC
Confidence 77776 566899999999999999999999999998776 45665 667999999999999
Q ss_pred CeEeccCCCCccccCCcCCCceeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcC
Q 016787 133 GDLITEELGMDLEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSG 209 (382)
Q Consensus 133 ~~ii~~~~~~~l~~l~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g 209 (382)
|+++++ ++++++++||+|+.|++. +++++||++|+++
T Consensus 319 a~ii~~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~----------------------------------- 358 (515)
T 3iyg_H 319 GSIQTS-----VNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA----------------------------------- 358 (515)
T ss_pred CEEeec-----cccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC-----------------------------------
Confidence 999999 999999999999999976 6899999998763
Q ss_pred CeEEEEecCCchhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHH
Q 016787 210 GVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVH 287 (382)
Q Consensus 210 ~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~ 287 (382)
..|||+|||+|+.+++|++|+++||||++|++++++ +|||||++|++++..|++++.+ ++++|+++++|++||+.||+
T Consensus 359 ~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~ 438 (515)
T 3iyg_H 359 KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPR 438 (515)
T ss_pred ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999999996 9999999999999999999877 88999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHhcC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccC
Q 016787 288 TIAANAGVEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVEL 360 (382)
Q Consensus 288 ~L~~NaG~d~~~vi~~l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~ 360 (382)
+||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.++
T Consensus 439 ~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 439 QLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred HHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987 3579999999999999999999999999999999999999999999999764
No 14
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.8e-63 Score=512.40 Aligned_cols=298 Identities=18% Similarity=0.269 Sum_probs=269.5
Q ss_pred EEEEeCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccCC-------------CCHHH---------
Q 016787 10 ITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI-------------SNLTA--------- 67 (382)
Q Consensus 10 i~~~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I-------------~~~~~--------- 67 (382)
|.+.+|+++.|+ ++++|++|+++|.||+ |++.++||+|+++++++ +++++
T Consensus 191 I~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~ 262 (529)
T 3iyg_A 191 VLKAHGRSQMES-MLINGYALNCVVGSQG-------MPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRES 262 (529)
T ss_pred EEEecCCCccce-EEEeeeEEecCccccc-------CCcccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHH
Confidence 445689998885 9999999999999997 56789999999999974 34433
Q ss_pred --HHHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCc-c
Q 016787 68 --VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMD-L 144 (382)
Q Consensus 68 --l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~-l 144 (382)
+.+++++|.+.|+||||++++|++.++++|.+|+ |+||+ ++++++|+|||++|||+++++..+++ .
T Consensus 263 ~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~-----~v~k~~leria~~tGa~iv~~~~~l~~~ 331 (529)
T 3iyg_A 263 DITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAVR-----RVLKRDLKRIAKASGATVLSTLANLEGE 331 (529)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Cceec-----cCCHHHHHHHHHHhCCeeecchhcccch
Confidence 4577899999999999999999999999999998 68888 56799999999999999999943333 2
Q ss_pred ccCCcCCCceeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCch
Q 016787 145 EKVNLDMLGTCKKVT---ISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASE 221 (382)
Q Consensus 145 ~~l~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t~ 221 (382)
+++++++||+|+.|+ +++++++||.+|+++ .+|||+|||+|+
T Consensus 332 e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~ 376 (529)
T 3iyg_A 332 ETFEASMLGQAEEVVQERICDDELILIKNTKAR-----------------------------------TSASVILRGAND 376 (529)
T ss_pred hccChhhCccceEEEEEEeCCceEEEEEcCCCC-----------------------------------ceEEEEECCchH
Confidence 445678899999999 668899999998763 489999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHHcCCCHHH
Q 016787 222 AEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAV 299 (382)
Q Consensus 222 ~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~ 299 (382)
.+++|.+|+++|||+++|+++++| +|||||++|++||.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.+
T Consensus 377 ~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~ 456 (529)
T 3iyg_A 377 FMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTD 456 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 999999999999999999999999 9999999999999999999877 78999999999999999999999999999999
Q ss_pred HHHHHHhcC---C--------CceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCC
Q 016787 300 VVGKLLEQD---N--------TDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELP 361 (382)
Q Consensus 300 vi~~l~~~~---~--------~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~ 361 (382)
++++|++.| + .++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..+|
T Consensus 457 ~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 457 LVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred HHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 999999977 2 5799999999999999999999999999999999999999999999998743
No 15
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.1e-63 Score=507.91 Aligned_cols=292 Identities=20% Similarity=0.318 Sum_probs=270.1
Q ss_pred EEEEeCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEecc-------------CCCCHHHHHHHHH---
Q 016787 10 ITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEK-------------KISNLTAVVRVLE--- 73 (382)
Q Consensus 10 i~~~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~-------------~I~~~~~l~~~le--- 73 (382)
|.+.+|++++|+ ++++|++|+++|.||. |+++++||+|+++++ +|++++++.++++
T Consensus 189 I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~ 260 (515)
T 3iyg_G 189 VEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEE 260 (515)
T ss_pred EEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHH
Confidence 455689999876 8999999999999985 788999999999999 4678888887776
Q ss_pred --------HHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccc
Q 016787 74 --------LALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLE 145 (382)
Q Consensus 74 --------~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~ 145 (382)
+|.+.|++|||++++|++.++++|.+++ |+||+ ++++++|+|||++|||+++++ ++
T Consensus 261 ~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~leria~~tGa~ii~~-----l~ 324 (515)
T 3iyg_G 261 EYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRAN------ITAIR-----RVRKTDNNRIARACGARIVSR-----PE 324 (515)
T ss_pred HHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCC------ceeec-----cCCHHHHHHHHHHhCCeeecc-----cc
Confidence 8999999999999999999999998877 67775 667999999999999999999 99
Q ss_pred cCCcCCCce-eeEEEEec---ceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCch
Q 016787 146 KVNLDMLGT-CKKVTISK---DDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASE 221 (382)
Q Consensus 146 ~l~~~~lG~-~~~v~i~~---~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t~ 221 (382)
++++++||+ |+.|++.+ ++|+||++|+++ ..|||+|||+|+
T Consensus 325 ~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~-----------------------------------~~~TIllrG~t~ 369 (515)
T 3iyg_G 325 ELREEDVGTGAGLLEIKKIGDEYFTFITECKDP-----------------------------------KACTILLRGASK 369 (515)
T ss_pred ccChhhcCCcccEEEEEEECCceEEEEeCCCCC-----------------------------------CeEEEEEcCCCH
Confidence 999999999 99999764 589999999864 479999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHHcCCCHHH
Q 016787 222 AEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAV 299 (382)
Q Consensus 222 ~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~ 299 (382)
.+++|.+|+++|||+++|++++++ +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.+
T Consensus 370 ~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~ 449 (515)
T 3iyg_G 370 EILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIR 449 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 999999999999999999999877 9999999999999999999877 89999999999999999999999999999999
Q ss_pred HHHHHHhcC----CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccC
Q 016787 300 VVGKLLEQD----NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVEL 360 (382)
Q Consensus 300 vi~~l~~~~----~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~ 360 (382)
++++|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...
T Consensus 450 ~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 450 LLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred HHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 999999877 3579999999999999999999999999999999999999999999999764
No 16
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=9.5e-65 Score=524.98 Aligned_cols=303 Identities=17% Similarity=0.248 Sum_probs=275.1
Q ss_pred ceEEEEeCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC-------------CCCHHHHHH----
Q 016787 8 GVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAVVR---- 70 (382)
Q Consensus 8 g~i~~~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------I~~~~~l~~---- 70 (382)
|++.+. |++++|+ ++++|++|+++|.||||++ |+..++||+||++|++ |++++++.+
T Consensus 200 ~Vikv~-Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~ 273 (550)
T 3p9d_G 200 GIKKIP-GGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDA 273 (550)
T ss_dssp CCCBCC-SSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHH
T ss_pred eEEEec-CCCccce-eEEeeEEEecccccccccc----CcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHH
Confidence 777665 9999997 9999999999999999864 5667999999999998 456666544
Q ss_pred -------HHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCc
Q 016787 71 -------VLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMD 143 (382)
Q Consensus 71 -------~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~ 143 (382)
++++|.++|++|||++++|++.++++|.+++ |++++ ++++++|++||++||++++++
T Consensus 274 E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~g------I~~v~-----~v~k~~lerIa~~tGa~iis~----- 337 (550)
T 3p9d_G 274 EWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRN------IFCAG-----RVSADDMNRVIQAVGGSIQST----- 337 (550)
T ss_dssp HHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGT------CEEEE-----CCCTTHHHHHHHHTCCCCBSS-----
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcC------Ccccc-----CcCHHHHHHHHHHhCCceecc-----
Confidence 6788999999999999999999999997766 57776 557899999999999999999
Q ss_pred cccCCcCCCceeeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCc
Q 016787 144 LEKVNLDMLGTCKKVTI---SKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGAS 220 (382)
Q Consensus 144 l~~l~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t 220 (382)
++++++++||+|+.|++ .++++++|.+|+++ ++|||+|||+|
T Consensus 338 l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~-----------------------------------~~~tI~lrG~t 382 (550)
T 3p9d_G 338 TSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA-----------------------------------KTCTLLLRGGA 382 (550)
T ss_dssp GGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC-----------------------------------CCCCCCBCSSS
T ss_pred hhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC-----------------------------------ceeEEEEeCCc
Confidence 99999999999999997 46899999998753 58999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHHcCCCHH
Q 016787 221 EAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGA 298 (382)
Q Consensus 221 ~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~ 298 (382)
+.+++|+||+++||||++|+++++| +|||||++|++++..|++++.+ ++++|+++++|++||+.||++||+|||+|+.
