Query 016788
Match_columns 382
No_of_seqs 287 out of 2231
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 02:49:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016788.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016788hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4720 Ethanolamine kinase [L 100.0 1.1E-70 2.4E-75 489.8 23.7 345 18-369 42-389 (391)
2 PLN02421 phosphotransferase, a 100.0 6.5E-65 1.4E-69 485.3 35.7 329 48-376 1-329 (330)
3 PLN02236 choline kinase 100.0 6.7E-59 1.5E-63 445.7 35.3 325 36-366 10-343 (344)
4 PTZ00296 choline kinase; Provi 100.0 7.2E-59 1.6E-63 455.8 34.9 316 43-366 87-433 (442)
5 KOG2686 Choline kinase [Cell w 100.0 4.5E-55 9.8E-60 404.3 24.5 329 39-368 17-363 (366)
6 PTZ00384 choline kinase; Provi 100.0 1.2E-53 2.6E-58 412.0 34.8 318 39-364 28-375 (383)
7 cd05156 ChoK_euk Choline Kinas 100.0 2.8E-44 6.1E-49 340.1 25.7 273 64-336 1-302 (302)
8 cd05157 ETNK_euk Ethanolamine 100.0 1.7E-37 3.6E-42 283.2 23.4 228 64-294 1-235 (235)
9 TIGR02721 ycfN_thiK thiamine k 100.0 6.3E-36 1.4E-40 276.4 24.9 249 67-353 2-251 (256)
10 PF01633 Choline_kinase: Choli 100.0 1.4E-36 3.1E-41 272.7 12.5 199 90-288 3-210 (211)
11 cd05151 ChoK Choline Kinase (C 99.9 9.1E-26 2E-30 194.9 19.6 165 65-301 2-168 (170)
12 cd05153 HomoserineK_II Homoser 99.9 2.9E-25 6.2E-30 209.4 22.0 248 63-339 16-274 (296)
13 TIGR02172 Fb_sc_TIGR02172 Fibr 99.9 4.9E-25 1.1E-29 199.3 17.5 196 67-299 7-212 (226)
14 cd05154 ACAD10_11_like Acyl-Co 99.9 3.2E-23 7E-28 186.5 19.0 194 65-274 2-220 (223)
15 COG0510 ycfN Thiamine kinase a 99.9 1.9E-23 4.1E-28 193.0 17.4 243 65-362 10-261 (269)
16 PRK05231 homoserine kinase; Pr 99.9 6.4E-22 1.4E-26 188.7 24.2 226 63-315 24-266 (319)
17 cd05150 APH Aminoglycoside 3'- 99.9 2.4E-22 5.2E-27 184.3 20.2 216 66-300 3-227 (244)
18 TIGR00938 thrB_alt homoserine 99.9 8E-22 1.7E-26 187.0 22.5 233 62-315 23-266 (307)
19 cd05155 APH_ChoK_like_1 Unchar 99.9 1.5E-21 3.2E-26 178.1 19.3 203 66-298 2-221 (235)
20 PF01636 APH: Phosphotransfera 99.9 2.8E-22 6E-27 181.6 11.3 216 65-298 1-228 (239)
21 PRK10271 thiK thiamine kinase; 99.9 1.2E-20 2.7E-25 163.1 17.0 176 135-350 2-177 (188)
22 PLN02876 acyl-CoA dehydrogenas 99.9 1.3E-19 2.7E-24 192.7 27.0 247 42-300 20-308 (822)
23 COG2334 Putative homoserine ki 99.9 8.1E-20 1.8E-24 172.7 22.6 254 64-347 29-303 (331)
24 COG3173 Predicted aminoglycosi 99.8 2.2E-19 4.7E-24 168.0 20.9 211 43-271 11-239 (321)
25 PRK11768 serine/threonine prot 99.8 3.5E-18 7.5E-23 163.1 29.3 256 43-336 14-285 (325)
26 cd05152 MPH2' Macrolide 2'-Pho 99.8 3.6E-19 7.9E-24 165.7 21.5 206 65-301 15-246 (276)
27 TIGR02906 spore_CotS spore coa 99.8 2.2E-18 4.8E-23 163.7 26.5 243 66-336 3-281 (313)
28 PRK10593 hypothetical protein; 99.8 1.4E-18 2.9E-23 163.8 21.7 238 63-328 16-275 (297)
29 PRK09550 mtnK methylthioribose 99.8 5.8E-18 1.2E-22 163.8 25.5 223 42-274 9-266 (401)
30 TIGR02904 spore_ysxE spore coa 99.8 6.8E-18 1.5E-22 160.2 20.5 246 65-337 11-291 (309)
31 PRK12396 5-methylribose kinase 99.8 3.1E-17 6.7E-22 157.1 21.1 224 42-274 12-270 (409)
32 COG3001 Uncharacterized protei 99.8 2.3E-17 5E-22 144.4 17.7 244 44-328 4-266 (286)
33 PF03881 Fructosamin_kin: Fruc 99.8 6.7E-18 1.5E-22 157.3 14.6 247 43-328 3-268 (288)
34 PRK06148 hypothetical protein; 99.8 2.7E-16 5.8E-21 169.7 28.9 273 42-349 13-312 (1013)
35 PLN02756 S-methyl-5-thioribose 99.7 6.3E-16 1.4E-20 148.9 25.2 221 42-273 11-272 (418)
36 PRK06149 hypothetical protein; 99.7 1.9E-15 4.2E-20 163.0 28.7 291 36-365 12-332 (972)
37 TIGR01767 MTRK 5-methylthiorib 99.7 2.3E-15 5.1E-20 142.6 18.7 199 68-274 2-235 (370)
38 cd05120 APH_ChoK_like Aminogly 99.6 3.9E-14 8.5E-19 118.5 14.9 144 66-274 3-152 (155)
39 COG3231 Aph Aminoglycoside pho 99.4 2.3E-11 5E-16 106.4 16.2 213 68-300 25-249 (266)
40 PF07914 DUF1679: Protein of u 99.4 2E-11 4.4E-16 119.5 16.8 267 41-316 14-360 (414)
41 TIGR03724 arch_bud32 Kae1-asso 99.3 2.3E-11 5E-16 107.7 14.2 163 69-300 2-178 (199)
42 PRK14879 serine/threonine prot 99.3 4.7E-11 1E-15 106.6 15.7 184 67-318 2-198 (211)
43 PF04655 APH_6_hur: Aminoglyco 99.3 9.3E-11 2E-15 107.2 17.3 187 68-274 9-203 (253)
44 PF02958 EcKinase: Ecdysteroid 99.3 1.7E-10 3.6E-15 108.7 16.8 224 71-300 3-284 (294)
45 COG3642 Mn2+-dependent serine/ 99.3 2E-10 4.2E-15 98.2 14.7 164 68-301 3-180 (204)
46 COG4857 Predicted kinase [Gene 99.2 5.9E-11 1.3E-15 106.9 8.9 205 62-273 31-270 (408)
47 TIGR02905 spore_yutH spore coa 99.1 1.5E-08 3.2E-13 96.4 21.7 221 76-331 20-276 (313)
48 PRK10359 lipopolysaccharide co 99.1 2E-09 4.4E-14 96.8 13.5 88 46-144 22-130 (232)
49 KOG3021 Predicted kinase [Gene 99.1 5.8E-09 1.3E-13 90.9 15.4 197 90-315 36-280 (313)
50 COG3178 Predicted phosphotrans 99.0 5.6E-09 1.2E-13 95.1 13.9 210 111-340 71-307 (351)
51 PRK09605 bifunctional UGMP fam 99.0 6.4E-09 1.4E-13 106.2 14.2 166 66-300 338-515 (535)
52 smart00587 CHK ZnF_C4 abd HLH 99.0 2.9E-09 6.3E-14 94.3 9.2 68 227-300 118-189 (196)
53 PRK01723 3-deoxy-D-manno-octul 98.9 2.2E-08 4.8E-13 91.5 14.5 129 71-263 42-194 (239)
54 KOG3087 Serine/threonine prote 98.9 7.6E-08 1.7E-12 82.3 15.0 175 65-299 11-203 (229)
55 PRK15123 lipopolysaccharide co 98.9 6.8E-08 1.5E-12 89.5 15.0 66 229-300 157-234 (268)
56 PF06293 Kdo: Lipopolysacchari 98.8 2.7E-08 5.8E-13 88.8 10.1 63 229-297 137-206 (206)
57 cd05145 RIO1_like RIO kinase f 98.8 1.7E-07 3.6E-12 82.5 14.0 137 67-261 3-167 (190)
58 cd05146 RIO3_euk RIO kinase fa 98.7 1.7E-07 3.8E-12 82.4 13.0 35 108-142 74-109 (197)
59 smart00090 RIO RIO-like kinase 98.7 4.1E-07 8.9E-12 83.0 14.5 75 67-145 34-136 (237)
60 cd05147 RIO1_euk RIO kinase fa 98.7 2.3E-07 5.1E-12 81.7 11.5 73 68-144 4-104 (190)
61 PRK09902 hypothetical protein; 98.6 1.4E-06 3E-11 77.1 14.2 62 229-299 147-215 (216)
62 PF01163 RIO1: RIO1 family; I 98.6 2.8E-07 6E-12 80.7 9.7 37 108-144 56-95 (188)
63 cd05144 RIO2_C RIO kinase fami 98.6 8.8E-07 1.9E-11 78.4 12.8 75 67-145 21-119 (198)
64 COG0478 RIO-like serine/threon 98.6 6.4E-07 1.4E-11 81.3 10.8 130 67-259 97-250 (304)
65 cd05119 RIO RIO kinase family, 98.6 9.3E-07 2E-11 77.2 11.8 74 67-144 3-102 (187)
66 PRK12274 serine/threonine prot 98.5 9.1E-07 2E-11 78.4 11.2 133 66-264 7-145 (218)
67 PF06176 WaaY: Lipopolysacchar 98.5 2.7E-06 5.8E-11 75.6 12.5 75 66-145 36-131 (229)
68 TIGR02457 TreS_Cterm trehalose 98.4 1.5E-06 3.2E-11 87.4 10.9 198 64-274 168-431 (528)
69 COG1718 RIO1 Serine/threonine 98.3 8.4E-06 1.8E-10 73.4 11.7 158 40-259 31-214 (268)
70 PRK09188 serine/threonine prot 98.2 1.3E-05 2.8E-10 77.5 12.1 137 66-265 23-166 (365)
71 TIGR01982 UbiB 2-polyprenylphe 98.2 1.6E-05 3.4E-10 79.1 11.2 34 229-263 276-309 (437)
72 COG2112 Predicted Ser/Thr prot 98.2 1.8E-05 3.8E-10 67.7 9.8 74 67-146 28-101 (201)
73 COG3570 StrB Streptomycin 6-ki 98.1 1.2E-05 2.5E-10 70.0 8.2 137 120-273 63-203 (274)
74 COG0661 AarF Predicted unusual 98.0 1.6E-05 3.4E-10 80.0 7.7 162 43-264 107-318 (517)
75 KOG2270 Serine/threonine prote 97.9 0.00012 2.6E-09 69.5 10.8 132 69-258 152-311 (520)
76 cd00180 PKc Catalytic domain o 97.9 0.00018 3.8E-09 62.5 11.3 140 69-264 1-146 (215)
77 cd06638 STKc_myosinIIIA Cataly 97.8 0.00024 5.1E-09 66.0 12.4 76 66-144 23-107 (286)
78 PRK04750 ubiB putative ubiquin 97.8 4.5E-05 9.7E-10 77.2 7.7 79 63-145 121-249 (537)
79 cd05614 STKc_MSK2_N N-terminal 97.8 0.00015 3.2E-09 69.3 10.8 140 66-259 5-153 (332)
80 cd05069 PTKc_Yes Catalytic dom 97.8 0.00032 6.9E-09 64.3 12.0 137 67-260 12-151 (260)
81 PLN00034 mitogen-activated pro 97.8 0.00014 3.1E-09 70.1 10.1 133 66-260 79-217 (353)
82 cd05587 STKc_cPKC Catalytic do 97.7 0.00017 3.6E-09 68.7 9.3 137 66-259 5-149 (324)
83 cd05034 PTKc_Src_like Catalyti 97.7 0.00031 6.8E-09 64.2 10.8 143 61-260 5-152 (261)
84 cd05584 STKc_p70S6K Catalytic 97.7 9.4E-05 2E-09 70.5 7.4 138 67-259 2-148 (323)
85 COG2187 Uncharacterized protei 97.7 0.00061 1.3E-08 62.3 11.8 97 226-346 206-306 (337)
86 cd05068 PTKc_Frk_like Catalyti 97.7 0.00038 8.2E-09 63.8 10.8 141 63-260 7-152 (261)
87 cd05591 STKc_nPKC_epsilon Cata 97.7 0.00018 4E-09 68.4 8.7 135 69-260 3-145 (321)
88 cd05583 STKc_MSK_N N-terminal 97.6 0.0002 4.4E-09 66.6 8.2 141 66-260 5-154 (288)
89 PF00069 Pkinase: Protein kina 97.6 0.00021 4.5E-09 65.1 7.9 137 66-260 4-147 (260)
90 cd05070 PTKc_Fyn_Yrk Catalytic 97.6 0.00073 1.6E-08 61.8 11.5 138 66-260 11-151 (260)
91 cd05582 STKc_RSK_N N-terminal 97.6 0.00025 5.3E-09 67.3 8.5 30 230-260 118-147 (318)
92 KOG2268 Serine/threonine prote 97.6 0.0001 2.2E-09 68.8 5.5 126 68-258 99-249 (465)
93 cd05073 PTKc_Hck Catalytic dom 97.6 0.0012 2.5E-08 60.5 12.2 138 65-259 10-150 (260)
94 cd05590 STKc_nPKC_eta Catalyti 97.5 0.00027 5.8E-09 67.2 8.0 30 230-260 116-145 (320)
95 cd05052 PTKc_Abl Catalytic dom 97.5 0.0015 3.2E-08 59.9 12.6 138 67-260 12-153 (263)
96 cd05598 STKc_LATS Catalytic do 97.5 0.00041 9E-09 67.5 9.3 137 65-259 5-149 (376)
97 cd05071 PTKc_Src Catalytic dom 97.5 0.0016 3.4E-08 59.8 12.7 138 66-260 11-151 (262)
98 cd05122 PKc_STE Catalytic doma 97.5 0.0015 3.3E-08 58.7 12.4 141 66-263 5-150 (253)
99 cd05620 STKc_nPKC_delta Cataly 97.5 0.00028 6E-09 67.0 7.8 29 230-259 116-144 (316)
100 cd06656 STKc_PAK3 Catalytic do 97.5 0.00046 1E-08 64.8 9.2 137 65-260 23-164 (297)
101 cd05588 STKc_aPKC Catalytic do 97.5 0.00033 7.2E-09 66.9 8.3 136 68-260 2-145 (329)
102 KOG1187 Serine/threonine prote 97.5 0.00068 1.5E-08 65.7 10.5 142 68-263 82-229 (361)
103 cd05617 STKc_aPKC_zeta Catalyt 97.5 0.00036 7.8E-09 66.6 8.4 135 68-259 2-144 (327)
104 cd05615 STKc_cPKC_alpha Cataly 97.5 0.00034 7.3E-09 66.7 8.1 137 66-259 5-149 (323)
105 cd05114 PTKc_Tec_Rlk Catalytic 97.5 0.0012 2.6E-08 60.2 11.5 137 66-260 9-149 (256)
106 cd05039 PTKc_Csk_like Catalyti 97.5 0.00073 1.6E-08 61.6 9.9 138 67-262 12-153 (256)
107 smart00219 TyrKc Tyrosine kina 97.5 0.00056 1.2E-08 62.1 9.1 142 67-261 5-153 (258)
108 cd05593 STKc_PKB_gamma Catalyt 97.5 0.00047 1E-08 65.9 8.9 30 230-260 115-144 (328)
109 cd00192 PTKc Catalytic domain 97.5 0.00089 1.9E-08 60.8 10.1 148 69-262 3-156 (262)
110 cd05585 STKc_YPK1_like Catalyt 97.5 0.0005 1.1E-08 65.1 8.6 30 230-260 113-142 (312)
111 cd05570 STKc_PKC Catalytic dom 97.5 0.00036 7.9E-09 66.3 7.6 135 69-260 3-145 (318)
112 cd05059 PTKc_Tec_like Catalyti 97.5 0.00049 1.1E-08 62.9 8.3 136 67-260 10-149 (256)
113 cd05600 STKc_Sid2p_Dbf2p Catal 97.5 0.001 2.3E-08 63.5 10.8 138 65-260 5-150 (333)
114 cd05613 STKc_MSK1_N N-terminal 97.4 0.0015 3.2E-08 60.9 11.6 140 66-259 5-153 (290)
115 cd06649 PKc_MEK2 Catalytic dom 97.4 0.0019 4.1E-08 61.7 12.5 76 65-144 9-90 (331)
116 cd06639 STKc_myosinIIIB Cataly 97.4 0.0019 4.1E-08 60.2 12.2 76 66-144 27-111 (291)
117 cd05629 STKc_NDR_like_fungal C 97.4 0.00054 1.2E-08 66.7 8.7 137 65-259 5-149 (377)
118 cd05589 STKc_PKN Catalytic dom 97.4 0.00068 1.5E-08 64.5 9.2 137 66-260 4-150 (324)
119 cd05599 STKc_NDR_like Catalyti 97.4 0.00038 8.2E-09 67.3 7.6 136 66-259 6-149 (364)
120 cd05616 STKc_cPKC_beta Catalyt 97.4 0.00062 1.3E-08 64.8 8.9 29 230-259 121-149 (323)
121 PRK14705 glycogen branching en 97.4 0.00087 1.9E-08 73.5 10.9 220 65-301 148-425 (1224)
122 cd05627 STKc_NDR2 Catalytic do 97.4 0.00057 1.2E-08 66.1 8.8 137 65-259 5-149 (360)
123 cd06644 STKc_STK10_LOK Catalyt 97.4 0.0011 2.4E-08 61.9 10.4 75 66-144 17-96 (292)
124 cd05592 STKc_nPKC_theta_delta 97.4 0.00057 1.2E-08 64.9 8.4 30 230-260 116-145 (316)
125 KOG0605 NDR and related serine 97.4 0.0014 3E-08 64.6 11.0 137 65-259 145-289 (550)
126 KOG0581 Mitogen-activated prot 97.4 0.001 2.2E-08 62.8 9.6 148 65-271 83-237 (364)
127 PF04428 Choline_kin_N: Cholin 97.4 0.00015 3.2E-09 48.9 3.0 39 22-60 8-48 (53)
128 cd06608 STKc_myosinIII_like Ca 97.4 0.001 2.2E-08 61.0 9.7 143 66-261 11-163 (275)
129 cd05594 STKc_PKB_alpha Catalyt 97.4 0.0016 3.4E-08 62.0 11.3 30 229-259 115-144 (325)
130 cd05618 STKc_aPKC_iota Catalyt 97.4 0.00062 1.3E-08 65.0 8.5 30 230-260 116-145 (329)
131 cd05601 STKc_CRIK Catalytic do 97.4 0.00047 1E-08 65.7 7.6 29 230-259 122-150 (330)
132 cd05631 STKc_GRK4 Catalytic do 97.4 0.0011 2.3E-08 61.9 9.9 30 230-260 122-151 (285)
133 cd05067 PTKc_Lck_Blk Catalytic 97.4 0.0025 5.4E-08 58.3 12.2 139 66-261 11-152 (260)
134 cd05595 STKc_PKB_beta Catalyti 97.4 0.00055 1.2E-08 65.2 7.8 30 230-260 115-144 (323)
135 cd05083 PTKc_Chk Catalytic dom 97.4 0.0018 4E-08 58.9 11.0 137 67-262 12-151 (254)
136 cd05628 STKc_NDR1 Catalytic do 97.4 0.00062 1.3E-08 66.0 8.3 138 65-260 5-150 (363)
137 cd05621 STKc_ROCK2 Catalytic d 97.4 0.0009 2E-08 65.2 9.3 30 230-260 162-191 (370)
138 cd06655 STKc_PAK2 Catalytic do 97.4 0.0011 2.5E-08 62.1 9.6 137 65-260 23-164 (296)
139 cd06627 STKc_Cdc7_like Catalyt 97.4 0.0014 3E-08 59.4 9.9 138 66-261 5-149 (254)
140 cd05088 PTKc_Tie2 Catalytic do 97.4 0.0017 3.6E-08 61.2 10.7 77 67-144 13-95 (303)
141 cd05574 STKc_phototropin_like 97.3 0.0037 8E-08 59.0 13.0 141 66-262 6-154 (316)
142 cd05066 PTKc_EphR_A Catalytic 97.3 0.0016 3.4E-08 59.9 10.2 30 230-260 126-155 (267)
143 cd05085 PTKc_Fer Catalytic dom 97.3 0.002 4.4E-08 58.4 10.8 135 68-260 2-142 (250)
144 cd08217 STKc_Nek2 Catalytic do 97.3 0.0019 4.2E-08 58.7 10.7 33 228-261 128-160 (265)
145 PTZ00267 NIMA-related protein 97.3 0.0013 2.8E-08 66.4 10.2 30 230-260 189-218 (478)
146 cd05626 STKc_LATS2 Catalytic d 97.3 0.00083 1.8E-08 65.6 8.5 137 65-259 5-149 (381)
147 cd05625 STKc_LATS1 Catalytic d 97.3 0.00086 1.9E-08 65.4 8.5 137 65-259 5-149 (382)
148 cd05573 STKc_ROCK_NDR_like Cat 97.3 0.00049 1.1E-08 66.0 6.7 138 65-260 5-150 (350)
149 cd05072 PTKc_Lyn Catalytic dom 97.3 0.0035 7.5E-08 57.3 12.1 138 66-260 11-152 (261)
150 cd07872 STKc_PCTAIRE2 Catalyti 97.3 0.0021 4.6E-08 60.6 10.9 75 63-141 8-88 (309)
151 cd05619 STKc_nPKC_theta Cataly 97.3 0.00078 1.7E-08 64.0 8.0 29 230-259 116-144 (316)
152 cd05596 STKc_ROCK Catalytic do 97.3 0.0015 3.3E-08 63.5 10.0 136 65-259 47-190 (370)
153 cd06619 PKc_MKK5 Catalytic dom 97.3 0.0013 2.9E-08 60.9 9.2 29 230-259 115-143 (279)
154 cd05049 PTKc_Trk Catalytic dom 97.3 0.0014 3E-08 60.5 9.3 77 67-144 11-95 (280)
155 cd06621 PKc_MAPKK_Pek1_like Ca 97.3 0.0019 4.1E-08 60.1 10.2 142 65-260 5-154 (287)
156 cd06650 PKc_MEK1 Catalytic dom 97.3 0.0032 7E-08 60.2 12.0 75 66-144 10-90 (333)
157 cd05608 STKc_GRK1 Catalytic do 97.3 0.00092 2E-08 62.1 8.0 29 230-259 117-145 (280)
158 cd06640 STKc_MST4 Catalytic do 97.3 0.0012 2.5E-08 61.2 8.6 29 230-259 121-149 (277)
159 cd07869 STKc_PFTAIRE1 Catalyti 97.3 0.0019 4E-08 60.7 10.1 73 65-141 9-87 (303)
160 PTZ00263 protein kinase A cata 97.3 0.00093 2E-08 63.8 8.1 138 65-260 22-167 (329)
161 cd05597 STKc_DMPK_like Catalyt 97.3 0.0044 9.5E-08 59.2 12.6 137 66-259 6-150 (331)
162 cd07848 STKc_CDKL5 Catalytic d 97.3 0.0015 3.3E-08 60.6 9.2 137 66-260 6-149 (287)
163 cd05082 PTKc_Csk Catalytic dom 97.3 0.0043 9.2E-08 56.5 12.0 136 66-260 11-151 (256)
164 cd06625 STKc_MEKK3_like Cataly 97.2 0.002 4.3E-08 58.8 9.8 30 230-260 124-153 (263)
165 KOG0610 Putative serine/threon 97.2 0.0014 2.9E-08 62.9 8.6 138 66-261 82-229 (459)
166 cd05580 STKc_PKA Catalytic dom 97.2 0.0026 5.7E-08 59.3 10.7 137 66-260 6-150 (290)
167 cd05038 PTKc_Jak_rpt2 Catalyti 97.2 0.0037 8.1E-08 57.7 11.6 142 67-262 10-160 (284)
168 cd07870 STKc_PFTAIRE2 Catalyti 97.2 0.0028 6.1E-08 59.0 10.8 73 65-141 9-87 (291)
169 cd05622 STKc_ROCK1 Catalytic d 97.2 0.0013 2.9E-08 63.9 8.9 137 64-259 46-190 (371)
170 cd07871 STKc_PCTAIRE3 Catalyti 97.2 0.0024 5.2E-08 59.6 10.4 74 64-141 8-87 (288)
171 cd05571 STKc_PKB Catalytic dom 97.2 0.001 2.2E-08 63.3 7.9 30 230-260 115-144 (323)
172 cd05040 PTKc_Ack_like Catalyti 97.2 0.0014 3E-08 59.8 8.5 140 68-260 2-146 (257)
173 cd06917 STKc_NAK1_like Catalyt 97.2 0.0017 3.7E-08 59.9 9.2 136 67-260 7-150 (277)
174 cd06613 STKc_MAP4K3_like Catal 97.2 0.0027 5.8E-08 57.9 10.4 138 66-260 8-150 (262)
175 cd06654 STKc_PAK1 Catalytic do 97.2 0.0016 3.5E-08 61.1 9.0 137 65-260 24-165 (296)
176 cd05084 PTKc_Fes Catalytic dom 97.2 0.0025 5.3E-08 57.9 9.9 136 68-260 2-143 (252)
177 cd05612 STKc_PRKX_like Catalyt 97.2 0.0007 1.5E-08 63.4 6.4 30 230-260 121-150 (291)
178 cd05611 STKc_Rim15_like Cataly 97.2 0.0013 2.9E-08 60.0 8.1 30 230-260 117-146 (260)
179 cd06615 PKc_MEK Catalytic doma 97.2 0.0035 7.7E-08 59.1 11.2 137 66-259 6-148 (308)
180 cd05603 STKc_SGK2 Catalytic do 97.2 0.00083 1.8E-08 63.8 6.9 30 230-260 116-145 (321)
181 cd05096 PTKc_DDR1 Catalytic do 97.2 0.0019 4.1E-08 60.7 9.3 29 230-259 158-186 (304)
182 cd06605 PKc_MAPKK Catalytic do 97.2 0.002 4.2E-08 59.0 9.1 30 229-259 120-149 (265)
183 cd06623 PKc_MAPKK_plant_like C 97.2 0.0049 1.1E-07 56.1 11.7 137 67-260 7-149 (264)
184 cd05101 PTKc_FGFR2 Catalytic d 97.2 0.0024 5.1E-08 60.0 9.7 83 62-144 15-108 (304)
185 cd05053 PTKc_FGFR Catalytic do 97.2 0.0044 9.5E-08 57.7 11.4 79 66-144 17-103 (293)
186 cd08215 STKc_Nek Catalytic dom 97.2 0.0028 6E-08 57.4 9.7 31 230-261 123-153 (258)
187 cd05586 STKc_Sck1_like Catalyt 97.1 0.0017 3.6E-08 62.0 8.5 30 230-260 116-145 (330)
188 cd08221 STKc_Nek9 Catalytic do 97.1 0.0027 5.9E-08 57.7 9.6 31 230-261 121-151 (256)
189 cd05112 PTKc_Itk Catalytic dom 97.1 0.0056 1.2E-07 55.6 11.6 74 66-144 9-86 (256)
190 cd07873 STKc_PCTAIRE1 Catalyti 97.1 0.0043 9.3E-08 58.2 11.0 74 64-141 9-88 (301)
191 cd07861 STKc_CDK1_euk Catalyti 97.1 0.0041 8.9E-08 57.5 10.7 139 66-260 5-150 (285)
192 cd05578 STKc_Yank1 Catalytic d 97.1 0.001 2.2E-08 60.8 6.4 139 66-262 5-151 (258)
193 cd05604 STKc_SGK3 Catalytic do 97.1 0.002 4.3E-08 61.3 8.7 30 230-260 116-145 (325)
194 cd06624 STKc_ASK Catalytic dom 97.1 0.0024 5.2E-08 58.6 8.9 74 67-144 14-92 (268)
195 cd06606 STKc_MAPKKK Catalytic 97.1 0.0027 5.9E-08 57.3 9.1 139 67-263 6-153 (260)
196 cd05632 STKc_GRK5 Catalytic do 97.1 0.0082 1.8E-07 55.9 12.5 140 66-260 5-151 (285)
197 cd05060 PTKc_Syk_like Catalyti 97.1 0.0071 1.5E-07 55.1 11.8 30 230-260 115-144 (257)
198 cd05093 PTKc_TrkB Catalytic do 97.1 0.0029 6.2E-08 58.9 9.4 77 67-144 11-94 (288)
199 cd05633 STKc_GRK3 Catalytic do 97.1 0.0038 8.2E-08 58.0 10.1 29 230-259 117-145 (279)
200 cd05099 PTKc_FGFR4 Catalytic d 97.1 0.0057 1.2E-07 57.8 11.4 80 65-144 16-105 (314)
201 PTZ00426 cAMP-dependent protei 97.1 0.0022 4.8E-08 61.6 8.6 139 65-260 34-180 (340)
202 cd08219 STKc_Nek3 Catalytic do 97.1 0.011 2.3E-07 53.8 12.8 74 66-143 5-84 (255)
203 cd05575 STKc_SGK Catalytic dom 97.1 0.0022 4.8E-08 61.0 8.5 30 230-260 116-145 (323)
204 cd05579 STKc_MAST_like Catalyt 97.1 0.0015 3.3E-08 59.4 7.1 31 230-261 113-143 (265)
205 cd05624 STKc_MRCK_beta Catalyt 97.1 0.0084 1.8E-07 57.2 12.5 30 229-259 121-150 (331)
206 cd07837 STKc_CdkB_plant Cataly 97.1 0.004 8.6E-08 58.0 10.1 73 66-141 6-90 (295)
207 cd05041 PTKc_Fes_like Catalyti 97.1 0.0059 1.3E-07 55.3 10.9 30 230-260 113-142 (251)
208 cd05609 STKc_MAST Catalytic do 97.1 0.0053 1.1E-07 57.7 10.9 137 66-260 6-150 (305)
209 cd06646 STKc_MAP4K5 Catalytic 97.1 0.0028 6E-08 58.1 8.7 137 66-260 14-155 (267)
210 cd05079 PTKc_Jak1_rpt2 Catalyt 97.0 0.0073 1.6E-07 56.0 11.6 141 66-260 9-158 (284)
211 cd05607 STKc_GRK7 Catalytic do 97.0 0.004 8.7E-08 57.7 9.7 30 230-260 115-144 (277)
212 cd07846 STKc_CDKL2_3 Catalytic 97.0 0.0033 7.2E-08 58.2 9.2 137 66-260 6-149 (286)
213 cd08529 STKc_FA2-like Catalyti 97.0 0.01 2.2E-07 53.9 12.1 31 229-260 120-150 (256)
214 cd08220 STKc_Nek8 Catalytic do 97.0 0.0075 1.6E-07 54.7 11.3 31 230-260 121-151 (256)
215 cd07841 STKc_CDK7 Catalytic do 97.0 0.0038 8.2E-08 58.3 9.5 30 230-260 122-151 (298)
216 cd08228 STKc_Nek6 Catalytic do 97.0 0.0028 6.1E-08 58.0 8.5 31 229-260 125-155 (267)
217 cd05100 PTKc_FGFR3 Catalytic d 97.0 0.0045 9.7E-08 59.1 10.1 79 66-144 17-105 (334)
218 cd06626 STKc_MEKK4 Catalytic d 97.0 0.0043 9.3E-08 56.6 9.6 136 67-260 6-148 (264)
219 cd05581 STKc_PDK1 Catalytic do 97.0 0.0011 2.4E-08 61.0 5.7 30 230-260 122-151 (280)
220 PRK13184 pknD serine/threonine 97.0 0.013 2.8E-07 63.0 14.3 75 66-144 7-89 (932)
221 cd05102 PTKc_VEGFR3 Catalytic 97.0 0.0067 1.4E-07 57.9 11.2 80 66-145 12-100 (338)
222 cd05097 PTKc_DDR_like Catalyti 97.0 0.0032 7E-08 58.8 8.9 30 230-260 149-178 (295)
223 cd07840 STKc_CDK9_like Catalyt 97.0 0.0047 1E-07 57.0 9.9 72 66-141 4-84 (287)
224 PHA03212 serine/threonine kina 97.0 0.0078 1.7E-07 59.1 11.8 132 65-260 96-231 (391)
225 PHA03207 serine/threonine kina 97.0 0.0042 9.1E-08 60.9 9.9 135 65-260 96-234 (392)
226 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.0 0.0073 1.6E-07 55.9 11.1 142 66-261 9-158 (284)
227 cd05148 PTKc_Srm_Brk Catalytic 97.0 0.0051 1.1E-07 56.1 9.9 137 67-260 12-153 (261)
228 cd05623 STKc_MRCK_alpha Cataly 97.0 0.011 2.3E-07 56.5 12.3 29 230-259 122-150 (332)
229 cd06648 STKc_PAK_II Catalytic 97.0 0.0055 1.2E-07 57.1 10.0 29 230-259 135-163 (285)
230 cd07863 STKc_CDK4 Catalytic do 97.0 0.019 4.1E-07 53.2 13.6 30 230-260 128-157 (288)
231 cd05062 PTKc_IGF-1R Catalytic 97.0 0.012 2.6E-07 54.3 12.2 29 230-259 139-167 (277)
232 cd05080 PTKc_Tyk2_rpt2 Catalyt 97.0 0.0051 1.1E-07 57.0 9.7 31 230-261 127-157 (283)
233 cd07847 STKc_CDKL1_4 Catalytic 97.0 0.006 1.3E-07 56.4 10.1 138 66-261 6-150 (286)
234 cd08528 STKc_Nek10 Catalytic d 97.0 0.0078 1.7E-07 55.2 10.8 31 229-260 133-163 (269)
235 cd08223 STKc_Nek4 Catalytic do 97.0 0.026 5.6E-07 51.2 14.2 30 230-260 122-151 (257)
236 cd06632 STKc_MEKK1_plant Catal 97.0 0.0037 8E-08 56.7 8.5 30 230-260 122-151 (258)
237 cd05108 PTKc_EGFR Catalytic do 97.0 0.0068 1.5E-07 57.3 10.6 30 230-260 129-158 (316)
238 cd05113 PTKc_Btk_Bmx Catalytic 97.0 0.0097 2.1E-07 54.3 11.3 137 66-260 9-149 (256)
239 cd05033 PTKc_EphR Catalytic do 96.9 0.013 2.9E-07 53.6 12.2 142 66-261 9-156 (266)
240 KOG0592 3-phosphoinositide-dep 96.9 0.0068 1.5E-07 60.1 10.5 146 62-264 73-227 (604)
241 KOG1235 Predicted unusual prot 96.9 0.0046 1E-07 62.4 9.6 37 229-265 320-359 (538)
242 cd06637 STKc_TNIK Catalytic do 96.9 0.0077 1.7E-07 55.3 10.6 30 230-260 131-160 (272)
243 cd06611 STKc_SLK_like Catalyti 96.9 0.0035 7.6E-08 58.0 8.3 74 67-144 11-89 (280)
244 cd06636 STKc_MAP4K4_6 Catalyti 96.9 0.012 2.6E-07 54.4 11.9 139 67-260 22-170 (282)
245 cd06657 STKc_PAK4 Catalytic do 96.9 0.0042 9.2E-08 58.1 8.9 29 230-259 136-164 (292)
246 PLN00009 cyclin-dependent kina 96.9 0.018 3.8E-07 53.7 13.1 72 66-141 7-85 (294)
247 cd06617 PKc_MKK3_6 Catalytic d 96.9 0.014 3.1E-07 53.8 12.4 30 230-260 124-153 (283)
248 cd05572 STKc_cGK_PKG Catalytic 96.9 0.0036 7.8E-08 57.2 8.3 32 229-261 112-143 (262)
249 cd06622 PKc_MAPKK_PBS2_like Ca 96.9 0.0034 7.4E-08 58.2 8.1 30 229-259 122-151 (286)
250 cd06629 STKc_MAPKKK_Bck1_like 96.9 0.0085 1.8E-07 55.0 10.7 31 230-261 128-158 (272)
251 KOG0615 Serine/threonine prote 96.9 0.0073 1.6E-07 58.0 10.1 32 229-260 295-328 (475)
252 cd07831 STKc_MOK Catalytic dom 96.9 0.0078 1.7E-07 55.5 10.3 73 66-141 4-84 (282)
253 cd06609 STKc_MST3_like Catalyt 96.9 0.0048 1E-07 56.8 8.9 135 67-260 7-147 (274)
254 cd05095 PTKc_DDR2 Catalytic do 96.9 0.0064 1.4E-07 56.8 9.8 30 230-260 150-179 (296)
255 cd07832 STKc_CCRK Catalytic do 96.9 0.0095 2.1E-07 55.0 10.9 138 66-261 5-149 (286)
256 cd05047 PTKc_Tie Catalytic dom 96.9 0.0069 1.5E-07 55.8 9.8 30 229-259 131-160 (270)
257 cd05098 PTKc_FGFR1 Catalytic d 96.9 0.012 2.5E-07 55.4 11.5 80 65-144 22-111 (307)
258 cd06643 STKc_SLK Catalytic dom 96.9 0.0054 1.2E-07 56.8 9.1 137 67-260 11-152 (282)
259 cd07833 STKc_CDKL Catalytic do 96.9 0.0048 1E-07 57.1 8.7 140 66-263 6-152 (288)
260 cd06628 STKc_MAPKKK_Byr2_like 96.9 0.013 2.8E-07 53.6 11.3 30 230-260 126-155 (267)
261 cd05104 PTKc_Kit Catalytic dom 96.9 0.015 3.2E-07 56.7 12.4 78 67-144 41-126 (375)
262 cd05087 PTKc_Aatyk1_Aatyk3 Cat 96.9 0.007 1.5E-07 55.6 9.6 29 230-259 120-148 (269)
263 KOG0583 Serine/threonine prote 96.9 0.014 3.1E-07 56.7 12.1 34 229-262 139-172 (370)
264 cd07875 STKc_JNK1 Catalytic do 96.8 0.0058 1.3E-07 59.1 9.3 30 230-260 146-175 (364)
265 PHA03390 pk1 serine/threonine- 96.8 0.02 4.3E-07 52.7 12.5 133 68-260 23-159 (267)
266 cd05046 PTK_CCK4 Pseudokinase 96.8 0.025 5.4E-07 52.0 13.1 79 65-144 9-95 (275)
267 PHA03209 serine/threonine kina 96.8 0.0086 1.9E-07 57.9 10.4 134 64-260 69-206 (357)
268 KOG1989 ARK protein kinase fam 96.8 0.0079 1.7E-07 62.5 10.5 144 63-263 38-198 (738)
269 cd06614 STKc_PAK Catalytic dom 96.8 0.011 2.4E-07 54.8 10.8 137 67-260 25-165 (286)
270 cd05118 STKc_CMGC Catalytic do 96.8 0.0057 1.2E-07 56.4 8.8 32 230-262 118-149 (283)
271 cd05061 PTKc_InsR Catalytic do 96.8 0.029 6.2E-07 52.2 13.5 29 230-259 139-167 (288)
272 cd06652 STKc_MEKK2 Catalytic d 96.8 0.0073 1.6E-07 55.3 9.3 30 230-260 126-155 (265)
273 cd05602 STKc_SGK1 Catalytic do 96.8 0.0035 7.6E-08 59.6 7.4 29 230-259 116-144 (325)
274 cd05109 PTKc_HER2 Catalytic do 96.8 0.0095 2.1E-07 55.0 10.1 30 230-260 129-158 (279)
275 cd06630 STKc_MEKK1 Catalytic d 96.8 0.0047 1E-07 56.5 8.0 31 230-260 123-153 (268)
276 cd05605 STKc_GRK4_like Catalyt 96.8 0.016 3.4E-07 54.0 11.6 30 230-260 122-151 (285)
277 cd05610 STKc_MASTL Catalytic d 96.8 0.013 2.9E-07 61.7 12.2 139 65-261 8-154 (669)
278 cd07874 STKc_JNK3 Catalytic do 96.8 0.0052 1.1E-07 59.2 8.5 30 230-260 139-168 (355)
279 cd07876 STKc_JNK2 Catalytic do 96.8 0.011 2.5E-07 57.0 10.9 30 230-260 143-172 (359)
280 cd05105 PTKc_PDGFR_alpha Catal 96.8 0.058 1.3E-06 53.1 16.0 78 67-144 43-128 (400)
281 cd05577 STKc_GRK Catalytic dom 96.8 0.012 2.5E-07 54.5 10.5 29 230-259 115-143 (277)
282 cd06618 PKc_MKK7 Catalytic dom 96.8 0.0068 1.5E-07 56.7 8.9 29 230-259 135-163 (296)
283 cd08225 STKc_Nek5 Catalytic do 96.8 0.011 2.3E-07 53.7 10.0 141 66-261 5-152 (257)
284 cd05065 PTKc_EphR_B Catalytic 96.8 0.016 3.4E-07 53.2 11.2 77 67-144 10-92 (269)
285 cd06641 STKc_MST3 Catalytic do 96.8 0.017 3.7E-07 53.3 11.5 31 229-260 120-150 (277)
286 PTZ00284 protein kinase; Provi 96.8 0.02 4.3E-07 57.6 12.7 54 66-122 134-187 (467)
287 cd05630 STKc_GRK6 Catalytic do 96.8 0.027 5.8E-07 52.4 12.8 31 229-260 121-151 (285)
288 PTZ00036 glycogen synthase kin 96.8 0.028 6.2E-07 56.0 13.7 30 230-259 190-219 (440)
289 cd05090 PTKc_Ror1 Catalytic do 96.7 0.01 2.2E-07 55.0 9.8 30 230-260 144-173 (283)
290 cd05048 PTKc_Ror Catalytic Dom 96.7 0.009 1.9E-07 55.2 9.4 30 230-260 144-173 (283)
291 smart00221 STYKc Protein kinas 96.7 0.02 4.3E-07 50.5 11.3 138 67-261 5-148 (225)
292 cd05606 STKc_beta_ARK Catalyti 96.7 0.0099 2.2E-07 55.1 9.6 29 230-259 117-145 (278)
293 cd06610 STKc_OSR1_SPAK Catalyt 96.7 0.024 5.2E-07 51.6 12.1 140 66-260 6-151 (267)
294 cd08224 STKc_Nek6_Nek7 Catalyt 96.7 0.03 6.6E-07 51.0 12.7 30 230-260 126-155 (267)
295 cd07862 STKc_CDK6 Catalytic do 96.7 0.038 8.3E-07 51.2 13.6 30 230-260 130-159 (290)
296 cd05051 PTKc_DDR Catalytic dom 96.7 0.0076 1.6E-07 56.1 8.8 30 230-260 150-179 (296)
297 cd05106 PTKc_CSF-1R Catalytic 96.7 0.0096 2.1E-07 58.0 9.9 79 66-144 43-129 (374)
298 cd07844 STKc_PCTAIRE_like Cata 96.7 0.017 3.7E-07 53.7 11.1 137 65-259 9-151 (291)
299 cd06607 STKc_TAO Catalytic dom 96.7 0.0052 1.1E-07 57.8 7.7 32 230-262 135-166 (307)
300 PHA03211 serine/threonine kina 96.7 0.022 4.8E-07 57.2 12.5 133 65-260 173-309 (461)
301 cd07836 STKc_Pho85 Catalytic d 96.7 0.042 9.1E-07 50.7 13.7 73 65-141 4-82 (284)
302 cd06612 STKc_MST1_2 Catalytic 96.7 0.01 2.2E-07 53.8 9.4 73 67-144 9-85 (256)
303 cd08229 STKc_Nek7 Catalytic do 96.7 0.011 2.3E-07 54.1 9.6 30 230-260 126-155 (267)
304 cd05056 PTKc_FAK Catalytic dom 96.7 0.019 4.2E-07 52.7 11.3 140 67-260 12-156 (270)
305 cd07853 STKc_NLK Catalytic dom 96.7 0.0076 1.6E-07 58.5 8.9 29 230-259 123-151 (372)
306 cd06631 STKc_YSK4 Catalytic do 96.7 0.016 3.4E-07 53.0 10.6 30 230-260 122-151 (265)
307 cd06635 STKc_TAO1 Catalytic do 96.7 0.012 2.5E-07 55.8 10.0 30 230-260 145-174 (317)
308 cd05063 PTKc_EphR_A2 Catalytic 96.7 0.01 2.2E-07 54.4 9.3 29 230-259 127-155 (268)
309 KOG0616 cAMP-dependent protein 96.7 0.012 2.7E-07 54.2 9.3 138 65-260 48-193 (355)
310 cd06651 STKc_MEKK3 Catalytic d 96.7 0.0063 1.4E-07 55.8 7.8 30 230-260 126-155 (266)
311 cd05042 PTKc_Aatyk Catalytic d 96.7 0.01 2.2E-07 54.5 9.1 29 230-259 120-148 (269)
312 cd05089 PTKc_Tie1 Catalytic do 96.7 0.013 2.9E-07 54.8 10.0 30 229-259 138-167 (297)
313 cd07850 STKc_JNK Catalytic dom 96.6 0.0095 2E-07 57.4 9.1 30 230-260 138-167 (353)
314 cd05116 PTKc_Syk Catalytic dom 96.6 0.021 4.6E-07 52.0 11.1 30 230-260 115-144 (257)
315 cd07835 STKc_CDK1_like Catalyt 96.6 0.012 2.6E-07 54.4 9.4 29 230-259 119-147 (283)
316 cd05092 PTKc_TrkA Catalytic do 96.6 0.011 2.4E-07 54.7 9.0 78 66-144 10-94 (280)
317 cd05036 PTKc_ALK_LTK Catalytic 96.6 0.047 1E-06 50.4 13.1 78 66-144 11-96 (277)
318 cd07845 STKc_CDK10 Catalytic d 96.6 0.023 4.9E-07 53.4 11.1 138 65-260 11-157 (309)
319 cd06658 STKc_PAK5 Catalytic do 96.6 0.0034 7.4E-08 58.7 5.3 29 230-259 138-166 (292)
320 cd05037 PTK_Jak_rpt1 Pseudokin 96.6 0.015 3.2E-07 52.8 9.4 31 229-260 120-157 (259)
321 KOG0595 Serine/threonine-prote 96.6 0.054 1.2E-06 52.0 13.1 146 66-271 15-175 (429)
322 cd05058 PTKc_Met_Ron Catalytic 96.5 0.012 2.6E-07 53.7 8.7 29 230-259 118-146 (262)
323 cd07856 STKc_Sty1_Hog1 Catalyt 96.5 0.021 4.5E-07 54.5 10.6 30 230-260 128-157 (328)
324 cd07859 STKc_TDY_MAPK_plant Ca 96.5 0.016 3.4E-07 55.2 9.8 30 230-260 123-152 (338)
325 cd06633 STKc_TAO3 Catalytic do 96.5 0.016 3.5E-07 54.8 9.7 30 230-260 141-170 (313)
326 cd07839 STKc_CDK5 Catalytic do 96.5 0.0086 1.9E-07 55.4 7.7 29 230-259 119-147 (284)
327 cd05055 PTKc_PDGFR Catalytic d 96.5 0.035 7.7E-07 52.1 11.9 141 67-259 41-189 (302)
328 cd07830 STKc_MAK_like Catalyti 96.5 0.0073 1.6E-07 55.8 7.1 30 230-260 119-148 (283)
329 cd05050 PTKc_Musk Catalytic do 96.5 0.018 4E-07 53.4 9.6 30 229-259 149-178 (288)
330 cd05115 PTKc_Zap-70 Catalytic 96.5 0.038 8.3E-07 50.4 11.6 29 230-259 115-143 (257)
331 cd05054 PTKc_VEGFR Catalytic d 96.5 0.012 2.6E-07 56.4 8.4 31 229-260 192-222 (337)
332 cd06620 PKc_MAPKK_Byr1_like Ca 96.5 0.024 5.2E-07 52.6 10.3 74 67-144 11-90 (284)
333 cd07857 STKc_MPK1 Catalytic do 96.5 0.023 5E-07 54.1 10.4 29 230-259 125-153 (332)
334 cd05123 STKc_AGC Catalytic dom 96.4 0.02 4.2E-07 51.7 9.4 32 229-261 112-143 (250)
335 PTZ00266 NIMA-related protein 96.4 0.019 4.2E-07 62.1 10.5 76 65-144 17-101 (1021)
336 cd06647 STKc_PAK_I Catalytic d 96.4 0.015 3.2E-07 54.4 8.8 29 230-259 135-163 (293)
337 cd05057 PTKc_EGFR_like Catalyt 96.4 0.043 9.4E-07 50.6 11.8 141 67-261 13-159 (279)
338 cd06659 STKc_PAK6 Catalytic do 96.4 0.01 2.2E-07 55.7 7.6 29 230-259 137-165 (297)
339 cd07866 STKc_BUR1 Catalytic do 96.4 0.018 3.9E-07 53.9 9.4 30 230-260 135-164 (311)
340 cd06642 STKc_STK25-YSK1 Cataly 96.4 0.013 2.8E-07 54.1 8.2 31 229-260 120-150 (277)
341 cd07868 STKc_CDK8 Catalytic do 96.4 0.076 1.6E-06 50.0 13.6 72 67-141 7-84 (317)
342 KOG0658 Glycogen synthase kina 96.4 0.037 8E-07 52.4 11.0 32 229-260 144-175 (364)
343 cd06645 STKc_MAP4K3 Catalytic 96.4 0.014 2.9E-07 53.5 8.2 29 230-259 126-154 (267)
344 cd05094 PTKc_TrkC Catalytic do 96.4 0.043 9.2E-07 51.1 11.7 31 229-260 142-172 (291)
345 cd05035 PTKc_Axl_like Catalyti 96.4 0.04 8.8E-07 50.3 11.4 29 230-259 133-161 (273)
346 cd05045 PTKc_RET Catalytic dom 96.4 0.033 7.2E-07 51.8 10.9 31 229-260 146-176 (290)
347 cd07864 STKc_CDK12 Catalytic d 96.4 0.021 4.6E-07 53.2 9.5 30 230-260 136-165 (302)
348 cd07842 STKc_CDK8_like Catalyt 96.4 0.023 5.1E-07 53.3 9.7 74 66-141 5-88 (316)
349 PTZ00024 cyclin-dependent prot 96.4 0.02 4.4E-07 54.5 9.4 30 230-260 139-168 (335)
350 cd05044 PTKc_c-ros Catalytic d 96.4 0.018 3.9E-07 52.7 8.6 29 230-259 126-159 (269)
351 PHA02988 hypothetical protein; 96.3 0.03 6.4E-07 52.2 10.1 72 67-144 26-109 (283)
352 cd05107 PTKc_PDGFR_beta Cataly 96.3 0.044 9.6E-07 54.0 11.7 78 67-144 43-128 (401)
353 cd08218 STKc_Nek1 Catalytic do 96.3 0.11 2.3E-06 47.1 13.6 30 230-260 121-150 (256)
354 cd07867 STKc_CDC2L6 Catalytic 96.3 0.11 2.5E-06 48.7 14.2 72 67-141 7-84 (317)
355 cd05032 PTKc_InsR_like Catalyt 96.3 0.054 1.2E-06 49.7 11.7 30 229-259 138-167 (277)
356 cd06616 PKc_MKK4 Catalytic dom 96.3 0.053 1.2E-06 50.2 11.6 29 230-259 128-156 (288)
357 cd06634 STKc_TAO2 Catalytic do 96.3 0.015 3.2E-07 54.8 7.8 30 230-260 135-164 (308)
358 cd07852 STKc_MAPK15 Catalytic 96.2 0.024 5.2E-07 54.1 9.0 29 230-259 127-155 (337)
359 cd07880 STKc_p38gamma_MAPK12 C 96.2 0.054 1.2E-06 51.9 11.4 30 230-260 138-167 (343)
360 KOG0600 Cdc2-related protein k 96.2 0.019 4.2E-07 56.5 8.0 155 52-263 107-270 (560)
361 cd07860 STKc_CDK2_3 Catalytic 96.2 0.11 2.4E-06 47.9 13.0 29 230-259 120-148 (284)
362 KOG0668 Casein kinase II, alph 96.1 0.0039 8.5E-08 55.4 2.6 41 227-267 149-189 (338)
363 cd07838 STKc_CDK4_6_like Catal 96.1 0.19 4.1E-06 46.3 14.0 30 230-260 127-156 (287)
364 cd05064 PTKc_EphR_A10 Catalyti 96.0 0.097 2.1E-06 48.0 11.9 81 63-144 6-93 (266)
365 cd07854 STKc_MAPK4_6 Catalytic 96.0 0.037 8.1E-07 53.0 9.3 31 230-260 134-164 (342)
366 cd05074 PTKc_Tyro3 Catalytic d 96.0 0.081 1.7E-06 48.4 11.2 30 230-260 133-162 (273)
367 PRK10345 hypothetical protein; 96.0 0.081 1.8E-06 47.2 10.6 58 67-130 8-70 (210)
368 smart00220 S_TKc Serine/Threon 96.0 0.021 4.5E-07 50.8 6.9 34 230-264 107-140 (244)
369 PTZ00283 serine/threonine prot 95.9 0.068 1.5E-06 54.2 11.3 29 230-259 163-191 (496)
370 cd07843 STKc_CDC2L1 Catalytic 95.9 0.025 5.4E-07 52.6 7.5 29 230-259 126-154 (293)
371 cd05110 PTKc_HER4 Catalytic do 95.9 0.048 1E-06 51.1 9.4 30 230-260 129-158 (303)
372 cd05103 PTKc_VEGFR2 Catalytic 95.9 0.037 8E-07 53.1 8.7 79 66-144 12-99 (343)
373 cd08530 STKc_CNK2-like Catalyt 95.9 0.11 2.3E-06 46.9 11.4 31 230-261 123-153 (256)
374 cd06653 STKc_MEKK3_like_1 Cata 95.9 0.087 1.9E-06 48.1 10.9 30 230-260 126-155 (264)
375 cd07849 STKc_ERK1_2_like Catal 95.9 0.043 9.4E-07 52.3 9.0 30 230-260 126-155 (336)
376 KOG0667 Dual-specificity tyros 95.8 0.0095 2.1E-07 60.1 4.2 37 228-264 307-344 (586)
377 cd07865 STKc_CDK9 Catalytic do 95.7 0.095 2E-06 48.9 10.7 30 230-260 139-168 (310)
378 cd07829 STKc_CDK_like Catalyti 95.7 0.029 6.2E-07 51.6 6.8 30 230-260 118-147 (282)
379 PF07714 Pkinase_Tyr: Protein 95.6 0.097 2.1E-06 47.9 9.9 143 66-261 4-153 (259)
380 cd08216 PK_STRAD Pseudokinase 95.6 0.13 2.7E-06 48.4 10.9 29 230-259 121-149 (314)
381 KOG1164 Casein kinase (serine/ 95.5 0.22 4.8E-06 47.4 12.2 64 65-130 22-89 (322)
382 KOG0598 Ribosomal protein S6 k 95.5 0.038 8.3E-07 52.3 6.7 40 229-269 144-183 (357)
383 cd05086 PTKc_Aatyk2 Catalytic 95.5 0.15 3.3E-06 46.7 10.7 29 230-259 119-147 (268)
384 cd05111 PTK_HER3 Pseudokinase 95.4 0.26 5.5E-06 45.5 12.2 30 230-260 129-158 (279)
385 KOG2052 Activin A type IB rece 95.4 0.057 1.2E-06 52.5 7.7 135 64-261 214-366 (513)
386 KOG0032 Ca2+/calmodulin-depend 95.4 0.15 3.2E-06 49.9 10.7 142 67-265 41-193 (382)
387 cd07855 STKc_ERK5 Catalytic do 95.4 0.087 1.9E-06 50.2 9.0 29 230-259 127-155 (334)
388 KOG3653 Transforming growth fa 95.3 0.014 2.9E-07 57.1 3.3 144 67-272 216-377 (534)
389 cd05043 PTK_Ryk Pseudokinase d 95.3 0.29 6.4E-06 45.0 12.0 29 230-259 137-165 (280)
390 cd07858 STKc_TEY_MAPK_plant Ca 95.3 0.11 2.4E-06 49.5 9.4 30 230-260 128-157 (337)
391 cd07879 STKc_p38delta_MAPK13 C 95.2 0.15 3.2E-06 48.9 10.1 30 230-260 137-166 (342)
392 cd05077 PTK_Jak1_rpt1 Pseudoki 95.2 0.13 2.9E-06 47.0 9.3 31 229-259 124-160 (262)
393 KOG0192 Tyrosine kinase specif 95.1 0.2 4.3E-06 48.6 10.7 71 69-144 49-127 (362)
394 KOG0596 Dual specificity; seri 95.1 0.035 7.6E-07 55.4 5.4 27 229-257 479-505 (677)
395 KOG0984 Mitogen-activated prot 95.1 0.012 2.7E-07 51.6 1.9 33 227-260 166-198 (282)
396 KOG0578 p21-activated serine/t 94.9 0.082 1.8E-06 52.8 7.3 37 229-266 388-424 (550)
397 cd08227 PK_STRAD_alpha Pseudok 94.8 0.2 4.4E-06 47.5 9.9 26 230-256 121-146 (327)
398 cd07851 STKc_p38 Catalytic dom 94.8 0.039 8.4E-07 52.9 4.9 30 230-260 138-167 (343)
399 cd05076 PTK_Tyk2_rpt1 Pseudoki 94.6 0.12 2.6E-06 47.7 7.5 29 230-258 137-171 (274)
400 COG3281 Ble Uncharacterized pr 94.6 0.055 1.2E-06 51.1 4.9 44 229-274 284-336 (438)
401 cd07877 STKc_p38alpha_MAPK14 C 94.6 0.44 9.6E-06 45.6 11.6 30 230-260 140-169 (345)
402 KOG0694 Serine/threonine prote 94.5 0.3 6.5E-06 50.1 10.3 153 62-272 368-529 (694)
403 KOG1163 Casein kinase (serine/ 94.5 0.41 8.9E-06 43.3 10.0 71 64-139 18-93 (341)
404 KOG0603 Ribosomal protein S6 k 94.5 0.046 9.9E-07 55.3 4.5 36 229-264 434-469 (612)
405 cd08222 STKc_Nek11 Catalytic d 94.3 0.071 1.5E-06 48.5 5.1 30 229-260 125-154 (260)
406 KOG0594 Protein kinase PCTAIRE 94.2 0.029 6.2E-07 52.8 2.2 30 229-259 139-168 (323)
407 KOG0193 Serine/threonine prote 94.1 0.1 2.2E-06 52.7 5.9 34 230-264 508-541 (678)
408 KOG1152 Signal transduction se 94.1 0.7 1.5E-05 46.8 11.6 143 63-260 563-719 (772)
409 cd05078 PTK_Jak2_Jak3_rpt1 Pse 94.0 0.13 2.7E-06 46.9 6.2 30 230-259 120-156 (258)
410 KOG0197 Tyrosine kinases [Sign 94.0 0.24 5.1E-06 49.1 8.2 31 229-260 322-352 (468)
411 KOG0587 Traf2- and Nck-interac 93.9 0.61 1.3E-05 49.2 11.3 76 67-145 25-109 (953)
412 KOG2269 Serine/threonine prote 93.9 0.26 5.7E-06 46.6 7.8 37 108-144 333-370 (531)
413 KOG0608 Warts/lats-like serine 93.8 0.04 8.7E-07 55.9 2.4 32 227-259 746-777 (1034)
414 KOG0575 Polo-like serine/threo 93.7 0.51 1.1E-05 47.7 10.1 31 229-260 137-167 (592)
415 KOG0983 Mitogen-activated prot 93.4 0.054 1.2E-06 49.6 2.5 34 226-260 208-241 (391)
416 PHA02882 putative serine/threo 93.4 0.049 1.1E-06 50.9 2.3 29 230-259 146-174 (294)
417 KOG0586 Serine/threonine prote 92.7 1.9 4.1E-05 43.8 12.3 44 228-276 173-216 (596)
418 PLN03225 Serine/threonine-prot 92.7 0.066 1.4E-06 55.2 2.2 30 230-259 275-304 (566)
419 KOG1166 Mitotic checkpoint ser 92.6 0.13 2.9E-06 55.4 4.4 30 229-258 813-848 (974)
420 KOG0599 Phosphorylase kinase g 92.6 0.1 2.2E-06 47.8 3.0 41 230-271 143-183 (411)
421 cd08226 PK_STRAD_beta Pseudoki 92.3 2.9 6.2E-05 39.5 12.9 27 230-257 121-147 (328)
422 PF10009 DUF2252: Uncharacteri 92.3 0.11 2.3E-06 50.9 3.0 74 225-299 39-118 (385)
423 KOG1167 Serine/threonine prote 91.9 0.19 4E-06 48.6 4.0 33 227-259 149-181 (418)
424 cd05091 PTKc_Ror2 Catalytic do 91.9 0.14 3.1E-06 47.2 3.2 30 230-260 144-173 (283)
425 PLN00113 leucine-rich repeat r 91.8 1.1 2.4E-05 49.3 10.7 71 67-144 696-770 (968)
426 cd07878 STKc_p38beta_MAPK11 Ca 91.6 0.1 2.2E-06 49.9 2.0 30 230-260 138-167 (343)
427 KOG0593 Predicted protein kina 91.4 0.31 6.7E-06 45.5 4.7 30 230-260 121-150 (396)
428 PHA03210 serine/threonine kina 91.3 0.11 2.3E-06 52.9 1.8 29 230-259 287-315 (501)
429 KOG4236 Serine/threonine prote 91.3 0.67 1.5E-05 46.4 7.2 32 229-260 683-716 (888)
430 KOG2345 Serine/threonine prote 91.3 0.17 3.8E-06 45.7 2.9 33 229-262 148-180 (302)
431 cd05075 PTKc_Axl Catalytic dom 91.3 0.1 2.2E-06 47.8 1.5 30 230-260 132-161 (272)
432 KOG0660 Mitogen-activated prot 91.3 0.095 2.1E-06 49.6 1.3 35 228-263 143-177 (359)
433 KOG1006 Mitogen-activated prot 90.6 0.088 1.9E-06 48.1 0.4 32 228-260 186-217 (361)
434 cd07834 STKc_MAPK Catalytic do 90.6 0.22 4.7E-06 47.1 3.2 32 230-262 123-154 (330)
435 PF10707 YrbL-PhoP_reg: PhoP r 90.2 6 0.00013 34.9 11.7 68 67-140 7-100 (199)
436 KOG1035 eIF-2alpha kinase GCN2 89.8 0.32 6.9E-06 53.1 3.7 32 228-260 715-746 (1351)
437 KOG0588 Serine/threonine prote 89.5 0.2 4.3E-06 51.2 2.0 34 228-262 130-163 (786)
438 KOG0670 U4/U6-associated splic 89.1 0.22 4.8E-06 49.6 1.9 33 228-260 554-586 (752)
439 cd05576 STKc_RPK118_like Catal 89.0 0.35 7.5E-06 43.5 3.1 29 229-258 104-132 (237)
440 KOG0659 Cdk activating kinase 88.7 0.27 5.9E-06 44.9 2.1 31 230-261 121-151 (318)
441 KOG0664 Nemo-like MAPK-related 88.5 0.27 5.9E-06 45.1 1.9 33 229-262 175-207 (449)
442 KOG4250 TANK binding protein k 88.1 0.51 1.1E-05 48.7 3.7 32 229-260 139-173 (732)
443 PLN03224 probable serine/threo 87.6 0.36 7.9E-06 49.0 2.4 29 230-259 329-357 (507)
444 COG4320 Uncharacterized protei 87.4 0.88 1.9E-05 42.5 4.5 72 225-298 54-132 (410)
445 KOG0665 Jun-N-terminal kinase 87.4 0.34 7.3E-06 45.4 1.8 36 228-264 136-171 (369)
446 PF12260 PIP49_C: Protein-kina 87.1 5.1 0.00011 35.0 9.1 33 109-141 8-40 (188)
447 PLN00181 protein SPA1-RELATED; 85.9 0.98 2.1E-05 48.7 4.8 31 229-260 99-129 (793)
448 KOG0198 MEKK and related serin 83.8 0.81 1.8E-05 43.4 2.6 33 228-260 135-167 (313)
449 KOG0577 Serine/threonine prote 83.6 0.53 1.1E-05 47.8 1.3 36 230-266 146-181 (948)
450 COG5072 ALK1 Serine/threonine 83.3 1.6 3.5E-05 42.2 4.3 43 225-269 337-379 (488)
451 KOG0663 Protein kinase PITSLRE 82.6 0.77 1.7E-05 43.5 1.9 34 229-263 196-230 (419)
452 KOG0585 Ca2+/calmodulin-depend 81.2 0.96 2.1E-05 44.7 2.0 32 229-261 229-260 (576)
453 KOG0612 Rho-associated, coiled 81.1 0.82 1.8E-05 49.7 1.7 31 228-259 193-223 (1317)
454 KOG0582 Ste20-like serine/thre 80.9 1 2.2E-05 44.1 2.1 29 229-258 145-173 (516)
455 KOG0671 LAMMER dual specificit 76.7 3.8 8.2E-05 39.5 4.4 35 228-262 210-263 (415)
456 PF07387 Seadorna_VP7: Seadorn 76.3 2 4.2E-05 38.8 2.3 36 220-256 153-188 (308)
457 KOG0591 NIMA (never in mitosis 76.2 1.5 3.2E-05 40.7 1.6 31 229-260 147-177 (375)
458 KOG0579 Ste20-like serine/thre 75.1 1.8 3.9E-05 44.5 2.0 32 229-261 149-180 (1187)
459 KOG0584 Serine/threonine prote 74.9 3.7 8E-05 42.0 4.1 34 226-259 161-194 (632)
460 KOG1151 Tousled-like protein k 74.9 4.8 0.0001 39.7 4.7 34 227-260 587-622 (775)
461 KOG0662 Cyclin-dependent kinas 74.1 1.8 3.9E-05 37.4 1.5 29 230-259 121-149 (292)
462 KOG1165 Casein kinase (serine/ 74.1 2.6 5.6E-05 40.1 2.6 42 91-133 55-96 (449)
463 TIGR02569 TIGR02569_actnb cons 73.6 5.2 0.00011 36.6 4.3 56 214-273 159-215 (272)
464 KOG0199 ACK and related non-re 72.8 15 0.00033 38.5 7.8 141 69-259 118-260 (1039)
465 KOG0607 MAP kinase-interacting 72.3 5.2 0.00011 37.9 4.1 32 228-259 194-227 (463)
466 cd05172 PIKKc_DNA-PK DNA-depen 71.1 3.5 7.6E-05 37.4 2.7 32 228-259 135-166 (235)
467 KOG0589 Serine/threonine prote 70.4 18 0.0004 35.7 7.6 40 229-269 125-164 (426)
468 KOG0590 Checkpoint kinase and 70.0 5.5 0.00012 41.5 4.2 39 227-266 437-475 (601)
469 cd00142 PI3Kc_like Phosphoinos 69.8 4.1 9E-05 36.5 2.9 36 229-264 128-163 (219)
470 KOG0661 MAPK related serine/th 69.5 2.5 5.4E-05 41.9 1.5 31 228-259 128-158 (538)
471 KOG0666 Cyclin C-dependent kin 69.4 3.2 6.9E-05 39.1 2.1 31 230-260 152-185 (438)
472 PF14531 Kinase-like: Kinase-l 69.2 2.8 6E-05 39.3 1.7 30 230-260 165-194 (288)
473 KOG0604 MAP kinase-activated p 68.9 2.7 5.7E-05 39.4 1.4 40 229-268 180-221 (400)
474 KOG1095 Protein tyrosine kinas 68.7 42 0.00092 37.0 10.5 30 229-259 821-850 (1025)
475 cd00892 PIKKc_ATR ATR (Ataxia 68.4 4.1 8.9E-05 37.0 2.6 32 229-260 139-170 (237)
476 KOG1236 Predicted unusual prot 68.4 2.5 5.5E-05 41.5 1.3 29 230-258 365-396 (565)
477 cd05124 AFK Actin-Fragmin Kina 68.1 51 0.0011 29.8 9.3 50 64-125 2-52 (238)
478 KOG0574 STE20-like serine/thre 67.8 1.6 3.5E-05 40.7 -0.2 28 232-260 151-178 (502)
479 cd05171 PIKKc_ATM Ataxia telan 67.7 4.2 9.2E-05 37.9 2.6 31 228-258 180-210 (279)
480 KOG0611 Predicted serine/threo 66.8 3 6.4E-05 40.7 1.4 32 228-260 171-202 (668)
481 cd05170 PIKKc_SMG1 Suppressor 66.6 4.8 0.0001 38.1 2.8 31 228-258 208-238 (307)
482 cd05169 PIKKc_TOR TOR (Target 65.0 4.9 0.00011 37.5 2.5 32 227-258 179-210 (280)
483 cd05164 PIKKc Phosphoinositide 64.3 5.2 0.00011 36.0 2.4 32 229-260 131-162 (222)
484 COG0515 SPS1 Serine/threonine 63.4 3.9 8.5E-05 37.2 1.5 29 231-259 122-150 (384)
485 KOG0669 Cyclin T-dependent kin 61.9 3.8 8.3E-05 37.4 1.1 29 229-258 143-171 (376)
486 cd05163 TRRAP TRansformation/t 61.9 7.3 0.00016 35.8 2.9 30 229-258 154-183 (253)
487 PHA03111 Ser/Thr kinase; Provi 61.6 14 0.0003 35.5 4.6 47 65-120 90-138 (444)
488 smart00146 PI3Kc Phosphoinosit 61.5 7.6 0.00017 34.3 2.9 35 229-264 101-135 (202)
489 KOG4717 Serine/threonine prote 61.4 6.1 0.00013 39.8 2.4 34 227-260 135-168 (864)
490 PF09192 Act-Frag_cataly: Acti 61.3 65 0.0014 29.9 9.0 36 234-269 182-219 (275)
491 KOG4279 Serine/threonine prote 59.7 19 0.00041 37.9 5.6 30 229-258 694-723 (1226)
492 KOG1345 Serine/threonine kinas 59.2 5.8 0.00013 36.7 1.7 33 228-260 139-172 (378)
493 KOG0614 cGMP-dependent protein 56.8 6.1 0.00013 39.7 1.6 30 229-259 539-568 (732)
494 KOG4158 BRPK/PTEN-induced prot 56.7 13 0.00029 36.4 3.7 33 228-260 359-394 (598)
495 PF05445 Pox_ser-thr_kin: Poxv 56.1 14 0.00029 35.7 3.7 46 65-119 85-132 (434)
496 KOG4721 Serine/threonine prote 55.3 6.4 0.00014 40.2 1.4 30 230-260 232-261 (904)
497 PF00454 PI3_PI4_kinase: Phosp 55.1 6.6 0.00014 35.3 1.5 32 229-260 134-165 (235)
498 KOG1094 Discoidin domain recep 52.1 7.8 0.00017 39.7 1.5 31 228-259 655-685 (807)
499 KOG0580 Serine/threonine prote 50.4 5.6 0.00012 36.1 0.2 33 229-262 143-175 (281)
500 KOG1027 Serine/threonine prote 50.2 9.9 0.00021 40.4 1.9 31 229-259 625-659 (903)
No 1
>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-70 Score=489.79 Aligned_cols=345 Identities=44% Similarity=0.785 Sum_probs=313.7
Q ss_pred hhcCceeeccccccccCCCCCCcchHHHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEc
Q 016788 18 RENGSTEFLSSPLIVDTSLSLPLMTPRVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLY 97 (382)
Q Consensus 18 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~ 97 (382)
...++.-+|.++..+ ++.+.++..++++++|+.+.|.|+ +..++++.+++|+||.++.+..... -...+++|+|
T Consensus 42 ~p~~~~q~~~~~~~v-~~~~~~d~~~ga~eLlk~Lrp~W~---~~~v~~~~fs~gitNkL~~~~vg~~--~e~~v~vrvy 115 (391)
T KOG4720|consen 42 APPDSPQFPAFDAFV-ISVEETDCIPGALELLKKLRPHWK---PPEVTFKRFSDGITNKLFSCYVGEN--MEDHVLVRVY 115 (391)
T ss_pred cCCCccccccccceE-EecChhhhhhhHHHHHHHhcccCC---ccceeeeeeccchhHHHHHhhcccc--cceeEEEEec
Confidence 345666778888888 888999999999999999999998 5678899999999999998877542 2247999999
Q ss_pred CCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCC-CCCCC
Q 016788 98 GPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIP-GSKEP 176 (382)
Q Consensus 98 ~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~-~~~~p 176 (382)
|+.++..|||++|...++.|+..|++|++|+.|.||+|++||+|++|.++++++|++...||+.||+||++..+ ....|
T Consensus 116 g~~te~vIdre~Ev~afk~L~a~G~ap~Ly~tF~NGLvyefi~g~tL~p~~mr~pki~~lIAr~mak~H~~~~~g~~pkp 195 (391)
T KOG4720|consen 116 GHNTELVIDRENEVIAFKLLAAYGFAPKLYGTFNNGLVYEFIQGKTLEPEHMREPKIFRLIARRMAKIHSIVATGGNPKP 195 (391)
T ss_pred cCCCceeeccHHHHHHHHHHHHcCcChhhhheecCceEEeeecCcccChhhccChHHHHHHHHHHHHhheeccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887 34567
Q ss_pred cchhhHHHHHHHhccCCCCcH-HHhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEe
Q 016788 177 QLWNDVSKFFEKASSLKFDEI-EKQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDF 255 (382)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDf 255 (382)
.+|.++.+|++.+... |.+. .++..+.......|.+++.+|++.+.....|.|||||||..+||++++..+.+.+|||
T Consensus 196 ~lw~km~~f~~lv~~~-f~de~~kq~~~~~~~~~~L~~Ei~~l~E~l~~L~sPVVFcHNDLL~~Niiy~~~~~~v~fIDY 274 (391)
T KOG4720|consen 196 PLWEKMRKFLQLVPTS-FEDEINKQNLFDEPSPEDLGEEISKLKEMLSMLKSPVVFCHNDLLCGNIIYDSEKGSVEFIDY 274 (391)
T ss_pred cHHHHHHHHHHhcCch-hhcccchhhcccCCCHHHHHHHHHHHHHHHHhhCCCeEEeecchhhcceeeccccCcEEEEee
Confidence 8999999999998763 3332 3444444556889999999999999889999999999999999999987889999999
Q ss_pred ecCCCCCchhhHHhhhhhcCcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 016788 256 EYGSYNYRGYDIGNHFSEYAGY-DCDYSLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLFWALWAL 334 (382)
Q Consensus 256 E~a~~~~~~~Dla~~~~e~~~~-~~~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~ 334 (382)
|||++|+.+|||||||+|++|. ++||+.||+.|.|.+||+.|++..++.+++..|++.+|.+|+.|.+++|++|++||+
T Consensus 275 EYa~yNY~afDIgNHFnE~aGv~evDYSlyp~rE~Q~qwl~~YLq~~kg~evs~~eVe~lfvqvn~FalAsHlfWavWAl 354 (391)
T KOG4720|consen 275 EYAGYNYQAFDIGNHFNEYAGVEEVDYSLYPTREEQLQWLRDYLQAYKGKEVSDTEVETLFVQVNQFALASHLFWAVWAL 354 (391)
T ss_pred cccccchhheehhhhHHhhcCCCccchhcCCCHHHHHHHHHHHHhhccCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 699999999999999999999999899999999999999999999999999999999
Q ss_pred HhcccCCCCcchHHHHHHHHHHHHHHHHHHHHHhH
Q 016788 335 IQAKMSPIDFDYLGYFFLRYNEYKKQKEMCVSLAQ 369 (382)
Q Consensus 335 ~q~~~~~~~fdy~~y~~~R~~~y~~~k~~~~~~~~ 369 (382)
+|+..|+|||||++||..||+.|.++|.++++++.
T Consensus 355 lQA~~StIdFdylgYa~lRyneY~k~k~~~~sl~~ 389 (391)
T KOG4720|consen 355 LQAQNSTIDFDYLGYAFLRYNEYQKRKPEVLSLIE 389 (391)
T ss_pred HHhhcCcccccchhhHHHHHHHhhccCcceeeecc
Confidence 99999999999999999999999999999988753
No 2
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=100.00 E-value=6.5e-65 Score=485.28 Aligned_cols=329 Identities=77% Similarity=1.278 Sum_probs=291.7
Q ss_pred HHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEE
Q 016788 48 LCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLL 127 (382)
Q Consensus 48 ~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~ 127 (382)
+|++++|+|++++++.+++++++||+||.+|+|+..+..++..+||+|++++.++.+|||.+|..+++.|++.|++|+++
T Consensus 1 ~~~~~~~~w~~~~~~~i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l 80 (330)
T PLN02421 1 VCKALFKGWSDLDDSDFSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLL 80 (330)
T ss_pred CchHhCCccccCCcCceEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCcee
Confidence 47889999998888899999999999999999987654322348999999999989999999999999999999999999
Q ss_pred EEeCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccC
Q 016788 128 AVFGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETIS 207 (382)
Q Consensus 128 ~~~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (382)
+.+++|+|++|++|++++..++.++.....+|+.|++||+.+++....|.+|.++.+|++.+....+........+....
T Consensus 81 ~~~~~G~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~ 160 (330)
T PLN02421 81 GVFGNGMIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETIS 160 (330)
T ss_pred EEeCCcEeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccC
Confidence 99999999999999999999999999999999999999999887766678899999999887654444443333343445
Q ss_pred HHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCH
Q 016788 208 FKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNK 287 (382)
Q Consensus 208 ~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~ 287 (382)
+..+.+++..++..+.....+.||||||++++|||++++++.+.+||||||++|||+||||++|+||++|.++++.||+.
T Consensus 161 ~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~fDIa~~f~E~~~~~~~~~~~p~~ 240 (330)
T PLN02421 161 FEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYDIGNHFNEYAGFDCDYSLYPSK 240 (330)
T ss_pred HHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCccHHHHHHHHHHHcccccCcccCcCH
Confidence 67788888888887766678899999999999999975457899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHHHHHHhcccCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 016788 288 DEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQKEMCVSL 367 (382)
Q Consensus 288 ~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q~~~~~~~fdy~~y~~~R~~~y~~~k~~~~~~ 367 (382)
+++..|++.|++...+...+..++++++.+|+.|++++|++|++||++|+..|+++|||++||..||++|+++|+++..+
T Consensus 241 ~~~~~fl~~Y~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~W~lWa~iq~~~s~i~fdf~~ya~~R~~~y~~~k~~~~~~ 320 (330)
T PLN02421 241 EEQYHFFRHYLRPDDPEEVSDAELEELFVETNFYALASHLYWAIWAIVQAKMSPIDFDYLGYFFLRYKEYKRQKEKLLSL 320 (330)
T ss_pred HHHHHHHHHhCCcccCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcCCcCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999764444567788999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhhcCC
Q 016788 368 AQSYLSRSG 376 (382)
Q Consensus 368 ~~~~~~~~~ 376 (382)
.-++|+..+
T Consensus 321 ~~~~~~~~~ 329 (330)
T PLN02421 321 VRSYLSGSS 329 (330)
T ss_pred chhhhcccC
Confidence 999988764
No 3
>PLN02236 choline kinase
Probab=100.00 E-value=6.7e-59 Score=445.74 Aligned_cols=325 Identities=35% Similarity=0.651 Sum_probs=278.5
Q ss_pred CCCCcchHHHHHHHHHhcCCCCCC-CCCCeEEEEecceeeeeEEEEEecCCC-CCCeeEEEEEcCCCCCcccchHHHHHH
Q 016788 36 LSLPLMTPRVIALCKDLFKQWSKL-DDSRFSVDTVSGGITNLLLKVTVKEES-GNDVSVTVRLYGPNTDIVINRQRELQA 113 (382)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~W~~~-~~~~~~i~~l~gG~tN~~y~v~~~~~~-~~~~~~vlRi~~~~~~~~idr~~E~~~ 113 (382)
.|.+.....++.+|+++.|.|+++ .++.+++++++||+||.+|+|+..++. ..+.++|+|++++.++.++||.+|..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~ 89 (344)
T PLN02236 10 LSSGRIPDELKRILHSLASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRT 89 (344)
T ss_pred ccCCCChHHHHHHHHHhcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHH
Confidence 345667789999999999999875 678999999999999999999865432 123589999999999999999999999
Q ss_pred HHHHHhCCCCceEEEEeCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCC
Q 016788 114 IKYLSAAGFGAKLLAVFGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLK 193 (382)
Q Consensus 114 l~~l~~~gl~P~~~~~~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~ 193 (382)
++.|++.|++|++++.+++|+|++|++|++++..+++++.+..++|+.|++||+++.+....+..|.++..|++++..+.
T Consensus 90 ~~~l~~~gl~P~~~~~~~~g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~ 169 (344)
T PLN02236 90 FECMSRHGQGPRLLGRFPNGRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLC 169 (344)
T ss_pred HHHHHHcCCCCceEEEECCceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999998877666788999999987764321
Q ss_pred CCcHHHhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhh
Q 016788 194 FDEIEKQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSE 273 (382)
Q Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e 273 (382)
... .. .......+.+++.+|++.+.....+.|+||||++++|||++++++.+.+||||||++|+|+||||++|+|
T Consensus 170 ~~~--~~---~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~~~Dia~~~~e 244 (344)
T PLN02236 170 SPE--EA---KEFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPVAYDIANHFCE 244 (344)
T ss_pred Ccc--hh---hhcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccccchHHHHHHHHHH
Confidence 110 00 1123456777888888777656778999999999999999754567999999999999999999999999
Q ss_pred cCc-------cccCCCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHHHHHHhcccCCCCcch
Q 016788 274 YAG-------YDCDYSLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLFWALWALIQAKMSPIDFDY 346 (382)
Q Consensus 274 ~~~-------~~~~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q~~~~~~~fdy 346 (382)
+++ +.++++.||+.+++..|++.|++.. +..++..++..++.+|+.|.+++|++|++||++|+..|+++|||
T Consensus 245 ~~~~y~~~~~~~~~~~~~~~~~~~~~fi~~Yl~~~-g~~~~~~~~~~l~~~v~~~~~~~~l~W~lWa~iq~~~s~~~fdy 323 (344)
T PLN02236 245 MAADYHSETPHILDYSKYPGEEERRRFIRTYLSSS-GEEPSDEEVEQLLDDVEKYTLASHLFWGLWGIISGHVNKIDFDY 323 (344)
T ss_pred HHHhhcCCCcccCchhhCcCHHHHHHHHHHHHhhc-CCCchHHHHHHHHHHHHHHhhHhHHHHHHHHHHhcccCCCCCCH
Confidence 874 2356778899999999999999753 33456788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 016788 347 LGYFFLRYNEYKKQKEMCVS 366 (382)
Q Consensus 347 ~~y~~~R~~~y~~~k~~~~~ 366 (382)
+.||..||+.|+++|+++++
T Consensus 324 ~~Ya~~R~~~y~~~k~~~~~ 343 (344)
T PLN02236 324 MEYARQRFEQYWLRKPELLG 343 (344)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999865
No 4
>PTZ00296 choline kinase; Provisional
Probab=100.00 E-value=7.2e-59 Score=455.76 Aligned_cols=316 Identities=27% Similarity=0.474 Sum_probs=264.0
Q ss_pred HHHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCC-----CeeEEEEEcCCCCCcccchHHHHHHHHHH
Q 016788 43 PRVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGN-----DVSVTVRLYGPNTDIVINRQRELQAIKYL 117 (382)
Q Consensus 43 ~~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~-----~~~~vlRi~~~~~~~~idr~~E~~~l~~l 117 (382)
+.+..+|++++|+|..++++.++|++++||+||.+|+|+..++... +++||+|+||++++.++||..|..+++.|
T Consensus 87 ~~~~~i~~~~vp~W~~~~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~l 166 (442)
T PTZ00296 87 LYIKKICLEKVPEWRRFTEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTM 166 (442)
T ss_pred HHHHHHHHHHCCccccCCcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHH
Confidence 3566788999999998888889999999999999999997643211 35899999999999999999999999999
Q ss_pred HhCCCCceEEEEeCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccC----C--CCCCCcchhhHHHHHHHhcc
Q 016788 118 SAAGFGAKLLAVFGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEI----P--GSKEPQLWNDVSKFFEKASS 191 (382)
Q Consensus 118 ~~~gl~P~~~~~~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~----~--~~~~p~~~~~~~~~~~~~~~ 191 (382)
++.|++|++++.+++|+|++|++|++++..+++++....++|+.|++||+... + ....|..|.++..|...+..
T Consensus 167 s~~gi~P~l~~~f~gg~I~efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~~~~~~f~~~p~~f~~i~~~~~~~~~ 246 (442)
T PTZ00296 167 SKYRIAPQLLNTFSGGRIEEWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLSK 246 (442)
T ss_pred HHCCCCCceEEEeCCCEEEEeeCCccCCHHHcCCHHHHHHHHHHHHHHhcccccccCchhccCCCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999852 2 12356689999999887753
Q ss_pred CCCCcHHHhhcccccCHHHHHHHHHHHHHHhc------ccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchh
Q 016788 192 LKFDEIEKQSMYETISFKEVQKEIVELKELAG------HLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGY 265 (382)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~------~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~ 265 (382)
....... ...+..+.+++.++...+. ....+.||||||+.++|||.. ++.+.|||||||++|+|+|
T Consensus 247 ~~~~~~~------~~~~~~l~~e~~~l~~~l~~~~~l~~~~~~~VfCHNDl~~~NiL~~--~~~l~LIDfEYAg~ndpaf 318 (442)
T PTZ00296 247 YKNIEKY------QRDIHKYIKESEKFIKFMKVYSKSDNLANDIVFCHNDLQENNIINT--NKCLRLIDFEYSGYNFLAT 318 (442)
T ss_pred hccchHh------HhhHHHHHHHHHHHHHHHHhhcccccccCCeeEEeCCCCccceeec--CCCEEEEeecccccccHHH
Confidence 2221110 0124455566666665543 345689999999999999985 3559999999999999999
Q ss_pred hHHhhhhhcCc---------cccCCCCCCCHHHHHHHHHHhcCCCCC---CCCCHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 016788 266 DIGNHFSEYAG---------YDCDYSLYPNKDEQNHFFRHYLRPDKP---EEVSDQDLEVLYVEANTFMLASHLFWALWA 333 (382)
Q Consensus 266 Dla~~~~e~~~---------~~~~~~~~p~~~~~~~fl~~Y~~~~~~---~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa 333 (382)
|||++|+||++ |.++++.||+.++|..|+++|++.... ...+.++++.++.+|+.|.+++|++|++||
T Consensus 319 DIAn~f~E~~~dy~~~~~p~f~~d~~~yPs~e~q~~Fi~~Yl~~~~~~~~~~~~~~~v~~l~~ev~~f~l~shl~W~lWa 398 (442)
T PTZ00296 319 DIANFFIETTIDYSVSHYPFFAIDKKKYISYENRKLFITAYLSNYLDKSLVVPNPKIIDQILEAVEVQALGAHLLWGFWS 398 (442)
T ss_pred HHHHHHHHHhhhcCCCCCCccccCcccCcCHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 99999999983 556889999999999999999975311 112445789999999999999999999999
Q ss_pred HHhccc--CCCCcchHHHHHHHHHHHHHHHHHHHH
Q 016788 334 LIQAKM--SPIDFDYLGYFFLRYNEYKKQKEMCVS 366 (382)
Q Consensus 334 ~~q~~~--~~~~fdy~~y~~~R~~~y~~~k~~~~~ 366 (382)
++|+.. |.++|||+.||..||++|+++|+.+++
T Consensus 399 iiqa~~~~s~idFDy~~Ya~~R~~~Y~~~k~~~~~ 433 (442)
T PTZ00296 399 IIRGYQTKSYNEFDFFLYAKERFKMYDEQKEYLIS 433 (442)
T ss_pred HHhCCcccCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999974 568999999999999999999999865
No 5
>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=4.5e-55 Score=404.30 Aligned_cols=329 Identities=34% Similarity=0.634 Sum_probs=277.8
Q ss_pred CcchHHHHHHHHHhcC-CCCCCCCCCeEEEEecceeeeeEEEEEecCCCC----CCeeEEEEEcCCCCCcccchHHHHHH
Q 016788 39 PLMTPRVIALCKDLFK-QWSKLDDSRFSVDTVSGGITNLLLKVTVKEESG----NDVSVTVRLYGPNTDIVINRQRELQA 113 (382)
Q Consensus 39 ~~~~~~~~~~~~~~~~-~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~----~~~~~vlRi~~~~~~~~idr~~E~~~ 113 (382)
++...++..+|...++ .|.++......++.++||.+|.+|.++.+.... .+.++++|||++..+ +++|..|..+
T Consensus 17 ~~~~~~~~~~~~~~l~~~w~~v~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~-~~~~~~Esv~ 95 (366)
T KOG2686|consen 17 NDILPRAKELCAQYLGGAWRDVINEEQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVD-FSQRETESVM 95 (366)
T ss_pred ccccHHHHHHHHHHhhhHHhhhhhhhheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCcc-HHHhhhHHHH
Confidence 3466888888988877 499988888999999999999999998876542 235799999998766 7799999999
Q ss_pred HHHHHhCCCCceEEEEeCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCC-cchhhHHHHHHHhccC
Q 016788 114 IKYLSAAGFGAKLLAVFGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEP-QLWNDVSKFFEKASSL 192 (382)
Q Consensus 114 l~~l~~~gl~P~~~~~~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p-~~~~~~~~~~~~~~~~ 192 (382)
+..++..|++|+++|.|++|++++||+.|+++.+++++|++...||..|+++|.+.+|.+.+| .+|+++++|+..+...