T Consensus 383 e~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~ 462 (550)
T 3p9d_G 383 EQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAI 462 (550)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 9999999999999999999999999 9999999999999999999776 8899999999999999999999999999999
Q ss_pred HHHHHHHhcC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCccCCCC
Q 016787 299 VVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEA 367 (382)
Q Consensus 299 ~vi~~l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~ 367 (382)
+++++|++.| ++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..+|+++++.
T Consensus 463 ~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~~ 534 (550)
T 3p9d_G 463 EILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESANA 534 (550)
T ss_dssp HHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC----
T ss_pred HHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCcccccC
Confidence 9999999876 56899999999999999999999999999999999999999999999999988776543
No 17
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.4e-63 Score=517.03 Aligned_cols=302 Identities=20% Similarity=0.346 Sum_probs=275.5
Q ss_pred EEEeCCccceeeEEEEeEEEeecccCcccccccccCceeec--CceEEEeccCC-------------CCHHH--------
Q 016787 11 TIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELE--DPLILVHEKKI-------------SNLTA-------- 67 (382)
Q Consensus 11 ~~~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~--~p~Ill~d~~I-------------~~~~~-------- 67 (382)
.+.+|++++|+ ++++|++|+++|.||+ |+++++ ||+|++++++| +++++
T Consensus 206 ~k~~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E 277 (559)
T 3p9d_A 206 LKAHGKSATES-LLVPGYALNCTVASQA-------MPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKRE 277 (559)
T ss_dssp EEEESSCSSCC-BCCSEECCCCCCSSTT-------SCSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHH
T ss_pred EEecCCCccce-eEeccEEEeecccCCC-------cceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHH
Confidence 34459999985 8999999999999998 577888 99999999986 34444
Q ss_pred ---HHHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCcc
Q 016787 68 ---VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDL 144 (382)
Q Consensus 68 ---l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l 144 (382)
+.+++++|.++|+||||++++|+++|+++|..|+ |++|+ ++++++|+|||++|||+++++..++.+
T Consensus 278 ~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~ 346 (559)
T 3p9d_A 278 AGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------IMGVR-----RCKKEDLRRIARATGATLVSSMSNLEG 346 (559)
T ss_dssp HHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------CEEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTT
T ss_pred HHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------CceEc-----cCCHHHHHHHHHHhCCEEEeccccccc
Confidence 6788999999999999999999999999999999 68887 567999999999999999999555544
Q ss_pred -ccCCcCCCceeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCc
Q 016787 145 -EKVNLDMLGTCKKVT---ISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGAS 220 (382)
Q Consensus 145 -~~l~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t 220 (382)
+++++++||+|++|+ +++++|+||.+|++ +++|||+|||+|
T Consensus 347 ~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~tI~lrG~t 391 (559)
T 3p9d_A 347 EETFESSYLGLCDEVVQAKFSDDECILIKGTSK-----------------------------------HSSSSIILRGAN 391 (559)
T ss_dssp CCCCCTTTSCCEEEEEEEECSSCEEECEEEESS-----------------------------------SCCCCEEEEESC
T ss_pred cccCCHhHCccceEEEEEEEcCceEEEEEcCCC-----------------------------------CCEEEEEEcCCC
Confidence 789999999999999 46789999999875 468999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHHcCCCHH
Q 016787 221 EAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGA 298 (382)
Q Consensus 221 ~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~ 298 (382)
+.+++|++|+++|||+++|+++++| +|||||++|++|+.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.
T Consensus 392 e~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~ 471 (559)
T 3p9d_A 392 DYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSS 471 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Confidence 9999999999999999999999999 9999999999999999999877 7899999999999999999999999999999
Q ss_pred HHHHHHHhcC---CC------------ceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCcc
Q 016787 299 VVVGKLLEQD---NT------------DLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 363 (382)
Q Consensus 299 ~vi~~l~~~~---~~------------~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~ 363 (382)
+++.+|++.| +. ++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|++
T Consensus 472 ~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 551 (559)
T 3p9d_A 472 ELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEP 551 (559)
T ss_dssp HHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCC
T ss_pred HHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCcc
Confidence 9999999876 33 79999999999999999999999999999999999999999999999998776
Q ss_pred CCC
Q 016787 364 EKE 366 (382)
Q Consensus 364 ~~~ 366 (382)
++.
T Consensus 552 ~~~ 554 (559)
T 3p9d_A 552 PKE 554 (559)
T ss_dssp CCC
T ss_pred ccc
Confidence 644
No 18
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.6e-62 Score=502.92 Aligned_cols=289 Identities=18% Similarity=0.280 Sum_probs=265.2
Q ss_pred EEeCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC-------------CCCHHHH----------
Q 016787 12 IHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV---------- 68 (382)
Q Consensus 12 ~~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------I~~~~~l---------- 68 (382)
+.+|+++.|+ ++++|++|+++|.||+| ++.+++|+|++++++ |++++++
T Consensus 191 k~~Ggs~~ds-~lv~G~~~dk~~~~~~m-------~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~ 262 (515)
T 3iyg_E 191 GKVGGRLEDT-KLIKGVIVDKDFSHPQM-------PKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEK 262 (515)
T ss_pred EecCCCcccc-eEEeeEEEecccccccc-------cccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHH
Confidence 3468998885 99999999999999985 555678888887776 5566765
Q ss_pred -HHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccccC
Q 016787 69 -VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKV 147 (382)
Q Consensus 69 -~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~~l 147 (382)
.++++++.+.|+||||++++|+++|+++|..|+ +.+++++ ++++|+|||++|||+++++ ++++
T Consensus 263 l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~------I~~v~~v-----~k~~le~ia~~tGa~ii~~-----l~~l 326 (515)
T 3iyg_E 263 FEEMIRQIKETGANLAVCQWGFDDEANHLLLQND------LPAVRWV-----GGPEIELIAIATGGRIVPR-----FSEL 326 (515)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEecc-----cccC
Confidence 578999999999999999999999999999999 5778755 5899999999999999999 9999
Q ss_pred CcCCCceeeEEEE-----ecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCchh
Q 016787 148 NLDMLGTCKKVTI-----SKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEA 222 (382)
Q Consensus 148 ~~~~lG~~~~v~i-----~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t~~ 222 (382)
++++||+|++|++ ++++++||++|+++ ..|||+|||+|+.
T Consensus 327 ~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~-----------------------------------~~~tI~lrG~te~ 371 (515)
T 3iyg_E 327 TAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS-----------------------------------RAVTIFIRGGNKM 371 (515)
T ss_pred CHHHCCcceEEEEEEeccccceEEEEEcCCCC-----------------------------------ceEEEEEeCCcHH
Confidence 9999999999997 45899999999864 4789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHHcCCCHHHH
Q 016787 223 EVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAVV 300 (382)
Q Consensus 223 ~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~v 300 (382)
+++|++|+++|||+++|+++++| +|||||++|++++..|++++.+ ++++|+++++|++||+.||++||+|||+|+.++
T Consensus 372 ~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~ 451 (515)
T 3iyg_E 372 IIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQT 451 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999 9999999999999999999877 789999999999999999999999999999999
Q ss_pred HHHHHhcC----CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhcc
Q 016787 301 VGKLLEQD----NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 359 (382)
Q Consensus 301 i~~l~~~~----~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~ 359 (382)
+.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.+
T Consensus 452 v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 452 MTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred HHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 99999875 367999999999999999999999999999999999999999999999975
No 19
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.2e-61 Score=499.02 Aligned_cols=300 Identities=19% Similarity=0.275 Sum_probs=271.1
Q ss_pred cccCC---Cce-----EEEE--eCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccCC---------
Q 016787 2 EKVGK---EGV-----ITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI--------- 62 (382)
Q Consensus 2 ~~~G~---~g~-----i~~~--~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I--------- 62 (382)
.+||+ +|. |.++ +|++..|+ ++++|++|+++|.| . ||..++||+|+++++++
T Consensus 171 ~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~~Le~~k~~~~~ 241 (518)
T 3iyg_D 171 MKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQFCLSAPKTDMDN 241 (518)
T ss_pred HHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEEeeccccccccCc
Confidence 34664 666 5544 68888875 99999999999987 3 67778999999999975
Q ss_pred ----CCHHH-----------HHHHHHHHHHcCCCEEEE-----ecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhh
Q 016787 63 ----SNLTA-----------VVRVLELALKRQRPLLIV-----AEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKA 122 (382)
Q Consensus 63 ----~~~~~-----------l~~~le~i~~~~~~lvI~-----~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~ 122 (382)
+++++ +.+++++|.+.|+||||+ +++|++.++++|..|+ |+||++|+ +.