T Consensus 96 fa~lSer~lGPkL~G~F~~GR~EefipSRtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~~ke~~~~~~~~~~wl~~~~~~ 175 (366)
T KOG2686|consen 96 FAILSERGLGPKLYGFFSGGRFEEFIPSRTLTLADIRDPEISKRIAAKLAEYHGIEVPGPKEPRSLWERYKKWLKGAKKI 175 (366)
T ss_pred HHHHhhcCCCcceeeecCCccHhhhccccccchHhhcchhHHHHHHHHHHHhcCCcCCCCccHHHHHHHHHHHHhhhhhc
Confidence 999999999999999999999999999999999999999999999999999999999998887 7999999999887643
Q ss_pred CCCcHHHhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhh
Q 016788 193 KFDEIEKQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFS 272 (382)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~ 272 (382)
..................+..++..++++.+..+.++||||||++.||||+.++.+.+.+||||||++|+++|||||||+
T Consensus 176 ~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~e~~~~~vvFcHNDlq~gNiL~~~~t~~Lv~IDfEYasyN~r~fDlanHf~ 255 (366)
T KOG2686|consen 176 KPTEVSYSCGPDKLEIEDLLLELSLFRKWSELTKSPVVFCHNDLQYGNILLLNSTKELVLIDFEYASYNPRGFDLANHFC 255 (366)
T ss_pred CCCccchhcccchhhHHHHHHHHHHHHHHHhcCCCCeeeecccccccceeeecCCCceeEEeeccccCCchhhhHHHHHH
Confidence 22111111111222345666777778877755678899999999999999876567899999999999999999999999
Q ss_pred hcCc---------cccCCCCCCCHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhhhhhhhHHHHHHHHhcccC-
Q 016788 273 EYAG---------YDCDYSLYPNKDEQNHFFRHYLRPDKPE--EVSDQDLEVLYVEANTFMLASHLFWALWALIQAKMS- 340 (382)
Q Consensus 273 e~~~---------~~~~~~~~p~~~~~~~fl~~Y~~~~~~~--~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q~~~~- 340 (382)
||+. +..+.+.||.+++++.|+.+|+.+.... +..+.+++.|+.+++.|++++|++|++|+++|+..+
T Consensus 256 E~~~DY~~~~~P~~~~~~~~~p~~e~~~~F~~sYl~~~~~~~~~~~~~ev~~L~~e~~~~~p~shlfW~LWsi~q~~~~~ 335 (366)
T KOG2686|consen 256 EWAADYHTPTPPGLKINPDLYPGEEQRQRFIESYLDSAAVKRKEPREKEVEKLLKEIRFFTPASHLFWGLWSILQALVLH 335 (366)
T ss_pred HhhccccCCCCCeeecchhhCCCcHHHHHHHHHHHHHhhccccCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcc
Confidence 9982 2334467999999999999999765321 456789999999999999999999999999999998
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 016788 341 PIDFDYLGYFFLRYNEYKKQKEMCVSLA 368 (382)
Q Consensus 341 ~~~fdy~~y~~~R~~~y~~~k~~~~~~~ 368 (382)
+++|||+.||..|+..|+..|..+....
T Consensus 336 ~i~fdy~~y~r~rf~~y~~~k~~L~~~~ 363 (366)
T KOG2686|consen 336 KIEFDYMEYARDRFAVYFHLKPRLGAIY 363 (366)
T ss_pred ccccChHHHHHHHHHHHhccchhhcccc
Confidence 8999999999999999999998875443
No 6
>PTZ00384 choline kinase; Provisional
Probab=100.00 E-value=1.2e-53 Score=412.04 Aligned_cols=318 Identities=22% Similarity=0.411 Sum_probs=256.4
Q ss_pred CcchHHHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCC---CeeEEEEEcCCCCCcccchHHHHHHHH
Q 016788 39 PLMTPRVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGN---DVSVTVRLYGPNTDIVINRQRELQAIK 115 (382)
Q Consensus 39 ~~~~~~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~---~~~~vlRi~~~~~~~~idr~~E~~~l~ 115 (382)
+....++..+|++++|+|+.++++.+++++++||+||.+|+|+.+++.+. .+.+++|+++..++.++||++|.++++
T Consensus 28 ~~~~~~~~~~~~~~~p~w~~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~ 107 (383)
T PTZ00384 28 DHSHSNLKSLCIRHVPFWNNVNPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAK 107 (383)
T ss_pred cccHHHHHHHHHHHCCccccCCcccEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHH
Confidence 35668999999999999998888899999999999999999987654211 134889999998899999999999999
Q ss_pred HHHhCCCCceEEEEeCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccC---CCC--CCCcchhhHHHHHHHhc
Q 016788 116 YLSAAGFGAKLLAVFGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEI---PGS--KEPQLWNDVSKFFEKAS 190 (382)
Q Consensus 116 ~l~~~gl~P~~~~~~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~---~~~--~~p~~~~~~~~~~~~~~ 190 (382)
.|++.|++|++++.+++|+|++||+|++++..+++++.+...+|+.|++||+... |.. ..|..|.++..|...+.
T Consensus 108 ~Ls~~glgP~l~~~f~~g~l~efIeGr~l~~~dl~~p~~~~~IA~~La~lH~~~~~~~p~~~~~~p~~~~~i~~w~~~~~ 187 (383)
T PTZ00384 108 LLGDNNFGPKIIGRFGDFTIQEWVEGNTMGIDSLQNLSVLTGIASSLAKFHKRVTELVPKEWDRTPMFLTKISTWSQHVE 187 (383)
T ss_pred HHHhCCCCCeEEEecCCEEEEEEeccccCChhHhcCHHHHHHHHHHHHHHhcccccCCCccccCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999753 221 23556777777776543
Q ss_pred cCCCCcHHHhhcccccCHHHHHHHHHHHHHHhc-------ccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCc
Q 016788 191 SLKFDEIEKQSMYETISFKEVQKEIVELKELAG-------HLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYR 263 (382)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~-------~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~ 263 (382)
... .... ...++..+.+++..+++.+. ....+.||||||++++|||.. ++.+.+||||||++|+|
T Consensus 188 ~~~-----~~~~-~~~~~~~l~~~~~~~~~~L~~~l~~~~~~~~~~VfCHNDL~~gNIL~~--~~~l~lID~EYA~~n~~ 259 (383)
T PTZ00384 188 RII-----KKYN-LDFDYNELVQNYELFKKILNNHLNTSNSITNSVLFCHNDLFFTNILDF--NQGIYFIDFDFAGFNYV 259 (383)
T ss_pred HHH-----Hhhc-cccCHHHHHHHHHHHHHHHHHhhccccccccceeeeeccCCcccEEec--CCCEEEEEeccccCCch
Confidence 210 0000 11234556666666554442 123468999999999999985 46799999999999999
Q ss_pred hhhHHhhhhhcCcc-c--------cCCCCCCCHHHHHHHHHHhcCCCCC--CCCCHHHHHHHHHHHHHhhhhhhhHHHHH
Q 016788 264 GYDIGNHFSEYAGY-D--------CDYSLYPNKDEQNHFFRHYLRPDKP--EEVSDQDLEVLYVEANTFMLASHLFWALW 332 (382)
Q Consensus 264 ~~Dla~~~~e~~~~-~--------~~~~~~p~~~~~~~fl~~Y~~~~~~--~~~~~~e~~~l~~~v~~~~~~~~l~W~lW 332 (382)
+||||++|+||++. . .+++.||+.+++..|++.|++.... ..+++.+++.|+.+|+.|++++|++|++|
T Consensus 260 ~fDLAn~f~E~~~~y~~~~~~~~~~~~~~~ps~e~~~~fi~~Yl~~~~~~~~~~~~~~~~~l~~~v~~~~l~sh~~W~lW 339 (383)
T PTZ00384 260 GWEIANFFVKLYIVYDPPTPPYFNSDDSLALSEEMKTIFVSVYLSQLLGKNVLPSDDLVKEFLQSLEIHTLGVNLFWTYW 339 (383)
T ss_pred HhHHHHHHHHHhcccCCCCCCccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999962 2 3457789999999999999975321 22457889999999999999999999999
Q ss_pred HHHhcccC----CCCcchHHHHHHHHHHHHHHHHHH
Q 016788 333 ALIQAKMS----PIDFDYLGYFFLRYNEYKKQKEMC 364 (382)
Q Consensus 333 a~~q~~~~----~~~fdy~~y~~~R~~~y~~~k~~~ 364 (382)
|++|+..+ ..++||++||..|+++|++..+++
T Consensus 340 ~iIq~~~~~~~~~~~~~f~~y~~~r~~~~~~~~~~~ 375 (383)
T PTZ00384 340 GIVMNDKPKNELSKPVKFEAYAKFQYNLFKNNLRKL 375 (383)
T ss_pred HHHhCCCCcccccCCchHHHHHHHHHHHHHHHHHHh
Confidence 99998732 247788999999999998775544
No 7
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=100.00 E-value=2.8e-44 Score=340.05 Aligned_cols=273 Identities=35% Similarity=0.652 Sum_probs=210.0
Q ss_pred eEEEEecceeeeeEEEEEecCC---CCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCCceEEEeec
Q 016788 64 FSVDTVSGGITNLLLKVTVKEE---SGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGNGMVQSFIN 140 (382)
Q Consensus 64 ~~i~~l~gG~tN~~y~v~~~~~---~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g~i~e~i~ 140 (382)
+++++++||+||.+|+|+..++ ...+.++|+|+++..+...++|.+|.++++.|++.|++|++++.+++|+|++|++
T Consensus 1 ~~i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~~~v~e~i~ 80 (302)
T cd05156 1 LEVSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPNGRIEEFIP 80 (302)
T ss_pred CeEEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCCCchhheeC
Confidence 3689999999999999987652 1112489999999887778999999999999999999999999999999999999
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCC-C----CCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPG-S----KEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEI 215 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~-~----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (382)
|+++...++.++....++|+.|++||+...+. . ..|..|..+..|...............+.........+...+
T Consensus 81 G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (302)
T cd05156 81 SRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLEDE 160 (302)
T ss_pred CCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHHH
Confidence 99988777778889999999999999988653 1 234566666777665442111000000001011122333333
Q ss_pred HHHHHHhcc-----cCCCeeeeccCCCCCceeeeCC---CCCEEEEEeecCCCCCchhhHHhhhhhcC---------ccc
Q 016788 216 VELKELAGH-----LNAPVVFSHNDLLSGNIMVNDE---QEKLYLIDFEYGSYNYRGYDIGNHFSEYA---------GYD 278 (382)
Q Consensus 216 ~~l~~~~~~-----~~~~~vl~H~Dl~~~NiL~~~~---~~~~~lIDfE~a~~~~~~~Dla~~~~e~~---------~~~ 278 (382)
..+.+.+.. ...+.|+||||++++|||++++ ++.+.|||||||++|+|+||||++|+||+ ++.
T Consensus 161 ~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~DlA~~~~e~~~~~~~~~~~~~~ 240 (302)
T cd05156 161 AKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFDIANHFCEWMYDYHDPEPPFFK 240 (302)
T ss_pred HHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHHHHHHHHHHHHhhcCCCCCCccc
Confidence 333333322 2478899999999999999752 26799999999999999999999999987 345
Q ss_pred cCCCCCCCHHHHHHHHHHhcCCCCC----CCCCHHHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 016788 279 CDYSLYPNKDEQNHFFRHYLRPDKP----EEVSDQDLEVLYVEANTFMLASHLFWALWALIQ 336 (382)
Q Consensus 279 ~~~~~~p~~~~~~~fl~~Y~~~~~~----~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q 336 (382)
++++.||+.+++..|++.|++.... .+.+..+++.++.+|..|.+++|++|++||++|
T Consensus 241 ~~~~~~p~~~~~~~f~~~Yl~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~W~lW~~~q 302 (302)
T cd05156 241 IHEDKYPTEEQRLNFISAYLSESLKGKNSVEEREKEVKDLLEEVEIFTPASHLFWALWGIIQ 302 (302)
T ss_pred cChhhCcCHHHHHHHHhccCchhcccccccCcHHHHHHHHHHHHHHHHhhhhHHHHHHHhcC
Confidence 6778899988999999999986421 234567889999999999999999999999997
No 8
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=100.00 E-value=1.7e-37 Score=283.19 Aligned_cols=228 Identities=47% Similarity=0.845 Sum_probs=182.9
Q ss_pred eEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCCceEEEeecCCc
Q 016788 64 FSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGNGMVQSFINART 143 (382)
Q Consensus 64 ~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g~i~e~i~G~~ 143 (382)
+++++++||+||.+|+|+..++ +..+||+|++++.+...+||++|..+++.|++.|++|++++.+++|+|++|++|++
T Consensus 1 ~~i~~l~gG~tN~~~~v~~~~~--~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~~~l~e~i~G~~ 78 (235)
T cd05157 1 ITFKRFTGGITNKLVKVSNKED--NQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQNGLIYEFIPGRT 78 (235)
T ss_pred CeEEEcCCcccceEEEEEcCCC--CCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeCCcEEEEeeCCCc
Confidence 4689999999999999987641 01379999999887778999999999999999999999999888899999999999
Q ss_pred CCccccCChHHHHHHHHHHHHHhcccCCCC------CCCcchhhHHHHHHHhccCCCCcHHHh-hcccccCHHHHHHHHH
Q 016788 144 LTPADMRNPKLAAEIAKQLRRFHQVEIPGS------KEPQLWNDVSKFFEKASSLKFDEIEKQ-SMYETISFKEVQKEIV 216 (382)
Q Consensus 144 l~~~~~~~~~~~~~ia~~La~lH~~~~~~~------~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ 216 (382)
++..++.++....++|+.|++||+...+.. ..+..|+.+..|+...... .....+. ..........+.+.+.
T Consensus 79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~ 157 (235)
T cd05157 79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTE-FKKPEKFQKKTKAISFEQLRDEIS 157 (235)
T ss_pred CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHh-hccccchhhhhccccHHHHHHHHH
Confidence 988888888889999999999999886542 2345677777887665421 0000000 0001123456666677
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHH
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFF 294 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl 294 (382)
++.+.+.....+.++||||++++|||++++++.+.|||||||++|+|+||||++++||++++++...||+.+++..|+
T Consensus 158 ~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~ 235 (235)
T cd05157 158 WLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRAFDIANHFNEWAGFDCDYYLYPPKEEQQAFI 235 (235)
T ss_pred HHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCchheeHHHHHHHHcCccCChhhCcCHHHHHhhC
Confidence 777776655578899999999999999853467999999999999999999999999999999999999999888874
No 9
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=100.00 E-value=6.3e-36 Score=276.39 Aligned_cols=249 Identities=20% Similarity=0.283 Sum_probs=189.4
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcc-cchHHHHHHHHHHHhCCCCceEEEEeCCceEEEeecCCcCC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIV-INRQRELQAIKYLSAAGFGAKLLAVFGNGMVQSFINARTLT 145 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~-idr~~E~~~l~~l~~~gl~P~~~~~~~~g~i~e~i~G~~l~ 145 (382)
.+++||+||.+|+++..++ ++|+|++++....+ +||++|..+++.+++.|++|++++.+++++|++||+|++++
T Consensus 2 ~~~~~G~tn~~y~~~~~~~-----~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~~~~v~e~i~G~~~~ 76 (256)
T TIGR02721 2 QTLSGGLTNRSWRIEHPGI-----SFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNEHWLLVEWLEGEVIT 76 (256)
T ss_pred CcCCCcCcCCeEEEEeCCc-----cEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeCCEEEEEeccCcccc
Confidence 4688999999999986543 79999998766554 79999999999999999999999999999999999999998
Q ss_pred ccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhccc
Q 016788 146 PADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAGHL 225 (382)
Q Consensus 146 ~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 225 (382)
..++.++....++|+.|++||+++.+... ...+..+..|..++.... . ...+...+..+.......
T Consensus 77 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~-~~~~~~~~~~~~~l~~~~---------~----~~~~~~~~~~~~~~~~~~ 142 (256)
T TIGR02721 77 LDQFVALDLLLELAALLHQLHSQPRFGYP-LSLKARIAHYWLQIDPAR---------R----TPEWLRLYKQFRSAPEPA 142 (256)
T ss_pred cccccCchhHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHHhccccc---------C----ChHHHHHHHHHHhccCCC
Confidence 77666778899999999999999865321 233445556655443110 0 112222233333222223
Q ss_pred CCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHHHHhcCCCCCCC
Q 016788 226 NAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRHYLRPDKPEE 305 (382)
Q Consensus 226 ~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~~~~~~ 305 (382)
+.+.++||||++++|||+++ +.++|||||||++|||++|||+++.++ +.+++..|++.|++....
T Consensus 143 ~~~~~l~H~Dl~~~Nil~~~--~~~~lIDwE~a~~gdp~~DLa~~~~~~-----------~~~~~~~~l~~Y~~~~~~-- 207 (256)
T TIGR02721 143 PLPLAPLHMDVHAYNLVVTP--QGLKLIDWEYASDGDIALELAAIIRAN-----------DEEQQQDFVQRYCQRRRI-- 207 (256)
T ss_pred CCCCeeecCCCCcCcEEEeC--CCCEEEeccccCcCCHHHHHHHHHHhC-----------CHHHHHHHHHHHHHhhCC--
Confidence 56789999999999999974 348999999999999999999998763 457789999999975321
Q ss_pred CCHHHHHHHHHHHHHhhhhhhhHHHHHHHHhcccCCCCcchHHHHHHH
Q 016788 306 VSDQDLEVLYVEANTFMLASHLFWALWALIQAKMSPIDFDYLGYFFLR 353 (382)
Q Consensus 306 ~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q~~~~~~~fdy~~y~~~R 353 (382)
.....++.+++.|.++++++|++|+.++...++ +-.|..-|...
T Consensus 208 ---~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~a~~~ 251 (256)
T TIGR02721 208 ---YSISVLWRQVKAWQPWVDYMAALWFELRWQQTG-DPQFLELAQEL 251 (256)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHH
Confidence 122567788999999999999999999988765 44555544433
No 10
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=100.00 E-value=1.4e-36 Score=272.65 Aligned_cols=199 Identities=42% Similarity=0.780 Sum_probs=149.2
Q ss_pred eeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhccc
Q 016788 90 VSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVE 169 (382)
Q Consensus 90 ~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~ 169 (382)
++||||+||.+++.++||..|..+++.|++.|++|++++.+++|+|++||+|++++..++.++.+...+|+.|++||+.+
T Consensus 3 ~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g~~p~~~~~~~~g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~~lH~~~ 82 (211)
T PF01633_consen 3 EKYLVRIPGEGTENFIDRENENEALKLLSEAGLGPKIIYFFENGRVEEFIEGRTLSPEDFRNPEILKRIAKLLAKLHSIP 82 (211)
T ss_dssp SEEEEEEEESCGCSHHHHHHHHHHHHHHHHTTSSS-EEEEETTEEEEE--SSEE--CGGGGSHHHHHHHHHHHHHHHTHH
T ss_pred CEEEEEeCCCCcccccCHHHHHHHHHHHHHcCCCCeEEEEcCCCcEEEEecccccChhhccChHHHHHHHHHHHHHhhcc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C-CCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCC
Q 016788 170 I-PGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQE 248 (382)
Q Consensus 170 ~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~ 248 (382)
. +....+.+|..+..|......................+..+.+++.++++.+.....+.|+||||++++|||+++.++
T Consensus 83 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~~~Nil~~~~~~ 162 (211)
T PF01633_consen 83 ISPNSKKPDLWDRIDKYMNKKSEFLFKRKKKKKSIDKEDLEDLQEELEELEKLLEKSNSPLVFCHNDLNPGNILINNKDG 162 (211)
T ss_dssp HTTSSSS-HHHHHHHHHHHHHHTCCCCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSCGGEEEE-S--SGGGEEETSSSS
T ss_pred cccccCcchHHHHhhhhccchhhhhhhhhhhccccccCCHHHHHHHHhhhhhhhhccCCCceEeeccCccccEEeccCCC
Confidence 8 444556789988888322221111111111111122356677888888888766778899999999999999933468
Q ss_pred CEEEEEeecCCCCCchhhHHhhhhhcCc--------cccCCCCCCCHH
Q 016788 249 KLYLIDFEYGSYNYRGYDIGNHFSEYAG--------YDCDYSLYPNKD 288 (382)
Q Consensus 249 ~~~lIDfE~a~~~~~~~Dla~~~~e~~~--------~~~~~~~~p~~~ 288 (382)
.+.|||||||++|+|+||||++|++++. +.++++.||+++
T Consensus 163 ~~~lIDfEya~~n~~~fDia~~f~e~~~~~~~~~~~~~~~~~~yp~~~ 210 (211)
T PF01633_consen 163 EVKLIDFEYAGYNDRAFDIANFFCEWNFDYEQEEFFFKCDYSKYPTEE 210 (211)
T ss_dssp CEEE--GTT-EEEEHHHHHHHHHHHTTEETTHSSTSTEE-GGGS--HH
T ss_pred eEEEecHHHHhhccchhhHHHHHHHHcCchhhhhhhhhhhHhhCCCcc
Confidence 8999999999999999999999999985 567778888765
No 11
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.94 E-value=9.1e-26 Score=194.94 Aligned_cols=165 Identities=32% Similarity=0.578 Sum_probs=139.6
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeC--CceEEEeecCC
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFG--NGMVQSFINAR 142 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g~i~e~i~G~ 142 (382)
.+++++||.+|.+|+++..++ ++++|++.+......+++.|+.+++.+++.++.|+++..+. .++|++|++|+
T Consensus 2 ~~~~l~~G~~~~vy~~~~~~~-----~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~ 76 (170)
T cd05151 2 HISPLKGGMTNKNYRVEVANK-----KYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGS 76 (170)
T ss_pred ceeecCCcccCceEEEEECCe-----EEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCC
Confidence 578999999999999998754 79999997765455688999999999999999999998875 45899999998
Q ss_pred cCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHh
Q 016788 143 TLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELA 222 (382)
Q Consensus 143 ~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 222 (382)
++...+...+....++++.|++||....+
T Consensus 77 ~l~~~~~~~~~~~~~l~~~l~~LH~~~~~--------------------------------------------------- 105 (170)
T cd05151 77 ELLTEDFSDPENLEKIAKLLKKLHSSPLP--------------------------------------------------- 105 (170)
T ss_pred ccccccccCHHHHHHHHHHHHHHhCCCCC---------------------------------------------------
Confidence 88754445667788999999999986532
Q ss_pred cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHHHHhcCCC
Q 016788 223 GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRHYLRPD 301 (382)
Q Consensus 223 ~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~~ 301 (382)
+.++||||++++|||++ ++.+.+||||++++++|++|||.++.++. .+++.+..|++.|.+..
T Consensus 106 -----~~~~~HgD~~~~Nil~~--~~~~~liDf~~a~~~~~~~Dla~~~~~~~---------~~~~~~~~~~~~y~~~~ 168 (170)
T cd05151 106 -----DLVPCHNDLLPGNFLLD--DGRLWLIDWEYAGMNDPLFDLANFFSEAK---------LSEDQEEELLEAYFGRE 168 (170)
T ss_pred -----CceeecCCCCcCcEEEE--CCeEEEEecccccCCChHHHHHHHHHhcC---------CCHHHHHHHHHHHhCCC
Confidence 56999999999999997 46799999999999999999999988753 24567899999998753
No 12
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=99.94 E-value=2.9e-25 Score=209.44 Aligned_cols=248 Identities=16% Similarity=0.190 Sum_probs=161.6
Q ss_pred CeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC-ceEEEEeC-------Cc-
Q 016788 63 RFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG-AKLLAVFG-------NG- 133 (382)
Q Consensus 63 ~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~-P~~~~~~~-------~g- 133 (382)
..+++++.+|.+|.+|+|.+.++ ++|+|++++.+ ..+...|..+++.|++.|++ |+++...+ +|
T Consensus 16 ~~~i~~i~~G~~n~~y~v~~~~~-----~~vLr~~~~~~--~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~ 88 (296)
T cd05153 16 LLSFEGISAGIENTNYFVTTDSG-----RYVLTLFEKVS--AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGK 88 (296)
T ss_pred hhheecccCccccceEEEEeCCC-----cEEEEEcCCCC--hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCc
Confidence 45789999999999999988765 69999987632 22456899999999999985 88876421 12
Q ss_pred --eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHH
Q 016788 134 --MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEV 211 (382)
Q Consensus 134 --~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 211 (382)
.|++|++|++++. .++....++|+.|++||........... ......|....... .. ..+.......+
T Consensus 89 ~~~l~~~i~G~~~~~---~~~~~~~~lg~~La~lH~~~~~~~~~~~-~~~~~~~~~~~~~~-~~-----~~l~~~~~~~~ 158 (296)
T cd05153 89 PAALVEFLAGEHLTR---PTAAHCRQIGEALARLHLAAQSFPGERN-NLRGLAWIRELGKD-LL-----PLLSAEDRALL 158 (296)
T ss_pred eEEEEEeCCCCCCCC---CCHHHHHHHHHHHHHHHHHhccCCccCC-CcCCcHHHHHHHHH-hc-----cccCHHHHHHH
Confidence 5899999998765 2467789999999999997643211100 00112233221110 00 00000001223
Q ss_pred HHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHH
Q 016788 212 QKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQN 291 (382)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~ 291 (382)
...+..+.+. .....+.++||||++++|||+++ ++.++|||||+|++|++.+|||.++..|+.. .+.. .+.+...
T Consensus 159 ~~~~~~l~~~-~~~~~~~~l~HgD~~~~Nil~~~-~~~~~iIDfe~a~~g~~~~Dla~~~~~~~~~-~~~~--~~~~~~~ 233 (296)
T cd05153 159 ADELARQDAF-DPSDLPRGVIHADLFRDNVLFDG-DELSGVIDFYFACTDAFLYDLAITLNDWCFD-EDGA--LDPERAQ 233 (296)
T ss_pred HHHHHHHHhh-hhhcCCCcCCccCcCcccEEEeC-CceEEEeehhhhcCchHHHHHHHHHHHHHhC-ccCC--CCHHHHH
Confidence 3334444432 22345679999999999999985 4557999999999999999999998876521 1111 2456789
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHHHHHHhccc
Q 016788 292 HFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLFWALWALIQAKM 339 (382)
Q Consensus 292 ~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q~~~ 339 (382)
.|+++|.+.. + .+..++..|+ .+..+..+.+.+|.+.-...
T Consensus 234 ~~l~gY~~~~-~--ls~~e~~~l~----~~~~~~a~~~~~~~~~~~~~ 274 (296)
T cd05153 234 ALLAGYQAVR-P--LTEAERAALP----IMLRGAALRFWLSRLYDFHF 274 (296)
T ss_pred HHHHHHHhcC-C--CCHHHHHHHH----HHHHHHHHHHHHHHHHHhhc
Confidence 9999998753 3 5677777766 33444444545555544433
No 13
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=99.93 E-value=4.9e-25 Score=199.30 Aligned_cols=196 Identities=18% Similarity=0.268 Sum_probs=137.0
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC-ceEEEEeCC----ceEEEeecC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG-AKLLAVFGN----GMVQSFINA 141 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~-P~~~~~~~~----g~i~e~i~G 141 (382)
++|++|.||.+|+.. ++ ++|+|++.+... ..+..+|+++++.|...|++ |+++...+. |+|++||+|
T Consensus 7 ~~i~~G~t~~~y~~~--~~-----~~VlR~~~~~~~-~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 7 TQTGEGGNGESYTHK--TG-----KWMLKLYNPGFD-KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred eeecCCCCcceeEec--CC-----CEEEEeCCCCCC-HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence 688999999999842 22 699999987542 23468999999999999994 999988643 589999999
Q ss_pred Cc-C----CccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 142 RT-L----TPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 142 ~~-l----~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
.+ + .......+.+...+|+.|++||+++.+....+..+..+..+++... .. ...+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~---~~------------~~~~~~~-- 141 (226)
T TIGR02172 79 KRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKD---FV------------PKDYKEK-- 141 (226)
T ss_pred ccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhcc---CC------------CHHHHHH--
Confidence 74 2 2111122457889999999999987665433333443434333221 00 1112222
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHHHH
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRH 296 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~ 296 (382)
+.+++...+.+.++||||+|++|||+++ ++ ++|||||++++|||.+|||.++.-+. + ..+++..|+..
T Consensus 142 -l~~~l~~~~~~~~~~HgD~~~~Nii~~~-~~-~~iIDwe~a~~Gdp~~Dla~~~~~~~-~--------~~~~~~~~~~~ 209 (226)
T TIGR02172 142 -ARAFIKEVPDTSTCLHGDFQIGNLITSG-KG-TYWIDLGDFGYGNPLFDLGLLFMFCH-Y--------LDDDKLQAIFH 209 (226)
T ss_pred -HHHHHHhCCCCCceEecCCCCCcEEEcC-CC-cEEEechhcCcCCHHHHHHHHHHhcc-C--------ChhHHHHHHHh
Confidence 2223323355568899999999999975 44 99999999999999999999765321 1 34678899999
Q ss_pred hcC
Q 016788 297 YLR 299 (382)
Q Consensus 297 Y~~ 299 (382)
|+.
T Consensus 210 y~~ 212 (226)
T TIGR02172 210 MNA 212 (226)
T ss_pred cCH
Confidence 985
No 14
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.91 E-value=3.2e-23 Score=186.48 Aligned_cols=194 Identities=19% Similarity=0.226 Sum_probs=137.3
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCC-CceEEEEeCC-------ce
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGF-GAKLLAVFGN-------GM 134 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl-~P~~~~~~~~-------g~ 134 (382)
+++++++|.+|.+|+|+..++ .++++|++..... ...+...|..+++.++..|+ .|+++..... .+
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~g----~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~ 77 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGGG----RRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFY 77 (223)
T ss_pred cceecCCCccceEEEEEecCC----cceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceE
Confidence 568899999999999998763 2799999876543 34467899999999999888 5999987643 26
Q ss_pred EEEeecCCcCCcccc---CC----hHHHHHHHHHHHHHhcccCCCCCCC-------cchhhHHHHHHHhccCCCCcHHHh
Q 016788 135 VQSFINARTLTPADM---RN----PKLAAEIAKQLRRFHQVEIPGSKEP-------QLWNDVSKFFEKASSLKFDEIEKQ 200 (382)
Q Consensus 135 i~e~i~G~~l~~~~~---~~----~~~~~~ia~~La~lH~~~~~~~~~p-------~~~~~~~~~~~~~~~~~~~~~~~~ 200 (382)
|++|++|.++..... .+ ..++.++|+.|++||+.+.+....+ .....+..|.+.+....
T Consensus 78 v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 150 (223)
T cd05154 78 VMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASR------- 150 (223)
T ss_pred EEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhc-------
Confidence 999999988765432 12 2567899999999999875422111 12233444444432110
Q ss_pred hcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCC-CCCEEEEEeecCCCCCchhhHHhhhhhc
Q 016788 201 SMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDE-QEKLYLIDFEYGSYNYRGYDIGNHFSEY 274 (382)
Q Consensus 201 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~-~~~~~lIDfE~a~~~~~~~Dla~~~~e~ 274 (382)
......+...+.++.+... ...+.++||||++++|||++++ ++.++|||||++++|+|++|||.++..|
T Consensus 151 ----~~~~~~~~~~~~~~~~~~~-~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~~~Dla~~~~~~ 220 (223)
T cd05154 151 ----TDEPPAMERLLRWLEAHLP-ADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDPLADLGWLLMYW 220 (223)
T ss_pred ----ccccHHHHHHHHHHHhhCC-CCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCChHHHHHHHHHhc
Confidence 0011233344444544432 2357899999999999999753 3558999999999999999999998765
No 15
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=99.91 E-value=1.9e-23 Score=193.01 Aligned_cols=243 Identities=25% Similarity=0.373 Sum_probs=157.8
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEE----eCCceEEEee-
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAV----FGNGMVQSFI- 139 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~----~~~g~i~e~i- 139 (382)
.+.++. |.||.+|++...+. +.++.|.+++....++.+..+ |+++.. ..++++.+++
T Consensus 10 ~~~~~~-g~t~~~~~~~~~g~----~~~~~r~~~p~~~~~~~~~~~-------------~~l~~~~~~~~~~~~~~q~~~ 71 (269)
T COG0510 10 KITPLN-GLTGYAFRIEGEGT----RVFLKRNFEPFLPALIFRLIV-------------PKLLWLKRIANGGVLVAQYWE 71 (269)
T ss_pred eeeecc-CCcceeEEeeCCCC----eeeeecCCCcchHHHHHHhhh-------------hhhhhhcccccCCceEEeeec
Confidence 456665 89999999955544 245556666654333322222 222222 2233666655
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCC---cchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEP---QLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
.|++++.+++ ...++|..|+++|.........| ..+..+..+++.+... .. .. ......+.+.+.
T Consensus 72 ~~~~l~~~~~----~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~-~~-----~~~~~~~~~~~~ 139 (269)
T COG0510 72 NGRTLTPEDM----NLKKIAHILKKLHNSVPLLHQLPRSGSSFIEPKDYLELLWQQ--NS-RA-----YRDNHLLRKKLK 139 (269)
T ss_pred cccccCcccc----chHHHHHHHHHhcCccchHHHHHhhcchHhhHHHHHHHHHhh--ch-HH-----hhhhHHHHHHHH
Confidence 6788887632 36788899999999543221111 1234455666555321 00 00 012456677777
Q ss_pred HHHHHhcccCCC-eeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHHH
Q 016788 217 ELKELAGHLNAP-VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFR 295 (382)
Q Consensus 217 ~l~~~~~~~~~~-~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~ 295 (382)
.++..+...+.+ .|+||||++++|+|.++ .+.+.||||||||+|||+||||+++.++. ++..+......
T Consensus 140 ~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~-~~~l~LIDWEyAg~~D~~~DLA~~~~e~~---------~~~~~~~~~~~ 209 (269)
T COG0510 140 ELRRALEEVPKDDLVPCHNDLNPGNLLLTD-KGGLFLIDWEYAGLNDPAFDLAALLSEYI---------FNHNELEDLYS 209 (269)
T ss_pred HHHHHhhhcCCCceeeecCCCCccceEEcC-CCcEEEEecccCCCccHHHHHHHHHHHhc---------cchhHHHHHHH
Confidence 888877766666 89999999999999974 48899999999999999999999999975 12223445666
Q ss_pred HhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHHHHHHhcccCCCCcchHHHHHHHHHHHHHHHH
Q 016788 296 HYLRPDKPEEVSDQDLEVLYVEANTFMLASHLFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQKE 362 (382)
Q Consensus 296 ~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q~~~~~~~fdy~~y~~~R~~~y~~~k~ 362 (382)
.|+.... . +. |..+.++..+.|.+|+.+|...+ .++..|+..|+.+..+..+
T Consensus 210 ~~~~~~~-~-----~~------~~~~~i~~~~~W~l~~~~~~~~~---~~~~~~~~k~~~~~~~~l~ 261 (269)
T COG0510 210 AYLEKYG-F-----EA------VLIYKILQKFLWYLWTKLQEQIL---EDFGWYDKKRLNRAIDLLE 261 (269)
T ss_pred HHHHhCC-c-----hh------hHHHHHHHHhHHHHHHHHHHHhh---hhhhhhhHHHHHHHHHHHH
Confidence 6665431 1 10 34678899999999999997764 5666777777766544433
No 16
>PRK05231 homoserine kinase; Provisional
Probab=99.90 E-value=6.4e-22 Score=188.68 Aligned_cols=226 Identities=16% Similarity=0.177 Sum_probs=146.6
Q ss_pred CeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC-ceEEEEeC-------Cc-
Q 016788 63 RFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG-AKLLAVFG-------NG- 133 (382)
Q Consensus 63 ~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~-P~~~~~~~-------~g- 133 (382)
..+++++.+|..|.+|+|++.++ ++|+|++...+. -....|..+++.|++.|++ |+++.... +|
T Consensus 24 ~~~~~~l~~G~~n~~y~v~t~~g-----~~vLK~~~~~~~--~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~ 96 (319)
T PRK05231 24 LLSLKGIAEGIENSNFFLTTTQG-----EYVLTLFERLTA--EDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGK 96 (319)
T ss_pred hhccchhccccccceEEEEeCCC-----cEEEEEeccCCh--HHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCE
Confidence 45678899999999999998766 699999862111 1335688899999999985 88885321 23
Q ss_pred --eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCC---CCcchhhHHHHHHHhccCCCCcHHHhhcccccCH
Q 016788 134 --MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSK---EPQLWNDVSKFFEKASSLKFDEIEKQSMYETISF 208 (382)
Q Consensus 134 --~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (382)
.|++|++|+.+... ++....++|+.|++||........ .+..+..+...+.+... ..... ..
T Consensus 97 ~~~l~~~l~G~~~~~~---~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------~~ 163 (319)
T PRK05231 97 PAAIVTFLEGKWPRAP---TAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLP--FLADE--------QA 163 (319)
T ss_pred EEEEEEecCCCCCCCC---CHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhh--ccChh--------HH
Confidence 58999999876432 456678999999999997642211 11111111111111110 00000 01
Q ss_pred HHHHHHHHHHHHHhc---ccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCC
Q 016788 209 KEVQKEIVELKELAG---HLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYP 285 (382)
Q Consensus 209 ~~l~~~~~~l~~~~~---~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p 285 (382)
..+.+.+..+.+.+. ....+.++||||++++|||+++ ++.++||||++|++|++.+|||..+..|+.- .+ ..+
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~-~~~~~iIDf~~~~~~~~~~DlA~~~~~~~~~-~~-~~~- 239 (319)
T PRK05231 164 ALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEG-DRLSGFIDFYFACNDKLLYDVAITLNDWCFE-AD-GSL- 239 (319)
T ss_pred HHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEEC-CceEEEEecccccCCchHHHHHHHHHHHHcc-CC-CCc-
Confidence 122233333333322 1225779999999999999974 4556999999999999999999998877621 11 112
Q ss_pred CHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 016788 286 NKDEQNHFFRHYLRPDKPEEVSDQDLEVLY 315 (382)
Q Consensus 286 ~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~ 315 (382)
+.+....|+++|.+.. | ++..|+..|.
T Consensus 240 ~~~~~~~~l~gY~~~~-~--Ls~~E~~~l~ 266 (319)
T PRK05231 240 DATKARALLAAYQSVR-P--LTAAERAALP 266 (319)
T ss_pred CHHHHHHHHHHHhhcC-C--CCHHHHHHHH
Confidence 4467889999998753 3 6777877665
No 17
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=99.90 E-value=2.4e-22 Score=184.28 Aligned_cols=216 Identities=13% Similarity=0.140 Sum_probs=140.2
Q ss_pred EEEecceee-eeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCC----ceEEEeec
Q 016788 66 VDTVSGGIT-NLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGN----GMVQSFIN 140 (382)
Q Consensus 66 i~~l~gG~t-N~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~----g~i~e~i~ 140 (382)
..+|++|.+ |.+|+++..++ ++++|+..... ..++.+|+++++.|++....|++++..+. .+|++|++
T Consensus 3 ~~~~~~g~~~~~v~~~~~~~~-----~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~ 75 (244)
T cd05150 3 WERVTEGQSGATVYRLDGKNP-----GLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVP 75 (244)
T ss_pred ceecCCCCCcCeEEEEcCCCC-----cEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeC
Confidence 457766654 99999987653 79999986643 23567999999999988667999988642 37999999
Q ss_pred CCcCCccc--cCChHHHHHHHHHHHHHhcccCCCCCCCcch-hhHHHHHHHhccCCCCcHHHhhccccc-CHHHHHHHHH
Q 016788 141 ARTLTPAD--MRNPKLAAEIAKQLRRFHQVEIPGSKEPQLW-NDVSKFFEKASSLKFDEIEKQSMYETI-SFKEVQKEIV 216 (382)
Q Consensus 141 G~~l~~~~--~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~ 216 (382)
|+++.... ...+.+..++|+.|++||+++.+.......+ ..+..+...... ..... ..+... ....+.+...
T Consensus 76 G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~ 151 (244)
T cd05150 76 GVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVEN-GLVDE---DDFDDERRGWSAEELYA 151 (244)
T ss_pred CccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhc-CCcCh---hhCcHhhcCCCHHHHHH
Confidence 99886443 2345678999999999999875432111111 111111111110 00000 000000 0011223334
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHHHH
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRH 296 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~ 296 (382)
+|..... ...+++|||||++++|||+++ ++.++|||||+|++|||.+|||.++.... ..+..++.+..|+++
T Consensus 152 ~l~~~~~-~~~~~~l~HgD~~~~Nil~~~-~~~~~iIDwe~a~~gdp~~Dla~~~~~~~------~~~~~~~~~~~f~~~ 223 (244)
T cd05150 152 ELEATRP-AEEDLVVTHGDACLPNIIVDP-GKFSGFIDLGRLGVADRYQDLALAVRSLR------ENLGGEEYAARFLDR 223 (244)
T ss_pred HHHhhCC-CcCceEEECCCCCCccEEEeC-CcEEEEEEccccccccHHHHHHHHHHHhh------hhcCChHHHHHHHHH
Confidence 4444332 346789999999999999985 56678999999999999999999775421 111145678999999
Q ss_pred hcCC
Q 016788 297 YLRP 300 (382)
Q Consensus 297 Y~~~ 300 (382)
|...
T Consensus 224 Y~~~ 227 (244)
T cd05150 224 YGID 227 (244)
T ss_pred cCCC
Confidence 9653
No 18
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=99.90 E-value=8e-22 Score=187.00 Aligned_cols=233 Identities=15% Similarity=0.198 Sum_probs=149.6
Q ss_pred CCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC-ceEEEEeC-------Cc
Q 016788 62 SRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG-AKLLAVFG-------NG 133 (382)
Q Consensus 62 ~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~-P~~~~~~~-------~g 133 (382)
....++++.+|.+|.+|+|++.++ ++|+|++.+... .-....|.++++.|.+.|++ |+++.... +|
T Consensus 23 ~~~~i~~~~~G~~n~~y~v~t~~~-----~~vLK~~~~~~~-~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g 96 (307)
T TIGR00938 23 ELLSLKGIAEGVENSNYLLTTDVG-----RYILTLYEKRVK-AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAG 96 (307)
T ss_pred CceeccccCCccccceEEEEeCCC-----cEEEEEecCCCC-HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCC
Confidence 356789999999999999988665 699999865321 11335788899999999984 88886432 23
Q ss_pred ---eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHH
Q 016788 134 ---MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKE 210 (382)
Q Consensus 134 ---~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (382)
.|++|++|+++... ++....++|+.|++||.........+........|....... .. ....+.......
T Consensus 97 ~~~~l~e~i~G~~~~~~---~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~-~~---~~~~l~~~~~~~ 169 (307)
T TIGR00938 97 KPACLVEFLQGLSVGRP---TAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKC-FE---AAPQLEAHMGAE 169 (307)
T ss_pred eEEEEEEeCCCCCCCCC---CHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhh-hh---cccccCHHHHHH
Confidence 58999999887542 355689999999999997542211110000112232211100 00 000000000122
Q ss_pred HHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHH
Q 016788 211 VQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQ 290 (382)
Q Consensus 211 l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~ 290 (382)
+.+.++.+.... ....+.++||||++++||++++ ++.++|||||++++|++.+|||.++..|+... ...+ +.+..
T Consensus 170 l~~~~~~l~~~~-~~~~~~~l~HgD~~~~Nvl~~~-~~~~~vIDfd~~~~~~~~~DLA~~~~~~~~~~--~~~~-~~~~~ 244 (307)
T TIGR00938 170 LDKELDYLDKFW-PRDLPRGVIHADLFPDNVLFDG-DSVKGVIDFYFACTDARAYDLAITVNAWCFDA--DDHF-DADHA 244 (307)
T ss_pred HHHHHHHHHhhh-hhcCCCccCCCCCCcCcEEEEC-CceEEEeecccccCcchHHHHHHHHHHHHcCC--CCCC-CHHHH
Confidence 333344443322 2345789999999999999985 45569999999999999999999876665211 1112 34578
Q ss_pred HHHHHHhcCCCCCCCCCHHHHHHHH
Q 016788 291 NHFFRHYLRPDKPEEVSDQDLEVLY 315 (382)
Q Consensus 291 ~~fl~~Y~~~~~~~~~~~~e~~~l~ 315 (382)
..|+++|.+.. .++..|++.|.
T Consensus 245 ~~~l~gY~~~~---~Ls~~e~~~l~ 266 (307)
T TIGR00938 245 KALIKGYHQSR---PLTEEEKAAFP 266 (307)
T ss_pred HHHHHHHHhcC---CCCHHHHHHHH
Confidence 89999998663 35677776665
No 19
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=99.88 E-value=1.5e-21 Score=178.12 Aligned_cols=203 Identities=19% Similarity=0.248 Sum_probs=130.9
Q ss_pred EEEe-cceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhC-CCC-ceEEEEeCC-------ceE
Q 016788 66 VDTV-SGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAA-GFG-AKLLAVFGN-------GMV 135 (382)
Q Consensus 66 i~~l-~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~-gl~-P~~~~~~~~-------g~i 135 (382)
|+++ +||.+|.+|++. . .+|+|++.... ...+..+|.++++.|++. +++ |+++...+. ..|
T Consensus 2 ~~~~~~gG~~n~vy~~~---~-----~~VlR~~~~~~-~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l 72 (235)
T cd05155 2 IEPVDSGGTDNATFRLG---D-----DMSVRLPSAAG-YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSV 72 (235)
T ss_pred ceeccCCCcccceEEcC---C-----ceEEEcCCccc-hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEE
Confidence 3556 489999999983 2 59999987632 223678999999999875 664 898876432 259
Q ss_pred EEeecCCcCCccccCCh-HHHHHHHHHHHHHhcccCCCCCC---Ccchh--hHHHHHHHhccCCCCcHHHhhccc-ccCH
Q 016788 136 QSFINARTLTPADMRNP-KLAAEIAKQLRRFHQVEIPGSKE---PQLWN--DVSKFFEKASSLKFDEIEKQSMYE-TISF 208 (382)
Q Consensus 136 ~e~i~G~~l~~~~~~~~-~~~~~ia~~La~lH~~~~~~~~~---p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 208 (382)
++|++|+++....+.++ .+..++|+.|++||+++.+.... +..+. ....|...... ....+. ....
T Consensus 73 ~~~i~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~ 145 (235)
T cd05155 73 YRWLEGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETRE-------AIEALEGVIDV 145 (235)
T ss_pred EEeecCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHH-------HHHHcccccCh
Confidence 99999999876655443 57889999999999987653211 11110 01111111100 000000 0111
Q ss_pred HHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHH
Q 016788 209 KEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKD 288 (382)
Q Consensus 209 ~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~ 288 (382)
..+.+.++.+.+. ....+.+|||||++++|||+++ ++.++||||++|++|||++|||.....+ ...
T Consensus 146 ~~~~~~~~~~~~~--~~~~~~~l~HGD~~~~Nvlv~~-~~i~giIDw~~a~~gDp~~Dla~~~~~~-----------~~~ 211 (235)
T cd05155 146 DAARALWEAALRA--PWWGPPVWFHGDLAPGNLLVQD-GRLSAVIDFGCLGVGDPACDLAIAWTLL-----------DED 211 (235)
T ss_pred HHHHHHHHHHhcc--cccCCceEEeCCCCCCcEEEEC-CCEEEEEeCcccCcCChHHHHHHHHhcC-----------CHH
Confidence 1122222211111 1236789999999999999974 4556899999999999999999764421 335
Q ss_pred HHHHHHHHhc
Q 016788 289 EQNHFFRHYL 298 (382)
Q Consensus 289 ~~~~fl~~Y~ 298 (382)
.+..|++.|.
T Consensus 212 ~~~~~~~~y~ 221 (235)
T cd05155 212 SRAAFRAALG 221 (235)
T ss_pred HHHHHHHHcC
Confidence 6789999998
No 20
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=99.87 E-value=2.8e-22 Score=181.61 Aligned_cols=216 Identities=25% Similarity=0.438 Sum_probs=134.3
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCC-CceEEEEeC----Cc---eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGF-GAKLLAVFG----NG---MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl-~P~~~~~~~----~g---~i~ 136 (382)
+|+++++|.+|.+|+|+..++ ++|+|++.+. ........|..+++.|++.|+ .|+++.... .+ .++
T Consensus 1 ~i~~l~~G~~n~~~~v~~~~~-----~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 1 HIRPLSGGFSNRVYRVTTDDG-----RYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp -EEEEEESSSSEEEEEEETTS-----EEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred CCccCCCCCeeeEEEEEECCc-----EEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 478999999999999999875 7999998765 223345789999999999998 599998431 23 589
Q ss_pred EeecCCcCCc--cccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhH-HHHHHHhccCCCCcHHHhhcccccCHHHHHH
Q 016788 137 SFINARTLTP--ADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDV-SKFFEKASSLKFDEIEKQSMYETISFKEVQK 213 (382)
Q Consensus 137 e~i~G~~l~~--~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 213 (382)
+|++|+++.. ..-..+.++.++|+.|++||+.+.+... +..+... .......... ........... ....+.+
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~ 150 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSP-FADWPEWRLEFLRQLESW--TARLRASELFD-DLEELEE 150 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCC-HTHHHHHHHHHHHHHHHH--HHHHHHHCCHH-HHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccc-cccccccccccccccccc--cccccchhhhh-hhHHHHH
Confidence 9999987765 1111356789999999999999743221 1111110 0111111000 00000000000 0122333
Q ss_pred -HHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHH
Q 016788 214 -EIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNH 292 (382)
Q Consensus 214 -~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~ 292 (382)
.+..+.+.... ..+.++||||++++|||++++++.++|||||.+++|+|.+|++.++..+. .. -..+....
T Consensus 151 ~~~~~~~~~~~~-~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~~Dla~~~~~~~-~~------~~~~~~~~ 222 (239)
T PF01636_consen 151 RLLQELEALLPK-PLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPAYDLARLLRHFG-ED------QDPEFRRA 222 (239)
T ss_dssp HHHHHHHHHHHC-CSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETHHHHHHHHHHHT-TH------CHHHHHHH
T ss_pred HHHHHHHhhhcc-CCCcEEEEeccccccceeeeccceeEEEecccceECCHHHHHHHHHHHhc-cc------CCHHHHHH
Confidence 23344443322 57899999999999999984456679999999999999999999884432 10 13466788
Q ss_pred HHHHhc
Q 016788 293 FFRHYL 298 (382)
Q Consensus 293 fl~~Y~ 298 (382)
|+++|.
T Consensus 223 ~~~~~~ 228 (239)
T PF01636_consen 223 YLEAYG 228 (239)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 899987
No 21
>PRK10271 thiK thiamine kinase; Provisional
Probab=99.86 E-value=1.2e-20 Score=163.13 Aligned_cols=176 Identities=15% Similarity=0.213 Sum_probs=131.7
Q ss_pred EEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHH
Q 016788 135 VQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKE 214 (382)
Q Consensus 135 i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (382)
+.+|++|.+++.. ....+++..+++||..+.... .-+++..+..|...+... . .+...+ ..
T Consensus 2 lv~Wl~Ge~~~~~-----~~~~~La~~l~~LH~~p~~~~-~~~l~~~i~~Yw~~l~~~-~-----------~~~~wl-~~ 62 (188)
T PRK10271 2 AVDYLPGEVKSYL-----PDTNELAGLLYHLHQQPRFGW-RITLLPLLEQYWQQSDPA-R-----------RTPFWL-RM 62 (188)
T ss_pred cccccCCCcCCCc-----cCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHhccc-c-----------CCHHHH-HH
Confidence 5789999988744 136789999999999886432 235788888888776421 1 012222 24
Q ss_pred HHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHH
Q 016788 215 IVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFF 294 (382)
Q Consensus 215 ~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl 294 (382)
+..++......+.+.++||||++|+||++.+ +.+.+||||||+.|||++|||.++.+ +++++..|+
T Consensus 63 ~~~~~~~~~~~~l~~~p~H~D~~~~N~~~~~--~~~~lIDwe~a~~gDp~~DLa~~~~~------------~~~~~~~~l 128 (188)
T PRK10271 63 LKRLRKAGEPRPLRLAPLHMDVHAGNLVHSA--SGLRLIDWEYAGDGDIALELAAVWVE------------NTEQHRQLV 128 (188)
T ss_pred HHHHHhcccCCCCCeeeecCCCCCccEEEEC--CCEEEEeCCcccCCCHHHHHHHHHcC------------CHHHHHHHH
Confidence 5555555555677899999999999999974 44999999999999999999998753 456789999
Q ss_pred HHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHHHHHHhcccCCCCcchHHHH
Q 016788 295 RHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLFWALWALIQAKMSPIDFDYLGYF 350 (382)
Q Consensus 295 ~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q~~~~~~~fdy~~y~ 350 (382)
+.|++... . +...+..+++.|.+...++=.+|..++..+++ |-.|+.-|
T Consensus 129 ~~Y~~~~~---~---d~~~~~~~~~~W~p~~~~m~llWyev~~qq~~-d~~fl~~a 177 (188)
T PRK10271 129 NDYATRAK---I---DAAQLWRQVRRWFPWVLMLKAGWFEYRWRQTG-DQQFIRLA 177 (188)
T ss_pred HHHhCccC---C---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHHH
Confidence 99996421 1 23456778999999999999999999999875 54555444
No 22
>PLN02876 acyl-CoA dehydrogenase
Probab=99.86 E-value=1.3e-19 Score=192.73 Aligned_cols=247 Identities=13% Similarity=0.185 Sum_probs=160.5
Q ss_pred hHHHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHh
Q 016788 42 TPRVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSA 119 (382)
Q Consensus 42 ~~~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~ 119 (382)
.+.+..++++.++++.. ....+.++++++|.+|.+|+++..++. ...++|+|++.+.... ..+..+|+++++.|.+
T Consensus 20 ~~~l~~~l~~~~~~~~~-~~~~~~v~~l~gG~sn~ty~l~~~~~~-~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~ 97 (822)
T PLN02876 20 EDALLRYAAANVAGFPV-PPSTFKVSQFGHGQSNPTFLLEVGNGG-SVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGE 97 (822)
T ss_pred HHHHHHHHHHhCCCcCC-CccceeEEEeCCCCcCceEEEEECCCC-cceeEEEEeCCCCccCccHHHHHHHHHHHHHHhh
Confidence 36777888888888753 223478999999999999999876531 1247999998654321 1245799999999985
Q ss_pred -CCCC-ceEEEEeCC----c---eEEEeecCCcCCccccC--C----hHHHHHHHHHHHHHhcccCCCC-----CCCcch
Q 016788 120 -AGFG-AKLLAVFGN----G---MVQSFINARTLTPADMR--N----PKLAAEIAKQLRRFHQVEIPGS-----KEPQLW 179 (382)
Q Consensus 120 -~gl~-P~~~~~~~~----g---~i~e~i~G~~l~~~~~~--~----~~~~~~ia~~La~lH~~~~~~~-----~~p~~~ 179 (382)
.+++ |++++...+ | +|++|++|+.+....+. . ..+..++++.|++||+++.+.. ..|..+
T Consensus 98 ~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~ 177 (822)
T PLN02876 98 HTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNY 177 (822)
T ss_pred cCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCch
Confidence 5665 999987532 3 69999999876532221 1 2367889999999999876421 112211
Q ss_pred --hhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhcccCC---CeeeeccCCCCCceeeeCCC-CCEEEE
Q 016788 180 --NDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAGHLNA---PVVFSHNDLLSGNIMVNDEQ-EKLYLI 253 (382)
Q Consensus 180 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~---~~vl~H~Dl~~~NiL~~~~~-~~~~lI 253 (382)
..+..|..+..... .. . .......+.+.+.+|....+.... +.++||||++++|||+++++ +.+.||
T Consensus 178 ~~~~l~~w~~~~~~~~-~~-----~-~~~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVL 250 (822)
T PLN02876 178 CKRQVERWAKQYLAST-GE-----G-KPPRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGIL 250 (822)
T ss_pred HHHHHHHHHHHHHHhh-cc-----c-CCCCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEE
Confidence 12333333221100 00 0 000123344445666665543221 57999999999999997533 346999
Q ss_pred EeecCCCCCchhhHHhhhhhcCcc------------cc--CCCCCCCHHHHHHHHHHhcCC
Q 016788 254 DFEYGSYNYRGYDIGNHFSEYAGY------------DC--DYSLYPNKDEQNHFFRHYLRP 300 (382)
Q Consensus 254 DfE~a~~~~~~~Dla~~~~e~~~~------------~~--~~~~~p~~~~~~~fl~~Y~~~ 300 (382)
|||+++.|||.+|||.++..|+.. .. ....+|+ +++|++.|.+.
T Consensus 251 DWE~a~~GdPl~DLa~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~---~~e~~~~Y~~~ 308 (822)
T PLN02876 251 DWELSTLGNQMCDVAYSCLPYIVDINLDNQQVGKGFEFTGIPEGIPS---LPEYLAEYCSA 308 (822)
T ss_pred eeeccccCChHHHHHHHhhhccccccCCccccccccccCcCCCCCCC---HHHHHHHHHHH
Confidence 999999999999999988765311 00 0123455 67899999865
No 23
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=99.86 E-value=8.1e-20 Score=172.72 Aligned_cols=254 Identities=18% Similarity=0.215 Sum_probs=164.7
Q ss_pred eEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC-ceEEEE-eC------Cc--
Q 016788 64 FSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG-AKLLAV-FG------NG-- 133 (382)
Q Consensus 64 ~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~-P~~~~~-~~------~g-- 133 (382)
..+..+.+ ..|.||+|.+.++ ++|||++.+. ....+...|..+++.|++.|++ |.++.. +. +|
T Consensus 29 ~~~~~l~s-~eN~~f~~~~~~g-----~~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~ 101 (331)
T COG2334 29 GSLRGLNS-EENSNFRVQTEDG-----RYILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGP 101 (331)
T ss_pred cccccccc-ccCceEEEEecCC-----CeEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCc
Confidence 34567765 8999999999987 5899999987 4445667899999999999985 444322 21 23
Q ss_pred ---eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCC--CCC----cchhhHHHHHHHhccCCCCcHHHhhccc
Q 016788 134 ---MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGS--KEP----QLWNDVSKFFEKASSLKFDEIEKQSMYE 204 (382)
Q Consensus 134 ---~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~--~~p----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (382)
.|.+|++|+++.. -.+.+.+..+|+.|++||...-... ..+ ..|.-..... ........+..
T Consensus 102 r~a~lf~~l~G~~~~~--~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~-~~~~~~~~~~~------ 172 (331)
T COG2334 102 RPAALFEYLPGRPLER--DDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRA-LLRLDLVEPED------ 172 (331)
T ss_pred eeEEEEEecCCcCcCC--CCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchh-hhhhcccCchh------
Confidence 4899999998874 2356779999999999999754322 111 1232100000 00000000000
Q ss_pred ccCHHHHHHHHHHHHHHhcccC--CCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCC
Q 016788 205 TISFKEVQKEIVELKELAGHLN--APVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYS 282 (382)
Q Consensus 205 ~~~~~~l~~~~~~l~~~~~~~~--~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~ 282 (382)
....+...++.+.+.+...- ....+||||++++||++++++..+++|||++|++|+..+|||..++.|. .+..
T Consensus 173 --l~a~~~~~~~~~~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~~~~i~DlAi~l~~~~---~d~~ 247 (331)
T COG2334 173 --LRAALLAALDRLLARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGYGWFIYDLAIALNAWN---GDEA 247 (331)
T ss_pred --hHHHHHHHHHHHHhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccccchHHHHHHHHHHHhh---cCCC
Confidence 11233344444444433211 1123999999999999985322589999999999999999999997761 1211
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHHHHHHhcccCCCCcchH
Q 016788 283 LYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLFWALWALIQAKMSPIDFDYL 347 (382)
Q Consensus 283 ~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q~~~~~~~fdy~ 347 (382)
+ ...+...|+++|.+.. | .+..|+..+. .+..+..+....|..+.....|..+++.
T Consensus 248 -~-~~~~~~a~l~GY~~v~-p--l~~~El~~Lp----~l~r~~a~~~~~~~~~~~~~~p~~~~~~ 303 (331)
T COG2334 248 -D-PRAAIAAFLEGYEEVR-P--LTAAELELLP----DLRRLRALRLWAWRLIRWLLPPAGRLWL 303 (331)
T ss_pred -C-cHHHHHHHHHHHHhcC-C--CCHHHHHHHH----HHHHHHHHHHHHHHhhhhhcCCCCcchh
Confidence 1 3467899999998764 3 5677777665 4444566677778888877765555543
No 24
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=99.84 E-value=2.2e-19 Score=167.95 Aligned_cols=211 Identities=15% Similarity=0.215 Sum_probs=145.8
Q ss_pred HHHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcC--CCCCcccchHHHHHHHHHHHhC
Q 016788 43 PRVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYG--PNTDIVINRQRELQAIKYLSAA 120 (382)
Q Consensus 43 ~~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~--~~~~~~idr~~E~~~l~~l~~~ 120 (382)
..+..+++..+|+|.. ...+..++||.+|.+|++..++. ++|||.+. .......+..+|+.+++.+...
T Consensus 11 ~~l~~~l~~~ip~~~~----~~~v~~~~~G~sn~t~~~~~~~~-----~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~ 81 (321)
T COG3173 11 AALAAYLRSQIPGYAG----LLIVEEISGGWSNDTFRLGDTGQ-----KYVLRKPPRGDPVESAHDEKREYRVIAALLDV 81 (321)
T ss_pred HHHHHHHHhhCcCcCC----CceeeeccCCcccceEEEecCCc-----eEEEecCCccccchhhhHHHhHHHHHHHhcCC
Confidence 6677788999999964 45677889999999999988743 89999663 3344566788999999999887
Q ss_pred CCC-ceEEEEeCC---c---eEEEeecCCcCCcccc---CChHHHH-HHHHHHHHHhcccCCCC---CCCc--chhhHHH
Q 016788 121 GFG-AKLLAVFGN---G---MVQSFINARTLTPADM---RNPKLAA-EIAKQLRRFHQVEIPGS---KEPQ--LWNDVSK 184 (382)
Q Consensus 121 gl~-P~~~~~~~~---g---~i~e~i~G~~l~~~~~---~~~~~~~-~ia~~La~lH~~~~~~~---~~p~--~~~~~~~ 184 (382)
.++ |+.++.... | .|++|++|+.+..... .....+. .+++.|+.||+++..+. ..|. .-..+..
T Consensus 82 ~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~ 161 (321)
T COG3173 82 DVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLAR 161 (321)
T ss_pred CCCCcccccccccCCCCCceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhH
Confidence 775 888887643 3 5999999965443211 1224455 89999999999984221 1111 1112333
Q ss_pred HHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCch
Q 016788 185 FFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~ 264 (382)
|..+.... .+.. ....+.+...+.+++......+.+.+++|||++++|||+++ ++.++|||||.+++|||.
T Consensus 162 ~~~~~~~~-------~~~~-~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~-~~~~gVlDwe~~~lGDP~ 232 (321)
T COG3173 162 WDDEYRRA-------KKEL-GGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDP-GRPTGVLDWELATLGDPL 232 (321)
T ss_pred HHHHHHHH-------HHhc-cCCCchHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeC-CCeeEEEeccccccCCcH
Confidence 33322100 0000 11123334445666665444667889999999999999986 566999999999999999
Q ss_pred hhHHhhh
Q 016788 265 YDIGNHF 271 (382)
Q Consensus 265 ~Dla~~~ 271 (382)
.|++..+
T Consensus 233 ~Dl~~~~ 239 (321)
T COG3173 233 EDLAIIC 239 (321)
T ss_pred HHHHHHH
Confidence 9999986
No 25
>PRK11768 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=3.5e-18 Score=163.14 Aligned_cols=256 Identities=13% Similarity=0.115 Sum_probs=152.1
Q ss_pred HHHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCC
Q 016788 43 PRVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGF 122 (382)
Q Consensus 43 ~~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl 122 (382)
+.+++.+... ++. ..-.+..+ ++..|.+|+|...++. ++|+|++.++.........|.+++..|++.|+
T Consensus 14 ~~~~~a~~~~--g~~----~~~~~~~l-~s~eN~vy~v~~~~~~----~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gi 82 (325)
T PRK11768 14 DLILDALESL--GLR----VDGRLLAL-NSYENRVYQFGDEDGR----RVVAKFYRPERWSDAQILEEHAFALELAEAEI 82 (325)
T ss_pred HHHHHHHHHc--CCC----CccceEee-ccccceEEEEecCCCC----EEEEEEcCcccCCHHHHHHHHHHHHHHHHCCC
Confidence 3455555544 332 12335566 5778999999987653 79999997543222234678999999999998
Q ss_pred C-ceEEEEeC------Cc---eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCC--CCCCcchhhHHHHH----
Q 016788 123 G-AKLLAVFG------NG---MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPG--SKEPQLWNDVSKFF---- 186 (382)
Q Consensus 123 ~-P~~~~~~~------~g---~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~--~~~p~~~~~~~~~~---- 186 (382)
+ |.++..+. +| .|++|++|++.... ++....++|+.|++||...... ...|. |+ +..+.
T Consensus 83 pv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~~~~---~~~~~~~lG~~LarlH~~~~~~~~~~r~~-~~-~~~~~~~~~ 157 (325)
T PRK11768 83 PVVAPLAFNGQTLHEHQGFRFALFPRRGGRAPELD---NLDQLEWVGRFLGRIHQVGAKRPFEHRPT-LD-LQEYGIEPR 157 (325)
T ss_pred CCCCCccCCCCEEEEECCEEEEEEeeeCCCCCCCC---CHHHHHHHHHHHHHHHhhccCCCCCCCCc-CC-HHHHHHHHH
Confidence 6 44432211 23 48899999876543 5667899999999999976532 21221 11 11111
Q ss_pred HHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhh
Q 016788 187 EKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYD 266 (382)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~D 266 (382)
..+....+........+ ...+.+.+..+++.+...+.+.++||||+|++|||++ + .++||||+.|++|++.+|
T Consensus 158 ~~l~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~liHgD~h~~NvL~~--d-~~~iIDFDd~~~g~~i~D 230 (325)
T PRK11768 158 DWLLASDLIPSDLRPAY----LAAADQLLAAVEACWARGDVRLLRLHGDCHPGNILWR--D-GPHFVDLDDARMGPAVQD 230 (325)
T ss_pred HHHHhCCCCCHHHHHHH----HHHHHHHHHHHHHHHhcCCCCccceecCCCchhcccc--C-CcEEEeCCCCCCCCHHHH
Confidence 11110011111111111 0111122222333332224677999999999999994 3 589999999999999999
Q ss_pred HHhhhhhcCccccCCCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 016788 267 IGNHFSEYAGYDCDYSLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLFWALWALIQ 336 (382)
Q Consensus 267 la~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q 336 (382)
|+.+++... .. ..++...|+++|.+.. + .+..++..+- .++.+..+..+.|..-+
T Consensus 231 La~~l~~~~-------~~-~~~~~~~~l~GY~~~r-~--l~~~e~~~l~----~l~~lR~~~~~~W~~~r 285 (325)
T PRK11768 231 LWMLLSGDR-------AE-QLMQLETLLEGYEEFC-E--FDPRELALIE----PLRALRLIHYSAWLARR 285 (325)
T ss_pred HHHHhccCc-------ch-hHHHHHHHHHHhhccC-C--CCHHHHHHHH----HHHHHHHHHHHHHHhhc
Confidence 998765311 11 2456789999998653 3 4556654432 34444444444555544
No 26
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=99.84 E-value=3.6e-19 Score=165.75 Aligned_cols=206 Identities=10% Similarity=0.124 Sum_probs=133.7
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhC-CCC-ceEEEEeCCceEEEeecCC
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAA-GFG-AKLLAVFGNGMVQSFINAR 142 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~-gl~-P~~~~~~~~g~i~e~i~G~ 142 (382)
++.....|.+|.+|.+...++. ++|+|++.... .....++|.++++.|+.. .++ |+++..+.+..++++++|.
T Consensus 15 ~~~~~~~g~~~~v~~i~~~~g~----~~VlR~p~~~~-~~~~l~rE~~vL~~L~~~l~vpvP~~~~~~~~~~~y~~i~G~ 89 (276)
T cd05152 15 TLSLNESGLDFQVVFAKDTDGV----PWVLRIPRRPD-VSERAAAEKRVLALVRKHLPVQVPDWRVHTPELIAYPKLPGV 89 (276)
T ss_pred cceecCCcceeEEEEEEcCCCC----eEEEEecCCHH-HHHHHHHHHHHHHHHHhcCCCCCCceeeecCceEEEeccCCC
Confidence 4556677888999988665442 79999996432 222457899999999874 443 7777666666789999998
Q ss_pred cCCccc-------------cCChHHHHHHHHHHHHHhcccCCCC---CCCc-----chhhHHHHHHHhccCCCCcHHHhh
Q 016788 143 TLTPAD-------------MRNPKLAAEIAKQLRRFHQVEIPGS---KEPQ-----LWNDVSKFFEKASSLKFDEIEKQS 201 (382)
Q Consensus 143 ~l~~~~-------------~~~~~~~~~ia~~La~lH~~~~~~~---~~p~-----~~~~~~~~~~~~~~~~~~~~~~~~ 201 (382)
++..-+ -..+.++.++|+.|++||+++.... ..|. .+..+...+++...
T Consensus 90 p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~---------- 159 (276)
T cd05152 90 PAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQDEAEAAGIPVETPEEVRQTMADRMDRVKE---------- 159 (276)
T ss_pred cccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChhhccccCCCCCCHHHHHHHHHHHHHHHHH----------
Confidence 663211 1234578899999999999875321 1111 11122222221110
Q ss_pred cccccCHHHHHHHHHHHHHHhc---ccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccc
Q 016788 202 MYETISFKEVQKEIVELKELAG---HLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYD 278 (382)
Q Consensus 202 ~~~~~~~~~l~~~~~~l~~~~~---~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~ 278 (382)
... . ...+ ++.+.+++. ..+.+.++||||++++|||++++++.++|||||++++|||++|||.++..
T Consensus 160 ~~~-~-~~~l---~~~~~~~L~~~~~~~~~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa~Dla~~~~~----- 229 (276)
T cd05152 160 EFG-V-SEAL---WNRWQAWLDDDSYWPRHTVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPARDFVLHYRI----- 229 (276)
T ss_pred hcC-C-CHHH---HHHHHHHHhhcCCCCCCCeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHHHHHHHHHHh-----
Confidence 000 0 1112 222333332 23556799999999999999853344689999999999999999976532
Q ss_pred cCCCCCCCHHHHHHHHHHhcCCC
Q 016788 279 CDYSLYPNKDEQNHFFRHYLRPD 301 (382)
Q Consensus 279 ~~~~~~p~~~~~~~fl~~Y~~~~ 301 (382)
...+....|+++|....
T Consensus 230 ------~~~~~~~~~~~~Y~~~~ 246 (276)
T cd05152 230 ------FGEAGLERLIDAYEAAG 246 (276)
T ss_pred ------cChHHHHHHHHHHHHcC
Confidence 13456899999998753
No 27
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=99.83 E-value=2.2e-18 Score=163.66 Aligned_cols=243 Identities=20% Similarity=0.304 Sum_probs=148.4
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC-ceEEEEeC-------Cc---e
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG-AKLLAVFG-------NG---M 134 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~-P~~~~~~~-------~g---~ 134 (382)
|..+..+ +.+|+|.+.++ ++++|++..... ....|..++..|++.|++ |+++..-. +| .
T Consensus 3 ~~~~~~~--~~v~~v~t~~g-----~~~LK~~~~~~~---~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~ 72 (313)
T TIGR02906 3 VKSIKPL--RNVYKVETDSG-----NKCLKKINYPPE---RLLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYV 72 (313)
T ss_pred eeeccCC--ccEEEEEeCCC-----CeEEEEcCCCHH---HHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence 4444333 45999998766 699998753221 235688889999999985 77775421 22 5
Q ss_pred EEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCC----CC----cchhh-HHHHHHHhccCCCCcHHH----hh
Q 016788 135 VQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSK----EP----QLWND-VSKFFEKASSLKFDEIEK----QS 201 (382)
Q Consensus 135 i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~----~p----~~~~~-~~~~~~~~~~~~~~~~~~----~~ 201 (382)
|++|++|+++.. .++..+.++|+.|++||........ .+ ..|.. +...++.+.. +.+... ..
T Consensus 73 l~~~i~G~~~~~---~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~--~~~~~~~~~~~~ 147 (313)
T TIGR02906 73 LTEWIEGRECDF---NNPIDLKKAAKGLALFHHASKGYVPPDGSKIRSKLGKWPKQFEKRLKELER--FKKIALEKKYKD 147 (313)
T ss_pred EehhccCcCCCC---CCHHHHHHHHHHHHHHHHhCCCCCCCCcchhhccccchHHHHHHHHHHHHH--HHHHHHhhccCC
Confidence 899999988763 3466689999999999997643211 01 11221 1111111110 000000 00
Q ss_pred ccccc---CHHHHHHH----HHHHHH-----HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHh
Q 016788 202 MYETI---SFKEVQKE----IVELKE-----LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGN 269 (382)
Q Consensus 202 ~~~~~---~~~~l~~~----~~~l~~-----~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~ 269 (382)
.+... ..+.+... +..+.+ .......+.++||||++++||++++ +.+++||||.+++|++.+|||.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~liHgD~~~~Nil~~~--~~i~lIDfd~~~~~~~~~Dla~ 225 (313)
T TIGR02906 148 EFDKLYLKEVDYFLERGKKALELLNKSKYYDLCKEAKKIRGFCHQDYAYHNILLKD--NEVYVIDFDYCTIDLPVRDLRK 225 (313)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHhhcCcCceEcCCCCcccEEEeC--CcEEEEECcccccCCcHHHHHH
Confidence 00000 00111111 111111 1112345689999999999999974 5689999999999999999999
Q ss_pred hhhhcCccccCCCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 016788 270 HFSEYAGYDCDYSLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLFWALWALIQ 336 (382)
Q Consensus 270 ~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q 336 (382)
++..++. ....+ +.+....|+++|.+.. .++..|+..++ .+..+.+.+|.++--+.
T Consensus 226 ~l~~~~~---~~~~~-d~~~~~~~l~gY~~~~---~L~~~e~~~l~----~~l~~p~~~~~~~~~y~ 281 (313)
T TIGR02906 226 LIIKLMK---KNGVW-DLEKAKEIIEAYSSIN---PLSKEEKEVLY----IDLAFPHKFWKIGKQYY 281 (313)
T ss_pred HHHHHHH---hccCC-CHHHHHHHHHHhhccC---CCCHHHHHHHH----HHHhChHHHHHHHHHHH
Confidence 8876641 11112 3456789999999864 36778887776 67778887777765554
No 28
>PRK10593 hypothetical protein; Provisional
Probab=99.82 E-value=1.4e-18 Score=163.77 Aligned_cols=238 Identities=14% Similarity=0.170 Sum_probs=146.2
Q ss_pred CeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCC-CCcccchHHHHHHHHHHHhCC-C-CceEEEEeC-------C
Q 016788 63 RFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPN-TDIVINRQRELQAIKYLSAAG-F-GAKLLAVFG-------N 132 (382)
Q Consensus 63 ~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~-~~~~idr~~E~~~l~~l~~~g-l-~P~~~~~~~-------~ 132 (382)
..++++|+||.++.+|+++..++ ++|+|+.... +... ...|+..++.|++.+ + .|++++... .
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~~~-----~~~~k~~~~~~~~~~--~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~ 88 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDSQG-----NPMPLMARSFSTPGV--AQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPD 88 (297)
T ss_pred hheeeecCCccceeEEEEEcCCC-----CEEEEEecccccchH--HHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCe
Confidence 35788999999999999987765 6888886542 2222 368999999999875 6 499998642 2
Q ss_pred ceEEEeecCCcCCccccC---ChHHHHHHHHHHHHHhcccCCCC---C---CCcchhhHHHHHHHhccCCC--CcHHHhh
Q 016788 133 GMVQSFINARTLTPADMR---NPKLAAEIAKQLRRFHQVEIPGS---K---EPQLWNDVSKFFEKASSLKF--DEIEKQS 201 (382)
Q Consensus 133 g~i~e~i~G~~l~~~~~~---~~~~~~~ia~~La~lH~~~~~~~---~---~p~~~~~~~~~~~~~~~~~~--~~~~~~~ 201 (382)
++|+|||+|.++...... ...+...+++.|++||+.+..+. . ....| ..|+.+-..... .......
T Consensus 89 ~LVmE~i~G~~~~~~~~~~~~~~~l~~~l~~~La~LH~~~~~g~~g~~~~~~~~~w---~~f~~~rl~~~~~~~~~~~~~ 165 (297)
T PRK10593 89 VLLLERLRGVSVEAPARTPERWEQLKDQIVEGLLAWHRIDSRGCVGAVDSTQENLW---PSWYQQRVEVLWTTLNQFNNT 165 (297)
T ss_pred EEEEeccCCEecCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcccCCCCcccccH---HHHHHHHHHHHHhhhhhcccc
Confidence 379999999876532111 12345667899999999763211 1 11233 334332110000 0000000
Q ss_pred cccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCC-EEEEEeecCCCCCchhhHHhhhhhcCccccC
Q 016788 202 MYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEK-LYLIDFEYGSYNYRGYDIGNHFSEYAGYDCD 280 (382)
Q Consensus 202 ~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~-~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~ 280 (382)
.+.......+....+.+.+.+.....++++||||||++|+|++.+++. +.+||+..+.+|++.+||+..+ +.+|
T Consensus 166 ~l~~~~~~~~~~l~~~l~~~L~~~~~~psLlHGDlw~gNvl~~~~~~~i~~liDPa~~~~g~rE~DLa~~~--~~~f--- 240 (297)
T PRK10593 166 GLTMQDRRILFRTRECLPALFEGFNDNCVLVHGNFTLRSMLKDPRSDQLLAMLNPGLMLWAPREYELFRLM--DNGL--- 240 (297)
T ss_pred CCChhHHHHHHHHHHhchhhhccCCCCCeeEeCCCCcccEEECCCCCceEEEECchHhCCCCHHHhHHHhh--cCCc---
Confidence 000000011111122233334333456799999999999999753233 7999999999999999999764 2222
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhH
Q 016788 281 YSLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLF 328 (382)
Q Consensus 281 ~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~ 328 (382)
...|+++|.+.. |.+...++...+| ++|.++.|+.
T Consensus 241 ---------~~~f~~~Y~~~~-pl~~g~~~R~~ly---~Ly~~l~h~~ 275 (297)
T PRK10593 241 ---------AEQLLWRYLQKA-PVAESFIWRRWLY---VLWDEVAQLV 275 (297)
T ss_pred ---------cHHHHHHHHHhC-CCCccHHHHHHHH---HHHHHHHHHH
Confidence 258999999875 4333444555565 4666776664
No 29
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=99.82 E-value=5.8e-18 Score=163.82 Aligned_cols=223 Identities=22% Similarity=0.262 Sum_probs=139.5
Q ss_pred hHHHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----C---cccch-HHHHHH
Q 016788 42 TPRVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----D---IVINR-QRELQA 113 (382)
Q Consensus 42 ~~~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~---~~idr-~~E~~~ 113 (382)
.+.+++++++..+-+.. .+..++++++||..|.+|+|+..++. +++|||...+.. + ...+| ..|.+.
T Consensus 9 ~~~v~~yl~~~~~~~~~--~~~~~~~elggGn~N~VyrV~~~~g~---~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~ 83 (401)
T PRK09550 9 EEDAVEYAALKLGLFDP--KALLTAREIGDGNLNLVFRVSDTEGG---KSVIVKQALPYVRVVGESWPLTLDRARIEAEA 83 (401)
T ss_pred HhHHHHHHHHhcCCCCC--cccceeeEcCCCceEEEEEEEeCCCC---eEEEEEecCcccccccccccccHHHHHHHHHH
Confidence 35678888666565542 45678999999999999999987641 379999865321 1 12233 678888
Q ss_pred HHHHHhC--CCCceEEEEeCCc--eEEEeecCCcCCc----cccCChHHHHHHHHHHHHHhcccCCCCCCCc-chhhHHH
Q 016788 114 IKYLSAA--GFGAKLLAVFGNG--MVQSFINARTLTP----ADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQ-LWNDVSK 184 (382)
Q Consensus 114 l~~l~~~--gl~P~~~~~~~~g--~i~e~i~G~~l~~----~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~-~~~~~~~ 184 (382)
|+.+++. +..|++|+++++. .|+||+++.+.-. ..-..|.+..++|+.|+++|-.+......+. .-.....
T Consensus 84 L~~l~~~~p~~VPkV~~~D~~~~~lVME~L~~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd~~~~~~~~~~~~~~ 163 (401)
T PRK09550 84 LKIQAKYVPDLVPKVYHYDEELAVTVMEDLSDHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSDFGLSSEEKKALVAK 163 (401)
T ss_pred HHHHHhhCCCCCCeEEEECCCCCEEEEecCCCccHHHHHHhcCCccHHHHHHHHHHHHHHHhccchhhcChhhhhhHHhh
Confidence 8888764 4579999998753 7999998843211 1122467889999999998853321100000 0000011
Q ss_pred HHHH-hcc--------CCCCcHHHhhcccc---------cCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCC
Q 016788 185 FFEK-ASS--------LKFDEIEKQSMYET---------ISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDE 246 (382)
Q Consensus 185 ~~~~-~~~--------~~~~~~~~~~~~~~---------~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~ 246 (382)
|.+. +.. .+|.+.. ...+.+ .....|..++.+|+..+ ...+.+++|||||++|||+++
T Consensus 164 f~N~~l~~ite~lvft~P~~~~~-~n~~~p~l~~~~~~l~~d~~L~~~~~~L~~~~--~~~~~~l~HgDl~~gni~~~~- 239 (401)
T PRK09550 164 FTNPELCKITEDLVFTDPYFDHE-TNNFEPELEPEVEELRADKELKLEVAKLKHKF--LTKAEALLHGDLHTGSIFVTE- 239 (401)
T ss_pred cCCHHHhhhhHhhccccchhhhh-hccCChhhHHHHHHHHhCHHHHHHHHHHHHHH--hcCCCceeeccCCcccEEeeC-
Confidence 1100 000 0010000 001110 01123444455555543 345678999999999999974
Q ss_pred CCCEEEEEeecCCCCCchhhHHhhhhhc
Q 016788 247 QEKLYLIDFEYGSYNYRGYDIGNHFSEY 274 (382)
Q Consensus 247 ~~~~~lIDfE~a~~~~~~~Dla~~~~e~ 274 (382)
+.+.+||||+|.+|+|+||||.++.++
T Consensus 240 -~~~~viD~E~a~~G~~~~Dlg~~lanl 266 (401)
T PRK09550 240 -EETKVIDPEFAFYGPIGFDIGTFIANL 266 (401)
T ss_pred -CCcEEEeccccccCChHHHHHHHHHHH
Confidence 469999999999999999999988764
No 30
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=99.79 E-value=6.8e-18 Score=160.23 Aligned_cols=246 Identities=14% Similarity=0.201 Sum_probs=150.0
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC-ceEEEEeC--------Cc--
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG-AKLLAVFG--------NG-- 133 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~-P~~~~~~~--------~g-- 133 (382)
.+..+ .|..|.+|+|.+++| .+++|......+ .......++..|++.|+. |.++.... +|
T Consensus 11 ~v~~i-~~~~~~v~~v~T~~G-----~~~Lk~~~~~~~---~l~~~~~~~~~L~~~G~~~~~~~~~t~~G~~~~~~~~~~ 81 (309)
T TIGR02904 11 QPEEM-EQVTGKLFKVYTDQG-----VFALKKLYADRN---TIESFVSQIQVLSEKGFSRIVPVYPTKDGSYYLFHGHFL 81 (309)
T ss_pred Cceee-ecccCcEEEEEeCCC-----CEEEEEeccchH---hHHHHHHHHHHHHHcCCCcCCceeecCCCCeeeEECCEE
Confidence 34444 355789999999877 699998863211 113567778999999984 44332221 22
Q ss_pred -eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCC-----cchhhH-HHH------HH----HhccCCCCc
Q 016788 134 -MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEP-----QLWNDV-SKF------FE----KASSLKFDE 196 (382)
Q Consensus 134 -~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p-----~~~~~~-~~~------~~----~~~~~~~~~ 196 (382)
.|++|++|.. .......+.++|+.||+||.........+ ..+.+. ..| +. ......+.+
T Consensus 82 ~~L~~wi~G~~----~~~~~~~~~~~~~~LA~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 157 (309)
T TIGR02904 82 YYLMPWLDIER----NEERNYQHESMFQELALLHRKTVKTERVTEEELKKHYERTLSRWENIPEGLEEFIVEAEAKWYMS 157 (309)
T ss_pred EEEeCCccccc----ccCCHHHHHHHHHHHHHHHHhhhCCCcccHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4889999942 22334558999999999999876321100 011111 111 11 110000000
Q ss_pred HHHhhccc---ccCHHHHHHHHHHHHHHh----cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHh
Q 016788 197 IEKQSMYE---TISFKEVQKEIVELKELA----GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGN 269 (382)
Q Consensus 197 ~~~~~~~~---~~~~~~l~~~~~~l~~~~----~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~ 269 (382)
. ....+- ......+...++.|.++. .....+.++||||++++|+|+++ ++.+++||||++++++|.+||+.
T Consensus 158 ~-fe~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~lcHgD~~~~Nvl~~~-~~~~~iIDfd~~~~d~~~~DLa~ 235 (309)
T TIGR02904 158 P-FELQACTYYHEVMQAAEFAQNKLEDWHEATKEKESWRTVLVHGKLSLSHFLYDE-TRGGYFINFEKASFASPLTDLAA 235 (309)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcceeeeCCCCcHHhEEEcC-CCCEEEEEhhhcccCCcHHHHHH
Confidence 0 000000 000112222222232221 12346789999999999999974 56799999999999999999999
Q ss_pred hhhhcCccccCCCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHHHHHHhc
Q 016788 270 HFSEYAGYDCDYSLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLFWALWALIQA 337 (382)
Q Consensus 270 ~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q~ 337 (382)
++...+.. .+ ++.+....||++|.+.. | ++..|...|+ .+.++.+-+|-+|--+..
T Consensus 236 ~~~~~~~~-~~----~~~~~~~~~l~~Y~~~~-p--L~~~E~~~l~----~~L~fP~~f~~~~~~yy~ 291 (309)
T TIGR02904 236 FFRRSFGT-YP----QPIDEMFEWFYTYEKTL-P--LTDEEIHLLT----SYLAYPGPFIRVIQNYTK 291 (309)
T ss_pred HHHHHHhh-CC----CChHHHHHHHHHHHhcC-C--CCHHHHHHHH----HHHhCCHHHHHHHHHHHh
Confidence 88765421 11 23355789999998764 3 6677777776 677889999988776654
No 31
>PRK12396 5-methylribose kinase; Reviewed
Probab=99.77 E-value=3.1e-17 Score=157.05 Aligned_cols=224 Identities=21% Similarity=0.287 Sum_probs=140.7
Q ss_pred hHHHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC------Ccccch-HHHHHHH
Q 016788 42 TPRVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT------DIVINR-QRELQAI 114 (382)
Q Consensus 42 ~~~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~------~~~idr-~~E~~~l 114 (382)
.+.+...+++.++.... .+.+.+++|+||..|.||+|..+.+. +++|||...+-. ....+| ..|..+|
T Consensus 12 ~~~v~~yl~~~l~~~~~--~~~~~~~eigdGnlN~VfrV~~~~~~---~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL 86 (409)
T PRK12396 12 ANDVIVYVKEKLSKFEH--AKGLQCKEIGDGNLNYVFRVWDEQKN---ISVIVKQAGDTARISDEFKLSTNRIRIESDVL 86 (409)
T ss_pred HhHHHHHHHHhcCCCCC--cccceeeEcCCCceEEEEEEeeCCCC---ceEEEEeccHhhccCCCCCCChHHHHHHHHHH
Confidence 35678888876565542 45688999999999999999874211 379988764421 223345 6789999
Q ss_pred HHHHh--CCCCceEEEEeCCc--eEEEeecCCc-CCcc---ccCChHHHHHHHHHHHHHhcccCCCCCCCcchh-hHHHH
Q 016788 115 KYLSA--AGFGAKLLAVFGNG--MVQSFINART-LTPA---DMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWN-DVSKF 185 (382)
Q Consensus 115 ~~l~~--~gl~P~~~~~~~~g--~i~e~i~G~~-l~~~---~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~-~~~~~ 185 (382)
+.+++ .+..|++|++++.- .|||+++... +... ....|.+++.+|..|++.|..+......+.-.+ ....|
T Consensus 87 ~~~~~~~P~~VP~vy~~D~e~~~~vMEdL~~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd~~l~~~~kk~~v~~f 166 (409)
T PRK12396 87 QLEEELAPGLVPKVYLFDSVMNCCVMEDLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMNHKEKKELVKNY 166 (409)
T ss_pred HHHHhhCCCcCCeEEEECcHHhhHHHHhCcccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcchhccChHHHHHhhHhc
Confidence 98877 35689999998643 6999996532 2211 123578899999999998875432110000000 00000
Q ss_pred HH-----Hhc----cCCCCcHHHhhc-cccc---------CHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCC
Q 016788 186 FE-----KAS----SLKFDEIEKQSM-YETI---------SFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDE 246 (382)
Q Consensus 186 ~~-----~~~----~~~~~~~~~~~~-~~~~---------~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~ 246 (382)
.+ ... ..+|.+...... +.+. .-..|..++.+|+..+ .....+|+|||||+||||+++
T Consensus 167 ~N~eLc~itedlvft~Py~~~~~~n~~~~~~~~~~~~~l~~D~~Lk~ev~~Lk~~F--~~~~~aLlHGDlHtGSI~v~~- 243 (409)
T PRK12396 167 INPELCEITEDLVYAEPFTNHNKRNELFPLNEGWIREHIYSDKELRLEVAKLKFSF--MTNAQALIHGDLHTGSVFVKN- 243 (409)
T ss_pred CCHHHHHHhcccccccCcccchhccCCCChhhHHHHHHHhcCHHHHHHHHHHHHHH--HhcchhhccCcCCCCCEEecC-
Confidence 00 000 112221110000 1100 1133444555565543 356679999999999999974
Q ss_pred CCCEEEEEeecCCCCCchhhHHhhhhhc
Q 016788 247 QEKLYLIDFEYGSYNYRGYDIGNHFSEY 274 (382)
Q Consensus 247 ~~~~~lIDfE~a~~~~~~~Dla~~~~e~ 274 (382)
+.+.+||.|+|.+||++||||.+++.+
T Consensus 244 -~~~kvIDpEFAfyGP~gFDiG~~lanl 270 (409)
T PRK12396 244 -DSTKVIDPEFAFYGPMGYDIGNVMANL 270 (409)
T ss_pred -CceEEEcccccccCCcHHHHHHHHHHH
Confidence 569999999999999999999987653
No 32
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.77 E-value=2.3e-17 Score=144.39 Aligned_cols=244 Identities=18% Similarity=0.257 Sum_probs=166.5
Q ss_pred HHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCC-C
Q 016788 44 RVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAG-F 122 (382)
Q Consensus 44 ~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~g-l 122 (382)
.+.+.+.+.++.- +.-+.++++||-.|..|+|..... ++++|++...-..+. ..|+.-|+.|++.+ +
T Consensus 4 ~i~~qlse~~g~~-----~i~er~~v~gG~inea~~v~dg~~-----~~FvK~n~~~~~~~f--~AEa~gL~~la~s~ti 71 (286)
T COG3001 4 AISQQLSEQLGEG-----EIKEREEVSGGDINEAWRLRDGTD-----PFFVKCNQREQLSMF--TAEADGLELLARSNTI 71 (286)
T ss_pred HHHHHHHHHhCch-----hhhcccccCCccccceeEeecCCc-----ceEEEecchhhHHHH--HHHHHHHHHHHhcCCc
Confidence 4455666666652 334678899999999999988765 799999865433333 57888899999877 6
Q ss_pred -CceEEEEeCC-c---eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCC------------CCCCcchh-hHHH
Q 016788 123 -GAKLLAVFGN-G---MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPG------------SKEPQLWN-DVSK 184 (382)
Q Consensus 123 -~P~~~~~~~~-g---~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~------------~~~p~~~~-~~~~ 184 (382)
.|+++..... + .|++|++-.+++.. -..++|+.||+||....+. ...|+.|. +|..
T Consensus 72 ~VP~vi~~G~~~~~sylVle~L~~~~~d~~------~~~~~GqqLA~LH~~~~~~~fG~d~dn~iG~t~QpN~W~~~Wa~ 145 (286)
T COG3001 72 TVPKVIAVGASRDHSYLVLEYLPTGPLDAH------SAFILGQQLARLHQWGGQAQFGLDFDNYIGTTPQPNTWQRRWAT 145 (286)
T ss_pred cccceEEecCCCCeeEEEEeeccCCCCCch------hHHHHHHHHHHHHhhcCccccCcccccccCCCCCCCCCcchHHH
Confidence 4999988642 2 69999988777643 2678999999999975321 12355564 3455
Q ss_pred HHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCch
Q 016788 185 FFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~ 264 (382)
|+.+-+- .+.-...+++ ..++.++.+.+..+.+.+......+.++||||+.+|..+.. ++ ..++|.- |-+|||.
T Consensus 146 FfaeqRi-g~qlqlar~r--g~~f~did~~~~~v~elL~~hqpqPsLlHGDLW~gN~a~~~-~G-Pv~fDPA-~y~GDrE 219 (286)
T COG3001 146 FFAEQRI-GWQLQLARER--GLTFGDIDAIVEKIQELLADHQPQPSLLHGDLWSGNCAFGK-DG-PVIFDPA-CYWGDRE 219 (286)
T ss_pred HHHHhhh-hHHHHHHHHh--CCCccCHHHHHHHHHHHHhcCCCCcceeecccccccccccC-CC-Ceeeccc-cccCCcc
Confidence 5543321 1111111111 12345555566667777777777889999999999999875 45 9999997 7899999
Q ss_pred hhHHhhhhhcCccccCCCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhH
Q 016788 265 YDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLF 328 (382)
Q Consensus 265 ~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~ 328 (382)
+|||+. ++. ..|| .+|+++|.+.. |.+.-..+...+| ++|.++.|+.
T Consensus 220 ~Dlam~--elF------ggfp-----~efy~gY~sv~-PL~~G~~eRk~iY---qLY~llnh~~ 266 (286)
T COG3001 220 CDLAML--ELF------GGFP-----PEFYDGYQSVS-PLPAGYLERKPIY---QLYHLLNHAN 266 (286)
T ss_pred cceehh--hhh------cCCc-----HHHHHhhhccC-CCCCchHHHhHHH---HHHHHHHHHH
Confidence 999963 332 2233 57999999875 5455556666666 4666666654
No 33
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=99.77 E-value=6.7e-18 Score=157.27 Aligned_cols=247 Identities=20% Similarity=0.252 Sum_probs=133.7
Q ss_pred HHHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhC-C
Q 016788 43 PRVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAA-G 121 (382)
Q Consensus 43 ~~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~-g 121 (382)
+.|.+.+.+.++. +-...++++++||..|..|+++..++ +++||+.......+. +.|++-|+.|++. +
T Consensus 3 ~~i~~~~~~~~~~----~~~i~~~~~v~GG~i~~a~~~~~~~~-----~~FvK~~~~~~~~~f--~~Ea~gL~~L~~~~~ 71 (288)
T PF03881_consen 3 QAIEQQISEQLGA----DFKITSIEPVSGGDINEAYRLDTDGG-----SYFVKVNSESGRDMF--EGEAEGLKALAEANP 71 (288)
T ss_dssp HHHHHHHHHHHTS---------EEEEE--SSSSEEEEEETTS------EEEEEEEEGGGCCHH--HHHHHHHHHHCHTTT
T ss_pred HHHHHHHHHHhCC----CCceeeeEecCCCChhheEEEECCCc-----cEEEEecChhhHHHH--HHHHHHHHHHHhcCC
Confidence 3455666666553 12356889999999999999996554 899999874333333 6899999999663 3
Q ss_pred C-CceEEEEe--CC--ceEEEeecCCcCCccccCChHHHHHHHHHHHHHhc-ccCCCC-----------CCCcchh-hHH
Q 016788 122 F-GAKLLAVF--GN--GMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQ-VEIPGS-----------KEPQLWN-DVS 183 (382)
Q Consensus 122 l-~P~~~~~~--~~--g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~-~~~~~~-----------~~p~~~~-~~~ 183 (382)
+ .|+|++.. .+ .+|+|||+....+.. ....+|+.||+||. .+.+.- ..++.|. +|.
T Consensus 72 ~~vP~vi~~G~~~~~~fLlle~l~~~~~~~~------~~~~lg~~LA~LH~~~~~~~FGf~~~~~~G~~~q~N~w~~~W~ 145 (288)
T PF03881_consen 72 IRVPKVIAWGEYDDDAFLLLEFLEMGSPSPP------DWEELGRQLAALHQWSPAGKFGFPVDTYIGSLPQPNTWTDSWE 145 (288)
T ss_dssp SBS--EEEEEE-SSCCEEEEE--------CC------HHHHHHHHHHHHHH-T--SSBB-SS-EEETTEEE----BS-HH
T ss_pred CCCCeEEEEEeecCCceEEEEeecCCCCCch------hHHHHHHHHHHHhhhcCCCCcCCCcCCcccCcCCCCCCCCCHH
Confidence 3 69999874 22 379999987633322 36899999999999 332210 1123332 355
Q ss_pred HHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCc
Q 016788 184 KFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYR 263 (382)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~ 263 (382)
+|+.+.+.....+....+. .....+...++.+.+.+.....+++++||||++||++++. ++...|||-- +.+|++
T Consensus 146 ~Ff~~~RL~~~l~~~~~~~---~~~~~~~~l~~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~-~g~p~l~DPa-~yygh~ 220 (288)
T PF03881_consen 146 EFFAEQRLRPQLELAREKG---GLDAELERLVERLPSLLPGREPKPSLLHGDLWSGNVGFDA-DGEPVLFDPA-CYYGHR 220 (288)
T ss_dssp HHHHHHCCHHHHHHHHHCT---SS-CHHHHHHHHHHHCCTTS----EEE-SS-SGGGEEEET-TE-EEE-S----EEE-C
T ss_pred HHHHHHHHHHHHHHHHhhC---CchhHHHHHHHHHHHHhcCCCCCceeeEcCccccceeecC-CCCceeeccc-cccCch
Confidence 5654432100000011111 1123344445555555544455789999999999999986 5779999998 889999
Q ss_pred hhhHHhhhhhcCccccCCCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhH
Q 016788 264 GYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLF 328 (382)
Q Consensus 264 ~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~ 328 (382)
.+|||+.- + | ..+ -..|+++|.+.. |.+...++...|| ++|.++.|+.
T Consensus 221 E~DLam~~--l--f----ggf-----~~~f~~~Y~~~~-Pl~~g~~~R~~lY---~Ly~lL~H~~ 268 (288)
T PF03881_consen 221 EVDLAMTR--L--F----GGF-----PDEFYDAYQEHY-PLSEGWEDRNPLY---QLYHLLNHLN 268 (288)
T ss_dssp HHHHHHHC--C--C----STT-----HHHHHHHHHHHS----TTHHHHHHHH---HHHHHHHHHH
T ss_pred Hhhhhhhh--h--h----CCC-----CHHHHHHHHhcC-CCCcCHHHHHHHH---HHHHHHHHHH
Confidence 99999641 1 1 112 257999998865 4444556666676 4566666554
No 34
>PRK06148 hypothetical protein; Provisional
Probab=99.76 E-value=2.7e-16 Score=169.73 Aligned_cols=273 Identities=17% Similarity=0.199 Sum_probs=169.6
Q ss_pred hHHHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhC-
Q 016788 42 TPRVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAA- 120 (382)
Q Consensus 42 ~~~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~- 120 (382)
.+.+.+++.++++- . -++++| +|..|.+|+|+..++. .||+|++.+.. .....+.|.+++.+|++.
T Consensus 13 ~~~~~~~~~~~ygl----~---~~~~~L-~s~~d~nf~v~~~~g~----~yVLKi~~~~~-~~~~~~~q~~~L~hL~~~~ 79 (1013)
T PRK06148 13 TKDAEALLAQHFGI----S---ATATPL-DGERDLNFRLTTDDGA----DYILKIVNPSE-PRVESDFQTAALDHLAAVA 79 (1013)
T ss_pred HHHHHHHHHHHcCC----c---eEEeec-CCcCCceEEEEeCCCC----eEEEEEcCCcc-chhHHHHHHHHHHHHHhhC
Confidence 45777788887653 1 246788 4667999999987653 79999998642 222335677789999876
Q ss_pred -CCC-ceEEEEe----------CCc-----eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCC----CCCcch
Q 016788 121 -GFG-AKLLAVF----------GNG-----MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGS----KEPQLW 179 (382)
Q Consensus 121 -gl~-P~~~~~~----------~~g-----~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~----~~p~~~ 179 (382)
+++ |+++... .+| ++++|++|+++....-..+..+.++|+.|++||....... .....|
T Consensus 80 ~glpvP~~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~W 159 (1013)
T PRK06148 80 PDLPVPRLIPSLSGASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDW 159 (1013)
T ss_pred CCCCcCeeeecCCCCeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccccc
Confidence 775 8877431 233 4899999998865222357789999999999999643221 111234
Q ss_pred hhH-HHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHh-c-ccCCCeeeeccCCCCCceeeeCCC--CCEEEEE
Q 016788 180 NDV-SKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELA-G-HLNAPVVFSHNDLLSGNIMVNDEQ--EKLYLID 254 (382)
Q Consensus 180 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~-~-~~~~~~vl~H~Dl~~~NiL~~~~~--~~~~lID 254 (382)
... ..|+..... ...+...+ ..+.+.++.+.+.+ . ....+..+||||+++.|||+++++ ...+|||
T Consensus 160 dl~~~~~l~~~l~-~i~d~~~r--------~~l~~~~~~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiID 230 (1013)
T PRK06148 160 DLRHAGRARDRLH-FIDDPEDR--------ALVERFLARFERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLID 230 (1013)
T ss_pred ccccchhhhhhhh-hcCCHHHH--------HHHHHHHHHHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEE
Confidence 210 011111000 01111111 11222233333211 1 134677899999999999998532 3468999
Q ss_pred eecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 016788 255 FEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLFWALWAL 334 (382)
Q Consensus 255 fE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~ 334 (382)
|+.++++++.+|||..+..++. + ...| .+....|+++|.+.. | ++..|+..|+ .+..+..+.-.+|+.
T Consensus 231 FgDa~~~~~v~DLAialay~~~---~-~~~p-~~~~~a~laGY~sv~-p--Lt~~E~~~L~----~li~~R~~~s~~~~~ 298 (1013)
T PRK06148 231 FGDAVHAPRICEVAIAAAYAIL---D-HPDP-IGAAAALVAGYHAVY-P--LQAQELDLLF----DLIRMRLAVSVTNSA 298 (1013)
T ss_pred CcccccccHHHHHHHHHHHHhc---C-CCCh-HHHHHHHHHHHhhcC-C--CCHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 9999999999999998754331 1 1112 235678999998764 3 6778888776 334444445555666
Q ss_pred HhcccCCCCcchHHH
Q 016788 335 IQAKMSPIDFDYLGY 349 (382)
Q Consensus 335 ~q~~~~~~~fdy~~y 349 (382)
.|+...|.+ +|+.-
T Consensus 299 ~~~~~~P~n-~Y~~~ 312 (1013)
T PRK06148 299 SRREQTPDN-PYLAI 312 (1013)
T ss_pred HhhhcCCCC-hhhhh
Confidence 666666655 65543
No 35
>PLN02756 S-methyl-5-thioribose kinase
Probab=99.75 E-value=6.3e-16 Score=148.95 Aligned_cols=221 Identities=17% Similarity=0.214 Sum_probs=135.1
Q ss_pred hHHHHHHHHHhcCCCCCC---CCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC-------cccch-HHH
Q 016788 42 TPRVIALCKDLFKQWSKL---DDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD-------IVINR-QRE 110 (382)
Q Consensus 42 ~~~~~~~~~~~~~~W~~~---~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~-------~~idr-~~E 110 (382)
.+.+..++++. +.|... ....+++++++||.+|.+|+|+..++ ++|||...+... +..+| ..|
T Consensus 11 ~~~l~~yl~~~-~~~~~~l~g~~~~l~~~eiggGn~N~VyrV~~~~~-----svVVKqa~p~~r~vga~wpl~~~R~~~E 84 (418)
T PLN02756 11 EKSLVEYIKAT-PALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSSSG-----SFVIKQALPYIRCIGESWPMTKERAYFE 84 (418)
T ss_pred HHHHHHHHHHc-cchhhhcCCCCCCceEEEcCCCceeeEEEEEcCCc-----cEEEEeCCccccCCCccccCCccHHHHH
Confidence 36677777776 333221 12457899999999999999998544 699999874322 12333 455
Q ss_pred HHHHHHHHhC--CCCceEEEEeCC--ceEEEeecC--CcCCcc---ccCChHHHHHHHHHHHHH--hcccCCCCCCCcch
Q 016788 111 LQAIKYLSAA--GFGAKLLAVFGN--GMVQSFINA--RTLTPA---DMRNPKLAAEIAKQLRRF--HQVEIPGSKEPQLW 179 (382)
Q Consensus 111 ~~~l~~l~~~--gl~P~~~~~~~~--g~i~e~i~G--~~l~~~---~~~~~~~~~~ia~~La~l--H~~~~~~~~~p~~~ 179 (382)
...|+.+.+. ...|++|+++++ ..++||++| ..+... ....|....+++..|++. |+.+.-.... ...
T Consensus 85 a~aL~~~~~~~p~~VPkVy~~ded~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd~~~~~~-~kk 163 (418)
T PLN02756 85 ATALREHGRLCPDHVPEVYHFDRTMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSLLYHDTT-EHK 163 (418)
T ss_pred HHHHHHhhhcCCCCCCeEEEECCCCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcchhccChh-hhh
Confidence 6666666543 456999999874 379999987 344332 223478899999999987 3322111000 000
Q ss_pred hhHHHHH-HH-h----c----cCCCCcHHHhhcc----cc-----cCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCc
Q 016788 180 NDVSKFF-EK-A----S----SLKFDEIEKQSMY----ET-----ISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGN 240 (382)
Q Consensus 180 ~~~~~~~-~~-~----~----~~~~~~~~~~~~~----~~-----~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~N 240 (382)
..+..|. +. + + +.+|.+....... .. ..-..|..++.+|+..+ .....+|+|||+|+||
T Consensus 164 ~~~~~f~~N~elc~itEdlvFt~Py~~~~~n~~~~p~l~~~~~~l~~d~~L~~~v~~Lk~~f--~~~~~~L~HGDl~~g~ 241 (418)
T PLN02756 164 RAVAEFCGNVELCRLTEQVVFSDPYKVSQYNRWTSPYLDRDAEAVREDNILKLEIAELKSMF--CERAQALVHGDLHTGS 241 (418)
T ss_pred HHHHHhcCCHHHHHHHHhheeccccccchhcCCCCcchHHHHHHHhcCHHHHHHHHHHHHHH--HhcccceeecCCCCCc
Confidence 0011111 00 0 0 0111111110000 00 01234555666666554 3566899999999999
Q ss_pred eeeeCCCCCEEEEEeecCCCCCchhhHHhhhhh
Q 016788 241 IMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSE 273 (382)
Q Consensus 241 iL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e 273 (382)
|++++ +.+.+||.|+|.+||++||||.++..
T Consensus 242 i~~~~--~~~~~id~ef~~~g~~~~d~g~~~~~ 272 (418)
T PLN02756 242 VMVTP--DSTQVIDPEFAFYGPMGFDIGAFLGN 272 (418)
T ss_pred EEEcC--CCceEecchhhccCchHHhHHHHHhh
Confidence 99974 55999999999999999999997644
No 36
>PRK06149 hypothetical protein; Provisional
Probab=99.73 E-value=1.9e-15 Score=162.98 Aligned_cols=291 Identities=11% Similarity=0.140 Sum_probs=177.0
Q ss_pred CCCCcc-hHHHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHH
Q 016788 36 LSLPLM-TPRVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAI 114 (382)
Q Consensus 36 ~~~~~~-~~~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l 114 (382)
.+.|.+ .+.+..++.++++- . -++.++ +|..|.+|+|+..++ +||+|++.+... ......|..++
T Consensus 12 ~~~p~ls~~~~~~ll~~~ygl----~---~~~~~L-~s~~d~nf~v~t~~~-----~yVLKi~~~~~~-~~~l~~e~~~l 77 (972)
T PRK06149 12 LPAPDVSEAQAERILAEHYGL----S---GTLTEL-GSQQDRNFRVDSDGG-----RFVLKICHAAYA-AVELEAQHAAL 77 (972)
T ss_pred CCCCCCCHHHHHHHHHHhcCC----c---eEEEec-CCcCcceEEEEecCC-----cEEEEeCCccCC-hHHHHHHHHHH
Confidence 334443 35666666666442 1 246777 566799999998765 699999976422 22456788899
Q ss_pred HHHHhC--CCC-ceEEEEe----------C-Cc---eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCC---
Q 016788 115 KYLSAA--GFG-AKLLAVF----------G-NG---MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSK--- 174 (382)
Q Consensus 115 ~~l~~~--gl~-P~~~~~~----------~-~g---~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~--- 174 (382)
++|++. |++ |+++... + ++ ++++|++|+++.......+..+.++|+.+++||........
T Consensus 78 ~hL~~~~~glpvp~pi~t~~G~~~~~~~~~g~~~~vrL~~~l~G~~~~~~~~~~~~~~~~lG~~lArlh~al~~f~hp~~ 157 (972)
T PRK06149 78 RHLAEREPALRVPVVIPALDGEELLTLDVRGQGLRVRLLDYLPGQPLTRLGHLAPASVAGLGALCARVARALADFDHPGL 157 (972)
T ss_pred HHHHhhCCCCCCceeeECCCCCeEEEEecCCceEEEEEEEecCCccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 999987 885 8777421 1 12 58999999887653223677899999999999996542211
Q ss_pred -CCcchhh--HHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhcc--cCCCeeeeccCCCCCceeeeCCC--
Q 016788 175 -EPQLWND--VSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAGH--LNAPVVFSHNDLLSGNIMVNDEQ-- 247 (382)
Q Consensus 175 -~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~--~~~~~vl~H~Dl~~~NiL~~~~~-- 247 (382)
....|.- ....+..+.. ...+...+ ..+.+.+..+.+.+.. ...+..+||||++..|||+++++
T Consensus 158 ~r~~~Wdl~~~~~~~~~ll~-~i~d~~~r--------~~l~~~~~~~~~~l~~~~~~L~~g~IH~Dl~~~Nilv~~~~~~ 228 (972)
T PRK06149 158 DRTLQWDLRHAGPVVAHLLS-HITDPAQR--------ARIAEATRDAARRLQPLAPALPLQAVHLDITDDNVVGSRDADG 228 (972)
T ss_pred CCccccchhhhHHHHHHHHh-hcCCHHHH--------HHHHHHHHHHHHHhhhhhhhCcccccCCCCCcccEEEcCCCCC
Confidence 1112331 0000111100 00111111 1122223333322221 34578899999999999997532
Q ss_pred --CCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhh
Q 016788 248 --EKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLAS 325 (382)
Q Consensus 248 --~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~ 325 (382)
...+||||+.++++++.+|||..++.++.. .. +.+.....|+++|.+.. | ++..|+..|+ .+..+.
T Consensus 229 ~~~v~giIDFgD~~~~~~i~DLAial~~~~~~---~~--~dp~~~~~~l~GY~svr-p--Lt~~E~~~L~----~li~~R 296 (972)
T PRK06149 229 RWQPDGVIDFGDLVRTWRVADLAVTCASLLHH---AG--GDPFSILPAVRAYHAVR-P--LSEAELKALW----PLVVAR 296 (972)
T ss_pred CcceeEEEEcccchhhhHHHHHHHHHHHHhcc---cC--CCHHHHHHHHHHHHhcC-C--CCHHHHHHHH----HHHHHH
Confidence 235999999999999999999988766521 11 12334578999998764 3 6788888776 334444
Q ss_pred hhHHHHHHHHhcccCCCCcchHHHHHHHHHHHHHHHHHHH
Q 016788 326 HLFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQKEMCV 365 (382)
Q Consensus 326 ~l~W~lWa~~q~~~~~~~fdy~~y~~~R~~~y~~~k~~~~ 365 (382)
.+.-..|+..|+...|.+ + |........++..+.+.
T Consensus 297 ~~~~~~~~~~~~~~~p~n-~---Y~~~~~~~~w~~l~~~~ 332 (972)
T PRK06149 297 AAVLVASSEQQLAVDPDN-A---YVRDNLAHEWEIFDVAT 332 (972)
T ss_pred HHHHHHHHHHHhhhCCCC-h---hhhhccHHHHHHHHHHH
Confidence 455556666666665544 4 44444455555554443
No 37
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=99.68 E-value=2.3e-15 Score=142.64 Aligned_cols=199 Identities=21% Similarity=0.250 Sum_probs=119.7
Q ss_pred EecceeeeeEEEEEecCCCCCCeeEEEEEcCCC-------CCcccch-HHHHHHHHHHHhC--CCCceEEEEeCCc--eE
Q 016788 68 TVSGGITNLLLKVTVKEESGNDVSVTVRLYGPN-------TDIVINR-QRELQAIKYLSAA--GFGAKLLAVFGNG--MV 135 (382)
Q Consensus 68 ~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~-------~~~~idr-~~E~~~l~~l~~~--gl~P~~~~~~~~g--~i 135 (382)
.++||..|.+|+|..+++ ++++|||...+- ....++| ..|..+|+.+++. +..|++|++++.- .|
T Consensus 2 EigdGnlN~VfrV~~~~g---~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~v 78 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEG---DRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVTV 78 (370)
T ss_pred cCCCCceEEEEEEEcCCC---CeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccccceeh
Confidence 468999999999997543 137998875432 2334455 5788888877763 4579999998643 79
Q ss_pred EEeecCC-cCCcc---ccCChHHHHHHHHHHHHHhcccCCCCCCCcchh-hHHHHHH--------H-hccCCCCcHHHhh
Q 016788 136 QSFINAR-TLTPA---DMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWN-DVSKFFE--------K-ASSLKFDEIEKQS 201 (382)
Q Consensus 136 ~e~i~G~-~l~~~---~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~-~~~~~~~--------~-~~~~~~~~~~~~~ 201 (382)
||+++.. .+... ....|..+..+|+.|++.|-.+..-...+.... ....|.+ . +-+..|.+. ...
T Consensus 79 MEdL~~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd~~~~~~~kk~l~~~f~N~eLc~itEdlvft~py~~~-~~n 157 (370)
T TIGR01767 79 MEDLSHHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSDYALEPKVKKALVAQFTNPELCDITERLVFTDPYFDH-DTN 157 (370)
T ss_pred HhhCccchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCHHHHHHHHHHhCCHHHHHHHHHhccccchhhh-hhh
Confidence 9999653 22111 113477899999999998754321111110000 0001100 0 001111110 000
Q ss_pred ccccc---------CHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhh
Q 016788 202 MYETI---------SFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFS 272 (382)
Q Consensus 202 ~~~~~---------~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~ 272 (382)
.+.+. ....+..++.+|+..+ .....++||||||++||++++ +.+.+||||+|.+|+++||||.+++
T Consensus 158 ~~~p~l~~~~~~l~~d~~l~~~v~~Lk~~f--~~~~~~llHGDl~~gNi~~~~--~~~~~iD~e~~~~G~~~~Dlg~~ia 233 (370)
T TIGR01767 158 DFEEELRPFVAKLRNDDSLKIEAAKLKHSF--LASAETLLHGDLHSGSIFVSE--HETKVIDPEFAFYGPIGFDIGQFIA 233 (370)
T ss_pred cCChhHHHHHHHHhcCHHHHHHHHHHHHhh--ccCcceeeeccCCcccEEEcC--CCCEEEcCcccccCchHhhHHHHHH
Confidence 11100 0123333344444332 345679999999999999974 4588999999999999999999876
Q ss_pred hc
Q 016788 273 EY 274 (382)
Q Consensus 273 e~ 274 (382)
++
T Consensus 234 nL 235 (370)
T TIGR01767 234 NL 235 (370)
T ss_pred HH
Confidence 64
No 38
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.59 E-value=3.9e-14 Score=118.51 Aligned_cols=144 Identities=26% Similarity=0.441 Sum_probs=106.7
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhC-CCCceEEEEeCC----ceEEEeec
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAA-GFGAKLLAVFGN----GMVQSFIN 140 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~-gl~P~~~~~~~~----g~i~e~i~ 140 (382)
++.+..|..|.+|++...+. .+++|+..+... ..+...|..+++.++.. ...|+++..... ..+++|++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~~-----~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~ 76 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKDE-----DYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIE 76 (155)
T ss_pred ceecccccccceEEEEecCC-----eEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecC
Confidence 46788999999999998664 699999866432 23457899999999887 445888877643 26999999
Q ss_pred CCcCCcc-ccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 141 ARTLTPA-DMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 141 G~~l~~~-~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
|..+... ....+.....+++.|+.+|....
T Consensus 77 g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~------------------------------------------------- 107 (155)
T cd05120 77 GETLDEVSEEEKEDIAEQLAELLAKLHQLPL------------------------------------------------- 107 (155)
T ss_pred CeecccCCHHHHHHHHHHHHHHHHHHhCCCc-------------------------------------------------
Confidence 9766431 00112334445555555554321
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhc
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEY 274 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~ 274 (382)
.+++|+|++++||++++ .+.+.+|||+.+.++++.+|++.+++.+
T Consensus 108 ---------~~i~H~Dl~~~Nil~~~-~~~~~l~Df~~~~~~~~~~d~~~~~~~~ 152 (155)
T cd05120 108 ---------LVLCHGDLHPGNILVDD-GKILGIIDWEYAGYGPPAFDLAAALLFN 152 (155)
T ss_pred ---------eEEEecCCCcceEEEEC-CcEEEEEecccccCCChHHHHHHHHHHh
Confidence 58999999999999985 5789999999999999999999987654
No 39
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=99.38 E-value=2.3e-11 Score=106.41 Aligned_cols=213 Identities=14% Similarity=0.212 Sum_probs=136.2
Q ss_pred Eecceee-eeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC-ceEEEEeCC-c---eEEEeecC
Q 016788 68 TVSGGIT-NLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG-AKLLAVFGN-G---MVQSFINA 141 (382)
Q Consensus 68 ~l~gG~t-N~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~-P~~~~~~~~-g---~i~e~i~G 141 (382)
+++.|-| -.+|++...... -+.+|+-..... -....|...+++++..+++ |.|++...+ + ++++-++|
T Consensus 25 ~v~~geS~~~v~rl~a~~r~----g~~~k~~~~~~~--a~L~~Ea~RlrWla~~~l~~P~V~~~~~~~~~~wLl~salpG 98 (266)
T COG3231 25 RVTEGESGAGVFRLFADSRP----GLYLKIASSGPA--AELEGEAARLRWLAGQGLGCPRVLGLEDDADQAWLLMSALPG 98 (266)
T ss_pred eeeccCCCCeEEEEeccCCC----ceEEEEecCcch--hhhhhHHHHHHHhcccCCCCCceEeeccCcchhHHhhhhcCC
Confidence 3434433 368888776553 578887654332 2447899999999999997 999998753 3 68999999
Q ss_pred CcCCccc--cCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhcc---CCCCcHHHhhccccc-CHHHHHHHH
Q 016788 142 RTLTPAD--MRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASS---LKFDEIEKQSMYETI-SFKEVQKEI 215 (382)
Q Consensus 142 ~~l~~~~--~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~l~~~~ 215 (382)
.++.... +.....+..+|+.|+.||.+++... |-.+ ++..++.++.. ....+. ..|.+. .-....+.+
T Consensus 99 ~~~s~~~~~~~p~r~v~~la~aLR~LH~l~~~aC--PFd~-rl~~rl~~a~~r~~a~~vde---sdfd~e~qgr~~~El~ 172 (266)
T COG3231 99 EDASHPRYALDPKRAVPLLAEALRRLHELPVEAC--PFDR-RLARRLAKARARVRAGLVDE---SDFDEERQGRTAEELF 172 (266)
T ss_pred CcccchhhcCCHHHHHHHHHHHHHHHhcCChhhC--Ccch-HHHHHHHHHHHHHhccCCCh---hhcChhhcCCCHHHHH
Confidence 8776544 3334567899999999999776432 3222 23344444321 011110 001000 001122333
Q ss_pred HHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHHH
Q 016788 216 VELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFR 295 (382)
Q Consensus 216 ~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~ 295 (382)
..|+... ......|+||||...-|+|+++ ....++||+...|.+|+..||+...-.. .++ ++.......|+.
T Consensus 173 d~L~~~r-p~~edLVv~HGDACLPN~i~d~-~rf~GfIDlGrlGVaDRh~DLala~~s~-~~n-----l~g~~~~~~fl~ 244 (266)
T COG3231 173 DELEARR-PAVEDLVVTHGDACLPNFILDG-WRFSGFIDLGRLGVADRHQDLALATWSL-RFN-----LGGDVWDDPFLD 244 (266)
T ss_pred HHHHhcC-CchhhceeecCcccCcceEecC-CceEEeeecCcccchHHHHhHHHHHHHH-Hhc-----cCcchhhHHHHH
Confidence 4443332 3456789999999999999974 5678999999999999999999653221 111 234455788999
Q ss_pred HhcCC
Q 016788 296 HYLRP 300 (382)
Q Consensus 296 ~Y~~~ 300 (382)
.|...
T Consensus 245 ~Yg~~ 249 (266)
T COG3231 245 AYGRG 249 (266)
T ss_pred HhCcC
Confidence 99853
No 40
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=99.37 E-value=2e-11 Score=119.49 Aligned_cols=267 Identities=13% Similarity=0.178 Sum_probs=144.1
Q ss_pred chHHHHHHHHHhcCCCCCCCCCCeEEEEec--ceeeeeEEEEEecCC-----CCCCeeEEEEEcCCCC------------
Q 016788 41 MTPRVIALCKDLFKQWSKLDDSRFSVDTVS--GGITNLLLKVTVKEE-----SGNDVSVTVRLYGPNT------------ 101 (382)
Q Consensus 41 ~~~~~~~~~~~~~~~W~~~~~~~~~i~~l~--gG~tN~~y~v~~~~~-----~~~~~~~vlRi~~~~~------------ 101 (382)
....|...+++.+..=..+ .++..++.|+ .|....+.+|+..-. ..-+.++||||+....
T Consensus 14 tw~dve~~l~~~l~t~a~~-g~~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~~~~~~~~~~~~~ 92 (414)
T PF07914_consen 14 TWEDVEEALQEALGTKAKF-GENKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLALRALSENMKFEG 92 (414)
T ss_pred eHHHHHHHHHHHhCCCcCc-CCCcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEeccHhhHHHHHHhhcccc
Confidence 3455666666655431112 2345666664 477889999986533 1125689999985310
Q ss_pred Ccccch---------------HHHHHHHHHHHhC---CCC-ceEEEEe----C---Cc-eEEEeecCC-cCCccccCChH
Q 016788 102 DIVINR---------------QRELQAIKYLSAA---GFG-AKLLAVF----G---NG-MVQSFINAR-TLTPADMRNPK 153 (382)
Q Consensus 102 ~~~idr---------------~~E~~~l~~l~~~---gl~-P~~~~~~----~---~g-~i~e~i~G~-~l~~~~~~~~~ 153 (382)
...++- .+|....+.+... +++ |++|+.- + .| +++||+++. ..+.-+--.++
T Consensus 93 ~~~~~~e~~~~~~~~~l~~~HNrEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~~~~~~~e~~~~e 172 (414)
T PF07914_consen 93 GKGFDEEKEWEEFEKFLREMHNREVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVENVHSMDMYENLSVE 172 (414)
T ss_pred ccccchhhHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccCCceeecccCCCCHH
Confidence 000110 2355556666654 454 9999752 1 25 689999883 33322222345
Q ss_pred HHHHHHHHHHHHhcccCCCCC------CCcchhhHHHHHHHhccC-CCCcH--HHhhcccccCHHHHHHHHHHHHHH---
Q 016788 154 LAAEIAKQLRRFHQVEIPGSK------EPQLWNDVSKFFEKASSL-KFDEI--EKQSMYETISFKEVQKEIVELKEL--- 221 (382)
Q Consensus 154 ~~~~ia~~La~lH~~~~~~~~------~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~l~~~~~~l~~~--- 221 (382)
-+.++++.||+||+.....+. .+..| +..++...... ..... ..+........+.+.+.++.+...
T Consensus 173 ql~~iv~aLA~~~A~sl~ls~ee~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~~~~~~ 250 (414)
T PF07914_consen 173 QLLQIVRALAKFHALSLKLSEEEKKSISGPDF--LEEMFGEFFSEEGMKKIFENLRKIFGFFSPEKLEELIEKFEHYLPD 250 (414)
T ss_pred HHHHHHHHHHHHHHhHccCCHHHhhhccCchH--HHHHHHHHhchHHHHHHHHHHHhhccccChHHHHHHHHHHHHhccc
Confidence 588999999999997754221 11111 01111111100 00000 000000000112232333322221
Q ss_pred ----------hcccCCCeeeeccCCCCCceeeeCCCC----CEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCH
Q 016788 222 ----------AGHLNAPVVFSHNDLLSGNIMVNDEQE----KLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNK 287 (382)
Q Consensus 222 ----------~~~~~~~~vl~H~Dl~~~NiL~~~~~~----~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~ 287 (382)
-...+.+.||||||+|..|||++.+++ ...||||..++.|.|+.||+.++...+.-. | ..
T Consensus 251 ~~~~~~~~~i~~~lG~~~VL~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~~eDl~Rll~~~lS~e-d-----RR 324 (414)
T PF07914_consen 251 IKNFEKASNINKQLGIKPVLVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSPAEDLARLLVSCLSGE-D-----RR 324 (414)
T ss_pred HHhHHHHhhhHHhcCCCcceecCCccHHheeeecCCchhHHHHHHHHHHHhhcCchHHHHHHHHHhcCCHH-H-----HH
Confidence 112455889999999999999986444 368999999999999999999986543100 0 11
Q ss_pred HHHHHHHHHhcC----CC---CCCCCCHHHHHHHHH
Q 016788 288 DEQNHFFRHYLR----PD---KPEEVSDQDLEVLYV 316 (382)
Q Consensus 288 ~~~~~fl~~Y~~----~~---~~~~~~~~e~~~l~~ 316 (382)
+..+.+|+.|.. .. .....|.+++...|.
T Consensus 325 ~~~~~lL~~Yy~~f~~~l~~~~~~PfT~eqL~~sY~ 360 (414)
T PF07914_consen 325 EHTEELLEYYYDTFTEALEDGGKAPFTLEQLKDSYR 360 (414)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHH
Confidence 122344554432 11 123467888887774
No 41
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.34 E-value=2.3e-11 Score=107.70 Aligned_cols=163 Identities=19% Similarity=0.261 Sum_probs=104.2
Q ss_pred ecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--ccc-------chHHHHHHHHHHHhCCCC-ceEEEEeCC--ceEE
Q 016788 69 VSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVI-------NRQRELQAIKYLSAAGFG-AKLLAVFGN--GMVQ 136 (382)
Q Consensus 69 l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~i-------dr~~E~~~l~~l~~~gl~-P~~~~~~~~--g~i~ 136 (382)
|..|.+..+|++...+. ++++|+..+... ... ...+|.+++..+...++. |.++....+ .+|+
T Consensus 2 ig~G~~~~vy~~~~~~~-----~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 76 (199)
T TIGR03724 2 IAKGAEAIIYLGDFLGL-----KAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVM 76 (199)
T ss_pred CCCCceEEEEEeecCCc-----cEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE
Confidence 45677889999985443 688888543321 011 124688899999988864 888887655 3799
Q ss_pred EeecCCcCCccccCCh-HHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHH
Q 016788 137 SFINARTLTPADMRNP-KLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEI 215 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~-~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (382)
+|++|.++........ .++.+++..|+.+|.
T Consensus 77 e~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~------------------------------------------------ 108 (199)
T TIGR03724 77 EYIEGKPLKDVIEEGNDELLREIGRLVGKLHK------------------------------------------------ 108 (199)
T ss_pred EEECCccHHHHHhhcHHHHHHHHHHHHHHHHH------------------------------------------------
Confidence 9999976642110000 223333333333332
Q ss_pred HHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCC-CCHHHHHHHH
Q 016788 216 VELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLY-PNKDEQNHFF 294 (382)
Q Consensus 216 ~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~-p~~~~~~~fl 294 (382)
..++|+|++|+||+++ ++.+.+|||+.+..+++..|.+..+..+..... .... ..++....|+
T Consensus 109 -------------~gi~H~Dl~~~Nil~~--~~~~~liDfg~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~fl 172 (199)
T TIGR03724 109 -------------AGIVHGDLTTSNIIVR--DDKLYLIDFGLGKYSDEIEDKAVDLHVLKRSLE-STHPDKAEELFEAFL 172 (199)
T ss_pred -------------CCeecCCCCcceEEEE--CCcEEEEECCCCcCCCcHHhhhchHHHHHHHHh-hhCchhHHHHHHHHH
Confidence 2479999999999997 578999999999999999988754422211000 1111 1345677899
Q ss_pred HHhcCC
Q 016788 295 RHYLRP 300 (382)
Q Consensus 295 ~~Y~~~ 300 (382)
++|...
T Consensus 173 ~~Y~~~ 178 (199)
T TIGR03724 173 EGYREE 178 (199)
T ss_pred HHHHhh
Confidence 999864
No 42
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.33 E-value=4.7e-11 Score=106.65 Aligned_cols=184 Identities=14% Similarity=0.155 Sum_probs=109.3
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc---c------cchHHHHHHHHHHHhCCCC-ceEEEEeCC--ce
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI---V------INRQRELQAIKYLSAAGFG-AKLLAVFGN--GM 134 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~---~------idr~~E~~~l~~l~~~gl~-P~~~~~~~~--g~ 134 (382)
..|..|....+|++...+. ++++|+..+.... . ....+|..++..+...++. |.++....+ .+
T Consensus 2 ~~l~~G~~~~vy~~~~~~~-----~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l 76 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGI-----KAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFII 76 (211)
T ss_pred cccccCceEEEEEEeeCCC-----ceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEE
Confidence 4567788889999976443 6888875443211 0 1235688888888888875 788766543 26
Q ss_pred EEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHH
Q 016788 135 VQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKE 214 (382)
Q Consensus 135 i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (382)
+++|++|.++... +.. + .+ ....... .+...
T Consensus 77 v~e~~~G~~L~~~--------------~~~-~--------~~----~~~~i~~----------------------~i~~~ 107 (211)
T PRK14879 77 VMEYIEGEPLKDL--------------INS-N--------GM----EELELSR----------------------EIGRL 107 (211)
T ss_pred EEEEeCCcCHHHH--------------HHh-c--------cH----HHHHHHH----------------------HHHHH
Confidence 9999999765321 000 0 00 0001111 11111
Q ss_pred HHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCc-cccCCCCCCCHHHHHHH
Q 016788 215 IVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAG-YDCDYSLYPNKDEQNHF 293 (382)
Q Consensus 215 ~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~-~~~~~~~~p~~~~~~~f 293 (382)
+..+. ...++|+|++|+|||++ ++.+.+|||+.+..+++.+|.+.-+..+.. +...... ...+....|
T Consensus 108 l~~lH--------~~~i~H~Dl~p~Nil~~--~~~~~liDf~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~f 176 (211)
T PRK14879 108 VGKLH--------SAGIIHGDLTTSNMILS--GGKIYLIDFGLAEFSKDLEDRAVDLHVLLRSLESTHPD-WAEELFEAF 176 (211)
T ss_pred HHHHH--------hCCcccCCCCcccEEEE--CCCEEEEECCcccCCCcHHhhhccHHHHHHHhhccCcc-hHHHHHHHH
Confidence 11111 12579999999999997 578999999999999999988764432210 1001111 123567889
Q ss_pred HHHhcCCCCCCCCCHHHHHHHHHHH
Q 016788 294 FRHYLRPDKPEEVSDQDLEVLYVEA 318 (382)
Q Consensus 294 l~~Y~~~~~~~~~~~~e~~~l~~~v 318 (382)
+++|.... ..+..++...+.++
T Consensus 177 ~~gY~~~~---~~~~~~~~~~~~~i 198 (211)
T PRK14879 177 LEGYREVM---GEKAEEVLERVKEI 198 (211)
T ss_pred HHHHHHhh---cccHHHHHHHHHHH
Confidence 99998643 23445555544433
No 43
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=99.32 E-value=9.3e-11 Score=107.17 Aligned_cols=187 Identities=18% Similarity=0.253 Sum_probs=120.7
Q ss_pred EecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHH---HHHHHHHhCCCCceEEEEeCC-c-eEEEee-cC
Q 016788 68 TVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQREL---QAIKYLSAAGFGAKLLAVFGN-G-MVQSFI-NA 141 (382)
Q Consensus 68 ~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~---~~l~~l~~~gl~P~~~~~~~~-g-~i~e~i-~G 141 (382)
++.+|.++.++.|...++. +.|+|+..+..+. ..|. ..|+.....|. .+++..++. | ++.|++ +|
T Consensus 9 ~~~~g~~s~V~pv~~~dG~----~avLKl~~p~~~~----~~E~~g~~~L~~w~G~Ga-Vrll~~d~~~~AlLLErl~~g 79 (253)
T PF04655_consen 9 PPAHGSSSLVVPVRRADGT----PAVLKLAPPHAEA----EHEARGEAALRWWNGRGA-VRLLAADPERGALLLERLDPG 79 (253)
T ss_pred CCCCCcceEEEEEEcCCCC----eEEEEecCCcccc----hhhhhHHhHhheeCCCCc-eeeeccccccchhhhhhccCC
Confidence 5678999999999988764 8999999875432 2444 44665555553 589988743 3 788999 77
Q ss_pred CcCCcccc--CChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 142 RTLTPADM--RNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 142 ~~l~~~~~--~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
++|..-.. .+.+-...++..|++||...... .|..+..+.+|+..+.... ...... ....+......+.
T Consensus 80 ~~L~~~~~~g~d~~a~~i~a~l~~~L~~~~~~~--~p~~l~~l~~~~~~l~~~~------~~~~~~-~~~~l~~~a~~~~ 150 (253)
T PF04655_consen 80 RSLASLPREGDDDEATRIAAGLLRRLHRPAPEP--LPSGLPPLADWFARLFARA------RERAGA-PPRRLVDAAAALA 150 (253)
T ss_pred CchhhcccccCchHHHHHHHHHHHHHhCCCCCC--CCccchhHHHHHHHHHHHh------Hhhhcc-ccHHHHHHHHHHH
Confidence 87753221 24556788999999999875421 2222334455554443110 000000 1122322222222
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhc
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEY 274 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~ 274 (382)
+.+.....+.+++|||||++|||-.. ...-..||.. ...|+|+||++++|...
T Consensus 151 ~~Ll~~~~~~~lLHGDLH~~NIL~~~-~~~WlaIDPk-gl~Gdp~yd~a~~l~n~ 203 (253)
T PF04655_consen 151 RELLASPGEEVLLHGDLHHGNILAAG-RRGWLAIDPK-GLVGDPAYDLAPLLRNP 203 (253)
T ss_pred HHHhcCCCcceeeccccchHhhhccC-CCCceEeCCc-ccccccccCHHHHHhCc
Confidence 22323456679999999999999763 3668999998 88999999999998653
No 44
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=99.27 E-value=1.7e-10 Score=108.74 Aligned_cols=224 Identities=18% Similarity=0.254 Sum_probs=118.7
Q ss_pred ceeeeeEEEEEecC-----CCCCCeeEEEEEcCCCCC--cc----cchHHHHHHHHHHHh--------C----CCCceEE
Q 016788 71 GGITNLLLKVTVKE-----ESGNDVSVTVRLYGPNTD--IV----INRQRELQAIKYLSA--------A----GFGAKLL 127 (382)
Q Consensus 71 gG~tN~~y~v~~~~-----~~~~~~~~vlRi~~~~~~--~~----idr~~E~~~l~~l~~--------~----gl~P~~~ 127 (382)
.|....+|+|+... +...+.++|||....... .. .--.+|..+.+.+.. . ...|+++
T Consensus 3 d~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~~ 82 (294)
T PF02958_consen 3 DNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKCY 82 (294)
T ss_pred CcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceEE
Confidence 46667788887643 122345899999863221 11 112567766654432 1 2359999
Q ss_pred EEeC--C--ceEEEeec--C-CcCCccccCChHHHHHHHHHHHHHhcccCCCC-CCCc--------ch-----hh-HHHH
Q 016788 128 AVFG--N--GMVQSFIN--A-RTLTPADMRNPKLAAEIAKQLRRFHQVEIPGS-KEPQ--------LW-----ND-VSKF 185 (382)
Q Consensus 128 ~~~~--~--g~i~e~i~--G-~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~-~~p~--------~~-----~~-~~~~ 185 (382)
+... + -+|+|-+. | +..+....-+.+.+..+.+.||+||+...... ..|. .+ .. ...+
T Consensus 83 ~~~~~~~~~~lvlEDL~~~g~~~~~~~~~l~~~~~~~~l~~LA~fHA~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
T PF02958_consen 83 YADEDPGDEVLVLEDLSEKGYRMGDRRDGLDLEHAELVLKKLAKFHAASWALEEKDPELFEELSSGLFEEPFFREELEEW 162 (294)
T ss_pred EeccCCCceeeehhhhhhcCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhCchhhhhccccceeccchhhhhhHH
Confidence 8762 1 26788773 4 33333223355668999999999999653110 0010 00 00 0111
Q ss_pred HHHhccCCCCc--HHHhhccccc-----CHHHHHH-HHHHHHHHh-cccCCCeeeeccCCCCCceeeeCCCC----CEEE
Q 016788 186 FEKASSLKFDE--IEKQSMYETI-----SFKEVQK-EIVELKELA-GHLNAPVVFSHNDLLSGNIMVNDEQE----KLYL 252 (382)
Q Consensus 186 ~~~~~~~~~~~--~~~~~~~~~~-----~~~~l~~-~~~~l~~~~-~~~~~~~vl~H~Dl~~~NiL~~~~~~----~~~l 252 (382)
........+.. .......... ....+.. .++.+.... .......|+||||+|.+|||+..++. .+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~vl~HGD~w~nNilf~~~~~g~~~~~~l 242 (294)
T PF02958_consen 163 FEEFFEQGLKAFIESLDDEWPEYEEYSEKLEALLDKFFERMQELVDPSKEPFNVLCHGDFWTNNILFKYDDDGKPIDVVL 242 (294)
T ss_pred HHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHhccccCCceEEEcCccCHHhEeEcccccccccccee
Confidence 11110000000 0000000000 0111111 122222333 23456789999999999999975332 5999
Q ss_pred EEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHHHHhcCC
Q 016788 253 IDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRHYLRP 300 (382)
Q Consensus 253 IDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~ 300 (382)
|||..+++|+|+.||+.++....... . ..+....+++.|...
T Consensus 243 iDfQ~~~~g~p~~Dl~~fl~~s~~~~-----~-r~~~~~~ll~~Y~~~ 284 (294)
T PF02958_consen 243 IDFQLARYGSPAIDLAYFLYTSLDPE-----L-RREHEDELLRHYHES 284 (294)
T ss_pred eccccccCCCcHhHHHHHHHHCCCHH-----H-HHHHHHHHHHHHHHH
Confidence 99999999999999999986532100 0 123456677777653
No 45
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.26 E-value=2e-10 Score=98.24 Aligned_cols=164 Identities=18% Similarity=0.293 Sum_probs=108.5
Q ss_pred EecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC--Ccccc-------hHHHHHHHHHHHhCCCC-ceEEEEeCCc--eE
Q 016788 68 TVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT--DIVIN-------RQRELQAIKYLSAAGFG-AKLLAVFGNG--MV 135 (382)
Q Consensus 68 ~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~--~~~id-------r~~E~~~l~~l~~~gl~-P~~~~~~~~g--~i 135 (382)
.+..|..+.+|....-+. ++|+|.--+.. ..-+| -.+|++++..+...|++ |.++.++++. ++
T Consensus 3 ~i~~GAEa~i~~~~~~g~-----~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~ 77 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGL-----PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIV 77 (204)
T ss_pred hhhCCcceeEEeeeccCc-----ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEE
Confidence 345677778887766543 47776543322 11112 16799999999999996 9999998754 79
Q ss_pred EEeecCCcCCcc-ccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHH
Q 016788 136 QSFINARTLTPA-DMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKE 214 (382)
Q Consensus 136 ~e~i~G~~l~~~-~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (382)
+|||+|..+... +...+.++.++|+.+++||.
T Consensus 78 me~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~----------------------------------------------- 110 (204)
T COG3642 78 MEYIEGELLKDALEEARPDLLREVGRLVGKLHK----------------------------------------------- 110 (204)
T ss_pred EEEeCChhHHHHHHhcchHHHHHHHHHHHHHHh-----------------------------------------------
Confidence 999999876421 11123445555555555543
Q ss_pred HHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcC-ccccCCCCCCCHHHHHHH
Q 016788 215 IVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYA-GYDCDYSLYPNKDEQNHF 293 (382)
Q Consensus 215 ~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~-~~~~~~~~~p~~~~~~~f 293 (382)
..+|||||.+.||++. ++.+++|||..+.+++-.-|.|.=+.-+- ...+ +....++....|
T Consensus 111 --------------~givHGDLTtsNiIl~--~~~i~~IDfGLg~~s~~~Ed~aVDl~Vleral~s--th~~~e~l~~~f 172 (204)
T COG3642 111 --------------AGIVHGDLTTSNIILS--GGRIYFIDFGLGEFSDEVEDKAVDLHVLERALES--THEKAEELFAAF 172 (204)
T ss_pred --------------cCeecCCCccceEEEe--CCcEEEEECCcccccccHHhhhchHHHHHHHHHh--ccccHHHHHHHH
Confidence 2569999999999997 45699999999999987777765221110 0111 122245678899
Q ss_pred HHHhcCCC
Q 016788 294 FRHYLRPD 301 (382)
Q Consensus 294 l~~Y~~~~ 301 (382)
+++|.+..
T Consensus 173 ~~gY~~~~ 180 (204)
T COG3642 173 LEGYREEF 180 (204)
T ss_pred HHHHHHHh
Confidence 99998764
No 46
>COG4857 Predicted kinase [General function prediction only]
Probab=99.20 E-value=5.9e-11 Score=106.87 Aligned_cols=205 Identities=20% Similarity=0.223 Sum_probs=114.6
Q ss_pred CCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEc-------CCCCCcccch-HHHHHHHHHHHh--CCCCceEEEEeC
Q 016788 62 SRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLY-------GPNTDIVINR-QRELQAIKYLSA--AGFGAKLLAVFG 131 (382)
Q Consensus 62 ~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~-------~~~~~~~idr-~~E~~~l~~l~~--~gl~P~~~~~~~ 131 (382)
..++++.|..|.-|.+|.|+...+. +..|+|.. |..-...++| ..|+.++..-.+ .++.|+++++++
T Consensus 31 s~ltvkEIGDGNlNyvF~V~~~~~~---ka~ivKQA~py~r~vGeswPL~l~Rs~iE~~aL~rq~~~aPh~VPeIyf~De 107 (408)
T COG4857 31 SHLTVKEIGDGNLNYVFIVEGKIGG---KAAIVKQALPYVRLVGESWPLPLKRSFIEYHALRRQNARAPHFVPEIYFFDE 107 (408)
T ss_pred cceEEEEecCCceeEEEEEecCCCC---eehhhhhhhhHHHhcCCcCCCcchHHHHHHHHHHHhhccCCCCcceeEeecc
Confidence 5689999999999999999876552 35666653 3222233455 457766654333 467899998876
Q ss_pred Cc--eEEEeecC-CcCCc---cccCChHHHHHHHHHHHHHhcccCCCCCCCcch-hhHHHHHH-Hhc----cCCCCcHH-
Q 016788 132 NG--MVQSFINA-RTLTP---ADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLW-NDVSKFFE-KAS----SLKFDEIE- 198 (382)
Q Consensus 132 ~g--~i~e~i~G-~~l~~---~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~-~~~~~~~~-~~~----~~~~~~~~- 198 (382)
.- .+||++.- ..+.. +.-.-|.+...+|..|++---.....+..+... ..+..|-+ .+. .+.|.++-
T Consensus 108 ~mavivMEdls~~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~k~kK~~vk~FtNpELCDItE~LVFtdPyf 187 (408)
T COG4857 108 IMAVIVMEDLSPHKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTKDKKADVKLFTNPELCDITENLVFTDPYF 187 (408)
T ss_pred hhhhhhHhhhhHHHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccchHhHHHHHHHhCCchhhcchhceeecCccc
Confidence 43 57777632 11111 011125667788888876332221111111000 00111100 000 01111100
Q ss_pred --Hhhccc--c--------cCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhh
Q 016788 199 --KQSMYE--T--------ISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYD 266 (382)
Q Consensus 199 --~~~~~~--~--------~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~D 266 (382)
...+.. . ....++.-+..+|+..+ ......+||||||.|.|+++ +..+.+||.|+|.|||.+||
T Consensus 188 d~d~Nr~~~~~l~~fVe~L~~n~dlkvea~kLk~~F--~~~aetLiHGDLHsGSIfvt--e~etkvIDPEFaFYGPmafD 263 (408)
T COG4857 188 DADRNRHTIPQLDPFVEELRKNRDLKVEAQKLKHKF--MAYAETLIHGDLHSGSIFVT--EKETKVIDPEFAFYGPMAFD 263 (408)
T ss_pred cccccccccccchHHHHHHhcCcchhhhHHHHHHHH--HHHhHHHhccccccCcEEee--cCcceeeCccccccCcchhh
Confidence 000000 0 01123333444555443 23456899999999999997 46799999999999999999
Q ss_pred HHhhhhh
Q 016788 267 IGNHFSE 273 (382)
Q Consensus 267 la~~~~e 273 (382)
||+++..
T Consensus 264 iG~~iaN 270 (408)
T COG4857 264 IGMLIAN 270 (408)
T ss_pred HHHHHHH
Confidence 9998865
No 47
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=99.12 E-value=1.5e-08 Score=96.41 Aligned_cols=221 Identities=12% Similarity=0.144 Sum_probs=128.9
Q ss_pred eEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC--ceEEEEeC-------Cc---eEEEeecCCc
Q 016788 76 LLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG--AKLLAVFG-------NG---MVQSFINART 143 (382)
Q Consensus 76 ~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~--P~~~~~~~-------~g---~i~e~i~G~~ 143 (382)
.+.+|.+.++ .++|+.....+.. .......++..|+++|++ |+++..-. +| .|++|++|+.
T Consensus 20 ~~~~~~t~~g-----~y~Lk~~e~~~~~--~l~f~~~~~~~L~~~G~~~v~~~i~tk~G~~~~~~~g~~y~L~~w~~~~~ 92 (313)
T TIGR02905 20 RYEAFRANNQ-----AYLIVPVDGLEEE--ELAELMAMSDYLQQAGDETVLELVKTKFGQSSALIDGVSYYLFKAPEFNE 92 (313)
T ss_pred ceeeEEeCCc-----eEEEEEecCCCHH--HHHHHHHHHHHHHHcCCCcccceeecCCCCEeEEECCEEEEEEeCCCccc
Confidence 3666677776 6999988433221 124567788999999984 77775422 23 3677876653
Q ss_pred CCccccCChHHHHHHHHHHHHHhcccCCC--CC--CC--cch-hhHHHHHHHhccCCCCcHH----Hhhccccc---C--
Q 016788 144 LTPADMRNPKLAAEIAKQLRRFHQVEIPG--SK--EP--QLW-NDVSKFFEKASSLKFDEIE----KQSMYETI---S-- 207 (382)
Q Consensus 144 l~~~~~~~~~~~~~ia~~La~lH~~~~~~--~~--~p--~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~-- 207 (382)
.. + ..+|+.||+||...... .. .. .-| ..+.+..+++... .... ..+.++.. .
T Consensus 93 ~~-----~----~~~~~~LA~lH~as~~f~~~~~~~~~~~~~~~~~~k~~~el~~~--~~~~~~~~~~s~Fd~~fl~~~d 161 (313)
T TIGR02905 93 RR-----G----VDLGRELATFHKRGRQYPRPIWKKSRIGQWKELWAKRLDQLEDW--WQSLLAQGPQTLFDEQFLETFP 161 (313)
T ss_pred ch-----h----HHHHHHHHHHHHhcCCCCCCccccccccccHHHHHHHHHHHHHH--HHHHHhcCCCChHHHHHHHHhH
Confidence 11 1 28999999999976531 11 01 111 1122222222110 0000 00011100 0
Q ss_pred --HHHHHHHHHHHHH-Hh---cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcC-c-ccc
Q 016788 208 --FKEVQKEIVELKE-LA---GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYA-G-YDC 279 (382)
Q Consensus 208 --~~~l~~~~~~l~~-~~---~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~-~-~~~ 279 (382)
+......++.+.+ .+ .......++||||+..+|+| . ++...+|+|| +.++.|..||+.++...+ . ...
T Consensus 162 ~~~~~a~~ai~~l~~s~y~~~~~~~~~~~lCH~d~~~hn~l-~--~~~~~~i~~d-~~~D~~~~DL~~firk~~~k~~~~ 237 (313)
T TIGR02905 162 YYLGLTENAIQYAADTELDDEPGLADSGTICHERFGETTWL-E--RGGLIKPPTE-WVYDHPARDLAEWIRERYMGEIRQ 237 (313)
T ss_pred HHHHHHHHHHHHHHHccchhhhhccccCccccCccCccccc-c--CCCeEecccc-cccccchhHHHHHHHHHHHHhccc
Confidence 1111222222221 01 11224569999999999987 3 4678899999 459999999999988743 1 111
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHH
Q 016788 280 DYSLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLASHLFWAL 331 (382)
Q Consensus 280 ~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~l 331 (382)
+-+....+|++|.+.. | ++..|..-++ .+.++.+-+|-+
T Consensus 238 ------~~~~~~~~l~~Y~~~~-p--L~~~e~~~l~----~~L~FP~~fwk~ 276 (313)
T TIGR02905 238 ------NQRAIASFLQEYEQAA-P--LTPFSWRLMY----ARLLFPLHYFET 276 (313)
T ss_pred ------cHHHHHHHHHHhhhcC-C--CCHHHHHHHH----HHHcCcHHHHHH
Confidence 1235789999998764 3 6778887777 677888888876
No 48
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.08 E-value=2e-09 Score=96.83 Aligned_cols=88 Identities=7% Similarity=0.150 Sum_probs=59.5
Q ss_pred HHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC---Ccccch-------HHHHHHHH
Q 016788 46 IALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT---DIVINR-------QRELQAIK 115 (382)
Q Consensus 46 ~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~---~~~idr-------~~E~~~l~ 115 (382)
.++...++.+ ..-.++.+++|-.+.||.+....+ ++++|++.+.. +..+.+ ++|+..+.
T Consensus 22 ~~~~~~~l~~------~y~~~~~l~~~~f~~v~l~~~~~~-----~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~ 90 (232)
T PRK10359 22 KEIFDDFLSY------NIKTIKVFRNIDDTKVSLIDTDYG-----KYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTD 90 (232)
T ss_pred HHHHHHHhhC------ceEEEEEecCCCceEEEEEecCCC-----cEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHH
Confidence 4555555543 223567778888999999766432 79999997542 222222 57777889
Q ss_pred HHHhCCCC-ceEEEEeC----------CceEEEeecCCcC
Q 016788 116 YLSAAGFG-AKLLAVFG----------NGMVQSFINARTL 144 (382)
Q Consensus 116 ~l~~~gl~-P~~~~~~~----------~g~i~e~i~G~~l 144 (382)
.|...|+. |..++... ..+++||++|.++
T Consensus 91 rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL 130 (232)
T PRK10359 91 RVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVEL 130 (232)
T ss_pred HHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccH
Confidence 99889986 77765543 1269999999765
No 49
>KOG3021 consensus Predicted kinase [General function prediction only]
Probab=99.08 E-value=5.8e-09 Score=90.92 Aligned_cols=197 Identities=19% Similarity=0.304 Sum_probs=113.2
Q ss_pred eeEEEEEcCCCCCcccchHHHHHHHHHHHhCCC--CceEEEEe--CCc---eEEEeecCCcCCccccCChHHHHHHHHHH
Q 016788 90 VSVTVRLYGPNTDIVINRQRELQAIKYLSAAGF--GAKLLAVF--GNG---MVQSFINARTLTPADMRNPKLAAEIAKQL 162 (382)
Q Consensus 90 ~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl--~P~~~~~~--~~g---~i~e~i~G~~l~~~~~~~~~~~~~ia~~L 162 (382)
.+++||+.+.....++ +-|..-++.+.+.+. .|+++..- ++| +|+|+|+=+.+..+ ...+|+.|
T Consensus 36 G~~FvK~nr~~~~~mf--eGE~~sLeAi~sT~tv~vprpikvid~p~Ggs~lime~idf~~lr~~-------~a~lG~ql 106 (313)
T KOG3021|consen 36 GKVFVKVNRSIARDMF--EGELASLEAIQSTETVLVPRPIKVIDLPGGGSSLIMEHIDFQGLRSD-------AAKLGSQL 106 (313)
T ss_pred ccEEEEeccccchHHH--hhHHHHHHHHHhcCceecCCceeeEecCCCceeeeeehhhcccchhH-------HHHHHHHH
Confidence 3799999876443333 578888888877653 59888764 454 69999976655432 67899999
Q ss_pred HHHhccc-------------CCC---------------------CCCC--cchh-hHHHHHHHhccCCCCcHHHhhcccc
Q 016788 163 RRFHQVE-------------IPG---------------------SKEP--QLWN-DVSKFFEKASSLKFDEIEKQSMYET 205 (382)
Q Consensus 163 a~lH~~~-------------~~~---------------------~~~p--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (382)
|.||... +.. ...| +.|. +|..|+.+.+. ...-+...+.+.+
T Consensus 107 AdmHl~n~kl~e~r~~~~~tv~rgge~~e~~~v~~FGF~v~tccG~lpQvNdW~edW~eFf~rhRl-q~Qldl~~~~~~D 185 (313)
T KOG3021|consen 107 ADMHLKNEKLAEARRTEAGTVGRGGEEGEQIGVENFGFHVVTCCGRLPQVNDWQEDWEEFFARHRL-QPQLDLLEKTYGD 185 (313)
T ss_pred HHHhhhhHHHHHHHHHhccccccCcccccccchhccceeeeeecccCcccccchhhHHHHHHHHhh-hHHHHHHHHhhcc
Confidence 9999311 100 0112 2343 34444433221 0000000111110
Q ss_pred cCHHHHHHHHHH----HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCC
Q 016788 206 ISFKEVQKEIVE----LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDY 281 (382)
Q Consensus 206 ~~~~~l~~~~~~----l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~ 281 (382)
.++.+.... +...+....--+++.||||+.||+-.++ .+...|.|.- +.||++.||+|.... +-||
T Consensus 186 ---re~~el~~~L~~kia~Lf~~~eI~PaLlHGDLW~GNva~D~-~~ePiIfDPa-sfYgh~Efefgia~m-fGgf---- 255 (313)
T KOG3021|consen 186 ---REAFELWSILQTKIADLFKCLEILPALLHGDLWSGNVAEDG-AGEPIIFDPA-SFYGHSEFEFGIAKM-FGGF---- 255 (313)
T ss_pred ---HHHHHHHHHHHHhhHHHhccceeehhhhccccccCcccccC-CCCceEeCch-hhcCCcHHHHHHHHH-hCCC----
Confidence 111111111 2222222334468999999999987753 4668899986 789999999997532 1123
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 016788 282 SLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLY 315 (382)
Q Consensus 282 ~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~ 315 (382)
-+.|..+|.... |..+-.+....||
T Consensus 256 --------~~sF~naY~k~i-pka~G~eqR~~LY 280 (313)
T KOG3021|consen 256 --------TQSFYNAYHKKI-PKAPGFEQRLLLY 280 (313)
T ss_pred --------cHHHHHHHhhhc-CCCCcHHHHHHHH
Confidence 257999998764 4334445544454
No 50
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=99.03 E-value=5.6e-09 Score=95.07 Aligned_cols=210 Identities=15% Similarity=0.219 Sum_probs=119.6
Q ss_pred HHHHHHHHhCCCC-ceEEEEe-CCc-eEEEeecCCc-CCccccCChHHHHHHHHHHHHHhcccCCCC----C-----CCc
Q 016788 111 LQAIKYLSAAGFG-AKLLAVF-GNG-MVQSFINART-LTPADMRNPKLAAEIAKQLRRFHQVEIPGS----K-----EPQ 177 (382)
Q Consensus 111 ~~~l~~l~~~gl~-P~~~~~~-~~g-~i~e~i~G~~-l~~~~~~~~~~~~~ia~~La~lH~~~~~~~----~-----~p~ 177 (382)
..+...|...|+. |++++.+ +.| .+.|-+.-.+ +....-...+.....++.|+.+|....+.. . .|
T Consensus 71 vai~~lL~~~Gv~vPqIla~Dld~GfllLedLG~e~~l~~~g~~~~ery~~a~~ll~~~h~~~~~~q~~~~~g~~~~lp- 149 (351)
T COG3178 71 VAIAGLLAGQGVRVPQILAADLDQGFLLLEDLGRETFLQALGEPIAERYAAADALLAAAHGALVPLQKAVREGSTHVLP- 149 (351)
T ss_pred HHHHHHHhcCCcCccHHhhhchhcCchhHhhcCcHHHHHhcCCCchhHHHHHHHHHHHHhcCcchhhcccCCCCCCcCC-
Confidence 5566788889985 9999987 456 4555552221 111111122335677889999999776521 1 11
Q ss_pred chhh---------HHHHH-HHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCC
Q 016788 178 LWND---------VSKFF-EKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQ 247 (382)
Q Consensus 178 ~~~~---------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~ 247 (382)
.|++ +.+|+ .+.....+++.. ...+....+.|...+ ...+.|+||.|+|+.|+|+..+.
T Consensus 150 ~fDr~am~~E~sLf~dWylpr~~g~~l~~~~---------r~~~~aiwd~Lid~~--~~~~~vlvhRDfh~~NLmw~~~~ 218 (351)
T COG3178 150 PFDRAAMRREASLFVDWYLPRHLGRPLTDAE---------RQAWEAIWDGLIDSL--LAQPKVLVHRDFHSRNLMWTADR 218 (351)
T ss_pred cccHHHHHHHHHhhHHhhhHHHhCCCCCHHH---------HHHHHHHHHHHHHHH--hcCCceeeeccccCccceecCCc
Confidence 1221 12232 221111111111 122222333333332 46788999999999999997532
Q ss_pred ---CCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhh
Q 016788 248 ---EKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRHYLRPDKPEEVSDQDLEVLYVEANTFMLA 324 (382)
Q Consensus 248 ---~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~e~~~l~~~v~~~~~~ 324 (382)
+++++|||..|.+||.+||+++++.... .+ + ++|.....+..|....+..... .+...++..-..+..-
T Consensus 219 ~g~~rvGvlDFQDA~iGP~aYDvasL~~DAr-----vt-~-~pe~~~~~l~rY~~~r~~~g~p-~d~~~Flra~~~MgaQ 290 (351)
T COG3178 219 AGADRVGVLDFQDALIGPIAYDVASLLRDAR-----VT-W-SPERELALLDRYWAARRAAGLP-FDEAAFLRAYAWMGAQ 290 (351)
T ss_pred cCCCCCceeehhhhhcCcchhhHHHHHhhcc-----cc-C-CHHHHHHHHHHHHHhhhhcCCC-cCHHHHHHHHHHHHHH
Confidence 3799999999999999999999875521 11 2 4677889999999765422211 1222333222222222
Q ss_pred hhh-HHHHHHHHhcccC
Q 016788 325 SHL-FWALWALIQAKMS 340 (382)
Q Consensus 325 ~~l-~W~lWa~~q~~~~ 340 (382)
.|+ .-++|+-+-..-+
T Consensus 291 R~~KvlGIFaRL~~RDG 307 (351)
T COG3178 291 RHLKVLGIFARLYYRDG 307 (351)
T ss_pred HHhHHHHHhhhhhhccC
Confidence 333 2567777776654
No 51
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.99 E-value=6.4e-09 Score=106.17 Aligned_cols=166 Identities=19% Similarity=0.242 Sum_probs=101.1
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCC--CCcc-------cchHHHHHHHHHHHhCCCC-ceEEEEeCC--c
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPN--TDIV-------INRQRELQAIKYLSAAGFG-AKLLAVFGN--G 133 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~--~~~~-------idr~~E~~~l~~l~~~gl~-P~~~~~~~~--g 133 (382)
...|..|-+..+|+....+. ..++++.-.. .... -...+|..+++.+...++. |.++...++ .
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~-----~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 412 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGR-----DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT 412 (535)
T ss_pred cceeccCCcEEEEEEeecCc-----cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence 46778888999999876554 2444332111 0000 1135788889999888875 666665533 3
Q ss_pred eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHH
Q 016788 134 MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQK 213 (382)
Q Consensus 134 ~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 213 (382)
.|+||++|.++...-.....++.+++ .
T Consensus 413 lv~E~~~g~~L~~~l~~~~~~~~~i~-----------------------------------------------------~ 439 (535)
T PRK09605 413 IVMEYIGGKDLKDVLEGNPELVRKVG-----------------------------------------------------E 439 (535)
T ss_pred EEEEecCCCcHHHHHHHHHHHHHHHH-----------------------------------------------------H
Confidence 79999999766321000000111111 1
Q ss_pred HHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHH
Q 016788 214 EIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHF 293 (382)
Q Consensus 214 ~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~f 293 (382)
.+..+.+ ..++|+|++|+|||++ ++.+.+|||+.|..+++..|++..+......... ..+..++....|
T Consensus 440 ~L~~lH~--------~giiHrDlkp~NILl~--~~~~~liDFGla~~~~~~~d~a~~l~~~~~~~~~-~~~~~~~~~~~f 508 (535)
T PRK09605 440 IVAKLHK--------AGIVHGDLTTSNFIVR--DDRLYLIDFGLGKYSDLIEDKAVDLHVLKQSLES-THYDFEELWEAF 508 (535)
T ss_pred HHHHHHh--------CCCccCCCChHHEEEE--CCcEEEEeCcccccCCchHhhhhhHHHHHHHhcC-CCCCHHHHHHHH
Confidence 1222211 2589999999999995 5789999999999999999998865332211011 111235578899
Q ss_pred HHHhcCC
Q 016788 294 FRHYLRP 300 (382)
Q Consensus 294 l~~Y~~~ 300 (382)
+++|...
T Consensus 509 l~gY~~~ 515 (535)
T PRK09605 509 LEGYRET 515 (535)
T ss_pred HHhhccC
Confidence 9999754
No 52
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=98.96 E-value=2.9e-09 Score=94.26 Aligned_cols=68 Identities=22% Similarity=0.394 Sum_probs=50.8
Q ss_pred CCeeeeccCCCCCceeeeCCCC----CEEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHHHHhcCC
Q 016788 227 APVVFSHNDLLSGNIMVNDEQE----KLYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRHYLRP 300 (382)
Q Consensus 227 ~~~vl~H~Dl~~~NiL~~~~~~----~~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~ 300 (382)
...|+||||++++|||+..++. .+.+|||+.+++|+|++||+.++...+... ...+....|++.|.+.
T Consensus 118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~Dl~~~l~~~~~~~------~r~~~~~~ll~~Y~~~ 189 (196)
T smart00587 118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLLTSLSVE------IRREHFDELLKFYYET 189 (196)
T ss_pred CceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHHHHHHHHHhCCCHH------HHHHHHHHHHHHHHHH
Confidence 4679999999999999974322 589999999999999999999986532100 0123456788888653
No 53
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.94 E-value=2.2e-08 Score=91.46 Aligned_cols=129 Identities=19% Similarity=0.296 Sum_probs=80.9
Q ss_pred ceeeeeEEEEEecCCCCCCeeEEEEEcCCCC--------Ccc---c---chHHHHHHHHHHHhCCCC-ceEEEEe--CCc
Q 016788 71 GGITNLLLKVTVKEESGNDVSVTVRLYGPNT--------DIV---I---NRQRELQAIKYLSAAGFG-AKLLAVF--GNG 133 (382)
Q Consensus 71 gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~--------~~~---i---dr~~E~~~l~~l~~~gl~-P~~~~~~--~~g 133 (382)
.|-.|.+|+|...++ +++||.+..+. +.. . .-.+|+.++..|...|++ |++++.. ..+
T Consensus 42 ~~g~gtv~~v~~~~~-----~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~ 116 (239)
T PRK01723 42 AKGRGTTWFVQTPGV-----NWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG 116 (239)
T ss_pred CCCCccEEEEEeCCc-----eEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence 566799999998765 79999884321 000 1 125699999999999985 8888753 121
Q ss_pred ------eEEEeecC-CcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhccccc
Q 016788 134 ------MVQSFINA-RTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETI 206 (382)
Q Consensus 134 ------~i~e~i~G-~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (382)
+|+++++| .++. ..+.. ... + . ..
T Consensus 117 ~~~~~~lV~e~l~G~~~L~--------------~~l~~---~~l-----~---~--~~---------------------- 147 (239)
T PRK01723 117 LFYRADILIERIEGARDLV--------------ALLQE---APL-----S---E--EQ---------------------- 147 (239)
T ss_pred cceeeeEEEEecCCCCCHH--------------HHHhc---CCC-----C---H--HH----------------------
Confidence 68899987 3331 01110 000 1 0 00
Q ss_pred CHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCc
Q 016788 207 SFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYR 263 (382)
Q Consensus 207 ~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~ 263 (382)
+..+...+..+. ...++|+|++|+|||+++ ++.+.||||+.+....+
T Consensus 148 -~~~i~~~l~~lH--------~~GI~HrDlkp~NILv~~-~~~v~LIDfg~~~~~~~ 194 (239)
T PRK01723 148 -WQAIGQLIARFH--------DAGVYHADLNAHNILLDP-DGKFWLIDFDRGELRTP 194 (239)
T ss_pred -HHHHHHHHHHHH--------HCCCCCCCCCchhEEEcC-CCCEEEEECCCcccCCC
Confidence 011222222222 236899999999999975 56899999999988764
No 54
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.90 E-value=7.6e-08 Score=82.28 Aligned_cols=175 Identities=17% Similarity=0.206 Sum_probs=100.4
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCC-CC-----cccch---HHHHHHHHHHHhCCCC-ceEEEEeCCc-
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPN-TD-----IVINR---QRELQAIKYLSAAGFG-AKLLAVFGNG- 133 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~-~~-----~~idr---~~E~~~l~~l~~~gl~-P~~~~~~~~g- 133 (382)
.+..+..|-...+++....+. .+|+|.-.+. .. .-+.+ .+|.+.+..+...|+. |+++..+.++
T Consensus 11 ~l~likQGAEArv~~~~~~Ge-----~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~ 85 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGE-----AAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGG 85 (229)
T ss_pred cceeeeccceeeEeeeccCCc-----eeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCC
Confidence 456777888889998888765 6777754322 11 11222 6789999999889985 9999998644
Q ss_pred -eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHH
Q 016788 134 -MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQ 212 (382)
Q Consensus 134 -~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (382)
++|||++|-+... +|+.....-...+.... .+ ...+-
T Consensus 86 ~i~ME~~~g~~~vk-------------------------------------~~i~~~~~~~~~d~~~~-~~----~~~iG 123 (229)
T KOG3087|consen 86 QIYMEFIDGASTVK-------------------------------------DFILSTMEDESEDEGLA-EL----ARRIG 123 (229)
T ss_pred eEEEEeccchhHHH-------------------------------------HHHHHHccCcccchhHH-HH----HHHHH
Confidence 7899998832110 00000000000000000 00 11122
Q ss_pred HHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCE--EEEEeecCCCCC----chhhHHhhhhhcCccccCCCCCCC
Q 016788 213 KEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKL--YLIDFEYGSYNY----RGYDIGNHFSEYAGYDCDYSLYPN 286 (382)
Q Consensus 213 ~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~--~lIDfE~a~~~~----~~~Dla~~~~e~~~~~~~~~~~p~ 286 (382)
+.+.++ ...-+|||||...|||+.++++.+ .+|||..+.++- .+.||=.+ |-+ +.+..++ .
T Consensus 124 ~~igkl--------H~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~~~EDKgVDLYVl--ErA-~lsTh~~--~ 190 (229)
T KOG3087|consen 124 ELIGKL--------HDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSRLPEDKGVDLYVL--ERA-VLSTHDK--K 190 (229)
T ss_pred HHHHHh--------hhCCeecccccccceEEecCCCcCceEEEeecchhcccCcccccceeeee--hHh-HhccCcc--c
Confidence 222222 223689999999999998766554 999999988763 34444211 100 0111111 2
Q ss_pred HHHHHHHHHHhcC
Q 016788 287 KDEQNHFFRHYLR 299 (382)
Q Consensus 287 ~~~~~~fl~~Y~~ 299 (382)
+...+.|+++|..
T Consensus 191 ~~~fe~~~~~Y~~ 203 (229)
T KOG3087|consen 191 ALLFEGFLEGYRA 203 (229)
T ss_pred HHHHHHHHHHHHh
Confidence 3356889999984
No 55
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.86 E-value=6.8e-08 Score=89.46 Aligned_cols=66 Identities=18% Similarity=0.267 Sum_probs=48.0
Q ss_pred eeeeccCCCCCceeeeC------CCCCEEEEEeecCCC--C----CchhhHHhhhhhcCccccCCCCCCCHHHHHHHHHH
Q 016788 229 VVFSHNDLLSGNIMVND------EQEKLYLIDFEYGSY--N----YRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRH 296 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~------~~~~~~lIDfE~a~~--~----~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~ 296 (382)
..++|+|++++|||++. ++..+.+||+|.+.. . .+.-|++.+....+.+ ..+...+..|+.+
T Consensus 157 ~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~~~~~~~~~r~~dL~~L~~s~~~~------~ls~~d~~~fl~~ 230 (268)
T PRK15123 157 AGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQIRARVPRRWRDKDLAGLYFSAMDI------GLTQRDILRFLRV 230 (268)
T ss_pred CcCccCCCChhhEEEeccccCCCCCceEEEEECCcccccCCCChHHHHHHHHHHHHHhccc------CCCHHHHHHHHHH
Confidence 47899999999999974 135799999998833 2 4558898876442211 1255668899999
Q ss_pred hcCC
Q 016788 297 YLRP 300 (382)
Q Consensus 297 Y~~~ 300 (382)
|.+.
T Consensus 231 Y~~~ 234 (268)
T PRK15123 231 YFGR 234 (268)
T ss_pred HhCC
Confidence 9984
No 56
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.81 E-value=2.7e-08 Score=88.84 Aligned_cols=63 Identities=25% Similarity=0.427 Sum_probs=46.2
Q ss_pred eeeeccCCCCCceeeeCCC--CCEEEEEeecCCCCC-----chhhHHhhhhhcCccccCCCCCCCHHHHHHHHHHh
Q 016788 229 VVFSHNDLLSGNIMVNDEQ--EKLYLIDFEYGSYNY-----RGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRHY 297 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~--~~~~lIDfE~a~~~~-----~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y 297 (382)
..++|+|++++|||+++++ ..+.+||||.+.... ..-||+.+..... ... -+++.+..|+++|
T Consensus 137 ~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~~~~~~~~dL~~L~rs~~-----~~~-~~~~d~~~fl~~Y 206 (206)
T PF06293_consen 137 AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPSSRRWRAKDLARLLRSLL-----RSG-WSERDRQRFLRGY 206 (206)
T ss_pred CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCCChHHHHHhHHHHHHhcc-----ccC-CCHHHHHHHHhhC
Confidence 4889999999999998532 159999999998877 4667777654322 111 2556788899888
No 57
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.78 E-value=1.7e-07 Score=82.53 Aligned_cols=137 Identities=20% Similarity=0.293 Sum_probs=84.9
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcc---------------------------cchHHHHHHHHHHHh
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIV---------------------------INRQRELQAIKYLSA 119 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~---------------------------idr~~E~~~l~~l~~ 119 (382)
.+|..|....+|++...++ ..+++|+..+..... .....|...+..+..
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g----~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 78 (190)
T cd05145 3 GCISTGKEANVYHARTGDG----EELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYE 78 (190)
T ss_pred ceeecCCCcEEEEEEcCCC----CEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3677788889999987643 489999986542110 011467888888988
Q ss_pred CCCC-ceEEEEeCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHH
Q 016788 120 AGFG-AKLLAVFGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIE 198 (382)
Q Consensus 120 ~gl~-P~~~~~~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 198 (382)
.|+. |.++....+-+|+||++|..+.... +.. ...+ . .....+
T Consensus 79 ~~i~~p~~~~~~~~~lVmE~~~g~~~~~~~-------------l~~---~~~~----~---~~~~~i------------- 122 (190)
T cd05145 79 AGVPVPEPILLKKNVLVMEFIGDDGSPAPR-------------LKD---VPLE----E---EEAEEL------------- 122 (190)
T ss_pred CCCCCceEEEecCCEEEEEEecCCCchhhh-------------hhh---ccCC----H---HHHHHH-------------
Confidence 8875 8888766656899999996332110 000 0100 0 000111
Q ss_pred HhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 199 KQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 199 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
...+...+..+.. ...++|+|++|+|||++ ++.+.||||..|..-
T Consensus 123 ---------~~~l~~~l~~lH~-------~~givHrDlkP~NIll~--~~~~~liDFG~a~~~ 167 (190)
T cd05145 123 ---------YEQVVEQMRRLYQ-------EAGLVHGDLSEYNILYH--DGKPYIIDVSQAVEL 167 (190)
T ss_pred ---------HHHHHHHHHHHHH-------hCCEecCCCChhhEEEE--CCCEEEEEcccceec
Confidence 1112222222211 24899999999999997 578999999988663
No 58
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.75 E-value=1.7e-07 Score=82.43 Aligned_cols=35 Identities=23% Similarity=0.435 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCCCC-ceEEEEeCCceEEEeecCC
Q 016788 108 QRELQAIKYLSAAGFG-AKLLAVFGNGMVQSFINAR 142 (382)
Q Consensus 108 ~~E~~~l~~l~~~gl~-P~~~~~~~~g~i~e~i~G~ 142 (382)
++|++.|+.|.+.|++ |+++....+.+|||||+|.