T Consensus 242 ~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~------I~av~~~~-----~~ 310 (518)
T 3iyg_D 242 QIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMK------IMVVKDIE-----RE 310 (518)
T ss_pred eEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcC------cEEEecCC-----HH
Confidence 34543 578899999999999999 8999999999999988 79999886 56
Q ss_pred hHHHHHHHHCCeEeccCCCCccccCCcCCCceeeEEEEe---c-ceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHH
Q 016787 123 NMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTIS---K-DDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKE 198 (382)
Q Consensus 123 ~le~la~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i~---~-~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~ 198 (382)
+|+|||++|||+++++ ++++++++||+|+.|++. + +++++|++|++
T Consensus 311 ~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~------------------------- 360 (518)
T 3iyg_D 311 DIEFICKTIGTKPVAH-----VDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS------------------------- 360 (518)
T ss_pred HHHHHHHHhCCEEecc-----cccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC-------------------------
Confidence 8999999999999999 999999999999999975 3 57889999864
Q ss_pred HHHHHHhhhcCCeEEEEecCCchhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHH
Q 016787 199 KLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQ 276 (382)
Q Consensus 199 ~l~~rl~~l~g~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~ 276 (382)
++++|||+|||+|+.+++|++|+++|||+++|+++++| +|||||++|++++..|++++.+ ++++|++++
T Consensus 361 ---------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~ 431 (518)
T 3iyg_D 361 ---------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIR 431 (518)
T ss_pred ---------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHH
Confidence 24689999999999999999999999999999999999 9999999999999999999876 889999999
Q ss_pred HHHHHhhhhHHHHHHHcCCCHHHHHHHHHhcC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhch
Q 016787 277 IIQNALKTPVHTIAANAGVEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTT 353 (382)
Q Consensus 277 ~~a~AL~~ip~~L~~NaG~d~~~vi~~l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~i 353 (382)
+|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++||||
T Consensus 432 ~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 511 (518)
T 3iyg_D 432 AFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKI 511 (518)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999976 457999999999999999999999999999999999999999999
Q ss_pred hhhhccC
Q 016787 354 EAIVVEL 360 (382)
Q Consensus 354 d~iI~~~ 360 (382)
|++|+.+
T Consensus 512 D~ii~~~ 518 (518)
T 3iyg_D 512 DDVVNTR 518 (518)
T ss_pred cceEecC
Confidence 9999763
No 20
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=3.4e-62 Score=507.02 Aligned_cols=301 Identities=18% Similarity=0.276 Sum_probs=269.0
Q ss_pred EEEEeCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC-------------CCCHHH---------
Q 016787 10 ITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTA--------- 67 (382)
Q Consensus 10 i~~~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------I~~~~~--------- 67 (382)
|.+.+|++++|+ ++++|++|+++|.||+|+++.+ .+..+++|+|++++++ |+++++
T Consensus 226 I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~ 303 (562)
T 3p9d_E 226 MQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQ 303 (562)
T ss_dssp EEEESSSCGGGC-EEESSEEESSCCCTTSCCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHH
T ss_pred EEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHH
Confidence 345579999986 9999999999999999765532 1222489999998886 345555
Q ss_pred --HHHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccc
Q 016787 68 --VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLE 145 (382)
Q Consensus 68 --l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~ 145 (382)
+.+++++|.+.|+||||++++|+++++++|..|+ |.+|+++ ++++|+|||++|||+++++ ++
T Consensus 304 ~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~------I~~v~~v-----~k~~le~ia~~TGa~iis~-----l~ 367 (562)
T 3p9d_E 304 DKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQND------LPAVRWV-----GGQELEHIAISTNGRIVPR-----FQ 367 (562)
T ss_dssp HHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTT------CCCEECC-----CTTTHHHHHHHHCCCEEES-----SS
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEEec-----cc
Confidence 5688999999999999999999999999999999 4577755 5889999999999999999 99
Q ss_pred cCCcCCCceeeEEEE-----ecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCc
Q 016787 146 KVNLDMLGTCKKVTI-----SKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGAS 220 (382)
Q Consensus 146 ~l~~~~lG~~~~v~i-----~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t 220 (382)
++++++||+|+.|++ ++++++||++|+++ ..|||+|||+|
T Consensus 368 ~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~-----------------------------------~~~TIllrG~t 412 (562)
T 3p9d_E 368 DLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET-----------------------------------KTVTCFVRGSN 412 (562)
T ss_dssp CCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC-----------------------------------SCCEEEEECTT
T ss_pred cCCHHHCCcceEEEEEEeccCCceEEEEecCCCC-----------------------------------CeEEEEEeCCC
Confidence 999999999999998 35899999999864 47899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHHcCCCHH
Q 016787 221 EAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGA 298 (382)
Q Consensus 221 ~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~ 298 (382)
+.+++|+||+++|||+++|+++++| +|||||++|++|+..|++++.+ ++++|+++++|++||+.||++||+|||+|+.
T Consensus 413 e~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~ 492 (562)
T 3p9d_E 413 KMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPI 492 (562)
T ss_dssp TTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 9999999999999999999999999 9999999999999999999877 7899999999999999999999999999999
Q ss_pred HHHHHHHhcC----CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCcc
Q 016787 299 VVVGKLLEQD----NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 363 (382)
Q Consensus 299 ~vi~~l~~~~----~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~ 363 (382)
+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.+++.+
T Consensus 493 ~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~ 561 (562)
T 3p9d_E 493 GTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKDE 561 (562)
T ss_dssp HHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC--
T ss_pred HHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 9999999865 4689999999999999999999999999999999999999999999999886543
No 21
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=4.5e-63 Score=510.47 Aligned_cols=304 Identities=20% Similarity=0.251 Sum_probs=275.9
Q ss_pred cccCC--CceEEEEe-------CCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccCCC---------
Q 016787 2 EKVGK--EGVITIHD-------GKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS--------- 63 (382)
Q Consensus 2 ~~~G~--~g~i~~~~-------G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I~--------- 63 (382)
.+||+ +|.|.+.. |++++|+ ++++|++|+++|.||+| |++.++||+|++++++|+
T Consensus 179 ~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~~~le~~k~~~~~~ 251 (528)
T 3p9d_D 179 LKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQFQISPPKPDTENN 251 (528)
T ss_dssp HTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEECCCSSCCCCSSEEE
T ss_pred HHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEEeccccccccccCce
Confidence 35666 57665544 9999885 99999999999999985 788999999999999876
Q ss_pred ----CHHH-----------HHHHHHHHHHcCCCEEEEecCC-----cHHHHHHHHHccccCCceEEEEecCCCCcchhhh
Q 016787 64 ----NLTA-----------VVRVLELALKRQRPLLIVAEDV-----ESEALATLILNKLRAGIKVCAIKAPGFGENRKAN 123 (382)
Q Consensus 64 ----~~~~-----------l~~~le~i~~~~~~lvI~~~~i-----~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~ 123 (382)
++++ +.+++++|.+.|+||||++++| ++.++++|..|+ |+||+ ++++++
T Consensus 252 i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~av~-----~~~k~~ 320 (528)
T 3p9d_D 252 IIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLN------IMVVK-----DIEREE 320 (528)
T ss_dssp EEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTS------CCEEE-----CCCTHH
T ss_pred EEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcC------cEEEE-----eCCHHH
Confidence 4443 6788999999999999999999 999999999887 68998 446899
Q ss_pred HHHHHHHHCCeEeccCCCCccccCCcCCCceeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHH
Q 016787 124 MQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKL 200 (382)
Q Consensus 124 le~la~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l 200 (382)
|+|||++|||+++++ ++++++++||+|+.|++. ++++++|.+|....
T Consensus 321 le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~------------------------- 370 (528)
T 3p9d_D 321 IEFLSKGLGCKPIAD-----IELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN------------------------- 370 (528)
T ss_dssp HHHHHHHHTCCCCSC-----STTCCSSSEEEESCEECCEETTEECCBCTTBCCGG-------------------------
T ss_pred HHHHHHHHCCEEecc-----cccCCHHHCCcccEEEEEEECCEEEEEEEcccccC-------------------------
Confidence 999999999999999 899999999999999965 56888898876310
Q ss_pred HHHHhhhcCCeEEEEecCCchhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHH
Q 016787 201 QERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQII 278 (382)
Q Consensus 201 ~~rl~~l~g~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~ 278 (382)
.+++|||+|||+|+.+++|+||+++|||+++|+++++| +|||||++|++|+..|++++.+ ++++|+++++|
T Consensus 371 -------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~ 443 (528)
T 3p9d_D 371 -------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEF 443 (528)
T ss_dssp -------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHH
T ss_pred -------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHH
Confidence 15789999999999999999999999999999999999 9999999999999999999876 89999999999
Q ss_pred HHHhhhhHHHHHHHcCCCHHHHHHHHHhcC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhh
Q 016787 279 QNALKTPVHTIAANAGVEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEA 355 (382)
Q Consensus 279 a~AL~~ip~~L~~NaG~d~~~vi~~l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~ 355 (382)
++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||+
T Consensus 444 a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ 523 (528)
T 3p9d_D 444 ASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDD 523 (528)
T ss_dssp HHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhH
Confidence 999999999999999999999999999987 47899999999999999999999999999999999999999999999
Q ss_pred hhccC
Q 016787 356 IVVEL 360 (382)
Q Consensus 356 iI~~~ 360 (382)
+|..+
T Consensus 524 ii~~~ 528 (528)
T 3p9d_D 524 IAFSR 528 (528)
T ss_dssp CCBCC
T ss_pred heecC
Confidence 99763
No 22
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.9e-61 Score=494.17 Aligned_cols=287 Identities=22% Similarity=0.348 Sum_probs=257.8
Q ss_pred EeCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccCCC-------------CHHHHH----------
Q 016787 13 HDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS-------------NLTAVV---------- 69 (382)
Q Consensus 13 ~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I~-------------~~~~l~---------- 69 (382)
.+|++..|+ ++++|++|+++|.||+ |+++++||+||+++++|+ +++++.