T Consensus 74 ~kE~r~L~rl~~~Gv~vP~pi~~~~~~lvME~Ig~~ 109 (197)
T cd05146 74 EKEMHNLKRMQKAGIPCPEVVVLKKHVLVMSFIGDD 109 (197)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEecCCEEEEEEcCCC
Confidence 4799999999999986 9999987788999999875
No 59
>smart00090 RIO RIO-like kinase.
Probab=98.70 E-value=4.1e-07 Score=82.96 Aligned_cols=75 Identities=21% Similarity=0.236 Sum_probs=53.0
Q ss_pred EEecceeeeeEEEEE--ecCCCCCCeeEEEEEcCCCCCcc-------------------------cchHHHHHHHHHHHh
Q 016788 67 DTVSGGITNLLLKVT--VKEESGNDVSVTVRLYGPNTDIV-------------------------INRQRELQAIKYLSA 119 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~--~~~~~~~~~~~vlRi~~~~~~~~-------------------------idr~~E~~~l~~l~~ 119 (382)
++|..|....+|+.. ..++ ..+++|+........ .....|+.++..+..
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSG----KERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred CeeccCcceeEEEEEecCCCC----cEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 568788888999997 3333 478899875432100 012579999999988
Q ss_pred CCCC-ceEEEEeCCceEEEeecCCcCC
Q 016788 120 AGFG-AKLLAVFGNGMVQSFINARTLT 145 (382)
Q Consensus 120 ~gl~-P~~~~~~~~g~i~e~i~G~~l~ 145 (382)
.++. |+++......+|+||++|..+.
T Consensus 110 ~~i~~p~~~~~~~~~lV~E~~~g~~L~ 136 (237)
T smart00090 110 AGVPVPKPIAWRRNVLVMEFIGGDGLP 136 (237)
T ss_pred cCCCCCeeeEecCceEEEEEecCCccc
Confidence 7764 8888766666899999997654
No 60
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.67 E-value=2.3e-07 Score=81.65 Aligned_cols=73 Identities=16% Similarity=0.280 Sum_probs=49.9
Q ss_pred EecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccc---------------------------hHHHHHHHHHHHhC
Q 016788 68 TVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVIN---------------------------RQRELQAIKYLSAA 120 (382)
Q Consensus 68 ~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~id---------------------------r~~E~~~l~~l~~~ 120 (382)
.|..|....+|+....++ .++++|+..+......+ ...|+.++..|...
T Consensus 4 ~ig~G~~~~Vy~a~~~~g----~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05147 4 CISTGKEANVYHATTANG----EERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA 79 (190)
T ss_pred ccccccceEEEEEECCCC----CEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 466777888999987644 48999987543211000 13488999999888
Q ss_pred CCC-ceEEEEeCCceEEEeecCCcC
Q 016788 121 GFG-AKLLAVFGNGMVQSFINARTL 144 (382)
Q Consensus 121 gl~-P~~~~~~~~g~i~e~i~G~~l 144 (382)
|+. |.++......+|+||++|..+
T Consensus 80 ~v~~p~~~~~~~~~iVmE~i~g~~l 104 (190)
T cd05147 80 GIPCPEPILLKSHVLVMEFIGDDGW 104 (190)
T ss_pred CCCCCcEEEecCCEEEEEEeCCCCC
Confidence 874 766655455689999999543
No 61
>PRK09902 hypothetical protein; Provisional
Probab=98.60 E-value=1.4e-06 Score=77.12 Aligned_cols=62 Identities=16% Similarity=0.071 Sum_probs=45.5
Q ss_pred eeeeccCCCCCceeeeCCCCC--EEEEEeecCCCCC-----chhhHHhhhhhcCccccCCCCCCCHHHHHHHHHHhcC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEK--LYLIDFEYGSYNY-----RGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRHYLR 299 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~--~~lIDfE~a~~~~-----~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~ 299 (382)
..++|+|+.+.||+++. ++. +.|||||-+.... ..-||..+..... .+ ++.++..|+.+|+.
T Consensus 147 ~Gv~Hgdly~khIll~~-~g~~~v~lIDlEk~r~~l~~~~~~~~Dl~~l~r~~~-------~~-s~~~~~~~~~~y~~ 215 (216)
T PRK09902 147 VNRQHGCCYVRHIYVKT-EGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLE-------PI-PKADWEQVKAYYYA 215 (216)
T ss_pred CCCcCCCCCHhheeecC-CCCeeEEEEEhhccchhhhhhhhhHhHHHHHHHhcc-------CC-CHHHHHHHHHHHhc
Confidence 47899999999999974 346 9999999886643 4667777652211 12 45678899999973
No 62
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.60 E-value=2.8e-07 Score=80.73 Aligned_cols=37 Identities=27% Similarity=0.330 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhCCC-CceEEEEeCCceEEEeec--CCcC
Q 016788 108 QRELQAIKYLSAAGF-GAKLLAVFGNGMVQSFIN--ARTL 144 (382)
Q Consensus 108 ~~E~~~l~~l~~~gl-~P~~~~~~~~g~i~e~i~--G~~l 144 (382)
.+|+++|..|.+.|+ .|+++.+..+-+|||||+ |.++
T Consensus 56 ~~E~~~L~~l~~~Gv~vP~p~~~~~~~ivME~I~~~G~~~ 95 (188)
T PF01163_consen 56 KKEFRNLKRLYEAGVPVPKPYDYNRNVIVMEYIGEDGVPL 95 (188)
T ss_dssp HHHHHHHHHCCCTT-SS--EEEEETTEEEEE--EETTEEG
T ss_pred HHHHHHHHHHHHCCccCCcEEEEeCCEEEEEecCCCccch
Confidence 678999999999997 599999988889999998 7655
No 63
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.59 E-value=8.8e-07 Score=78.38 Aligned_cols=75 Identities=17% Similarity=0.207 Sum_probs=51.8
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc-----------------------ccchHHHHHHHHHHHhCCC-
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI-----------------------VINRQRELQAIKYLSAAGF- 122 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~-----------------------~idr~~E~~~l~~l~~~gl- 122 (382)
++|..|....+|++...++ ..+++|+....... ......|+.++..+...++
T Consensus 21 ~~i~~G~~g~Vy~~~~~~g----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 21 NQIGVGKESDVYLALDPDG----NPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred CccccCcceEEEEEEcCCC----CEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 5688888889999977544 37888875432100 0113567888888877765
Q ss_pred CceEEEEeCCceEEEeecCCcCC
Q 016788 123 GAKLLAVFGNGMVQSFINARTLT 145 (382)
Q Consensus 123 ~P~~~~~~~~g~i~e~i~G~~l~ 145 (382)
.|+++......++++|++|.++.
T Consensus 97 v~~~~~~~~~~lv~e~~~g~~L~ 119 (198)
T cd05144 97 VPKPIDWNRHAVVMEYIDGVELY 119 (198)
T ss_pred CCceeecCCceEEEEEeCCcchh
Confidence 47887765666899999997653
No 64
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.55 E-value=6.4e-07 Score=81.35 Aligned_cols=130 Identities=18% Similarity=0.274 Sum_probs=89.0
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--------------------cccc---hHHHHHHHHHHHhCCCC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--------------------IVIN---RQRELQAIKYLSAAGFG 123 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--------------------~~id---r~~E~~~l~~l~~~gl~ 123 (382)
++|.-|=...+|.+..+.+. ++++|++.-+.. ..+. -++|+++|+.|...|..
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~----~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGR----KVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred cccccCccceEEEEECCCCC----EEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 46666778889998887653 899998754321 0112 37899999999999875
Q ss_pred -ceEEEEeCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhc
Q 016788 124 -AKLLAVFGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSM 202 (382)
Q Consensus 124 -P~~~~~~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (382)
|+++...-+-.|||+|+|.+|....+ + ...| .. +
T Consensus 173 VP~P~~~nRHaVvMe~ieG~eL~~~r~-~---------------------~en~------~~----i------------- 207 (304)
T COG0478 173 VPKPIAWNRHAVVMEYIEGVELYRLRL-D---------------------VENP------DE----I------------- 207 (304)
T ss_pred CCCccccccceeeeehcccceeecccC-c---------------------ccCH------HH----H-------------
Confidence 99999888889999999977653321 0 0001 00 0
Q ss_pred ccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 203 YETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 203 ~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
+..+.+++. ... ...++||||.+-|||+++ ++.+++|||--+-
T Consensus 208 -----l~~il~~~~---~~~-----~~GiVHGDlSefNIlV~~-dg~~~vIDwPQ~v 250 (304)
T COG0478 208 -----LDKILEEVR---KAY-----RRGIVHGDLSEFNILVTE-DGDIVVIDWPQAV 250 (304)
T ss_pred -----HHHHHHHHH---HHH-----HcCccccCCchheEEEec-CCCEEEEeCcccc
Confidence 112222222 221 358999999999999985 6789999998654
No 65
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.55 E-value=9.3e-07 Score=77.18 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=51.3
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccc-------------------------hHHHHHHHHHHHhCC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVIN-------------------------RQRELQAIKYLSAAG 121 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~id-------------------------r~~E~~~l~~l~~~g 121 (382)
..|..|....+|++...++ ..+++|++.+......+ ...|...+..+...+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~----~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~ 78 (187)
T cd05119 3 GPIGTGKEADVYLALDGDG----EPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG 78 (187)
T ss_pred cccccccceeEEEEECCCC----CEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC
Confidence 3566788889999877643 37999987653211100 135677777777777
Q ss_pred C-CceEEEEeCCceEEEeecCCcC
Q 016788 122 F-GAKLLAVFGNGMVQSFINARTL 144 (382)
Q Consensus 122 l-~P~~~~~~~~g~i~e~i~G~~l 144 (382)
+ .|+++.......+++|++|..+
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~g~~~ 102 (187)
T cd05119 79 VPVPKPIDLNRHVLVMEFIGGDGI 102 (187)
T ss_pred CCCCceEecCCCEEEEEEeCCCCc
Confidence 6 5898887666789999999653
No 66
>PRK12274 serine/threonine protein kinase; Provisional
Probab=98.53 E-value=9.1e-07 Score=78.38 Aligned_cols=133 Identities=18% Similarity=0.214 Sum_probs=82.9
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccc---hHHHHHHHHHHHhCCCCceEEEEeCCceEEEeec
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVIN---RQRELQAIKYLSAAGFGAKLLAVFGNGMVQSFIN 140 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~id---r~~E~~~l~~l~~~gl~P~~~~~~~~g~i~e~i~ 140 (382)
.+.+..|.-..+|.+..++. +++.|-....+. ..+. -.+|+++++.|......|+++.......+++|++
T Consensus 7 ~~~l~~~~f~~v~~~~~~~~-----k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~ 81 (218)
T PRK12274 7 NEPLKSDTFGRILLVRGGER-----KFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLA 81 (218)
T ss_pred ceeecCCCcceEEEeecCCc-----eeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeec
Confidence 45666677788887766443 677666544332 1111 1579999999977666699988754457999999
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|.+|... .+. .+ ..++.+ +...+..+.
T Consensus 82 G~~L~~~----------------------~~~--~~------~~~~~q----------------------i~~~L~~lH- 108 (218)
T PRK12274 82 GAAMYQR----------------------PPR--GD------LAYFRA----------------------ARRLLQQLH- 108 (218)
T ss_pred CccHHhh----------------------hhh--hh------HHHHHH----------------------HHHHHHHHH-
Confidence 9765210 000 00 011111 111122221
Q ss_pred HhcccCCCeeeeccCC-CCCceeeeCCCCCEEEEEeecCCCCCch
Q 016788 221 LAGHLNAPVVFSHNDL-LSGNIMVNDEQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl-~~~NiL~~~~~~~~~lIDfE~a~~~~~~ 264 (382)
...++|+|+ .|.|||+++ ++.+.||||..|...++-
T Consensus 109 -------~~GIvHrDL~kp~NILv~~-~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 109 -------RCGVAHNDLAKEANWLVQE-DGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred -------HCcCccCCCCCcceEEEcC-CCCEEEEECCCceecCCc
Confidence 237999999 699999975 678999999999876643
No 67
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.47 E-value=2.7e-06 Score=75.62 Aligned_cols=75 Identities=8% Similarity=0.113 Sum_probs=45.0
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcc-------c---chHHHHHHHHHHHhCCCC-c-eEEEE-e-C
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIV-------I---NRQRELQAIKYLSAAGFG-A-KLLAV-F-G 131 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~-------i---dr~~E~~~l~~l~~~gl~-P-~~~~~-~-~ 131 (382)
++.+.+..-|.|-+++..++ +||+|.|.+..... + .-.+++.....+.+.|+. | .++.. . .
T Consensus 36 ~kv~k~~~r~~ValIei~~~-----kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk 110 (229)
T PF06176_consen 36 IKVFKNTKRNYVALIEIDGK-----KYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKK 110 (229)
T ss_pred EEeecCCCccEEEEEEECCc-----EEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeee
Confidence 35556666778888888776 89999998753210 0 112334445566667763 3 22221 1 1
Q ss_pred -------CceEEEeecCCcCC
Q 016788 132 -------NGMVQSFINARTLT 145 (382)
Q Consensus 132 -------~g~i~e~i~G~~l~ 145 (382)
..+|+|||+|..+.
T Consensus 111 ~~~~~~~~~ll~EYIeG~~l~ 131 (229)
T PF06176_consen 111 IFRYTSSYVLLMEYIEGVELN 131 (229)
T ss_pred eccceeEEEEEEEEecCeecc
Confidence 12599999998775
No 68
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=98.42 E-value=1.5e-06 Score=87.44 Aligned_cols=198 Identities=19% Similarity=0.251 Sum_probs=104.7
Q ss_pred eEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC--ceEEEEe----CCc----
Q 016788 64 FSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG--AKLLAVF----GNG---- 133 (382)
Q Consensus 64 ~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~--P~~~~~~----~~g---- 133 (382)
..+..+++..||....+.. ++|+|+|..-.. .++ =|.++.+.|.+.|++ |.++|.. .+|
T Consensus 168 ~~~r~l~~EQSNtSi~~g~--------~~ilKlyRrl~~-G~n--Pe~E~~r~Lte~gf~~vP~llG~v~~~~~~g~~~t 236 (528)
T TIGR02457 168 PEVRLLSAEQSNSSLVVGD--------RVVLKLYRKVEP-GIN--PEIEMGRYLTAAGYANIPPLLGSVERVGGDQAPHT 236 (528)
T ss_pred CceeecCCCcCceEEEECC--------EEEEEEecccCC-CCC--cchHHHHHHHhCCCccCCcccEEEEEEcCCCCEEe
Confidence 3567888888998877622 699999976422 233 356677888888764 8888752 333
Q ss_pred --eEEEeecCC--c----CCc-------------------cc-cC-ChHHHHHHHHHHHHHhcccCC------CCCCCcc
Q 016788 134 --MVQSFINAR--T----LTP-------------------AD-MR-NPKLAAEIAKQLRRFHQVEIP------GSKEPQL 178 (382)
Q Consensus 134 --~i~e~i~G~--~----l~~-------------------~~-~~-~~~~~~~ia~~La~lH~~~~~------~~~~p~~ 178 (382)
++.+|+++. . ++. .+ +. -...+..+|+.++.||..-.. ...+|..
T Consensus 237 la~lq~fV~nqgDaW~~tl~~l~r~~e~~~~~~~~~~~~~~~~~~~~~~~a~~LG~rtAemH~aLA~~~~~~aF~pep~~ 316 (528)
T TIGR02457 237 LGLLQGYVQNQGDAWRWTLGHLKRYIEEQLSPCANGALAPTLIGAGYLEFAGLLGRRLAELHLALAAGGEDPAFAPEPIS 316 (528)
T ss_pred eehHhhhhCCCccHHHHHHHHHHHHHHhhhccccccccChhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC
Confidence 467888653 1 100 00 00 013478899999999974221 1122222
Q ss_pred hhhHHHHHHHhccC---CCCcH-HHhhcccc---cCHHHHHHHHHHHHHHhc----c-cCCCeeeeccCCCCCceeeeCC
Q 016788 179 WNDVSKFFEKASSL---KFDEI-EKQSMYET---ISFKEVQKEIVELKELAG----H-LNAPVVFSHNDLLSGNIMVNDE 246 (382)
Q Consensus 179 ~~~~~~~~~~~~~~---~~~~~-~~~~~~~~---~~~~~l~~~~~~l~~~~~----~-~~~~~vl~H~Dl~~~NiL~~~~ 246 (382)
-.....|.+.+... .+... .....+.. .....|...-+.|.+.+. . ......=||||+|.||+|+..
T Consensus 317 ~~~~~~~~~~~~~~~~~a~~~L~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~~~k~RiHGD~HLgqvL~t~- 395 (528)
T TIGR02457 317 TLYQRSWYQDMRAQAERALQLLAQSRDGLPAAARALADRLLAQRKELAAHLRPLVKREIDGLKIRIHGDFHLGQVLVVQ- 395 (528)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcceEeEecCcchhcEEEeC-
Confidence 22233344333210 00000 00000000 001222222222222221 1 122334499999999999974
Q ss_pred CCCEEEEEeecC---------CCCCchhhHHhhhhhc
Q 016788 247 QEKLYLIDFEYG---------SYNYRGYDIGNHFSEY 274 (382)
Q Consensus 247 ~~~~~lIDfE~a---------~~~~~~~Dla~~~~e~ 274 (382)
+...|||||-= ....|.-|+|.++..+
T Consensus 396 -~d~~IiDFEGEP~Rpl~ERR~k~sPLRDVAGMLRSf 431 (528)
T TIGR02457 396 -DDAVLIDFEGEPARPLAERRAKRSPLRDVAGMLRSF 431 (528)
T ss_pred -CCeEEEcCCCCCCCChHHhccCCChHHHHHHHHHHH
Confidence 44679999841 2356778888887654
No 69
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.31 E-value=8.4e-06 Score=73.39 Aligned_cols=158 Identities=22% Similarity=0.308 Sum_probs=96.1
Q ss_pred cchHHHHHHHHHhcCCCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcc---------------
Q 016788 40 LMTPRVIALCKDLFKQWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIV--------------- 104 (382)
Q Consensus 40 ~~~~~~~~~~~~~~~~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~--------------- 104 (382)
.+....+..+..+...=. ...+ .-.|+.|=...+|+-...++ ..+.+|+|...+..+
T Consensus 31 v~D~~t~~~l~~L~~rg~---i~~~-~g~istGKEA~Vy~a~~~~~----~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~ 102 (268)
T COG1718 31 VFDKRTLETLRRLLSRGV---ITEL-VGCISTGKEANVYLAETGDG----RYVAVKIYRTSTSEFKRIRRYIQGDPRFRN 102 (268)
T ss_pred hhhhHHHHHHHHHhcCCc---eeee-EeeecCCcceEEEeeccCCC----ceEEEEEEehhhhhhhhHHHHHhcChhhhc
Confidence 344555666666644321 1122 23677787788888766544 368899987543211
Q ss_pred --cch--------HHHHHHHHHHHhCCCC-ceEEEEeCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCC
Q 016788 105 --INR--------QRELQAIKYLSAAGFG-AKLLAVFGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGS 173 (382)
Q Consensus 105 --idr--------~~E~~~l~~l~~~gl~-P~~~~~~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~ 173 (382)
+++ ..|+..|..+.+.|+. |+++...+|-+|||||...-.....+.+. +.
T Consensus 103 ~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv------------------~~- 163 (268)
T COG1718 103 SRSNRRKLVFAWARKEFRNLKRAYEAGVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDV------------------PL- 163 (268)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCceeecCCeEEEEeccCCCCCCCCcccC------------------Cc-
Confidence 122 4588899999999995 99999989999999996652211111110 00
Q ss_pred CCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEE
Q 016788 174 KEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLI 253 (382)
Q Consensus 174 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lI 253 (382)
++..+ ... ++.+.+.+..|.. ...++||||..-|||++ ++.++||
T Consensus 164 -e~~e~---~~~----------------------~~~~v~~~~~l~~-------~a~LVHgDLSEyNiL~~--~~~p~iI 208 (268)
T COG1718 164 -ELEEA---EGL----------------------YEDVVEYMRRLYK-------EAGLVHGDLSEYNILVH--DGEPYII 208 (268)
T ss_pred -CchhH---HHH----------------------HHHHHHHHHHHHH-------hcCcccccchhhheEEE--CCeEEEE
Confidence 01000 000 1222233333222 23789999999999998 5789999
Q ss_pred EeecCC
Q 016788 254 DFEYGS 259 (382)
Q Consensus 254 DfE~a~ 259 (382)
||--|-
T Consensus 209 D~~QaV 214 (268)
T COG1718 209 DVSQAV 214 (268)
T ss_pred ECcccc
Confidence 998764
No 70
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.23 E-value=1.3e-05 Score=77.53 Aligned_cols=137 Identities=19% Similarity=0.258 Sum_probs=84.1
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC-----C-cccchHHHHHHHHHHHhCCCCceEEEEeCCceEEEee
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT-----D-IVINRQRELQAIKYLSAAGFGAKLLAVFGNGMVQSFI 139 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~-----~-~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g~i~e~i 139 (382)
...|..|....+|+....... ...+.+|+..... . ......+|+++++.|...++.|+++......+|+||+
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~LVmE~~ 100 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDP--GTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGLVRGWT 100 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCC--CeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEEEEEcc
Confidence 456778888899998764311 1245666543221 1 1112468999999998888888887654445799999
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
+|.+|.. . + +.. . ..|+.+ +.+.+..+.
T Consensus 101 ~G~~L~~--~----------------~----~~~--~------~~~~~~----------------------i~~aL~~lH 128 (365)
T PRK09188 101 EGVPLHL--A----------------R----PHG--D------PAWFRS----------------------AHRALRDLH 128 (365)
T ss_pred CCCCHHH--h----------------C----ccc--h------HHHHHH----------------------HHHHHHHHH
Confidence 9965520 0 0 000 0 112211 112222222
Q ss_pred HHhcccCCCeeeeccCC-CCCceeeeCCCCCEEEEEeecCCCCCchh
Q 016788 220 ELAGHLNAPVVFSHNDL-LSGNIMVNDEQEKLYLIDFEYGSYNYRGY 265 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl-~~~NiL~~~~~~~~~lIDfE~a~~~~~~~ 265 (382)
...++|+|+ +|.|||++. ++.+.||||..|..-.+.-
T Consensus 129 --------~~gIiHrDL~KP~NILv~~-~~~ikLiDFGlA~~~~~~~ 166 (365)
T PRK09188 129 --------RAGITHNDLAKPQNWLMGP-DGEAAVIDFQLASVFRRRG 166 (365)
T ss_pred --------HCCCeeCCCCCcceEEEcC-CCCEEEEECccceecccCc
Confidence 137899999 899999964 5789999999987544433
No 71
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.15 E-value=1.6e-05 Score=79.09 Aligned_cols=34 Identities=32% Similarity=0.352 Sum_probs=29.2
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCc
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYR 263 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~ 263 (382)
..++|+|+||+||++.+ ++.+.+|||..++.-++
T Consensus 276 ~g~~H~D~hPgNilv~~-~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLK-DGKIIALDFGIVGRLSE 309 (437)
T ss_pred CCceeCCCCcccEEECC-CCcEEEEeCCCeeECCH
Confidence 36899999999999975 67899999999877654
No 72
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.15 E-value=1.8e-05 Score=67.68 Aligned_cols=74 Identities=14% Similarity=0.212 Sum_probs=58.5
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCCceEEEeecCCcCCc
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGNGMVQSFINARTLTP 146 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g~i~e~i~G~~l~~ 146 (382)
..|..|.+..+|.+...+. .+++|+-..++. .-+.+.|+++++.|+..|++|++|.+..+-..++|++|+++..
T Consensus 28 ~~L~KG~~s~Vyl~~~~~~-----~~a~Kvrr~ds~-r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~~L~~ 101 (201)
T COG2112 28 KELAKGTTSVVYLGEWRGG-----EVALKVRRRDSP-RRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGRPLGK 101 (201)
T ss_pred hhhhcccccEEEEeeccCc-----eEEEEEecCCcc-hhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCcchhh
Confidence 3456777888888887765 577887765432 2356899999999999999999999988776799999987753
No 73
>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]
Probab=98.12 E-value=1.2e-05 Score=69.99 Aligned_cols=137 Identities=21% Similarity=0.267 Sum_probs=83.8
Q ss_pred CCCC-ceEEEEeCCceEEEeecCCcCCcc---ccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCC
Q 016788 120 AGFG-AKLLAVFGNGMVQSFINARTLTPA---DMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFD 195 (382)
Q Consensus 120 ~gl~-P~~~~~~~~g~i~e~i~G~~l~~~---~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 195 (382)
.|.+ .++++.+.+.+++|+..|..+... +=.+.+..+-+++.++++|+-..+.. |. ...+..|++.+-.
T Consensus 63 ~G~Gaarvla~d~~alLlEra~~~rsl~~l~~~G~Dd~aTrIac~a~~rlh~Prp~pp--p~-L~pL~~wf~sLf~---- 135 (274)
T COG3570 63 DGIGAARVLAQDDNALLLERAGGERSLDVLVRDGNDDAATRIACEALARLHAPRPSPP--PE-LLPLERWFESLFR---- 135 (274)
T ss_pred hcCCcchhhccCccHHHHHhccccchHHHHHHhCCchHHHHHHHHHHHHhhCCCCCCC--cc-cccHHHHHHHHHH----
Confidence 4665 688888777789999987543221 11233445667889999999632211 11 1224555554321
Q ss_pred cHHHhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhh
Q 016788 196 EIEKQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSE 273 (382)
Q Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e 273 (382)
. .+.. ..+.-+...+.+.+-..+..+++.|||+|.+|||=.+ ...-.+||-- .-+|+++||.||+|+.
T Consensus 136 ~---a~~d-----~~i~v~aA~~A~~LL~~p~di~pLHGDlHH~Nild~~-~rGWlvIDPk-gl~Gdrg~D~ANlf~N 203 (274)
T COG3570 136 K---ARQD-----GSIYVEAARAAQTLLDTPRDIRPLHGDLHHGNILDGD-RRGWLVIDPK-GLIGDRGFDYANLFCN 203 (274)
T ss_pred H---Hhhc-----CCcchhHHHHHHHHhcCccccccCcccccccccccCC-cCceEEEccc-cccCccccchHhhhcC
Confidence 0 0000 0111222223333334667789999999999999543 3357899986 6789999999999875
No 74
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.99 E-value=1.6e-05 Score=80.01 Aligned_cols=162 Identities=15% Similarity=0.218 Sum_probs=97.7
Q ss_pred HHHHHHHHHhcC-CCCCCCCCCeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcc-----------------
Q 016788 43 PRVIALCKDLFK-QWSKLDDSRFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIV----------------- 104 (382)
Q Consensus 43 ~~~~~~~~~~~~-~W~~~~~~~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~----------------- 104 (382)
+.+..++.+-++ .|.++ =+.++-+|++.+.-..||+-...+|. .++||+-.|+.+..
T Consensus 107 ~~~~~iie~eLG~~iee~-F~eF~~~PiAsASIaQVH~A~L~sG~----~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~ 181 (517)
T COG0661 107 EEAERIIEEELGRPIEEL-FSEFEPEPIASASIAQVHRAVLKSGE----EVAVKVQRPGIRERIEADLKLLRRLARLIKR 181 (517)
T ss_pred HHHHHHHHHHhCCCHHHH-HHHcCCCchhhhhHhhheeEEecCCC----EEEEEecCCChHHHHHHHHHHHHHHHHHHHH
Confidence 445555555444 34322 12355579999999999999998763 89999988873211
Q ss_pred ------------------------cchHHHHHHHHHHHhC-----CC-CceEEEEe--CCceEEEeecCCcCCccccCCh
Q 016788 105 ------------------------INRQRELQAIKYLSAA-----GF-GAKLLAVF--GNGMVQSFINARTLTPADMRNP 152 (382)
Q Consensus 105 ------------------------idr~~E~~~l~~l~~~-----gl-~P~~~~~~--~~g~i~e~i~G~~l~~~~~~~~ 152 (382)
+|-.+|...+..++++ .+ .|+++.-. +.-+++|||+|.+++.-+
T Consensus 182 ~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~---- 257 (517)
T COG0661 182 LPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIA---- 257 (517)
T ss_pred cCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHH----
Confidence 1445566677666652 22 48888543 344789999998776421
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhcccCCCeeee
Q 016788 153 KLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAGHLNAPVVFS 232 (382)
Q Consensus 153 ~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~ 232 (382)
.+.. +..+ . +-+.. .+... .++..+ .-.|.
T Consensus 258 --------~l~~-~g~d------~-------k~ia~---------------------~~~~~--f~~q~~-----~dgff 287 (517)
T COG0661 258 --------ALKS-AGID------R-------KELAE---------------------LLVRA--FLRQLL-----RDGFF 287 (517)
T ss_pred --------HHHh-cCCC------H-------HHHHH---------------------HHHHH--HHHHHH-----hcCcc
Confidence 0111 1100 0 00000 00000 011111 23889
Q ss_pred ccCCCCCceeeeCCCCCEEEEEeecCCCCCch
Q 016788 233 HNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 233 H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~ 264 (382)
|+|.|||||+++. ++.+.++||...+.=++.
T Consensus 288 HaDpHpGNi~v~~-~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 288 HADPHPGNILVRS-DGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred ccCCCccceEEec-CCcEEEEcCcceecCCHH
Confidence 9999999999986 689999999988775554
No 75
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.88 E-value=0.00012 Score=69.50 Aligned_cols=132 Identities=18% Similarity=0.376 Sum_probs=82.1
Q ss_pred ecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC------C-------------------cccc--hHHHHHHHHHHHhCC
Q 016788 69 VSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT------D-------------------IVIN--RQRELQAIKYLSAAG 121 (382)
Q Consensus 69 l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~------~-------------------~~id--r~~E~~~l~~l~~~g 121 (382)
|+.|=...||.++..+|. .+.+|||...- + .++. -+.|.+.|+.|.+.|
T Consensus 152 iSTGKEANVYHat~~dG~----~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG 227 (520)
T KOG2270|consen 152 ISTGKEANVYHATEEDGS----EFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG 227 (520)
T ss_pred cccCccceeEeeecCCCc----eEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 345656678888877764 68888875321 0 0111 156888999999999
Q ss_pred CC-ceEEEEeCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHh
Q 016788 122 FG-AKLLAVFGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQ 200 (382)
Q Consensus 122 l~-P~~~~~~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 200 (382)
|+ |+++..-.+-+||+||.+.......+.+..+ . + ..+..++
T Consensus 228 IP~PePIlLk~hVLVM~FlGrdgw~aPkLKd~~l----------------s----~---~ka~~~Y-------------- 270 (520)
T KOG2270|consen 228 IPCPEPILLKNHVLVMEFLGRDGWAAPKLKDASL----------------S----T---SKARELY-------------- 270 (520)
T ss_pred CCCCCceeeecceEeeeeccCCCCcCcccccccC----------------C----h---HHHHHHH--------------
Confidence 97 9999888888999999654332222222110 0 0 0111111
Q ss_pred hcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecC
Q 016788 201 SMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYG 258 (382)
Q Consensus 201 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a 258 (382)
..+...+..|.+ ...|+|.||.--|+|++ +|++++||---+
T Consensus 271 --------~~~v~~MR~lY~-------~c~LVHADLSEfN~Lyh--dG~lyiIDVSQS 311 (520)
T KOG2270|consen 271 --------QQCVRIMRRLYQ-------KCRLVHADLSEFNLLYH--DGKLYIIDVSQS 311 (520)
T ss_pred --------HHHHHHHHHHHH-------HhceeccchhhhhheEE--CCEEEEEEcccc
Confidence 112222222222 24789999999999998 588999998765
No 76
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=97.86 E-value=0.00018 Score=62.51 Aligned_cols=140 Identities=17% Similarity=0.252 Sum_probs=80.8
Q ss_pred ecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCC----ceEEEeecCC
Q 016788 69 VSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGN----GMVQSFINAR 142 (382)
Q Consensus 69 l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~----g~i~e~i~G~ 142 (382)
|++|..+.+|++...+. +..+++|++...... .-...+|...++.+...++ |+++..... ..+++|++|.
T Consensus 1 l~~g~~~~v~~~~~~~~---~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~~~~e~~~~~ 76 (215)
T cd00180 1 LGEGGFGTVYLARDKKT---GKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNI-VKLYGVFEDENHLYLVMEYCEGG 76 (215)
T ss_pred CCcCCceEEEEEEecCC---CcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCe-eeEeeeeecCCeEEEEEecCCCC
Confidence 35688899999988742 147999998765431 1133577777877765333 445544432 2688999875
Q ss_pred cCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHh
Q 016788 143 TLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELA 222 (382)
Q Consensus 143 ~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 222 (382)
++.. .+...+ . +........++ ..+...+..+.
T Consensus 77 ~l~~--------------~~~~~~------~--~~~~~~~~~~~----------------------~~l~~~l~~lh--- 109 (215)
T cd00180 77 SLKD--------------LLKENE------G--KLSEDEILRIL----------------------LQILEGLEYLH--- 109 (215)
T ss_pred cHHH--------------HHHhcc------C--CCCHHHHHHHH----------------------HHHHHHHHHHH---
Confidence 4321 111111 0 00011111111 11222222221
Q ss_pred cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCch
Q 016788 223 GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 223 ~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~ 264 (382)
...++|+|++++||++++.++.+.|+||+.+......
T Consensus 110 -----~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~ 146 (215)
T cd00180 110 -----SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD 146 (215)
T ss_pred -----hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence 1278999999999999852478999999988765544
No 77
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.84 E-value=0.00024 Score=66.02 Aligned_cols=76 Identities=24% Similarity=0.352 Sum_probs=49.3
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEe-----CCc----eEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVF-----GNG----MVQ 136 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~-----~~g----~i~ 136 (382)
+..|..|..+.+|++..... ...+++|+............+|..++..+.++.-.+++++.+ +++ .|+
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~---~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~ 99 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKN---GSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVL 99 (286)
T ss_pred eeeeccCCCcEEEEEEECCC---CceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEE
Confidence 46777888889999877543 247889987543222123356888888887554445666543 222 589
Q ss_pred EeecCCcC
Q 016788 137 SFINARTL 144 (382)
Q Consensus 137 e~i~G~~l 144 (382)
||++|..|
T Consensus 100 e~~~~~~L 107 (286)
T cd06638 100 ELCNGGSV 107 (286)
T ss_pred eecCCCCH
Confidence 99998765
No 78
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.83 E-value=4.5e-05 Score=77.24 Aligned_cols=79 Identities=14% Similarity=0.158 Sum_probs=54.5
Q ss_pred CeEEEEecceeeeeEEEEEecC-CCCCCeeEEEEEcCCCCCcc-------------------------------------
Q 016788 63 RFSVDTVSGGITNLLLKVTVKE-ESGNDVSVTVRLYGPNTDIV------------------------------------- 104 (382)
Q Consensus 63 ~~~i~~l~gG~tN~~y~v~~~~-~~~~~~~~vlRi~~~~~~~~------------------------------------- 104 (382)
.++.+|+..|....||+....+ + +.++||+-.++....
T Consensus 121 ~fd~~PlasaSiaQVh~A~l~~~G----~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 121 DFDIKPLASASIAQVHFARLKDNG----REVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred hcChhhhcCCCccEEEEEEECCCC----CEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3556899999999999999876 4 389999987652110
Q ss_pred ----cchHHHHHHHHHHHhC-----CC-CceEEEEe--CCceEEEeecCCcCC
Q 016788 105 ----INRQRELQAIKYLSAA-----GF-GAKLLAVF--GNGMVQSFINARTLT 145 (382)
Q Consensus 105 ----idr~~E~~~l~~l~~~-----gl-~P~~~~~~--~~g~i~e~i~G~~l~ 145 (382)
+|..+|..++..+.+. .+ .|++|... ..-+++||++|.+++
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~ 249 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVS 249 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHH
Confidence 2445677677666642 23 47887543 344799999998764
No 79
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.82 E-value=0.00015 Score=69.28 Aligned_cols=140 Identities=12% Similarity=0.194 Sum_probs=78.1
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----Cc-ccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DI-VINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQ 136 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~-~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~ 136 (382)
++.|..|....+|++....+......+.+|+..... .. ......|..+++.+..+...++++..+. ++ +|+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLIL 84 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEE
Confidence 467777888899998764322223468888875321 11 1122456677776655444455655553 22 589
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
+|++|..+.. .+.+ .. ..+ ...+..++ .++...+.
T Consensus 85 e~~~~g~L~~--------------~l~~---~~----~~~--~~~~~~~~----------------------~qi~~~l~ 119 (332)
T cd05614 85 DYVSGGEMFT--------------HLYQ---RD----NFS--EDEVRFYS----------------------GEIILALE 119 (332)
T ss_pred eCCCCCcHHH--------------HHHH---cC----CCC--HHHHHHHH----------------------HHHHHHHH
Confidence 9998754311 0110 00 001 11111111 12222233
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.|. ...++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 120 ~lH--------~~~ivHrDlkp~Nili~~-~~~~kl~DfG~~~ 153 (332)
T cd05614 120 HLH--------KLGIVYRDIKLENILLDS-EGHVVLTDFGLSK 153 (332)
T ss_pred HHH--------HCCcEecCCCHHHeEECC-CCCEEEeeCcCCc
Confidence 332 135899999999999975 6789999999775
No 80
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.78 E-value=0.00032 Score=64.27 Aligned_cols=137 Identities=18% Similarity=0.207 Sum_probs=77.2
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeC-Cc--eEEEeecCCc
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFG-NG--MVQSFINART 143 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g--~i~e~i~G~~ 143 (382)
..|..|....+|++...+.. .+++|+..+.....-+..+|..+++.+...++.| +++... +. ++++|++|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~----~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~-~~~~~~~~~~~~v~e~~~~~~ 86 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTT----KVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVP-LYAVVSEEPIYIVTEFMGKGS 86 (260)
T ss_pred eeecCcCCCeEEEEEEcCCc----eEEEEEcccCCccHHHHHHHHHHHHhCCCCCeee-EEEEEcCCCcEEEEEcCCCCC
Confidence 45666777789998765542 6888887554322112356777777776555544 344443 22 6889988754
Q ss_pred CCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhc
Q 016788 144 LTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAG 223 (382)
Q Consensus 144 l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 223 (382)
+.. .+ +.... .+..+.....+. ..+.+.+..+.
T Consensus 87 L~~--------------~~---~~~~~----~~~~~~~~~~~~----------------------~~l~~al~~lH---- 119 (260)
T cd05069 87 LLD--------------FL---KEGDG----KYLKLPQLVDMA----------------------AQIADGMAYIE---- 119 (260)
T ss_pred HHH--------------HH---hhCCC----CCCCHHHHHHHH----------------------HHHHHHHHHHH----
Confidence 421 11 11000 000111111111 12223333332
Q ss_pred ccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 224 HLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 224 ~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|+||++++ ++.+.|+||+.+..
T Consensus 120 ----~~~i~H~dl~~~Nill~~-~~~~~l~dfg~~~~ 151 (260)
T cd05069 120 ----RMNYIHRDLRAANILVGD-NLVCKIADFGLARL 151 (260)
T ss_pred ----hCCEeecccCcceEEEcC-CCeEEECCCccceE
Confidence 125899999999999975 67899999998754
No 81
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.78 E-value=0.00014 Score=70.12 Aligned_cols=133 Identities=15% Similarity=0.267 Sum_probs=77.6
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEEEee
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQSFI 139 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~e~i 139 (382)
++.|..|....+|++..... ...+++|+....... .....+|..+++.+...++ .++++.+.. + +|+||+
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPT---GRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNV-VKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred hhhccCCCCeEEEEEEECCC---CCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCc-ceeeeEeccCCeEEEEEecC
Confidence 45677788889999876532 247899987543221 1123567777776654333 355555432 2 589999
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
+|..+...... . ...+..+. .++...+..|.
T Consensus 155 ~~~~L~~~~~~-------------------------~--~~~~~~i~----------------------~qi~~aL~~LH 185 (353)
T PLN00034 155 DGGSLEGTHIA-------------------------D--EQFLADVA----------------------RQILSGIAYLH 185 (353)
T ss_pred CCCcccccccC-------------------------C--HHHHHHHH----------------------HHHHHHHHHHH
Confidence 88655321000 0 00000111 11222233332
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
+ ..++|+|+++.|||+++ ++.+.|+||..+..
T Consensus 186 ~--------~~ivHrDlkp~NIll~~-~~~~kL~DfG~~~~ 217 (353)
T PLN00034 186 R--------RHIVHRDIKPSNLLINS-AKNVKIADFGVSRI 217 (353)
T ss_pred H--------CCEeecCCCHHHEEEcC-CCCEEEccccccee
Confidence 1 26899999999999975 67899999997654
No 82
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=97.71 E-value=0.00017 Score=68.73 Aligned_cols=137 Identities=16% Similarity=0.186 Sum_probs=76.4
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~e 137 (382)
+..|..|....+|++...+. ...+.+|+..... ........|..++..+......++++..+.. . +|+|
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGT---DELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred EEEEeeccCeEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 46777788889999976543 2468899875421 1111123455555555444444556555432 2 5899
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|..|.. .+.. .. ..+ ......+. .++...+..
T Consensus 82 ~~~~g~L~~--------------~~~~---~~----~~~--~~~~~~~~----------------------~qi~~al~~ 116 (324)
T cd05587 82 YVNGGDLMY--------------HIQQ---VG----KFK--EPHAVFYA----------------------AEIAIGLFF 116 (324)
T ss_pred CCCCCcHHH--------------HHHH---cC----CCC--HHHHHHHH----------------------HHHHHHHHH
Confidence 998864421 1110 00 000 11111111 122223333
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
|.+ ..++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 117 lH~--------~~ivH~dlkp~Nill~~-~~~~kL~Dfg~~~ 149 (324)
T cd05587 117 LHS--------KGIIYRDLKLDNVMLDA-EGHIKIADFGMCK 149 (324)
T ss_pred HHH--------CCeEecCCCHHHeEEcC-CCCEEEeecCcce
Confidence 321 36899999999999975 6789999999764
No 83
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.71 E-value=0.00031 Score=64.20 Aligned_cols=143 Identities=18% Similarity=0.211 Sum_probs=80.2
Q ss_pred CCCeEE-EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCC----ceE
Q 016788 61 DSRFSV-DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGN----GMV 135 (382)
Q Consensus 61 ~~~~~i-~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~----g~i 135 (382)
.+.+.+ +.|..|....+|++...+. ..+++|.........-+..+|..+++.+....+ +++++.+.. ..|
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~----~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~~v 79 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGT----TKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKL-VQLYAVCSEEEPIYIV 79 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCC----ceEEEEEecCCccCHHHHHHHHHHHhhCCCCCE-eeeeeeeecCCceEEE
Confidence 344444 5667777789999876543 368888876543322234567777766653322 455555432 268
Q ss_pred EEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHH
Q 016788 136 QSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEI 215 (382)
Q Consensus 136 ~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (382)
++|++|.++..- . +... .. .-.+.....++ ..+...+
T Consensus 80 ~e~~~~~~L~~~-------i----------~~~~--~~--~~~~~~~~~~~----------------------~~i~~al 116 (261)
T cd05034 80 TEYMSKGSLLDF-------L----------KSGE--GK--KLRLPQLVDMA----------------------AQIAEGM 116 (261)
T ss_pred EeccCCCCHHHH-------H----------hccc--cC--CCCHHHHHHHH----------------------HHHHHHH
Confidence 899988655210 0 1100 00 00111111111 1122222
Q ss_pred HHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 216 VELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 216 ~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..+. ...++|+|++|.||++++ ++.+.++||+.+..
T Consensus 117 ~~lh--------~~~i~h~di~p~nili~~-~~~~~l~d~g~~~~ 152 (261)
T cd05034 117 AYLE--------SRNYIHRDLAARNILVGE-NLVCKIADFGLARL 152 (261)
T ss_pred HHHH--------hCCcccCCcchheEEEcC-CCCEEECcccccee
Confidence 2222 125899999999999975 68899999987653
No 84
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=97.70 E-value=9.4e-05 Score=70.46 Aligned_cols=138 Identities=15% Similarity=0.200 Sum_probs=76.1
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC-----CcccchHHHHHHHHHHHhCCCCceEEEEe-CCc---eEEE
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT-----DIVINRQRELQAIKYLSAAGFGAKLLAVF-GNG---MVQS 137 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~-----~~~idr~~E~~~l~~l~~~gl~P~~~~~~-~~g---~i~e 137 (382)
+.|..|....+|++....+......+.+|+..... ........|..+++.+...++. ++++.+ .++ +|+|
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv-~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIV-DLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchh-ceeeEEecCCeEEEEEe
Confidence 45667777899999764332233578888864321 1111224677777777544443 444443 333 5889
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|..|.. .+.+ ... .+ ......++ .++...+..
T Consensus 81 ~~~~~~L~~--------------~~~~---~~~----~~--~~~~~~~~----------------------~qi~~~l~~ 115 (323)
T cd05584 81 YLSGGELFM--------------HLER---EGI----FM--EDTACFYL----------------------SEISLALEH 115 (323)
T ss_pred CCCCchHHH--------------HHHH---cCC----CC--HHHHHHHH----------------------HHHHHHHHH
Confidence 998754411 1111 000 00 11111111 122222333
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
|.+ ..++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 116 lH~--------~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~ 148 (323)
T cd05584 116 LHQ--------QGIIYRDLKPENILLDA-QGHVKLTDFGLCK 148 (323)
T ss_pred HHH--------CCeecCCCCHHHeEECC-CCCEEEeeCcCCe
Confidence 321 35899999999999975 6789999998764
No 85
>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.69 E-value=0.00061 Score=62.27 Aligned_cols=97 Identities=21% Similarity=0.233 Sum_probs=59.6
Q ss_pred CCCeeeeccCCCCCceeeeCCCCCEEEEEe---e-cCCCCCchhhHHhhhhhcCccccCCCCCCCHHHHHHHHHHhcCCC
Q 016788 226 NAPVVFSHNDLLSGNIMVNDEQEKLYLIDF---E-YGSYNYRGYDIGNHFSEYAGYDCDYSLYPNKDEQNHFFRHYLRPD 301 (382)
Q Consensus 226 ~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDf---E-~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~~~~~~~fl~~Y~~~~ 301 (382)
.....=||||+|.+||.+- ++.+.|+|- + --.+.|..+|+|-+.-+ .++. ..++....|++.|+.+.
T Consensus 206 ~g~IRecHGDLhl~ni~l~--dg~~~LFDCIEFNd~fr~iDv~~D~AFl~MD-----Le~~--gr~dla~~~ln~Yl~~t 276 (337)
T COG2187 206 EGFIRECHGDLHLRNICLW--DGEPALFDCIEFNDPFRFIDVLYDLAFLAMD-----LEFR--GRKDLARRFLNTYLEET 276 (337)
T ss_pred cCCceecccchhhcceeee--cCcceEEEEeecCCcchHHHHHHHHHHHHhh-----Hhhc--CChHHHHHHHHHHHHHh
Confidence 4567889999999999876 366777663 2 23556778888865321 1222 23456789999999864
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhhhhhHHHHHHHHhcccCCCCcch
Q 016788 302 KPEEVSDQDLEVLYVEANTFMLASHLFWALWALIQAKMSPIDFDY 346 (382)
Q Consensus 302 ~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWa~~q~~~~~~~fdy 346 (382)
. +..--++. .++-+.=|.+++++..--+|+
T Consensus 277 g--D~~gl~lL-------------pfyla~rA~VRakV~sf~ldd 306 (337)
T COG2187 277 G--DWDGLELL-------------PFYLAYRAYVRAKVTSFLLDD 306 (337)
T ss_pred C--CccHHHHh-------------HHHHHHHHHHHHheeEEeccC
Confidence 2 22223333 344455566777665444443
No 86
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.68 E-value=0.00038 Score=63.77 Aligned_cols=141 Identities=18% Similarity=0.198 Sum_probs=78.0
Q ss_pred CeEE-EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEE
Q 016788 63 RFSV-DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQS 137 (382)
Q Consensus 63 ~~~i-~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e 137 (382)
.+++ +.+..|....+|++...++ ..+++|.........-+..+|..+++.+...++ ++++..+..+ .+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~----~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWNNT----TPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKL-IQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred heeeEEEecccCCccEEEEEecCC----eEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCc-cceeEEEecCCCeeeeee
Confidence 3443 6677777789999875443 368888876543221223467777776654333 3455444322 5889
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|.++.. .+.. .. .. ...+..+..++ ..+...+..
T Consensus 82 ~~~~~~L~~--------------~~~~---~~--~~--~~~~~~~~~~~----------------------~~i~~~l~~ 118 (261)
T cd05068 82 LMKYGSLLE--------------YLQG---GA--GR--ALKLPQLIDMA----------------------AQVASGMAY 118 (261)
T ss_pred cccCCcHHH--------------HHhc---cC--CC--CCCHHHHHHHH----------------------HHHHHHHHH
Confidence 987764421 1110 00 00 00111111111 112222222
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
+. ...++|+|++|.||++++ ++.+.|+||+.+..
T Consensus 119 lH--------~~~i~H~dl~p~Nil~~~-~~~~~l~dfg~~~~ 152 (261)
T cd05068 119 LE--------AQNYIHRDLAARNVLVGE-NNICKVADFGLARV 152 (261)
T ss_pred HH--------hCCeeeccCCcceEEEcC-CCCEEECCcceEEE
Confidence 22 125899999999999975 67899999997754
No 87
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=97.66 E-value=0.00018 Score=68.36 Aligned_cols=135 Identities=18% Similarity=0.188 Sum_probs=75.2
Q ss_pred ecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEEEeec
Q 016788 69 VSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQSFIN 140 (382)
Q Consensus 69 l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~e~i~ 140 (382)
|..|....+|++..... ...+.+|+..... ........|..++..+..+...+++++.+.. + +|+||++
T Consensus 3 lG~G~~g~Vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~ 79 (321)
T cd05591 3 LGKGSFGKVMLAELKGT---DEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN 79 (321)
T ss_pred cccCCCeEEEEEEECCC---CCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC
Confidence 55677788999976542 2378889875421 1111123566666555444445666666532 2 6899998
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|.++.. .+.+-. .. + ......+. .++...+..|.+
T Consensus 80 ~~~L~~--------------~l~~~~--~~-----~--~~~~~~~~----------------------~qi~~aL~~LH~ 114 (321)
T cd05591 80 GGDLMF--------------QIQRSR--KF-----D--EPRSRFYA----------------------AEVTLALMFLHR 114 (321)
T ss_pred CCcHHH--------------HHHHcC--CC-----C--HHHHHHHH----------------------HHHHHHHHHHHH
Confidence 864421 011100 00 0 11111111 122223333321
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.|||++. ++.+.|+||..+..
T Consensus 115 --------~~ivHrDikp~Nill~~-~~~~kL~Dfg~~~~ 145 (321)
T cd05591 115 --------HGVIYRDLKLDNILLDA-EGHCKLADFGMCKE 145 (321)
T ss_pred --------CCeeccCCCHHHeEECC-CCCEEEeeccccee
Confidence 25899999999999975 67899999987653
No 88
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=97.62 E-value=0.0002 Score=66.64 Aligned_cols=141 Identities=16% Similarity=0.187 Sum_probs=77.9
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC-----cccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD-----IVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQ 136 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~-----~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~ 136 (382)
.+.|..|....+|++...........+.+|+...... .......|..++..+..+...+++++.+..+ +|+
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 84 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLIL 84 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEE
Confidence 3567778778899887543222234688887753211 1112346777777776554445555544322 589
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
+|++|.++... +. .. .+..+..+..++ .++.+.+.
T Consensus 85 e~~~~~~L~~~--------------~~---~~------~~~~~~~~~~~~----------------------~ql~~~l~ 119 (288)
T cd05583 85 DYVNGGELFTH--------------LY---QR------EHFTESEVRVYI----------------------AEIVLALD 119 (288)
T ss_pred ecCCCCcHHHH--------------Hh---hc------CCcCHHHHHHHH----------------------HHHHHHHH
Confidence 99987544210 00 00 000011111111 11222222
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.|. ...++|+|++|.||++++ ++.+.++||..+..
T Consensus 120 ~lH--------~~~~~H~dl~p~nil~~~-~~~~~l~dfg~~~~ 154 (288)
T cd05583 120 HLH--------QLGIIYRDIKLENILLDS-EGHVVLTDFGLSKE 154 (288)
T ss_pred HHH--------HCCeeccCCCHHHeEECC-CCCEEEEECccccc
Confidence 222 135899999999999975 67899999987643
No 89
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=97.60 E-value=0.00021 Score=65.12 Aligned_cols=137 Identities=20% Similarity=0.306 Sum_probs=81.8
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccch---HHHHHHHHHHHhCCCCceEEEEe--CCc--eEEEe
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINR---QRELQAIKYLSAAGFGAKLLAVF--GNG--MVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr---~~E~~~l~~l~~~gl~P~~~~~~--~~g--~i~e~ 138 (382)
+..|+.|....+|++..... ...+++|+........... ..|..+++.+....+ ++++..+ .+. .|+++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~---~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKN---GQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNI-VQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEESSEEEEEEEETTT---TEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTB-CHEEEEEEESSEEEEEEEE
T ss_pred eEEEEeCCCEEEEEEEECCC---CeEEEEEEeccccccccccchhhhhhhcccccccccc-ccccccccccccccccccc
Confidence 56788888899999988765 2579999987653221111 347888888844444 4555554 232 58999
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++|.++.. .|. .. .+.....+..++ ..+.+.+..|
T Consensus 80 ~~~~~L~~--------------~l~---~~------~~~~~~~~~~~~----------------------~qi~~~L~~L 114 (260)
T PF00069_consen 80 CPGGSLQD--------------YLQ---KN------KPLSEEEILKIA----------------------YQILEALAYL 114 (260)
T ss_dssp ETTEBHHH--------------HHH---HH------SSBBHHHHHHHH----------------------HHHHHHHHHH
T ss_pred cccccccc--------------ccc---cc------cccccccccccc----------------------cccccccccc
Confidence 98863321 111 00 010111111111 1222223333
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.+ ..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 115 h~--------~~i~H~dikp~NIl~~~-~~~~~l~Dfg~~~~ 147 (260)
T PF00069_consen 115 HS--------KGIVHRDIKPENILLDE-NGEVKLIDFGSSVK 147 (260)
T ss_dssp HH--------TTEEESSBSGGGEEEST-TSEEEESSGTTTEE
T ss_pred cc--------ccccccccccccccccc-cccccccccccccc
Confidence 22 27899999999999974 68899999998754
No 90
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.60 E-value=0.00073 Score=61.82 Aligned_cols=138 Identities=21% Similarity=0.242 Sum_probs=78.1
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCC---ceEEEeecCC
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGN---GMVQSFINAR 142 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~---g~i~e~i~G~ 142 (382)
+..++.|....+|++...++ ..+++|...+......+..+|..+++.+...++. +++..... .++++|++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~----~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~-~~~~~~~~~~~~lv~e~~~~~ 85 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGN----TKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLV-QLYAVVSEEPIYIVTEYMSKG 85 (260)
T ss_pred hheeccccCceEEEEEecCC----ceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceE-EEEeEECCCCcEEEEEecCCC
Confidence 35677777789999876554 2688888765432222335777777777554443 33444332 2689998876
Q ss_pred cCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHh
Q 016788 143 TLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELA 222 (382)
Q Consensus 143 ~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 222 (382)
++..- + +... .. +..+.....++ .++...+..|.+
T Consensus 86 ~L~~~--------------~---~~~~--~~--~~~~~~~~~~~----------------------~~l~~al~~lH~-- 120 (260)
T cd05070 86 SLLDF--------------L---KDGE--GR--ALKLPNLVDMA----------------------AQVAAGMAYIER-- 120 (260)
T ss_pred cHHHH--------------H---HhcC--CC--CCCHHHHHHHH----------------------HHHHHHHHHHHH--
Confidence 44210 1 1100 00 00111111111 122233333321
Q ss_pred cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 223 GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 223 ~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.||++++ ++.+.++||+.+..
T Consensus 121 ------~~i~H~di~p~Nili~~-~~~~~l~dfg~~~~ 151 (260)
T cd05070 121 ------MNYIHRDLRSANILVGD-GLVCKIADFGLARL 151 (260)
T ss_pred ------CCcccCCCccceEEEeC-CceEEeCCceeeee
Confidence 25899999999999985 67899999998864
No 91
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=97.59 E-value=0.00025 Score=67.34 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=25.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 118 ~i~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~ 147 (318)
T cd05582 118 GIIYRDLKPENILLDE-EGHIKLTDFGLSKE 147 (318)
T ss_pred CEecCCCCHHHeEECC-CCcEEEeeccCCcc
Confidence 5899999999999975 67899999987653
No 92
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.59 E-value=0.0001 Score=68.85 Aligned_cols=126 Identities=23% Similarity=0.337 Sum_probs=83.5
Q ss_pred EecceeeeeEEEEEecCCCCCCeeEEEEEcCCC--------------------CCccc---chHHHHHHHHHHHhCCCC-
Q 016788 68 TVSGGITNLLLKVTVKEESGNDVSVTVRLYGPN--------------------TDIVI---NRQRELQAIKYLSAAGFG- 123 (382)
Q Consensus 68 ~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~--------------------~~~~i---dr~~E~~~l~~l~~~gl~- 123 (382)
+|.=|=...+|.|...++. .+++|++.-+ +-... .-.+|+..++.|.++|++
T Consensus 99 qIGVGKESDIY~v~d~~G~----~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfpV 174 (465)
T KOG2268|consen 99 QIGVGKESDIYVVADEEGN----PLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFPV 174 (465)
T ss_pred ccccccccceEEEecCCCC----chhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCCC
Confidence 4445667788988887664 6666665321 11122 236799999999999997
Q ss_pred ceEEEEeCCceEEEeecCCcCCcc-ccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhc
Q 016788 124 AKLLAVFGNGMVQSFINARTLTPA-DMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSM 202 (382)
Q Consensus 124 P~~~~~~~~g~i~e~i~G~~l~~~-~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (382)
|+++.++.+..|+++|+|-|+..- ++.++ |.++
T Consensus 175 PkpiD~~RH~Vvmelv~g~Pl~~v~~v~d~-----------------------~~ly----------------------- 208 (465)
T KOG2268|consen 175 PKPIDHNRHCVVMELVDGYPLRQVRHVEDP-----------------------PTLY----------------------- 208 (465)
T ss_pred CCcccccceeeHHHhhcccceeeeeecCCh-----------------------HHHH-----------------------
Confidence 999988778889999999776532 11111 1111
Q ss_pred ccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecC
Q 016788 203 YETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYG 258 (382)
Q Consensus 203 ~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a 258 (382)
..+...+..|. ...++||||+--|||+.+ ++.+.+|||--+
T Consensus 209 ------~~lm~~Iv~la--------~~GlIHgDFNEFNimv~d-d~~i~vIDFPQm 249 (465)
T KOG2268|consen 209 ------DDLMGLIVRLA--------NHGLIHGDFNEFNIMVKD-DDKIVVIDFPQM 249 (465)
T ss_pred ------HHHHHHHHHHH--------HcCceecccchheeEEec-CCCEEEeechHh
Confidence 12222222222 238899999999999985 678999999643
No 93
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.55 E-value=0.0012 Score=60.51 Aligned_cols=138 Identities=20% Similarity=0.242 Sum_probs=77.0
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCCc---eEEEeecC
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGNG---MVQSFINA 141 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g---~i~e~i~G 141 (382)
-.+.+..|....+|++...++ ..+++|.........-...+|..+++.+...++.+ +++....+ .+++|++|
T Consensus 10 ~~~~lg~g~~~~vy~~~~~~~----~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~-~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05073 10 LEKKLGAGQFGEVWMATYNKH----TKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAK 84 (260)
T ss_pred EEeEecCccceEEEEEEecCC----ccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcce-EEEEEcCCCeEEEEEeCCC
Confidence 446777788889999976544 26888877654322122356777777776544433 23333222 68899887
Q ss_pred CcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHH
Q 016788 142 RTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKEL 221 (382)
Q Consensus 142 ~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 221 (382)
.++.. .+. ... .. ...+..+..++ .++...+..+.
T Consensus 85 ~~L~~--------------~~~---~~~--~~--~~~~~~~~~~~----------------------~~l~~aL~~lH-- 119 (260)
T cd05073 85 GSLLD--------------FLK---SDE--GS--KQPLPKLIDFS----------------------AQIAEGMAFIE-- 119 (260)
T ss_pred CcHHH--------------HHH---hCC--cc--ccCHHHHHHHH----------------------HHHHHHHHHHH--
Confidence 54421 010 000 00 00111111111 12222232222
Q ss_pred hcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 222 AGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 222 ~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
...++|+|++|.||++++ ++.+.++||+.+.
T Consensus 120 ------~~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~ 150 (260)
T cd05073 120 ------QRNYIHRDLRAANILVSA-SLVCKIADFGLAR 150 (260)
T ss_pred ------hCCccccccCcceEEEcC-CCcEEECCCccee
Confidence 125799999999999975 6789999998764
No 94
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=97.54 E-value=0.00027 Score=67.25 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=25.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 116 ~ivH~dlkp~NIli~~-~~~~kL~DfG~~~~ 145 (320)
T cd05590 116 GIIYRDLKLDNVLLDH-EGHCKLADFGMCKE 145 (320)
T ss_pred CeEeCCCCHHHeEECC-CCcEEEeeCCCCee
Confidence 5899999999999975 67899999987653
No 95
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.53 E-value=0.0015 Score=59.89 Aligned_cols=138 Identities=18% Similarity=0.225 Sum_probs=76.6
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEeecCC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSFINAR 142 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~i~G~ 142 (382)
..+..|....+|++..... ...+++|+........-...+|..+++.+...++. ++++.+. ++ .|++|++|.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~---~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~ 87 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKY---SLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYG 87 (263)
T ss_pred eecCCcccceEEEEEEecC---CceEEEEEecCCchHHHHHHHHHHHHHhCCCCChh-heEEEEcCCCCcEEEEEeCCCC
Confidence 4566777788999876532 13688888765432222335677777776544443 4444432 22 688999876
Q ss_pred cCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHh
Q 016788 143 TLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELA 222 (382)
Q Consensus 143 ~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 222 (382)
++.. .+..-+. ...+ +..+..+. .++.+.+..|.
T Consensus 88 ~L~~--------------~~~~~~~-----~~l~--~~~~~~~~----------------------~ql~~~l~~lH--- 121 (263)
T cd05052 88 NLLD--------------YLRECNR-----QEVN--AVVLLYMA----------------------TQISSAMEYLE--- 121 (263)
T ss_pred cHHH--------------HHHhCCC-----CCCC--HHHHHHHH----------------------HHHHHHHHHHH---
Confidence 5531 1111010 0001 11111111 12222232232
Q ss_pred cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 223 GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 223 ~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||++++ ++.+.++||+.+..
T Consensus 122 -----~~~i~H~dlkp~nil~~~-~~~~kl~df~~~~~ 153 (263)
T cd05052 122 -----KKNFIHRDLAARNCLVGE-NHLVKVADFGLSRL 153 (263)
T ss_pred -----hCCEeecccCcceEEEcC-CCcEEeCCCccccc
Confidence 135899999999999975 67899999998754
No 96
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=97.53 E-value=0.00041 Score=67.47 Aligned_cols=137 Identities=15% Similarity=0.192 Sum_probs=77.9
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~ 136 (382)
.+..|..|....||++..... ...+.+|+..... ...-...+|..+++.+....+ ++++..+. ++ +|+
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~i-v~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVDT---NALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWV-VKLYYSFQDKDNLYFVM 80 (376)
T ss_pred EEEEEEeCCCeEEEEEEECCC---CCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCc-ceEEEEEEcCCEEEEEE
Confidence 467888888899999986543 2478889875321 111123467777776654444 34555443 33 589
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|..|.. .+.+ .. ..+ ...+..++ .++...+.
T Consensus 81 E~~~~g~L~~--------------~i~~---~~----~~~--~~~~~~~~----------------------~qi~~al~ 115 (376)
T cd05598 81 DYIPGGDMMS--------------LLIR---LG----IFE--EDLARFYI----------------------AELTCAIE 115 (376)
T ss_pred eCCCCCcHHH--------------HHHh---cC----CCC--HHHHHHHH----------------------HHHHHHHH
Confidence 9998864421 1111 00 001 00011111 11222222
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.|. ...++|+|++|.|||++. ++.+.|+||..|.
T Consensus 116 ~lH--------~~~ivHrDlkp~Nill~~-~~~ikL~DFG~a~ 149 (376)
T cd05598 116 SVH--------KMGFIHRDIKPDNILIDR-DGHIKLTDFGLCT 149 (376)
T ss_pred HHH--------HCCeEeCCCCHHHEEECC-CCCEEEEeCCCCc
Confidence 222 135899999999999975 6789999999864
No 97
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.53 E-value=0.0016 Score=59.85 Aligned_cols=138 Identities=17% Similarity=0.198 Sum_probs=76.7
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCCc---eEEEeecCC
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGNG---MVQSFINAR 142 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g---~i~e~i~G~ 142 (382)
.+.+..|....+|++...+. ..+.+|+........-...+|..+++.+...++ .++++..... .|++|++|.
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~----~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~~~~~~~~~~~lv~e~~~~~ 85 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-VQLYAVVSEEPIYIVTEYMSKG 85 (262)
T ss_pred eeecCCCCCCcEEEEEecCC----ceEEEEecccCccCHHHHHHHHHHHHhCCCCCc-ceEEEEECCCCcEEEEEcCCCC
Confidence 35667777789999876543 268888876432211122567777777654343 3445544322 689999876
Q ss_pred cCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHh
Q 016788 143 TLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELA 222 (382)
Q Consensus 143 ~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 222 (382)
++.. .. +... .. ...+.....+. ..+.+.+..+.
T Consensus 86 ~L~~-------~~----------~~~~--~~--~~~~~~~~~~~----------------------~~l~~aL~~lH--- 119 (262)
T cd05071 86 SLLD-------FL----------KGEM--GK--YLRLPQLVDMA----------------------AQIASGMAYVE--- 119 (262)
T ss_pred cHHH-------HH----------hhcc--cc--CCCHHHHHHHH----------------------HHHHHHHHHHH---
Confidence 5421 01 0000 00 00111111111 12222232222
Q ss_pred cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 223 GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 223 ~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||++++ ++.+.|+||..+..
T Consensus 120 -----~~~i~H~dl~p~Nill~~-~~~~~L~dfg~~~~ 151 (262)
T cd05071 120 -----RMNYVHRDLRAANILVGE-NLVCKVADFGLARL 151 (262)
T ss_pred -----HCCccccccCcccEEEcC-CCcEEeccCCceee
Confidence 135799999999999975 67899999998753
No 98
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.52 E-value=0.0015 Score=58.71 Aligned_cols=141 Identities=17% Similarity=0.210 Sum_probs=79.0
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC-cccchHHHHHHHHHHHhCCCCceEEEEeC--Cc--eEEEeec
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD-IVINRQRELQAIKYLSAAGFGAKLLAVFG--NG--MVQSFIN 140 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~-~~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g--~i~e~i~ 140 (382)
...+..|....+|++..... ...+++|+...... ..-...+|...++.+...+ .++++..+. +. .+++|++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRT---GKEVAIKVIKLESKEKKEKIINEIQILKKCKHPN-IVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred eeeeccCCceEEEEEEECCC---CcEEEEEEecccchhHHHHHHHHHHHHHhCCCCC-EeEEEEEEecCCeEEEEEecCC
Confidence 35676777789999987632 14788998865432 2223356666666665322 245555542 22 5889998
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|.++.. .+.. +. .+-.+..+...+ ..+.+.+..+.
T Consensus 81 ~~~L~~--------------~~~~-~~-------~~~~~~~~~~i~----------------------~~i~~~l~~lh- 115 (253)
T cd05122 81 GGSLKD--------------LLKS-TN-------QTLTESQIAYVC----------------------KELLKGLEYLH- 115 (253)
T ss_pred CCcHHH--------------HHhh-cC-------CCCCHHHHHHHH----------------------HHHHHHHHHhh-
Confidence 865531 0111 00 000111111111 11222222221
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCc
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYR 263 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~ 263 (382)
...++|+|++|.||++++ ++.+.|+||+.+..-.+
T Consensus 116 -------~~~i~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~~~ 150 (253)
T cd05122 116 -------SNGIIHRDIKAANILLTS-DGEVKLIDFGLSAQLSD 150 (253)
T ss_pred -------cCCEecCCCCHHHEEEcc-CCeEEEeeccccccccc
Confidence 146899999999999985 67899999997765443
No 99
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=97.52 E-value=0.00028 Score=67.03 Aligned_cols=29 Identities=21% Similarity=0.297 Sum_probs=25.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.|+||..+.
T Consensus 116 ~ivHrDlkp~Nil~~~-~~~~kl~Dfg~~~ 144 (316)
T cd05620 116 GIIYRDLKLDNVMLDR-DGHIKIADFGMCK 144 (316)
T ss_pred CeEecCCCHHHeEECC-CCCEEeCccCCCe
Confidence 6899999999999975 6789999999765
No 100
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.52 E-value=0.00046 Score=64.77 Aligned_cols=137 Identities=12% Similarity=0.184 Sum_probs=75.1
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCccc-chHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEee
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVI-NRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSFI 139 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~i-dr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~i 139 (382)
.++.|..|..+.+|++..... ...+++|.......... ...+|..+++.+...++ +++++.+. ++ .|++|+
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 23 RFEKIGQGASGTVYTAIDIAT---GQEVAIKQMNLQQQPKKELIINEILVMRENKNPNI-VNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred eeeeeccCCCeEEEEEEECCC---CCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCE-eeEEEEEecCCEEEEeeccc
Confidence 456787788889999975432 13788888754322111 11345555555433333 34554443 22 589999
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
+|.++..- +. .... + +..+..++ ..+...+..|.
T Consensus 99 ~~~~L~~~--------------~~---~~~~-----~--~~~~~~~~----------------------~~l~~~L~~LH 132 (297)
T cd06656 99 AGGSLTDV--------------VT---ETCM-----D--EGQIAAVC----------------------RECLQALDFLH 132 (297)
T ss_pred CCCCHHHH--------------HH---hCCC-----C--HHHHHHHH----------------------HHHHHHHHHHH
Confidence 88654210 10 0000 1 11111111 11222233332
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
+ ..++|+|++|.||+++. ++.+.++||+.+..
T Consensus 133 ~--------~~i~H~dL~p~Nili~~-~~~~~l~Dfg~~~~ 164 (297)
T cd06656 133 S--------NQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQ 164 (297)
T ss_pred H--------CCcccCCCCHHHEEECC-CCCEEECcCccceE
Confidence 1 35899999999999975 67899999997653
No 101
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=97.52 E-value=0.00033 Score=66.90 Aligned_cols=136 Identities=18% Similarity=0.189 Sum_probs=76.5
Q ss_pred EecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC---Cccc-chHHHHHHHHHHHhCCCCceEEEEeCC-c---eEEEee
Q 016788 68 TVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT---DIVI-NRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQSFI 139 (382)
Q Consensus 68 ~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~---~~~i-dr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~e~i 139 (382)
.|..|....+|++..... ...+.+|+..... ...+ ....|..+++.+..+...++++..+.. . +|+||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~ 78 (329)
T cd05588 2 VIGRGSYAKVLLVELKKT---RRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFV 78 (329)
T ss_pred eEeeCCCeEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCC
Confidence 355677788999887543 2468888875421 1111 234666777666555444566666532 2 689999
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
+|..|.. .+.+-+ . .+ ......+. .++...+..|.
T Consensus 79 ~~g~L~~--------------~~~~~~--~-----l~--~~~~~~~~----------------------~qi~~~l~~lH 113 (329)
T cd05588 79 SGGDLMF--------------HMQRQR--K-----LP--EEHARFYS----------------------AEISLALNFLH 113 (329)
T ss_pred CCCCHHH--------------HHHHcC--C-----CC--HHHHHHHH----------------------HHHHHHHHHHH
Confidence 8864411 111100 0 01 11111111 12222233332
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.|||++. ++.+.|+||..+..
T Consensus 114 --------~~~ivH~dlkp~Nili~~-~~~~kL~Dfg~~~~ 145 (329)
T cd05588 114 --------ERGIIYRDLKLDNVLLDA-EGHIKLTDYGMCKE 145 (329)
T ss_pred --------HCCeEecCCCHHHeEECC-CCCEEECcCccccc
Confidence 236899999999999975 67899999997753
No 102
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.52 E-value=0.00068 Score=65.74 Aligned_cols=142 Identities=18% Similarity=0.243 Sum_probs=84.2
Q ss_pred EecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc-ccchHHHHHHHHHHHhCCCCceEEEEeC--Cc---eEEEeecC
Q 016788 68 TVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI-VINRQRELQAIKYLSAAGFGAKLLAVFG--NG---MVQSFINA 141 (382)
Q Consensus 68 ~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~-~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g---~i~e~i~G 141 (382)
.|..|-...+|+-...++. .+.||........ .-+-.+|..++..+...++ -+++|++. ++ +|+||++.
T Consensus 82 ~ig~Ggfg~VYkG~l~~~~----~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nl-v~LlGyC~e~~~~~~LVYEym~n 156 (361)
T KOG1187|consen 82 LIGEGGFGTVYKGVLSDGT----VVAVKRLSSNSGQGEREFLNEVEILSRLRHPNL-VKLLGYCLEGGEHRLLVYEYMPN 156 (361)
T ss_pred ceecCCCeEEEEEEECCCC----EEEEEEecCCCCcchhHHHHHHHHHhcCCCcCc-ccEEEEEecCCceEEEEEEccCC
Confidence 4555668899999998863 6778865443322 2234567766666663333 46777752 31 59999975
Q ss_pred CcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHH
Q 016788 142 RTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKEL 221 (382)
Q Consensus 142 ~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 221 (382)
.+|.. .||..... |-.|. .++.- .-.+...+..|.
T Consensus 157 GsL~d-----------------~L~~~~~~----~L~W~------~R~kI----------------a~g~A~gL~yLH-- 191 (361)
T KOG1187|consen 157 GSLED-----------------HLHGKKGE----PLDWE------TRLKI----------------ALGAARGLAYLH-- 191 (361)
T ss_pred CCHHH-----------------HhCCCCCC----CCCHH------HHHHH----------------HHHHHHHHHHHc--
Confidence 45532 23432211 22343 22210 001112233332
Q ss_pred hcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCc
Q 016788 222 AGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYR 263 (382)
Q Consensus 222 ~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~ 263 (382)
...++.++|+|+++.|||+++ +-...|-||..|..++.
T Consensus 192 ---~~~~~~iiHrDiKssNILLD~-~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 192 ---EGCPPPIIHRDIKSSNILLDE-DFNAKLSDFGLAKLGPE 229 (361)
T ss_pred ---cCCCCCEecCCCCHHHeeECC-CCCEEccCccCcccCCc
Confidence 234558999999999999974 67899999999977765
No 103
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=97.51 E-value=0.00036 Score=66.60 Aligned_cols=135 Identities=18% Similarity=0.206 Sum_probs=75.5
Q ss_pred EecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCC--c--eEEEee
Q 016788 68 TVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGN--G--MVQSFI 139 (382)
Q Consensus 68 ~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~--g--~i~e~i 139 (382)
.|..|....+|++...... ..+.+|+..... ...-....|..++..+..+...++++..+.. . +|+||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKND---QIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYV 78 (327)
T ss_pred eeeeCCCeEEEEEEECCCC---CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence 3566777899999875432 367788775421 1111124566666666554444566655432 2 689999
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
+|..|.. .+.+ ... .+ ......+. .++...+..+.
T Consensus 79 ~~~~L~~--------------~~~~--~~~-----l~--~~~~~~~~----------------------~qi~~al~~lH 113 (327)
T cd05617 79 NGGDLMF--------------HMQR--QRK-----LP--EEHARFYA----------------------AEICIALNFLH 113 (327)
T ss_pred CCCcHHH--------------HHHH--cCC-----CC--HHHHHHHH----------------------HHHHHHHHHHH
Confidence 8865421 0100 000 01 11111111 12222233332
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
+ ..++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 114 ~--------~~ivHrDlkp~Nili~~-~~~~kl~Dfg~~~ 144 (327)
T cd05617 114 E--------RGIIYRDLKLDNVLLDA-DGHIKLTDYGMCK 144 (327)
T ss_pred H--------CCeeccCCCHHHEEEeC-CCCEEEeccccce
Confidence 1 36899999999999975 6789999998765
No 104
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=97.50 E-value=0.00034 Score=66.67 Aligned_cols=137 Identities=15% Similarity=0.170 Sum_probs=76.7
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e 137 (382)
++.|..|....+|++..... ...+.+|+..... ........|..++..+......++++..+. +. +|+|
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGT---DELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred EEEEEecCCeEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 45677888899999976542 2468888875321 111112345555555544444556665543 22 5899
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|..|.. .+.+... .+ ......+. .++...+..
T Consensus 82 y~~~g~L~~--------------~i~~~~~-------l~--~~~~~~i~----------------------~qi~~al~~ 116 (323)
T cd05615 82 YVNGGDLMY--------------HIQQVGK-------FK--EPQAVFYA----------------------AEISVGLFF 116 (323)
T ss_pred CCCCCcHHH--------------HHHHcCC-------CC--HHHHHHHH----------------------HHHHHHHHH
Confidence 998864421 1111000 00 11111111 122222333
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
|. ...++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 117 lH--------~~~ivHrDikp~Nill~~-~~~ikL~Dfg~~~ 149 (323)
T cd05615 117 LH--------RRGIIYRDLKLDNVMLDS-EGHIKIADFGMCK 149 (323)
T ss_pred HH--------HCCeeccCCCHHHeEECC-CCCEEEecccccc
Confidence 32 136899999999999975 6789999998765
No 105
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.50 E-value=0.0012 Score=60.21 Aligned_cols=137 Identities=18% Similarity=0.216 Sum_probs=78.2
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCC----ceEEEeecC
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGN----GMVQSFINA 141 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~----g~i~e~i~G 141 (382)
++.|..|....+|++...++ ..+.+|..........+...|..+++.+...++. ++++.+.. ..|++|++|
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~----~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRAQ----IKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLV-QLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred eeEecCCcCceEEEEEeccC----ceEEEEecccCCccHHHHHHHHHHHHHCCCCCce-eEEEEEccCCCEEEEEEcCCC
Confidence 35677787889999877554 3688887654322122335677777777654443 44544432 268999987
Q ss_pred CcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHH
Q 016788 142 RTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKEL 221 (382)
Q Consensus 142 ~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 221 (382)
..+.. .+|... . ..+ +.....+. ..+...+..+.
T Consensus 84 ~~L~~-----------------~~~~~~--~-~~~--~~~~~~~~----------------------~~i~~~l~~lH-- 117 (256)
T cd05114 84 GCLLN-----------------YLRQRQ--G-KLS--KDMLLSMC----------------------QDVCEGMEYLE-- 117 (256)
T ss_pred CcHHH-----------------HHHhCc--c-CCC--HHHHHHHH----------------------HHHHHHHHHHH--
Confidence 65421 111110 0 001 11111111 11222232222
Q ss_pred hcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 222 AGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 222 ~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||++++ ++.+.++||+.+..
T Consensus 118 ------~~~i~H~dl~p~ni~i~~-~~~~kl~d~g~~~~ 149 (256)
T cd05114 118 ------RNSFIHRDLAARNCLVSS-TGVVKVSDFGMTRY 149 (256)
T ss_pred ------HCCccccccCcceEEEcC-CCeEEECCCCCccc
Confidence 125899999999999975 67899999997754
No 106
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.49 E-value=0.00073 Score=61.62 Aligned_cols=138 Identities=18% Similarity=0.194 Sum_probs=77.5
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeC--Cc--eEEEeecCC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFG--NG--MVQSFINAR 142 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g--~i~e~i~G~ 142 (382)
+.+..|....+|++...+. .+++|.........-...+|..+++.+...++ .++++... +. +|++|.+|.
T Consensus 12 ~~ig~g~~g~v~~~~~~~~-----~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~v~e~~~~~ 85 (256)
T cd05039 12 ATIGKGEFGDVMLGDYRGQ-----KVAVKCLKDDSTAAQAFLAEASVMTTLRHPNL-VQLLGVVLQGNPLYIVTEYMAKG 85 (256)
T ss_pred eeeecCCCceEEEEEecCc-----EEEEEEeccchhHHHHHHHHHHHHHhcCCcce-eeeEEEEcCCCCeEEEEEecCCC
Confidence 5667777789999877643 68899876543211122456666666654444 34444432 22 689999875
Q ss_pred cCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHh
Q 016788 143 TLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELA 222 (382)
Q Consensus 143 ~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 222 (382)
++.. .+..-.. ..-.+.....++ .++...+..+.
T Consensus 86 ~L~~--------------~~~~~~~-------~~~~~~~~~~~~----------------------~qi~~~l~~lh--- 119 (256)
T cd05039 86 SLVD--------------YLRSRGR-------AVITLAQQLGFA----------------------LDVCEGMEYLE--- 119 (256)
T ss_pred cHHH--------------HHHhcCC-------CCCCHHHHHHHH----------------------HHHHHHHHHHH---
Confidence 4421 1111000 000111111111 11222222222
Q ss_pred cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 223 GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 223 ~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
...++|+|++|.||++++ ++.+.++||+.+....
T Consensus 120 -----~~~i~H~di~p~Nili~~-~~~~~l~d~g~~~~~~ 153 (256)
T cd05039 120 -----EKNFVHRDLAARNVLVSE-DLVAKVSDFGLAKEAS 153 (256)
T ss_pred -----hCCccchhcccceEEEeC-CCCEEEcccccccccc
Confidence 236899999999999975 6789999999887653
No 107
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.49 E-value=0.00056 Score=62.11 Aligned_cols=142 Identities=21% Similarity=0.284 Sum_probs=78.5
Q ss_pred EEecceeeeeEEEEEecCCC-CCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEee
Q 016788 67 DTVSGGITNLLLKVTVKEES-GNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSFI 139 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~-~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~i 139 (382)
+.+..|....+|++...+.. .....+++|+...... ..-....|...++.+...++ ++++..+. ++ .|++|+
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~i~e~~ 83 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNI-VKLLGVCTEEEPLMIVMEYM 83 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCch-heEEEEEcCCCeeEEEEecc
Confidence 46677878889998876521 1124688888765432 12233567777777743333 45555443 22 588999
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
+|.++... .. . .. +. ..+ +..+..++ .++...+..+.
T Consensus 84 ~~~~l~~~-------~~-------~---~~-~~-~~~--~~~~~~~~----------------------~ql~~~l~~lh 120 (258)
T smart00219 84 EGGDLLDY-------LR-------K---NR-PK-ELS--LSDLLSFA----------------------LQIARGMEYLE 120 (258)
T ss_pred CCCCHHHH-------HH-------h---hh-hc-cCC--HHHHHHHH----------------------HHHHHHHHHHh
Confidence 88544211 10 0 00 00 000 11111111 11222222221
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
...++|+|++|+||++++ ++.+.++||+.+...
T Consensus 121 --------~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~ 153 (258)
T smart00219 121 --------SKNFIHRDLAARNCLVGE-NLVVKISDFGLSRDL 153 (258)
T ss_pred --------cCCeeecccccceEEEcc-CCeEEEcccCCceec
Confidence 226799999999999975 678999999987654
No 108
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=97.49 E-value=0.00047 Score=65.86 Aligned_cols=30 Identities=20% Similarity=0.284 Sum_probs=26.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 115 ~ivHrDikp~NIll~~-~~~~kL~DfG~~~~ 144 (328)
T cd05593 115 KIVYRDLKLENLMLDK-DGHIKITDFGLCKE 144 (328)
T ss_pred CeEecccCHHHeEECC-CCcEEEecCcCCcc
Confidence 6899999999999975 67899999997754
No 109
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.46 E-value=0.00089 Score=60.79 Aligned_cols=148 Identities=21% Similarity=0.264 Sum_probs=77.8
Q ss_pred ecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCC----ceEEEeecCC
Q 016788 69 VSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGN----GMVQSFINAR 142 (382)
Q Consensus 69 l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~----g~i~e~i~G~ 142 (382)
|..|....+|++...........+.+|+....... .-....|...+..+....+ ++++....+ .+|++|.+|.
T Consensus 3 ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 3 LGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNV-VRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred cccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCCh-heeeeeecCCCceEEEEEeccCC
Confidence 45566678898887643112247888887654321 1223456666666663223 455555432 2689999887
Q ss_pred cCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHh
Q 016788 143 TLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELA 222 (382)
Q Consensus 143 ~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 222 (382)
++... +.............+-.+.....++ ..+...+..|.
T Consensus 82 ~L~~~--------------l~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~l~~al~~lH--- 122 (262)
T cd00192 82 DLLDY--------------LRKSRPVFPSPEKSTLSLKDLLSFA----------------------IQIAKGMEYLA--- 122 (262)
T ss_pred cHHHH--------------HhhccccccccccccCCHHHHHHHH----------------------HHHHHHHHHHH---
Confidence 65321 1110000000000000111111111 11222222221
Q ss_pred cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 223 GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 223 ~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
...++|+|+.|.||++++ ++.+.++||..+....
T Consensus 123 -----~~~i~H~di~p~nili~~-~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 123 -----SKKFVHRDLAARNCLVGE-DLVVKISDFGLSRDVY 156 (262)
T ss_pred -----cCCcccCccCcceEEECC-CCcEEEcccccccccc
Confidence 246899999999999975 6889999999886544
No 110
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=97.45 E-value=0.0005 Score=65.08 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=26.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 113 ~i~HrDlkp~Nili~~-~~~~kl~Dfg~~~~ 142 (312)
T cd05585 113 NVIYRDLKPENILLDY-QGHIALCDFGLCKL 142 (312)
T ss_pred CeEeCCCCHHHeEECC-CCcEEEEECccccc
Confidence 5899999999999975 67899999998765
No 111
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=97.45 E-value=0.00036 Score=66.26 Aligned_cols=135 Identities=16% Similarity=0.171 Sum_probs=75.9
Q ss_pred ecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEeec
Q 016788 69 VSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSFIN 140 (382)
Q Consensus 69 l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~i~ 140 (382)
|..|....+|++..... ...+.+|+..... ........|..+++.+..+...+++++.+... +|+||++
T Consensus 3 lG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 79 (318)
T cd05570 3 LGKGSFGKVLLAELKGT---DELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN 79 (318)
T ss_pred eeeCCCeEEEEEEECCC---CCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 55566678999987543 2368888875321 11112245666666665444456777765322 5899998
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|..|.. .+.+-.. .+ +.....++ .++...+..|.
T Consensus 80 ~~~L~~--------------~~~~~~~-------l~--~~~~~~~~----------------------~qi~~~l~~LH- 113 (318)
T cd05570 80 GGDLMF--------------HIQRSGR-------FD--EPRARFYA----------------------AEIVLGLQFLH- 113 (318)
T ss_pred CCCHHH--------------HHHHcCC-------CC--HHHHHHHH----------------------HHHHHHHHHHH-
Confidence 864421 0111000 01 11111111 12222233232
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||++++ ++.+.|+||..+..
T Consensus 114 -------~~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~ 145 (318)
T cd05570 114 -------ERGIIYRDLKLDNVLLDS-EGHIKIADFGMCKE 145 (318)
T ss_pred -------hCCeEccCCCHHHeEECC-CCcEEecccCCCee
Confidence 236899999999999975 67899999997753
No 112
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.45 E-value=0.00049 Score=62.85 Aligned_cols=136 Identities=15% Similarity=0.182 Sum_probs=75.1
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEEEeecCC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQSFINAR 142 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~e~i~G~ 142 (382)
+.+..|....+|++....+ ..+++|+.........+...|..+++.+...++ +++++.+.. + .|+||++|.