T Consensus 188 ~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i 259 (517)
T 3iyg_Z 188 MKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFI 259 (517)
T ss_pred ecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHH
Confidence 356777775 8999999999999997 788999999999999853 444433
Q ss_pred -HHHHHHHHcCCC--------E-EEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccC
Q 016787 70 -RVLELALKRQRP--------L-LIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEE 139 (382)
Q Consensus 70 -~~le~i~~~~~~--------l-vI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~ 139 (382)
..+++|...+.+ + ||++++|++.++++|.+++ |++|++ +++++|+|||++|||+++++
T Consensus 260 ~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~g------I~~v~~-----v~~~~leria~~tGa~iv~~- 327 (517)
T 3iyg_Z 260 EDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEG------IIALRR-----AKRRNMERLTLACGGIALNS- 327 (517)
T ss_pred HHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCC------CEEEEe-----cCHHHHHHHHHHhCCEEecc-
Confidence 345666655544 3 5667999999999999987 678884 46889999999999999999
Q ss_pred CCCccccCCcCC-CceeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEE
Q 016787 140 LGMDLEKVNLDM-LGTCKKVT---ISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLK 215 (382)
Q Consensus 140 ~~~~l~~l~~~~-lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~ 215 (382)
++++++++ ||+|+ |+ +++++++||++|+++ ..|||+
T Consensus 328 ----l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~ 367 (517)
T 3iyg_Z 328 ----LDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNP-----------------------------------RSVTLL 367 (517)
T ss_pred ----hhhCcccccCCcce-EEEEEEcCceEEEEeCCCCc-----------------------------------hhheee
Confidence 99999999 99999 94 567899999999864 368999
Q ss_pred ecCCchhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHHc
Q 016787 216 IGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANA 293 (382)
Q Consensus 216 lrG~t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~Na 293 (382)
|||+|+.+++|.||+++||||++|+++++| +|||||++|+++|..|++++.+ ++++|+++++|++||+.+|++||+||
T Consensus 368 lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~Na 447 (517)
T 3iyg_Z 368 IKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNS 447 (517)
T ss_pred ecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999 9999999999999999999877 89999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhcc
Q 016787 294 GVEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 359 (382)
Q Consensus 294 G~d~~~vi~~l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~ 359 (382)
|+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.+
T Consensus 448 G~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 448 GFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred CCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999987 467999999999999999999999999999999999999999999999965
No 23
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.1e-61 Score=492.16 Aligned_cols=299 Identities=18% Similarity=0.299 Sum_probs=267.3
Q ss_pred cccCCC-ceEEEE-------eCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC------------
Q 016787 2 EKVGKE-GVITIH-------DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK------------ 61 (382)
Q Consensus 2 ~~~G~~-g~i~~~-------~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~------------ 61 (382)
.+||++ |+|.++ +|+++.| +++++|++|+++|.+ |++.++||+|++++++
T Consensus 172 ~~V~~~~~~i~v~~I~i~k~~Ggs~~d-s~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~~~le~~~~e~k~~v 241 (512)
T 3iyg_Q 172 VSIFPDSGHFNVDNIRVCKILGSGVHS-SSVLHGMVFKKETEG---------DVTSVKDAKIAVYSCPFDGMITETKGTV 241 (512)
T ss_pred HHHhccCCcccHhHeeEeeccCCCccc-ceEEeeEEEecCcCC---------CCcccccCceEEEecccccccccccceE
Confidence 457776 566543 5999876 499999999999875 3556778888888876
Q ss_pred -CCCHHHHHHH-------HH----HHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHH
Q 016787 62 -ISNLTAVVRV-------LE----LALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAV 129 (382)
Q Consensus 62 -I~~~~~l~~~-------le----~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~ 129 (382)
|++++++.++ ++ +|.++|+||||++++|++.++++|.+++ |+|||+|+ +.+|+|||+
T Consensus 242 ~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~------I~av~~~~-----~~dle~ia~ 310 (512)
T 3iyg_Q 242 LIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYN------IMLVRLNS-----KWDLRRLCK 310 (512)
T ss_pred EeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eEEEEeCC-----HHHHHHHHH
Confidence 5567787765 44 8999999999999999999999998766 89999876 567999999
Q ss_pred HHCCeEeccCCCCccccCCcCCCceeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhh
Q 016787 130 LTGGDLITEELGMDLEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAK 206 (382)
Q Consensus 130 ~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~ 206 (382)
+|||+++++ ++++++++||+|++|++. ++++++|.+|+.
T Consensus 311 ~tGa~iis~-----l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~--------------------------------- 352 (512)
T 3iyg_Q 311 TVGATALPR-----LNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE--------------------------------- 352 (512)
T ss_pred HhCCEEecc-----cccCCHHHCCcccEEEEEEeCCeEEEEEEcccC---------------------------------
Confidence 999999999 999999999999999976 458899998752
Q ss_pred hcCCeEEEEecCCchhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhh
Q 016787 207 LSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKT 284 (382)
Q Consensus 207 l~g~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ 284 (382)
++++|||+|||+|+.+++|++|+++|||+++|+++++| +|||||++|++++..|++++.+ ++++|+++++|++||+.
T Consensus 353 -~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ 431 (512)
T 3iyg_Q 353 -DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEA 431 (512)
T ss_pred -CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999 9999999999999999999876 88999999999999999
Q ss_pred hHHHHHHHcCCCHHHHHHHHHhcC---CCceeEeCCCC--ccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhcc
Q 016787 285 PVHTIAANAGVEGAVVVGKLLEQD---NTDLGYDAAKG--EYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 359 (382)
Q Consensus 285 ip~~L~~NaG~d~~~vi~~l~~~~---~~~~Gid~~~~--~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~ 359 (382)
||++||+|||+|+.+++++|++.| ++++|||+.+| ++.||++.|||||+.||+++|++|+|+|++|||||++|++
T Consensus 432 ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 432 IPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMA 511 (512)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheec
Confidence 999999999999999999999876 57899999965 9999999999999999999999999999999999999975
Q ss_pred C
Q 016787 360 L 360 (382)
Q Consensus 360 ~ 360 (382)
+
T Consensus 512 k 512 (512)
T 3iyg_Q 512 K 512 (512)
T ss_pred C
Confidence 3
No 24
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=5.6e-63 Score=510.21 Aligned_cols=305 Identities=19% Similarity=0.298 Sum_probs=274.5
Q ss_pred cccCCCc---eEEEE--eCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccC--------------C
Q 016787 2 EKVGKEG---VITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK--------------I 62 (382)
Q Consensus 2 ~~~G~~g---~i~~~--~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~--------------I 62 (382)
++||++| +|.++ +|+++.|+ ++++|++|+++|.||+ +..++||+|++++++ |
T Consensus 182 ~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~--------p~~~~n~kIlll~~~le~~k~~~~~~~v~i 252 (527)
T 3p9d_B 182 LRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ--------PKRIENAKILIANTTLDTDKVKIFGTKFKV 252 (527)
T ss_dssp HTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC--------CSCCSSCEEEEECSCSSCCCCSSCCCBCCC
T ss_pred HHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC--------CeeeecceEEEeccccccccccccCceEEE
Confidence 5788888 77665 68998885 9999999999999985 445789999999886 3
Q ss_pred CCHHHH-----------HHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHH
Q 016787 63 SNLTAV-----------VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLT 131 (382)
Q Consensus 63 ~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~t 131 (382)
++++++ .+++++|.++|+||||++++|++.++++|..|+ |++|+++ ++.+|+|||++|
T Consensus 253 ~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~~~-----~~~dle~ia~~t 321 (527)
T 3p9d_B 253 DSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIEHA-----DFEGVERLALVT 321 (527)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCCCC-----HHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEecC-----CHHHHHHHHHHh
Confidence 455554 578899999999999999999999999999998 6888866 477899999999
Q ss_pred CCeEeccCCCCccccCCcCCCceeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhc
Q 016787 132 GGDLITEELGMDLEKVNLDMLGTCKKVT---ISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLS 208 (382)
Q Consensus 132 G~~ii~~~~~~~l~~l~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~ 208 (382)
||+++++ ++++++++||+|+.|+ ++++++++|.+|++
T Consensus 322 Ga~iv~~-----~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------------------------- 361 (527)
T 3p9d_B 322 GGEVVST-----FDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA----------------------------------- 361 (527)
T ss_dssp CCCCCST-----TSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC-----------------------------------
T ss_pred CCEEecc-----hhhCCHHHCCCCcEEEEEEecceEEEEEECCCC-----------------------------------
Confidence 9999999 8999999999999999 45789999999874
Q ss_pred CCeEEEEecCCchhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhH
Q 016787 209 GGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPV 286 (382)
Q Consensus 209 g~~~TI~lrG~t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip 286 (382)
+++|||+|||+|+.+++|++|+++||||++|+++++| +|||||++|++++..|++++.+ ++++|+++++|++||+.||
T Consensus 362 ~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip 441 (527)
T 3p9d_B 362 GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLP 441 (527)
T ss_dssp SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999 9999999999999999999876 8899999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHhcC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccCCcc
Q 016787 287 HTIAANAGVEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 363 (382)
Q Consensus 287 ~~L~~NaG~d~~~vi~~l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~ 363 (382)
++||+|||+|+.+++++|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..+|++
T Consensus 442 ~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 521 (527)
T 3p9d_B 442 TILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRARPRT 521 (527)
T ss_dssp HHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC---
T ss_pred HHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcc
Confidence 9999999999999999999876 4689999999999999999999999999999999999999999999999998877
Q ss_pred CCC
Q 016787 364 EKE 366 (382)
Q Consensus 364 ~~~ 366 (382)
+.+
T Consensus 522 ~~~ 524 (527)
T 3p9d_B 522 ANR 524 (527)
T ss_dssp ---
T ss_pred cCC
Confidence 554
No 25
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.7e-62 Score=509.86 Aligned_cols=301 Identities=18% Similarity=0.250 Sum_probs=258.8
Q ss_pred eEEE--EeCCccceeeEEEEeEEEeecccCcccccccccCceeec---CceEEEeccC-------------CCCHHHHHH
Q 016787 9 VITI--HDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELE---DPLILVHEKK-------------ISNLTAVVR 70 (382)
Q Consensus 9 ~i~~--~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~---~p~Ill~d~~-------------I~~~~~l~~ 70 (382)
.|.+ .+|++++|+ ++++|++|+++|. .|++.++ ||+|++++++ |++++++.+
T Consensus 206 ~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~ 275 (568)
T 3p9d_H 206 SIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLD 275 (568)
T ss_dssp GCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHH
T ss_pred eEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHH
Confidence 4544 569999987 9999999999874 2788888 9999999998 667877654
Q ss_pred -----------HHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccC
Q 016787 71 -----------VLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEE 139 (382)
Q Consensus 71 -----------~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~ 139 (382)
++++|.+.|+||||++++|++.++++|.+++ |+||++++ +++|+|||++|||+++++
T Consensus 276 ~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~g------I~av~~v~-----~~~leria~~tGa~ivs~- 343 (568)
T 3p9d_H 276 FSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYG------ILVLKVPS-----KFELRRLCRVCGATPLPR- 343 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHT------CEEECCCC-----HHHHHHHHHHHSCCCCSS-
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCC------eEEEecCC-----HHHHHHHHHHhCCEEEec-
Confidence 7889999999999999999999999999988 79999774 789999999999999999
Q ss_pred CCCccccCCcCCCceeeEEEEec---ceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEe
Q 016787 140 LGMDLEKVNLDMLGTCKKVTISK---DDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKI 216 (382)
Q Consensus 140 ~~~~l~~l~~~~lG~~~~v~i~~---~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~l 216 (382)
++++++++||+|+.|++.+ ++++||.+|+. +++++|||+|
T Consensus 344 ----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------------------------l~~~~~TIll 386 (568)
T 3p9d_H 344 ----LGAPTPEELGLVETVKTMEIGGDRVTVFKQEQG---------------------------------EISRTSTIIL 386 (568)
T ss_dssp ----SSCCCGGGCEECSCCCCCEETTEECBCCCCCSS---------------------------------SCCSSCEEEE
T ss_pred ----cccCCHHHCCcceEEEEEEecCceEEEEecCCC---------------------------------CCCCeEEEEE
Confidence 9999999999999998654 89999999862 2356899999
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHhh--cC-ccccchHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHhhhhHHHHHHH
Q 016787 217 GGASEAEVGEKKDRVTDALNATKAAVE--EG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAAN 292 (382)
Q Consensus 217 rG~t~~~l~E~~r~l~dal~~~~~a~~--~g-vvpGGGa~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~N 292 (382)
||+|+.+++|.||+++|||+++|++++ ++ +|||||++|++|+.+|++++.+ ++++|+++++|++||+.||++||+|
T Consensus 387 rG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~N 466 (568)
T 3p9d_H 387 RGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAET 466 (568)
T ss_dssp EESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 76 9999999999999999999877 8899999999999999999999999
Q ss_pred cCCCHHHHHHHHHhcCC-----------CceeEeCCCCc---cccccccCccccchhHHHHHHHHHHHHHHhhchhhhhc
Q 016787 293 AGVEGAVVVGKLLEQDN-----------TDLGYDAAKGE---YVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVV 358 (382)
Q Consensus 293 aG~d~~~vi~~l~~~~~-----------~~~Gid~~~~~---i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~ 358 (382)
||+|+.+++++|++.|. +++|||+.+|+ +.||++.|||||+.||+++|+.|+|+|++|||||++|.
T Consensus 467 aG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~ 546 (568)
T 3p9d_H 467 AGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIM 546 (568)
T ss_dssp HTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC--------
T ss_pred cCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 99999999999999873 47999999997 99999999999999999999999999999999999999
Q ss_pred cCCccCCCCC
Q 016787 359 ELPKEEKEAP 368 (382)
Q Consensus 359 ~~~~~~~~~~ 368 (382)
.+|.+.|++|
T Consensus 547 ~~~~~~~~~~ 556 (568)
T 3p9d_H 547 AKKAGGPRAP 556 (568)
T ss_dssp ----------
T ss_pred ccccCCCCCC
Confidence 9988877653
No 26
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=6e-61 Score=496.73 Aligned_cols=293 Identities=19% Similarity=0.310 Sum_probs=258.4
Q ss_pred EEEeCCccceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccCCC-------------CHHHH---------
Q 016787 11 TIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS-------------NLTAV--------- 68 (382)
Q Consensus 11 ~~~~G~~~~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I~-------------~~~~l--------- 68 (382)
.+.+|++..|+ ++++|++|+++|.||+ |+++++||+||+++++++ +++++
T Consensus 197 ~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~ 268 (546)
T 3p9d_F 197 MQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERK 268 (546)
T ss_dssp ECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHH
T ss_pred EEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHH
Confidence 34568888876 8999999999999985 788999999999998753 22222
Q ss_pred --HHHHHHHHHc---------CCC-EEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEe
Q 016787 69 --VRVLELALKR---------QRP-LLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLI 136 (382)
Q Consensus 69 --~~~le~i~~~---------~~~-lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii 136 (382)
...+++|... ++| |||++++|++.|+++|.+|+ |++|++ +++++|+|||++|||+++
T Consensus 269 ~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g------I~~vr~-----v~~~~leria~~tGa~ii 337 (546)
T 3p9d_F 269 FVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN------ILALRR-----AKRRNMERLQLVTGGEAQ 337 (546)
T ss_dssp HHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT------CEEECC-----CCHHHHHHHHHTTTBCCC
T ss_pred HHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC------CeeEec-----CCHHHHHHHHHHhCCEEe
Confidence 2345666553 444 66778899999999999998 588884 468899999999999999
Q ss_pred ccCCCCccccCCcCCCceeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEE
Q 016787 137 TEELGMDLEKVNLDMLGTCKKVT---ISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAV 213 (382)
Q Consensus 137 ~~~~~~~l~~l~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~T 213 (382)
++ ++++++++||+|+.|+ +++++|+||++|+++ ..||
T Consensus 338 ~~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-----------------------------------~~~t 377 (546)
T 3p9d_F 338 NS-----VEDLSPQILGFSGLVYQETIGEEKFTYVTENTDP-----------------------------------KSCT 377 (546)
T ss_dssp CC-----CSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC-----------------------------------SCEE
T ss_pred cc-----hhhCCHhHCCcccEEEEEEecCceEEEEecCCCC-----------------------------------ceEE
Confidence 99 9999999999999995 567899999999864 4799
Q ss_pred EEecCCchhHHHHHHHHHHHHHHHHHHHhhcC-ccccchHHHHHHHHHHHH---hccC-ChhhHHHHHHHHHHhhhhHHH
Q 016787 214 LKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEK---LSTA-NFDQKIGVQIIQNALKTPVHT 288 (382)
Q Consensus 214 I~lrG~t~~~l~E~~r~l~dal~~~~~a~~~g-vvpGGGa~e~~ls~~L~~---~~~~-~~~~~~~~~~~a~AL~~ip~~ 288 (382)
|+|||+|+.+++|++|+++||||++|+++++| +|||||++|+++|..|++ |+.+ ++++|+++++|++||+.||++
T Consensus 378 I~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~ 457 (546)
T 3p9d_F 378 ILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKT 457 (546)
T ss_dssp EECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999999999998 4666 889999999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHhcC--------CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhccC
Q 016787 289 IAANAGVEGAVVVGKLLEQD--------NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVEL 360 (382)
Q Consensus 289 L~~NaG~d~~~vi~~l~~~~--------~~~~Gid~~~~~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~ 360 (382)
||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.++
T Consensus 458 La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 537 (546)
T 3p9d_F 458 LVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAG 537 (546)
T ss_dssp HHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEEC
T ss_pred HHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999764 3579999999999999999999999999999999999999999999999875
Q ss_pred Cc
Q 016787 361 PK 362 (382)
Q Consensus 361 ~~ 362 (382)
+.