T Consensus 10 ~~lg~G~~~~v~~~~~~~~----~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGK----IDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNL-VQLYGVCTKQRPIFIVTEYMANG 84 (256)
T ss_pred hhhccCCCceEEEeEecCC----ccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCE-EEEEEEEcCCCceEEEEecCCCC
Confidence 4566777788999876543 368899875432211123457666666643332 455555432 2 688999886
Q ss_pred cCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHh
Q 016788 143 TLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELA 222 (382)
Q Consensus 143 ~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 222 (382)
.+.. . ++.... ...+.....+. .++...+..|.+
T Consensus 85 ~L~~--------------~---l~~~~~-----~~~~~~~~~i~----------------------~qi~~~l~~lH~-- 118 (256)
T cd05059 85 CLLN--------------Y---LRERKG-----KLGTEWLLDMC----------------------SDVCEAMEYLES-- 118 (256)
T ss_pred CHHH--------------H---HHhccc-----CCCHHHHHHHH----------------------HHHHHHHHHHHH--
Confidence 5421 0 111000 00111111111 112222332321
Q ss_pred cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 223 GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 223 ~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.||++++ ++.+.++||+.+..
T Consensus 119 ------~~i~H~dl~p~ni~i~~-~~~~kl~dfg~~~~ 149 (256)
T cd05059 119 ------NGFIHRDLAARNCLVGE-DNVVKVSDFGLARY 149 (256)
T ss_pred ------CCcccccccHhhEEECC-CCcEEECCccccee
Confidence 24799999999999975 67899999987653
No 113
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=97.45 E-value=0.001 Score=63.47 Aligned_cols=138 Identities=15% Similarity=0.214 Sum_probs=77.6
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~ 136 (382)
.+..|..|....+|++..... ...+++|+..... ........|..++..+....+ +++++.+.++ +|+
T Consensus 5 ~~~~ig~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-v~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 5 ILTQVGQGGYGQVFLAKKKDT---GEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWL-VKLLYAFQDDEYLYLAM 80 (333)
T ss_pred EEEEEeecCCeEEEEEEECCC---CCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCC-ccEEEEEEcCCEEEEEE
Confidence 356777888889999987542 1378889875421 111123456666665543333 4555554322 689
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|.+|.. .+ +... ..+ ......++ .++...+.
T Consensus 81 e~~~g~~L~~--------------~l---~~~~----~l~--~~~~~~~~----------------------~qi~~~l~ 115 (333)
T cd05600 81 EYVPGGDFRT--------------LL---NNLG----VLS--EDHARFYM----------------------AEMFEAVD 115 (333)
T ss_pred eCCCCCCHHH--------------HH---HHcC----CCC--HHHHHHHH----------------------HHHHHHHH
Confidence 9998865421 01 1100 000 11111111 11222233
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.|.+ ..++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 116 ~lH~--------~~ivH~dlkp~Nil~~~-~~~~kL~Dfg~a~~ 150 (333)
T cd05600 116 ALHE--------LGYIHRDLKPENFLIDA-SGHIKLTDFGLSKG 150 (333)
T ss_pred HHHH--------CCccccCCCHHHEEECC-CCCEEEEeCcCCcc
Confidence 2321 25899999999999975 67899999997754
No 114
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.45 E-value=0.0015 Score=60.88 Aligned_cols=140 Identities=16% Similarity=0.205 Sum_probs=77.7
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC---cc--cchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD---IV--INRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQ 136 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~---~~--idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~ 136 (382)
...+..|....+|++....+..++..+.+|+...... .. -....|..+++.+..+...++++..+. ++ +|+
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLIL 84 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEE
Confidence 3567777778899987643222234788888754221 11 112457777777765444455555543 22 689
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|.++.. .+.. . .+.....+..++ .++.+.+.
T Consensus 85 e~~~~~~L~~--------------~l~~--~-------~~l~~~~~~~~~----------------------~qi~~al~ 119 (290)
T cd05613 85 DYINGGELFT--------------HLSQ--R-------ERFKEQEVQIYS----------------------GEIVLALE 119 (290)
T ss_pred ecCCCCcHHH--------------HHHH--c-------CCCCHHHHHHHH----------------------HHHHHHHH
Confidence 9998865421 0110 0 000011111111 11222232
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.|. ...++|+|++|.|||+++ ++.+.|+||+.+.
T Consensus 120 ~lH--------~~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~ 153 (290)
T cd05613 120 HLH--------KLGIIYRDIKLENILLDS-NGHVVLTDFGLSK 153 (290)
T ss_pred HHH--------hCCeeccCCCHHHeEECC-CCCEEEeeCccce
Confidence 222 135899999999999975 6789999998664
No 115
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.44 E-value=0.0019 Score=61.69 Aligned_cols=76 Identities=16% Similarity=0.248 Sum_probs=45.6
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC-c-ccchHHHHHHHHHHHhCCCCceEEEEe-CCc---eEEEe
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD-I-VINRQRELQAIKYLSAAGFGAKLLAVF-GNG---MVQSF 138 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~-~-~idr~~E~~~l~~l~~~gl~P~~~~~~-~~g---~i~e~ 138 (382)
.++.|..|....+|++...... ..+.+|+...... . .-...+|..+++.+...++ .++++.+ .++ +|++|
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~---~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 9 RISELGAGNGGVVTKVQHKPSG---LIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-VGFYGAFYSDGEISICMEH 84 (331)
T ss_pred EEEeecCCCCEEEEEEEECCCC---cEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCC-CeEEEEEEECCEEEEEeec
Confidence 4567888888899999875431 3577777654321 1 1123567777766654343 3455543 222 68999
Q ss_pred ecCCcC
Q 016788 139 INARTL 144 (382)
Q Consensus 139 i~G~~l 144 (382)
++|..|
T Consensus 85 ~~~~~L 90 (331)
T cd06649 85 MDGGSL 90 (331)
T ss_pred CCCCcH
Confidence 988655
No 116
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.44 E-value=0.0019 Score=60.16 Aligned_cols=76 Identities=21% Similarity=0.337 Sum_probs=46.2
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeC--C----c---eEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFG--N----G---MVQ 136 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~--~----g---~i~ 136 (382)
+..+..|....+|++..... ...+++|+.............|..+++.+.++.-.+++++.+. + + .|+
T Consensus 27 ~~~l~~g~~~~vy~~~~~~~---~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ 103 (291)
T cd06639 27 IETIGKGTYGKVYKVTNKKD---GSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVL 103 (291)
T ss_pred EEEeecCCCeEEEEEEECCC---CCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEE
Confidence 45677777789999887543 2468888875432221223467777777754433355655431 1 1 589
Q ss_pred EeecCCcC
Q 016788 137 SFINARTL 144 (382)
Q Consensus 137 e~i~G~~l 144 (382)
+|++|.++
T Consensus 104 ey~~~~sL 111 (291)
T cd06639 104 ELCNGGSV 111 (291)
T ss_pred EECCCCcH
Confidence 99988655
No 117
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=97.43 E-value=0.00054 Score=66.72 Aligned_cols=137 Identities=15% Similarity=0.214 Sum_probs=76.2
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~ 136 (382)
.++.|..|....+|++..... ...+.+|+..... ...-...+|..+++.+.... .+++++.+.++ +|+
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 5 TVKVIGKGAFGEVRLVQKKDT---GKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPW-VVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred EeEEEeecCCEEEEEEEECCC---CCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCC-cceEEEEEEcCCeeEEEE
Confidence 356777788889999876533 2468888764321 11111245666665554332 35666655332 689
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|..|.. .+..... .+ ...+..++ .++...+.
T Consensus 81 E~~~gg~L~~--------------~l~~~~~-------~~--~~~~~~~~----------------------~ql~~aL~ 115 (377)
T cd05629 81 EFLPGGDLMT--------------MLIKYDT-------FS--EDVTRFYM----------------------AECVLAIE 115 (377)
T ss_pred eCCCCCcHHH--------------HHHhcCC-------CC--HHHHHHHH----------------------HHHHHHHH
Confidence 9998865421 1111000 01 01111111 11222222
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.|. ...++|+|++|.|||++. ++.+.++||..+.
T Consensus 116 ~LH--------~~givHrDlkp~NIll~~-~~~~kl~DfGla~ 149 (377)
T cd05629 116 AVH--------KLGFIHRDIKPDNILIDR-GGHIKLSDFGLST 149 (377)
T ss_pred HHH--------hCCeeccCCCHHHEEECC-CCCEEEeeccccc
Confidence 222 236899999999999975 6789999999875
No 118
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=97.43 E-value=0.00068 Score=64.53 Aligned_cols=137 Identities=14% Similarity=0.105 Sum_probs=76.0
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCC--CceEEEEeCCc----eE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGF--GAKLLAVFGNG----MV 135 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl--~P~~~~~~~~g----~i 135 (382)
+..|..|....+|++..... ...+++|+..... ...-....|..++..+..... ..++++.+..+ +|
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKT---GELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred EEEEeecCCEEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 45677788889999876532 2478888875321 111122455555555544222 24666655322 68
Q ss_pred EEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHH
Q 016788 136 QSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEI 215 (382)
Q Consensus 136 ~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (382)
+||++|..+.. .++.... + +.....++ .++...+
T Consensus 81 ~E~~~~~~L~~-----------------~~~~~~l-----~--~~~~~~~~----------------------~qi~~al 114 (324)
T cd05589 81 MEYAAGGDLMM-----------------HIHTDVF-----S--EPRAVFYA----------------------ACVVLGL 114 (324)
T ss_pred EcCCCCCcHHH-----------------HhhcCCC-----C--HHHHHHHH----------------------HHHHHHH
Confidence 99998854411 1111000 0 11111111 1122222
Q ss_pred HHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 216 VELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 216 ~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..|. ...++|+|++|.||++++ ++.+.|+||..+..
T Consensus 115 ~~lH--------~~~ivHrdlkp~Nill~~-~~~~kL~Dfg~~~~ 150 (324)
T cd05589 115 QYLH--------ENKIVYRDLKLDNLLLDT-EGFVKIADFGLCKE 150 (324)
T ss_pred HHHH--------hCCeEecCCCHHHeEECC-CCcEEeCcccCCcc
Confidence 2222 135899999999999975 67899999997653
No 119
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=97.43 E-value=0.00038 Score=67.34 Aligned_cols=136 Identities=13% Similarity=0.198 Sum_probs=76.8
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e 137 (382)
++.|..|....+|++..... +..+++|+..... .......+|..+++.+.... .+++++.+.++ +|+|
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~-iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDT---GHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPW-VVKLYYSFQDENYLYLIME 81 (364)
T ss_pred EEEEEecCCEEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCC-CcceEEEEEcCCeEEEEEC
Confidence 56777888889999887543 2378889875321 11112345777776665322 34566555322 5889
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|..|.. .+ +... ..+ ...+..++ .++...+..
T Consensus 82 ~~~~g~L~~--------------~l---~~~~----~l~--~~~~~~~~----------------------~qi~~aL~~ 116 (364)
T cd05599 82 YLPGGDMMT--------------LL---MKKD----TFT--EEETRFYI----------------------AETILAIDS 116 (364)
T ss_pred CCCCcHHHH--------------HH---HHcC----CCC--HHHHHHHH----------------------HHHHHHHHH
Confidence 988754321 11 1100 000 11111111 122222333
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
+.+ ..++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 117 lH~--------~~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~~~ 149 (364)
T cd05599 117 IHK--------LGYIHRDIKPDNLLLDA-KGHIKLSDFGLCT 149 (364)
T ss_pred HHH--------CCeEeccCCHHHeEECC-CCCEEEeecccce
Confidence 321 25899999999999975 6789999999774
No 120
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=97.43 E-value=0.00062 Score=64.78 Aligned_cols=29 Identities=21% Similarity=0.315 Sum_probs=25.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 121 ~ivHrDlkp~Nill~~-~~~~kL~DfG~~~ 149 (323)
T cd05616 121 GIIYRDLKLDNVMLDS-EGHIKIADFGMCK 149 (323)
T ss_pred CEEecCCCHHHeEECC-CCcEEEccCCCce
Confidence 6899999999999975 6789999998765
No 121
>PRK14705 glycogen branching enzyme; Provisional
Probab=97.43 E-value=0.00087 Score=73.52 Aligned_cols=220 Identities=15% Similarity=0.092 Sum_probs=116.9
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC--ceEEEEe----------CC
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG--AKLLAVF----------GN 132 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~--P~~~~~~----------~~ 132 (382)
.+..+++-.||+...+...+ .++|+|+++.-.. -++ =|.++.+.|.+.|.+ |.+++.. .+
T Consensus 148 ~~r~l~~EQSNTSvi~gd~~-----~~~ilKlfRrl~~-G~N--PdvE~~r~Lteag~~~vP~llG~ve~~~~~~~~~~~ 219 (1224)
T PRK14705 148 SVKVLSGEQSNTSVIVDDGD-----SAAIVKFFRVLSA-GKN--PEVELGAALTAAGTSEVPATLGWVTGEWDGPASNAG 219 (1224)
T ss_pred CccccccccCceEEEECCCC-----ccEEEEEeeecCC-CCC--ccHHHHHHHhhCCCccCCCccEEEEEeecccccccC
Confidence 44667777889887765422 2699999976432 233 356677888887764 8777652 11
Q ss_pred ----------ceEEEeecCC----cCCccccCC----hHHHHHHHHHHHHHhcccCCCCCCCc----chhhHHHHHHHhc
Q 016788 133 ----------GMVQSFINAR----TLTPADMRN----PKLAAEIAKQLRRFHQVEIPGSKEPQ----LWNDVSKFFEKAS 190 (382)
Q Consensus 133 ----------g~i~e~i~G~----~l~~~~~~~----~~~~~~ia~~La~lH~~~~~~~~~p~----~~~~~~~~~~~~~ 190 (382)
|++.+|+++. .++.+.+.. ...+..+|+..|+||..-......|. .......+.+++.
T Consensus 220 ~~~~~~~~tLa~lq~fv~n~gDgW~~tl~~l~r~~~f~~~a~~LG~rtAemH~aLA~~~~~~~f~~~~~~~~~~~~~rL~ 299 (1224)
T PRK14705 220 ATARAVTGELAVAHEFLAGGLDAWRLAVDAAASGKDFTAEARALGAATATVHRRLAETLGTHDGQEQGPDIAAGVARRVR 299 (1224)
T ss_pred CccccCceeHHHHHHhhcCCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCCCcccccCHHHHHHHHHHHHH
Confidence 2366788653 111111110 13467899999999984321111111 1111233333322
Q ss_pred cC-CCCcHHHhhcccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCC----CCEEEEEeec--------
Q 016788 191 SL-KFDEIEKQSMYETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQ----EKLYLIDFEY-------- 257 (382)
Q Consensus 191 ~~-~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~----~~~~lIDfE~-------- 257 (382)
.. ....... . ..-+.|.+.+..|... ......=||||+|.|.||+..++ +...|||||=
T Consensus 300 ~~~~~~~~~~---~--~~~~~l~~~~~~l~~~---~~~~~~RIHGD~HLGQVL~t~~D~~~~~~~~IIDFEGEP~RpL~E 371 (1224)
T PRK14705 300 GSWAEAGPAV---G--PYDHALDELLSALDGR---NAGQLQRIHGDLHLGQILQVPGAEGQPERWAILDFEGEPLRPIDE 371 (1224)
T ss_pred HHHhhCCHHH---H--HHHHHHHHHHHHHhcc---CccceEEEecccccccEEEecCCCCccCCEEEEecCCCCCCChhh
Confidence 10 0000000 0 0012233333333221 22467889999999999986432 3599999983
Q ss_pred -CCCCCchhhHHhhhhhcCc--cc-cCCC-------CCCCHHHHHHHHHHhcCCC
Q 016788 258 -GSYNYRGYDIGNHFSEYAG--YD-CDYS-------LYPNKDEQNHFFRHYLRPD 301 (382)
Q Consensus 258 -a~~~~~~~Dla~~~~e~~~--~~-~~~~-------~~p~~~~~~~fl~~Y~~~~ 301 (382)
-....|.-|+|-++..+-. .. .... .+ ....+..||++|....
T Consensus 372 RR~k~sPLRDVAGMLRSFdYAa~~~l~~~~~~~~a~~W-~~~~~~aFL~gY~~~~ 425 (1224)
T PRK14705 372 RNSPDVPLRDVTGMLRSFDYAAGAATRENEGAHVPESW-VDDCAAAFLAGYSEVT 425 (1224)
T ss_pred hccCCChHHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHHHHHHHHHHHhc
Confidence 1235678899988866420 00 0000 00 1123577999998754
No 122
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=97.43 E-value=0.00057 Score=66.12 Aligned_cols=137 Identities=15% Similarity=0.217 Sum_probs=75.5
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~ 136 (382)
.++.|..|....+|++..... ...+.+|+..... ........|..++..+.... .++++..+.+ + +|+
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 5 SLKVIGRGAFGEVRLVQKKDT---GHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW-VVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred EEEEEeeCCCEEEEEEEECCC---CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCC-EeeEEEEEEcCCEEEEEE
Confidence 356777788889999987543 2468888765321 11112244665555543222 2455555432 2 689
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|..|.. .+.+ .. ..+ ......++. ++...+.
T Consensus 81 E~~~gg~L~~--------------~l~~---~~----~l~--~~~~~~~~~----------------------qi~~~L~ 115 (360)
T cd05627 81 EFLPGGDMMT--------------LLMK---KD----TLS--EEATQFYIA----------------------ETVLAID 115 (360)
T ss_pred eCCCCccHHH--------------HHHh---cC----CCC--HHHHHHHHH----------------------HHHHHHH
Confidence 9998864421 1111 00 001 011111111 1222222
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.|. ...++|+|++|.|||++. ++.+.|+||+.+.
T Consensus 116 ~lH--------~~givHrDLkp~NIli~~-~~~vkL~DfG~~~ 149 (360)
T cd05627 116 AIH--------QLGFIHRDIKPDNLLLDA-KGHVKLSDFGLCT 149 (360)
T ss_pred HHH--------HCCeEccCCCHHHEEECC-CCCEEEeeccCCc
Confidence 222 236899999999999975 6889999999875
No 123
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.42 E-value=0.0011 Score=61.89 Aligned_cols=75 Identities=15% Similarity=0.220 Sum_probs=44.2
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc-ccchHHHHHHHHHHHhCCCCceEEEEe-CCc---eEEEeec
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI-VINRQRELQAIKYLSAAGFGAKLLAVF-GNG---MVQSFIN 140 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~-~idr~~E~~~l~~l~~~gl~P~~~~~~-~~g---~i~e~i~ 140 (382)
++.+..|....+|++..... ...+++|+....... ..+...|..+++.+...+ .+++++.+ .++ .|++|++
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~~~ 92 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKET---GALAAAKVIETKSEEELEDYMVEIEILATCNHPY-IVKLLGAFYWDGKLWIMIEFCP 92 (292)
T ss_pred hheecCCCCeEEEEEEECCC---CceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCc-EeeeEEEEEeCCeEEEEEecCC
Confidence 45677788889999977543 146888887654321 112234555555544322 24555543 222 6899998
Q ss_pred CCcC
Q 016788 141 ARTL 144 (382)
Q Consensus 141 G~~l 144 (382)
|..+
T Consensus 93 ~~~l 96 (292)
T cd06644 93 GGAV 96 (292)
T ss_pred CCcH
Confidence 8654
No 124
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=97.41 E-value=0.00057 Score=64.89 Aligned_cols=30 Identities=17% Similarity=0.250 Sum_probs=26.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||++. ++.+.|+||..|..
T Consensus 116 ~ivH~dlkp~Nill~~-~~~~kL~Dfg~a~~ 145 (316)
T cd05592 116 GIIYRDLKLDNVLLDK-DGHIKIADFGMCKE 145 (316)
T ss_pred CEEeCCCCHHHeEECC-CCCEEEccCcCCeE
Confidence 6899999999999975 67899999998753
No 125
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=97.41 E-value=0.0014 Score=64.63 Aligned_cols=137 Identities=12% Similarity=0.233 Sum_probs=82.1
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~ 136 (382)
.+++|+.|--..||.+.-.+. +.-|-+|+-.+.. ........|..+|.. ++.....++|+.|.+. +||
T Consensus 145 ~Lk~IgkGAfGeVrLarKk~T---g~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~-~ds~~vVKLyYsFQD~~~LYLiM 220 (550)
T KOG0605|consen 145 LLKVIGKGAFGEVRLARKKDT---GEIYAMKILKKSEMLKKNQVEHVRAERDILAE-VDSPWVVKLYYSFQDKEYLYLIM 220 (550)
T ss_pred hheeeccccceeEEEEEEccC---CcEEeeecccHHHHHhhhhHHHHHHHHHHhhh-cCCCcEEEEEEEecCCCeeEEEE
Confidence 468889999999999986543 2357788765431 112233456666555 4444557889888765 699
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||+||-.+- ..|.+.-. .+.-|. ..|+... .-.++
T Consensus 221 EylPGGD~m--------------TLL~~~~~-------L~e~~a--rfYiaE~----------------------vlAI~ 255 (550)
T KOG0605|consen 221 EYLPGGDMM--------------TLLMRKDT-------LTEDWA--RFYIAET----------------------VLAIE 255 (550)
T ss_pred EecCCccHH--------------HHHHhcCc-------CchHHH--HHHHHHH----------------------HHHHH
Confidence 999995221 11111100 111121 1122111 01111
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.+ ....++|+|++|.|+|++. .|-+.|=||..|.
T Consensus 256 ~i--------H~~gyIHRDIKPdNlLiD~-~GHiKLSDFGLs~ 289 (550)
T KOG0605|consen 256 SI--------HQLGYIHRDIKPDNLLIDA-KGHIKLSDFGLST 289 (550)
T ss_pred HH--------HHcCcccccCChhheeecC-CCCEeeccccccc
Confidence 12 2358999999999999975 6889999999884
No 126
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=97.41 E-value=0.001 Score=62.80 Aligned_cols=148 Identities=18% Similarity=0.323 Sum_probs=81.5
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCccc--chHHHHHHHHHHHhCCCCceEEEEe-CCc----eEEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVI--NRQRELQAIKYLSAAGFGAKLLAVF-GNG----MVQS 137 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~i--dr~~E~~~l~~l~~~gl~P~~~~~~-~~g----~i~e 137 (382)
.+..|..|....||+|...... .-+.+|+-.-+.+.-+ ...+|+++++.. +....-+.|+.| .+| +++|
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~---~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTG---KIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCC---eEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEeehh
Confidence 5677888999999999887542 2455565422222111 124555554433 221223455554 344 4789
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|.+|..|+. +...++ .-| +..+..+. ..+..-+..
T Consensus 159 YMDgGSLd~-------~~k~~g--------------~i~------E~~L~~ia------------------~~VL~GL~Y 193 (364)
T KOG0581|consen 159 YMDGGSLDD-------ILKRVG--------------RIP------EPVLGKIA------------------RAVLRGLSY 193 (364)
T ss_pred hcCCCCHHH-------HHhhcC--------------CCC------HHHHHHHH------------------HHHHHHHHH
Confidence 999976642 111110 011 11111110 112222222
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhh
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHF 271 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~ 271 (382)
| ....-++|+|++|.|||++. .|.+.|-||.-++.-... +|+.|
T Consensus 194 L-------h~~~~IIHRDIKPsNlLvNs-kGeVKicDFGVS~~lvnS--~a~tf 237 (364)
T KOG0581|consen 194 L-------HEERKIIHRDIKPSNLLVNS-KGEVKICDFGVSGILVNS--IANTF 237 (364)
T ss_pred H-------hhccCeeeccCCHHHeeecc-CCCEEeccccccHHhhhh--hcccc
Confidence 2 22357899999999999986 789999999988764444 55544
No 127
>PF04428 Choline_kin_N: Choline kinase N terminus; InterPro: IPR007521 This domain is found N-terminal to choline/ethanolamine kinase regions (IPR002573 from INTERPRO) in some plant and fungal choline kinase enzymes (2.7.1.32 from EC). This region is only found in some members of the choline kinase family, and is therefore unlikely to contribute to catalysis.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor
Probab=97.40 E-value=0.00015 Score=48.87 Aligned_cols=39 Identities=26% Similarity=0.497 Sum_probs=36.1
Q ss_pred ceeeccccccccCCCCCCc-chHHHHHHHHHh-cCCCCCCC
Q 016788 22 STEFLSSPLIVDTSLSLPL-MTPRVIALCKDL-FKQWSKLD 60 (382)
Q Consensus 22 ~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~~~-~~~W~~~~ 60 (382)
.+.||+++++||++.|... |++.++.++.++ +++|++++
T Consensus 8 d~~vP~v~a~LDnS~p~~y~fk~di~~l~htL~i~~W~~v~ 48 (53)
T PF04428_consen 8 DIEVPSVDAVLDNSLPLDYRFKQDILRLIHTLKIKKWRRVP 48 (53)
T ss_pred ccccCceeeeccCCCchhhccHHHHHHHHHHhcccccccCc
Confidence 5889999999999999998 999999999999 79999754
No 128
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.40 E-value=0.001 Score=61.04 Aligned_cols=143 Identities=15% Similarity=0.195 Sum_probs=80.6
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeC--C----c----eE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFG--N----G----MV 135 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~--~----g----~i 135 (382)
++.+..|....+|++..... ...+++|+........-+..+|..+++.+..+.-.+++++.+. . + +|
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv 87 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKT---GQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLV 87 (275)
T ss_pred eeeecCCCCeEEEEEEECCC---CcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEE
Confidence 45677777778999887533 2478888876543322233567777777765554567776541 1 2 58
Q ss_pred EEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHH
Q 016788 136 QSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEI 215 (382)
Q Consensus 136 ~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (382)
++|++|.++.. .+.+..... .+-....+..+ ..++.+.+
T Consensus 88 ~e~~~~~~L~~--------------~~~~~~~~~-----~~~~~~~~~~~----------------------~~ql~~al 126 (275)
T cd06608 88 MELCGGGSVTD--------------LVKGLRKKG-----KRLKEEWIAYI----------------------LRETLRGL 126 (275)
T ss_pred EEcCCCCcHHH--------------HHHHHhhcC-----CCCCHHHHHHH----------------------HHHHHHHH
Confidence 89998865421 111111000 00001111111 11122222
Q ss_pred HHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 216 VELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 216 ~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
..+. ...++|+|++|.||++++ ++.+.++||..+..-
T Consensus 127 ~~lH--------~~~i~H~~l~p~ni~~~~-~~~~~l~d~~~~~~~ 163 (275)
T cd06608 127 AYLH--------ENKVIHRDIKGQNILLTK-NAEVKLVDFGVSAQL 163 (275)
T ss_pred HHHh--------cCCcccCCCCHHHEEEcc-CCeEEECCCccceec
Confidence 2221 236899999999999975 678999999977543
No 129
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=97.40 E-value=0.0016 Score=62.04 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=26.1
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 115 ~~ivHrDikp~NIll~~-~~~~kL~Dfg~~~ 144 (325)
T cd05594 115 KNVVYRDLKLENLMLDK-DGHIKITDFGLCK 144 (325)
T ss_pred CCEEecCCCCCeEEECC-CCCEEEecCCCCe
Confidence 46899999999999975 6789999998764
No 130
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=97.39 E-value=0.00062 Score=65.04 Aligned_cols=30 Identities=17% Similarity=0.253 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||+++. ++.+.|+||..+..
T Consensus 116 ~ivH~Dikp~Nili~~-~~~~kL~DfG~~~~ 145 (329)
T cd05618 116 GIIYRDLKLDNVLLDS-EGHIKLTDYGMCKE 145 (329)
T ss_pred CeeeCCCCHHHEEECC-CCCEEEeeCCcccc
Confidence 6899999999999975 67899999987653
No 131
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.39 E-value=0.00047 Score=65.72 Aligned_cols=29 Identities=21% Similarity=0.473 Sum_probs=25.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.|||++. ++.+.|+||..+.
T Consensus 122 ~i~H~Dlkp~NIll~~-~~~~kL~Dfg~a~ 150 (330)
T cd05601 122 GYVHRDIKPENVLIDR-TGHIKLADFGSAA 150 (330)
T ss_pred CeEcccCchHheEECC-CCCEEeccCCCCe
Confidence 6899999999999975 6789999999774
No 132
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.39 E-value=0.0011 Score=61.85 Aligned_cols=30 Identities=20% Similarity=0.319 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 122 ~iiH~dikp~Nill~~-~~~~kl~Dfg~~~~ 151 (285)
T cd05631 122 RIVYRDLKPENILLDD-RGHIRISDLGLAVQ 151 (285)
T ss_pred CEEeCCCCHHHEEECC-CCCEEEeeCCCcEE
Confidence 6899999999999975 67899999987754
No 133
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.39 E-value=0.0025 Score=58.25 Aligned_cols=139 Identities=16% Similarity=0.195 Sum_probs=79.2
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCCc---eEEEeecCC
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGNG---MVQSFINAR 142 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g---~i~e~i~G~ 142 (382)
+..|..|....+|++...++ ..+.+|..........+..+|..+++.+...++ +++++....+ .+++|++|.
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~----~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~v~e~~~~~ 85 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGH----TKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRL-VRLYAVVTQEPIYIITEYMENG 85 (260)
T ss_pred eeeeccCccceEEeeecCCC----ceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCe-eeEEEEEccCCcEEEEEcCCCC
Confidence 46677788889999987654 378899776543322244678777777754443 3344444332 578888775
Q ss_pred cCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHh
Q 016788 143 TLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELA 222 (382)
Q Consensus 143 ~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 222 (382)
++... + +... .. +..+.....++ .++...+..|.
T Consensus 86 ~L~~~--------------~---~~~~--~~--~~~~~~~~~i~----------------------~~i~~al~~LH--- 119 (260)
T cd05067 86 SLVDF--------------L---KTPE--GI--KLTINKLIDMA----------------------AQIAEGMAFIE--- 119 (260)
T ss_pred CHHHH--------------H---HhcC--CC--CCCHHHHHHHH----------------------HHHHHHHHHHh---
Confidence 44210 1 1100 00 00011111111 11222222221
Q ss_pred cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 223 GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 223 ~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
...++|+|++|.||++++ ++.+.++||..+...
T Consensus 120 -----~~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~~~ 152 (260)
T cd05067 120 -----RKNYIHRDLRAANILVSE-TLCCKIADFGLARLI 152 (260)
T ss_pred -----cCCeecccccHHhEEEcC-CCCEEEccCcceeec
Confidence 235899999999999975 678999999987553
No 134
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=97.37 E-value=0.00055 Score=65.21 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 115 ~ivH~Dlkp~NIll~~-~~~~kL~Dfg~~~~ 144 (323)
T cd05595 115 DVVYRDIKLENLMLDK-DGHIKITDFGLCKE 144 (323)
T ss_pred CeEecCCCHHHEEEcC-CCCEEecccHHhcc
Confidence 6899999999999975 67899999997653
No 135
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.37 E-value=0.0018 Score=58.92 Aligned_cols=137 Identities=19% Similarity=0.218 Sum_probs=74.9
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEe-CCc--eEEEeecCCc
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVF-GNG--MVQSFINART 143 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~-~~g--~i~e~i~G~~ 143 (382)
+.+..|....+|+....+. .+++|+....... ....+|..+++.+...++.+ +++.+ .++ .+++|++|.+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~-----~~~iK~~~~~~~~-~~~~~e~~~l~~~~~~~i~~-~~~~~~~~~~~~v~e~~~~~~ 84 (254)
T cd05083 12 EIIGEGEFGAVLQGEYTGQ-----KVAVKNIKCDVTA-QAFLEETAVMTKLHHKNLVR-LLGVILHNGLYIVMELMSKGN 84 (254)
T ss_pred eeeccCCCCceEecccCCC-----ceEEEeecCcchH-HHHHHHHHHHHhCCCCCcCe-EEEEEcCCCcEEEEECCCCCC
Confidence 4566677778898765443 6888887543211 12245666666665544543 44433 333 5888888765
Q ss_pred CCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhc
Q 016788 144 LTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAG 223 (382)
Q Consensus 144 l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 223 (382)
+... +.. +. ....+ +.....+. .++.+.+..+.
T Consensus 85 L~~~--------------l~~-~~----~~~~~--~~~~~~~~----------------------~qi~~al~~lH---- 117 (254)
T cd05083 85 LVNF--------------LRT-RG----RALVS--VIQLLQFS----------------------LDVAEGMEYLE---- 117 (254)
T ss_pred HHHH--------------HHh-cC----cCCCC--HHHHHHHH----------------------HHHHHHHHHHH----
Confidence 4210 110 00 00001 11111111 11222222222
Q ss_pred ccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 224 HLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 224 ~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
...++|+|++|+||++++ ++.+.|+||+.+....
T Consensus 118 ----~~~~~H~dl~p~nili~~-~~~~kl~Dfg~~~~~~ 151 (254)
T cd05083 118 ----SKKLVHRDLAARNILVSE-DGVAKVSDFGLARVGS 151 (254)
T ss_pred ----hCCeeccccCcceEEEcC-CCcEEECCCccceecc
Confidence 236799999999999975 6789999999876543
No 136
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=97.37 E-value=0.00062 Score=65.96 Aligned_cols=138 Identities=14% Similarity=0.199 Sum_probs=76.2
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~ 136 (382)
.++.|..|....+|++..... ...+.+|+..... ........|..++..+.... .++++..+.++ +|+
T Consensus 5 ~~~~LG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~-iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 5 SLKVIGRGAFGEVRLVQKKDT---GHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLW-VVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred EeEEEEeCCCEEEEEEEECCC---CCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCC-cceEEEEEecCCeEEEEE
Confidence 356777788899999976542 2478889875321 11112244655555553222 24555554322 689
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|..|.. .+.+ .. ..+ ......++ .++...+.
T Consensus 81 E~~~gg~L~~--------------~l~~---~~----~l~--~~~~~~~~----------------------~qi~~aL~ 115 (363)
T cd05628 81 EFLPGGDMMT--------------LLMK---KD----TLT--EEETQFYI----------------------AETVLAID 115 (363)
T ss_pred cCCCCCcHHH--------------HHHh---cC----CCC--HHHHHHHH----------------------HHHHHHHH
Confidence 9998854321 0111 00 001 11111111 11222222
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.|. ...++|+|++|.|||++. ++.+.|+||..|..
T Consensus 116 ~lH--------~~givHrDlKp~NILi~~-~~~vkL~DFGla~~ 150 (363)
T cd05628 116 SIH--------QLGFIHRDIKPDNLLLDS-KGHVKLSDFGLCTG 150 (363)
T ss_pred HHH--------hCCeEecCCCHHHeEECC-CCCEEEeeccCccc
Confidence 222 236899999999999975 67899999998764
No 137
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=97.36 E-value=0.0009 Score=65.15 Aligned_cols=30 Identities=23% Similarity=0.349 Sum_probs=26.4
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||+++ ++.+.|+||..|..
T Consensus 162 ~IvHrDLKp~NILl~~-~~~~kL~DFG~a~~ 191 (370)
T cd05621 162 GLIHRDVKPDNMLLDK-HGHLKLADFGTCMK 191 (370)
T ss_pred CeEecCCCHHHEEECC-CCCEEEEeccccee
Confidence 6899999999999975 68899999998753
No 138
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.35 E-value=0.0011 Score=62.13 Aligned_cols=137 Identities=15% Similarity=0.217 Sum_probs=75.8
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCccc-chHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEee
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVI-NRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSFI 139 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~i-dr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~i 139 (382)
.++.+..|....+|++..... ...+++|.......... ...+|..+++.+...++ +++++.+..+ .|++|+
T Consensus 23 ~~~~lg~g~~g~vy~~~~~~~---~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 23 RYEKIGQGASGTVFTAIDVAT---GQEVAIKQINLQKQPKKELIINEILVMKELKNPNI-VNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred EEEEEecCCCeEEEEEEEcCC---CcEEEEEEEecccCchHHHHHHHHHHHHhcCCCce-eeeeeeEecCceEEEEEEec
Confidence 456777788889998865332 24788887654322111 22456666666644343 3555554322 589999
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
+|..+.. .+. .... + +..+... ...+...+..|.
T Consensus 99 ~~~~L~~--------------~~~---~~~l-----~--~~~~~~i----------------------~~~l~~al~~LH 132 (296)
T cd06655 99 AGGSLTD--------------VVT---ETCM-----D--EAQIAAV----------------------CRECLQALEFLH 132 (296)
T ss_pred CCCcHHH--------------HHH---hcCC-----C--HHHHHHH----------------------HHHHHHHHHHHH
Confidence 8865421 010 0000 0 1111111 111222222222
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
+ ..++|+|++|.||++++ ++.+.++||+.+..
T Consensus 133 ~--------~~i~H~dL~p~Nili~~-~~~~kl~dfg~~~~ 164 (296)
T cd06655 133 A--------NQVIHRDIKSDNVLLGM-DGSVKLTDFGFCAQ 164 (296)
T ss_pred H--------CCcccCCCCHHHEEECC-CCCEEEccCccchh
Confidence 1 25789999999999975 67899999997653
No 139
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.35 E-value=0.0014 Score=59.38 Aligned_cols=138 Identities=16% Similarity=0.219 Sum_probs=76.6
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC---cccchHHHHHHHHHHHhCCCCceEEEEeC--Cc--eEEEe
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD---IVINRQRELQAIKYLSAAGFGAKLLAVFG--NG--MVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~---~~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g--~i~e~ 138 (382)
.+.+..|....+|++..... ...+++|....... ..-...+|.+++..+...++. +++.... +. .+++|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLET---GDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIV-KYIGSIETSDSLYIILEY 80 (254)
T ss_pred eeEEcccCCeEEEEEEEcCC---CcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCcc-EEEEEEEeCCEEEEEEec
Confidence 46777888889999876532 13788998865432 111235666666666544443 4444332 22 58899
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++|.++.. .+.+.+.. + +.....++ .++...+..+
T Consensus 81 ~~~~~L~~--------------~~~~~~~l-------~--~~~~~~~~----------------------~~i~~~l~~l 115 (254)
T cd06627 81 AENGSLRQ--------------IIKKFGPF-------P--ESLVAVYV----------------------YQVLQGLAYL 115 (254)
T ss_pred CCCCcHHH--------------HHHhccCC-------C--HHHHHHHH----------------------HHHHHHHHHH
Confidence 88854421 11111100 1 11111111 1111222222
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
. ...++|+|++|+||++++ ++.+.|.||+.+..-
T Consensus 116 H--------~~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~~~ 149 (254)
T cd06627 116 H--------EQGVIHRDIKAANILTTK-DGVVKLADFGVATKL 149 (254)
T ss_pred h--------hCCcccCCCCHHHEEECC-CCCEEEeccccceec
Confidence 1 225789999999999975 678999999977643
No 140
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.35 E-value=0.0017 Score=61.19 Aligned_cols=77 Identities=17% Similarity=0.206 Sum_probs=44.9
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC-C-cccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEEEeec
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT-D-IVINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQSFIN 140 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~-~-~~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~e~i~ 140 (382)
..|..|....+|++..... +....+.+|...... . ......+|..++..+..+.-.+++++.+.. + +|+||++
T Consensus 13 ~~lg~G~~g~V~~a~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 91 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKD-GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 91 (303)
T ss_pred eeecCCCCceEEEEEEccC-CceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCC
Confidence 5677787889999986432 111233455443321 1 111234677777777555445677776643 2 6899998
Q ss_pred CCcC
Q 016788 141 ARTL 144 (382)
Q Consensus 141 G~~l 144 (382)
|.++
T Consensus 92 ~~~L 95 (303)
T cd05088 92 HGNL 95 (303)
T ss_pred CCcH
Confidence 7644
No 141
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=97.34 E-value=0.0037 Score=59.02 Aligned_cols=141 Identities=18% Similarity=0.211 Sum_probs=78.4
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc----ccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI----VINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~----~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e 137 (382)
.+.+..|..+.+|++...+. ...+++|........ .-....|.++++.+...++ +++++.+..+ .|++
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGT---GKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFL-PTLYASFQTETYLCLVMD 81 (316)
T ss_pred eeeecCCccEEEEEEEEcCC---CcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCc-hhheeeeecCCEEEEEEE
Confidence 35677788889999987642 247888987643211 1112456666666653333 4555554332 5899
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|..|.. .+.+ . +....+ ......++ .++...+..
T Consensus 82 ~~~~~~L~~--------------~~~~---~--~~~~l~--~~~~~~~~----------------------~qi~~~l~~ 118 (316)
T cd05574 82 YCPGGELFR--------------LLQR---Q--PGKCLS--EEVARFYA----------------------AEVLLALEY 118 (316)
T ss_pred ecCCCCHHH--------------HHHh---C--CCCccC--HHHHHHHH----------------------HHHHHHHHH
Confidence 998865421 0110 0 000001 11111111 122222333
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
|. ...++|+|++|.||++++ ++.+.|+||+.+...+
T Consensus 119 lH--------~~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 119 LH--------LLGIVYRDLKPENILLHE-SGHIMLSDFDLSKQSD 154 (316)
T ss_pred HH--------HCCeeccCCChHHeEEcC-CCCEEEeecchhhccc
Confidence 32 135899999999999975 6789999999876543
No 142
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.34 E-value=0.0016 Score=59.90 Aligned_cols=30 Identities=30% Similarity=0.397 Sum_probs=25.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||+.+..
T Consensus 126 ~i~h~dlkp~nili~~-~~~~~l~dfg~~~~ 155 (267)
T cd05066 126 GYVHRDLAARNILVNS-NLVCKVSDFGLSRV 155 (267)
T ss_pred CEeehhhchhcEEECC-CCeEEeCCCCcccc
Confidence 5899999999999975 67899999987753
No 143
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=97.33 E-value=0.002 Score=58.38 Aligned_cols=135 Identities=19% Similarity=0.223 Sum_probs=74.2
Q ss_pred EecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeC--Cc--eEEEeecC
Q 016788 68 TVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFG--NG--MVQSFINA 141 (382)
Q Consensus 68 ~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g--~i~e~i~G 141 (382)
.|..|....+|++...++ ..+++|+....... .....+|..+++.+...++ +++++.+. +. .|+||++|
T Consensus 2 ~ig~g~~g~vy~~~~~~~----~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDK----TPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNI-VKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred ccCCCCCceEEEEEecCC----cEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCc-CeEEEEEecCCccEEEEECCCC
Confidence 345566778999876554 37889987654321 1123467777666644444 34444432 22 68999988
Q ss_pred CcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHH
Q 016788 142 RTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKEL 221 (382)
Q Consensus 142 ~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 221 (382)
.++.. .+. .... ...+..+..++ .++...+..+.
T Consensus 77 ~~L~~--------------~~~---~~~~-----~~~~~~~~~~~----------------------~~i~~~l~~lH-- 110 (250)
T cd05085 77 GDFLS--------------FLR---KKKD-----ELKTKQLVKFA----------------------LDAAAGMAYLE-- 110 (250)
T ss_pred CcHHH--------------HHH---hcCC-----CCCHHHHHHHH----------------------HHHHHHHHHHH--
Confidence 64421 010 0000 00111111111 11122222221
Q ss_pred hcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 222 AGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 222 ~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|+||++++ ++.+.++||..+..
T Consensus 111 ------~~~~~H~dl~p~nili~~-~~~~~l~d~g~~~~ 142 (250)
T cd05085 111 ------SKNCIHRDLAARNCLVGE-NNVLKISDFGMSRQ 142 (250)
T ss_pred ------hCCeeecccChheEEEcC-CCeEEECCCcccee
Confidence 236899999999999975 67899999997754
No 144
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.33 E-value=0.0019 Score=58.70 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=28.6
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
...++|+|++|.||++++ ++.+.++||+.+..-
T Consensus 128 ~~~i~h~dl~p~nili~~-~~~~kl~d~g~~~~~ 160 (265)
T cd08217 128 GNTVLHRDLKPANIFLDA-NNNVKLGDFGLAKIL 160 (265)
T ss_pred cCcceecCCCHHHEEEec-CCCEEEecccccccc
Confidence 568899999999999985 688999999987654
No 145
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.32 E-value=0.0013 Score=66.38 Aligned_cols=30 Identities=30% Similarity=0.385 Sum_probs=26.4
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||+++ ++.+.|+||+.+..
T Consensus 189 ~ivHrDlkp~NIll~~-~~~~kL~DFgla~~ 218 (478)
T PTZ00267 189 KMMHRDLKSANIFLMP-TGIIKLGDFGFSKQ 218 (478)
T ss_pred CEEECCcCHHhEEECC-CCcEEEEeCcCcee
Confidence 6899999999999975 67899999998753
No 146
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.31 E-value=0.00083 Score=65.57 Aligned_cols=137 Identities=16% Similarity=0.184 Sum_probs=76.8
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~ 136 (382)
.+..|..|....||++..... ...+.+|+..... ........|..+++.+.... .+++++.+.++ +|+
T Consensus 5 ~~~~LG~G~~g~Vy~~~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~-iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 5 KIKTLGIGAFGEVCLACKVDT---HALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEW-VVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred EEEEEeecCCEEEEEEEECCC---CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCC-eeeeEEEEecCCEEEEEE
Confidence 467888888999999976543 2478888865321 11112245666666554332 24555554322 589
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|..|.. .+.+.. ..+ ......++ .++...+.
T Consensus 81 E~~~gg~L~~--------------~l~~~~-------~~~--e~~~~~~~----------------------~qi~~aL~ 115 (381)
T cd05626 81 DYIPGGDMMS--------------LLIRME-------VFP--EVLARFYI----------------------AELTLAIE 115 (381)
T ss_pred ecCCCCcHHH--------------HHHhcC-------CCC--HHHHHHHH----------------------HHHHHHHH
Confidence 9998854311 111100 001 01111111 11222222
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.|. ...++|+|++|.|||++. ++.+.|+||..+.
T Consensus 116 ~LH--------~~givHrDlKp~Nili~~-~~~~kL~DFGl~~ 149 (381)
T cd05626 116 SVH--------KMGFIHRDIKPDNILIDL-DGHIKLTDFGLCT 149 (381)
T ss_pred HHH--------hCCeeecCCcHHHEEECC-CCCEEEeeCcCCc
Confidence 222 236899999999999975 6789999999764
No 147
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=97.31 E-value=0.00086 Score=65.42 Aligned_cols=137 Identities=15% Similarity=0.222 Sum_probs=76.8
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~ 136 (382)
.++.|..|....||++..... ...+.+|+..... .......+|..+++.+....+ ++++..+.+ . +|+
T Consensus 5 ~~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~i-v~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 5 KIKTLGIGAFGEVCLARKVDT---KALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWV-VRLYYSFQDKDNLYFVM 80 (382)
T ss_pred EEEEEEeCCCEEEEEEEECCC---CCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcC-CeEEEEEEeCCEEEEEE
Confidence 467888888899999976543 2367888764321 111123456666666543333 455555432 2 589
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|..|.. .+.+ ... .+ ...+..++ .++...+.
T Consensus 81 E~~~gg~L~~--------------~l~~---~~~----~~--e~~~~~~~----------------------~qi~~al~ 115 (382)
T cd05625 81 DYIPGGDMMS--------------LLIR---MGI----FP--EDLARFYI----------------------AELTCAVE 115 (382)
T ss_pred eCCCCCcHHH--------------HHHh---cCC----CC--HHHHHHHH----------------------HHHHHHHH
Confidence 9998854321 1111 000 01 01111111 11222222
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.+. ...++|+|++|.|||++. ++.+.|+||..|.
T Consensus 116 ~lH--------~~~ivHrDlKp~NILl~~-~g~~kL~DFGla~ 149 (382)
T cd05625 116 SVH--------KMGFIHRDIKPDNILIDR-DGHIKLTDFGLCT 149 (382)
T ss_pred HHH--------hCCeecCCCCHHHEEECC-CCCEEEeECCCCc
Confidence 222 125899999999999975 6889999999764
No 148
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.31 E-value=0.00049 Score=66.01 Aligned_cols=138 Identities=15% Similarity=0.225 Sum_probs=76.1
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~ 136 (382)
.+..|..|....+|++..... +..+++|+..... ........|..++..+....+ ++++..+.+ . +|+
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 5 VIKVIGRGAFGEVWLVRDKDT---GQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWI-VKLYYSFQDEEHLYLVM 80 (350)
T ss_pred EEEEEEeCCcEEEEEEEECCC---CCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCc-cchhhheecCCeEEEEE
Confidence 346777788889999987632 2478889875321 111122456666655543333 344444322 2 689
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|.+|.. .+.+-+. .+ ......++ .++...+.
T Consensus 81 e~~~~~~L~~--------------~l~~~~~-------l~--~~~~~~i~----------------------~qi~~aL~ 115 (350)
T cd05573 81 EYMPGGDLMN--------------LLIRKDV-------FP--EETARFYI----------------------AELVLALD 115 (350)
T ss_pred cCCCCCCHHH--------------HHHHcCC-------CC--HHHHHHHH----------------------HHHHHHHH
Confidence 9998754421 1111000 01 01111111 12222233
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.|.+ ..++|+|++|.|||++. ++.+.|+||..+..
T Consensus 116 ~LH~--------~giiH~Dlkp~NIll~~-~~~~kL~Dfg~~~~ 150 (350)
T cd05573 116 SVHK--------LGFIHRDIKPDNILIDA-DGHIKLADFGLCKK 150 (350)
T ss_pred HHHH--------CCeeccCCCHHHeEECC-CCCEEeecCCCCcc
Confidence 3322 47899999999999975 67899999998754
No 149
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.31 E-value=0.0035 Score=57.27 Aligned_cols=138 Identities=19% Similarity=0.258 Sum_probs=76.9
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCC--c--eEEEeecC
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGN--G--MVQSFINA 141 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~--g--~i~e~i~G 141 (382)
++.+..|..+.+|+....++ ..+++|.........-...+|..+++.+...++. ++++.... . ++++|++|
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~----~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05072 11 VKKLGAGQFGEVWMGYYNNS----TKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLV-RLYAVVTKEEPIYIITEYMAK 85 (261)
T ss_pred eeecCCcCCceEEEEEecCC----ceEEEEEccCCchhHHHHHHHHHHHHhCCCCCee-eEEEEEcCCCCcEEEEecCCC
Confidence 46777788889999876544 3688887654322111234677777766544443 34444322 2 68899987
Q ss_pred CcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHH
Q 016788 142 RTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKEL 221 (382)
Q Consensus 142 ~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 221 (382)
.++.. .+. ... .. ...+.....+. ..+...+..|.+
T Consensus 86 ~~L~~--------------~l~---~~~--~~--~~~~~~~~~~~----------------------~~l~~~l~~LH~- 121 (261)
T cd05072 86 GSLLD--------------FLK---SDE--GG--KVLLPKLIDFS----------------------AQIAEGMAYIER- 121 (261)
T ss_pred CcHHH--------------HHH---Hhc--CC--CCCHHHHHHHH----------------------HHHHHHHHHHHH-
Confidence 54421 011 100 00 00111111111 112222333321
Q ss_pred hcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 222 AGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 222 ~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.||++++ ++.+.++||+.+..
T Consensus 122 -------~~i~H~dl~p~nili~~-~~~~~l~dfg~~~~ 152 (261)
T cd05072 122 -------KNYIHRDLRAANVLVSE-SLMCKIADFGLARV 152 (261)
T ss_pred -------CCeeccccchhhEEecC-CCcEEECCCcccee
Confidence 25799999999999975 67899999998764
No 150
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=97.30 E-value=0.0021 Score=60.57 Aligned_cols=75 Identities=15% Similarity=0.207 Sum_probs=44.4
Q ss_pred CeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEE
Q 016788 63 RFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQ 136 (382)
Q Consensus 63 ~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~ 136 (382)
...+..|..|....+|++..... ...+++|....... ......+|..+++.+...++ .+++..+. ++ +|+
T Consensus 8 y~~~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 8 YIKLEKLGEGTYATVFKGRSKLT---ENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-VTLHDIVHTDKSLTLVF 83 (309)
T ss_pred eEEEEEecccCCEEEEEEEecCC---CCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCc-ceEEEEEeeCCeEEEEE
Confidence 34567788888889999876533 13677887643221 11233567777777654444 34554432 22 588
Q ss_pred EeecC
Q 016788 137 SFINA 141 (382)
Q Consensus 137 e~i~G 141 (382)
||+++
T Consensus 84 e~~~~ 88 (309)
T cd07872 84 EYLDK 88 (309)
T ss_pred eCCCC
Confidence 88865
No 151
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=97.30 E-value=0.00078 Score=63.96 Aligned_cols=29 Identities=21% Similarity=0.303 Sum_probs=25.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.|+||..+.
T Consensus 116 ~ivHrdikp~Nil~~~-~~~~kl~Dfg~~~ 144 (316)
T cd05619 116 GIVYRDLKLDNILLDT-DGHIKIADFGMCK 144 (316)
T ss_pred CeEeCCCCHHHEEECC-CCCEEEccCCcce
Confidence 6899999999999975 6789999998765
No 152
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=97.29 E-value=0.0015 Score=63.51 Aligned_cols=136 Identities=17% Similarity=0.239 Sum_probs=75.3
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~ 136 (382)
.+..|..|....+|++..... ...+++|+..... ...-....|..+++.+....+ +++++.+.++ +|+
T Consensus 47 ~~~~lg~G~~g~Vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~i-v~~~~~~~~~~~~~lv~ 122 (370)
T cd05596 47 VIKVIGRGAFGEVQLVRHKSS---KQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWI-VQLHYAFQDDKYLYMVM 122 (370)
T ss_pred EEEEEeeCCCEEEEEEEECCC---CCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCc-ceEEEEEecCCEEEEEE
Confidence 345677788889999877543 2478888864311 011112356666665543333 4455544322 689
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|..|.. .+ +.... +..| ...+. .++...+.
T Consensus 123 Ey~~gg~L~~--------------~l---~~~~l-----~~~~--~~~~~----------------------~qi~~aL~ 156 (370)
T cd05596 123 EYMPGGDLVN--------------LM---SNYDI-----PEKW--ARFYT----------------------AEVVLALD 156 (370)
T ss_pred cCCCCCcHHH--------------HH---HhcCC-----CHHH--HHHHH----------------------HHHHHHHH
Confidence 9998865421 01 11111 1101 01111 11222233
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.|.+ ..++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 157 ~LH~--------~~ivHrDLkp~NILl~~-~~~~kL~DfG~~~ 190 (370)
T cd05596 157 AIHS--------MGFIHRDVKPDNMLLDK-SGHLKLADFGTCM 190 (370)
T ss_pred HHHH--------CCeeccCCCHHHEEEcC-CCCEEEEecccee
Confidence 3321 25899999999999975 6889999998764
No 153
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.29 E-value=0.0013 Score=60.91 Aligned_cols=29 Identities=28% Similarity=0.478 Sum_probs=25.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||+++. ++.+.|+||..+.
T Consensus 115 ~i~H~dlkp~Nill~~-~~~~~l~dfg~~~ 143 (279)
T cd06619 115 KILHRDVKPSNMLVNT-RGQVKLCDFGVST 143 (279)
T ss_pred CEeeCCCCHHHEEECC-CCCEEEeeCCcce
Confidence 6899999999999975 6889999999775
No 154
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.28 E-value=0.0014 Score=60.53 Aligned_cols=77 Identities=13% Similarity=0.133 Sum_probs=45.3
Q ss_pred EEecceeeeeEEEEEecCCC--CCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCC----ceEEEe
Q 016788 67 DTVSGGITNLLLKVTVKEES--GNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGN----GMVQSF 138 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~--~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~----g~i~e~ 138 (382)
..+..|....+|++...+.. .....+.+|+....... .-+..+|..+++.+...++ .++++.+.. .++++|
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~ 89 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENI-VKFYGVCTEGDPPIMVFEY 89 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCc-hheeeEEecCCCeEEEEec
Confidence 45566667788988764321 12246888887654321 1233567777777654443 345544432 268999
Q ss_pred ecCCcC
Q 016788 139 INARTL 144 (382)
Q Consensus 139 i~G~~l 144 (382)
++|.+|
T Consensus 90 ~~~~~L 95 (280)
T cd05049 90 MEHGDL 95 (280)
T ss_pred CCCCCH
Confidence 998765
No 155
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.28 E-value=0.0019 Score=60.12 Aligned_cols=142 Identities=15% Similarity=0.231 Sum_probs=78.8
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEe--C-Cc---eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVF--G-NG---MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~--~-~g---~i~ 136 (382)
.++.++.|..-.+|++..... ...+++|+...... ......+|.++++.+...++ .++++.+ . .+ +|+
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 5 ELSRLGEGAGGSVTKCRLKNT---GMIFALKTITTDPNPDLQKQILRELEINKSCKSPYI-VKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred EEEEeccCCceEEEEEEECCC---CeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCe-eeeeeEEEccCCCeEEEEE
Confidence 456777888888999987543 24788888764322 11223567777766654444 3444433 2 22 589
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|..|.. + +.++.... ...+ ...+..+ ...+...+.
T Consensus 81 e~~~~~~L~~-------~-------l~~~~~~~---~~l~--~~~~~~i----------------------~~~i~~~L~ 119 (287)
T cd06621 81 EYCEGGSLDS-------I-------YKKVKKRG---GRIG--EKVLGKI----------------------AESVLKGLS 119 (287)
T ss_pred EecCCCCHHH-------H-------HHHHHhcC---CCCC--HHHHHHH----------------------HHHHHHHHH
Confidence 9998875521 1 11111100 0000 0000011 112222232
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.+. ...++|+|+++.||++++ ++.+.++||..+..
T Consensus 120 ~lH--------~~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~~ 154 (287)
T cd06621 120 YLH--------SRKIIHRDIKPSNILLTR-KGQVKLCDFGVSGE 154 (287)
T ss_pred HHH--------HCCcccCCCCHHHEEEec-CCeEEEeecccccc
Confidence 222 236899999999999975 67899999998754
No 156
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.28 E-value=0.0032 Score=60.20 Aligned_cols=75 Identities=17% Similarity=0.293 Sum_probs=44.1
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEe-CCc---eEEEee
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVF-GNG---MVQSFI 139 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~-~~g---~i~e~i 139 (382)
++.|..|....+|++..... ...+.+|+...... ......+|.++++.+...++ +++++.+ .++ +|++|+
T Consensus 10 ~~~lg~g~~g~V~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~ 85 (333)
T cd06650 10 ISELGAGNGGVVFKVSHKPS---GLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-VGFYGAFYSDGEISICMEHM 85 (333)
T ss_pred eccccCCCCEEEEEEEECCC---CcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcc-cceeEEEEECCEEEEEEecC
Confidence 45677777789999877533 13566776543211 11123567777777754444 3455443 233 689999
Q ss_pred cCCcC
Q 016788 140 NARTL 144 (382)
Q Consensus 140 ~G~~l 144 (382)
+|..|
T Consensus 86 ~~~~L 90 (333)
T cd06650 86 DGGSL 90 (333)
T ss_pred CCCcH
Confidence 88655
No 157
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=97.28 E-value=0.00092 Score=62.11 Aligned_cols=29 Identities=14% Similarity=0.285 Sum_probs=25.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 117 ~i~H~dlkp~Nili~~-~~~~~l~dfg~~~ 145 (280)
T cd05608 117 RIIYRDLKPENVLLDN-DGNVRISDLGLAV 145 (280)
T ss_pred CcccCCCCHHHEEECC-CCCEEEeeCccce
Confidence 6899999999999975 6789999998764
No 158
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=97.27 E-value=0.0012 Score=61.16 Aligned_cols=29 Identities=24% Similarity=0.433 Sum_probs=25.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|+||++++ ++.+.++||..+.
T Consensus 121 ~ivH~dl~p~Nil~~~-~~~~~l~dfg~~~ 149 (277)
T cd06640 121 KKIHRDIKAANVLLSE-QGDVKLADFGVAG 149 (277)
T ss_pred CccCcCCChhhEEEcC-CCCEEEcccccce
Confidence 6789999999999975 6789999998774
No 159
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=97.27 E-value=0.0019 Score=60.74 Aligned_cols=73 Identities=15% Similarity=0.202 Sum_probs=44.6
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeCC--c--eEEEe
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFGN--G--MVQSF 138 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~~--g--~i~e~ 138 (382)
.++.|..|....+|++..... ...+++|+...... ......+|..+++.+...++ .+++..+.+ . +|+||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 9 KLEKLGEGSYATVYKGKSKVN---GKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANI-VLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred EeeeEEecCCEEEEEEEECCC---CCEEEEEEeccccccccchhHHHHHHHHhhCCCCCc-CeEEEEEecCCeEEEEEEC
Confidence 457778888889999987532 23788888753321 11233567777777754444 344444432 2 58898
Q ss_pred ecC
Q 016788 139 INA 141 (382)
Q Consensus 139 i~G 141 (382)
++|
T Consensus 85 ~~~ 87 (303)
T cd07869 85 VHT 87 (303)
T ss_pred CCc
Confidence 876
No 160
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=97.27 E-value=0.00093 Score=63.81 Aligned_cols=138 Identities=14% Similarity=0.183 Sum_probs=77.3
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~ 136 (382)
-.+.|..|....+|++..... ...+.+|+..... ...-...+|..+++.+...++ .+++..+. ++ .|+
T Consensus 22 ~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 22 MGETLGTGSFGRVRIAKHKGT---GEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFI-VNMMCSFQDENRVYFLL 97 (329)
T ss_pred EEEEEEecCCeEEEEEEECCC---CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC-CcEEEEEEcCCEEEEEE
Confidence 346677788889999987543 2478888875321 111123467777766643333 45555543 22 588
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|..|.. .+.+ .. ..+ ......+. .++...+.
T Consensus 98 e~~~~~~L~~--------------~l~~---~~----~~~--~~~~~~~~----------------------~qi~~aL~ 132 (329)
T PTZ00263 98 EFVVGGELFT--------------HLRK---AG----RFP--NDVAKFYH----------------------AELVLAFE 132 (329)
T ss_pred cCCCCChHHH--------------HHHH---cC----CCC--HHHHHHHH----------------------HHHHHHHH
Confidence 9998864421 1111 00 001 01111111 12222233
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.|.+ ..++|+|++|.|||++. ++.+.|+||..+..
T Consensus 133 ~LH~--------~~ivH~dlkp~NIll~~-~~~~kl~Dfg~~~~ 167 (329)
T PTZ00263 133 YLHS--------KDIIYRDLKPENLLLDN-KGHVKVTDFGFAKK 167 (329)
T ss_pred HHHH--------CCeeecCCCHHHEEECC-CCCEEEeeccCceE
Confidence 3322 35899999999999975 67899999997753
No 161
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.26 E-value=0.0044 Score=59.18 Aligned_cols=137 Identities=14% Similarity=0.203 Sum_probs=74.3
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC---Cc-ccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT---DI-VINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~---~~-~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e 137 (382)
++.|..|....+|++..... ...+.+|+..... .. .-....|..++..+....+ +++++.+. ++ +|+|
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNT---GQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWI-TNLHYAFQDENNLYLVMD 81 (331)
T ss_pred EEEEEecCCeEEEEEEECCC---CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC-CceEEEEecCCeEEEEEe
Confidence 56777888889999887543 2478889865311 00 0012345555554433333 45555543 22 6899
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|..|.. .+.+.+. . .+ ...+..++ .++...+..
T Consensus 82 ~~~g~~L~~--------------~l~~~~~-~-----~~--~~~~~~~~----------------------~qi~~~l~~ 117 (331)
T cd05597 82 YYVGGDLLT--------------LLSKFED-R-----LP--EDMARFYL----------------------AEMVLAIDS 117 (331)
T ss_pred cCCCCcHHH--------------HHHHhcC-C-----CC--HHHHHHHH----------------------HHHHHHHHH
Confidence 998865421 1111110 0 01 01111111 112222222
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
+. ...++|+|++|.|||++. ++.+.|+||..+.
T Consensus 118 lH--------~~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~ 150 (331)
T cd05597 118 VH--------QLGYVHRDIKPDNVLLDK-NGHIRLADFGSCL 150 (331)
T ss_pred HH--------hCCeEECCCCHHHEEECC-CCCEEEEECCcee
Confidence 22 135899999999999975 6789999998763
No 162
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.26 E-value=0.0015 Score=60.63 Aligned_cols=137 Identities=20% Similarity=0.331 Sum_probs=75.7
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--c-ccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEe
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--I-VINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~-~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~ 138 (382)
++.|..|....+|++..... ...+.+|+...... . .-...+|..+++.+...++. +++..+. ++ +|+||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKET---KEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIV-ELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred EEEecccCCEEEEEEEECCC---CcEEEEEEEecccccccchhhHHHHHHHHHhCCCcccc-chhhhEecCCEEEEEEec
Confidence 45677788889999987543 24688887754321 1 11234677777776554443 2333332 22 68999
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++|..+. . + +... .. .+ ...+..++ .++...+..|
T Consensus 82 ~~~~~l~-----------~----~---~~~~--~~-~~--~~~~~~~~----------------------~qi~~~L~~l 116 (287)
T cd07848 82 VEKNMLE-----------L----L---EEMP--NG-VP--PEKVRSYI----------------------YQLIKAIHWC 116 (287)
T ss_pred CCCCHHH-----------H----H---HhcC--CC-CC--HHHHHHHH----------------------HHHHHHHHHH
Confidence 8874321 0 0 1100 00 01 11111111 1122223333
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
. ...++|+|++|.||+++. ++.+.|+||..+..
T Consensus 117 H--------~~~i~H~dlkp~Nill~~-~~~~kl~Dfg~~~~ 149 (287)
T cd07848 117 H--------KNDIVHRDIKPENLLISH-NDVLKLCDFGFARN 149 (287)
T ss_pred H--------HCCeecCCCCHHHEEEcC-CCcEEEeeccCccc
Confidence 2 125899999999999975 67899999998764
No 163
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.25 E-value=0.0043 Score=56.55 Aligned_cols=136 Identities=19% Similarity=0.217 Sum_probs=75.3
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEE-e-CCc---eEEEeec
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAV-F-GNG---MVQSFIN 140 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~-~-~~g---~i~e~i~ 140 (382)
.+.+..|....+|++...+. .+++|....... .-+..+|..+++.+...++. ++++. . .++ .++||++
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~-----~~~~k~~~~~~~-~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 11 LQTIGKGEFGDVMLGDYRGN-----KVAVKCIKNDAT-AQAFLAEASVMTQLRHSNLV-QLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred eeeecccCCCeEEEEEEcCC-----cEEEEEeCCCch-HHHHHHHHHHHHhCCCCCee-eEEEEEEcCCCceEEEEECCC
Confidence 35666677778999877644 688888754321 11234677777776544443 33332 2 222 5889998
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|.++... + +.... . ...+.....+. .++...+..+.
T Consensus 84 ~~~L~~~--------------~---~~~~~--~--~~~~~~~~~~~----------------------~~i~~~l~~lH- 119 (256)
T cd05082 84 KGSLVDY--------------L---RSRGR--S--VLGGDCLLKFS----------------------LDVCEAMEYLE- 119 (256)
T ss_pred CCcHHHH--------------H---HhcCC--C--CCCHHHHHHHH----------------------HHHHHHHHHHH-
Confidence 8654210 1 11000 0 00111111111 11222222221
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||++++ ++.+.++||+.+..
T Consensus 120 -------~~~i~H~dlkp~nil~~~-~~~~kl~dfg~~~~ 151 (256)
T cd05082 120 -------ANNFVHRDLAARNVLVSE-DNVAKVSDFGLTKE 151 (256)
T ss_pred -------hCCEeccccchheEEEcC-CCcEEecCCcccee
Confidence 235899999999999975 67899999997754
No 164
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.25 E-value=0.002 Score=58.85 Aligned_cols=30 Identities=23% Similarity=0.356 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 124 ~i~H~dl~p~nilv~~-~~~~~l~dfg~~~~ 153 (263)
T cd06625 124 MIVHRDIKGANILRDS-AGNVKLGDFGASKR 153 (263)
T ss_pred CeecCCCCHHHEEEcC-CCCEEEeeccccee
Confidence 5799999999999975 67899999997753
No 165
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=97.24 E-value=0.0014 Score=62.86 Aligned_cols=138 Identities=19% Similarity=0.294 Sum_probs=82.5
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccch------HHHHHHHHHHHhCCCCceEEEEeCC----ceE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINR------QRELQAIKYLSAAGFGAKLLAVFGN----GMV 135 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr------~~E~~~l~~l~~~gl~P~~~~~~~~----g~i 135 (382)
++.|..|-...||++...+.. .-+-+|+-.+.. ++.| +.|.+||+.+ ++-+-|.+|+.++. +++
T Consensus 82 lk~LG~GdiG~VyL~~l~~t~---~~fAmKVmdK~~--l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 82 LKRLGCGDIGTVYLVELRGTN---CLFAMKVMDKES--LASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHcCCCCceeEEEEEecCCC---ceEEEEEecHHH--HhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeEEE
Confidence 356788999999999987642 356788865432 2222 4455555443 23455999998853 379
Q ss_pred EEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHH
Q 016788 136 QSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEI 215 (382)
Q Consensus 136 ~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (382)
+||.+|..|... .|. .|...-+ +...+|+ ..++.-.+
T Consensus 156 meyCpGGdL~~L-----------------rqk--Qp~~~fs---e~~aRFY---------------------aAEvl~AL 192 (459)
T KOG0610|consen 156 MEYCPGGDLHSL-----------------RQK--QPGKRFS---ESAARFY---------------------AAEVLLAL 192 (459)
T ss_pred EecCCCccHHHH-----------------Hhh--CCCCccc---hhhHHHH---------------------HHHHHHHH
Confidence 999999754321 011 1111000 0001111 11122223
Q ss_pred HHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 216 VELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 216 ~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
+.|. -++++=+||+|.|||+.+ +|-+.|.|||.+.-.
T Consensus 193 EYLH--------mlGivYRDLKPENILvre-dGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 193 EYLH--------MLGIVYRDLKPENILVRE-DGHIMLSDFDLSLRC 229 (459)
T ss_pred HHHH--------hhceeeccCCcceeEEec-CCcEEeeeccccccC
Confidence 3331 248889999999999986 688999999988664
No 166
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=97.24 E-value=0.0026 Score=59.26 Aligned_cols=137 Identities=15% Similarity=0.197 Sum_probs=76.8
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e 137 (382)
+..|..|....+|++..... ...+++|+..... .......+|..+++.+...+ .++++..+.++ .|+|
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGS---GKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPF-LVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred EEEeecCCCeEEEEEEEcCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCC-ccceeeEEEcCCeEEEEEe
Confidence 45666777789998877542 2478888764321 11112245666666665322 34566655332 5899
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|..+.. .+.+-.. .+ ...+..+. .++.+.+..
T Consensus 82 ~~~~~~L~~--------------~~~~~~~-------l~--~~~~~~~~----------------------~qil~~l~~ 116 (290)
T cd05580 82 YVPGGELFS--------------HLRKSGR-------FP--EPVARFYA----------------------AQVVLALEY 116 (290)
T ss_pred cCCCCCHHH--------------HHHHcCC-------CC--HHHHHHHH----------------------HHHHHHHHH
Confidence 998764421 1111000 01 11111111 122223333
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
+.+ ..++|+|++|.||++++ ++.+.|+||+.+..
T Consensus 117 lH~--------~~i~H~dl~p~nili~~-~~~~kl~dfg~~~~ 150 (290)
T cd05580 117 LHS--------LDIVYRDLKPENLLLDS-DGYIKITDFGFAKR 150 (290)
T ss_pred HHH--------CCEecCCCCHHHEEECC-CCCEEEeeCCCccc
Confidence 321 36899999999999975 67899999998765
No 167
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.24 E-value=0.0037 Score=57.67 Aligned_cols=142 Identities=14% Similarity=0.170 Sum_probs=79.2
Q ss_pred EEecceeeeeEEEEEecCC-CCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCC------ceEEE
Q 016788 67 DTVSGGITNLLLKVTVKEE-SGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGN------GMVQS 137 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~-~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~------g~i~e 137 (382)
+.++.|..+.+|++..... .+....+++|+....... ..+..+|...++.+...++ +++++.+.. ..+++
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i-~~~~~~~~~~~~~~~~lv~e 88 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI-VKYKGVCEKPGGRSLRLIME 88 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCCh-heEEeeeecCCCCceEEEEe
Confidence 5677777889999976432 122347889987654332 2233566666665543333 455554421 26889
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|.++..- . +.... .-.+..+..+. ..+...+..
T Consensus 89 ~~~~~~l~~~-------l----------~~~~~-----~~~~~~~~~~~----------------------~~l~~aL~~ 124 (284)
T cd05038 89 YLPSGSLRDY-------L----------QRHRD-----QINLKRLLLFS----------------------SQICKGMDY 124 (284)
T ss_pred cCCCCCHHHH-------H----------HhCcc-----ccCHHHHHHHH----------------------HHHHHHHHH
Confidence 9987655310 0 11000 00011111111 122222322
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
|. ...++|+|++|.||+++. ++.+.+.||+.+..-.
T Consensus 125 lH--------~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 125 LG--------SQRYIHRDLAARNILVES-EDLVKISDFGLAKVLP 160 (284)
T ss_pred HH--------hCCeecCCCCHHhEEEcC-CCCEEEcccccccccc
Confidence 32 136899999999999975 6889999999887644
No 168
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.24 E-value=0.0028 Score=59.03 Aligned_cols=73 Identities=15% Similarity=0.198 Sum_probs=44.1
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEe
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSF 138 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~ 138 (382)
.++.|..|....+|++..... ...+++|+....... .....+|..+++.+...++ +++++.+..+ .|++|
T Consensus 9 ~~~~ig~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 9 NLEKLGEGSYATVYKGISRIN---GQLVALKVISMKTEEGVPFTAIREASLLKGLKHANI-VLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred EEEEEEecCCEEEEEEEEcCC---CcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCE-eEEEEEEecCCeEEEEEec
Confidence 456777888889999876432 137889887543221 1233567777777654443 3555544322 47888
Q ss_pred ecC
Q 016788 139 INA 141 (382)
Q Consensus 139 i~G 141 (382)
+++
T Consensus 85 ~~~ 87 (291)
T cd07870 85 MHT 87 (291)
T ss_pred ccC
Confidence 765
No 169
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=97.24 E-value=0.0013 Score=63.95 Aligned_cols=137 Identities=17% Similarity=0.249 Sum_probs=75.5
Q ss_pred eEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eE
Q 016788 64 FSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MV 135 (382)
Q Consensus 64 ~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i 135 (382)
..+..|..|....+|++...... ..+.+|+..... ...-....|..+++.+....+ +++++.+.++ +|
T Consensus 46 ~i~~~lG~G~fg~Vy~~~~~~~~---~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-v~~~~~~~~~~~~~lv 121 (371)
T cd05622 46 EVVKVIGRGAFGEVQLVRHKSTR---KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-VQLFYAFQDDRYLYMV 121 (371)
T ss_pred EEEEEEeecCCeEEEEEEECCCC---cEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-CeEEEEEEcCCEEEEE
Confidence 34567777888899999876432 467888764311 000112345555555433333 4555554322 58
Q ss_pred EEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHH
Q 016788 136 QSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEI 215 (382)
Q Consensus 136 ~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (382)
+||++|..|.. .+.. ... +..+ ...+. .++...+
T Consensus 122 ~Ey~~gg~L~~--------------~~~~---~~~-----~~~~--~~~~~----------------------~qi~~aL 155 (371)
T cd05622 122 MEYMPGGDLVN--------------LMSN---YDV-----PEKW--ARFYT----------------------AEVVLAL 155 (371)
T ss_pred EcCCCCCcHHH--------------HHHh---cCC-----CHHH--HHHHH----------------------HHHHHHH
Confidence 99998865421 1111 011 1000 00111 1222223
Q ss_pred HHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 216 VELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 216 ~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..|. ...++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 156 ~~LH--------~~~ivHrDLkp~NIll~~-~~~ikL~DfG~a~ 190 (371)
T cd05622 156 DAIH--------SMGFIHRDVKPDNMLLDK-SGHLKLADFGTCM 190 (371)
T ss_pred HHHH--------HCCEEeCCCCHHHEEECC-CCCEEEEeCCcee
Confidence 3332 236899999999999975 6789999998764
No 170
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=97.23 E-value=0.0024 Score=59.56 Aligned_cols=74 Identities=16% Similarity=0.233 Sum_probs=44.6
Q ss_pred eEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEE
Q 016788 64 FSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQS 137 (382)
Q Consensus 64 ~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e 137 (382)
..+..|..|....+|++..... ...+.+|+...... ......+|..+++.+...++ .++++.+... .|+|
T Consensus 8 ~~~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 8 VKLDKLGEGTYATVFKGRSKLT---ENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANI-VTLHDIIHTERCLTLVFE 83 (288)
T ss_pred eEeeEEecCCCEEEEEEEECCC---CCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCE-eeEEEEEcCCCeEEEEEe
Confidence 3467788888889999876543 24688887643211 11123468777777754333 3455554322 5888
Q ss_pred eecC
Q 016788 138 FINA 141 (382)
Q Consensus 138 ~i~G 141 (382)
|++|
T Consensus 84 ~~~~ 87 (288)
T cd07871 84 YLDS 87 (288)
T ss_pred CCCc
Confidence 8876
No 171
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=97.23 E-value=0.001 Score=63.31 Aligned_cols=30 Identities=20% Similarity=0.261 Sum_probs=26.2
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||++. ++.+.|+||..+..
T Consensus 115 ~ivHrDlkp~NIll~~-~~~~kl~DfG~a~~ 144 (323)
T cd05571 115 DVVYRDLKLENLMLDK-DGHIKITDFGLCKE 144 (323)
T ss_pred CeEeCCCCHHHEEECC-CCCEEEeeCCCCcc
Confidence 6899999999999975 67899999997753
No 172
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=97.23 E-value=0.0014 Score=59.75 Aligned_cols=140 Identities=17% Similarity=0.222 Sum_probs=76.2
Q ss_pred EecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC-c-ccchHHHHHHHHHHHhCCCCceEEEEeCCc---eEEEeecCC
Q 016788 68 TVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD-I-VINRQRELQAIKYLSAAGFGAKLLAVFGNG---MVQSFINAR 142 (382)
Q Consensus 68 ~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~-~-~idr~~E~~~l~~l~~~gl~P~~~~~~~~g---~i~e~i~G~ 142 (382)
.|+.|..+.+|++......+....+.+|....... . .-+...|...+..+...++ .++++.+... .++||.+|.
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENL-IRLYGVVLTHPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCc-cceeEEEcCCeEEEEEEecCCC
Confidence 35667778999998654322223578888766432 1 1123456666666654443 3444433222 588888876
Q ss_pred cCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHh
Q 016788 143 TLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELA 222 (382)
Q Consensus 143 ~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 222 (382)
++... +. .... .+-.+..+..+. .++.+.+..+.
T Consensus 81 ~L~~~--------------l~---~~~~----~~~~~~~~~~~~----------------------~qi~~~L~~lH--- 114 (257)
T cd05040 81 SLLDR--------------LR---KDAL----GHFLISTLCDYA----------------------VQIANGMRYLE--- 114 (257)
T ss_pred cHHHH--------------HH---hccc----ccCcHHHHHHHH----------------------HHHHHHHHHHH---
Confidence 54211 11 1000 010111111111 11222222222
Q ss_pred cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 223 GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 223 ~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||++++ ++.+.++||.++..
T Consensus 115 -----~~~i~H~di~p~nil~~~-~~~~kl~dfg~~~~ 146 (257)
T cd05040 115 -----SKRFIHRDLAARNILLAS-DDKVKIGDFGLMRA 146 (257)
T ss_pred -----hCCccccccCcccEEEec-CCEEEecccccccc
Confidence 136799999999999985 57899999997754
No 173
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.23 E-value=0.0017 Score=59.93 Aligned_cols=136 Identities=17% Similarity=0.243 Sum_probs=76.2
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCC--CceEEEEeCCc----eEEEe
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGF--GAKLLAVFGNG----MVQSF 138 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl--~P~~~~~~~~g----~i~e~ 138 (382)
+.+..|....+|++..... ...+++|+...... ..-...+|..+++.+..... ..++++.+..+ ++++|
T Consensus 7 ~~l~~g~~g~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPT---GRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEY 83 (277)
T ss_pred hheeccCCceEEEEEEcCC---CcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEec
Confidence 4566777789999876432 24788898754321 12233567777777763222 23455544322 58999
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++|.+|.. .+.. + .. + +.....+. ..+...+..|
T Consensus 84 ~~~~~L~~--------------~~~~-~--~l-----~--~~~~~~i~----------------------~~i~~~l~~l 117 (277)
T cd06917 84 AEGGSVRT--------------LMKA-G--PI-----A--EKYISVII----------------------REVLVALKYI 117 (277)
T ss_pred CCCCcHHH--------------HHHc-c--CC-----C--HHHHHHHH----------------------HHHHHHHHHH
Confidence 98865421 1110 0 10 1 11111111 1122222222
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
. ...++|+|+.|.||++++ ++.+.++||..+..
T Consensus 118 h--------~~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~~ 150 (277)
T cd06917 118 H--------KVGVIHRDIKAANILVTN-TGNVKLCDFGVAAL 150 (277)
T ss_pred H--------hCCcccCCcCHHHEEEcC-CCCEEEccCCceee
Confidence 2 236899999999999985 68899999987643
No 174
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.23 E-value=0.0027 Score=57.88 Aligned_cols=138 Identities=13% Similarity=0.169 Sum_probs=77.1
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc-ccchHHHHHHHHHHHhCCCCceEEEEeC--Cc--eEEEeec
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI-VINRQRELQAIKYLSAAGFGAKLLAVFG--NG--MVQSFIN 140 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~-~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g--~i~e~i~ 140 (382)
.+.+..|....+|++...... ..+++|+....... .-...+|..+++.+...++ .++++... +. .+++|++
T Consensus 8 ~~~l~~g~~~~v~~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~l~~e~~~ 83 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIATG---ELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNI-VAYFGSYLRRDKLWIVMEYCG 83 (262)
T ss_pred EEEecCCCceEEEEeEecCCC---CEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCCh-hceEEEEEeCCEEEEEEeCCC
Confidence 466778888899998765421 36888987643222 2223566666666644444 34555442 22 5889998
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|..+.. ... . +.... + ...+..++ .++...+..|.
T Consensus 84 ~~~l~~-------~~~-------~-~~~~l-----~--~~~~~~~~----------------------~ql~~~l~~lh- 118 (262)
T cd06613 84 GGSLQD-------IYQ-------V-TRGPL-----S--ELQIAYVC----------------------RETLKGLAYLH- 118 (262)
T ss_pred CCcHHH-------HHH-------h-hccCC-----C--HHHHHHHH----------------------HHHHHHHHHHH-
Confidence 866531 011 0 00000 0 01111111 11222222222
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||++++ ++.+.|.||..+..
T Consensus 119 -------~~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~ 150 (262)
T cd06613 119 -------ETGKIHRDIKGANILLTE-DGDVKLADFGVSAQ 150 (262)
T ss_pred -------hCCceecCCChhhEEECC-CCCEEECccccchh
Confidence 235899999999999975 67899999997754
No 175
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.22 E-value=0.0016 Score=61.08 Aligned_cols=137 Identities=13% Similarity=0.187 Sum_probs=74.8
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc-ccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEee
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI-VINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSFI 139 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~-~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~i 139 (382)
.++.+..|..+.+|++..... ...+.+|........ .-...+|..+++.+...++ .++++.+. +. .|++|+
T Consensus 24 ~~~~lg~g~~~~v~~~~~~~~---~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v-~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 24 RFEKIGQGASGTVYTAMDVAT---GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI-VNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred eEEEecCCCCeEEEEEEECCC---CcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCE-eeEEEEEEeCCEEEEeeccc
Confidence 345677888889999875332 136888876543211 1122456666665543333 34444432 22 589999
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
+|.++.. .+ +.... + +..+..++ ..+...+..+.
T Consensus 100 ~~~~L~~--------------~~---~~~~~-----~--~~~~~~i~----------------------~ql~~aL~~LH 133 (296)
T cd06654 100 AGGSLTD--------------VV---TETCM-----D--EGQIAAVC----------------------RECLQALEFLH 133 (296)
T ss_pred CCCCHHH--------------HH---HhcCC-----C--HHHHHHHH----------------------HHHHHHHHHHH
Confidence 8865421 01 01000 0 11111111 11222232222
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||+++. ++.+.++||+.+..
T Consensus 134 --------~~gi~H~dLkp~Nill~~-~~~~kl~dfg~~~~ 165 (296)
T cd06654 134 --------SNQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQ 165 (296)
T ss_pred --------HCCcccCCCCHHHEEEcC-CCCEEECccccchh
Confidence 125899999999999975 67899999997654
No 176
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=97.21 E-value=0.0025 Score=57.94 Aligned_cols=136 Identities=14% Similarity=0.182 Sum_probs=74.7
Q ss_pred EecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCC----ceEEEeecC
Q 016788 68 TVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGN----GMVQSFINA 141 (382)
Q Consensus 68 ~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~----g~i~e~i~G 141 (382)
.|..|....+|++..... ...+++|........ .....+|..+++.+...++ +++++.+.. .+|+||++|
T Consensus 2 ~lg~g~~g~vy~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 2 RIGRGNFGEVFSGRLRAD---NTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-VRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred ccCcccCccEEEEEEecC---CceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCc-ceEEEEEcCCCCeEEEEeeccC
Confidence 355666778999877532 136888876543211 1123567777776644333 456655432 268899988
Q ss_pred CcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHH
Q 016788 142 RTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKEL 221 (382)
Q Consensus 142 ~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 221 (382)
.++.. .+ +... . +..+.....++ .++.+.+..|.
T Consensus 78 ~~L~~--------------~~---~~~~---~--~~~~~~~~~~~----------------------~qi~~~L~~lH-- 111 (252)
T cd05084 78 GDFLT--------------FL---RTEG---P--RLKVKELIQMV----------------------ENAAAGMEYLE-- 111 (252)
T ss_pred CcHHH--------------HH---HhCC---C--CCCHHHHHHHH----------------------HHHHHHHHHHH--
Confidence 64421 11 1100 0 00111111111 11222222222
Q ss_pred hcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 222 AGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 222 ~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||++++ ++.+.++||+.+..
T Consensus 112 ------~~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~ 143 (252)
T cd05084 112 ------SKHCIHRDLAARNCLVTE-KNVLKISDFGMSRE 143 (252)
T ss_pred ------hCCccccccchheEEEcC-CCcEEECccccCcc
Confidence 225799999999999975 67899999998764
No 177
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.21 E-value=0.0007 Score=63.37 Aligned_cols=30 Identities=23% Similarity=0.419 Sum_probs=25.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 121 ~i~H~dlkp~NIli~~-~~~~kl~Dfg~~~~ 150 (291)
T cd05612 121 EIVYRDLKPENILLDK-EGHIKLTDFGFAKK 150 (291)
T ss_pred CeeecCCCHHHeEECC-CCCEEEEecCcchh
Confidence 5899999999999975 67899999987653
No 178
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=97.20 E-value=0.0013 Score=60.00 Aligned_cols=30 Identities=23% Similarity=0.419 Sum_probs=25.8
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||..+..
T Consensus 117 ~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~ 146 (260)
T cd05611 117 GIIHRDIKPENLLIDQ-TGHLKLTDFGLSRN 146 (260)
T ss_pred CeecCCCCHHHeEECC-CCcEEEeeccccee
Confidence 5899999999999975 67899999986653
No 179
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.20 E-value=0.0035 Score=59.07 Aligned_cols=137 Identities=19% Similarity=0.280 Sum_probs=74.8
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEe-CCc---eEEEee
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVF-GNG---MVQSFI 139 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~-~~g---~i~e~i 139 (382)
++.|..|....+|++..... ...+.+|+....... .....+|.++++.+...++ .++++.+ .++ +++||+
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPS---GLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYI-VGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred EeeccCCCCeEEEEEEEcCC---CeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCC-CeEEEEEeeCCEEEEEeecc
Confidence 45666777778999876532 135677776543211 1123467777776644443 3455443 222 589999
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
+|..|.. + +.+-. . .+ ......+. ..+.+.+..|.