T Consensus 538 ~~ 539 (546)
T 3p9d_F 538 RS 539 (546)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.8e-46 Score=326.34 Aligned_cols=193 Identities=51% Similarity=0.854 Sum_probs=188.9
Q ss_pred eEEEEeEEEeecccCcccccccccCceeecCceEEEeccCCCCHHHHHHHHHHHHHcCCCEEEEecCCcHHHHHHHHHcc
Q 016787 22 LEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNK 101 (382)
Q Consensus 22 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I~~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~ 101 (382)
+++++||.|++||+||||+|++++|..+++||+||++|.+|+++++++|+||++.+.++||+|++++++.+||+.|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccccCCcCCCceeeEEEEecceEEEEcCCCChhhHHHHH
Q 016787 102 LRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERC 181 (382)
Q Consensus 102 ~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~ 181 (382)
++|.++|||||+|+||+.|+..|+|||.+|||++++.+.++++++++.++||+|+++.+++++|+++.|.+++++|+.||
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEE
Q 016787 182 EQIRSAIENSTSDYDKEKLQERLAKLSGGVAVL 214 (382)
Q Consensus 182 ~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI 214 (382)
++|+.+++.+.|+|+|++|+||+++|+|+++.|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999998754
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=2.5e-44 Score=317.77 Aligned_cols=188 Identities=56% Similarity=0.907 Sum_probs=184.6
Q ss_pred EEeEEEeecccCcccccccccCceeecCceEEEeccCCCCHHHHHHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccC
Q 016787 25 VEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRA 104 (382)
Q Consensus 25 ~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I~~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~ 104 (382)
.+|+.|++||+||||+|++++|..+++||+||++|.+|+++++++|+||++.+.++||||++++|+.+||+.|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccccCCcCCCceeeEEEEecceEEEEcCCCChhhHHHHHHHH
Q 016787 105 GIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQI 184 (382)
Q Consensus 105 ~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~~~l 184 (382)
.++|||||+|+||+.|+..|+|||++|||++++.+.++++++++.++||+|++|.+++++|+++.|.+++++|+.||++|
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCChHHHHHHHHHHhhhcCCeE
Q 016787 185 RSAIENSTSDYDKEKLQERLAKLSGGVA 212 (382)
Q Consensus 185 ~~~~~~~~s~~~~~~l~~rl~~l~g~~~ 212 (382)
+.+++.+.|+|+||+|+|||++|+|+++
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVA 199 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVK 199 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999999876
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=7.1e-35 Score=245.74 Aligned_cols=144 Identities=52% Similarity=0.898 Sum_probs=141.7
Q ss_pred eEEEeecccCcccccccccCceeecCceEEEeccCCCCHHHHHHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCc
Q 016787 27 GMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGI 106 (382)
Q Consensus 27 G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I~~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~ 106 (382)
||.|++||+||||+|++++|..+++||+||++|.+|+++++++|+||++.+.++||+|++++++.+||+.|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccccCCcCCCceeeEEEEecceEEEEcC
Q 016787 107 KVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDG 170 (382)
Q Consensus 107 ~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i~~~~~~~~~~ 170 (382)
++||||+|+||+.|+..|+|||.+||+++++.+.++++++++.++||+|+++.+++++|+++.|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.92 E-value=4.5e-25 Score=196.69 Aligned_cols=145 Identities=17% Similarity=0.290 Sum_probs=122.4
Q ss_pred ceeeEEEEeEEEeecccCcccccccccCceeecCceEEEeccCCC-------------CHHH-----------HHHHHHH
Q 016787 19 YNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS-------------NLTA-----------VVRVLEL 74 (382)
Q Consensus 19 ~d~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I~-------------~~~~-----------l~~~le~ 74 (382)
+|| ++++|++|++++.++. ||+.++||||++++++++ ++++ +..++++
T Consensus 2 ~dS-~lv~Gvvl~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~k 73 (178)
T 1gml_A 2 EDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCED 73 (178)
T ss_dssp -CC-SEEEEEEESCCCSSTT-------SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHH
T ss_pred CCc-EEEEEEEEeccccCCC-------CCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHH
Confidence 455 8999999999998874 788999999999999854 2222 3467889
Q ss_pred HHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccccCCcCCCce
Q 016787 75 ALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGT 154 (382)
Q Consensus 75 i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~~l~~~~lG~ 154 (382)
|+++|+||||++++|+|.|++||.+++ |+||+ ++++++|+|||++|||+++++ +++++++.||+
T Consensus 74 I~~~g~nVVl~~k~I~d~a~~~l~k~g------I~~vr-----~v~~~dleria~atGa~iv~~-----~~~l~~~~LG~ 137 (178)
T 1gml_A 74 IIQLKPDVVITEKGISDLAQHYLMRAN------VTAIR-----RVRKTDNNRIARACGARIVSR-----PEELREDDVGT 137 (178)
T ss_dssp HHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----CCCHHHHHHHHHHHCCCEESC-----GGGCCGGGSBC
T ss_pred HhhcCCcEEEECCcccHHHHHHHHHCC------CEEEe-----cCCHHHHHHHHHHhCCeEeCC-----hhhCChhhhCC
Confidence 999999999999999999999999998 68888 556999999999999999999 99999999999
Q ss_pred -eeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHhhhcCCeEEEEecCCchh
Q 016787 155 -CKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEA 222 (382)
Q Consensus 155 -~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~s~~~~~~l~~rl~~l~g~~~TI~lrG~t~~ 222 (382)
|+.|++. +++++||++|+++ ..|||+|||+|..
T Consensus 138 ~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 138 GAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp CEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred cccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 9999954 6899999998754 4799999999853
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.85 E-value=3.1e-21 Score=168.73 Aligned_cols=126 Identities=17% Similarity=0.319 Sum_probs=111.2
Q ss_pred EEeEEEeecccCcccccccccCceeecCceEEEeccCCC-------------CHHH-----------HHHHHHHHHHcCC
Q 016787 25 VEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS-------------NLTA-----------VVRVLELALKRQR 80 (382)
Q Consensus 25 ~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~I~-------------~~~~-----------l~~~le~i~~~~~ 80 (382)
++|++|++++.++. ||+.++||||++++++++ ++++ +..++++|+++|+
T Consensus 1 i~Gvv~~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSK-------MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTT-------SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCC-------CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 47999999999874 788999999999999854 3433 3467889999999
Q ss_pred CEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEeccCCCCccccCCcCCCceeeEEEE
Q 016787 81 PLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTI 160 (382)
Q Consensus 81 ~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~i 160 (382)
||||++++|+|.|+++|.+++ |+||+ ++++++|+|||++|||+++++ +++++++.||+|+.|++
T Consensus 74 nVVl~~k~I~d~a~~~l~k~g------I~~v~-----~v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCC------CEEEc-----cCCHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 999999999999999999998 68888 556999999999999999999 99999999999999996
Q ss_pred e---cceEEEEcCCCC
Q 016787 161 S---KDDTVILDGAGD 173 (382)
Q Consensus 161 ~---~~~~~~~~~~~~ 173 (382)
. ++++++|++|++
T Consensus 138 ~~ig~~~~~~~~g~~~ 153 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKN 153 (159)
T ss_dssp EEETTEEEEEEESCC-
T ss_pred EEECCeEEEEEECCCC
Confidence 4 589999999986
No 32
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=76.89 E-value=0.5 Score=48.36 Aligned_cols=28 Identities=7% Similarity=-0.046 Sum_probs=14.5
Q ss_pred cccccCccccchhH----HHHHHHHHHHHHHh
Q 016787 323 DMVKSGIIDPLKVI----RTALVDAASVSSLM 350 (382)
Q Consensus 323 d~~~~gI~Dp~~vk----~~~l~~A~e~a~~i 350 (382)
|...-.+.|.+..- ...-+.|+..|..+
T Consensus 474 d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~ 505 (543)
T 3ruv_A 474 NVFTGAVEDMCENGVVEPLRVKTQAIQSAAES 505 (543)
T ss_dssp CTTTCSEEETTTTTCEEEHHHHHHHHHHHHHH
T ss_pred eCCCCccccHHHcCCEecHHHHHHHHHHHHHH
Confidence 33334455655432 34556666666644
No 33
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=35.53 E-value=32 Score=30.14 Aligned_cols=42 Identities=17% Similarity=0.186 Sum_probs=30.7
Q ss_pred eecCceEEEeccCCC-----CHHHHHHHHHHHHHcCCCEEEEecCCc
Q 016787 49 ELEDPLILVHEKKIS-----NLTAVVRVLELALKRQRPLLIVAEDVE 90 (382)
Q Consensus 49 ~l~~p~Ill~d~~I~-----~~~~l~~~le~i~~~~~~lvI~~~~i~ 90 (382)
-+.+|+++++|.|.. +.+++.+++..+.+.+.-+|++..+.+
T Consensus 148 L~~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~ 194 (214)
T 1sgw_A 148 LLVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGIVIISSREEL 194 (214)
T ss_dssp TTSCCSEEEEESTTTTSCTTTHHHHHHHHHHHHHHHSEEEEEESSCC
T ss_pred HHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 357889999999843 456677888777666777888877754
No 34
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=33.79 E-value=23 Score=31.88 Aligned_cols=42 Identities=12% Similarity=0.272 Sum_probs=30.2
Q ss_pred ecCceEEEeccCCCC-----HHHHHHHHHHHHHcCCCEEEEecCCcH
Q 016787 50 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDVES 91 (382)
Q Consensus 50 l~~p~Ill~d~~I~~-----~~~l~~~le~i~~~~~~lvI~~~~i~~ 91 (382)
+.+|+++++|.|... .+++..++..+.+.|.-+|++..+.+.
T Consensus 169 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtHd~~~ 215 (257)
T 1g6h_A 169 MTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDI 215 (257)
T ss_dssp HTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred HcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHH
Confidence 478889999998553 345677777776667778888887654
No 35
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=31.97 E-value=42 Score=29.61 Aligned_cols=58 Identities=9% Similarity=0.016 Sum_probs=37.7
Q ss_pred HHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCe
Q 016787 72 LELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGD 134 (382)
Q Consensus 72 le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ 134 (382)
+|+|...+++|||.....++.....|...++ +++.+....+.++ .+.++.|+.++|-.