T Consensus 82 ~~~~L~~-------~-------l~~~~--~-----~~--~~~~~~~~----------------------~~i~~~l~~lH 116 (308)
T cd06615 82 DGGSLDQ-------V-------LKKAG--R-----IP--ENILGKIS----------------------IAVLRGLTYLR 116 (308)
T ss_pred CCCcHHH-------H-------HHhcC--C-----CC--HHHHHHHH----------------------HHHHHHHHHHH
Confidence 8865521 1 11100 0 01 11111111 11222233332
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
+ ...++|+|++|.||++++ ++.+.++||..+.
T Consensus 117 ~-------~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~ 148 (308)
T cd06615 117 E-------KHKIMHRDVKPSNILVNS-RGEIKLCDFGVSG 148 (308)
T ss_pred h-------hCCEEECCCChHHEEEec-CCcEEEccCCCcc
Confidence 1 235899999999999975 6789999998765
No 180
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=97.20 E-value=0.00083 Score=63.80 Aligned_cols=30 Identities=27% Similarity=0.327 Sum_probs=26.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||+++. ++.+.|+||..+..
T Consensus 116 ~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~ 145 (321)
T cd05603 116 NIIYRDLKPENILLDS-QGHVVLTDFGLCKE 145 (321)
T ss_pred CeEeccCCHHHeEECC-CCCEEEccCCCCcc
Confidence 6899999999999975 67899999997754
No 181
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.19 E-value=0.0019 Score=60.66 Aligned_cols=29 Identities=28% Similarity=0.480 Sum_probs=25.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 158 ~ivH~dlkp~Nill~~-~~~~kl~DfG~~~ 186 (304)
T cd05096 158 NFVHRDLATRNCLVGE-NLTIKIADFGMSR 186 (304)
T ss_pred CccccCcchhheEEcC-CccEEECCCccce
Confidence 5899999999999975 6789999999775
No 182
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.19 E-value=0.002 Score=58.95 Aligned_cols=30 Identities=30% Similarity=0.464 Sum_probs=26.3
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..++|+|++|+||++++ ++.+.|+||..+.
T Consensus 120 ~~i~H~dl~~~ni~~~~-~~~~~l~d~g~~~ 149 (265)
T cd06605 120 HKIIHRDVKPSNILVNS-RGQIKLCDFGVSG 149 (265)
T ss_pred CCeecCCCCHHHEEECC-CCCEEEeecccch
Confidence 57999999999999985 6789999998664
No 183
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.19 E-value=0.0049 Score=56.14 Aligned_cols=137 Identities=16% Similarity=0.256 Sum_probs=75.3
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeCC----ceEEEeec
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFGN----GMVQSFIN 140 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~~----g~i~e~i~ 140 (382)
+.|+.|....+|++..... ...+++|+...... ......+|...+..+...++ ++++..+.. ..|++|++
T Consensus 7 ~~i~~g~~~~v~~~~~~~~---~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~ 82 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPT---GKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYV-VKCYGAFYKEGEISIVLEYMD 82 (264)
T ss_pred eeeeecCCeEEEEEEEcCC---CcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCe-eeEEEEEccCCeEEEEEEecC
Confidence 5666666678899877642 24788888765432 11223456666666653333 455554432 26899999
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|.++... .. .-+ .. + ......++ ..+.+.+..+
T Consensus 83 ~~~L~~~-------l~-------~~~--~l-----~--~~~~~~~~----------------------~~l~~~l~~l-- 115 (264)
T cd06623 83 GGSLADL-------LK-------KVG--KI-----P--EPVLAYIA----------------------RQILKGLDYL-- 115 (264)
T ss_pred CCcHHHH-------HH-------HcC--CC-----C--HHHHHHHH----------------------HHHHHHHHHH--
Confidence 8755311 11 000 00 0 00011111 1111222222
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.....++|+|++|.||++++ ++.+.++||..+..
T Consensus 116 -----h~~~~~~H~~l~~~ni~~~~-~~~~~l~df~~~~~ 149 (264)
T cd06623 116 -----HTKRHIIHRDIKPSNLLINS-KGEVKIADFGISKV 149 (264)
T ss_pred -----hccCCCccCCCCHHHEEECC-CCCEEEccCcccee
Confidence 22157899999999999975 68899999987654
No 184
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.18 E-value=0.0024 Score=60.03 Aligned_cols=83 Identities=12% Similarity=0.238 Sum_probs=49.0
Q ss_pred CCeEE-EEecceeeeeEEEEEecC----CCCCCeeEEEEEcCCCC--CcccchHHHHHHHHHHHhCCCCceEEEEeCC-c
Q 016788 62 SRFSV-DTVSGGITNLLLKVTVKE----ESGNDVSVTVRLYGPNT--DIVINRQRELQAIKYLSAAGFGAKLLAVFGN-G 133 (382)
Q Consensus 62 ~~~~i-~~l~gG~tN~~y~v~~~~----~~~~~~~~vlRi~~~~~--~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g 133 (382)
+.+++ .+|..|....+|++.... .......+++|+..... ...-+..+|..+++.+..+.-..++++.+.. +
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 33444 677778888999886421 11122367888875432 1122345777888777554444556655432 2
Q ss_pred ---eEEEeecCCcC
Q 016788 134 ---MVQSFINARTL 144 (382)
Q Consensus 134 ---~i~e~i~G~~l 144 (382)
+|++|++|.+|
T Consensus 95 ~~~lv~e~~~~~~L 108 (304)
T cd05101 95 PLYVIVEYASKGNL 108 (304)
T ss_pred ceEEEEecCCCCcH
Confidence 68999987644
No 185
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.17 E-value=0.0044 Score=57.70 Aligned_cols=79 Identities=15% Similarity=0.202 Sum_probs=45.7
Q ss_pred EEEecceeeeeEEEEEecCCC--CCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKEES--GNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~--~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e 137 (382)
.+.+..|....+|++...... .....+.+|+...... ...+..+|..+++.+.++....++++.+. ++ .|++
T Consensus 17 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e 96 (293)
T cd05053 17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVE 96 (293)
T ss_pred eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEE
Confidence 356777777899998764321 2234677887754321 11223467777776644333345555543 22 5889
Q ss_pred eecCCcC
Q 016788 138 FINARTL 144 (382)
Q Consensus 138 ~i~G~~l 144 (382)
|++|.++
T Consensus 97 ~~~~~~L 103 (293)
T cd05053 97 YAAHGNL 103 (293)
T ss_pred eCCCCcH
Confidence 9988654
No 186
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.16 E-value=0.0028 Score=57.35 Aligned_cols=31 Identities=23% Similarity=0.261 Sum_probs=27.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
.++|+|++++||++++ ++.+.|+||..+...
T Consensus 123 ~~~H~dl~~~nil~~~-~~~~~l~d~~~~~~~ 153 (258)
T cd08215 123 KILHRDIKPQNIFLTS-NGLVKLGDFGISKVL 153 (258)
T ss_pred CEecccCChHHeEEcC-CCcEEECCccceeec
Confidence 7899999999999975 678999999987653
No 187
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=97.15 E-value=0.0017 Score=61.95 Aligned_cols=30 Identities=23% Similarity=0.315 Sum_probs=26.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 116 ~ivHrDlkp~Nili~~-~~~~kl~Dfg~a~~ 145 (330)
T cd05586 116 DIVYRDLKPENILLDA-TGHIALCDFGLSKA 145 (330)
T ss_pred CeEeccCCHHHeEECC-CCCEEEecCCcCcC
Confidence 5899999999999975 67899999998754
No 188
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.15 E-value=0.0027 Score=57.71 Aligned_cols=31 Identities=23% Similarity=0.224 Sum_probs=26.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
.++|+|+.|.||++++ ++.+.+.||+.+...
T Consensus 121 ~i~h~dl~p~ni~~~~-~~~~kl~d~~~~~~~ 151 (256)
T cd08221 121 GILHRDIKTLNIFLTK-AGLIKLGDFGISKIL 151 (256)
T ss_pred CccccCCChHhEEEeC-CCCEEECcCcceEEc
Confidence 5789999999999985 678999999977644
No 189
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.14 E-value=0.0056 Score=55.63 Aligned_cols=74 Identities=19% Similarity=0.162 Sum_probs=44.9
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCC----ceEEEeecC
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGN----GMVQSFINA 141 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~----g~i~e~i~G 141 (382)
.+.+..|....+|++....+ ..+.+|+.........+...|.++++.+...++ +++++.+.. ..+++|++|
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~----~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEK----RKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKL-VQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred EeeecCcccceEEEEEEeCC----CeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCe-eeEEEEEccCCceEEEEEcCCC
Confidence 35667777789999876543 268888875433221233567777777654433 345555432 268899887
Q ss_pred CcC
Q 016788 142 RTL 144 (382)
Q Consensus 142 ~~l 144 (382)
..+
T Consensus 84 ~~L 86 (256)
T cd05112 84 GCL 86 (256)
T ss_pred CcH
Confidence 544
No 190
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.13 E-value=0.0043 Score=58.18 Aligned_cols=74 Identities=18% Similarity=0.231 Sum_probs=44.6
Q ss_pred eEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeC--Cc--eEEE
Q 016788 64 FSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFG--NG--MVQS 137 (382)
Q Consensus 64 ~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g--~i~e 137 (382)
..+..|..|....+|++..... ...+++|....... ......+|..+++.+...++ ++++..+. +. +|++
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 9 IKLDKLGEGTYATVYKGRSKLT---DNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-VTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred EEeeEeccCcCEEEEEEEEcCC---CcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCc-ceEEEEEecCCeEEEEEe
Confidence 3456788888889999876532 13678887643221 12233567777777754444 34555442 22 5888
Q ss_pred eecC
Q 016788 138 FINA 141 (382)
Q Consensus 138 ~i~G 141 (382)
|++|
T Consensus 85 ~~~~ 88 (301)
T cd07873 85 YLDK 88 (301)
T ss_pred cccc
Confidence 8765
No 191
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.13 E-value=0.0041 Score=57.54 Aligned_cols=139 Identities=17% Similarity=0.219 Sum_probs=75.3
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC--Cc-ccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEEEe
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT--DI-VINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~--~~-~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~e~ 138 (382)
++.|..|....+|++..... +..+++|+..... +. .....+|..+++.+...+ .+++++.+.+ + .|++|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKT---GQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPN-IVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred eeEecccCceEEEEEEECCC---CcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCC-EeeeEEEEeeCCeEEEEEec
Confidence 46777888889999986532 2378888764321 11 112356777777665222 2455555432 2 58888
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++|. +. ..+.+ ... .. +.....+..++ .++.+.+..|
T Consensus 81 ~~~~-l~--------------~~~~~---~~~-~~--~~~~~~~~~~~----------------------~qi~~~L~~l 117 (285)
T cd07861 81 LSMD-LK--------------KYLDS---LPK-GQ--YMDAELVKSYL----------------------YQILQGILFC 117 (285)
T ss_pred CCCC-HH--------------HHHhc---CCC-CC--cCCHHHHHHHH----------------------HHHHHHHHHH
Confidence 8652 11 00111 100 00 00011111111 1222233333
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
. ...++|+|++|.||++++ ++.+.|+||..+..
T Consensus 118 H--------~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~ 150 (285)
T cd07861 118 H--------SRRVLHRDLKPQNLLIDN-KGVIKLADFGLARA 150 (285)
T ss_pred H--------hCCeeecCCCHHHEEEcC-CCcEEECcccceee
Confidence 2 136899999999999975 67899999997753
No 192
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=97.12 E-value=0.001 Score=60.78 Aligned_cols=139 Identities=15% Similarity=0.188 Sum_probs=76.8
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e 137 (382)
++.+..|....+|++..... ...+.+|+..... ...-...+|.++++.+...++ ++++..+.++ .|++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDT---KKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFL-VNLWYSFQDEENMYLVVD 80 (258)
T ss_pred EEEeccCCCceEEEEEEccC---CcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCCh-HHHHHhhcCCCeEEEEEe
Confidence 46777787889999987532 2478889875421 111123556666665544333 2333333222 5889
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|.++... +.+-+. . + ...+..++ .++.+.+..
T Consensus 81 ~~~~~~L~~~--------------l~~~~~--l-----~--~~~~~~~~----------------------~~i~~~l~~ 115 (258)
T cd05578 81 LLLGGDLRYH--------------LSQKVK--F-----S--EEQVKFWI----------------------CEIVLALEY 115 (258)
T ss_pred CCCCCCHHHH--------------HHhcCC--c-----C--HHHHHHHH----------------------HHHHHHHHH
Confidence 9988655310 111000 0 0 11111111 122222333
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
|. ...++|+|++|.||++++ ++.+.++||+.+....
T Consensus 116 lh--------~~~i~h~dl~~~nil~~~-~~~~~l~d~~~~~~~~ 151 (258)
T cd05578 116 LH--------SKGIIHRDIKPDNILLDE-QGHVHITDFNIATKVT 151 (258)
T ss_pred HH--------hCCeeccCCCHHHeEEcC-CCCEEEeecccccccC
Confidence 32 125899999999999975 6789999999776543
No 193
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=97.12 E-value=0.002 Score=61.31 Aligned_cols=30 Identities=27% Similarity=0.336 Sum_probs=26.4
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 116 givH~Dlkp~NIll~~-~~~~kL~DfG~~~~ 145 (325)
T cd05604 116 NIVYRDLKPENILLDS-QGHVVLTDFGLCKE 145 (325)
T ss_pred CeeecCCCHHHeEECC-CCCEEEeecCCccc
Confidence 6899999999999975 67899999998754
No 194
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.12 E-value=0.0024 Score=58.63 Aligned_cols=74 Identities=11% Similarity=0.138 Sum_probs=43.7
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC-cccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEeecC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD-IVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSFINA 141 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~-~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~i~G 141 (382)
..+..|....+|++...+. ...+.+|....... ......+|..+++.+...++. ++++.+..+ .|++|++|
T Consensus 14 ~~lg~g~~g~v~~~~~~~~---~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~ 89 (268)
T cd06624 14 VVLGKGTYGIVYAARDLST---QVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIV-QYLGSDSENGFFKIFMEQVPG 89 (268)
T ss_pred EEEecCCceEEEEeEecCC---CcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCee-eeeeeeccCCEEEEEEecCCC
Confidence 4566677778999976543 23688886544321 122335677777666544443 455554322 58899988
Q ss_pred CcC
Q 016788 142 RTL 144 (382)
Q Consensus 142 ~~l 144 (382)
.+|
T Consensus 90 ~~L 92 (268)
T cd06624 90 GSL 92 (268)
T ss_pred CCH
Confidence 655
No 195
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.11 E-value=0.0027 Score=57.30 Aligned_cols=139 Identities=15% Similarity=0.216 Sum_probs=76.8
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC---cccchHHHHHHHHHHHhCCCCceEEEEe--C--Cc--eEEE
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD---IVINRQRELQAIKYLSAAGFGAKLLAVF--G--NG--MVQS 137 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~---~~idr~~E~~~l~~l~~~gl~P~~~~~~--~--~g--~i~e 137 (382)
+.+..|-...+|++..... ...+++|+...... ......+|...++.+...++. ++++.. . +. .+++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDT---GELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIV-RYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred eEeeecCceEEEEEEECCC---CcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEe-eEEEEEecCCCCeEEEEEE
Confidence 5666777788999877632 24788888755431 111224566666666544443 344332 2 22 5888
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|.++.. .+.... .. .+.....++ ..+...+..
T Consensus 82 ~~~~~~L~~--------------~~~~~~--~~-------~~~~~~~~~----------------------~~l~~~l~~ 116 (260)
T cd06606 82 YVSGGSLSS--------------LLKKFG--KL-------PEPVIRKYT----------------------RQILEGLAY 116 (260)
T ss_pred ecCCCcHHH--------------HHHHcC--CC-------CHHHHHHHH----------------------HHHHHHHHH
Confidence 988754421 111110 00 011111111 112222222
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCc
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYR 263 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~ 263 (382)
|.+ ..++|+|++|.||++++ ++.+.|+||..+.....
T Consensus 117 lh~--------~~~~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 117 LHS--------NGIVHRDIKGANILVDS-DGVVKLADFGCAKRLGD 153 (260)
T ss_pred HHH--------CCccccCCCHHHEEEcC-CCCEEEcccccEEeccc
Confidence 321 36899999999999985 68899999987765443
No 196
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.11 E-value=0.0082 Score=55.86 Aligned_cols=140 Identities=11% Similarity=0.016 Sum_probs=75.9
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC----cccchHHHHHHHHHHHhCCCCceEEEEeC-Cc--eEEEe
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD----IVINRQRELQAIKYLSAAGFGAKLLAVFG-NG--MVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~----~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g--~i~e~ 138 (382)
...|..|....+|++..... ...+.+|+...... ......+|..+++.+....+.+-...+.. +. ++++|
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 5 YRVLGKGGFGEVCACQVRAT---GKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred EEEEecCCCeEEEEEEECCC---CcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 45677777789998876532 23688888754311 11112457777777765555443222222 22 68999
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++|..+... . +... .. +-.+.....+. .++...+..|
T Consensus 82 ~~~~~L~~~-------~----------~~~~--~~--~~~~~~~~~~~----------------------~ql~~~l~~l 118 (285)
T cd05632 82 MNGGDLKFH-------I----------YNMG--NP--GFEEERALFYA----------------------AEILCGLEDL 118 (285)
T ss_pred ccCccHHHH-------H----------HHhc--CC--CCCHHHHHHHH----------------------HHHHHHHHHH
Confidence 987544210 0 0000 00 00111111111 1122222222
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
. ...++|+|++|.||++++ ++.+.++||..+..
T Consensus 119 H--------~~~iiH~dikp~Nili~~-~~~~kl~Dfg~~~~ 151 (285)
T cd05632 119 H--------RENTVYRDLKPENILLDD-YGHIRISDLGLAVK 151 (285)
T ss_pred H--------hCCeeecCCCHHHEEECC-CCCEEEecCCccee
Confidence 1 125899999999999975 57899999997743
No 197
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=97.10 E-value=0.0071 Score=55.10 Aligned_cols=30 Identities=23% Similarity=0.437 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||+.+..
T Consensus 115 ~i~H~di~p~nili~~-~~~~kl~df~~~~~ 144 (257)
T cd05060 115 HFVHRDLAARNVLLVN-RHQAKISDFGMSRA 144 (257)
T ss_pred CeeccCcccceEEEcC-CCcEEeccccccce
Confidence 5899999999999975 67899999997753
No 198
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.10 E-value=0.0029 Score=58.94 Aligned_cols=77 Identities=17% Similarity=0.219 Sum_probs=44.3
Q ss_pred EEecceeeeeEEEEEecCCC--CCCeeEEEEEcCCCCCc-ccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEee
Q 016788 67 DTVSGGITNLLLKVTVKEES--GNDVSVTVRLYGPNTDI-VINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSFI 139 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~--~~~~~~vlRi~~~~~~~-~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~i 139 (382)
..+..|....+|++...+.. .....+.+|........ .-+..+|..+++.+...++ +++++.+..+ .|+||+
T Consensus 11 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~ 89 (288)
T cd05093 11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI-VKFYGVCVEGDPLIMVFEYM 89 (288)
T ss_pred cccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCc-ceEEEEEecCCccEEEEEcC
Confidence 45667777899998753321 11234677776543322 1133567777776654333 4555554322 689999
Q ss_pred cCCcC
Q 016788 140 NARTL 144 (382)
Q Consensus 140 ~G~~l 144 (382)
+|.++
T Consensus 90 ~~~~L 94 (288)
T cd05093 90 KHGDL 94 (288)
T ss_pred CCCCH
Confidence 87655
No 199
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=97.09 E-value=0.0038 Score=57.97 Aligned_cols=29 Identities=17% Similarity=0.353 Sum_probs=25.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 117 ~ivH~dikp~Nil~~~-~~~~~l~dfg~~~ 145 (279)
T cd05633 117 FVVYRDLKPANILLDE-HGHVRISDLGLAC 145 (279)
T ss_pred CcCCCCCCHHHEEECC-CCCEEEccCCcce
Confidence 4799999999999975 6789999999774
No 200
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.09 E-value=0.0057 Score=57.81 Aligned_cols=80 Identities=15% Similarity=0.211 Sum_probs=46.1
Q ss_pred EEEEecceeeeeEEEEEecCC----CCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---e
Q 016788 65 SVDTVSGGITNLLLKVTVKEE----SGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---M 134 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~----~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~ 134 (382)
-.+.+..|....+|++...+. ......+.+|+...... ...+...|..+++.+..+.-..++++.+. ++ +
T Consensus 16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (314)
T cd05099 16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYV 95 (314)
T ss_pred eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEE
Confidence 346777888889999875321 11123577888764321 11223467666666644333356666543 22 5
Q ss_pred EEEeecCCcC
Q 016788 135 VQSFINARTL 144 (382)
Q Consensus 135 i~e~i~G~~l 144 (382)
+++|++|.+|
T Consensus 96 v~e~~~~g~L 105 (314)
T cd05099 96 IVEYAAKGNL 105 (314)
T ss_pred EEecCCCCcH
Confidence 8899988655
No 201
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=97.08 E-value=0.0022 Score=61.61 Aligned_cols=139 Identities=17% Similarity=0.225 Sum_probs=77.2
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~ 136 (382)
.+..|..|....+|++...... ...+.+|+..... ...-...+|..+++.+...++ .++++.+.+ + +|+
T Consensus 34 ~~~~ig~G~~g~Vy~a~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~I-v~~~~~~~~~~~~~lv~ 110 (340)
T PTZ00426 34 FIRTLGTGSFGRVILATYKNED--FPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFC-VNLYGSFKDESYLYLVL 110 (340)
T ss_pred EEEEEeecCCeEEEEEEEECCC--CeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCC-cceEEEEEeCCEEEEEE
Confidence 3577888888899998754321 1367888764321 111122457777776654333 355555432 2 589
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|..|.. .+.+ . ...+ ......+. .++...+.
T Consensus 111 Ey~~~g~L~~--------------~i~~---~----~~~~--~~~~~~~~----------------------~qi~~aL~ 145 (340)
T PTZ00426 111 EFVIGGEFFT--------------FLRR---N----KRFP--NDVGCFYA----------------------AQIVLIFE 145 (340)
T ss_pred eCCCCCcHHH--------------HHHH---c----CCCC--HHHHHHHH----------------------HHHHHHHH
Confidence 9998764421 0110 0 0001 11111111 12222233
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.|. ...++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 146 ~LH--------~~~ivHrDLkp~NILl~~-~~~ikL~DFG~a~~ 180 (340)
T PTZ00426 146 YLQ--------SLNIVYRDLKPENLLLDK-DGFIKMTDFGFAKV 180 (340)
T ss_pred HHH--------HCCeEccCCCHHHEEECC-CCCEEEecCCCCee
Confidence 332 236899999999999975 67899999998753
No 202
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.08 E-value=0.011 Score=53.79 Aligned_cols=74 Identities=14% Similarity=0.187 Sum_probs=43.5
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEee
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSFI 139 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~i 139 (382)
.+.+..|....+|++..... ...+++|.+..... ...+...|..+++.+...++ ++++..+. ++ .+++|+
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNS---DQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNI-VAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred EEEeeccCCeEEEEEEEcCC---CceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEECCEEEEEEeeC
Confidence 46677788889999976543 24788888743221 11223456666666544444 44454442 22 588999
Q ss_pred cCCc
Q 016788 140 NART 143 (382)
Q Consensus 140 ~G~~ 143 (382)
+|..
T Consensus 81 ~~~~ 84 (255)
T cd08219 81 DGGD 84 (255)
T ss_pred CCCc
Confidence 8753
No 203
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=97.07 E-value=0.0022 Score=60.97 Aligned_cols=30 Identities=27% Similarity=0.327 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 116 givH~dikp~NIll~~-~~~~kl~Dfg~~~~ 145 (323)
T cd05575 116 NIIYRDLKPENILLDS-QGHVVLTDFGLCKE 145 (323)
T ss_pred CeEeCCCCHHHeEECC-CCcEEEeccCCCcc
Confidence 5899999999999975 67899999997653
No 204
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=97.07 E-value=0.0015 Score=59.39 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=26.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
.++|+|++|.||++++ ++.+.++||..+...
T Consensus 113 ~i~H~di~~~nil~~~-~~~~~l~dfg~~~~~ 143 (265)
T cd05579 113 GIIHRDLKPDNILIDS-NGHLKLTDFGLSKVG 143 (265)
T ss_pred CeecCCCCHHHeEEcC-CCCEEEEecccchhc
Confidence 6899999999999975 678999999877654
No 205
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=97.07 E-value=0.0084 Score=57.25 Aligned_cols=30 Identities=20% Similarity=0.406 Sum_probs=25.7
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..++|+|++|.|||++. ++.+.|+||..+.
T Consensus 121 ~~iiHrDlkp~Nill~~-~~~~kl~DfG~a~ 150 (331)
T cd05624 121 LHYVHRDIKPDNVLLDM-NGHIRLADFGSCL 150 (331)
T ss_pred CCeeeccCchHHEEEcC-CCCEEEEecccee
Confidence 36899999999999975 6789999998763
No 206
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.07 E-value=0.004 Score=58.00 Aligned_cols=73 Identities=19% Similarity=0.251 Sum_probs=43.8
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC---cccchHHHHHHHHHHHhCCCCceEEEEe---CC------c
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD---IVINRQRELQAIKYLSAAGFGAKLLAVF---GN------G 133 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~---~~idr~~E~~~l~~l~~~gl~P~~~~~~---~~------g 133 (382)
...|..|....+|++..... ...+++|....... ......+|..+++.+......++++..+ .. .
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~---~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~ 82 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNT---GKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY 82 (295)
T ss_pred eeEecccCCeEEEEEEECCC---CcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence 45677777888999986532 24788898654321 1123356888888776543334555443 12 2
Q ss_pred eEEEeecC
Q 016788 134 MVQSFINA 141 (382)
Q Consensus 134 ~i~e~i~G 141 (382)
.|++|++|
T Consensus 83 lv~e~~~~ 90 (295)
T cd07837 83 LVFEYLDS 90 (295)
T ss_pred EEeeccCc
Confidence 57888765
No 207
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.07 E-value=0.0059 Score=55.34 Aligned_cols=30 Identities=27% Similarity=0.358 Sum_probs=26.2
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 113 ~i~h~di~p~nili~~-~~~~~l~d~g~~~~ 142 (251)
T cd05041 113 NCIHRDLAARNCLVGE-NNVLKISDFGMSRE 142 (251)
T ss_pred CEehhhcCcceEEEcC-CCcEEEeecccccc
Confidence 5899999999999975 67899999997764
No 208
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=97.06 E-value=0.0053 Score=57.73 Aligned_cols=137 Identities=16% Similarity=0.259 Sum_probs=75.7
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc----ccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI----VINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~----~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e 137 (382)
++.+..|....+|++..... ...+++|........ .-...+|..+++.+...++ +++++.+. ++ +|+|
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~---~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKET---RQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFV-VSMFCSFETKRHLCMVME 81 (305)
T ss_pred eeEeecCCCeeEEEEEECCC---CcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCe-eeeEEEEecCCEEEEEEe
Confidence 46677777788998876543 247888876543211 1112355555555543333 45665543 22 5899
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|..+.. .+..-+ .. + +.....++ .++...+..
T Consensus 82 ~~~g~~L~~--------------~l~~~~--~~-----~--~~~~~~~~----------------------~~i~~~l~~ 116 (305)
T cd05609 82 YVEGGDCAT--------------LLKNIG--AL-----P--VDMARMYF----------------------AETVLALEY 116 (305)
T ss_pred cCCCCcHHH--------------HHHHcC--CC-----C--HHHHHHHH----------------------HHHHHHHHH
Confidence 998854421 111100 00 1 11111111 112222222
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
+.+ ..++|+|++|.||++++ .+.+.++||..+..
T Consensus 117 lH~--------~~i~H~dl~p~NIll~~-~~~~~l~dfg~~~~ 150 (305)
T cd05609 117 LHN--------YGIVHRDLKPDNLLITS-MGHIKLTDFGLSKI 150 (305)
T ss_pred HHH--------CCccccCCchHHEEECC-CCCEEEeeCCCccc
Confidence 221 25899999999999975 67899999998764
No 209
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.06 E-value=0.0028 Score=58.15 Aligned_cols=137 Identities=15% Similarity=0.175 Sum_probs=74.7
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC-cccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEeec
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD-IVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSFIN 140 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~-~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~i~ 140 (382)
++.+..|....+|++..... ...+++|+...... ......+|..+++.+...++. ++++.+. ++ +|+||++
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~---~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii-~~~~~~~~~~~~~iv~e~~~ 89 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHT---GELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIV-AYFGSYLSREKLWICMEYCG 89 (267)
T ss_pred hheeecCCCeEEEEEEECCC---CeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCee-eeeEEEEeCCEEEEEEeCCC
Confidence 35666777789999876432 13688888754322 111234566666655444443 4444432 22 5889988
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|.++.. . +|... + .+ ...+..+. .++.+.+..+.
T Consensus 90 ~~~L~~--------------~---~~~~~-~---~~--~~~~~~~~----------------------~qi~~~l~~lH- 123 (267)
T cd06646 90 GGSLQD--------------I---YHVTG-P---LS--ELQIAYVC----------------------RETLQGLAYLH- 123 (267)
T ss_pred CCcHHH--------------H---HHhcC-C---CC--HHHHHHHH----------------------HHHHHHHHHHH-
Confidence 755421 0 11100 0 01 11111111 11222232222
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|+||++++ ++.+.++||..+..
T Consensus 124 -------~~~i~H~dl~p~nill~~-~~~~~l~dfg~~~~ 155 (267)
T cd06646 124 -------SKGKMHRDIKGANILLTD-NGDVKLADFGVAAK 155 (267)
T ss_pred -------HCCccccCCCHHHEEECC-CCCEEECcCcccee
Confidence 136899999999999975 67799999998754
No 210
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.05 E-value=0.0073 Score=56.05 Aligned_cols=141 Identities=16% Similarity=0.253 Sum_probs=76.7
Q ss_pred EEEecceeeeeEEEEEecC-CCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEe--C--Cc--eEE
Q 016788 66 VDTVSGGITNLLLKVTVKE-ESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVF--G--NG--MVQ 136 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~-~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~--~--~g--~i~ 136 (382)
+..|..|....+|++.... +......+++|........ .-...+|..+++.+...++.+ +++.. . .+ +++
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~~lv~ 87 (284)
T cd05079 9 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK-YKGICTEDGGNGIKLIM 87 (284)
T ss_pred ceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeee-eeeEEecCCCCceEEEE
Confidence 4567777778899886432 1112346888887543221 112356777777665444433 44332 2 22 589
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|.+|.. . +.+ .. .+..+.....++ ..+...+.
T Consensus 88 e~~~g~~L~~-------~-------l~~---~~-----~~~~~~~~~~i~----------------------~~i~~aL~ 123 (284)
T cd05079 88 EFLPSGSLKE-------Y-------LPR---NK-----NKINLKQQLKYA----------------------VQICKGMD 123 (284)
T ss_pred EccCCCCHHH-------H-------HHh---cc-----CCCCHHHHHHHH----------------------HHHHHHHH
Confidence 9999876531 0 100 00 000111111111 12222233
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.+. ...++|+|++|.||++++ ++.+.|.||+.+..
T Consensus 124 ~lH--------~~gi~H~dlkp~Nil~~~-~~~~~l~dfg~~~~ 158 (284)
T cd05079 124 YLG--------SRQYVHRDLAARNVLVES-EHQVKIGDFGLTKA 158 (284)
T ss_pred HHH--------HCCeeecccchheEEEcC-CCCEEECCCccccc
Confidence 232 236899999999999975 67899999997753
No 211
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=97.04 E-value=0.004 Score=57.71 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 115 ~ivH~dikp~Nili~~-~~~~~l~Dfg~~~~ 144 (277)
T cd05607 115 DIVYRDMKPENVLLDD-QGNCRLSDLGLAVE 144 (277)
T ss_pred CEEEccCChHhEEEcC-CCCEEEeeceeeee
Confidence 6899999999999975 67899999997653
No 212
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.04 E-value=0.0033 Score=58.18 Aligned_cols=137 Identities=20% Similarity=0.273 Sum_probs=75.4
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcc---cchHHHHHHHHHHHhCCCCceEEEEeCC----ceEEEe
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIV---INRQRELQAIKYLSAAGFGAKLLAVFGN----GMVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~---idr~~E~~~l~~l~~~gl~P~~~~~~~~----g~i~e~ 138 (382)
++.|..|....+|++...+. ...+++|+........ -...+|..+++.+...++ +++++.+.. .+|+||
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKET---GQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENL-VNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred eeeeccCCCeEEEEEEECCC---CCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcch-hhHHHhcccCCeEEEEEec
Confidence 46777787788999887542 2478889875432111 112456666666644333 344444432 268999
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++|..+.. + . +. . . +-.+..+..+. .++...+..|
T Consensus 82 ~~~~~l~~-----------~---~---~~-~--~---~~~~~~~~~~~----------------------~~i~~~l~~L 116 (286)
T cd07846 82 VDHTVLDD-----------L---E---KY-P--N---GLDESRVRKYL----------------------FQILRGIEFC 116 (286)
T ss_pred CCccHHHH-----------H---H---hc-c--C---CCCHHHHHHHH----------------------HHHHHHHHHH
Confidence 98754321 0 0 00 0 0 00111111111 1122223223
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
. ...++|+|++|.||++++ ++.+.++||..+..
T Consensus 117 H--------~~~i~h~~l~p~ni~~~~-~~~~~l~dfg~~~~ 149 (286)
T cd07846 117 H--------SHNIIHRDIKPENILVSQ-SGVVKLCDFGFART 149 (286)
T ss_pred H--------HCCccccCCCHHHEEECC-CCcEEEEeeeeeee
Confidence 2 125899999999999975 67899999987654
No 213
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=97.03 E-value=0.01 Score=53.86 Aligned_cols=31 Identities=16% Similarity=0.239 Sum_probs=26.5
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.||++++ ++.+.++||..+..
T Consensus 120 ~~i~h~dl~~~nili~~-~~~~~l~df~~~~~ 150 (256)
T cd08529 120 KKILHRDIKSLNLFLDA-YDNVKIGDLGVAKL 150 (256)
T ss_pred CCcccCCCCcceEEEeC-CCCEEEccccccee
Confidence 37899999999999985 67899999987653
No 214
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.03 E-value=0.0075 Score=54.68 Aligned_cols=31 Identities=23% Similarity=0.382 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||+++++++.+.+.||+.+..
T Consensus 121 ~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (256)
T cd08220 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKI 151 (256)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEccCCCcee
Confidence 6899999999999975455689999998764
No 215
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=97.03 E-value=0.0038 Score=58.30 Aligned_cols=30 Identities=27% Similarity=0.396 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 122 ~i~H~dl~p~nill~~-~~~~~l~dfg~~~~ 151 (298)
T cd07841 122 WILHRDLKPNNLLIAS-DGVLKLADFGLARS 151 (298)
T ss_pred CeeecCCChhhEEEcC-CCCEEEccceeeee
Confidence 5799999999999985 67899999997753
No 216
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.03 E-value=0.0028 Score=58.05 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=26.5
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.||+++. ++.+.++||+.+..
T Consensus 125 ~~i~H~dl~~~nil~~~-~~~~~l~d~g~~~~ 155 (267)
T cd08228 125 RRVMHRDIKPANVFITA-TGVVKLGDLGLGRF 155 (267)
T ss_pred CCeeCCCCCHHHEEEcC-CCCEEECcccccee
Confidence 36899999999999975 67899999997654
No 217
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.02 E-value=0.0045 Score=59.10 Aligned_cols=79 Identities=13% Similarity=0.187 Sum_probs=46.0
Q ss_pred EEEecceeeeeEEEEEecCCC----CCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eE
Q 016788 66 VDTVSGGITNLLLKVTVKEES----GNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MV 135 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~----~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i 135 (382)
.+.|..|....+|++...+.. .....+.+|+....... .-...+|..+++.+..+.-..++++.+. ++ ++
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 96 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVL 96 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEE
Confidence 467777878899998753211 11235778877643211 1123567777777754433345666543 22 58
Q ss_pred EEeecCCcC
Q 016788 136 QSFINARTL 144 (382)
Q Consensus 136 ~e~i~G~~l 144 (382)
++|++|.+|
T Consensus 97 ~e~~~~g~L 105 (334)
T cd05100 97 VEYASKGNL 105 (334)
T ss_pred EecCCCCcH
Confidence 899887544
No 218
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.02 E-value=0.0043 Score=56.58 Aligned_cols=136 Identities=15% Similarity=0.202 Sum_probs=76.3
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC---cccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEee
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD---IVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSFI 139 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~---~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~i 139 (382)
+.|..|....+|++..... ...+++|+...... .......|..+++.+...++ .++++.+.++ .|+||+
T Consensus 6 ~~lg~G~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDT---GELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNL-VKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred eEeecCCCcEEEEEEECCC---CcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCCh-hheeeeEecCCEEEEEEecC
Confidence 5677788889999876432 13788888754322 12223566666666644333 4555554322 588999
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
+|.++.. . + +.... .+ ......++ ..+...+..|.
T Consensus 82 ~~~~L~~-------~-------~---~~~~~----~~--~~~~~~i~----------------------~~i~~~l~~lh 116 (264)
T cd06626 82 SGGTLEE-------L-------L---EHGRI----LD--EHVIRVYT----------------------LQLLEGLAYLH 116 (264)
T ss_pred CCCcHHH-------H-------H---hhcCC----CC--hHHHHHHH----------------------HHHHHHHHHHH
Confidence 8765521 0 1 11000 00 11111111 11222222222
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|+.++||++++ ++.+.|.||..+..
T Consensus 117 --------~~~i~H~dl~~~nil~~~-~~~~kl~d~g~~~~ 148 (264)
T cd06626 117 --------SHGIVHRDIKPANIFLDH-NGVIKLGDFGCAVK 148 (264)
T ss_pred --------HCCcccCCCCHHHEEECC-CCCEEEcccccccc
Confidence 125799999999999975 67899999997765
No 219
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=97.02 E-value=0.0011 Score=61.01 Aligned_cols=30 Identities=23% Similarity=0.384 Sum_probs=26.2
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||+.+..
T Consensus 122 ~~~H~dl~~~ni~i~~-~~~~~l~df~~~~~ 151 (280)
T cd05581 122 GIIHRDLKPENILLDK-DMHIKITDFGTAKV 151 (280)
T ss_pred CeeecCCCHHHeEECC-CCCEEecCCccccc
Confidence 5899999999999975 67899999997754
No 220
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.02 E-value=0.013 Score=63.01 Aligned_cols=75 Identities=12% Similarity=0.109 Sum_probs=44.9
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC---ccc-chHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD---IVI-NRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~---~~i-dr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e 137 (382)
+..|..|....+|++..... +..+.+|+...... ... ...+|..++..+...++. ++++... ++ ++++
T Consensus 7 i~~LGkGgfG~VYlA~d~~t---g~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIV-kl~~v~~d~~~lyLVME 82 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVC---SRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIV-PVYSICSDGDPVYYTMP 82 (932)
T ss_pred EEEEecCCCEEEEEEEECCC---CcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcC-eEEEEEeeCCEEEEEEE
Confidence 46777788889999976542 24788887654321 111 124566666666544443 4455442 22 5899
Q ss_pred eecCCcC
Q 016788 138 FINARTL 144 (382)
Q Consensus 138 ~i~G~~l 144 (382)
|++|.+|
T Consensus 83 Y~eGGSL 89 (932)
T PRK13184 83 YIEGYTL 89 (932)
T ss_pred cCCCCCH
Confidence 9998655
No 221
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=97.01 E-value=0.0067 Score=57.93 Aligned_cols=80 Identities=14% Similarity=0.132 Sum_probs=46.6
Q ss_pred EEEecceeeeeEEEEEecC--CCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEe--CCc---eEE
Q 016788 66 VDTVSGGITNLLLKVTVKE--ESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVF--GNG---MVQ 136 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~--~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~--~~g---~i~ 136 (382)
.+.|..|....+|++.... .......+.+|+...... ......+|..++..+..+.-..++++.+ +++ .|+
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIV 91 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEE
Confidence 3667888889999986421 111123578887654321 1112356777777775443334556543 233 589
Q ss_pred EeecCCcCC
Q 016788 137 SFINARTLT 145 (382)
Q Consensus 137 e~i~G~~l~ 145 (382)
||++|..|.
T Consensus 92 ey~~~g~L~ 100 (338)
T cd05102 92 EFCKYGNLS 100 (338)
T ss_pred ecCCCCcHH
Confidence 999986653
No 222
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.01 E-value=0.0032 Score=58.82 Aligned_cols=30 Identities=27% Similarity=0.450 Sum_probs=25.8
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||..+..
T Consensus 149 ~i~H~dlkp~Nill~~-~~~~kl~dfg~~~~ 178 (295)
T cd05097 149 NFVHRDLATRNCLVGN-HYTIKIADFGMSRN 178 (295)
T ss_pred CeeccccChhhEEEcC-CCcEEecccccccc
Confidence 5899999999999975 67899999987653
No 223
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=97.01 E-value=0.0047 Score=57.02 Aligned_cols=72 Identities=17% Similarity=0.298 Sum_probs=43.0
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC--C-cccchHHHHHHHHHHHhCCCCceEEEEe-CC--c---eEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT--D-IVINRQRELQAIKYLSAAGFGAKLLAVF-GN--G---MVQ 136 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~--~-~~idr~~E~~~l~~l~~~gl~P~~~~~~-~~--g---~i~ 136 (382)
++.+..|..+.+|++...+. +..+++|...... . ...+..+|..+++.+....+. ++++.. .. + +|+
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~---~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKT---GELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIV-RLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred eEEeccCCCeEEEEEEECCC---CeEEEEEEEecccccccchHHHHHHHHHHHhccCCCee-eheeeEecCCCCcEEEEe
Confidence 45677788889999987642 2478888876542 1 112335677777777644443 333332 22 2 578
Q ss_pred EeecC
Q 016788 137 SFINA 141 (382)
Q Consensus 137 e~i~G 141 (382)
+|+++
T Consensus 80 e~~~~ 84 (287)
T cd07840 80 EYMDH 84 (287)
T ss_pred ccccc
Confidence 88865
No 224
>PHA03212 serine/threonine kinase US3; Provisional
Probab=97.01 E-value=0.0078 Score=59.09 Aligned_cols=132 Identities=17% Similarity=0.207 Sum_probs=74.0
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEeec
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSFIN 140 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~i~ 140 (382)
.++.|..|....+|++..... ...+++|..... ...+|..+++.|...++. ++++.+. +. ++++++.
T Consensus 96 ~~~~lg~G~~g~V~~~~d~~~---~~~vaiK~~~~~-----~~~~E~~il~~l~HpnIv-~~~~~~~~~~~~~lv~e~~~ 166 (391)
T PHA03212 96 ILETFTPGAEGFAFACIDNKT---CEHVVIKAGQRG-----GTATEAHILRAINHPSII-QLKGTFTYNKFTCLILPRYK 166 (391)
T ss_pred EEEEEcCCCCeEEEEEEECCC---CCEEEEechhhh-----hhHHHHHHHHhCCCCCCC-CEeEEEEECCeeEEEEecCC
Confidence 457788888899999876543 246788864321 235788888888654443 4554432 22 4666654
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|. + .. .+..-+. .+ +..+..++ .++...+..+.+
T Consensus 167 ~~-L----------~~----~l~~~~~-------l~--~~~~~~i~----------------------~qi~~aL~ylH~ 200 (391)
T PHA03212 167 TD-L----------YC----YLAAKRN-------IA--ICDILAIE----------------------RSVLRAIQYLHE 200 (391)
T ss_pred CC-H----------HH----HHHhcCC-------CC--HHHHHHHH----------------------HHHHHHHHHHHh
Confidence 31 1 11 1111000 01 11111111 122222333321
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.|||++. .+.+.|+||..|..
T Consensus 201 --------~~IvHrDiKP~NIll~~-~~~vkL~DFG~a~~ 231 (391)
T PHA03212 201 --------NRIIHRDIKAENIFINH-PGDVCLGDFGAACF 231 (391)
T ss_pred --------CCcccCCCChHhEEEcC-CCCEEEEeCCcccc
Confidence 25899999999999975 67899999998753
No 225
>PHA03207 serine/threonine kinase US3; Provisional
Probab=97.00 E-value=0.0042 Score=60.89 Aligned_cols=135 Identities=16% Similarity=0.202 Sum_probs=74.4
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeC--Cc--eEEEeec
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFG--NG--MVQSFIN 140 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g--~i~e~i~ 140 (382)
.+..|..|....+|++...+. .....+++|...... ...+|..+++.+...++. +++..+. +. +++++..
T Consensus 96 i~~~Lg~G~~g~Vy~~~~~~~-~~~~~v~vK~~~~~~----~~~~E~~il~~l~h~~iv-~~~~~~~~~~~~~lv~e~~~ 169 (392)
T PHA03207 96 ILSSLTPGSEGEVFVCTKHGD-EQRKKVIVKAVTGGK----TPGREIDILKTISHRAII-NLIHAYRWKSTVCMVMPKYK 169 (392)
T ss_pred EEEeecCCCCeEEEEEEEcCC-ccceeEEEEeccccc----cHHHHHHHHHhcCCCCcc-ceeeeEeeCCEEEEEehhcC
Confidence 456778888889998865432 123467888764432 335788888888654443 4444432 21 4566654
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|.. .. .+.+- .+-.+.....+. .++...+..|.+
T Consensus 170 ~~l-----------~~----~l~~~---------~~l~~~~~~~i~----------------------~ql~~aL~~LH~ 203 (392)
T PHA03207 170 CDL-----------FT----YVDRS---------GPLPLEQAITIQ----------------------RRLLEALAYLHG 203 (392)
T ss_pred CCH-----------HH----HHHhc---------CCCCHHHHHHHH----------------------HHHHHHHHHHHH
Confidence 310 11 11100 000011111111 122222333321
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.|||++. ++.+.|+||..+..
T Consensus 204 --------~givHrDlkp~Nill~~-~~~~~l~DfG~a~~ 234 (392)
T PHA03207 204 --------RGIIHRDVKTENIFLDE-PENAVLGDFGAACK 234 (392)
T ss_pred --------CCccccCCCHHHEEEcC-CCCEEEccCccccc
Confidence 36899999999999975 67899999997743
No 226
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.00 E-value=0.0073 Score=55.93 Aligned_cols=142 Identities=16% Similarity=0.208 Sum_probs=78.0
Q ss_pred EEEecceeeeeEEEEEecC-CCCCCeeEEEEEcCCCCCc-ccchHHHHHHHHHHHhCCCCceEEEEe--CC--c--eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKE-ESGNDVSVTVRLYGPNTDI-VINRQRELQAIKYLSAAGFGAKLLAVF--GN--G--MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~-~~~~~~~~vlRi~~~~~~~-~idr~~E~~~l~~l~~~gl~P~~~~~~--~~--g--~i~e 137 (382)
++.+..|....+|++.... .......+++|........ .-...+|.++++.+...++ +++++.+ .+ . +|++
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~~~lv~e 87 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNI-VKYKGVCYSAGRRNLRLVME 87 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCe-eEEEEEEccCCCCceEEEEE
Confidence 4667778788999987531 1112347888887554322 1123567777776654444 3444432 22 2 5899
Q ss_pred eecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHH
Q 016788 138 FINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVE 217 (382)
Q Consensus 138 ~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (382)
|++|.+|..- . +... .+..+.....+. ..+...+..
T Consensus 88 ~~~~~~L~~~-------l----------~~~~-----~~l~~~~~~~~~----------------------~~l~~aL~~ 123 (284)
T cd05081 88 YLPYGSLRDY-------L----------QKHR-----ERLDHRKLLLYA----------------------SQICKGMEY 123 (284)
T ss_pred ecCCCCHHHH-------H----------HhcC-----cCCCHHHHHHHH----------------------HHHHHHHHH
Confidence 9988655311 1 1100 000011111111 112222333
Q ss_pred HHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 218 LKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 218 l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
|. ...++|+|++|.||++++ ++.+.|+||..+..-
T Consensus 124 LH--------~~~i~H~dlkp~nili~~-~~~~~l~dfg~~~~~ 158 (284)
T cd05081 124 LG--------SKRYVHRDLATRNILVES-ENRVKIGDFGLTKVL 158 (284)
T ss_pred HH--------HCCceeccCCHhhEEECC-CCeEEECCCcccccc
Confidence 32 125899999999999975 678999999977643
No 227
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.00 E-value=0.0051 Score=56.09 Aligned_cols=137 Identities=21% Similarity=0.260 Sum_probs=75.9
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC-cccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEeecC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD-IVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSFINA 141 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~-~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~i~G 141 (382)
+.+..|....+|++...++ ..+.+|+...... ...+...|..+++.+...++ .++++.+..+ .|+||++|
T Consensus 12 ~~ig~g~~~~vy~~~~~~~----~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~~ 86 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNR----VRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHL-ISLFAVCSVGEPVYIITELMEK 86 (261)
T ss_pred hhhccCCCccEEEeEecCC----CcEEEEeccccchhhHHHHHHHHHHHhcCCCcch-hheeeeEecCCCeEEEEeeccc
Confidence 4566677789999887664 3688888754332 12233556666666643333 3445444322 68999988
Q ss_pred CcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHH
Q 016788 142 RTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKEL 221 (382)
Q Consensus 142 ~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 221 (382)
.++..- +. ... . .+..+..+..++ ..+...+..|.
T Consensus 87 ~~L~~~--------------~~---~~~--~--~~~~~~~~~~~~----------------------~~i~~al~~lH-- 121 (261)
T cd05148 87 GSLLAF--------------LR---SPE--G--QVLPVASLIDMA----------------------CQVAEGMAYLE-- 121 (261)
T ss_pred CCHHHH--------------Hh---cCC--C--CCCCHHHHHHHH----------------------HHHHHHHHHHH--
Confidence 654310 10 000 0 010111111111 12222232232
Q ss_pred hcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 222 AGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 222 ~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||++++ ++.+.+.||+.+..
T Consensus 122 ------~~~i~h~dl~~~nilv~~-~~~~kl~d~g~~~~ 153 (261)
T cd05148 122 ------EQNSIHRDLAARNILVGE-DLVCKVADFGLARL 153 (261)
T ss_pred ------HCCeeccccCcceEEEcC-CceEEEccccchhh
Confidence 125899999999999975 67899999998864
No 228
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=96.99 E-value=0.011 Score=56.53 Aligned_cols=29 Identities=24% Similarity=0.407 Sum_probs=25.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.|||++. ++.+.|+||..+.
T Consensus 122 ~iiHrDlkp~Nili~~-~~~~kL~DfG~a~ 150 (332)
T cd05623 122 HYVHRDIKPDNILMDM-NGHIRLADFGSCL 150 (332)
T ss_pred CeEecCCCHHHEEECC-CCCEEEeecchhe
Confidence 5899999999999974 6789999999763
No 229
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=96.97 E-value=0.0055 Score=57.05 Aligned_cols=29 Identities=24% Similarity=0.453 Sum_probs=25.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||+.+.
T Consensus 135 ~i~H~dl~p~Nil~~~-~~~~~l~d~g~~~ 163 (285)
T cd06648 135 GVIHRDIKSDSILLTS-DGRVKLSDFGFCA 163 (285)
T ss_pred CeecCCCChhhEEEcC-CCcEEEcccccch
Confidence 5899999999999975 6789999998654
No 230
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=96.97 E-value=0.019 Score=53.19 Aligned_cols=30 Identities=30% Similarity=0.452 Sum_probs=26.2
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 128 ~ivH~dikp~Nili~~-~~~~kl~dfg~~~~ 157 (288)
T cd07863 128 CIVHRDLKPENILVTS-GGQVKLADFGLARI 157 (288)
T ss_pred CeecCCCCHHHEEECC-CCCEEECccCcccc
Confidence 5899999999999975 67899999987754
No 231
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=96.97 E-value=0.012 Score=54.26 Aligned_cols=29 Identities=31% Similarity=0.409 Sum_probs=25.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 139 ~~vH~dlkp~Nil~~~-~~~~~l~dfg~~~ 167 (277)
T cd05062 139 KFVHRDLAARNCMVAE-DFTVKIGDFGMTR 167 (277)
T ss_pred CcccCCcchheEEEcC-CCCEEECCCCCcc
Confidence 5899999999999985 6789999998765
No 232
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=96.96 E-value=0.0051 Score=56.99 Aligned_cols=31 Identities=19% Similarity=0.382 Sum_probs=26.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
.++|+|++|.||++++ ++.+.+.||+.+...
T Consensus 127 ~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~~ 157 (283)
T cd05080 127 HYIHRDLAARNVLLDN-DRLVKIGDFGLAKAV 157 (283)
T ss_pred CeeccccChheEEEcC-CCcEEEeeccccccc
Confidence 6899999999999975 678999999987653
No 233
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=96.96 E-value=0.006 Score=56.41 Aligned_cols=138 Identities=18% Similarity=0.315 Sum_probs=75.2
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--ccc-chHHHHHHHHHHHhCCCCceEEEEeCC--c--eEEEe
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVI-NRQRELQAIKYLSAAGFGAKLLAVFGN--G--MVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~i-dr~~E~~~l~~l~~~gl~P~~~~~~~~--g--~i~e~ 138 (382)
+..+..|..+.+|++..... ...+++|++..... ... ...+|..+++.+...++ .++++.+.. . .|+||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRET---GQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNL-VNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred eeeecccCCeEEEEEEECCC---CcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCE-eeeeeEEeeCCEEEEEEec
Confidence 35667787889999876532 24788887743221 111 12457777766643333 334444322 2 58899
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++|..+.. + + .. +. ..+ +..+..++ .++.+.+..|
T Consensus 82 ~~~~~l~~-----------~---~---~~---~~-~~~--~~~~~~~~----------------------~ql~~~l~~L 116 (286)
T cd07847 82 CDHTVLNE-----------L---E---KN---PR-GVP--EHLIKKII----------------------WQTLQAVNFC 116 (286)
T ss_pred cCccHHHH-----------H---H---hC---CC-CCC--HHHHHHHH----------------------HHHHHHHHHH
Confidence 88743321 0 0 00 00 001 11111111 1222233333
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
.+ ..++|+|++|.||++++ ++.+.|+||..+..-
T Consensus 117 H~--------~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~ 150 (286)
T cd07847 117 HK--------HNCIHRDVKPENILITK-QGQIKLCDFGFARIL 150 (286)
T ss_pred HH--------CCceecCCChhhEEEcC-CCcEEECccccceec
Confidence 22 35789999999999975 678999999987653
No 234
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=96.96 E-value=0.0078 Score=55.19 Aligned_cols=31 Identities=29% Similarity=0.501 Sum_probs=26.9
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|+++.||++++ ++.+.++||..+..
T Consensus 133 ~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~~ 163 (269)
T cd08528 133 KRIVHRDLTPNNIMLGE-DDKVTITDFGLAKQ 163 (269)
T ss_pred CceeecCCCHHHEEECC-CCcEEEecccceee
Confidence 46899999999999975 67899999998765
No 235
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=96.96 E-value=0.026 Score=51.17 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|||++|.||++++ ++.+.++||..+..
T Consensus 122 ~i~H~di~p~nil~~~-~~~~~l~df~~~~~ 151 (257)
T cd08223 122 HILHRDLKTQNVFLTR-TNIIKVGDLGIARV 151 (257)
T ss_pred CeeccCCCchhEEEec-CCcEEEecccceEE
Confidence 6899999999999975 67899999997754
No 236
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=96.95 E-value=0.0037 Score=56.73 Aligned_cols=30 Identities=27% Similarity=0.380 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 122 ~i~H~dl~~~ni~~~~-~~~~kl~d~~~~~~ 151 (258)
T cd06632 122 NTVHRDIKGANILVDT-NGVVKLADFGMAKQ 151 (258)
T ss_pred CcccCCCCHHHEEECC-CCCEEEccCcccee
Confidence 5899999999999975 67899999987654
No 237
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=96.95 E-value=0.0068 Score=57.33 Aligned_cols=30 Identities=23% Similarity=0.471 Sum_probs=26.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 129 ~iiH~dlkp~Nill~~-~~~~kl~DfG~a~~ 158 (316)
T cd05108 129 RLVHRDLAARNVLVKT-PQHVKITDFGLAKL 158 (316)
T ss_pred CeeccccchhheEecC-CCcEEEcccccccc
Confidence 5899999999999975 67899999998864
No 238
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=96.95 E-value=0.0097 Score=54.33 Aligned_cols=137 Identities=18% Similarity=0.207 Sum_probs=74.5
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCC----ceEEEeecC
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGN----GMVQSFINA 141 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~----g~i~e~i~G 141 (382)
++.+..|....+|.+...+. ..+.+|..........+..+|..+++.+...++ +++++.+.. .+++||++|
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~----~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRGQ----YDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKL-VQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred eeEecCcccceEEEEEecCC----CcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCe-eeEEEEEccCCCcEEEEEcCCC
Confidence 35677777788998876543 257888765432111122456666665543333 466665532 268898877
Q ss_pred CcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHH
Q 016788 142 RTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKEL 221 (382)
Q Consensus 142 ~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 221 (382)
..+.. .+ +.... +-.+..+..+. .++...+..|.
T Consensus 84 ~~l~~--------------~i---~~~~~-----~~~~~~~~~~~----------------------~~i~~~l~~lH-- 117 (256)
T cd05113 84 GCLLN--------------YL---REHGK-----RFQPSQLLEMC----------------------KDVCEGMAYLE-- 117 (256)
T ss_pred CcHHH--------------HH---HhcCC-----CCCHHHHHHHH----------------------HHHHHHHHHHH--
Confidence 54321 01 11000 00111111111 11222232222
Q ss_pred hcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 222 AGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 222 ~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|+||++++ ++.+.++||+.+..
T Consensus 118 ------~~~i~H~dl~p~nili~~-~~~~kl~d~g~~~~ 149 (256)
T cd05113 118 ------SKQFIHRDLAARNCLVDD-QGCVKVSDFGLSRY 149 (256)
T ss_pred ------hCCeeccccCcceEEEcC-CCCEEECCCcccee
Confidence 235899999999999975 67899999987653
No 239
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=96.94 E-value=0.013 Score=53.60 Aligned_cols=142 Identities=13% Similarity=0.203 Sum_probs=76.3
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEee
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSFI 139 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~i 139 (382)
.+.|+.|....+|+............+.+|+....... ..+..+|..+++.+...++ +++++... ++ .+++|+
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~iv~e~~ 87 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNI-IRLEGVVTKSRPVMIITEYM 87 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCc-ceEeEEEecCCceEEEEEcC
Confidence 35667777789999876533212236778876543211 1122346666655543333 44555443 22 588999
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
+|.++..- .. + |.. .-.+..+..++ ..+...+..|.
T Consensus 88 ~~~~L~~~-------~~-------~-~~~-------~~~~~~~~~~~----------------------~~l~~~l~~Lh 123 (266)
T cd05033 88 ENGSLDKF-------LR-------E-NDG-------KFTVGQLVGML----------------------RGIASGMKYLS 123 (266)
T ss_pred CCCCHHHH-------HH-------h-ccC-------CCCHHHHHHHH----------------------HHHHHHHHHHH
Confidence 88654310 00 0 100 00111111111 11222222232
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
+ ..++|+|++|.||++++ ++.+.++||+++..-
T Consensus 124 ~--------~~i~H~di~p~nili~~-~~~~~l~dfg~~~~~ 156 (266)
T cd05033 124 E--------MNYVHRDLAARNILVNS-NLVCKVSDFGLSRRL 156 (266)
T ss_pred h--------CCcccCCCCcceEEEcC-CCCEEECccchhhcc
Confidence 1 35899999999999975 678999999877653
No 240
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=96.94 E-value=0.0068 Score=60.06 Aligned_cols=146 Identities=16% Similarity=0.243 Sum_probs=85.0
Q ss_pred CCeEE-EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC---C-cccchHHHHHHHHHHHhCCCCceEEEEeCCc---
Q 016788 62 SRFSV-DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT---D-IVINRQRELQAIKYLSAAGFGAKLLAVFGNG--- 133 (382)
Q Consensus 62 ~~~~i-~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~---~-~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g--- 133 (382)
.++.+ +.+..|....||+.+.... .+.|-+||-.+.- + ..-....|..+|..|+.+--.-+++++|.+-
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t---~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKAT---GKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred hhcchhheeccccceeEEEeeecCC---CceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 34544 3557788889998876543 2467777764321 1 1112246788899998543335888887543
Q ss_pred -eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHH
Q 016788 134 -MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQ 212 (382)
Q Consensus 134 -~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (382)
.|.+|.++-.| ...|.++-+.+ ..+ .+|+ ..+|.
T Consensus 150 YFvLe~A~nGdl--------------l~~i~K~Gsfd-------e~c---aR~Y---------------------AAeIl 184 (604)
T KOG0592|consen 150 YFVLEYAPNGDL--------------LDLIKKYGSFD-------ETC---ARFY---------------------AAEIL 184 (604)
T ss_pred EEEEEecCCCcH--------------HHHHHHhCcch-------HHH---HHHH---------------------HHHHH
Confidence 47888865311 11122211100 001 1111 12233
Q ss_pred HHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCch
Q 016788 213 KEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 213 ~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~ 264 (382)
..++.| ....++|+|++|.|||+++ ++.+.|-||.-|..-++.
T Consensus 185 dAleyl--------H~~GIIHRDlKPENILLd~-dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 185 DALEYL--------HSNGIIHRDLKPENILLDK-DGHIKITDFGSAKILSPS 227 (604)
T ss_pred HHHHHH--------HhcCceeccCChhheeEcC-CCcEEEeeccccccCChh
Confidence 334333 2358999999999999975 789999999988764443
No 241
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=96.94 E-value=0.0046 Score=62.40 Aligned_cols=37 Identities=27% Similarity=0.306 Sum_probs=29.4
Q ss_pred eeeeccCCCCCceeeeC---CCCCEEEEEeecCCCCCchh
Q 016788 229 VVFSHNDLLSGNIMVND---EQEKLYLIDFEYGSYNYRGY 265 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~---~~~~~~lIDfE~a~~~~~~~ 265 (382)
.++.|+|.|||||++.+ .+..+.+.|+...+.=+..+
T Consensus 320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~ 359 (538)
T KOG1235|consen 320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKT 359 (538)
T ss_pred cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHHH
Confidence 36999999999999984 35679999998877655544
No 242
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=96.94 E-value=0.0077 Score=55.26 Aligned_cols=30 Identities=20% Similarity=0.453 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|+++.||++++ ++.+.++||..+..
T Consensus 131 ~ivh~dl~~~nili~~-~~~~~l~Dfg~~~~ 160 (272)
T cd06637 131 KVIHRDIKGQNVLLTE-NAEVKLVDFGVSAQ 160 (272)
T ss_pred CCccCCCCHHHEEECC-CCCEEEccCCCcee
Confidence 5899999999999975 67899999997753
No 243
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=96.94 E-value=0.0035 Score=57.96 Aligned_cols=74 Identities=11% Similarity=0.107 Sum_probs=43.5
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcc-cchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEeecC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIV-INRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSFINA 141 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~-idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~i~G 141 (382)
..+..|....+|++..... ...+++|+........ -+...|..+++.+.. .-.+++++.+. ++ +|+||++|
T Consensus 11 ~~l~~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (280)
T cd06611 11 GELGDGAFGKVYKAQHKET---GLFAAAKIIQIESEEELEDFMVEIDILSECKH-PNIVGLYEAYFYENKLWILIEFCDG 86 (280)
T ss_pred HHhcCCCCceEEEEEEcCC---CcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCC-CceeEEEEEEecCCeEEEEeeccCC
Confidence 3456677788999977532 2478888875433221 123456666666652 22355665543 22 68999988
Q ss_pred CcC
Q 016788 142 RTL 144 (382)
Q Consensus 142 ~~l 144 (382)
..+
T Consensus 87 ~~L 89 (280)
T cd06611 87 GAL 89 (280)
T ss_pred CcH
Confidence 655
No 244
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=96.94 E-value=0.012 Score=54.42 Aligned_cols=139 Identities=17% Similarity=0.220 Sum_probs=76.0
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeC------C----ceEE
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFG------N----GMVQ 136 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~------~----g~i~ 136 (382)
+.+..|....+|++..... ...+.+|+.............|..+++.+..+....++++.+. . .+++
T Consensus 22 ~~lg~g~~~~v~~~~~~~~---~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~ 98 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKT---GQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVM 98 (282)
T ss_pred eeeccCCCeEEEEEEEcCC---CcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEE
Confidence 5667777889999877532 2368888875432222223456666666654433345554431 1 1588
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
||++|..+.. ... . +. ....+ ...+..+ ..++...+.
T Consensus 99 e~~~~~~L~~-------~~~-------~-~~----~~~~~--~~~~~~~----------------------~~qi~~al~ 135 (282)
T cd06636 99 EFCGAGSVTD-------LVK-------N-TK----GNALK--EDWIAYI----------------------CREILRGLA 135 (282)
T ss_pred EeCCCCcHHH-------HHH-------H-cc----CCCCC--HHHHHHH----------------------HHHHHHHHH
Confidence 9998765431 011 0 00 00001 0000001 112222333
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.+. ...++|+|+++.||++++ ++.+.|+||..+..
T Consensus 136 ~LH--------~~~ivH~dl~~~nili~~-~~~~~l~dfg~~~~ 170 (282)
T cd06636 136 HLH--------AHKVIHRDIKGQNVLLTE-NAEVKLVDFGVSAQ 170 (282)
T ss_pred HHH--------HCCcccCCCCHHHEEECC-CCCEEEeeCcchhh
Confidence 332 136899999999999975 67899999997653
No 245
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=96.93 E-value=0.0042 Score=58.14 Aligned_cols=29 Identities=24% Similarity=0.452 Sum_probs=25.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||+++. ++.+.++||+.+.
T Consensus 136 givH~dl~p~Nilv~~-~~~~~l~dfg~~~ 164 (292)
T cd06657 136 GVIHRDIKSDSILLTH-DGRVKLSDFGFCA 164 (292)
T ss_pred CeecCCCCHHHEEECC-CCCEEEcccccce
Confidence 5899999999999975 6789999999764
No 246
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=96.93 E-value=0.018 Score=53.69 Aligned_cols=72 Identities=13% Similarity=0.220 Sum_probs=42.9
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC--Cc-ccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEe
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT--DI-VINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~--~~-~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~ 138 (382)
...|..|....+|++..... ...+++|...... .. .-...+|..+++.+...+ .+++++.+.++ +|+||
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~ 82 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVT---NETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN-IVRLQDVVHSEKRLYLVFEY 82 (294)
T ss_pred EEEecCCCCEEEEEEEecCC---CcEEEEEehhhccccccchHHHHHHHHHHHhccCCC-EeeEEEEEecCCeEEEEEec
Confidence 46777788889999876532 2478898874321 11 112346777777764333 24566554322 58888
Q ss_pred ecC
Q 016788 139 INA 141 (382)
Q Consensus 139 i~G 141 (382)
+++
T Consensus 83 ~~~ 85 (294)
T PLN00009 83 LDL 85 (294)
T ss_pred ccc
Confidence 754
No 247
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=96.93 E-value=0.014 Score=53.80 Aligned_cols=30 Identities=27% Similarity=0.533 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 124 ~i~h~dlkp~nil~~~-~~~~kl~dfg~~~~ 153 (283)
T cd06617 124 SVIHRDVKPSNVLINR-NGQVKLCDFGISGY 153 (283)
T ss_pred CeecCCCCHHHEEECC-CCCEEEeecccccc
Confidence 6899999999999975 67899999987653
No 248
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=96.93 E-value=0.0036 Score=57.20 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=27.2
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
..++|+|+++.||++++ ++.+.++||+.+...
T Consensus 112 ~~~~h~dl~~~nilv~~-~~~~~l~df~~~~~~ 143 (262)
T cd05572 112 RGIIYRDLKPENLLLDS-NGYVKLVDFGFAKKL 143 (262)
T ss_pred CCcccCCCCHHHEEEcC-CCCEEEeeCCccccc
Confidence 46899999999999975 678999999977643
No 249
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.91 E-value=0.0034 Score=58.21 Aligned_cols=30 Identities=27% Similarity=0.408 Sum_probs=26.2
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..++|+|++|.||+++. ++.+.++||..+.
T Consensus 122 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~ 151 (286)
T cd06622 122 HNIIHRDVKPTNVLVNG-NGQVKLCDFGVSG 151 (286)
T ss_pred CCEeeCCCCHHHEEECC-CCCEEEeecCCcc
Confidence 36899999999999975 6789999999764
No 250
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=96.91 E-value=0.0085 Score=55.04 Aligned_cols=31 Identities=23% Similarity=0.317 Sum_probs=27.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
.++|+|++++||++++ ++.+.++||..+...
T Consensus 128 ~i~H~dl~~~nil~~~-~~~~~l~d~~~~~~~ 158 (272)
T cd06629 128 GILHRDLKADNLLVDA-DGICKISDFGISKKS 158 (272)
T ss_pred CeeecCCChhhEEEcC-CCeEEEeeccccccc
Confidence 5899999999999975 678999999988654
No 251
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=96.91 E-value=0.0073 Score=57.99 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=25.8
Q ss_pred eeeeccCCCCCceeeeCCC--CCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQ--EKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~--~~~~lIDfE~a~~ 260 (382)
..+||+|++|.|||+..+. -.+.|=||..|-.
T Consensus 295 ~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 295 QGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred cCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 4899999999999997431 3478999998765
No 252
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=96.90 E-value=0.0078 Score=55.49 Aligned_cols=73 Identities=19% Similarity=0.252 Sum_probs=42.9
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC--CcccchHHHHHHHHHHHhCCCCceEEEEeC-C--c---eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT--DIVINRQRELQAIKYLSAAGFGAKLLAVFG-N--G---MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~--~~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~--g---~i~e 137 (382)
+..+..|..+.+|++..... ...+.+|+..... ........|...+..+.++.-.+++++.+. + + +|+|
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~---~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKT---GKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred EeeccccccceEEEEEEcCC---CcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 45677777789999986532 2368888875431 112233456666666654433355665532 2 3 5888
Q ss_pred eecC
Q 016788 138 FINA 141 (382)
Q Consensus 138 ~i~G 141 (382)
|.+|
T Consensus 81 ~~~~ 84 (282)
T cd07831 81 LMDM 84 (282)
T ss_pred cCCc
Confidence 8865
No 253
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=96.90 E-value=0.0048 Score=56.84 Aligned_cols=135 Identities=16% Similarity=0.223 Sum_probs=74.6
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC--CcccchHHHHHHHHHHHhCCCCceEEEEe--CCc--eEEEeec
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT--DIVINRQRELQAIKYLSAAGFGAKLLAVF--GNG--MVQSFIN 140 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~--~~~idr~~E~~~l~~l~~~gl~P~~~~~~--~~g--~i~e~i~ 140 (382)
..+..|..+.+|++..... ...+++|+..... .......+|..+++.+...++. ++++.+ ... +|++|++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~~v~e~~~ 82 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRT---NQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT-KYYGSFLKGSKLWIIMEYCG 82 (274)
T ss_pred hhhcCCCCeEEEEEEECCC---CeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCee-eeeEEEEECCeEEEEEEeeC
Confidence 3455677789999876532 2478899875432 1122335677777776644443 333333 222 5889998
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|.++.. . ++.... + +..+..++ ..+...+..+.
T Consensus 83 ~~~L~~--------------~---~~~~~~-----~--~~~~~~~~----------------------~ql~~~l~~lh- 115 (274)
T cd06609 83 GGSCLD--------------L---LKPGKL-----D--ETYIAFIL----------------------REVLLGLEYLH- 115 (274)
T ss_pred CCcHHH--------------H---HhhcCC-----C--HHHHHHHH----------------------HHHHHHHHHHH-
Confidence 865421 0 111010 1 11111111 11222222221
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||++++ ++.+.++||..+..
T Consensus 116 -------~~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~ 147 (274)
T cd06609 116 -------EEGKIHRDIKAANILLSE-EGDVKLADFGVSGQ 147 (274)
T ss_pred -------hCCcccCCCCHHHEEECC-CCCEEEccccccee
Confidence 135799999999999975 67899999986644
No 254
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=96.90 E-value=0.0064 Score=56.82 Aligned_cols=30 Identities=27% Similarity=0.426 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||..+..
T Consensus 150 ~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~ 179 (296)
T cd05095 150 NFVHRDLATRNCLVGK-NYTIKIADFGMSRN 179 (296)
T ss_pred CeecccCChheEEEcC-CCCEEeccCccccc
Confidence 5899999999999975 67899999997753
No 255
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=96.89 E-value=0.0095 Score=55.04 Aligned_cols=138 Identities=20% Similarity=0.313 Sum_probs=76.2
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC--Cc-ccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEe
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT--DI-VINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~--~~-~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~ 138 (382)
...|+.|..+.+|++..... +..+++|+..... .. ..+..+|..+++.+....+ ++++..+..+ .|++|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~---~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRET---GETVALKKVALRRLEGGIPNQALREIKALQACQHPYV-VKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred EeecccCCCcEEEEEEECCC---CceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCC-cceeeEEecCCeeEEEecc
Confidence 35677788889999886432 2378888875432 11 1234567777766653222 4555554322 58888
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
+ |.++.. .+ +... .+-....+..++ .++...+..+
T Consensus 81 ~-~~~L~~--------------~~---~~~~-----~~~~~~~~~~~~----------------------~~i~~~l~~l 115 (286)
T cd07832 81 M-PSDLSE--------------VL---RDEE-----RPLPEAQVKSYM----------------------RMLLKGVAYM 115 (286)
T ss_pred c-CCCHHH--------------HH---HhcC-----CCCCHHHHHHHH----------------------HHHHHHHHHH
Confidence 8 654421 01 1100 010011111111 1222223223
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
. ...++|+|++|.||++++ ++.+.++||+.+..-
T Consensus 116 H--------~~~i~H~dl~p~ni~~~~-~~~~~l~dfg~~~~~ 149 (286)
T cd07832 116 H--------ANGIMHRDLKPANLLISA-DGVLKIADFGLARLF 149 (286)
T ss_pred H--------HCCeecCCcCHHHEEEcC-CCcEEEeeeeecccc
Confidence 2 125899999999999975 678999999977653
No 256
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=96.89 E-value=0.0069 Score=55.76 Aligned_cols=30 Identities=30% Similarity=0.436 Sum_probs=26.1
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..++|+|++|.||++++ ++.+.++||..+.
T Consensus 131 ~~i~H~dikp~nili~~-~~~~kl~dfgl~~ 160 (270)
T cd05047 131 KQFIHRDLAARNILVGE-NYVAKIADFGLSR 160 (270)
T ss_pred CCEeecccccceEEEcC-CCeEEECCCCCcc
Confidence 47899999999999975 6789999999764
No 257
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.88 E-value=0.012 Score=55.43 Aligned_cols=80 Identities=11% Similarity=0.153 Sum_probs=47.1
Q ss_pred EEEEecceeeeeEEEEEecCCC----CCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---e
Q 016788 65 SVDTVSGGITNLLLKVTVKEES----GNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---M 134 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~----~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~ 134 (382)
-...|..|....+|++...+.. .....+++|+...... .......|..+++.+.++.-.+++++.+. ++ +
T Consensus 22 i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (307)
T cd05098 22 LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 101 (307)
T ss_pred EeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 3467778878899988753311 0123588888865321 12233457777777755443456665543 22 5
Q ss_pred EEEeecCCcC
Q 016788 135 VQSFINARTL 144 (382)
Q Consensus 135 i~e~i~G~~l 144 (382)
|++|++|..|
T Consensus 102 v~e~~~~~~L 111 (307)
T cd05098 102 IVEYASKGNL 111 (307)
T ss_pred EEecCCCCcH
Confidence 8899877544
No 258
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=96.88 E-value=0.0054 Score=56.79 Aligned_cols=137 Identities=19% Similarity=0.277 Sum_probs=74.7
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc-ccchHHHHHHHHHHHhCCCCceEEEEe--CCc--eEEEeecC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI-VINRQRELQAIKYLSAAGFGAKLLAVF--GNG--MVQSFINA 141 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~-~idr~~E~~~l~~l~~~gl~P~~~~~~--~~g--~i~e~i~G 141 (382)
..|..|....+|++..... ...+.+|........ .....+|..+++.+...++ +++++.+ .+. .|++|++|
T Consensus 11 ~~lg~g~~g~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-i~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 11 GELGDGAFGKVYKAQNKET---GVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI-VKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred hhcccCCCeEEEEEEECCC---CeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCe-eeEEEEEeeCCEEEEEEEecCC
Confidence 3466677778999876543 135677776543221 2223456666666644333 3455443 222 58999987
Q ss_pred CcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHH
Q 016788 142 RTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKEL 221 (382)
Q Consensus 142 ~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 221 (382)
..+... ++... .+-.+..+..+. ..+.+.+..|.+
T Consensus 87 ~~l~~~-----------------~~~~~-----~~l~~~~~~~~~----------------------~qi~~~L~~LH~- 121 (282)
T cd06643 87 GAVDAV-----------------MLELE-----RPLTEPQIRVVC----------------------KQTLEALNYLHE- 121 (282)
T ss_pred CcHHHH-----------------HHhcC-----CCCCHHHHHHHH----------------------HHHHHHHHHHHH-
Confidence 654210 11100 011111111111 112222333321
Q ss_pred hcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 222 AGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 222 ~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.||++++ ++.+.++||..+..
T Consensus 122 -------~~i~H~dlkp~nili~~-~~~~kl~dfg~~~~ 152 (282)
T cd06643 122 -------NKIIHRDLKAGNILFTL-DGDIKLADFGVSAK 152 (282)
T ss_pred -------CCeeecCCCcccEEEcc-CCCEEEcccccccc
Confidence 26899999999999975 67899999997754
No 259
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=96.88 E-value=0.0048 Score=57.13 Aligned_cols=140 Identities=18% Similarity=0.268 Sum_probs=77.4
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC--C-cccchHHHHHHHHHHHhCCCCceEEEEeC--Cc--eEEEe
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT--D-IVINRQRELQAIKYLSAAGFGAKLLAVFG--NG--MVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~--~-~~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g--~i~e~ 138 (382)
+..|..|....+|++...+. +..+++|++.... . ..-...+|.++++.+...++ +++++.+. +. ++++|
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~---~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKAT---GEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENI-VNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred EEEecccCCeeEEEEEeCCC---CcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCe-eehhheEEECCEEEEEEec
Confidence 35566677778899876543 2478999875421 1 11233577888877764443 34444432 22 58899
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++|..+.. + +.+ . . +-....+... ...+...+..|
T Consensus 82 ~~~~~l~~-----------~---~~~----~--~---~~~~~~~~~~----------------------~~~i~~~l~~L 116 (288)
T cd07833 82 VERTLLEL-----------L---EAS----P--G---GLPPDAVRSY----------------------IWQLLQAIAYC 116 (288)
T ss_pred CCCCHHHH-----------H---Hhc----C--C---CCCHHHHHHH----------------------HHHHHHHHHHH
Confidence 88643211 0 000 0 0 0001111111 11122223222
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCc
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYR 263 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~ 263 (382)
. ...++|+|+++.||++++ ++.+.|.||+.+..-..
T Consensus 117 H--------~~~i~H~dl~~~ni~~~~-~~~~kl~d~g~~~~~~~ 152 (288)
T cd07833 117 H--------SHNIIHRDIKPENILVSE-SGVLKLCDFGFARALRA 152 (288)
T ss_pred H--------HCCeecCCCCHHHeEECC-CCCEEEEeeecccccCC
Confidence 2 125899999999999975 68899999998766443
No 260
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=96.86 E-value=0.013 Score=53.64 Aligned_cols=30 Identities=23% Similarity=0.410 Sum_probs=25.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|.||..+..
T Consensus 126 ~ivH~di~p~nil~~~-~~~~~l~dfg~~~~ 155 (267)
T cd06628 126 GIIHRDIKGANILVDN-KGGIKISDFGISKK 155 (267)
T ss_pred CcccccCCHHHEEEcC-CCCEEecccCCCcc
Confidence 5799999999999975 67899999987653
No 261
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=96.86 E-value=0.015 Score=56.66 Aligned_cols=78 Identities=19% Similarity=0.262 Sum_probs=46.0
Q ss_pred EEecceeeeeEEEEEecCC--CCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEe
Q 016788 67 DTVSGGITNLLLKVTVKEE--SGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSF 138 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~--~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~ 138 (382)
+.|..|....||++..... ......+.+|+....... .-...+|..++..+..+.-..++++.+..+ +|+||
T Consensus 41 ~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 120 (375)
T cd05104 41 KTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEY 120 (375)
T ss_pred heecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehh
Confidence 5677787889999864211 112236778887543211 112246877777775443335666665332 68999
Q ss_pred ecCCcC
Q 016788 139 INARTL 144 (382)
Q Consensus 139 i~G~~l 144 (382)
++|..|
T Consensus 121 ~~~g~L 126 (375)
T cd05104 121 CCYGDL 126 (375)
T ss_pred ccCCcH
Confidence 988654
No 262
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=96.85 E-value=0.007 Score=55.60 Aligned_cols=29 Identities=21% Similarity=0.314 Sum_probs=25.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 120 ~i~H~dlkp~nil~~~-~~~~kL~dfg~~~ 148 (269)
T cd05087 120 NFIHSDLALRNCLLTA-DLTVKIGDYGLSH 148 (269)
T ss_pred CEeccccCcceEEEcC-CCcEEECCccccc
Confidence 5899999999999975 6789999998774
No 263
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.85 E-value=0.014 Score=56.73 Aligned_cols=34 Identities=26% Similarity=0.375 Sum_probs=29.7
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
..++|+||++.|||++.+.+.+.|+||+++...+
T Consensus 139 ~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 139 RGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred CCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 4899999999999998633789999999998876
No 264
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.84 E-value=0.0058 Score=59.13 Aligned_cols=30 Identities=30% Similarity=0.429 Sum_probs=26.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 146 ~ivH~Dlkp~NIll~~-~~~~kL~DfG~a~~ 175 (364)
T cd07875 146 GIIHRDLKPSNIVVKS-DCTLKILDFGLART 175 (364)
T ss_pred CeecCCCCHHHEEECC-CCcEEEEeCCCccc
Confidence 6899999999999975 67899999998754
No 265
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=96.84 E-value=0.02 Score=52.73 Aligned_cols=133 Identities=14% Similarity=0.165 Sum_probs=72.8
Q ss_pred EecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEeecCCc
Q 016788 68 TVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSFINART 143 (382)
Q Consensus 68 ~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~i~G~~ 143 (382)
.+..|....+|++..... ...+++|+.....- ...|......+.++.-.+++++.+. +. .|+||++|.+
T Consensus 23 ~lg~g~~g~v~~~~~~~~---~~~~~~k~~~~~~~----~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 95 (267)
T PHA03390 23 KLIDGKFGKVSVLKHKPT---QKLFVQKIIKAKNF----NAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGD 95 (267)
T ss_pred eecCCCceEEEEEEEcCC---CcEEEEEEEehhhc----chhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCc
Confidence 367888889999876543 24788898754311 1124433333443333456666542 22 5899998764
Q ss_pred CCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhc
Q 016788 144 LTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAG 223 (382)
Q Consensus 144 l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 223 (382)
|.. .+. ... +-.+..+..++ .++...+..+.
T Consensus 96 L~~--------------~l~---~~~------~l~~~~~~~~~----------------------~qi~~~l~~lH---- 126 (267)
T PHA03390 96 LFD--------------LLK---KEG------KLSEAEVKKII----------------------RQLVEALNDLH---- 126 (267)
T ss_pred HHH--------------HHH---hcC------CCCHHHHHHHH----------------------HHHHHHHHHHH----
Confidence 421 010 000 10111111111 11222222222
Q ss_pred ccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 224 HLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 224 ~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||+++++++.+.++||+.+..
T Consensus 127 ----~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~ 159 (267)
T PHA03390 127 ----KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKI 159 (267)
T ss_pred ----hCCeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence 124899999999999986433899999987643
No 266
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=96.84 E-value=0.025 Score=52.01 Aligned_cols=79 Identities=20% Similarity=0.263 Sum_probs=48.3
Q ss_pred EEEEecceeeeeEEEEEecCCC--CCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCC----ceEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEES--GNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGN----GMVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~--~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~----g~i~ 136 (382)
.++.+..|....+|++...... +....+.+|........ .-...+|.++++.+...++ ++++..+.+ .+++
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~ 87 (275)
T cd05046 9 EITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNV-VRLLGLCREAEPHYMIL 87 (275)
T ss_pred eeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcce-eeeEEEECCCCcceEEE
Confidence 3456777777899998864321 12346788887543322 1233667888877754444 466666533 2689
Q ss_pred EeecCCcC
Q 016788 137 SFINARTL 144 (382)
Q Consensus 137 e~i~G~~l 144 (382)
+|++|.+|
T Consensus 88 e~~~~~~L 95 (275)
T cd05046 88 EYTDLGDL 95 (275)
T ss_pred EecCCCcH
Confidence 99987544
No 267
>PHA03209 serine/threonine kinase US3; Provisional
Probab=96.83 E-value=0.0086 Score=57.90 Aligned_cols=134 Identities=14% Similarity=0.191 Sum_probs=75.3
Q ss_pred eEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEEEee
Q 016788 64 FSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQSFI 139 (382)
Q Consensus 64 ~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~e~i 139 (382)
..+..|..|....+|++..... ...+++|+..... ...|..+++.+...++ +++++.+.. + +|++++
T Consensus 69 ~~~~~lg~G~~g~Vy~~~~~~~---~~~valK~~~~~~-----~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 69 TVIKTLTPGSEGRVFVATKPGQ---PDPVVLKIGQKGT-----TLIEAMLLQNVNHPSV-IRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred EEEEEecCCCCeEEEEEEECCC---CceEEEEeCCccc-----cHHHHHHHHhCCCCCC-cChhheEEeCCeeEEEEEcc
Confidence 3457788888889999987543 2468888754321 2468777777754443 345544322 1 577777
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
.|... . .+. ... .+..+.....+. .++...+..|.
T Consensus 140 ~~~l~-----------~----~l~---~~~-----~~~~~~~~~~i~----------------------~qi~~aL~~LH 174 (357)
T PHA03209 140 SSDLY-----------T----YLT---KRS-----RPLPIDQALIIE----------------------KQILEGLRYLH 174 (357)
T ss_pred CCcHH-----------H----HHH---hcc-----CCCCHHHHHHHH----------------------HHHHHHHHHHH
Confidence 55210 0 010 000 011111111111 11222232232
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
+ ..++|+|++|.|||+++ .+.+.|+||..+..
T Consensus 175 ~--------~~ivHrDlkp~Nill~~-~~~~kl~DfG~a~~ 206 (357)
T PHA03209 175 A--------QRIIHRDVKTENIFIND-VDQVCIGDLGAAQF 206 (357)
T ss_pred H--------CCeecCCCCHHHEEECC-CCCEEEecCccccc
Confidence 1 25899999999999975 67899999998764
No 268
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=96.83 E-value=0.0079 Score=62.50 Aligned_cols=144 Identities=17% Similarity=0.273 Sum_probs=82.6
Q ss_pred CeEE-EEecceeeeeEEEEEecCCCCCCeeEE-EEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeC---------
Q 016788 63 RFSV-DTVSGGITNLLLKVTVKEESGNDVSVT-VRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFG--------- 131 (382)
Q Consensus 63 ~~~i-~~l~gG~tN~~y~v~~~~~~~~~~~~v-lRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~--------- 131 (382)
.++| +.|+.|--..||.+....+. .+|. .|++..+...+-...+|+.+++.|+.+ |.|+.+.+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~---~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh---~nIV~yidss~~~~~~~ 111 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGG---KKYALKRMYVNDEEALNAVKREIDIMKLLSGH---KNIVSYIDSSAINRSSN 111 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCC---ceeeeeeeecCCHHHHHHHHHHHHHHHHhcCC---CceeeEeccccccccCC
Confidence 3444 45666767899999887652 2454 567776544454567999999999865 33343321
Q ss_pred Cc-----eEEEeecCCcCCccccCChHHHHHHHHHH-HHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccc
Q 016788 132 NG-----MVQSFINARTLTPADMRNPKLAAEIAKQL-RRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYET 205 (382)
Q Consensus 132 ~g-----~i~e~i~G~~l~~~~~~~~~~~~~ia~~L-a~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (382)
+| ++|||+.|..| ...| .+++.. +...+..+.