T Consensus 53 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~gi----pvv~~~~~~~~~~-~~~i~~lg~~~g~~ 110 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVSTIKDEMQPFYKQLNM----KGYFYDFDSLKGM-QKSITQLGDQFNRK 110 (260)
T ss_dssp HHHHHHTCCSEEEEEGGGHHHHHHHHHHHTS----CCEEECCSSHHHH-HHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEecCccCHHHHHHHHHcCC----cEEEecCCCHHHH-HHHHHHHHHHhCCh
Confidence 5888889999999877665666677755553 3555543222222 46677788877753
No 36
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=31.62 E-value=34 Score=30.38 Aligned_cols=40 Identities=15% Similarity=0.352 Sum_probs=25.5
Q ss_pred ecCceEEEeccCCCC-----HHHHHHHHHHHHHcCCCEEEEecCC
Q 016787 50 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDV 89 (382)
Q Consensus 50 l~~p~Ill~d~~I~~-----~~~l~~~le~i~~~~~~lvI~~~~i 89 (382)
+.+|+++++|.|... .+++..++..+.+.|.-+|++..+.
T Consensus 155 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~g~tvi~vtHd~ 199 (240)
T 1ji0_A 155 MSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNA 199 (240)
T ss_dssp TTCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCH
Confidence 457778888877543 2345666666655566777777664
No 37
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=30.32 E-value=33 Score=30.95 Aligned_cols=40 Identities=15% Similarity=0.422 Sum_probs=23.7
Q ss_pred ecCceEEEeccCCCC-----HHHHHHHHHHHHHcCCCEEEEecCC
Q 016787 50 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDV 89 (382)
Q Consensus 50 l~~p~Ill~d~~I~~-----~~~l~~~le~i~~~~~~lvI~~~~i 89 (382)
+.+|+++++|.|... ..++..++..+.+.|..+|++..++
T Consensus 169 ~~~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~ 213 (262)
T 1b0u_A 169 AMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEM 213 (262)
T ss_dssp HTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 356777777777442 2345556665555566666666664
No 38
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=29.94 E-value=89 Score=28.61 Aligned_cols=36 Identities=3% Similarity=0.134 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcHHHHHHHHH
Q 016787 64 NLTAVVRVLELALKRQRPLLIVAEDVESEALATLIL 99 (382)
Q Consensus 64 ~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~ 99 (382)
+++++..+++.+++.++++|++...+++...+.++.
T Consensus 222 s~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~ 257 (291)
T 1pq4_A 222 SAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAA 257 (291)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHH
Confidence 688999999999999999999999999988888854
No 39
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=29.72 E-value=1.5e+02 Score=24.99 Aligned_cols=64 Identities=9% Similarity=0.054 Sum_probs=37.3
Q ss_pred cCceeecC-ceEEEeccCCCCHHHHHHHHHHHHHcCCCEEEEecCC-cHHHHHHHHHccccCCceEEEEe
Q 016787 45 NQKCELED-PLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDV-ESEALATLILNKLRAGIKVCAIK 112 (382)
Q Consensus 45 ~~~~~l~~-p~Ill~d~~I~~~~~l~~~le~i~~~~~~lvI~~~~i-~~~al~~L~~n~~~~~~~i~av~ 112 (382)
+.+..+.. .+|+++.--=.+...+..+++.+.+.++++||+.+|+ ++.++..|..-+ .++.+|.
T Consensus 17 ~~~~~~~g~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~~~~~~l~~l~----~~~~~V~ 82 (190)
T 1s3l_A 17 TENLYFQGHMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSLFVIKEFENLN----ANIIATY 82 (190)
T ss_dssp ---------CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCSTHHHHHGGGCS----SEEEEEC
T ss_pred ccChhhcCCeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCHHHHHHHHhcC----CCEEEEe
Confidence 34666776 6776543323556677778888777789999999996 556666664211 2466665
No 40
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=27.32 E-value=32 Score=30.16 Aligned_cols=41 Identities=15% Similarity=0.329 Sum_probs=29.6
Q ss_pred ecCceEEEeccCCCC-----HHHHHHHHHHHHHcCCCEEEEecCCc
Q 016787 50 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDVE 90 (382)
Q Consensus 50 l~~p~Ill~d~~I~~-----~~~l~~~le~i~~~~~~lvI~~~~i~ 90 (382)
+.+|+++++|.|... .+++.+++..+.+.|.-+|++..+.+
T Consensus 156 ~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~~ 201 (224)
T 2pcj_A 156 ANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHERE 201 (224)
T ss_dssp TTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred HcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 478889999998653 34566777777656777888887743
No 41
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=26.59 E-value=35 Score=30.78 Aligned_cols=40 Identities=15% Similarity=0.329 Sum_probs=25.3
Q ss_pred ecCceEEEeccCCCC-----HHHHHHHHHHHHHcCCCEEEEecCC
Q 016787 50 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDV 89 (382)
Q Consensus 50 l~~p~Ill~d~~I~~-----~~~l~~~le~i~~~~~~lvI~~~~i 89 (382)
+.+|+++++|.|... ..++.+++..+.+.|.-+|++..+.
T Consensus 162 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~ 206 (256)
T 1vpl_A 162 MVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNM 206 (256)
T ss_dssp TTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred HcCCCEEEEeCCccccCHHHHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 467778888887543 3345666666655566666676664
No 42
>2ln3_A De novo designed protein OR135; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=26.14 E-value=1.7e+02 Score=20.54 Aligned_cols=52 Identities=15% Similarity=0.250 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCeEecc
Q 016787 64 NLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITE 138 (382)
Q Consensus 64 ~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ii~~ 138 (382)
+-++++++.-+....|.++-+--.+-+|.-+..| ..+|+++|+-||.++...
T Consensus 11 nkeelleialkfisqgldlevefdstddkeieef-----------------------erdmedlakktgvqiqkq 62 (83)
T 2ln3_A 11 NKEELLEIALKFISQGLDLEVEFDSTDDKEIEEF-----------------------ERDMEDLAKKTGVQIQKQ 62 (83)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEECCCCHHHHHHH-----------------------HHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHHHhcCCceEEEecCCChHHHHHH-----------------------HhHHHHHHHhhchhHHHH
Confidence 4567777766667788888666666677666655 347899999999988765
No 43
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=26.06 E-value=39 Score=30.65 Aligned_cols=40 Identities=15% Similarity=0.353 Sum_probs=25.2
Q ss_pred ecCceEEEeccCCCC-----HHHHHHHHHHHHHcCCCEEEEecCC
Q 016787 50 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDV 89 (382)
Q Consensus 50 l~~p~Ill~d~~I~~-----~~~l~~~le~i~~~~~~lvI~~~~i 89 (382)
+.+|+++++|.|... ..++.+++..+.+.|..+|++..++
T Consensus 175 ~~~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~ 219 (263)
T 2olj_A 175 AMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEM 219 (263)
T ss_dssp TTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred HCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 467778888877543 2345666666655566666776664
No 44
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=25.81 E-value=1.3e+02 Score=26.15 Aligned_cols=58 Identities=16% Similarity=0.134 Sum_probs=39.8
Q ss_pred HHHHHHcCCCEEEEecCCc-HHHHHHHHHccccCCceEEEEecC-CCCcchhhhHHHHHHHHCCe
Q 016787 72 LELALKRQRPLLIVAEDVE-SEALATLILNKLRAGIKVCAIKAP-GFGENRKANMQDLAVLTGGD 134 (382)
Q Consensus 72 le~i~~~~~~lvI~~~~i~-~~al~~L~~n~~~~~~~i~av~~~-~~~~~~~~~le~la~~tG~~ 134 (382)
+|+|...+++|||...... ......|...++ +++.+..+ .+.+ -.+.++.|+.++|..
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gi----pvv~~~~~~~~~~-~~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSGV----NVVTVPGQTTPES-VAMKINAVATALHQT 111 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTC----EEEEECCCCSHHH-HHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcCC----cEEEeCCCCCHHH-HHHHHHHHHHHhCCH
Confidence 6889999999999877653 466677755543 46666532 2222 256788999999965
No 45
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=25.28 E-value=34 Score=30.34 Aligned_cols=41 Identities=12% Similarity=0.323 Sum_probs=30.0
Q ss_pred ecCceEEEeccCCCC-----HHHHHHHHHHHHHc-CCCEEEEecCCc
Q 016787 50 LEDPLILVHEKKISN-----LTAVVRVLELALKR-QRPLLIVAEDVE 90 (382)
Q Consensus 50 l~~p~Ill~d~~I~~-----~~~l~~~le~i~~~-~~~lvI~~~~i~ 90 (382)
+.+|+++++|.|... ..++..++..+.+. |..+|++..+++
T Consensus 161 ~~~p~llllDEPts~LD~~~~~~i~~~l~~l~~~~g~tvi~vtHd~~ 207 (235)
T 3tif_A 161 ANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDIN 207 (235)
T ss_dssp TTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEECSCHH
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 468889999998553 34567777776544 788888888864
No 46
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=24.97 E-value=44 Score=30.14 Aligned_cols=42 Identities=19% Similarity=0.453 Sum_probs=27.7
Q ss_pred ecCceEEEeccCCCC-----HHHHHHHHHHHHHcCCCEEEEecCCcH
Q 016787 50 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDVES 91 (382)
Q Consensus 50 l~~p~Ill~d~~I~~-----~~~l~~~le~i~~~~~~lvI~~~~i~~ 91 (382)
+.+|+++++|.|... .+++.+++..+.+.|.-+|++..+.+.