T Consensus 112 ~~~~EvllLmEyC~gg~L--------------vd~mn~Rlq~~-------------------------lte~eVLkI--- 149 (738)
T KOG1989|consen 112 NGVWEVLLLMEYCKGGSL--------------VDFMNTRLQTR-------------------------LTEDEVLKI--- 149 (738)
T ss_pred CceeEEEeehhhccCCcH--------------HHHHHHHHhcc-------------------------CChHHHHHH---
Confidence 22 35677765322 1111 122211 111100000
Q ss_pred cCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCc
Q 016788 206 ISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYR 263 (382)
Q Consensus 206 ~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~ 263 (382)
+.++.+.+..+ +..++-++|+||+..|||+.. ++...|-||.-|+---+
T Consensus 150 --f~dv~~AVa~m------H~~~pPiIHRDLKiENvLls~-~g~~KLCDFGSatt~~~ 198 (738)
T KOG1989|consen 150 --FYDVCEAVAAM------HYLKPPIIHRDLKIENVLLSA-DGNYKLCDFGSATTKIL 198 (738)
T ss_pred --HHHHHHHHHHH------hcCCCccchhhhhhhheEEcC-CCCEEeCcccccccccC
Confidence 12222223222 445667999999999999975 67899999998765433
No 269
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=96.83 E-value=0.011 Score=54.83 Aligned_cols=137 Identities=16% Similarity=0.259 Sum_probs=75.2
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEe--CCc--eEEEeecCC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVF--GNG--MVQSFINAR 142 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~--~~g--~i~e~i~G~ 142 (382)
..+..|....+|++..... ...+++|+........-....|...++.+...++ ++++..+ .+. .|++|++|.
T Consensus 25 ~~l~~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~~~ 100 (286)
T cd06614 25 EKIGEGASGEVYKATDRAT---GKEVAIKKMRLRKQNKELIINEILIMKDCKHPNI-VDYYDSYLVGDELWVVMEYMDGG 100 (286)
T ss_pred HhccCCCCeEEEEEEEccC---CcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCe-eEEEEEEEECCEEEEEEeccCCC
Confidence 4566676778899877532 1378999886543211123456666666654333 3444443 222 588999886
Q ss_pred cCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHh
Q 016788 143 TLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELA 222 (382)
Q Consensus 143 ~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 222 (382)
+|.. ... . |.... + +...... ...+...+..+.
T Consensus 101 ~L~~-------~l~-------~-~~~~l-----~--~~~~~~i----------------------~~~i~~~L~~lH--- 133 (286)
T cd06614 101 SLTD-------IIT-------Q-NFVRM-----N--EPQIAYV----------------------CREVLQGLEYLH--- 133 (286)
T ss_pred cHHH-------HHH-------H-hccCC-----C--HHHHHHH----------------------HHHHHHHHHHHH---
Confidence 5531 111 0 11000 0 1111000 111222222221
Q ss_pred cccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 223 GHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 223 ~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||+++. ++.+.|+||+++..
T Consensus 134 -----~~gi~H~dl~p~ni~i~~-~~~~~l~d~~~~~~ 165 (286)
T cd06614 134 -----SQNVIHRDIKSDNILLSK-DGSVKLADFGFAAQ 165 (286)
T ss_pred -----hCCeeeCCCChhhEEEcC-CCCEEECccchhhh
Confidence 146899999999999975 67899999997654
No 270
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=96.83 E-value=0.0057 Score=56.38 Aligned_cols=32 Identities=28% Similarity=0.323 Sum_probs=27.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
.++|+|++|.||++++ ++.+.++||+.+....
T Consensus 118 ~i~H~dl~p~nili~~-~~~~~l~df~~~~~~~ 149 (283)
T cd05118 118 GILHRDLKPENLLINT-EGVLKLADFGLARSFG 149 (283)
T ss_pred CeeecCcCHHHEEECC-CCcEEEeeeeeeEecC
Confidence 5899999999999975 6789999999875443
No 271
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=96.82 E-value=0.029 Score=52.18 Aligned_cols=29 Identities=31% Similarity=0.383 Sum_probs=25.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 139 ~i~H~dikp~nili~~-~~~~~L~Dfg~~~ 167 (288)
T cd05061 139 KFVHRDLAARNCMVAH-DFTVKIGDFGMTR 167 (288)
T ss_pred CCcCCCCChheEEEcC-CCcEEECcCCccc
Confidence 6899999999999975 6789999998765
No 272
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=96.81 E-value=0.0073 Score=55.30 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 126 ~i~H~dl~p~nil~~~-~~~~~l~Dfg~~~~ 155 (265)
T cd06652 126 MIVHRDIKGANILRDS-VGNVKLGDFGASKR 155 (265)
T ss_pred CEecCCCCHHHEEecC-CCCEEECcCccccc
Confidence 4899999999999975 67899999987764
No 273
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=96.81 E-value=0.0035 Score=59.64 Aligned_cols=29 Identities=28% Similarity=0.390 Sum_probs=25.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 116 giiHrDlkp~Nili~~-~~~~kl~DfG~a~ 144 (325)
T cd05602 116 NIVYRDLKPENILLDS-QGHIVLTDFGLCK 144 (325)
T ss_pred CeEecCCCHHHeEECC-CCCEEEccCCCCc
Confidence 6899999999999975 6789999998764
No 274
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=96.81 E-value=0.0095 Score=55.05 Aligned_cols=30 Identities=23% Similarity=0.464 Sum_probs=25.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++.+ ++.+.|+||..+..
T Consensus 129 ~iiH~dlkp~Nil~~~-~~~~kL~dfG~~~~ 158 (279)
T cd05109 129 RLVHRDLAARNVLVKS-PNHVKITDFGLARL 158 (279)
T ss_pred CeeccccccceEEEcC-CCcEEECCCCceee
Confidence 5899999999999975 67899999987754
No 275
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=96.81 E-value=0.0047 Score=56.50 Aligned_cols=31 Identities=19% Similarity=0.437 Sum_probs=25.8
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||+++.++..+.|+||..+..
T Consensus 123 ~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 123 QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 6899999999999975444689999998754
No 276
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=96.81 E-value=0.016 Score=53.96 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|+.|.||++++ ++.+.++||..+..
T Consensus 122 ~ivH~dlkp~Nil~~~-~~~~~l~Dfg~~~~ 151 (285)
T cd05605 122 RIVYRDLKPENILLDD-YGHIRISDLGLAVE 151 (285)
T ss_pred CcEecCCCHHHEEECC-CCCEEEeeCCCcee
Confidence 5899999999999975 67899999997754
No 277
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.80 E-value=0.013 Score=61.65 Aligned_cols=139 Identities=17% Similarity=0.185 Sum_probs=76.7
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC---c-ccchHHHHHHHHHHHhCCCCceEEEEeC--Cc--eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD---I-VINRQRELQAIKYLSAAGFGAKLLAVFG--NG--MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~---~-~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g--~i~ 136 (382)
.+..|..|....+|++..... ...+.+|+...... . ......|..+++.+....+ .+++..+. +. +|+
T Consensus 8 i~~~LG~G~fg~Vy~a~~~~~---~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~I-v~~~~~~~~~~~~~lVm 83 (669)
T cd05610 8 IVKPISRGAFGKVYLGRKKNN---SKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFI-VHLYYSLQSANNVYLVM 83 (669)
T ss_pred EEEEEecCCCeEEEEEEECCC---CcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCc-CeEEEEEEECCEEEEEE
Confidence 356777787889999987632 24788888754211 0 1122455555555543333 34444432 22 689
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
+|++|..|.. .+.+...+ + ...+..++ .++...+.
T Consensus 84 Ey~~g~~L~~--------------li~~~~~l-------~--~~~~~~i~----------------------~qil~aL~ 118 (669)
T cd05610 84 EYLIGGDVKS--------------LLHIYGYF-------D--EEMAVKYI----------------------SEVALALD 118 (669)
T ss_pred eCCCCCCHHH--------------HHHhcCCC-------C--HHHHHHHH----------------------HHHHHHHH
Confidence 9998864421 11111000 0 00011111 12222233
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
.|.. ..++|+|++|.|||++. ++.+.|+||..+...
T Consensus 119 yLH~--------~gIiHrDLKP~NILl~~-~g~vkL~DFGls~~~ 154 (669)
T cd05610 119 YLHR--------HGIIHRDLKPDNMLISN-EGHIKLTDFGLSKVT 154 (669)
T ss_pred HHHh--------CCEEeCCccHHHEEEcC-CCCEEEEeCCCCccc
Confidence 3321 26899999999999975 678999999988643
No 278
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=96.79 E-value=0.0052 Score=59.19 Aligned_cols=30 Identities=30% Similarity=0.429 Sum_probs=26.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 139 givHrDikp~Nill~~-~~~~kl~Dfg~~~~ 168 (355)
T cd07874 139 GIIHRDLKPSNIVVKS-DCTLKILDFGLART 168 (355)
T ss_pred CcccCCCChHHEEECC-CCCEEEeeCccccc
Confidence 6899999999999975 67899999998864
No 279
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.79 E-value=0.011 Score=56.97 Aligned_cols=30 Identities=30% Similarity=0.429 Sum_probs=26.4
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 143 ~ivHrDlkp~NIl~~~-~~~~kl~Dfg~a~~ 172 (359)
T cd07876 143 GIIHRDLKPSNIVVKS-DCTLKILDFGLART 172 (359)
T ss_pred CcccCCCCHHHEEECC-CCCEEEecCCCccc
Confidence 6899999999999975 67899999998754
No 280
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=96.79 E-value=0.058 Score=53.14 Aligned_cols=78 Identities=15% Similarity=0.126 Sum_probs=46.5
Q ss_pred EEecceeeeeEEEEEecCC--CCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEe
Q 016788 67 DTVSGGITNLLLKVTVKEE--SGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSF 138 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~--~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~ 138 (382)
..|..|....||++..... ......+.+|+....... .-...+|..++..+..+.-.+++++.+..+ +|+||
T Consensus 43 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey 122 (400)
T cd05105 43 RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEY 122 (400)
T ss_pred heecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEe
Confidence 5667777789998875321 111235788877543221 112346777777775443345677666432 68999
Q ss_pred ecCCcC
Q 016788 139 INARTL 144 (382)
Q Consensus 139 i~G~~l 144 (382)
++|..|
T Consensus 123 ~~~g~L 128 (400)
T cd05105 123 CFYGDL 128 (400)
T ss_pred cCCCcH
Confidence 988655
No 281
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=96.79 E-value=0.012 Score=54.47 Aligned_cols=29 Identities=17% Similarity=0.327 Sum_probs=25.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 115 ~i~H~di~p~Nil~~~-~~~~~l~dfg~~~ 143 (277)
T cd05577 115 RIVYRDLKPENVLLDD-HGNVRISDLGLAV 143 (277)
T ss_pred CcccCCCCHHHEEECC-CCCEEEccCcchh
Confidence 5799999999999975 6789999998664
No 282
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=96.77 E-value=0.0068 Score=56.67 Aligned_cols=29 Identities=24% Similarity=0.399 Sum_probs=25.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.|+||..+.
T Consensus 135 ~i~H~dl~p~nill~~-~~~~kL~dfg~~~ 163 (296)
T cd06618 135 GVIHRDVKPSNILLDA-SGNVKLCDFGISG 163 (296)
T ss_pred CEecCCCcHHHEEEcC-CCCEEECccccch
Confidence 5899999999999974 6789999998764
No 283
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=96.77 E-value=0.011 Score=53.72 Aligned_cols=141 Identities=15% Similarity=0.217 Sum_probs=76.5
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC---CcccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEe
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT---DIVINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~---~~~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~ 138 (382)
.+.+..|....+|++...... ..+++|...... .......+|..+++.+...++ +++++.+. ++ .|+||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDS---EHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNI-VTFFASFQENGRLFIVMEY 80 (257)
T ss_pred EEEecCCCcceEEEEEEcCCC---ceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCCh-hhhhheeccCCeEEEEEec
Confidence 456777777899998875431 367888764321 111122467777776654443 34444432 22 58999
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++|.++.. .+.+.+.. +..+.....++ ..+.+.+..+
T Consensus 81 ~~~~~L~~--------------~~~~~~~~-------~~~~~~~~~~~----------------------~~l~~~l~~l 117 (257)
T cd08225 81 CDGGDLMK--------------RINRQRGV-------LFSEDQILSWF----------------------VQISLGLKHI 117 (257)
T ss_pred CCCCcHHH--------------HHHhccCC-------CCCHHHHHHHH----------------------HHHHHHHHHH
Confidence 88865521 11111110 00111111111 1122222222
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
. ...++|+|++|.||++++++..+.++||..+..-
T Consensus 118 h--------~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (257)
T cd08225 118 H--------DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQL 152 (257)
T ss_pred H--------HCCcccccCCHHHEEEcCCCCeEEecccccchhc
Confidence 2 2368999999999999764445799999987653
No 284
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=96.77 E-value=0.016 Score=53.19 Aligned_cols=77 Identities=10% Similarity=0.160 Sum_probs=43.4
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEeec
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSFIN 140 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~i~ 140 (382)
+.+..|....+|++...........+.+|+...... .......|..+++.+...++ .+++..+.++ .++||++
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNI-IHLEGVVTKSRPVMIITEFME 88 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCc-ceEEEEECCCCceEEEEecCC
Confidence 556777778999987654321223588888754321 11122456655555543333 4555554332 5889988
Q ss_pred CCcC
Q 016788 141 ARTL 144 (382)
Q Consensus 141 G~~l 144 (382)
|.++
T Consensus 89 ~~~L 92 (269)
T cd05065 89 NGAL 92 (269)
T ss_pred CCcH
Confidence 7644
No 285
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=96.76 E-value=0.017 Score=53.29 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=26.5
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|+||++++ ++.+.++||+.+..
T Consensus 120 ~~i~h~dl~p~Ni~i~~-~~~~~l~dfg~~~~ 150 (277)
T cd06641 120 EKKIHRDIKAANVLLSE-HGEVKLADFGVAGQ 150 (277)
T ss_pred CCeecCCCCHHhEEECC-CCCEEEeeccccee
Confidence 47899999999999975 67899999997643
No 286
>PTZ00284 protein kinase; Provisional
Probab=96.76 E-value=0.02 Score=57.59 Aligned_cols=54 Identities=9% Similarity=0.095 Sum_probs=34.1
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCC
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGF 122 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl 122 (382)
+..|..|....||++..... ...+.+|+........-+...|..+++.+.....
T Consensus 134 ~~~lG~G~fg~V~~a~~~~~---~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~ 187 (467)
T PTZ00284 134 LSLLGEGTFGKVVEAWDRKR---KEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADP 187 (467)
T ss_pred EEEEEeccCEEEEEEEEcCC---CeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCc
Confidence 35677788889999876543 1368888875432222233567888887766543
No 287
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=96.75 E-value=0.027 Score=52.41 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=26.3
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.||++++ ++.+.++||..+..
T Consensus 121 ~~iiH~dikp~Nil~~~-~~~~~l~Dfg~~~~ 151 (285)
T cd05630 121 ERIVYRDLKPENILLDD-HGHIRISDLGLAVH 151 (285)
T ss_pred CCEEeCCCCHHHEEECC-CCCEEEeeccceee
Confidence 36899999999999975 67899999987754
No 288
>PTZ00036 glycogen synthase kinase; Provisional
Probab=96.75 E-value=0.028 Score=56.04 Aligned_cols=30 Identities=27% Similarity=0.482 Sum_probs=25.8
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.+||+|++|.|||++.+++.+.|+||..|.
T Consensus 190 ~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 190 FICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 689999999999997544579999999774
No 289
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=96.74 E-value=0.01 Score=54.97 Aligned_cols=30 Identities=27% Similarity=0.467 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.+.||..+..
T Consensus 144 ~i~H~dlkp~nili~~-~~~~kl~dfg~~~~ 173 (283)
T cd05090 144 FFVHKDLAARNILIGE-QLHVKISDLGLSRE 173 (283)
T ss_pred CeehhccccceEEEcC-CCcEEecccccccc
Confidence 5899999999999975 67799999997754
No 290
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=96.74 E-value=0.009 Score=55.23 Aligned_cols=30 Identities=27% Similarity=0.392 Sum_probs=25.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||+.+..
T Consensus 144 ~i~H~dlkp~Nil~~~-~~~~~L~dfg~~~~ 173 (283)
T cd05048 144 HFVHRDLAARNCLVGE-GLTVKISDFGLSRD 173 (283)
T ss_pred CeeccccccceEEEcC-CCcEEECCCcceee
Confidence 5899999999999975 67899999987653
No 291
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=96.73 E-value=0.02 Score=50.46 Aligned_cols=138 Identities=18% Similarity=0.230 Sum_probs=76.6
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeC--C--ceEEEeec
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFG--N--GMVQSFIN 140 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~i~e~i~ 140 (382)
+.+..|....+|++...+. ...+++|........ .-+..+|...++.+...++ ++++.... + ..+++|++
T Consensus 5 ~~i~~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i-~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGT---GELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNI-VKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred eEeecCCCeEEEEEEEcCC---CcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCh-hhheeeeecCCceEEEEeccC
Confidence 5666777789999988652 137899998754322 2233567777776644333 33443322 2 25888888
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|.++.. .+..... . .+ +.....++ ..+...+..+.
T Consensus 81 ~~~L~~--------------~~~~~~~---~---~~--~~~~~~~~----------------------~~l~~~l~~lh- 115 (225)
T smart00221 81 GGDLFD--------------YLRKKGG---K---LS--EEEARFYL----------------------RQILEALEYLH- 115 (225)
T ss_pred CCCHHH--------------HHHhccc---C---CC--HHHHHHHH----------------------HHHHHHHHHHH-
Confidence 754321 1111000 0 00 11111111 11122222221
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
...++|+|+++.||++++ ++.+.++||+.+..-
T Consensus 116 -------~~~i~h~di~~~ni~v~~-~~~~~l~d~g~~~~~ 148 (225)
T smart00221 116 -------SLGIVHRDLKPENILLGM-DGLVKLADFGLARFI 148 (225)
T ss_pred -------hCCeecCCCCHHHEEEcC-CCCEEEeeCceeeEe
Confidence 128899999999999985 588999999977654
No 292
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=96.72 E-value=0.0099 Score=55.08 Aligned_cols=29 Identities=17% Similarity=0.353 Sum_probs=25.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||+++. ++.+.++||..+.
T Consensus 117 ~i~H~di~p~nili~~-~~~~kl~dfg~~~ 145 (278)
T cd05606 117 FVVYRDLKPANILLDE-HGHVRISDLGLAC 145 (278)
T ss_pred CEEcCCCCHHHEEECC-CCCEEEccCcCcc
Confidence 5899999999999975 6789999999764
No 293
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=96.72 E-value=0.024 Score=51.61 Aligned_cols=140 Identities=16% Similarity=0.231 Sum_probs=75.5
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeC--Cc--eEEEee
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFG--NG--MVQSFI 139 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g--~i~e~i 139 (382)
.+.+..|....+|++...+. ...+++|+...... ..-+..+|...++.+...++ +++++... +. .+++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPN---NEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNV-VKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred eeeecCCCCeEEEEEEEcCC---CcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCE-EEEEEEEeeCCEEEEEEecc
Confidence 35666777789999986542 23688888754321 12233566666666543333 34444432 22 588888
Q ss_pred cCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHH
Q 016788 140 NARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELK 219 (382)
Q Consensus 140 ~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (382)
+|.++.. .+...+. ....+ +..+..++ ..+...+..|.
T Consensus 82 ~~~~l~~--------------~~~~~~~----~~~~~--~~~~~~~~----------------------~ql~~al~~lh 119 (267)
T cd06610 82 SGGSLLD--------------IMKSSYP----RGGLD--EAIIATVL----------------------KEVLKGLEYLH 119 (267)
T ss_pred CCCcHHH--------------HHHHhcc----cCCCC--HHHHHHHH----------------------HHHHHHHHHHH
Confidence 8764421 1111111 00000 11111111 12222232222
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|+.|.||++++ ++.+.|+||.++..
T Consensus 120 --------~~~i~h~~l~p~ni~~~~-~~~~~l~df~~~~~ 151 (267)
T cd06610 120 --------SNGQIHRDIKAGNILLGE-DGSVKIADFGVSAS 151 (267)
T ss_pred --------hCCeecCCCCHHhEEEcC-CCCEEEcccchHHH
Confidence 235799999999999985 67899999987643
No 294
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=96.72 E-value=0.03 Score=51.00 Aligned_cols=30 Identities=20% Similarity=0.402 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||+.+..
T Consensus 126 ~i~h~dl~p~nil~~~-~~~~~l~d~~~~~~ 155 (267)
T cd08224 126 RIMHRDIKPANVFITA-TGVVKLGDLGLGRF 155 (267)
T ss_pred CEecCCcChhhEEECC-CCcEEEeccceeee
Confidence 6899999999999975 67899999987654
No 295
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=96.72 E-value=0.038 Score=51.22 Aligned_cols=30 Identities=30% Similarity=0.442 Sum_probs=26.2
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 130 ~iiH~dlkp~Nil~~~-~~~~kl~Dfg~~~~ 159 (290)
T cd07862 130 RVVHRDLKPQNILVTS-SGQIKLADFGLARI 159 (290)
T ss_pred CeeeCCCCHHHEEEcC-CCCEEEccccceEe
Confidence 5899999999999975 67899999997753
No 296
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=96.72 E-value=0.0076 Score=56.13 Aligned_cols=30 Identities=27% Similarity=0.426 Sum_probs=25.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.+.||..+..
T Consensus 150 ~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~ 179 (296)
T cd05051 150 NFVHRDLATRNCLVGK-NYTIKIADFGMSRN 179 (296)
T ss_pred CccccccchhceeecC-CCceEEccccceee
Confidence 5899999999999975 57899999987653
No 297
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=96.72 E-value=0.0096 Score=58.00 Aligned_cols=79 Identities=16% Similarity=0.177 Sum_probs=46.1
Q ss_pred EEEecceeeeeEEEEEecC--CCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEEE
Q 016788 66 VDTVSGGITNLLLKVTVKE--ESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~--~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~e 137 (382)
.+.|..|....+|++.... ...+...+.+|+...... ..-...+|..+++.+..+.-.+++++.+.. + +|+|
T Consensus 43 ~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~e 122 (374)
T cd05106 43 GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITE 122 (374)
T ss_pred hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHh
Confidence 3566777778899876421 111223688887754321 111224677777777544444566666533 2 5889
Q ss_pred eecCCcC
Q 016788 138 FINARTL 144 (382)
Q Consensus 138 ~i~G~~l 144 (382)
|++|..|
T Consensus 123 y~~~g~L 129 (374)
T cd05106 123 YCCYGDL 129 (374)
T ss_pred hccCCcH
Confidence 9988654
No 298
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=96.72 E-value=0.017 Score=53.67 Aligned_cols=137 Identities=17% Similarity=0.227 Sum_probs=76.3
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEe
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSF 138 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~ 138 (382)
.+..+..|....+|++..... ...+++|........ .....+|..+++.+...++ .+++..+..+ +|+||
T Consensus 9 ~~~~lg~g~~~~vy~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 9 KLDKLGEGSYATVYKGRSKLT---GQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANI-VTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred EEEEEeecCCeEEEEEEEcCC---CcEEEEEEEecccccCCchhHHHHHHHHhhCCCcce-eeEEEEEecCCeEEEEEec
Confidence 446777787788999976532 247888887543211 1122468888887755444 3455444322 58888
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++| .+. ..+. .... +.....+..++ .++.+.+..|
T Consensus 85 ~~~-~L~--------------~~~~---~~~~-----~~~~~~~~~~~----------------------~ql~~al~~l 119 (291)
T cd07844 85 LDT-DLK--------------QYMD---DCGG-----GLSMHNVRLFL----------------------FQLLRGLAYC 119 (291)
T ss_pred CCC-CHH--------------HHHH---hCCC-----CCCHHHHHHHH----------------------HHHHHHHHHH
Confidence 865 221 0111 1000 00011111111 1222223333
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.+ ..++|+|++|.||++++ ++.+.|+||..+.
T Consensus 120 H~--------~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~ 151 (291)
T cd07844 120 HQ--------RRVLHRDLKPQNLLISE-RGELKLADFGLAR 151 (291)
T ss_pred Hh--------CCeecccCCHHHEEEcC-CCCEEECcccccc
Confidence 21 25899999999999975 6789999999764
No 299
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=96.71 E-value=0.0052 Score=57.84 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=27.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
.++|+|++|+||++++ ++.+.+.||..+....
T Consensus 135 ~i~H~dl~p~nIl~~~-~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 135 ERIHRDIKAGNILLTE-PGTVKLADFGSASLVS 166 (307)
T ss_pred CceecCCCcccEEECC-CCCEEEeecCcceecC
Confidence 5799999999999975 6789999999776543
No 300
>PHA03211 serine/threonine kinase US3; Provisional
Probab=96.71 E-value=0.022 Score=57.18 Aligned_cols=133 Identities=18% Similarity=0.167 Sum_probs=74.0
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEe-CCc---eEEEeec
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVF-GNG---MVQSFIN 140 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~-~~g---~i~e~i~ 140 (382)
....|..|....||++..... ...+++|.... ....+|.++++.|...++. ++++.+ .++ +|++++.
T Consensus 173 i~~~Lg~G~~G~Vy~a~~~~~---~~~vavK~~~~-----~~~~~E~~iL~~L~HpnIv-~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 173 IHRALTPGSEGCVFESSHPDY---PQRVVVKAGWY-----ASSVHEARLLRRLSHPAVL-ALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred EEEEEccCCCeEEEEEEECCC---CCEEEEecccc-----cCHHHHHHHHHHCCCCCCC-cEEEEEEECCEEEEEEEccC
Confidence 345677787889999987653 24688885321 1235788888888655543 445443 222 4677665
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|.. .. .+.+ .. .+-.+..+..+. .++...+..|.
T Consensus 244 ~~L-----------~~----~l~~---~~-----~~l~~~~~~~i~----------------------~qi~~aL~yLH- 277 (461)
T PHA03211 244 SDL-----------YT----YLGA---RL-----RPLGLAQVTAVA----------------------RQLLSAIDYIH- 277 (461)
T ss_pred CCH-----------HH----HHHh---cC-----CCCCHHHHHHHH----------------------HHHHHHHHHHH-
Confidence 420 11 1100 00 011122111111 11222222222
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.|||++. ++.+.|+||..+..
T Consensus 278 -------~~gIvHrDLKP~NILl~~-~~~vkL~DFGla~~ 309 (461)
T PHA03211 278 -------GEGIIHRDIKTENVLVNG-PEDICLGDFGAACF 309 (461)
T ss_pred -------HCCEEECcCCHHHEEECC-CCCEEEcccCCcee
Confidence 125899999999999975 67899999998753
No 301
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=96.71 E-value=0.042 Score=50.69 Aligned_cols=73 Identities=14% Similarity=0.207 Sum_probs=44.3
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCC-c---eEEEe
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGN-G---MVQSF 138 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~-g---~i~e~ 138 (382)
.++.|..|....+|+...... +..+++|+....... .-...+|..+++.+...++ ++++..+.. + +|++|
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 4 QLEKLGEGTYATVYKGRNRTT---GEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI-VRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred EeeeeccCCceEEEEEEECCC---CeEEEEEEecccccccchHHHHHHHHHHHhhcCCCE-eeeeeeEeeCCcEEEEEec
Confidence 356777788889999887532 247888876543211 1112467778887754333 556555432 2 58888
Q ss_pred ecC
Q 016788 139 INA 141 (382)
Q Consensus 139 i~G 141 (382)
++|
T Consensus 80 ~~~ 82 (284)
T cd07836 80 MDK 82 (284)
T ss_pred CCc
Confidence 875
No 302
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=96.70 E-value=0.01 Score=53.76 Aligned_cols=73 Identities=15% Similarity=0.228 Sum_probs=44.0
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEeecCC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSFINAR 142 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~i~G~ 142 (382)
+.+..|....+|++..... ...+++|....... .-+..+|..+++.+...++ +++++.+..+ .+++|++|.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~l~~e~~~~~ 83 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKET---GQVVAIKVVPVEED-LQEIIKEISILKQCDSPYI-VKYYGSYFKNTDLWIVMEYCGAG 83 (256)
T ss_pred hhhcCCCCeEEEEEEEcCC---CcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcE-eeeeeeeecCCcEEEEEecCCCC
Confidence 3455666678898876542 13788888765432 2234567777777633333 4555554322 588998886
Q ss_pred cC
Q 016788 143 TL 144 (382)
Q Consensus 143 ~l 144 (382)
++
T Consensus 84 ~L 85 (256)
T cd06612 84 SV 85 (256)
T ss_pred cH
Confidence 55
No 303
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=96.70 E-value=0.011 Score=54.12 Aligned_cols=30 Identities=20% Similarity=0.392 Sum_probs=25.8
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.+.||..+..
T Consensus 126 ~i~H~dl~p~nili~~-~~~~~l~dfg~~~~ 155 (267)
T cd08229 126 RVMHRDIKPANVFITA-TGVVKLGDLGLGRF 155 (267)
T ss_pred CeecCCCCHHHEEEcC-CCCEEECcchhhhc
Confidence 6899999999999975 67899999986643
No 304
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=96.70 E-value=0.019 Score=52.66 Aligned_cols=140 Identities=15% Similarity=0.187 Sum_probs=74.8
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCCc---eEEEeecC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGNG---MVQSFINA 141 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~g---~i~e~i~G 141 (382)
+.+..|....+|+....+..+....+++|.+...... .-...+|..+++.+....+ .++++.+.+. +|++|++|
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~lv~e~~~~ 90 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHI-VKLIGVITENPVWIVMELAPL 90 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCch-hceeEEEcCCCcEEEEEcCCC
Confidence 4667777789998875443222235788877544311 1123456666666543333 3455554332 68888876
Q ss_pred CcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHH
Q 016788 142 RTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKEL 221 (382)
Q Consensus 142 ~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 221 (382)
..+.. .+.+ .. . ...+..+..+ ..++...+..|.
T Consensus 91 ~~L~~--------------~l~~---~~---~--~~~~~~~~~~----------------------~~~l~~~l~~lH-- 124 (270)
T cd05056 91 GELRS--------------YLQV---NK---Y--SLDLASLILY----------------------SYQLSTALAYLE-- 124 (270)
T ss_pred CcHHH--------------HHHh---CC---C--CCCHHHHHHH----------------------HHHHHHHHHHHH--
Confidence 54421 1111 00 0 0001111111 112222232222
Q ss_pred hcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 222 AGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 222 ~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|++|.||+++. .+.+.++||..+..
T Consensus 125 ------~~~~~H~dl~p~nili~~-~~~~~l~d~g~~~~ 156 (270)
T cd05056 125 ------SKRFVHRDIAARNVLVSS-PDCVKLGDFGLSRY 156 (270)
T ss_pred ------hCCeeccccChheEEEec-CCCeEEccCceeee
Confidence 235899999999999975 67899999987654
No 305
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=96.70 E-value=0.0076 Score=58.52 Aligned_cols=29 Identities=31% Similarity=0.486 Sum_probs=25.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 123 ~ivH~dlkp~Nili~~-~~~~kL~Dfg~a~ 151 (372)
T cd07853 123 GILHRDIKPGNLLVNS-NCVLKICDFGLAR 151 (372)
T ss_pred CeeCCCCChHHEEECC-CCCEEecccccee
Confidence 5899999999999975 6789999998764
No 306
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=96.69 E-value=0.016 Score=53.04 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=25.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||..+..
T Consensus 122 ~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~ 151 (265)
T cd06631 122 CVVHRDIKGNNVMLMP-NGIIKLIDFGCARR 151 (265)
T ss_pred CcccCCcCHHhEEECC-CCeEEeccchhhHh
Confidence 4789999999999975 67899999987654
No 307
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=96.69 E-value=0.012 Score=55.76 Aligned_cols=30 Identities=30% Similarity=0.523 Sum_probs=25.8
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|+||++++ ++.+.++||+.+..
T Consensus 145 ~i~H~dL~p~Nil~~~-~~~~kl~dfg~~~~ 174 (317)
T cd06635 145 NMIHRDIKAGNILLTE-PGQVKLADFGSASI 174 (317)
T ss_pred CcccCCCCcccEEECC-CCCEEEecCCCccc
Confidence 5799999999999975 67899999987654
No 308
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=96.68 E-value=0.01 Score=54.37 Aligned_cols=29 Identities=31% Similarity=0.469 Sum_probs=25.2
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 127 ~i~H~dlkp~Nili~~-~~~~kl~dfg~~~ 155 (268)
T cd05063 127 NYVHRDLAARNILVNS-NLECKVSDFGLSR 155 (268)
T ss_pred CeeccccchhhEEEcC-CCcEEECCCccce
Confidence 5899999999999975 6789999998764
No 309
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=96.67 E-value=0.012 Score=54.18 Aligned_cols=138 Identities=19% Similarity=0.291 Sum_probs=78.7
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC----cccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD----IVINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQ 136 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~----~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~ 136 (382)
.+..+..|.-.+|-.|...... .-|-+|+-....- ..-...+|..+|+.+. .-+.-++++.+.++ +|+
T Consensus 48 ~~~tlGtGSFGrV~LVr~k~~g---~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 48 RLKTLGTGSFGRVHLVREKHSG---NYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred heeeeccCccceEEEEEEccCC---ceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEEEEE
Confidence 3456677888888888776542 3566777654310 0011245666666554 22334666666443 799
Q ss_pred EeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHH
Q 016788 137 SFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIV 216 (382)
Q Consensus 137 e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (382)
+|++|-.+- ..|++.+..+- | ..+|+. .++.-.++
T Consensus 124 eyv~GGElF--------------S~Lrk~~rF~e-----~-----~arFYA---------------------AeivlAle 158 (355)
T KOG0616|consen 124 EYVPGGELF--------------SYLRKSGRFSE-----P-----HARFYA---------------------AEIVLALE 158 (355)
T ss_pred eccCCccHH--------------HHHHhcCCCCc-----h-----hHHHHH---------------------HHHHHHHH
Confidence 999995331 22333222221 1 011211 11212222
Q ss_pred HHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 217 ELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 217 ~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.|. ..-++++||+|.|||++. .|-+.++||.+|-.
T Consensus 159 ylH--------~~~iiYRDLKPENiLlD~-~G~iKitDFGFAK~ 193 (355)
T KOG0616|consen 159 YLH--------SLDIIYRDLKPENLLLDQ-NGHIKITDFGFAKR 193 (355)
T ss_pred HHH--------hcCeeeccCChHHeeecc-CCcEEEEeccceEE
Confidence 222 246899999999999985 68899999998864
No 310
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=96.67 E-value=0.0063 Score=55.84 Aligned_cols=30 Identities=23% Similarity=0.356 Sum_probs=25.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|.||+.+..
T Consensus 126 ~i~H~~l~p~nil~~~-~~~~~l~dfg~~~~ 155 (266)
T cd06651 126 MIVHRDIKGANILRDS-AGNVKLGDFGASKR 155 (266)
T ss_pred CeeeCCCCHHHEEECC-CCCEEEccCCCccc
Confidence 5899999999999975 67899999997653
No 311
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=96.67 E-value=0.01 Score=54.49 Aligned_cols=29 Identities=21% Similarity=0.242 Sum_probs=25.4
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 120 ~ivH~dlkp~Nill~~-~~~~kl~dfg~~~ 148 (269)
T cd05042 120 DFIHSDLALRNCQLTA-DLSVKIGDYGLAL 148 (269)
T ss_pred CEecccccHhheEecC-CCcEEEecccccc
Confidence 5799999999999975 6789999998764
No 312
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=96.66 E-value=0.013 Score=54.77 Aligned_cols=30 Identities=27% Similarity=0.429 Sum_probs=25.8
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..++|+|++|.||++++ ++.+.|+||..+.
T Consensus 138 ~~ivH~dlkp~Nill~~-~~~~kl~dfg~~~ 167 (297)
T cd05089 138 KQFIHRDLAARNVLVGE-NLASKIADFGLSR 167 (297)
T ss_pred CCcccCcCCcceEEECC-CCeEEECCcCCCc
Confidence 36899999999999975 6789999998764
No 313
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=96.65 E-value=0.0095 Score=57.37 Aligned_cols=30 Identities=30% Similarity=0.429 Sum_probs=26.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 138 gi~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~ 167 (353)
T cd07850 138 GIIHRDLKPSNIVVKS-DCTLKILDFGLART 167 (353)
T ss_pred CeeeCCCCHHHEEECC-CCCEEEccCcccee
Confidence 6899999999999975 67899999998764
No 314
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=96.64 E-value=0.021 Score=51.97 Aligned_cols=30 Identities=27% Similarity=0.389 Sum_probs=25.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||..+..
T Consensus 115 ~i~H~dlkp~nill~~-~~~~kl~Dfg~~~~ 144 (257)
T cd05116 115 NFVHRDLAARNVLLVT-QHYAKISDFGLSKA 144 (257)
T ss_pred CEeecccchhhEEEcC-CCeEEECCCccccc
Confidence 5799999999999975 67799999997753
No 315
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=96.63 E-value=0.012 Score=54.43 Aligned_cols=29 Identities=28% Similarity=0.455 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 119 ~~~H~dl~p~nil~~~-~~~~~l~df~~~~ 147 (283)
T cd07835 119 RVLHRDLKPQNLLIDR-EGALKLADFGLAR 147 (283)
T ss_pred CeeCCCCCHHHEEEcC-CCcEEEeeccccc
Confidence 6899999999999986 7889999999874
No 316
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=96.61 E-value=0.011 Score=54.71 Aligned_cols=78 Identities=15% Similarity=0.204 Sum_probs=44.1
Q ss_pred EEEecceeeeeEEEEEecCC--CCCCeeEEEEEcCCCCCc-ccchHHHHHHHHHHHhCCCCceEEEEeCCc----eEEEe
Q 016788 66 VDTVSGGITNLLLKVTVKEE--SGNDVSVTVRLYGPNTDI-VINRQRELQAIKYLSAAGFGAKLLAVFGNG----MVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~--~~~~~~~vlRi~~~~~~~-~idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i~e~ 138 (382)
...+..|-...+|++...+. ......+.+|........ ..+..+|..+++.+...++ .++++.+.++ ++++|
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~ 88 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHI-VRFYGVCTEGRPLLMVFEY 88 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCC-ceEEEEEecCCceEEEEec
Confidence 45666677889999865321 111235666765443222 2234567777776654444 3455554322 58899
Q ss_pred ecCCcC
Q 016788 139 INARTL 144 (382)
Q Consensus 139 i~G~~l 144 (382)
++|.++
T Consensus 89 ~~~~~L 94 (280)
T cd05092 89 MRHGDL 94 (280)
T ss_pred CCCCCH
Confidence 987655
No 317
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=96.60 E-value=0.047 Score=50.37 Aligned_cols=78 Identities=10% Similarity=0.110 Sum_probs=43.8
Q ss_pred EEEecceeeeeEEEEEecCCCC--CCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeC-C---ceEEE
Q 016788 66 VDTVSGGITNLLLKVTVKEESG--NDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFG-N---GMVQS 137 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~--~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~i~e 137 (382)
++.|+.|....+|++......+ ....+.+|........ ..+...|..+++.+...++ .++++.+. . .+|++
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e 89 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI-VRLIGVSFERLPRFILLE 89 (277)
T ss_pred eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCE-eeEEEEEccCCCcEEEEe
Confidence 4577888888999998764211 2346777876543211 1123445555555543333 34555432 2 26889
Q ss_pred eecCCcC
Q 016788 138 FINARTL 144 (382)
Q Consensus 138 ~i~G~~l 144 (382)
|++|..|
T Consensus 90 ~~~g~~L 96 (277)
T cd05036 90 LMAGGDL 96 (277)
T ss_pred cCCCCCH
Confidence 9988544
No 318
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=96.59 E-value=0.023 Score=53.44 Aligned_cols=138 Identities=17% Similarity=0.247 Sum_probs=75.8
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC---CcccchHHHHHHHHHHHhCCCCceEEEEe--CC----ceE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT---DIVINRQRELQAIKYLSAAGFGAKLLAVF--GN----GMV 135 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~---~~~idr~~E~~~l~~l~~~gl~P~~~~~~--~~----g~i 135 (382)
.+..|..|....+|++..... +..+++|...... .......+|..+++.+...++. ++++.+ .. ..|
T Consensus 11 ~~~~ig~g~~~~v~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~~~lv 86 (309)
T cd07845 11 KLNRIGEGTYGIVYRARDTTS---GEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIV-ELKEVVVGKHLDSIFLV 86 (309)
T ss_pred EeeeeeecCCEEEEEEEECCC---CcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCc-ceEEEEecCCCCeEEEE
Confidence 345677788889999987532 2368888764321 1122335788888877655544 344433 21 157
Q ss_pred EEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHH
Q 016788 136 QSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEI 215 (382)
Q Consensus 136 ~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (382)
++|.++. +. ..+.+.+ .+-.+..+..+. .++...+
T Consensus 87 ~e~~~~~-l~--------------~~l~~~~--------~~l~~~~~~~~~----------------------~qi~~~l 121 (309)
T cd07845 87 MEYCEQD-LA--------------SLLDNMP--------TPFSESQVKCLM----------------------LQLLRGL 121 (309)
T ss_pred EecCCCC-HH--------------HHHHhcc--------cCCCHHHHHHHH----------------------HHHHHHH
Confidence 8887651 11 1111111 010111111111 1222223
Q ss_pred HHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 216 VELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 216 ~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..|.+ ..++|+|++|+||++++ ++.+.|+||..+..
T Consensus 122 ~~lH~--------~~i~H~dl~p~nil~~~-~~~~kL~dfg~~~~ 157 (309)
T cd07845 122 QYLHE--------NFIIHRDLKVSNLLLTD-KGCLKIADFGLART 157 (309)
T ss_pred HHHHh--------CCeecCCCCHHHEEECC-CCCEEECccceeee
Confidence 33322 24899999999999975 67899999987754
No 319
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=96.56 E-value=0.0034 Score=58.72 Aligned_cols=29 Identities=24% Similarity=0.464 Sum_probs=25.4
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.|+||+.+.
T Consensus 138 ~ivH~dlkp~Nill~~-~~~~kL~dfg~~~ 166 (292)
T cd06658 138 GVIHRDIKSDSILLTS-DGRIKLSDFGFCA 166 (292)
T ss_pred CEeecCCCHHHEEEcC-CCCEEEccCcchh
Confidence 5789999999999975 6789999999764
No 320
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=96.56 E-value=0.015 Score=52.81 Aligned_cols=31 Identities=19% Similarity=0.114 Sum_probs=25.6
Q ss_pred eeeeccCCCCCceeeeCCCC-------CEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQE-------KLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~-------~~~lIDfE~a~~ 260 (382)
..++|+|++|.||+++. ++ .+.+.||..+..
T Consensus 120 ~~i~H~dlkp~Nill~~-~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 120 KKLVHGNVCGKNILVAR-YGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred CCeecccCccceEEEec-CccccCCceeEEeCCCCcccc
Confidence 35899999999999975 33 589999998765
No 321
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=96.55 E-value=0.054 Score=52.04 Aligned_cols=146 Identities=16% Similarity=0.245 Sum_probs=85.7
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC---CcccchHHHHHHHHHHHhCCCCceEEEE---eC--Cc--eE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT---DIVINRQRELQAIKYLSAAGFGAKLLAV---FG--NG--MV 135 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~---~~~idr~~E~~~l~~l~~~gl~P~~~~~---~~--~g--~i 135 (382)
...|+.|....||+-...... ..+.+|.-.... ........|+.+|+.+. -|.+++. .. +. +|
T Consensus 15 ~~~iG~GsfavVykg~h~~~~---~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~----H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 15 SREIGSGSFAVVYKGRHKKSG---TEVAIKCIAKKKLNKKLVELLLSEIKILKELK----HPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred hhhccCcceEEEEEeEeccCC---ceEEeeeehhhccCHHHHHHHHHHHHHHHhcC----CcceeeEEEEEecCCeEEEE
Confidence 345889999999998876542 356666543321 12223467888887776 3444433 22 22 69
Q ss_pred EEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHH
Q 016788 136 QSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEI 215 (382)
Q Consensus 136 ~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (382)
+||.+|-.|+. ++ |+.. ..+ -.+...|+.++ ...+
T Consensus 88 MEyC~gGDLs~-------yi----------~~~~----~l~--e~t~r~Fm~QL----------------------A~al 122 (429)
T KOG0595|consen 88 MEYCNGGDLSD-------YI----------RRRG----RLP--EATARHFMQQL----------------------ASAL 122 (429)
T ss_pred EEeCCCCCHHH-------HH----------HHcC----CCC--HHHHHHHHHHH----------------------HHHH
Confidence 99999865532 11 1110 001 01223344332 2223
Q ss_pred HHHHHHhcccCCCeeeeccCCCCCceeeeCC-C----CCEEEEEeecCCCCCchhhHHhhh
Q 016788 216 VELKELAGHLNAPVVFSHNDLLSGNIMVNDE-Q----EKLYLIDFEYGSYNYRGYDIGNHF 271 (382)
Q Consensus 216 ~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~-~----~~~~lIDfE~a~~~~~~~Dla~~~ 271 (382)
+.|++ ..++|+|++|.|||+... + -.+.|=||.+|.+-.+..-..++.
T Consensus 123 q~L~~--------~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlc 175 (429)
T KOG0595|consen 123 QFLHE--------NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLC 175 (429)
T ss_pred HHHHH--------CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhh
Confidence 33332 378999999999999743 1 247899999999887666665543
No 322
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=96.54 E-value=0.012 Score=53.68 Aligned_cols=29 Identities=28% Similarity=0.463 Sum_probs=25.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 118 ~i~H~dlk~~nili~~-~~~~kl~dfg~~~ 146 (262)
T cd05058 118 KFVHRDLAARNCMLDE-SFTVKVADFGLAR 146 (262)
T ss_pred CccccccCcceEEEcC-CCcEEECCccccc
Confidence 6899999999999975 6789999998775
No 323
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=96.54 E-value=0.021 Score=54.50 Aligned_cols=30 Identities=30% Similarity=0.468 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||+.+..
T Consensus 128 ~iiH~dl~p~Nili~~-~~~~~l~dfg~~~~ 157 (328)
T cd07856 128 GVVHRDLKPSNILINE-NCDLKICDFGLARI 157 (328)
T ss_pred CcccCCCCHHHEeECC-CCCEEeCccccccc
Confidence 5899999999999975 67899999997753
No 324
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=96.54 E-value=0.016 Score=55.19 Aligned_cols=30 Identities=33% Similarity=0.404 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.|||++. ++.+.|+||..+..
T Consensus 123 ~ivH~dlkp~NIll~~-~~~~kL~Dfg~~~~ 152 (338)
T cd07859 123 NVFHRDLKPKNILANA-DCKLKICDFGLARV 152 (338)
T ss_pred CeecCCCCHHHeEECC-CCcEEEccCccccc
Confidence 5899999999999975 67899999997753
No 325
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=96.53 E-value=0.016 Score=54.77 Aligned_cols=30 Identities=30% Similarity=0.507 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||+.+..
T Consensus 141 gi~H~dl~p~nili~~-~~~~kL~dfg~~~~ 170 (313)
T cd06633 141 NMIHRDIKAGNILLTE-PGQVKLADFGSASK 170 (313)
T ss_pred CeecCCCChhhEEECC-CCCEEEeecCCCcc
Confidence 5899999999999975 67899999987754
No 326
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=96.53 E-value=0.0086 Score=55.37 Aligned_cols=29 Identities=31% Similarity=0.487 Sum_probs=25.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|+||++++ ++.+.|+||+.+.
T Consensus 119 ~i~H~dl~~~nil~~~-~~~~~l~dfg~~~ 147 (284)
T cd07839 119 NVLHRDLKPQNLLINK-NGELKLADFGLAR 147 (284)
T ss_pred CEecCCCCHHHEEEcC-CCcEEECccchhh
Confidence 5899999999999975 6789999999765
No 327
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=96.51 E-value=0.035 Score=52.10 Aligned_cols=141 Identities=19% Similarity=0.209 Sum_probs=75.5
Q ss_pred EEecceeeeeEEEEEecCC--CCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEe
Q 016788 67 DTVSGGITNLLLKVTVKEE--SGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSF 138 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~--~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~ 138 (382)
+.|..|....+|++..... ......+.+|+....... ......|..+++.+..+.-..++++.+. ++ +++||
T Consensus 41 ~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 120 (302)
T cd05055 41 KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEY 120 (302)
T ss_pred ceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEc
Confidence 4566677788998864221 112235777876543211 1123567778877754433345555542 22 68899
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++|.+|.. .+ +.... ...+ +..+..+. .++...+..+
T Consensus 121 ~~~~~L~~--------------~i---~~~~~--~~l~--~~~~~~i~----------------------~~i~~~l~~l 157 (302)
T cd05055 121 CCYGDLLN--------------FL---RRKRE--SFLT--LEDLLSFS----------------------YQVAKGMAFL 157 (302)
T ss_pred CCCCcHHH--------------HH---HhCCC--CCCC--HHHHHHHH----------------------HHHHHHHHHH
Confidence 98765421 11 11000 0001 11111111 1122223333
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
. ...++|+|++|.||++++ ++.+.++||..+.
T Consensus 158 H--------~~~ivH~dlkp~Nil~~~-~~~~~l~dfg~~~ 189 (302)
T cd05055 158 A--------SKNCIHRDLAARNVLLTH-GKIVKICDFGLAR 189 (302)
T ss_pred H--------HCCeehhhhccceEEEcC-CCeEEECCCcccc
Confidence 2 125899999999999975 6778999999765
No 328
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=96.51 E-value=0.0073 Score=55.80 Aligned_cols=30 Identities=30% Similarity=0.436 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++++||++++ ++.+.|.||..+..
T Consensus 119 ~i~H~dl~~~ni~i~~-~~~~~l~d~~~~~~ 148 (283)
T cd07830 119 GFFHRDLKPENLLVSG-PEVVKIADFGLARE 148 (283)
T ss_pred CcccCCCChhhEEEcC-CCCEEEeeccccee
Confidence 5899999999999975 68899999987653
No 329
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=96.48 E-value=0.018 Score=53.39 Aligned_cols=30 Identities=27% Similarity=0.428 Sum_probs=26.0
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..++|+|++|.||++++ ++.+.++||..+.
T Consensus 149 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~ 178 (288)
T cd05050 149 RKFVHRDLATRNCLVGE-NMVVKIADFGLSR 178 (288)
T ss_pred CCeecccccHhheEecC-CCceEECccccce
Confidence 37999999999999975 6789999998764
No 330
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=96.47 E-value=0.038 Score=50.41 Aligned_cols=29 Identities=28% Similarity=0.453 Sum_probs=25.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 115 ~i~H~dlkp~nil~~~-~~~~kl~dfg~~~ 143 (257)
T cd05115 115 NFVHRDLAARNVLLVN-QHYAKISDFGLSK 143 (257)
T ss_pred CeeecccchheEEEcC-CCcEEeccCCccc
Confidence 5899999999999975 6789999998765
No 331
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=96.46 E-value=0.012 Score=56.44 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=26.5
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 192 ~~ivHrDikp~Nill~~-~~~vkL~DfG~a~~ 222 (337)
T cd05054 192 RKCIHRDLAARNILLSE-NNVVKICDFGLARD 222 (337)
T ss_pred CCeecCCCCcceEEEeC-CCcEEEeccccchh
Confidence 36899999999999985 67899999997753
No 332
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.46 E-value=0.024 Score=52.56 Aligned_cols=74 Identities=16% Similarity=0.213 Sum_probs=42.9
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEe--CCc--eEEEeec
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVF--GNG--MVQSFIN 140 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~--~~g--~i~e~i~ 140 (382)
+.|..|..+.+|++..... +..+.+|+...... ......+|.++++.+...++ +++++.+ .+. +|+||++
T Consensus 11 ~~ig~g~~g~v~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~ 86 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPT---GTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYI-VSFYGAFLNENNICMCMEFMD 86 (284)
T ss_pred HHcCCCCCeEEEEEEEcCC---CcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCc-ceEeeeEecCCEEEEEEecCC
Confidence 4566777788998876532 13677777643321 11223567777766654344 3444443 222 5899998
Q ss_pred CCcC
Q 016788 141 ARTL 144 (382)
Q Consensus 141 G~~l 144 (382)
|..+
T Consensus 87 ~~~L 90 (284)
T cd06620 87 CGSL 90 (284)
T ss_pred CCCH
Confidence 8654
No 333
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=96.46 E-value=0.023 Score=54.12 Aligned_cols=29 Identities=34% Similarity=0.528 Sum_probs=25.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|+||++++ ++.+.|+||..+.
T Consensus 125 givH~dlkp~Nili~~-~~~~kl~Dfg~a~ 153 (332)
T cd07857 125 NVLHRDLKPGNLLVNA-DCELKICDFGLAR 153 (332)
T ss_pred CcccCCCCHHHeEEcC-CCCEEeCcCCCce
Confidence 5899999999999975 6789999999875
No 334
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=96.45 E-value=0.02 Score=51.70 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=27.0
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
..++|+|++|.||++++ ++.+.++||+.+...
T Consensus 112 ~~~~H~~l~p~ni~~~~-~~~~~l~d~~~~~~~ 143 (250)
T cd05123 112 LGIIYRDLKPENILLDA-DGHIKLTDFGLAKEL 143 (250)
T ss_pred CCceecCCCcceEEEcC-CCcEEEeecCcceec
Confidence 46899999999999975 678999999977553
No 335
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=96.44 E-value=0.019 Score=62.14 Aligned_cols=76 Identities=13% Similarity=0.147 Sum_probs=45.1
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC--C-cccchHHHHHHHHHHHhCCCCceEEEEe--C-Cc---eE
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT--D-IVINRQRELQAIKYLSAAGFGAKLLAVF--G-NG---MV 135 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~--~-~~idr~~E~~~l~~l~~~gl~P~~~~~~--~-~g---~i 135 (382)
.+..|..|-...||++..... ...+++|+..... . ..-....|+.+++.|....+. +++..+ . +. +|
T Consensus 17 Il~kLG~GgFGtVYLAkdk~t---g~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIV-rl~d~f~de~~~~lyIV 92 (1021)
T PTZ00266 17 VIKKIGNGRFGEVFLVKHKRT---QEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIV-RYIDRFLNKANQKLYIL 92 (1021)
T ss_pred EEEEEecCCCeEEEEEEECCC---CeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcC-eEEEEEEecCCCEEEEE
Confidence 456777788889999987543 2356677654321 1 111224577777777654443 444433 2 22 58
Q ss_pred EEeecCCcC
Q 016788 136 QSFINARTL 144 (382)
Q Consensus 136 ~e~i~G~~l 144 (382)
++|++|.+|
T Consensus 93 MEY~~gGSL 101 (1021)
T PTZ00266 93 MEFCDAGDL 101 (1021)
T ss_pred EeCCCCCcH
Confidence 999988655
No 336
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=96.44 E-value=0.015 Score=54.41 Aligned_cols=29 Identities=28% Similarity=0.449 Sum_probs=25.2
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.|+||..+.
T Consensus 135 gi~H~dL~p~Nili~~-~~~~kL~dfg~~~ 163 (293)
T cd06647 135 QVIHRDIKSDNILLGM-DGSVKLTDFGFCA 163 (293)
T ss_pred CEeeccCCHHHEEEcC-CCCEEEccCccee
Confidence 5899999999999975 6789999998664
No 337
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=96.43 E-value=0.043 Score=50.60 Aligned_cols=141 Identities=13% Similarity=0.158 Sum_probs=76.1
Q ss_pred EEecceeeeeEEEEEecCC-CCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCC---ceEEEeec
Q 016788 67 DTVSGGITNLLLKVTVKEE-SGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGN---GMVQSFIN 140 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~-~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~---g~i~e~i~ 140 (382)
+.|+.|....+|+...... ......+.+|........ .....+|..+++.+...++ .++++.... ..+++|++
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~v~e~~~ 91 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHV-VRLLGICLSSQVQLITQLMP 91 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCc-ceEEEEEecCceEEEEecCC
Confidence 5677788889999876432 111235777876543221 1122456666666644333 344444322 25888887
Q ss_pred CCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHH
Q 016788 141 ARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKE 220 (382)
Q Consensus 141 G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 220 (382)
|..+... ++.... +-.+..+..+. .++...+..|.+
T Consensus 92 ~g~L~~~-----------------l~~~~~-----~~~~~~~~~~~----------------------~qi~~~l~~LH~ 127 (279)
T cd05057 92 LGCLLDY-----------------VRNHKD-----NIGSQYLLNWC----------------------VQIAKGMSYLEE 127 (279)
T ss_pred CCcHHHH-----------------HHhccC-----CCCHHHHHHHH----------------------HHHHHHHHHHHh
Confidence 7544210 111100 00011111111 112222333321
Q ss_pred HhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 221 LAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 221 ~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
..++|+|++|.||++++ ++.+.|+||..+..-
T Consensus 128 --------~~i~H~di~p~nil~~~-~~~~kL~dfg~~~~~ 159 (279)
T cd05057 128 --------KRLVHRDLAARNVLVKT-PQHVKITDFGLAKLL 159 (279)
T ss_pred --------CCEEecccCcceEEEcC-CCeEEECCCcccccc
Confidence 47899999999999975 678999999987643
No 338
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=96.43 E-value=0.01 Score=55.72 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=25.4
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.|+||+.+.
T Consensus 137 ~ivH~dl~p~Nill~~-~~~~kL~dfg~~~ 165 (297)
T cd06659 137 GVIHRDIKSDSILLTL-DGRVKLSDFGFCA 165 (297)
T ss_pred CeecCCCCHHHeEEcc-CCcEEEeechhHh
Confidence 5799999999999975 6789999999764
No 339
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=96.43 E-value=0.018 Score=53.85 Aligned_cols=30 Identities=27% Similarity=0.447 Sum_probs=26.4
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|+||++++ ++.+.++||..+..
T Consensus 135 ~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~ 164 (311)
T cd07866 135 HILHRDIKAANILIDN-QGILKIADFGLARP 164 (311)
T ss_pred CeecCCCCHHHEEECC-CCCEEECcCccchh
Confidence 6899999999999975 67899999998764
No 340
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=96.42 E-value=0.013 Score=54.10 Aligned_cols=31 Identities=23% Similarity=0.364 Sum_probs=26.4
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.||++++ ++.+.++||..+..
T Consensus 120 ~~ivH~dl~p~ni~i~~-~~~~~l~dfg~~~~ 150 (277)
T cd06642 120 ERKIHRDIKAANVLLSE-QGDVKLADFGVAGQ 150 (277)
T ss_pred CCeeccCCChheEEEeC-CCCEEEcccccccc
Confidence 36899999999999975 67899999987653
No 341
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=96.42 E-value=0.076 Score=50.02 Aligned_cols=72 Identities=17% Similarity=0.219 Sum_probs=42.1
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEe--CC-c---eEEEeec
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVF--GN-G---MVQSFIN 140 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~--~~-g---~i~e~i~ 140 (382)
..|..|....||++...++. ....+.+|...... ......+|..+++.+...++. +++..+ .. . ++++|.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~-~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGK-DDRDYALKQIEGTG-ISMSACREIALLRELKHPNVI-SLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred cccccCCCeEEEEEEEccCC-CCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCc-ceeeeEecCCCcEEEEEEeccC
Confidence 46777888899999764321 12467888764321 122346788888887655443 333332 22 2 4677776
Q ss_pred C
Q 016788 141 A 141 (382)
Q Consensus 141 G 141 (382)
+
T Consensus 84 ~ 84 (317)
T cd07868 84 H 84 (317)
T ss_pred C
Confidence 5
No 342
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=96.42 E-value=0.037 Score=52.37 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=28.9
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..+||+|++|.|+|++++.+.+.|-||.-|..
T Consensus 144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred cCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 58999999999999998778999999997754
No 343
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=96.42 E-value=0.014 Score=53.51 Aligned_cols=29 Identities=28% Similarity=0.425 Sum_probs=25.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||+++. ++.+.++||..+.
T Consensus 126 ~i~H~dlkp~nili~~-~~~~~l~dfg~~~ 154 (267)
T cd06645 126 GKMHRDIKGANILLTD-NGHVKLADFGVSA 154 (267)
T ss_pred CeecCCCCHHHEEECC-CCCEEECcceeee
Confidence 5899999999999975 6789999998764
No 344
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=96.41 E-value=0.043 Score=51.09 Aligned_cols=31 Identities=26% Similarity=0.299 Sum_probs=26.6
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.||++++ ++.+.|+||..+..
T Consensus 142 ~~i~H~dlkp~Nil~~~-~~~~~l~dfg~a~~ 172 (291)
T cd05094 142 QHFVHRDLATRNCLVGA-NLLVKIGDFGMSRD 172 (291)
T ss_pred CCeeecccCcceEEEcc-CCcEEECCCCcccc
Confidence 36899999999999975 67899999998753
No 345
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=96.40 E-value=0.04 Score=50.35 Aligned_cols=29 Identities=28% Similarity=0.477 Sum_probs=25.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.|+||..+.
T Consensus 133 ~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~ 161 (273)
T cd05035 133 NFIHRDLAARNCMLRE-DMTVCVADFGLSK 161 (273)
T ss_pred CeeccccchheEEECC-CCeEEECCcccee
Confidence 5799999999999975 6789999998765
No 346
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=96.40 E-value=0.033 Score=51.76 Aligned_cols=31 Identities=26% Similarity=0.462 Sum_probs=26.4
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.||++++ ++.+.|+||..+..
T Consensus 146 ~~ivH~dikp~nill~~-~~~~kl~dfg~~~~ 176 (290)
T cd05045 146 MKLVHRDLAARNVLVAE-GRKMKISDFGLSRD 176 (290)
T ss_pred CCeehhhhhhheEEEcC-CCcEEecccccccc
Confidence 46899999999999975 67899999987653
No 347
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=96.38 E-value=0.021 Score=53.25 Aligned_cols=30 Identities=30% Similarity=0.563 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|.||..+..
T Consensus 136 ~i~H~dl~p~nili~~-~~~~kl~dfg~~~~ 165 (302)
T cd07864 136 NFLHRDIKCSNILLNN-KGQIKLADFGLARL 165 (302)
T ss_pred CeecCCCCHHHEEECC-CCcEEeCccccccc
Confidence 5899999999999975 67899999997764
No 348
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=96.36 E-value=0.023 Score=53.29 Aligned_cols=74 Identities=12% Similarity=0.212 Sum_probs=43.7
Q ss_pred EEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC---Ccc-cchHHHHHHHHHHHhCCCCceEEEEe-CC--c---eE
Q 016788 66 VDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT---DIV-INRQRELQAIKYLSAAGFGAKLLAVF-GN--G---MV 135 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~---~~~-idr~~E~~~l~~l~~~gl~P~~~~~~-~~--g---~i 135 (382)
+..|..|....+|++..... +....+.+|+..... ... -...+|..++..+...++. ++++.+ .. . +|
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~-~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~~~lv 82 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNG-KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVV-SLVEVFLEHADKSVYLL 82 (316)
T ss_pred EEEeccCCcEEEEEEEecCC-CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCcc-ceEEEEeCCCCceEEEE
Confidence 35577788889999987541 123478999876532 111 1235677777766554443 344433 22 2 58
Q ss_pred EEeecC
Q 016788 136 QSFINA 141 (382)
Q Consensus 136 ~e~i~G 141 (382)
+||+++
T Consensus 83 ~e~~~~ 88 (316)
T cd07842 83 FDYAEH 88 (316)
T ss_pred EeCCCc
Confidence 888765
No 349
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=96.36 E-value=0.02 Score=54.49 Aligned_cols=30 Identities=30% Similarity=0.462 Sum_probs=25.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++++||++++ ++.+.++||..+..
T Consensus 139 ~i~H~dl~~~nill~~-~~~~kl~dfg~~~~ 168 (335)
T PTZ00024 139 YFMHRDLSPANIFINS-KGICKIADFGLARR 168 (335)
T ss_pred CeecccccHHHeEECC-CCCEEECCccceee
Confidence 6899999999999975 67899999997753
No 350
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=96.35 E-value=0.018 Score=52.73 Aligned_cols=29 Identities=28% Similarity=0.436 Sum_probs=24.7
Q ss_pred eeeccCCCCCceeeeCCCC-----CEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQE-----KLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~-----~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++ .+.++||..+.
T Consensus 126 ~i~H~dl~p~nil~~~-~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 126 HFIHRDLAARNCLVSE-KGYDADRVVKIGDFGLAR 159 (269)
T ss_pred CcccCCCChheEEEec-CCCCCCcceEECCccccc
Confidence 4799999999999975 34 69999998775
No 351
>PHA02988 hypothetical protein; Provisional
Probab=96.33 E-value=0.03 Score=52.16 Aligned_cols=72 Identities=11% Similarity=0.177 Sum_probs=44.2
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc---cc-chHHHHHHHHHHHhCCCCceEEEEeC----Cc----e
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI---VI-NRQRELQAIKYLSAAGFGAKLLAVFG----NG----M 134 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~---~i-dr~~E~~~l~~l~~~gl~P~~~~~~~----~g----~ 134 (382)
..+..|....+|+....+. .+++|........ .+ ...+|..++..+...++ .++++.+. +. +
T Consensus 26 ~~i~~g~~~~v~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~~~g~~~~~~~~~~~~~l 99 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNK-----EVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNI-LKIYGFIIDIVDDLPRLSL 99 (283)
T ss_pred eEEeeCCceEEEEEEECCE-----EEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCE-EEEeeeEEecccCCCceEE
Confidence 3455676778999887543 7899987643211 11 22478888877755433 45555431 11 5
Q ss_pred EEEeecCCcC
Q 016788 135 VQSFINARTL 144 (382)
Q Consensus 135 i~e~i~G~~l 144 (382)
|+||++|..|
T Consensus 100 v~Ey~~~g~L 109 (283)
T PHA02988 100 ILEYCTRGYL 109 (283)
T ss_pred EEEeCCCCcH
Confidence 8999988655
No 352
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=96.32 E-value=0.044 Score=53.98 Aligned_cols=78 Identities=17% Similarity=0.194 Sum_probs=45.9
Q ss_pred EEecceeeeeEEEEEecCC--CCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEe
Q 016788 67 DTVSGGITNLLLKVTVKEE--SGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSF 138 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~--~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~ 138 (382)
..|..|....||++...+. ......+.+|+....... .-...+|..++..+..+.-..++++.+. ++ +|+||
T Consensus 43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~ 122 (401)
T cd05107 43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEY 122 (401)
T ss_pred hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEec
Confidence 5777888899999875431 112246888887543211 1122457777776653322345565543 22 68999
Q ss_pred ecCCcC
Q 016788 139 INARTL 144 (382)
Q Consensus 139 i~G~~l 144 (382)
++|..|
T Consensus 123 ~~~g~L 128 (401)
T cd05107 123 CRYGDL 128 (401)
T ss_pred cCCCcH
Confidence 987654
No 353
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=96.31 E-value=0.11 Score=47.08 Aligned_cols=30 Identities=27% Similarity=0.358 Sum_probs=26.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|+++.||++++ ++.+.++||+.+..
T Consensus 121 ~i~h~~l~~~nil~~~-~~~~~l~d~~~~~~ 150 (256)
T cd08218 121 KILHRDIKSQNIFLTK-DGTIKLGDFGIARV 150 (256)
T ss_pred CEecCCCCHHHEEEcC-CCCEEEeeccceee
Confidence 6899999999999975 67899999997754
No 354
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=96.31 E-value=0.11 Score=48.68 Aligned_cols=72 Identities=15% Similarity=0.219 Sum_probs=41.4
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEe--C-Cc---eEEEeec
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVF--G-NG---MVQSFIN 140 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~--~-~g---~i~e~i~ 140 (382)
..|..|....+|++...++. ....+.+|...... ......+|..+++.+...++. +++..+ . +. .|++|.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~-~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGK-DEKEYALKQIEGTG-ISMSACREIALLRELKHPNVI-ALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCC-ccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCee-eEEEEEeccCCCeEEEEEeeeC
Confidence 46777888899999865421 22467777664322 112335788777777544433 333332 2 22 5788877
Q ss_pred C
Q 016788 141 A 141 (382)
Q Consensus 141 G 141 (382)
+
T Consensus 84 ~ 84 (317)
T cd07867 84 H 84 (317)
T ss_pred C
Confidence 6
No 355
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=96.31 E-value=0.054 Score=49.72 Aligned_cols=30 Identities=30% Similarity=0.389 Sum_probs=25.9
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..++|+|+.|.||++++ ++.+.++||..+.
T Consensus 138 ~~i~H~di~p~nill~~-~~~~kl~dfg~~~ 167 (277)
T cd05032 138 KKFVHRDLAARNCMVAE-DLTVKIGDFGMTR 167 (277)
T ss_pred CCccccccChheEEEcC-CCCEEECCcccch
Confidence 36899999999999975 6789999998764
No 356
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=96.29 E-value=0.053 Score=50.20 Aligned_cols=29 Identities=24% Similarity=0.445 Sum_probs=25.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||+++. ++.+.++||..+.
T Consensus 128 ~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~ 156 (288)
T cd06616 128 KIIHRDVKPSNILLDR-NGNIKLCDFGISG 156 (288)
T ss_pred CeeccCCCHHHEEEcc-CCcEEEeecchhH
Confidence 5899999999999975 6789999998653
No 357
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=96.27 E-value=0.015 Score=54.83 Aligned_cols=30 Identities=30% Similarity=0.435 Sum_probs=26.2
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||+.+..
T Consensus 135 ~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~ 164 (308)
T cd06634 135 NMIHRDVKAGNILLSE-PGLVKLGDFGSASI 164 (308)
T ss_pred CcccCCCCHHhEEECC-CCcEEECCccccee
Confidence 5799999999999975 67899999997764
No 358
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=96.22 E-value=0.024 Score=54.11 Aligned_cols=29 Identities=31% Similarity=0.474 Sum_probs=25.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.|+||..+.
T Consensus 127 ~i~H~dl~p~nill~~-~~~~kl~d~g~~~ 155 (337)
T cd07852 127 NVIHRDLKPSNILLNS-DCRVKLADFGLAR 155 (337)
T ss_pred CeecCCCCHHHEEEcC-CCcEEEeeccchh
Confidence 6899999999999975 6789999998664
No 359
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=96.20 E-value=0.054 Score=51.94 Aligned_cols=30 Identities=33% Similarity=0.531 Sum_probs=26.2
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||..+..
T Consensus 138 gi~H~dlkp~Nill~~-~~~~kl~dfg~~~~ 167 (343)
T cd07880 138 GIIHRDLKPGNLAVNE-DCELKILDFGLARQ 167 (343)
T ss_pred CeecCCCCHHHEEEcC-CCCEEEeecccccc
Confidence 5899999999999975 67899999997754
No 360
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.19 E-value=0.019 Score=56.47 Aligned_cols=155 Identities=13% Similarity=0.233 Sum_probs=84.8
Q ss_pred hcCCCCCCCCCC-eEEEEecceeeeeEEEEEecCCCCCCeeEEEEE-c--CCCCCcccchHHHHHHHHHHHhCCCCc-eE
Q 016788 52 LFKQWSKLDDSR-FSVDTVSGGITNLLLKVTVKEESGNDVSVTVRL-Y--GPNTDIVINRQRELQAIKYLSAAGFGA-KL 126 (382)
Q Consensus 52 ~~~~W~~~~~~~-~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi-~--~~~~~~~idr~~E~~~l~~l~~~gl~P-~~ 126 (382)
.+.+|.....+. -.+..|..|....||+....... .-|-+|. . ....+..+-..+|+.+|+.|....+.. .-
T Consensus 107 ~~~~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tg---kivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~e 183 (560)
T KOG0600|consen 107 ALHGWGPRRADSFEKIEKIGEGTYGQVYKARDLETG---KIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEE 183 (560)
T ss_pred ccccccccchHHHHHHHHhcCcchhheeEeeecccC---cEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceee
Confidence 344565322222 25678899999999998765431 2344443 2 222334455679999999887655532 22
Q ss_pred EEEeC-Cc---eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhc
Q 016788 127 LAVFG-NG---MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSM 202 (382)
Q Consensus 127 ~~~~~-~g---~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (382)
+-+.. .| +|+||++-.-.. -+++-.+... .| .+..|+.+
T Consensus 184 ivt~~~~~siYlVFeYMdhDL~G------------------Ll~~p~vkft-~~----qIKc~mkQ-------------- 226 (560)
T KOG0600|consen 184 IVTSKLSGSIYLVFEYMDHDLSG------------------LLSSPGVKFT-EP----QIKCYMKQ-------------- 226 (560)
T ss_pred EEEecCCceEEEEEecccchhhh------------------hhcCCCcccC-hH----HHHHHHHH--------------
Confidence 22233 34 588998652110 0111000000 01 12222222
Q ss_pred ccccCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCc
Q 016788 203 YETISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYR 263 (382)
Q Consensus 203 ~~~~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~ 263 (382)
|..-++. -....+.|+|++..|||++. +|.+.|=||..|.+.++
T Consensus 227 --------Ll~Gl~~--------cH~~gvlHRDIK~SNiLidn-~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 227 --------LLEGLEY--------CHSRGVLHRDIKGSNILIDN-NGVLKIADFGLARFYTP 270 (560)
T ss_pred --------HHHHHHH--------HhhcCeeeccccccceEEcC-CCCEEeccccceeeccC
Confidence 1111111 12347889999999999974 78999999998885433
No 361
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=96.18 E-value=0.11 Score=47.93 Aligned_cols=29 Identities=28% Similarity=0.463 Sum_probs=25.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.+.||..+.
T Consensus 120 ~i~H~~l~p~nill~~-~~~~~l~dfg~~~ 148 (284)
T cd07860 120 RVLHRDLKPQNLLINT-EGAIKLADFGLAR 148 (284)
T ss_pred CeecCCCCHHHEEECC-CCCEEEeeccchh
Confidence 5899999999999975 6789999998764
No 362
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=96.09 E-value=0.0039 Score=55.43 Aligned_cols=41 Identities=27% Similarity=0.450 Sum_probs=34.2
Q ss_pred CCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhH
Q 016788 227 APVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDI 267 (382)
Q Consensus 227 ~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dl 267 (382)
...++.|+|.+|.|++++....++.+|||..|-+-.|..|-
T Consensus 149 HS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eY 189 (338)
T KOG0668|consen 149 HSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 189 (338)
T ss_pred HhcCcccccCCcceeeechhhceeeeeecchHhhcCCCcee
Confidence 45689999999999999877788999999988776665543
No 363
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=96.07 E-value=0.19 Score=46.26 Aligned_cols=30 Identities=27% Similarity=0.435 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|+++.||++++ ++.+.|+||..+..
T Consensus 127 ~i~h~~l~~~nili~~-~~~~~l~dfg~~~~ 156 (287)
T cd07838 127 RIVHRDLKPQNILVTS-DGQVKIADFGLARI 156 (287)
T ss_pred CeeeccCChhhEEEcc-CCCEEEeccCccee
Confidence 5899999999999986 58899999987644
No 364
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=96.05 E-value=0.097 Score=47.96 Aligned_cols=81 Identities=14% Similarity=0.163 Sum_probs=44.1
Q ss_pred CeEE-EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcc--cchHHHHHHHHHHHhCCCCceEEEEeCCc----eE
Q 016788 63 RFSV-DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIV--INRQRELQAIKYLSAAGFGAKLLAVFGNG----MV 135 (382)
Q Consensus 63 ~~~i-~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~--idr~~E~~~l~~l~~~gl~P~~~~~~~~g----~i 135 (382)
.+++ +.|..|....+|+............+.+|......... ....+|...+..+...+ .+++++.+..+ +|
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSN-IVRLEGVITRGNTMMIV 84 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCC-cCeEEEEEecCCCcEEE
Confidence 3444 45677777889987654222122357777765432211 12234555555443222 25666665332 69
Q ss_pred EEeecCCcC
Q 016788 136 QSFINARTL 144 (382)
Q Consensus 136 ~e~i~G~~l 144 (382)
+||++|..+
T Consensus 85 ~e~~~~~~L 93 (266)
T cd05064 85 TEYMSNGAL 93 (266)
T ss_pred EEeCCCCcH
Confidence 999988655
No 365
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=96.01 E-value=0.037 Score=52.99 Aligned_cols=31 Identities=29% Similarity=0.385 Sum_probs=26.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|+++.||+++.+++.+.++||..+..
T Consensus 134 givH~dikp~Nili~~~~~~~kl~dfg~~~~ 164 (342)
T cd07854 134 NVLHRDLKPANVFINTEDLVLKIGDFGLARI 164 (342)
T ss_pred CcccCCCCHHHEEEcCCCceEEECCccccee
Confidence 5899999999999975456789999998754
No 366
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=96.00 E-value=0.081 Score=48.44 Aligned_cols=30 Identities=30% Similarity=0.474 Sum_probs=25.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||..+..
T Consensus 133 ~i~H~dikp~nili~~-~~~~kl~dfg~~~~ 162 (273)
T cd05074 133 NFIHRDLAARNCMLNE-NMTVCVADFGLSKK 162 (273)
T ss_pred CEeecccchhhEEEcC-CCCEEECccccccc
Confidence 5899999999999975 67799999987653
No 367
>PRK10345 hypothetical protein; Provisional
Probab=95.99 E-value=0.081 Score=47.23 Aligned_cols=58 Identities=14% Similarity=0.053 Sum_probs=34.8
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC-cccchHHHHHHHHHHHhCCC----CceEEEEe
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD-IVINRQRELQAIKYLSAAGF----GAKLLAVF 130 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~-~~idr~~E~~~l~~l~~~gl----~P~~~~~~ 130 (382)
..|..|.+-.+|. .++. + ..++|+...... ..-+..+|+.+++.|+..+. .|++++..
T Consensus 8 ~~LG~G~~~~Vy~--hp~~---~-~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~ 70 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPED---A-QRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTV 70 (210)
T ss_pred ceecCCCceEEEE--CCCC---c-CeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEE
Confidence 5777888888995 3322 1 346776543311 11234789999998865333 35777765
No 368
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=95.97 E-value=0.021 Score=50.76 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=28.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCCCch
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~ 264 (382)
.++|+|+.+.||++++ ++.+.++||+.+..-...
T Consensus 107 ~i~h~~i~~~ni~~~~-~~~~~l~d~~~~~~~~~~ 140 (244)
T smart00220 107 GIIHRDLKPENILLDE-DGHVKLADFGLARQLDPG 140 (244)
T ss_pred CeecCCcCHHHeEECC-CCcEEEccccceeeeccc
Confidence 7899999999999985 578999999988765443
No 369
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=95.95 E-value=0.068 Score=54.23 Aligned_cols=29 Identities=28% Similarity=0.424 Sum_probs=25.4
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 163 ~IiHrDLKP~NILl~~-~~~vkL~DFGls~ 191 (496)
T PTZ00283 163 HMIHRDIKSANILLCS-NGLVKLGDFGFSK 191 (496)
T ss_pred CEecCCCCHHHEEEeC-CCCEEEEecccCe
Confidence 5899999999999975 6789999998763
No 370
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=95.94 E-value=0.025 Score=52.63 Aligned_cols=29 Identities=28% Similarity=0.480 Sum_probs=25.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|+.|.||++++ ++.+.++||+.+.
T Consensus 126 ~i~H~dl~p~nili~~-~~~~~l~d~g~~~ 154 (293)
T cd07843 126 WILHRDLKTSNLLLNN-RGILKICDFGLAR 154 (293)
T ss_pred CeeeccCCHHHEEECC-CCcEEEeecCcee
Confidence 5899999999999975 6789999998664
No 371
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=95.92 E-value=0.048 Score=51.15 Aligned_cols=30 Identities=23% Similarity=0.464 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 129 ~ivH~dikp~Nill~~-~~~~kL~Dfg~~~~ 158 (303)
T cd05110 129 RLVHRDLAARNVLVKS-PNHVKITDFGLARL 158 (303)
T ss_pred CeeccccccceeeecC-CCceEEcccccccc
Confidence 5799999999999975 67899999997764
No 372
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=95.91 E-value=0.037 Score=53.07 Aligned_cols=79 Identities=13% Similarity=0.117 Sum_probs=45.2
Q ss_pred EEEecceeeeeEEEEEecC--CCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHhCCCCceEEEEe--CCc---eEE
Q 016788 66 VDTVSGGITNLLLKVTVKE--ESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSAAGFGAKLLAVF--GNG---MVQ 136 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~~--~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~~gl~P~~~~~~--~~g---~i~ 136 (382)
.+.|..|....+|++...+ .......+.+|+...... ..-...+|..++..+..+....++++.+ .++ .++
T Consensus 12 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (343)
T cd05103 12 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (343)
T ss_pred cccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEE
Confidence 4567778888999986321 111224688887754321 1112346777777775432234555433 222 588
Q ss_pred EeecCCcC
Q 016788 137 SFINARTL 144 (382)
Q Consensus 137 e~i~G~~l 144 (382)
||++|..|
T Consensus 92 ey~~~g~L 99 (343)
T cd05103 92 EFCKFGNL 99 (343)
T ss_pred eccCCCcH
Confidence 99988655
No 373
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=95.90 E-value=0.11 Score=46.93 Aligned_cols=31 Identities=23% Similarity=0.255 Sum_probs=26.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
.++|+|++|.||++++ ++.+.++||..+..-
T Consensus 123 ~i~h~~l~~~ni~~~~-~~~~kl~d~g~~~~~ 153 (256)
T cd08530 123 KILHRDLKSANILLVA-NDLVKIGDLGISKVL 153 (256)
T ss_pred CcccCCCCcceEEEec-CCcEEEeeccchhhh
Confidence 5799999999999985 678999999877543
No 374
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=95.89 E-value=0.087 Score=48.10 Aligned_cols=30 Identities=23% Similarity=0.356 Sum_probs=26.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|+||++++ ++.+.+.||..+..
T Consensus 126 ~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~~ 155 (264)
T cd06653 126 MIVHRDIKGANILRDS-AGNVKLGDFGASKR 155 (264)
T ss_pred CEecCCCCHHHEEEcC-CCCEEECccccccc
Confidence 5899999999999975 67899999997764
No 375
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=95.88 E-value=0.043 Score=52.31 Aligned_cols=30 Identities=27% Similarity=0.410 Sum_probs=25.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||..+..
T Consensus 126 ~ivH~dlkp~Nill~~-~~~~kl~dfg~~~~ 155 (336)
T cd07849 126 NVLHRDLKPSNLLLNT-NCDLKICDFGLARI 155 (336)
T ss_pred CeeccCCCHHHEEECC-CCCEEECcccceee
Confidence 5899999999999975 67899999997654
No 376
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=95.80 E-value=0.0095 Score=60.12 Aligned_cols=37 Identities=24% Similarity=0.467 Sum_probs=29.6
Q ss_pred CeeeeccCCCCCceeeeC-CCCCEEEEEeecCCCCCch
Q 016788 228 PVVFSHNDLLSGNIMVND-EQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~-~~~~~~lIDfE~a~~~~~~ 264 (382)
...++|+||+|.|||+.+ +...|.||||.-|++-...
T Consensus 307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~ 344 (586)
T KOG0667|consen 307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR 344 (586)
T ss_pred hCCeeeccCChhheeeccCCcCceeEEecccccccCCc
Confidence 568999999999999863 2346999999998875443
No 377
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=95.75 E-value=0.095 Score=48.93 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=26.2
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||+++. ++.+.|.||+.+..
T Consensus 139 ~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~ 168 (310)
T cd07865 139 KILHRDMKAANILITK-DGILKLADFGLARA 168 (310)
T ss_pred CeeccCCCHHHEEECC-CCcEEECcCCCccc
Confidence 5899999999999975 67899999998754
No 378
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=95.68 E-value=0.029 Score=51.61 Aligned_cols=30 Identities=33% Similarity=0.433 Sum_probs=25.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|+++.||++++ ++.+.|.||..+..
T Consensus 118 ~i~H~~l~~~ni~~~~-~~~~~l~d~g~~~~ 147 (282)
T cd07829 118 RILHRDLKPQNILINR-DGVLKLADFGLARA 147 (282)
T ss_pred CcccCCCChheEEEcC-CCCEEEecCCcccc
Confidence 5799999999999975 67899999987653
No 379
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=95.59 E-value=0.097 Score=47.88 Aligned_cols=143 Identities=16% Similarity=0.203 Sum_probs=76.8
Q ss_pred EEEecceeeeeEEEEEec-CCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeC-Cc---eEEEe
Q 016788 66 VDTVSGGITNLLLKVTVK-EESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFG-NG---MVQSF 138 (382)
Q Consensus 66 i~~l~gG~tN~~y~v~~~-~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~-~g---~i~e~ 138 (382)
...|+.|....+|+++.. ........++||+....... .-+..+|.+.++.+ ++.--.++++... ++ .|+||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEEEE-
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-cccccccccccccccccccccccc
Confidence 356777888899999887 22223457889998553221 22334566666666 3333356777653 22 68999
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
.++.+|.. ... . .. . .+-.+.....++ .++...+..|
T Consensus 83 ~~~g~L~~-------~L~-------~---~~--~--~~~~~~~~~~i~----------------------~~i~~~l~~L 119 (259)
T PF07714_consen 83 CPGGSLDD-------YLK-------S---KN--K--EPLSEQQRLSIA----------------------IQIAEALSYL 119 (259)
T ss_dssp -TTEBHHH-------HHH-------H---TC--T--TTSBHHHHHHHH----------------------HHHHHHHHHH
T ss_pred cccccccc-------ccc-------c---cc--c--cccccccccccc----------------------cccccccccc
Confidence 98755431 011 1 00 0 011111111111 1222233333
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
.+ . .++|+|+.+.||++++ ++.+.|-||.++...
T Consensus 120 h~----~----~iiH~~l~~~nill~~-~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 120 HS----N----NIIHGNLSPSNILLDS-NGQVKLSDFGLSRPI 153 (259)
T ss_dssp HH----T----TEEEST-SGGGEEEET-TTEEEEESTTTGEET
T ss_pred cc----c----cccccccccccccccc-ccccccccccccccc
Confidence 22 1 3899999999999985 678999999876543
No 380
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=95.58 E-value=0.13 Score=48.38 Aligned_cols=29 Identities=21% Similarity=0.422 Sum_probs=25.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|+||++++ ++.+.+.||+.+.
T Consensus 121 ~ivH~dlk~~Nili~~-~~~~kl~d~~~~~ 149 (314)
T cd08216 121 GFIHRSVKASHILLSG-DGKVVLSGLRYSV 149 (314)
T ss_pred CeecCCCCcceEEEec-CCceEEecCccce
Confidence 5899999999999985 6789999998764
No 381
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.49 E-value=0.22 Score=47.42 Aligned_cols=64 Identities=19% Similarity=0.062 Sum_probs=42.0
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcc-cchHHHHHHHHHHHh-C--CCCceEEEEe
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIV-INRQRELQAIKYLSA-A--GFGAKLLAVF 130 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~-idr~~E~~~l~~l~~-~--gl~P~~~~~~ 130 (382)
....|..|..+.+|.+...... ...+++|+-....... -....|..++..+.. . .-.|.++...
T Consensus 22 i~~~iG~G~fG~V~~v~~~~~~--~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G 89 (322)
T KOG1164|consen 22 LGKKIGEGGFGAVYLVSDKSEK--NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHG 89 (322)
T ss_pred EeeeccccCCceEEEEEecCCC--CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEec
Confidence 3467888999999999876531 2368888765432211 134689999998885 2 2347777665
No 382
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=95.48 E-value=0.038 Score=52.29 Aligned_cols=40 Identities=23% Similarity=0.275 Sum_probs=31.6
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHh
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGN 269 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~ 269 (382)
..++|+|++|.|||++. +|-+.|-||..|..+--.-|-..
T Consensus 144 ~gIiyRDlKPENILLd~-~GHi~LtDFgL~k~~~~~~~~t~ 183 (357)
T KOG0598|consen 144 KGIIYRDLKPENILLDE-QGHIKLTDFGLCKEDLKDGDATR 183 (357)
T ss_pred CCeeeccCCHHHeeecC-CCcEEEeccccchhcccCCCccc
Confidence 47899999999999975 78899999998876544433333
No 383
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=95.45 E-value=0.15 Score=46.73 Aligned_cols=29 Identities=24% Similarity=0.365 Sum_probs=25.1
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.|||+++ ++.+.++||..+.
T Consensus 119 ~i~H~dikp~nil~~~-~~~~~l~Dfg~~~ 147 (268)
T cd05086 119 NFLHSDLALRNCFLTS-DLTVKVGDYGIGP 147 (268)
T ss_pred CeeccCCccceEEEcC-CccEEeccccccc
Confidence 4799999999999975 6789999998764
No 384
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=95.44 E-value=0.26 Score=45.53 Aligned_cols=30 Identities=20% Similarity=0.397 Sum_probs=25.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||..+..
T Consensus 129 ~iiH~dlkp~nili~~-~~~~kl~Dfg~~~~ 158 (279)
T cd05111 129 RMVHRNLAARNILLKS-DSIVQIADFGVADL 158 (279)
T ss_pred CEeccccCcceEEEcC-CCcEEEcCCcccee
Confidence 4899999999999975 67899999987753
No 385
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.42 E-value=0.057 Score=52.52 Aligned_cols=135 Identities=24% Similarity=0.331 Sum_probs=77.6
Q ss_pred eEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHH--HHhC---CC----------CceEEE
Q 016788 64 FSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKY--LSAA---GF----------GAKLLA 128 (382)
Q Consensus 64 ~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~--l~~~---gl----------~P~~~~ 128 (382)
.-++.|..|-...||+-.-.++ .+-||++....+..- .+|.++++. |... |+ --+++-
T Consensus 214 ~L~e~IGkGRyGEVwrG~wrGe-----~VAVKiF~srdE~SW--frEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 214 VLQEIIGKGRFGEVWRGRWRGE-----DVAVKIFSSRDERSW--FRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred EEEEEecCccccceeeccccCC-----ceEEEEecccchhhh--hhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 4456778898999999877766 699999987655432 355555543 2221 11 012211
Q ss_pred E---eCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccc
Q 016788 129 V---FGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYET 205 (382)
Q Consensus 129 ~---~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (382)
. .++|.+++|+.-.+++.+.+ -.++.++|.-|+.||.
T Consensus 287 vTdYHe~GSL~DyL~r~tv~~~~m--l~LalS~AsGLaHLH~-------------------------------------- 326 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNRNTVTTEGM--LKLALSIASGLAHLHM-------------------------------------- 326 (513)
T ss_pred eeecccCCcHHHHHhhccCCHHHH--HHHHHHHhhhHHHHHH--------------------------------------
Confidence 1 13444444444444443322 1223344444444443
Q ss_pred cCHHHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 206 ISFKEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 206 ~~~~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
++ -....++.+.|+|+++.||||.+ ++...|=|...|-.-
T Consensus 327 --------eI-------~GTqgKPaIAHRDlKSKNILVKk-n~~C~IADLGLAv~h 366 (513)
T KOG2052|consen 327 --------EI-------VGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRH 366 (513)
T ss_pred --------HH-------hcCCCCchhhccccccccEEEcc-CCcEEEeeceeeEEe
Confidence 11 11235568899999999999975 677888898877543
No 386
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=95.38 E-value=0.15 Score=49.89 Aligned_cols=142 Identities=17% Similarity=0.260 Sum_probs=82.1
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC----CcccchHHHHHHHHHHHhCCCCceEEEEeC--Cc--eEEEe
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT----DIVINRQRELQAIKYLSAAGFGAKLLAVFG--NG--MVQSF 138 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~----~~~idr~~E~~~l~~l~~~gl~P~~~~~~~--~g--~i~e~ 138 (382)
..+..|....+|++..... +..+-+|+-.+.. ...-+..+|..+++.|+.+.-.-.++..++ +. +|+|.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~t---g~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL 117 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKST---GKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMEL 117 (382)
T ss_pred hhhCCCCceEEEEEEecCC---CceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEe
Confidence 4677888889999987653 1356665543321 112355789999999976322234444443 22 68999
Q ss_pred ecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHH
Q 016788 139 INARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVEL 218 (382)
Q Consensus 139 i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 218 (382)
++|..| ...+.+. | ... . . .... ...+.+.+..+
T Consensus 118 ~~GGeL----------fd~i~~~----~-~sE-----~---d-a~~~----------------------~~~il~av~~l 151 (382)
T KOG0032|consen 118 CEGGEL----------FDRIVKK----H-YSE-----R---D-AAGI----------------------IRQILEAVKYL 151 (382)
T ss_pred cCCchH----------HHHHHHc----c-CCH-----H---H-HHHH----------------------HHHHHHHHHHH
Confidence 986432 2222222 2 110 0 0 0000 11222333332
Q ss_pred HHHhcccCCCeeeeccCCCCCceeeeCCC---CCEEEEEeecCCCCCchh
Q 016788 219 KELAGHLNAPVVFSHNDLLSGNIMVNDEQ---EKLYLIDFEYGSYNYRGY 265 (382)
Q Consensus 219 ~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~---~~~~lIDfE~a~~~~~~~ 265 (382)
. ...++|.|+.|.|+|+.... +.+.++||..|.+..+..
T Consensus 152 H--------~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~ 193 (382)
T KOG0032|consen 152 H--------SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE 193 (382)
T ss_pred H--------hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc
Confidence 2 26899999999999986432 379999999998877633
No 387
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=95.36 E-value=0.087 Score=50.16 Aligned_cols=29 Identities=31% Similarity=0.457 Sum_probs=25.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.|.||..+.
T Consensus 127 ~ivH~dlkp~Nil~~~-~~~~kl~dfg~~~ 155 (334)
T cd07855 127 NVIHRDLKPSNLLVNE-DCELRIGDFGMAR 155 (334)
T ss_pred CeecCCCCHHHEEEcC-CCcEEecccccce
Confidence 5899999999999975 6889999999764
No 388
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=95.34 E-value=0.014 Score=57.09 Aligned_cols=144 Identities=18% Similarity=0.246 Sum_probs=83.5
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHH-----------HHh--CCC--C--ceEEEE
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKY-----------LSA--AGF--G--AKLLAV 129 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~-----------l~~--~gl--~--P~~~~~ 129 (382)
+.+..|--..||+-...+. .+-||++...... +..+|..++.. +.. .|- . +-++-.
T Consensus 216 eli~~Grfg~V~KaqL~~~-----~VAVKifp~~~kq--s~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLDNR-----LVAVKIFPEQEKQ--SFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred HHhhcCccceeehhhccCc-----eeEEEecCHHHHH--HHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 3456788889999888775 6889999764322 23466655432 211 110 1 111111
Q ss_pred -eCCceEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCH
Q 016788 130 -FGNGMVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISF 208 (382)
Q Consensus 130 -~~~g~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (382)
.+.|.+.+|+.+.+++..++. .++..+++-|+-||.-..
T Consensus 289 fh~kGsL~dyL~~ntisw~~~c--ria~SmarGLa~LHee~p-------------------------------------- 328 (534)
T KOG3653|consen 289 FHPKGSLCDYLKANTISWNSLC--RIAESMARGLAHLHEELP-------------------------------------- 328 (534)
T ss_pred eccCCcHHHHHHhccccHHHHH--HHHHHHHHHHHHhcccCC--------------------------------------
Confidence 234555555555555443321 234555555555554111
Q ss_pred HHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhh
Q 016788 209 KEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFS 272 (382)
Q Consensus 209 ~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~ 272 (382)
.....++.+.|+|+++.|||+.. +....|=||..|..-+|..--+....
T Consensus 329 --------------~~d~~Kp~IaHRDlkSkNVLvK~-DlTccIaDFGLAl~~~p~~~~~d~~~ 377 (534)
T KOG3653|consen 329 --------------RGDHHKPPIAHRDLKSKNVLVKN-DLTCCIADFGLALRLEPGKPQGDTHG 377 (534)
T ss_pred --------------cCCCCCCccccccccccceEEcc-CCcEEeeccceeEEecCCCCCcchhh
Confidence 01234568899999999999974 68889999999876555554444433
No 389
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=95.27 E-value=0.29 Score=44.96 Aligned_cols=29 Identities=14% Similarity=0.284 Sum_probs=25.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 137 ~i~H~di~p~nil~~~-~~~~kl~d~g~~~ 165 (280)
T cd05043 137 GVIHKDIAARNCVIDE-ELQVKITDNALSR 165 (280)
T ss_pred CEeecccCHhhEEEcC-CCcEEECCCCCcc
Confidence 6899999999999975 6789999999875
No 390
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=95.26 E-value=0.11 Score=49.54 Aligned_cols=30 Identities=27% Similarity=0.393 Sum_probs=26.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||+++. ++.+.|+||..+..
T Consensus 128 ~i~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~ 157 (337)
T cd07858 128 NVLHRDLKPSNLLLNA-NCDLKICDFGLART 157 (337)
T ss_pred CEecCCCCHHHEEEcC-CCCEEECcCccccc
Confidence 5899999999999975 67899999998764
No 391
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=95.21 E-value=0.15 Score=48.86 Aligned_cols=30 Identities=33% Similarity=0.525 Sum_probs=26.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||+.+..
T Consensus 137 ~i~H~dlkp~NIll~~-~~~~kL~dfg~~~~ 166 (342)
T cd07879 137 GIIHRDLKPGNLAVNE-DCELKILDFGLARH 166 (342)
T ss_pred CcccCCCCHHHEEECC-CCCEEEeeCCCCcC
Confidence 5799999999999975 68899999997754
No 392
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=95.17 E-value=0.13 Score=47.01 Aligned_cols=31 Identities=19% Similarity=0.142 Sum_probs=23.3
Q ss_pred eeeeccCCCCCceeeeCCCC------CEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQE------KLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~------~~~lIDfE~a~ 259 (382)
..++|+|++|.|||++.++. .+.++||..+.
T Consensus 124 ~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 124 KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred CCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence 36899999999999974221 27888988654
No 393
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=95.14 E-value=0.2 Score=48.63 Aligned_cols=71 Identities=13% Similarity=0.127 Sum_probs=43.5
Q ss_pred ecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc---ccchHHHHHHHHHHHhCCCCceEEEEe--CC---ceEEEeec
Q 016788 69 VSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI---VINRQRELQAIKYLSAAGFGAKLLAVF--GN---GMVQSFIN 140 (382)
Q Consensus 69 l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~---~idr~~E~~~l~~l~~~gl~P~~~~~~--~~---g~i~e~i~ 140 (382)
+..|....+|+....+.. .+.+|+....... .-+..+|+.++..|...++. +++|.. +. ++|+||++
T Consensus 49 iG~G~~g~V~~~~~~g~~----~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV-~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWRGTD----VVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIV-QFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred cccCCceeEEEEEeCCce----eEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCee-eEEEEEcCCCCceEEEEEeCC
Confidence 556777889988776542 2778877654211 11335677777765544433 255554 22 47999999
Q ss_pred CCcC
Q 016788 141 ARTL 144 (382)
Q Consensus 141 G~~l 144 (382)
|..|
T Consensus 124 ~GsL 127 (362)
T KOG0192|consen 124 GGSL 127 (362)
T ss_pred CCcH
Confidence 8655
No 394
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.12 E-value=0.035 Score=55.38 Aligned_cols=27 Identities=33% Similarity=0.492 Sum_probs=23.8
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeec
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEY 257 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~ 257 (382)
-.++|.||+|.|+|+- .|.+.||||.-
T Consensus 479 ~gIVHSDLKPANFLlV--kG~LKLIDFGI 505 (677)
T KOG0596|consen 479 HGIVHSDLKPANFLLV--KGRLKLIDFGI 505 (677)
T ss_pred hceeecCCCcccEEEE--eeeEEeeeech
Confidence 3789999999999986 58999999983
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=95.07 E-value=0.012 Score=51.60 Aligned_cols=33 Identities=24% Similarity=0.482 Sum_probs=29.0
Q ss_pred CCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 227 APVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 227 ~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..+.++|+|.+|+|||++- +|.+.+-||.-+|+
T Consensus 166 ~kL~vIHRDvKPsNiLIn~-~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 166 SKLSVIHRDVKPSNILINY-DGQVKICDFGISGY 198 (282)
T ss_pred HHhhhhhccCCcceEEEcc-CCcEEEccccccee
Confidence 4457899999999999985 78999999998876
No 396
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.89 E-value=0.082 Score=52.76 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=31.6
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhh
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYD 266 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~D 266 (382)
..++|.|++.+|||... ++.+.|.||.+|......-+
T Consensus 388 ~gIiHrDIKSDnILL~~-~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 388 RGIIHRDIKSDNILLTM-DGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred cceeeeccccceeEecc-CCcEEEeeeeeeeccccccC
Confidence 47899999999999975 67899999999987666554
No 397
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=94.84 E-value=0.2 Score=47.45 Aligned_cols=26 Identities=19% Similarity=0.456 Sum_probs=22.2
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEee
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFE 256 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE 256 (382)
.++|+|++|.||+++. ++.+.+.|+.
T Consensus 121 ~iiH~dlkp~Nil~~~-~~~~~l~~~~ 146 (327)
T cd08227 121 GYVHRSVKASHILISV-DGKVYLSGLR 146 (327)
T ss_pred CEecCCCChhhEEEec-CCcEEEcccc
Confidence 5899999999999975 5778888875
No 398
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=94.82 E-value=0.039 Score=52.92 Aligned_cols=30 Identities=33% Similarity=0.470 Sum_probs=26.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 138 gi~H~dlkp~Nill~~-~~~~kL~dfg~~~~ 167 (343)
T cd07851 138 GIIHRDLKPSNIAVNE-DCELKILDFGLARH 167 (343)
T ss_pred CeecCCCCHHHeEECC-CCCEEEcccccccc
Confidence 5899999999999975 67899999998754
No 399
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=94.64 E-value=0.12 Score=47.72 Aligned_cols=29 Identities=17% Similarity=0.165 Sum_probs=21.7
Q ss_pred eeeccCCCCCceeeeCCC------CCEEEEEeecC
Q 016788 230 VFSHNDLLSGNIMVNDEQ------EKLYLIDFEYG 258 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~------~~~~lIDfE~a 258 (382)
.++|+|++|.||++++.+ ..+.+.||..+
T Consensus 137 ~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~ 171 (274)
T cd05076 137 NLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVS 171 (274)
T ss_pred CccCCCCCcccEEEeccCcccCccceeeecCCccc
Confidence 579999999999996421 13677888754
No 400
>COG3281 Ble Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]
Probab=94.59 E-value=0.055 Score=51.05 Aligned_cols=44 Identities=25% Similarity=0.363 Sum_probs=34.3
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeec---------CCCCCchhhHHhhhhhc
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEY---------GSYNYRGYDIGNHFSEY 274 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~---------a~~~~~~~Dla~~~~e~ 274 (382)
..=+|||||.|.+|+.+ +...+||||- -....|.-|+|.++..+
T Consensus 284 l~RvHGDLHLgQVLvt~--g~~~liDFEGEPsRpl~err~~~sPlrDvAgllRS~ 336 (438)
T COG3281 284 LQRVHGDLHLGQVLVTP--GRALLIDFEGEPSRPLDERRAPDSPLRDVAGLLRSF 336 (438)
T ss_pred HHHHhccceehheeeeC--CcEEEEecCCCCCCChhhccCCCCchHHHHHHHHHh
Confidence 34589999999999974 7899999983 22356788888877653
No 401
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=94.58 E-value=0.44 Score=45.61 Aligned_cols=30 Identities=30% Similarity=0.461 Sum_probs=26.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||..+..
T Consensus 140 ~ivH~dlkp~NIll~~-~~~~kl~dfg~~~~ 169 (345)
T cd07877 140 DIIHRDLKPSNLAVNE-DCELKILDFGLARH 169 (345)
T ss_pred CeeecCCChHHEEEcC-CCCEEEeccccccc
Confidence 5899999999999975 67899999987654
No 402
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.53 E-value=0.3 Score=50.05 Aligned_cols=153 Identities=16% Similarity=0.196 Sum_probs=90.6
Q ss_pred CCeEE-EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC----cccchHHHHHHHHHHHhCCCCceEEEEeCCc---
Q 016788 62 SRFSV-DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD----IVINRQRELQAIKYLSAAGFGAKLLAVFGNG--- 133 (382)
Q Consensus 62 ~~~~i-~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~----~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g--- 133 (382)
+++.+ ..|..|.-..|++.+..+.. .-|-+|+-.++.- ..-....|.+++..+.++-+--.++..|..-
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~---e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTN---EYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCC---cEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34444 56678888899999886542 4677888766531 1112357888888887554445666666432
Q ss_pred -eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHH
Q 016788 134 -MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQ 212 (382)
Q Consensus 134 -~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (382)
.||||+.|..+-.- .....-.++ +. .|+. ..+.
T Consensus 445 ~fvmey~~Ggdm~~~--------------------~~~~~F~e~----ra-rfya---------------------Aev~ 478 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHH--------------------IHTDVFSEP----RA-RFYA---------------------AEVV 478 (694)
T ss_pred EEEEEecCCCcEEEE--------------------EecccccHH----HH-HHHH---------------------HHHH
Confidence 49999988543211 000000000 00 1110 1111
Q ss_pred HHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhh
Q 016788 213 KEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFS 272 (382)
Q Consensus 213 ~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~ 272 (382)
-.++.|. ...++++|++.+|||++. +|-+.|.||..|.-|--.-|-+..||
T Consensus 479 l~L~fLH--------~~~IIYRDlKLdNiLLD~-eGh~kiADFGlcKe~m~~g~~TsTfC 529 (694)
T KOG0694|consen 479 LGLQFLH--------ENGIIYRDLKLDNLLLDT-EGHVKIADFGLCKEGMGQGDRTSTFC 529 (694)
T ss_pred HHHHHHH--------hcCceeeecchhheEEcc-cCcEEecccccccccCCCCCcccccc
Confidence 1222232 247899999999999986 68899999999976654445555544
No 403
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=94.51 E-value=0.41 Score=43.28 Aligned_cols=71 Identities=13% Similarity=0.114 Sum_probs=46.3
Q ss_pred eEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC-ceEEEEeCCc----eEEEe
Q 016788 64 FSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG-AKLLAVFGNG----MVQSF 138 (382)
Q Consensus 64 ~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~-P~~~~~~~~g----~i~e~ 138 (382)
.-|.+|..|.-..+|.-..-.. +..+-+|+-.+...+. ....|..+.+.|.. |++ |.+..+..++ +|++-
T Consensus 18 ~lvrkiGsGSFGdIy~~~~i~~---ge~VAiK~Es~~a~hp-qL~yEskvY~iL~~-g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 18 KLVRKIGSGSFGDIYLGISITS---GEEVAIKLESSKAKHP-QLLYESKVYRILQG-GVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred EEEEeecCCchhheeeeeeccC---CceEEEEeecccCCCc-chhHHHHHHHHhcc-CCCCchhhhhccccccceeeeec
Confidence 4578888888888887644321 2479999987654331 33578899888864 454 7777665332 56655
Q ss_pred e
Q 016788 139 I 139 (382)
Q Consensus 139 i 139 (382)
+
T Consensus 93 L 93 (341)
T KOG1163|consen 93 L 93 (341)
T ss_pred c
Confidence 4
No 404
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=94.48 E-value=0.046 Score=55.28 Aligned_cols=36 Identities=31% Similarity=0.350 Sum_probs=30.3
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCch
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~ 264 (382)
..++|+||+|+|||+.++.+.+.++||.++....+.
T Consensus 434 ~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 434 QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred cCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 689999999999999434678999999998776655
No 405
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=94.27 E-value=0.071 Score=48.47 Aligned_cols=30 Identities=27% Similarity=0.329 Sum_probs=25.3
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|+.|.||+++ ++.+.++||..+..
T Consensus 125 ~~i~h~~l~~~nili~--~~~~~l~d~g~~~~ 154 (260)
T cd08222 125 RRILHRDLKAKNIFLK--NNLLKIGDFGVSRL 154 (260)
T ss_pred cCccccCCChhheEee--cCCEeecccCceee
Confidence 4789999999999996 36799999997644
No 406
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=94.20 E-value=0.029 Score=52.80 Aligned_cols=30 Identities=27% Similarity=0.377 Sum_probs=26.8
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..++|+|++|.|||+++ .+.+.++||.-|.
T Consensus 139 ~~IlHRDLKPQNlLi~~-~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 139 HGILHRDLKPQNLLISS-SGVLKLADFGLAR 168 (323)
T ss_pred CCeecccCCcceEEECC-CCcEeeeccchHH
Confidence 47899999999999986 7899999999765
No 407
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=94.12 E-value=0.1 Score=52.74 Aligned_cols=34 Identities=29% Similarity=0.377 Sum_probs=28.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCCCch
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~ 264 (382)
-++|.||+..||++++ +++|.|=||..++.--+.
T Consensus 508 ~IIHrDLKSnNIFl~~-~~kVkIgDFGLatvk~~w 541 (678)
T KOG0193|consen 508 NIIHRDLKSNNIFLHE-DLKVKIGDFGLATVKTRW 541 (678)
T ss_pred hhhhhhccccceEEcc-CCcEEEecccceeeeeee
Confidence 6799999999999985 689999999988764443
No 408
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=94.12 E-value=0.7 Score=46.79 Aligned_cols=143 Identities=17% Similarity=0.215 Sum_probs=80.2
Q ss_pred CeEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC---------cccchHHHHHHHHHHHhCCCC--ceEEEEeC
Q 016788 63 RFSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD---------IVINRQRELQAIKYLSAAGFG--AKLLAVFG 131 (382)
Q Consensus 63 ~~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~---------~~idr~~E~~~l~~l~~~gl~--P~~~~~~~ 131 (382)
-.+++++..|-...+..+...... ..+|+|.-.+..- .+-..-.|+++|..|.++..+ -|++.+|+
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~---~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENN---YEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred ceeeeeccccccceEEEeeecccc---eEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 457889999988888888776542 4677776543210 011124688888888765432 46666664
Q ss_pred C-c--eEEEeecCCcCCccccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCH
Q 016788 132 N-G--MVQSFINARTLTPADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISF 208 (382)
Q Consensus 132 ~-g--~i~e~i~G~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (382)
+ + .+..=..|..++. ++|++.-..+ .. .. .
T Consensus 640 ddd~yyl~te~hg~gIDL------------------------------------Fd~IE~kp~m--~E--~e-------A 672 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDL------------------------------------FDFIEFKPRM--DE--PE-------A 672 (772)
T ss_pred cCCeeEEEecCCCCCcch------------------------------------hhhhhccCcc--ch--HH-------H
Confidence 3 3 2333333433221 2233222111 00 00 0
Q ss_pred HHHHHHHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 209 KEVQKEIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 209 ~~l~~~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..+ +..+.... ..-....++|+|++-.|++++. +|-+.+|||.-|.+
T Consensus 673 k~I---FkQV~agi-~hlh~~~ivhrdikdenvivd~-~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 673 KLI---FKQVVAGI-KHLHDQGIVHRDIKDENVIVDS-NGFVKLIDFGSAAY 719 (772)
T ss_pred HHH---HHHHHhcc-ccccccCceecccccccEEEec-CCeEEEeeccchhh
Confidence 001 11111111 1234568999999999999975 78899999997765
No 409
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=94.01 E-value=0.13 Score=46.91 Aligned_cols=30 Identities=17% Similarity=0.325 Sum_probs=23.2
Q ss_pred eeeccCCCCCceeeeCCCCC-------EEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEK-------LYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~-------~~lIDfE~a~ 259 (382)
.++|+|++|.||++++++.. +.+.||..+.
T Consensus 120 ~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 120 GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 68999999999999753322 6788887653
No 410
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=94.01 E-value=0.24 Score=49.10 Aligned_cols=31 Identities=26% Similarity=0.437 Sum_probs=27.2
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+||-..||||++ +..+.|=||..|..
T Consensus 322 ~~~IHRDLAARNiLV~~-~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 322 KNYIHRDLAARNILVDE-DLVVKISDFGLARL 352 (468)
T ss_pred CCccchhhhhhheeecc-CceEEEcccccccc
Confidence 37899999999999975 67899999998873
No 411
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=93.94 E-value=0.61 Score=49.23 Aligned_cols=76 Identities=17% Similarity=0.228 Sum_probs=52.5
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEe----CC-c----eEEE
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVF----GN-G----MVQS 137 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~----~~-g----~i~e 137 (382)
..+..|....+|++..... ++-..+||-....+.-...+.|+.+++.++.+.-.++.|+.+ ++ | +|+|
T Consensus 25 evig~Gtygkv~k~k~~~~---~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVME 101 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKT---GQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVME 101 (953)
T ss_pred EEEeeccceeEEEEeeeec---CceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEee
Confidence 4556677778999876543 235778887665544334577888999888877778888764 22 2 6999
Q ss_pred eecCCcCC
Q 016788 138 FINARTLT 145 (382)
Q Consensus 138 ~i~G~~l~ 145 (382)
|+.|-.++
T Consensus 102 fC~gGSVT 109 (953)
T KOG0587|consen 102 FCGGGSVT 109 (953)
T ss_pred ccCCccHH
Confidence 99886543
No 412
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.89 E-value=0.26 Score=46.65 Aligned_cols=37 Identities=19% Similarity=0.405 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHhCCCC-ceEEEEeCCceEEEeecCCcC
Q 016788 108 QRELQAIKYLSAAGFG-AKLLAVFGNGMVQSFINARTL 144 (382)
Q Consensus 108 ~~E~~~l~~l~~~gl~-P~~~~~~~~g~i~e~i~G~~l 144 (382)
+.|...|..+...|++ |.++..-.+-+|+.||....+
T Consensus 333 EkEmhNL~RMq~~GlpcP~vV~lkkhvLVMsFiGd~~~ 370 (531)
T KOG2269|consen 333 EKEMHNLSRMQKHGLPCPQVVKLKKHVLVMSFIGDQGL 370 (531)
T ss_pred HHHHHHHHHHHhcCCCCCceeeeecceEEEEeecCCCC
Confidence 4566677788889997 999888888899999955433
No 413
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=93.75 E-value=0.04 Score=55.91 Aligned_cols=32 Identities=25% Similarity=0.471 Sum_probs=28.1
Q ss_pred CCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 227 APVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 227 ~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
...+|+|+|++|+|||++. +|-+.|-||..|.
T Consensus 746 HkmGFIHRDiKPDNILIDr-dGHIKLTDFGLCT 777 (1034)
T KOG0608|consen 746 HKMGFIHRDIKPDNILIDR-DGHIKLTDFGLCT 777 (1034)
T ss_pred HhccceecccCccceEEcc-CCceeeeeccccc
Confidence 4579999999999999975 7889999999763
No 414
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=93.73 E-value=0.51 Score=47.71 Aligned_cols=31 Identities=26% Similarity=0.434 Sum_probs=26.2
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+||+.||+++++ +-.|.|=||..|..
T Consensus 137 ~~IiHRDLKLGNlfL~~-~~~VKIgDFGLAt~ 167 (592)
T KOG0575|consen 137 LGIIHRDLKLGNLFLNE-NMNVKIGDFGLATQ 167 (592)
T ss_pred cCceecccchhheeecC-cCcEEecccceeee
Confidence 36899999999999974 56799999997754
No 415
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=93.44 E-value=0.054 Score=49.65 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=28.9
Q ss_pred CCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 226 NAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 226 ~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...-.++|+|.+|.|||+++ .|.+.|-||.-+|.
T Consensus 208 KeKH~viHRDvKPSNILlDe-~GniKlCDFGIsGr 241 (391)
T KOG0983|consen 208 KEKHGVIHRDVKPSNILLDE-RGNIKLCDFGISGR 241 (391)
T ss_pred HHhcceeecccCccceEEcc-CCCEEeecccccce
Confidence 34568999999999999975 78999999987764
No 416
>PHA02882 putative serine/threonine kinase; Provisional
Probab=93.37 E-value=0.049 Score=50.90 Aligned_cols=29 Identities=38% Similarity=0.628 Sum_probs=25.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.|||+++ ++.+.|+||..|.
T Consensus 146 ~iiHrDiKp~Nill~~-~~~~~l~DFGla~ 174 (294)
T PHA02882 146 GISHGDIKPENIMVDG-NNRGYIIDYGIAS 174 (294)
T ss_pred CeecCCCCHHHEEEcC-CCcEEEEEcCCce
Confidence 6899999999999975 6789999999774
No 417
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=92.72 E-value=1.9 Score=43.82 Aligned_cols=44 Identities=23% Similarity=0.591 Sum_probs=34.5
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhhhhcCc
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHFSEYAG 276 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~~e~~~ 276 (382)
...+||+||+..|+|++. +-.+.|-||+++.. ||.+.++..|+|
T Consensus 173 ~k~ivHrdLk~eNilL~~-~mnikIaDfgfS~~----~~~~~~lqt~cg 216 (596)
T KOG0586|consen 173 SKNIVHRDLKAENILLDE-NMNIKIADFGFSTF----FDYGLMLQTFCG 216 (596)
T ss_pred hcceeccccchhhccccc-ccceeeecccccee----ecccccccccCC
Confidence 348999999999999974 55699999999874 556666666653
No 418
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=92.67 E-value=0.066 Score=55.25 Aligned_cols=30 Identities=20% Similarity=0.351 Sum_probs=26.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.|||++++++.+.|+||..|.
T Consensus 275 gIiHRDLKP~NILl~~~~~~~KL~DFGlA~ 304 (566)
T PLN03225 275 GIVHRDVKPQNIIFSEGSGSFKIIDLGAAA 304 (566)
T ss_pred CEEeCcCCHHHEEEeCCCCcEEEEeCCCcc
Confidence 699999999999998545789999999885
No 419
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=92.64 E-value=0.13 Score=55.43 Aligned_cols=30 Identities=30% Similarity=0.573 Sum_probs=24.0
Q ss_pred eeeeccCCCCCceeeeC------CCCCEEEEEeecC
Q 016788 229 VVFSHNDLLSGNIMVND------EQEKLYLIDFEYG 258 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~------~~~~~~lIDfE~a 258 (382)
..++|||++|+|+|+.. +...++||||.++
T Consensus 813 ~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~s 848 (974)
T KOG1166|consen 813 MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRS 848 (974)
T ss_pred cceecccCCcceeEeecccCCCCcccceEEEecccc
Confidence 47899999999999842 2346999999863
No 420
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=92.59 E-value=0.1 Score=47.82 Aligned_cols=41 Identities=22% Similarity=0.355 Sum_probs=35.4
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHhhh
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGNHF 271 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~~~ 271 (382)
-++|.||+|.|||.++ +..+.|-||.+|+--.|+--|-.++
T Consensus 143 ~IVHRDLKpENILldd-n~~i~isDFGFa~~l~~GekLrelC 183 (411)
T KOG0599|consen 143 NIVHRDLKPENILLDD-NMNIKISDFGFACQLEPGEKLRELC 183 (411)
T ss_pred hhhhcccChhheeecc-ccceEEeccceeeccCCchhHHHhc
Confidence 5789999999999975 6789999999999888887777653
No 421
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=92.32 E-value=2.9 Score=39.54 Aligned_cols=27 Identities=11% Similarity=0.286 Sum_probs=22.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeec
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEY 257 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~ 257 (382)
.++|+|++|.||+++. ++.+.+.||..
T Consensus 121 ~ivHrDlkp~Nill~~-~~~~~~~~~~~ 147 (328)
T cd08226 121 GYIHRNIKASHILISG-DGLVSLSGLSH 147 (328)
T ss_pred CeecCCCCHHHEEEeC-CCcEEEechHH
Confidence 6899999999999975 57788888753
No 422
>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function.
Probab=92.28 E-value=0.11 Score=50.86 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=50.2
Q ss_pred cCCCeeeeccCCCCCcee-eeCCCCCE--EEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCC---HHHHHHHHHHhc
Q 016788 225 LNAPVVFSHNDLLSGNIM-VNDEQEKL--YLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPN---KDEQNHFFRHYL 298 (382)
Q Consensus 225 ~~~~~vl~H~Dl~~~NiL-~~~~~~~~--~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~---~~~~~~fl~~Y~ 298 (382)
...+.|+++||+|.+|+= +.+.++.+ -+=|||-+.+||+.|||-.+.....- ......++. .+....|+++|.
T Consensus 39 ~~~~~v~icGD~Hl~NFG~~~~~~~~~vFdiNDFDEa~~gp~~wDl~Rla~Si~l-aa~~~gl~~~~~~~~~~~~~~~Y~ 117 (385)
T PF10009_consen 39 PSGPPVWICGDAHLENFGAFASPEGRVVFDINDFDEALPGPFEWDLKRLATSIVL-AARENGLSDKDARKAVRAFLEGYR 117 (385)
T ss_pred CCCCceEEeccchhhccCcccCCCCCEEecCCCCCcCCcCChHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHH
Confidence 456789999999999994 44334443 45699999999999999887655430 011112222 234678888887
Q ss_pred C
Q 016788 299 R 299 (382)
Q Consensus 299 ~ 299 (382)
.
T Consensus 118 ~ 118 (385)
T PF10009_consen 118 E 118 (385)
T ss_pred H
Confidence 5
No 423
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=91.90 E-value=0.19 Score=48.57 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=29.0
Q ss_pred CCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 227 APVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 227 ~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
....++|.|++|+|+|++...++-.||||..|.
T Consensus 149 h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 149 HKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred hccCccccCCCccccccccccCCceEEechhHH
Confidence 456899999999999998766788999999887
No 424
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=91.89 E-value=0.14 Score=47.19 Aligned_cols=30 Identities=23% Similarity=0.275 Sum_probs=25.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 144 gi~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~ 173 (283)
T cd05091 144 HVVHKDLATRNVLVFD-KLNVKISDLGLFRE 173 (283)
T ss_pred CccccccchhheEecC-CCceEecccccccc
Confidence 5899999999999975 67799999997653
No 425
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=91.84 E-value=1.1 Score=49.27 Aligned_cols=71 Identities=15% Similarity=0.258 Sum_probs=41.7
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCC--c--eEEEeecCC
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGN--G--MVQSFINAR 142 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~--g--~i~e~i~G~ 142 (382)
..+..|....+|++..... +..+++|....... ....|.+.++.+...+ ..++++.+.+ . +|+||++|.
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~---~~~~~~~~l~~l~Hpn-Iv~~~~~~~~~~~~~lv~Ey~~~g 768 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKN---GMQFVVKEINDVNS---IPSSEIADMGKLQHPN-IVKLIGLCRSEKGAYLIHEYIEGK 768 (968)
T ss_pred cEEccCCCeeEEEEEECCC---CcEEEEEEccCCcc---ccHHHHHHHhhCCCCC-cceEEEEEEcCCCCEEEEeCCCCC
Confidence 3566777789999986432 13688887643221 1134555555553222 2567776532 2 699999986
Q ss_pred cC
Q 016788 143 TL 144 (382)
Q Consensus 143 ~l 144 (382)
.+
T Consensus 769 ~L 770 (968)
T PLN00113 769 NL 770 (968)
T ss_pred cH
Confidence 55
No 426
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=91.65 E-value=0.1 Score=49.91 Aligned_cols=30 Identities=30% Similarity=0.469 Sum_probs=26.3
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 138 ~ivHrdikp~Nil~~~-~~~~kl~Dfg~~~~ 167 (343)
T cd07878 138 GIIHRDLKPSNVAVNE-DCELRILDFGLARQ 167 (343)
T ss_pred CeecccCChhhEEECC-CCCEEEcCCcccee
Confidence 6899999999999975 67899999997754
No 427
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=91.35 E-value=0.31 Score=45.45 Aligned_cols=30 Identities=23% Similarity=0.410 Sum_probs=26.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
-.+|+|++|.|||+.. .+.+.+-||.+|..
T Consensus 121 n~IHRDIKPENILit~-~gvvKLCDFGFAR~ 150 (396)
T KOG0593|consen 121 NCIHRDIKPENILITQ-NGVVKLCDFGFART 150 (396)
T ss_pred CeecccCChhheEEec-CCcEEeccchhhHh
Confidence 4899999999999985 78999999999853
No 428
>PHA03210 serine/threonine kinase US3; Provisional
Probab=91.31 E-value=0.11 Score=52.91 Aligned_cols=29 Identities=31% Similarity=0.366 Sum_probs=25.8
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 287 gIiHrDLKP~NILl~~-~~~vkL~DFGla~ 315 (501)
T PHA03210 287 KLIHRDIKLENIFLNC-DGKIVLGDFGTAM 315 (501)
T ss_pred CeecCCCCHHHEEECC-CCCEEEEeCCCce
Confidence 6899999999999975 6789999998874
No 429
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=91.29 E-value=0.67 Score=46.41 Aligned_cols=32 Identities=22% Similarity=0.393 Sum_probs=26.2
Q ss_pred eeeeccCCCCCceeeeCCC--CCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQ--EKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~--~~~~lIDfE~a~~ 260 (382)
..++|+||+|.|||+.+.+ -.+.|-||.||.+
T Consensus 683 knIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 683 KNIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred cceeeccCCchheeeccCCCCCceeeccccceee
Confidence 3689999999999997532 3589999999875
No 430
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=91.28 E-value=0.17 Score=45.75 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=28.0
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
+.+.|+|++|+||++.+ .+.+.++||.-+...+
T Consensus 148 ~~yAH~DiKP~NILls~-~~~~vl~D~GS~~~a~ 180 (302)
T KOG2345|consen 148 PPYAHRDIKPANILLSD-SGLPVLMDLGSATQAP 180 (302)
T ss_pred CcccccCCCcceeEecC-CCceEEEeccCccccc
Confidence 37999999999999985 6889999999776644
No 431
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=91.27 E-value=0.1 Score=47.80 Aligned_cols=30 Identities=30% Similarity=0.495 Sum_probs=25.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|+|++|.||++++ ++.+.++||..+..
T Consensus 132 ~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~ 161 (272)
T cd05075 132 SFIHRDLAARNCMLNE-NMNVCVADFGLSKK 161 (272)
T ss_pred CeeccccchhheEEcC-CCCEEECCCCcccc
Confidence 5899999999999975 67899999987654
No 432
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=91.26 E-value=0.095 Score=49.60 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=30.1
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCc
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYR 263 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~ 263 (382)
...++|+||+|+|++++. +..+.+-||.+|...+.
T Consensus 143 SAnViHRDLKPsNll~n~-~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 143 SANVIHRDLKPSNLLLNA-DCDLKICDFGLARYLDK 177 (359)
T ss_pred cccccccccchhheeecc-CCCEEeccccceeeccc
Confidence 347899999999999985 57799999999988764
No 433
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=90.59 E-value=0.088 Score=48.11 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=27.5
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..-++|+|.+|.|||++. .|.+.|-||.-||.
T Consensus 186 ~lkiIHRDvKPSNILldr-~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 186 ELKIIHRDVKPSNILLDR-HGDVKLCDFGICGQ 217 (361)
T ss_pred HhhhhhccCChhheEEec-CCCEeeecccchHh
Confidence 346799999999999985 68899999998775
No 434
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=90.59 E-value=0.22 Score=47.15 Aligned_cols=32 Identities=31% Similarity=0.336 Sum_probs=27.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
.++|+|++|.||++++ ++.+.|+||..+....
T Consensus 123 gi~H~dlkp~nili~~-~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 123 NVIHRDLKPSNILVNS-NCDLKICDFGLARGVD 154 (330)
T ss_pred CeecCCCCHHHEEEcC-CCCEEEcccCceEeec
Confidence 5899999999999985 5889999999877543
No 435
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=90.20 E-value=6 Score=34.90 Aligned_cols=68 Identities=19% Similarity=0.298 Sum_probs=39.1
Q ss_pred EEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC-----------------CcccchHHHHHHHHHHH-hCCC----Cc
Q 016788 67 DTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT-----------------DIVINRQRELQAIKYLS-AAGF----GA 124 (382)
Q Consensus 67 ~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~-----------------~~~idr~~E~~~l~~l~-~~gl----~P 124 (382)
.+|..|..=.+|.- ++. +..++|+..+.. ...-.-.+|..-...+. ..+. -|
T Consensus 7 ~~i~~G~~R~cy~H--P~d----p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~ 80 (199)
T PF10707_consen 7 DLIAQGGERDCYQH--PDD----PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIP 80 (199)
T ss_pred cccccCCCceEEEC--CCC----CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccc
Confidence 35666655555543 222 257888876544 01112356777777777 5554 27
Q ss_pred eEEEEeC----CceEEEeec
Q 016788 125 KLLAVFG----NGMVQSFIN 140 (382)
Q Consensus 125 ~~~~~~~----~g~i~e~i~ 140 (382)
+++|..+ -|.|+|-|-
T Consensus 81 r~~G~veT~~G~Glv~e~I~ 100 (199)
T PF10707_consen 81 RFYGFVETNLGLGLVVELIR 100 (199)
T ss_pred cEeEEEecCCceEEEEEEEE
Confidence 8888753 247888873
No 436
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=89.76 E-value=0.32 Score=53.10 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=28.3
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..+++|+|++|.||++++ ++.|.|.||..|..
T Consensus 715 ~~giIHRDLKP~NIFLd~-~~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDS-RNSVKIGDFGLATD 746 (1351)
T ss_pred hCceeeccCCcceeEEcC-CCCeeecccccchh
Confidence 446999999999999985 68899999998877
No 437
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=89.52 E-value=0.2 Score=51.25 Aligned_cols=34 Identities=21% Similarity=0.407 Sum_probs=28.6
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
...+||+|++|.|+|++. .+.+.|=||.+|..-.
T Consensus 130 ~~~icHRDLKpENlLLd~-~~nIKIADFGMAsLe~ 163 (786)
T KOG0588|consen 130 AFNICHRDLKPENLLLDV-KNNIKIADFGMASLEV 163 (786)
T ss_pred hhcceeccCCchhhhhhc-ccCEeeeccceeeccc
Confidence 457999999999999986 5569999999997633
No 438
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=89.08 E-value=0.22 Score=49.60 Aligned_cols=33 Identities=33% Similarity=0.489 Sum_probs=28.2
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|.|+.|+||||+.....+.|.||.-|+.
T Consensus 554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 554 KCGVLHADIKPDNILVNESKNILKLCDFGSASF 586 (752)
T ss_pred hcCeeecccCccceEeccCcceeeeccCccccc
Confidence 357899999999999997666789999997765
No 439
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=89.02 E-value=0.35 Score=43.48 Aligned_cols=29 Identities=24% Similarity=0.277 Sum_probs=25.0
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYG 258 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a 258 (382)
..++|+|++|.||+++. ++.+.++||..+
T Consensus 104 ~~i~H~dlkp~Nil~~~-~~~~~l~df~~~ 132 (237)
T cd05576 104 EGIVCRDLNPNNILLDD-RGHIQLTYFSRW 132 (237)
T ss_pred CCeeccCCCHHHEEEcC-CCCEEEecccch
Confidence 36899999999999975 678999999854
No 440
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=88.72 E-value=0.27 Score=44.94 Aligned_cols=31 Identities=23% Similarity=0.459 Sum_probs=26.9
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
-+.|+|++|.|+|+++ +|.+.+=||..|...
T Consensus 121 ~IlHRDlKPnNLLis~-~g~lKiADFGLAr~f 151 (318)
T KOG0659|consen 121 WILHRDLKPNNLLISS-DGQLKIADFGLARFF 151 (318)
T ss_pred hhhcccCCccceEEcC-CCcEEeecccchhcc
Confidence 5689999999999985 789999999988653
No 441
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=88.53 E-value=0.27 Score=45.06 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=27.6
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
..+.|+|++|||+|++. +-.+.|-||..|..-+
T Consensus 175 A~ILHRDIKPGNLLVNS-NCvLKICDFGLARvee 207 (449)
T KOG0664|consen 175 ANILHRDIKPGNLLVNS-NCILKICDFGLARTWD 207 (449)
T ss_pred cchhhccCCCccEEecc-CceEEecccccccccc
Confidence 36789999999999985 5678999999887643
No 442
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=88.10 E-value=0.51 Score=48.65 Aligned_cols=32 Identities=28% Similarity=0.332 Sum_probs=24.6
Q ss_pred eeeeccCCCCCceeeeCCC-CC--EEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQ-EK--LYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~-~~--~~lIDfE~a~~ 260 (382)
..+||+|++|+||+.-.+. |+ -.|+||.+|.-
T Consensus 139 n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 139 NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred cCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 4899999999999875322 32 58999998853
No 443
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=87.64 E-value=0.36 Score=48.98 Aligned_cols=29 Identities=24% Similarity=0.400 Sum_probs=25.5
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 329 ~ivHrDLKp~NILl~~-~~~~kL~DFGla~ 357 (507)
T PLN03224 329 GIVHRDIKPENLLVTV-DGQVKIIDFGAAV 357 (507)
T ss_pred CeecCCCchHhEEECC-CCcEEEEeCcCcc
Confidence 5899999999999975 5789999999874
No 444
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.41 E-value=0.88 Score=42.49 Aligned_cols=72 Identities=14% Similarity=0.133 Sum_probs=50.2
Q ss_pred cCCCeeeeccCCCCCcee--eeCCCCC--EEEEEeecCCCCCchhhHHhhhhhcCccccCCCCCCC---HHHHHHHHHHh
Q 016788 225 LNAPVVFSHNDLLSGNIM--VNDEQEK--LYLIDFEYGSYNYRGYDIGNHFSEYAGYDCDYSLYPN---KDEQNHFFRHY 297 (382)
Q Consensus 225 ~~~~~vl~H~Dl~~~NiL--~~~~~~~--~~lIDfE~a~~~~~~~Dla~~~~e~~~~~~~~~~~p~---~~~~~~fl~~Y 297 (382)
...|.+++-||+|.+|+= -++ +|. +.+=|||-+..|++.+|+-.+......- ...+..++ +...+.|+++|
T Consensus 54 p~~p~tw~cGD~HLgN~ga~~~~-~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~a-~Rs~~L~d~d~~~~~~~~v~~Y 131 (410)
T COG4320 54 PKTPFTWLCGDAHLGNFGAARNS-KGNVVFKIADFDEGHLGQYIWDLVRLAVSLVLA-GRSNGLNDADIEKAIKIMVQAY 131 (410)
T ss_pred CCCCceEEecccccccchhhccC-CCceEEEecccchhhccchHHHHHHHHHHHHHH-hhccCCCchhHHHHHHHHHHHH
Confidence 457889999999999983 333 343 3667999999999999999887654310 11122233 34577899999
Q ss_pred c
Q 016788 298 L 298 (382)
Q Consensus 298 ~ 298 (382)
.
T Consensus 132 ~ 132 (410)
T COG4320 132 K 132 (410)
T ss_pred H
Confidence 3
No 445
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=87.37 E-value=0.34 Score=45.44 Aligned_cols=36 Identities=28% Similarity=0.372 Sum_probs=30.8
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCch
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~ 264 (382)
...++|+||+|.||+++. +..+.+.||.+|.-.++.
T Consensus 136 s~~IihRdLkPsnivv~~-~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 136 SAGIIHRDLKPSNIVVNS-DCTLKILDFGLARTEDTD 171 (369)
T ss_pred hcceeecccCcccceecc-hhheeeccchhhcccCcc
Confidence 458999999999999975 678999999999776655
No 446
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=87.10 E-value=5.1 Score=34.97 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhCCCCceEEEEeCCceEEEeecC
Q 016788 109 RELQAIKYLSAAGFGAKLLAVFGNGMVQSFINA 141 (382)
Q Consensus 109 ~E~~~l~~l~~~gl~P~~~~~~~~g~i~e~i~G 141 (382)
.|..+++.+......|+++|....-.+.|+++.
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~~~v~E~~~~ 40 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGRFYVVEYVGA 40 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCCEEEEEeecC
Confidence 588899999988878999999988889999975
No 447
>PLN00181 protein SPA1-RELATED; Provisional
Probab=85.94 E-value=0.98 Score=48.67 Aligned_cols=31 Identities=6% Similarity=0.013 Sum_probs=25.1
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..++|+|++|.|||+.+ .+.+.++||..+..
T Consensus 99 ~gIvHrDlKP~NiLl~~-~~~~k~~d~~~~~~ 129 (793)
T PLN00181 99 QGIVVHNVRPSCFVMSS-FNHVSFIESASCSD 129 (793)
T ss_pred CCeeeccCCchhEEEcc-cCcEEEeeccccCc
Confidence 47999999999999974 56788888876643
No 448
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=83.82 E-value=0.81 Score=43.37 Aligned_cols=33 Identities=21% Similarity=0.332 Sum_probs=27.0
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+|+++.|||+++.++.+.|-||..+..
T Consensus 135 s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 135 SKGIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred hCCEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 348999999999999975346899999986653
No 449
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=83.63 E-value=0.53 Score=47.77 Aligned_cols=36 Identities=25% Similarity=0.310 Sum_probs=31.0
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhh
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYD 266 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~D 266 (382)
..+|+|++.||||+.+ .+.|.|=||.-|++-.|+--
T Consensus 146 ~~IHRDiKAGNILLse-~g~VKLaDFGSAsi~~PAns 181 (948)
T KOG0577|consen 146 NRIHRDIKAGNILLSE-PGLVKLADFGSASIMAPANS 181 (948)
T ss_pred hHHhhhccccceEecC-CCeeeeccccchhhcCchhc
Confidence 5689999999999975 78999999999988777543
No 450
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=83.28 E-value=1.6 Score=42.18 Aligned_cols=43 Identities=28% Similarity=0.465 Sum_probs=36.0
Q ss_pred cCCCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHh
Q 016788 225 LNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGN 269 (382)
Q Consensus 225 ~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~ 269 (382)
.....-+-|.|++-+|||++ +|.+.||||-.|....+.-+|.+
T Consensus 337 lekkf~fehrnlt~~niLId--~GnvtLIDfklsRl~~~q~~isy 379 (488)
T COG5072 337 LEKKFPFEHRNLTLDNILID--EGNVTLIDFKLSRLSYSQGIISY 379 (488)
T ss_pred hhhcCCcccccccccceeee--cCceEEEEeeeeecccCCceeec
Confidence 44567789999999999997 58899999999998877766654
No 451
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=82.64 E-value=0.77 Score=43.45 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=28.5
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCC-CCCc
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS-YNYR 263 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~-~~~~ 263 (382)
.-++|+||++.|+|++. .|.+.+-||..|. +|.|
T Consensus 196 ~wilHRDLK~SNLLm~~-~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 196 NWILHRDLKTSNLLLSH-KGILKIADFGLAREYGSP 230 (419)
T ss_pred ceeEecccchhheeecc-CCcEEecccchhhhhcCC
Confidence 46799999999999975 7889999999883 4555
No 452
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=81.23 E-value=0.96 Score=44.74 Aligned_cols=32 Identities=16% Similarity=0.269 Sum_probs=27.5
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
..++|+|++|.|+|+++ +|.+.|=||.-+..-
T Consensus 229 QgiiHRDIKPsNLLl~~-~g~VKIsDFGVs~~~ 260 (576)
T KOG0585|consen 229 QGIIHRDIKPSNLLLSS-DGTVKISDFGVSNEF 260 (576)
T ss_pred cCeeccccchhheEEcC-CCcEEeeccceeeec
Confidence 47899999999999986 689999999876643
No 453
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=81.11 E-value=0.82 Score=49.75 Aligned_cols=31 Identities=19% Similarity=0.410 Sum_probs=26.7
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..+++|+|++|+|||++. .|-+.|=||..|.
T Consensus 193 ~mgyVHRDiKPDNvLld~-~GHikLADFGsCl 223 (1317)
T KOG0612|consen 193 SMGYVHRDIKPDNVLLDK-SGHIKLADFGSCL 223 (1317)
T ss_pred hccceeccCCcceeEecc-cCcEeeccchhHH
Confidence 468999999999999975 6889999998653
No 454
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=80.88 E-value=1 Score=44.14 Aligned_cols=29 Identities=28% Similarity=0.469 Sum_probs=24.7
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYG 258 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a 258 (382)
.+-+|+|+++||||+++ +|.|.|=||..+
T Consensus 145 ~G~IHRdvKAgnILi~~-dG~VkLadFgvs 173 (516)
T KOG0582|consen 145 NGHIHRDVKAGNILIDS-DGTVKLADFGVS 173 (516)
T ss_pred cCceecccccccEEEcC-CCcEEEcCceee
Confidence 47799999999999985 788999999543
No 455
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=76.67 E-value=3.8 Score=39.49 Aligned_cols=35 Identities=23% Similarity=0.450 Sum_probs=26.7
Q ss_pred CeeeeccCCCCCceeeeCC-------------------CCCEEEEEeecCCCCC
Q 016788 228 PVVFSHNDLLSGNIMVNDE-------------------QEKLYLIDFEYGSYNY 262 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~-------------------~~~~~lIDfE~a~~~~ 262 (382)
...++|-||+|.|||+-++ .-.+.+|||.-|.+.+
T Consensus 210 ~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~ 263 (415)
T KOG0671|consen 210 DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDH 263 (415)
T ss_pred hcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceec
Confidence 4589999999999998532 1238899999887644
No 456
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=76.35 E-value=2 Score=38.78 Aligned_cols=36 Identities=25% Similarity=0.206 Sum_probs=27.2
Q ss_pred HHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEee
Q 016788 220 ELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFE 256 (382)
Q Consensus 220 ~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE 256 (382)
+..........+.|||.+|.|||-+. .|.+.++|.-
T Consensus 153 ~L~~fH~~~~~~lHGD~np~NiM~D~-~G~lKlVDP~ 188 (308)
T PF07387_consen 153 DLMDFHSENQHCLHGDCNPDNIMCDK-FGYLKLVDPV 188 (308)
T ss_pred HHHHhhccCCCeecCCCChhheeecC-CCCEEecChh
Confidence 33334556678999999999999875 6788888763
No 457
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=76.22 E-value=1.5 Score=40.69 Aligned_cols=31 Identities=26% Similarity=0.423 Sum_probs=26.3
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..+.|+|++|+||+++. .|.+.|=||..+.+
T Consensus 147 ~~VmHRDIKPaNIFl~~-~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 147 GTVMHRDIKPANIFLTA-NGVVKLGDFGLGRF 177 (375)
T ss_pred cceeeccCcchheEEcC-CCceeeccchhHhH
Confidence 46889999999999974 78899999986654
No 458
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=75.11 E-value=1.8 Score=44.47 Aligned_cols=32 Identities=31% Similarity=0.447 Sum_probs=27.1
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYN 261 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~ 261 (382)
.-++|+||..||||+.- +|.+.|-||.-+.-+
T Consensus 149 ~~iIHRDLKAGNiL~Tl-dGdirLADFGVSAKn 180 (1187)
T KOG0579|consen 149 QNIIHRDLKAGNILLTL-DGDIRLADFGVSAKN 180 (1187)
T ss_pred cchhhhhccccceEEEe-cCcEeeecccccccc
Confidence 36799999999999985 688999999876654
No 459
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=74.95 E-value=3.7 Score=41.95 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=27.4
Q ss_pred CCCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 226 NAPVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 226 ~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
...+-++|+||+.+||+++.+.|.|.|=|...|.
T Consensus 161 s~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAt 194 (632)
T KOG0584|consen 161 SQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLAT 194 (632)
T ss_pred cCCCCccccccccceEEEcCCcCceeecchhHHH
Confidence 3455788999999999998767888888877654
No 460
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=74.93 E-value=4.8 Score=39.67 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=26.6
Q ss_pred CCeeeeccCCCCCceeeeCC--CCCEEEEEeecCCC
Q 016788 227 APVVFSHNDLLSGNIMVNDE--QEKLYLIDFEYGSY 260 (382)
Q Consensus 227 ~~~vl~H~Dl~~~NiL~~~~--~~~~~lIDfE~a~~ 260 (382)
-.+-++|-||+|+|||+-++ .|.+.|-||..+.+
T Consensus 587 ikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 587 IKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred cCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 34568999999999998532 25689999998765
No 461
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=74.12 E-value=1.8 Score=37.40 Aligned_cols=29 Identities=31% Similarity=0.478 Sum_probs=24.7
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
-+.|+|++|.|+|++. +|.+.+-||..|.
T Consensus 121 nvlhrdlkpqnllin~-ngelkladfglar 149 (292)
T KOG0662|consen 121 NVLHRDLKPQNLLINR-NGELKLADFGLAR 149 (292)
T ss_pred hhhhccCCcceEEecc-CCcEEecccchhh
Confidence 3568999999999985 6889999999763
No 462
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=74.09 E-value=2.6 Score=40.07 Aligned_cols=42 Identities=12% Similarity=0.116 Sum_probs=28.5
Q ss_pred eEEEEEcCCCCCcccchHHHHHHHHHHHhCCCCceEEEEeCCc
Q 016788 91 SVTVRLYGPNTDIVINRQRELQAIKYLSAAGFGAKLLAVFGNG 133 (382)
Q Consensus 91 ~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~P~~~~~~~~g 133 (382)
.+-+|.-...++. .....|++..+.|....=.|.+|++.+.|
T Consensus 55 ~VAIKfEPrkS~A-PQLrdEYr~YKlL~g~~GIP~vYYFGqeG 96 (449)
T KOG1165|consen 55 PVAIKFEPRKSEA-PQLRDEYRTYKLLGGTEGIPQVYYFGQEG 96 (449)
T ss_pred eEEEEeccccCCc-chHHHHHHHHHHHcCCCCCCceeeecccc
Confidence 5777776544443 24568999999998543338888886655
No 463
>TIGR02569 TIGR02569_actnb conserved hypothetical protein TIGR02569, Actinobacterial. This protein family is found, so far, only in Actinobacteria, including as least five species of Mycobacterium, three of Corynebacterium, and Nocardia farcinica, always in a single copy per genome. The function is unknown.
Probab=73.57 E-value=5.2 Score=36.59 Aligned_cols=56 Identities=13% Similarity=0.169 Sum_probs=38.4
Q ss_pred HHHHHHHHhcccCCCeeeeccCCCCCceeeeCCCCCEEEEEee-cCCCCCchhhHHhhhhh
Q 016788 214 EIVELKELAGHLNAPVVFSHNDLLSGNIMVNDEQEKLYLIDFE-YGSYNYRGYDIGNHFSE 273 (382)
Q Consensus 214 ~~~~l~~~~~~~~~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE-~a~~~~~~~Dla~~~~e 273 (382)
.+..|.+.......+..++|+|+. ||+||.. ..-..|||+- |. -|..|=-|..+..
T Consensus 159 l~~~l~~lrrpv~~p~QlvHgDl~-gt~lF~g-~~~P~itDi~pyw--RP~~waaAvvvVD 215 (272)
T TIGR02569 159 LINQIAGLLKPIKSPNQVVHADMY-ATTLYAG-TQPPGVTDLVPVW--RPAGWTAAVAIVD 215 (272)
T ss_pred HHHHHHHHhcccCCCcceeeeecc-cceeecC-CCCCceeeccccc--CcchhhhHHHHHH
Confidence 344444444455678899999997 8999974 5668999997 43 4556666655544
No 464
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=72.76 E-value=15 Score=38.53 Aligned_cols=141 Identities=18% Similarity=0.223 Sum_probs=75.0
Q ss_pred ecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCc--ccchHHHHHHHHHHHhCCCCceEEEEeCCceEEEeecCCcCCc
Q 016788 69 VSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDI--VINRQRELQAIKYLSAAGFGAKLLAVFGNGMVQSFINARTLTP 146 (382)
Q Consensus 69 l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~--~idr~~E~~~l~~l~~~gl~P~~~~~~~~g~i~e~i~G~~l~~ 146 (382)
|..|....|++-.-+...|+.-.+-||+-+.+... +-|..+|..++..|....+ -++|+ -.++.
T Consensus 118 LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hl-iRLyG-------------vVl~q 183 (1039)
T KOG0199|consen 118 LGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHL-IRLYG-------------VVLDQ 183 (1039)
T ss_pred hcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcce-eEEee-------------eeccc
Confidence 34555555555444433333335778888776532 3456678777765543211 13333 22321
Q ss_pred cccCChHHHHHHHHHHHHHhcccCCCCCCCcchhhHHHHHHHhccCCCCcHHHhhcccccCHHHHHHHHHHHHHHhcccC
Q 016788 147 ADMRNPKLAAEIAKQLRRFHQVEIPGSKEPQLWNDVSKFFEKASSLKFDEIEKQSMYETISFKEVQKEIVELKELAGHLN 226 (382)
Q Consensus 147 ~~~~~~~~~~~ia~~La~lH~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~ 226 (382)
.-+-=.+ ...+|..|.+||.... . +-+-..+-+|..+ +.+.+..|+
T Consensus 184 p~mMV~E-LaplGSLldrLrka~~-~---~llv~~Lcdya~Q----------------------iA~aM~YLe------- 229 (1039)
T KOG0199|consen 184 PAMMVFE-LAPLGSLLDRLRKAKK-A---ILLVSRLCDYAMQ----------------------IAKAMQYLE------- 229 (1039)
T ss_pred hhhHHhh-hcccchHHHHHhhccc-c---ceeHHHHHHHHHH----------------------HHHHHHHHh-------
Confidence 1000001 3457888999998321 1 1122233333322 222222232
Q ss_pred CCeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 227 APVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 227 ~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
...++|+|+-..|+|+-. ...|.|-||....
T Consensus 230 -skrlvHRDLAARNlllas-prtVKI~DFGLmR 260 (1039)
T KOG0199|consen 230 -SKRLVHRDLAARNLLLAS-PRTVKICDFGLMR 260 (1039)
T ss_pred -hhhhhhhhhhhhhheecc-cceeeeeccccee
Confidence 237899999999999874 6789999998764
No 465
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=72.29 E-value=5.2 Score=37.87 Aligned_cols=32 Identities=28% Similarity=0.492 Sum_probs=24.9
Q ss_pred CeeeeccCCCCCceeeeCCCC--CEEEEEeecCC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQE--KLYLIDFEYGS 259 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~--~~~lIDfE~a~ 259 (382)
...+.|+|++|.|||-.+.+. .+.|-|||.++
T Consensus 194 ~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS 227 (463)
T KOG0607|consen 194 TKGIAHRDLKPENILCESPNKVSPVKICDFDLGS 227 (463)
T ss_pred hcCcccccCCccceeecCCCCcCceeeecccccc
Confidence 457999999999999764332 38999999764
No 466
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st
Probab=71.07 E-value=3.5 Score=37.43 Aligned_cols=32 Identities=25% Similarity=0.197 Sum_probs=27.2
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..++.=||=|++|||++.+.|.+.-|||.++-
T Consensus 135 ~YilglgDRH~~NIli~~~tG~v~HIDfg~~f 166 (235)
T cd05172 135 HWILGIGDRHLSNFLVDLETGGLVGIDFGHAF 166 (235)
T ss_pred hheeeccCCCcccEEEECCCCcEEEEeeHhhh
Confidence 45788899999999998557899999998654
No 467
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=70.36 E-value=18 Score=35.73 Aligned_cols=40 Identities=23% Similarity=0.257 Sum_probs=30.9
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhhHHh
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYDIGN 269 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~Dla~ 269 (382)
..+.|+|+++.||+.+. ++.+.+=||+-|..--+..++|.
T Consensus 125 ~~iLHRDlK~~Nifltk-~~~VkLgDfGlaK~l~~~~~~a~ 164 (426)
T KOG0589|consen 125 NRVLHRDLKCANIFLTK-DKKVKLGDFGLAKILNPEDSLAS 164 (426)
T ss_pred hhhhcccchhhhhhccc-cCceeecchhhhhhcCCchhhhh
Confidence 46789999999999986 56789999998866555544543
No 468
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=69.98 E-value=5.5 Score=41.45 Aligned_cols=39 Identities=26% Similarity=0.363 Sum_probs=32.2
Q ss_pred CCeeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCchhh
Q 016788 227 APVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRGYD 266 (382)
Q Consensus 227 ~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~~D 266 (382)
...+++|.|+++.|+++.. .+.+.++||.-+...--.++
T Consensus 437 h~~GiahrdlK~enll~~~-~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 437 HSMGLAHRDLKLENLLVTE-NGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred HhcCceeccCccccEEEec-CCceEEeecCcceeeccCcc
Confidence 3469999999999999985 67999999998877655554
No 469
>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the
Probab=69.79 E-value=4.1 Score=36.49 Aligned_cols=36 Identities=25% Similarity=0.360 Sum_probs=28.6
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCch
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~ 264 (382)
.++.=||=|++|||++..+|.+.-|||.++--..+.
T Consensus 128 YilglgDRh~~NIli~~~~G~~~hIDfg~~~~~~~~ 163 (219)
T cd00142 128 YILGIGDRHPDNIMIDLDTGKLFHIDFGFIFGKRKK 163 (219)
T ss_pred HHhccCCCCCccEEEECCCCeEEEEeeHHhhCcCcC
Confidence 356678999999999875789999999986544444
No 470
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=69.52 E-value=2.5 Score=41.87 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=26.2
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..+|-|+|++|.|||+.. ...+.|=||..|.
T Consensus 128 k~GfFHRDlKPENiLi~~-~~~iKiaDFGLAR 158 (538)
T KOG0661|consen 128 KHGFFHRDLKPENILISG-NDVIKIADFGLAR 158 (538)
T ss_pred hcCcccccCChhheEecc-cceeEeccccccc
Confidence 358999999999999974 5679999999764
No 471
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=69.40 E-value=3.2 Score=39.09 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=24.2
Q ss_pred eeeccCCCCCceeeeCC---CCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDE---QEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~---~~~~~lIDfE~a~~ 260 (382)
=+.|+||+|.|||+-.+ .|.|.|=|+.+|..
T Consensus 152 WvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~ 185 (438)
T KOG0666|consen 152 WVLHRDLKPANILVMGDGPERGRVKIADLGLARL 185 (438)
T ss_pred heeeccCCcceEEEeccCCccCeeEeecccHHHH
Confidence 45799999999999642 27788889887653
No 472
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=69.20 E-value=2.8 Score=39.28 Aligned_cols=30 Identities=20% Similarity=0.333 Sum_probs=21.4
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++|||+.+.|+++++ +|.+.|=||+....
T Consensus 165 GlVHgdi~~~nfll~~-~G~v~Lg~F~~~~r 194 (288)
T PF14531_consen 165 GLVHGDIKPENFLLDQ-DGGVFLGDFSSLVR 194 (288)
T ss_dssp TEEEST-SGGGEEE-T-TS-EEE--GGGEEE
T ss_pred ceEecccceeeEEEcC-CCCEEEcChHHHee
Confidence 6999999999999986 68899999986643
No 473
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=68.92 E-value=2.7 Score=39.41 Aligned_cols=40 Identities=23% Similarity=0.331 Sum_probs=30.9
Q ss_pred eeeeccCCCCCceeeeCC--CCCEEEEEeecCCCCCchhhHH
Q 016788 229 VVFSHNDLLSGNIMVNDE--QEKLYLIDFEYGSYNYRGYDIG 268 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~--~~~~~lIDfE~a~~~~~~~Dla 268 (382)
.-+.|+|++|.|+|+.+. +-.+.|-||.+|..-..-.|+-
T Consensus 180 ~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~ 221 (400)
T KOG0604|consen 180 MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLM 221 (400)
T ss_pred cchhhccCChhheeeecCCCCcceEecccccccccCCCcccc
Confidence 467899999999999642 3458999999998766555554
No 474
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=68.70 E-value=42 Score=37.01 Aligned_cols=30 Identities=23% Similarity=0.462 Sum_probs=26.6
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
.-|+|.||-..|.|++. ...+.|=||..|.
T Consensus 821 ~~fvHRDLAaRNCLL~~-~r~VKIaDFGlAr 850 (1025)
T KOG1095|consen 821 KHFVHRDLAARNCLLDE-RRVVKIADFGLAR 850 (1025)
T ss_pred CCCcCcchhhhheeecc-cCcEEEcccchhH
Confidence 47899999999999975 6789999999887
No 475
>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central
Probab=68.42 E-value=4.1 Score=37.03 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=26.3
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++-=||=|++|||++...|.+.-|||.++--
T Consensus 139 YilgigDRh~~NIli~~~tG~~~HIDfg~~~~ 170 (237)
T cd00892 139 YILGLGDRHGENILFDSNTGDVVHVDFNCLFD 170 (237)
T ss_pred HHhccCCCCcccEEEEcCCCcEEEEehHhhhc
Confidence 46677899999999987578899999986543
No 476
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=68.40 E-value=2.5 Score=41.47 Aligned_cols=29 Identities=24% Similarity=0.302 Sum_probs=21.1
Q ss_pred eeeccCCCCCceeeeCC---CCCEEEEEeecC
Q 016788 230 VFSHNDLLSGNIMVNDE---QEKLYLIDFEYG 258 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~---~~~~~lIDfE~a 258 (382)
-|+|+|+|||||++... +....++|=|-+
T Consensus 365 NFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~ 396 (565)
T KOG1236|consen 365 NFVHADLHPGNVLIRFNKTEDNLRGVHKAEKA 396 (565)
T ss_pred cceecccCCCcEEEEecCCCccccccccchhh
Confidence 58999999999998532 234667776654
No 477
>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac
Probab=68.09 E-value=51 Score=29.83 Aligned_cols=50 Identities=16% Similarity=0.035 Sum_probs=32.7
Q ss_pred eEEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCCcccchHHHHHHHHHHHhCCCC-ce
Q 016788 64 FSVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTDIVINRQRELQAIKYLSAAGFG-AK 125 (382)
Q Consensus 64 ~~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~~~idr~~E~~~l~~l~~~gl~-P~ 125 (382)
+++..+++|.+--++.+...++ .+|+|..+ ++..|....+...-.|++ |.
T Consensus 2 ie~i~~s~s~~~~~~F~~s~~~-----a~ViK~s~-------ti~~E~~~~~La~~LgVpiPq 52 (238)
T cd05124 2 IKAIDLSDSGVFGALFVESESG-----AIVVKSSP-------NIASEYFLSKLAKILGLPIPQ 52 (238)
T ss_pred ceEEEecCCceEEEEEEcCCCc-----EEEEEcCc-------cHHHHHHHHHHHHHhCCCCCc
Confidence 4667777776655555555443 68888764 346787776666667885 63
No 478
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=67.82 E-value=1.6 Score=40.69 Aligned_cols=28 Identities=32% Similarity=0.485 Sum_probs=24.5
Q ss_pred eccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 232 SHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 232 ~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
+|+|++.||||++. +|...|-||.-||-
T Consensus 151 IHRDIKAGNILLNT-~G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 151 IHRDIKAGNILLNT-DGIAKLADFGVAGQ 178 (502)
T ss_pred HHhhcccccEEEcc-cchhhhhhccccch
Confidence 79999999999985 68889999988764
No 479
>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transi
Probab=67.74 E-value=4.2 Score=37.92 Aligned_cols=31 Identities=16% Similarity=0.355 Sum_probs=26.8
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYG 258 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a 258 (382)
..++.=||-|++||+++...|.+.-|||.++
T Consensus 180 ~yilglgDRh~~NIll~~~tG~v~hiDf~~~ 210 (279)
T cd05171 180 GYILGLGDRHANNILIDEKTAEVVHIDLGIA 210 (279)
T ss_pred HHhhccCCCCcccEEEEcCcCcEEEEechhh
Confidence 4577889999999999865789999999976
No 480
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=66.82 E-value=3 Score=40.65 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=27.1
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
...++|+||+..|||+++ ++.+.|-||..+.+
T Consensus 171 knrVvHRDLKLENILLD~-N~NiKIADFGLSNl 202 (668)
T KOG0611|consen 171 KNRVVHRDLKLENILLDQ-NNNIKIADFGLSNL 202 (668)
T ss_pred hccceecccchhheeecC-CCCeeeeccchhhh
Confidence 347789999999999985 67899999997654
No 481
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno
Probab=66.63 E-value=4.8 Score=38.13 Aligned_cols=31 Identities=16% Similarity=0.240 Sum_probs=26.8
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYG 258 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a 258 (382)
..++-=||-|++|||++...|.+.-|||.++
T Consensus 208 ~yilglgDRh~~NIli~~~tG~v~hiDf~~~ 238 (307)
T cd05170 208 GYVIGLGDRHLDNVLIDLKTGEVVHIDYNVC 238 (307)
T ss_pred HHHccCCCCCCccEEEEcCCCcEEEEeeHhh
Confidence 4578889999999999866788999999965
No 482
>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with
Probab=64.97 E-value=4.9 Score=37.49 Aligned_cols=32 Identities=25% Similarity=0.302 Sum_probs=27.1
Q ss_pred CCeeeeccCCCCCceeeeCCCCCEEEEEeecC
Q 016788 227 APVVFSHNDLLSGNIMVNDEQEKLYLIDFEYG 258 (382)
Q Consensus 227 ~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a 258 (382)
...++-=||=|++|||++...|.+.=|||.++
T Consensus 179 ~~YilglgDRH~~NIll~~~tG~v~HIDfg~~ 210 (280)
T cd05169 179 VGYILGLGDRHPSNIMIDRLTGKVIHIDFGDC 210 (280)
T ss_pred HHhheeccCCCcceEEEEcCCCCEEEEecHHH
Confidence 34678889999999999876789999999854
No 483
>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d
Probab=64.33 E-value=5.2 Score=35.96 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=26.2
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++.=||-|++||+++...|.+.=|||.++--
T Consensus 131 YvlglgDRh~~NIli~~~tG~v~hIDf~~~~~ 162 (222)
T cd05164 131 YILGLGDRHLDNILIDRETGEVVHIDFGCIFE 162 (222)
T ss_pred HHhccCCCCCceEEEECCCCcEEEEccHHhhc
Confidence 46677899999999997678898999986533
No 484
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=63.41 E-value=3.9 Score=37.16 Aligned_cols=29 Identities=28% Similarity=0.511 Sum_probs=24.8
Q ss_pred eeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 231 FSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 231 l~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
++|+|+.|.||+++..+..+.++||..+.
T Consensus 122 ~~hrd~kp~nil~~~~~~~~~l~dfg~~~ 150 (384)
T COG0515 122 IIHRDIKPENILLDRDGRVVKLIDFGLAK 150 (384)
T ss_pred eeccCCCHHHeeecCCCCeEEEeccCcce
Confidence 99999999999997532269999999876
No 485
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=61.92 E-value=3.8 Score=37.44 Aligned_cols=29 Identities=24% Similarity=0.422 Sum_probs=25.8
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYG 258 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a 258 (382)
.-+.|+|.++.|+|++. ++.+.+-||..+
T Consensus 143 ~kilHRDmKaaNvLIt~-dgilklADFGla 171 (376)
T KOG0669|consen 143 NKILHRDMKAANVLITK-DGILKLADFGLA 171 (376)
T ss_pred hhHHhhcccHhhEEEcC-CceEEeeccccc
Confidence 46789999999999975 688999999988
No 486
>cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TRRAP shows some similarity to members of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily in that it contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain and has a large molecular weight. Unlike PIKK proteins, however, it contains an inactive PI3K-like pseudokinase domain, which lacks the conserved residues necessary for ATP binding and catalytic activity. TRRAP also contains many motifs that may be critical for protein-protein interactions. TRRAP is a common component of many histone acetyltransferase (HAT) complexes, and is responsible for the recruitment of these complexes to chromatin during transcription, replicat
Probab=61.86 E-value=7.3 Score=35.79 Aligned_cols=30 Identities=17% Similarity=0.285 Sum_probs=25.6
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYG 258 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a 258 (382)
.++-=||-|++||+++.+.|.+.-|||..+
T Consensus 154 YilglgdRh~~nili~~~tG~v~hiDf~~~ 183 (253)
T cd05163 154 YILSINNRNPDKIFISRDTGNVYQSDLLPS 183 (253)
T ss_pred HHhcCCCCCchhEEEEcCCCcEEEEeeeee
Confidence 466779999999999877789999999843
No 487
>PHA03111 Ser/Thr kinase; Provisional
Probab=61.63 E-value=14 Score=35.52 Aligned_cols=47 Identities=15% Similarity=0.153 Sum_probs=28.2
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCC--CcccchHHHHHHHHHHHhC
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNT--DIVINRQRELQAIKYLSAA 120 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~--~~~idr~~E~~~l~~l~~~ 120 (382)
.+-.++.|--.-+||+. +||||.--... -..++...|+.+-+.|...
T Consensus 90 dfYHisTGGyGivFrid---------~yVvKFv~e~n~~y~p~~~t~EytIPrfLynn 138 (444)
T PHA03111 90 DFYHISTGGYGIVFKID---------KYVVKFVFEPNKGYSPMETTAEYTIPKFLYNN 138 (444)
T ss_pred ceEEEecCcceEEEEEe---------eEEEEEEEcCCCCCCcccccceeeecHHHHhh
Confidence 34555555556778771 58888643221 1245667788777777653
No 488
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain. Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.
Probab=61.45 E-value=7.6 Score=34.27 Aligned_cols=35 Identities=26% Similarity=0.344 Sum_probs=27.3
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCCCch
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNYRG 264 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~~~ 264 (382)
.++-=||-|++||+++ ++|.+.=|||.++--..+.
T Consensus 101 YilglgDRh~~NIli~-~~G~v~hIDfg~~~~~~~~ 135 (202)
T smart00146 101 YILGLGDRHNDNIMLD-KTGHLFHIDFGFILGNGPK 135 (202)
T ss_pred HHhcCCCCCCCcEEEe-CCCCEEEEechhhhCcccc
Confidence 3556689999999998 5788999999987554443
No 489
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=61.44 E-value=6.1 Score=39.78 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=27.7
Q ss_pred CCeeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 227 APVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 227 ~~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
..+-++|+||+|.|+.|-+.-|.+.|-||.++.-
T Consensus 135 HqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNk 168 (864)
T KOG4717|consen 135 HQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNK 168 (864)
T ss_pred hhhhhhcccCCcceeEEeeecCceEeeecccccc
Confidence 3456789999999998765568899999998754
No 490
>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes. It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.
Probab=61.33 E-value=65 Score=29.91 Aligned_cols=36 Identities=22% Similarity=0.275 Sum_probs=12.9
Q ss_pred cCCCCCceeeeCC--CCCEEEEEeecCCCCCchhhHHh
Q 016788 234 NDLLSGNIMVNDE--QEKLYLIDFEYGSYNYRGYDIGN 269 (382)
Q Consensus 234 ~Dl~~~NiL~~~~--~~~~~lIDfE~a~~~~~~~Dla~ 269 (382)
|.-++.|||+.+. +-.+..||-...+++...||++.
T Consensus 182 n~gN~~Nil~~~~p~~~~~~~i~~~i~~i~~~~f~~~~ 219 (275)
T PF09192_consen 182 NEGNPSNILFYEKPNGWYFSLIDSNITCIDNSSFTIGY 219 (275)
T ss_dssp S---GGGEEEESB--TT-EEE-S-------SS------
T ss_pred CCCChhheEEecccccceeeecccccccccchhhhhhH
Confidence 3477899999742 12377899988888888888763
No 491
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=59.71 E-value=19 Score=37.89 Aligned_cols=30 Identities=27% Similarity=0.362 Sum_probs=25.0
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYG 258 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a 258 (382)
.-++|+|++-+|+|++.=.|.+.|=||..+
T Consensus 694 n~IVHRDIKGDNVLvNTySGvlKISDFGTs 723 (1226)
T KOG4279|consen 694 NKIVHRDIKGDNVLVNTYSGVLKISDFGTS 723 (1226)
T ss_pred cceeeccccCCcEEEeeccceEEecccccc
Confidence 467999999999999865577888888764
No 492
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=59.18 E-value=5.8 Score=36.74 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=25.8
Q ss_pred CeeeeccCCCCCceee-eCCCCCEEEEEeecCCC
Q 016788 228 PVVFSHNDLLSGNIMV-NDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~-~~~~~~~~lIDfE~a~~ 260 (382)
..-++|+|++..|||+ +.+..++.+-||.-...
T Consensus 139 sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 139 SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred ccchhhcccccceEEEecCCccEEEeeecccccc
Confidence 3468999999999986 44456799999986543
No 493
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=56.84 E-value=6.1 Score=39.72 Aligned_cols=30 Identities=23% Similarity=0.427 Sum_probs=26.1
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..++-+||+|.|+|++. +|-+.|+||.+|.
T Consensus 539 k~iIYRDLKPENllLd~-~Gy~KLVDFGFAK 568 (732)
T KOG0614|consen 539 KGIIYRDLKPENLLLDN-RGYLKLVDFGFAK 568 (732)
T ss_pred cCceeccCChhheeecc-CCceEEeehhhHH
Confidence 46888999999999974 7889999999874
No 494
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=56.68 E-value=13 Score=36.35 Aligned_cols=33 Identities=33% Similarity=0.458 Sum_probs=24.2
Q ss_pred CeeeeccCCCCCceeee-CCCC--CEEEEEeecCCC
Q 016788 228 PVVFSHNDLLSGNIMVN-DEQE--KLYLIDFEYGSY 260 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~-~~~~--~~~lIDfE~a~~ 260 (382)
...+.|.|++++|||+. ++++ .+++-||.+|-.
T Consensus 359 ~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA 394 (598)
T KOG4158|consen 359 KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA 394 (598)
T ss_pred HccchhhcccccceEEEecCCCCcEEEEcccceeee
Confidence 35789999999999984 2233 478889986643
No 495
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=56.14 E-value=14 Score=35.70 Aligned_cols=46 Identities=13% Similarity=0.215 Sum_probs=28.4
Q ss_pred EEEEecceeeeeEEEEEecCCCCCCeeEEEEEcCCCCC--cccchHHHHHHHHHHHh
Q 016788 65 SVDTVSGGITNLLLKVTVKEESGNDVSVTVRLYGPNTD--IVINRQRELQAIKYLSA 119 (382)
Q Consensus 65 ~i~~l~gG~tN~~y~v~~~~~~~~~~~~vlRi~~~~~~--~~idr~~E~~~l~~l~~ 119 (382)
.+-.++.|.-.-+||+ + +||||.--..+. ..++...|+.+-+.|..
T Consensus 85 dfYHisTGGYGivFri---d------~yVvKFv~e~~~~~~p~~~t~EytIPrfLyn 132 (434)
T PF05445_consen 85 DFYHISTGGYGIVFRI---D------KYVVKFVFEPNKNYSPIDTTAEYTIPRFLYN 132 (434)
T ss_pred ceEEEecCcceEEEEE---e------eEEEEEEEccccCCCcccccceeeecHHHHh
Confidence 3455555556778887 1 599997432222 24566678877777765
No 496
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=55.26 E-value=6.4 Score=40.17 Aligned_cols=30 Identities=27% Similarity=0.359 Sum_probs=25.6
Q ss_pred eeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 230 VFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 230 vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
-++|+||+.-|||+.- ++.|.|-||..+..
T Consensus 232 KIIHRDLKSPNiLIs~-~d~VKIsDFGTS~e 261 (904)
T KOG4721|consen 232 KIIHRDLKSPNILISY-DDVVKISDFGTSKE 261 (904)
T ss_pred hHhhhccCCCceEeec-cceEEeccccchHh
Confidence 5689999999999975 67899999987653
No 497
>PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) [] is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The three products of PI3-kinase - PI-3-P, PI-3,4-P(2) and PI-3,4,5-P(3) function as secondary messengers in cell signalling. Phosphatidylinositol 4-kinase (PI4-kinase) (2.7.1.67 from EC) [] is an enzyme that acts on phosphatidylinositol (PI) in the first committed step in the production of the secondary messenger inositol-1'4'5'-trisphosphate. This domain is also present in a wide range of protein kinases, involved in diverse cellular functions, such as control of cell growth, regulation of cell cycle progression, a DNA damage checkpoint, recombination, and maintenance of telomere length. Despite significant homology to lipid kinases, no lipid kinase activity has been demonstrated for any of the PIK-related kinases []. The PI3- and PI4-kinases share a well conserved domain at their C-terminal section; this domain seems to be distantly related to the catalytic domain of protein kinases [, ]. The catalytic domain of PI3K has the typical bilobal structure that is seen in other ATP-dependent kinases, with a small N-terminal lobe and a large C-terminal lobe. The core of this domain is the most conserved region of the PI3Ks. The ATP cofactor binds in the crevice formed by the N-and C-terminal lobes, a loop between two strands provides a hydrophobic pocket for binding of the adenine moiety, and a lysine residue interacts with the alpha-phosphate. In contrast to protein kinases, the PI3K loop which interacts with the phosphates of the ATP and is known as the glycine-rich or P-loop, contains no glycine residues. Instead, contact with the ATP -phosphate is maintained through the side chain of a conserved serine residue.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 2WXL_A 4AJW_B 2WXQ_A 2WXP_A 2WXM_A 2WXH_A 2WXK_A 2WXG_A 2X38_A 2WXF_A ....
Probab=55.14 E-value=6.6 Score=35.34 Aligned_cols=32 Identities=25% Similarity=0.403 Sum_probs=20.1
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSY 260 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~ 260 (382)
.++-=||=|++|||++..+|.+.-|||.++--
T Consensus 134 yilg~gDRh~~Nili~~~~g~~~hIDfg~~f~ 165 (235)
T PF00454_consen 134 YILGLGDRHPGNILIDKKTGELIHIDFGFIFG 165 (235)
T ss_dssp HHHT-CS--TTTEEE-ETTSEEEE--HSSCTT
T ss_pred EEEeecCCCchhheeccccceeeeEEeHHhhh
Confidence 35556899999999954578899999987544
No 498
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=52.07 E-value=7.8 Score=39.66 Aligned_cols=31 Identities=26% Similarity=0.463 Sum_probs=26.7
Q ss_pred CeeeeccCCCCCceeeeCCCCCEEEEEeecCC
Q 016788 228 PVVFSHNDLLSGNIMVNDEQEKLYLIDFEYGS 259 (382)
Q Consensus 228 ~~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~ 259 (382)
..-|+|+|+-+.|+|++. +..+.|-||.++.
T Consensus 655 s~nfVHrd~a~rNcLv~~-e~~iKiadfgmsR 685 (807)
T KOG1094|consen 655 SLNFVHRDLATRNCLVDG-EFTIKIADFGMSR 685 (807)
T ss_pred hhchhhccccccceeecC-cccEEecCccccc
Confidence 357899999999999974 6789999998776
No 499
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=50.43 E-value=5.6 Score=36.08 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=27.3
Q ss_pred eeeeccCCCCCceeeeCCCCCEEEEEeecCCCCC
Q 016788 229 VVFSHNDLLSGNIMVNDEQEKLYLIDFEYGSYNY 262 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~~~~~~lIDfE~a~~~~ 262 (382)
..++|+|+.|.|+|.+. .+.+.+=||..+-.++
T Consensus 143 k~VIhRdiKpenlLlg~-~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 143 KRVIHRDIKPENLLLGS-AGELKIADFGWSVHAP 175 (281)
T ss_pred CCcccCCCCHHHhccCC-CCCeeccCCCceeecC
Confidence 46789999999999975 6789999998776654
No 500
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=50.23 E-value=9.9 Score=40.39 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=24.0
Q ss_pred eeeeccCCCCCceeeeCC---C-CCEEEEEeecCC
Q 016788 229 VVFSHNDLLSGNIMVNDE---Q-EKLYLIDFEYGS 259 (382)
Q Consensus 229 ~vl~H~Dl~~~NiL~~~~---~-~~~~lIDfE~a~ 259 (382)
..++|+|++|.|||+... + ..+.|=||..|-
T Consensus 625 l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 625 LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred cccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 789999999999999641 1 346778888763
Done!