T Consensus 154 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tii~vtHd~~~ 200 (266)
T 2yz2_A 154 VHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGKTVILISHDIET 200 (266)
T ss_dssp TTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCTT
T ss_pred HcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 467888888888543 334666666665556677777777543
No 47
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=24.33 E-value=41 Score=30.21 Aligned_cols=42 Identities=7% Similarity=0.075 Sum_probs=30.1
Q ss_pred eecCceEEEeccCCCC-----HHHHHHHHHHHHHc-CCCEEEEecCCc
Q 016787 49 ELEDPLILVHEKKISN-----LTAVVRVLELALKR-QRPLLIVAEDVE 90 (382)
Q Consensus 49 ~l~~p~Ill~d~~I~~-----~~~l~~~le~i~~~-~~~lvI~~~~i~ 90 (382)
-+.+|+++++|.|... ..++.+++..+.+. |.-+|++..+.+
T Consensus 143 L~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~ 190 (253)
T 2nq2_C 143 IASECKLILLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQPN 190 (253)
T ss_dssp HHTTCSEEEESSSSTTSCHHHHHHHHHHHHHHHHTSCCEEEEEESCHH
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH
Confidence 3478999999998653 34567777777655 777888888753
No 48
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=24.27 E-value=47 Score=30.32 Aligned_cols=42 Identities=12% Similarity=0.359 Sum_probs=29.9
Q ss_pred ecCceEEEeccCCCC-----HHHHHHHHHHHH-HcCCCEEEEecCCcH
Q 016787 50 LEDPLILVHEKKISN-----LTAVVRVLELAL-KRQRPLLIVAEDVES 91 (382)
Q Consensus 50 l~~p~Ill~d~~I~~-----~~~l~~~le~i~-~~~~~lvI~~~~i~~ 91 (382)
..+|+++++|.|... ..++.+++..+. +.|.-+|++..+++.
T Consensus 159 ~~~P~lLlLDEPts~LD~~~~~~i~~~l~~l~~~~g~tvi~vtHdl~~ 206 (275)
T 3gfo_A 159 VMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDI 206 (275)
T ss_dssp TTCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHHHCCEEEEEESCCSS
T ss_pred HcCCCEEEEECccccCCHHHHHHHHHHHHHHHhhCCCEEEEEecCHHH
Confidence 468889999998553 345667777765 457788888887644
No 49
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=24.17 E-value=1.4e+02 Score=26.04 Aligned_cols=57 Identities=21% Similarity=0.117 Sum_probs=37.2
Q ss_pred HHHHHHcCCCEEEEecC-CcHHHHHHHHHccccCCceEEEEecC--CCCcchhhhHHHHHHHHCC
Q 016787 72 LELALKRQRPLLIVAED-VESEALATLILNKLRAGIKVCAIKAP--GFGENRKANMQDLAVLTGG 133 (382)
Q Consensus 72 le~i~~~~~~lvI~~~~-i~~~al~~L~~n~~~~~~~i~av~~~--~~~~~~~~~le~la~~tG~ 133 (382)
+|+|...+++|||.... .+......|...++ +++.+..+ .+.+ -.+.++.|+.++|-
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gi----pvv~~~~~~~~~~~-~~~~i~~lg~~~g~ 111 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQDAGPQIVLDQLRAQKV----NVVTLPRVPATLEQ-MYANIRQLAKTLQV 111 (256)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTC----EEEEECCCSCCHHH-HHHHHHHHHHHTTC
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHcCC----cEEEecCCCCCHHH-HHHHHHHHHHHhCC
Confidence 68888999999998764 45677777765553 45666432 1222 24567777777775
No 50
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=23.05 E-value=48 Score=30.26 Aligned_cols=41 Identities=15% Similarity=0.313 Sum_probs=30.3
Q ss_pred ecCceEEEeccCCCC-----HHHHHHHHHHHHHcCCCE--EEEecCCc
Q 016787 50 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPL--LIVAEDVE 90 (382)
Q Consensus 50 l~~p~Ill~d~~I~~-----~~~l~~~le~i~~~~~~l--vI~~~~i~ 90 (382)
+.+|+++++|.|... .+++..++..+.+.|.-+ |++..+.+
T Consensus 177 ~~~p~lLlLDEPts~LD~~~~~~l~~~l~~l~~~g~tv~~iivtHd~~ 224 (279)
T 2ihy_A 177 MGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIE 224 (279)
T ss_dssp HTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHHCTTCEEEEEESCGG
T ss_pred hCCCCEEEEeCCccccCHHHHHHHHHHHHHHHHCCCEEEEEEEecCHH
Confidence 478999999998553 345677777776558788 88888764
No 51
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=21.86 E-value=31 Score=30.85 Aligned_cols=39 Identities=18% Similarity=0.138 Sum_probs=18.3
Q ss_pred cCceEEEeccCCCC-----HHHHHHHHHHHHHcCCCEEEEecCC
Q 016787 51 EDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDV 89 (382)
Q Consensus 51 ~~p~Ill~d~~I~~-----~~~l~~~le~i~~~~~~lvI~~~~i 89 (382)
.+|+++++|.|... .+++.+++..+.+.|.-+|++..+.
T Consensus 160 ~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtHd~ 203 (250)
T 2d2e_A 160 LEPTYAVLDETDSGLDIDALKVVARGVNAMRGPNFGALVITHYQ 203 (250)
T ss_dssp HCCSEEEEECGGGTTCHHHHHHHHHHHHHHCSTTCEEEEECSSS
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhcCCEEEEEecCH
Confidence 45666666665332 2234444444433344455555553
No 52
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=21.78 E-value=66 Score=28.07 Aligned_cols=37 Identities=19% Similarity=0.143 Sum_probs=25.9
Q ss_pred HHHHHHcCCCEEEEec-CCcHHHHHHHHHccccCCceEEEEe
Q 016787 72 LELALKRQRPLLIVAE-DVESEALATLILNKLRAGIKVCAIK 112 (382)
Q Consensus 72 le~i~~~~~~lvI~~~-~i~~~al~~L~~n~~~~~~~i~av~ 112 (382)
+|+|...+++|||... ..++.....|...++ +++.+.
T Consensus 50 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gi----pvv~~~ 87 (245)
T 1n2z_A 50 LERIVALKPDLVIAWRGGNAERQVDQLASLGI----KVMWVD 87 (245)
T ss_dssp HHHHHHTCCSEEEECTTTSCHHHHHHHHHHTC----CEEECC
T ss_pred HHHHhccCCCEEEEeCCCCcHHHHHHHHHCCC----cEEEeC
Confidence 6888899999998853 466777777765553 355543
No 53
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=21.16 E-value=1.3e+02 Score=21.85 Aligned_cols=54 Identities=17% Similarity=0.244 Sum_probs=31.3
Q ss_pred HHHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCe
Q 016787 71 VLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGD 134 (382)
Q Consensus 71 ~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ 134 (382)
.++.+.+....+||++.|.++.....|..--....++++-+. .-++|..++|-.
T Consensus 19 v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~----------sk~eLG~a~Gk~ 72 (82)
T 3v7e_A 19 TVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVE----------SMKKLGKACGIE 72 (82)
T ss_dssp HHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES----------CHHHHHHHHTCS
T ss_pred HHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC----------CHHHHHHHhCCC
Confidence 345555555899999999999766555321111112343331 236788888764
No 54
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=20.82 E-value=1.6e+02 Score=25.83 Aligned_cols=66 Identities=14% Similarity=0.256 Sum_probs=48.1
Q ss_pred CceeecCceEEEeccCCCCHHHHHHHHHHHHHcCCC---EEEEecCCcHHHHHHHHHccccCCceEEEEe
Q 016787 46 QKCELEDPLILVHEKKISNLTAVVRVLELALKRQRP---LLIVAEDVESEALATLILNKLRAGIKVCAIK 112 (382)
Q Consensus 46 ~~~~l~~p~Ill~d~~I~~~~~l~~~le~i~~~~~~---lvI~~~~i~~~al~~L~~n~~~~~~~i~av~ 112 (382)
.+ .+++-.|+++|--|.+-..+...++.+++.|++ +.++.--.+++.++.|....-.-.+++.+|.
T Consensus 124 lP-~i~~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~~~~~vaa~egl~~l~~~~P~v~i~ta~iD 192 (217)
T 3dmp_A 124 LP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLALVAAPEGVQVFQDAHPDVKLYVASLD 192 (217)
T ss_dssp CC-CCTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEECSEECHHHHHHHHHHCTTCEEEESEEC
T ss_pred CC-CCCCCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEEEEEEEeCHHHHHHHHHHCCCCEEEEEEec
Confidence 45 566778889888888888899999999999974 5566655678899988766533234455553
No 55
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=20.79 E-value=1.2e+02 Score=28.00 Aligned_cols=57 Identities=9% Similarity=0.046 Sum_probs=38.6
Q ss_pred HHHHHHcCCCEEEEecCCcHHHHHHHHHccccCCceEEEEecCCCCcchhhhHHHHHHHHCCe
Q 016787 72 LELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGD 134 (382)
Q Consensus 72 le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~~~~~~~~le~la~~tG~~ 134 (382)
+|+|...+++|||.... .......|...++ +++.+....+.++ .+.++.|+.++|-.
T Consensus 109 ~E~i~al~PDLIi~~~~-~~~~~~~L~~~gi----pvv~~~~~~~~~~-~~~i~~lg~~lg~e 165 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK-LKKTADTLESLGI----KAVVVNPEDQSLL-EECITLVGKITNNA 165 (335)
T ss_dssp HHHHHHTCCSEEEEEGG-GHHHHHHHHHTTC----CEEEECCCSHHHH-HHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEEeCc-chhHHHHHHHcCC----CEEEEcCCCHHHH-HHHHHHHHHHcCCH
Confidence 68899999999988765 4566666755543 4666653332232 56788888888864
Done!