BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016789
(382 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 166/293 (56%), Gaps = 16/293 (5%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRD-TVVAIKR----RVGSPRQEFVAE 129
++FS+ EL+ A+ FS +++G G FG VYKG L D T+VA+KR R +F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 130 VTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSI 189
V +S HRNL+ L G+C ++LV+ Y+ NGS+ + L E ES L++ +R I
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRI 144
Query: 190 ALGAAKGLCHLHS-LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE--NIEEAGPSH 246
ALG+A+GL +LH P ++H++ K AN+L+DE F A V D G++KL++ +
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 247 GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYE--ALIQWVRS 304
G+I ++ PE +G SE +D++ +GV LLEL+TGQ A + L + + L+ WV+
Sbjct: 205 GTIGHIA--PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 305 RLSSNN---FVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELE 354
L VD L G + E + LI++ L C S RPKM V+ LE
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 163/293 (55%), Gaps = 16/293 (5%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRD-TVVAIKR----RVGSPRQEFVAE 129
++FS+ EL+ A+ F +++G G FG VYKG L D +VA+KR R +F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 130 VTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSI 189
V +S HRNL+ L G+C ++LV+ Y+ NGS+ + L E ES L++ +R I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRI 136
Query: 190 ALGAAKGLCHLHS-LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE--NIEEAGPSH 246
ALG+A+GL +LH P ++H++ K AN+L+DE F A V D G++KL++ +
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 247 GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYE--ALIQWVRS 304
G I ++ PE +G SE +D++ +GV LLEL+TGQ A + L + + L+ WV+
Sbjct: 197 GXIGHIA--PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 305 RLSSNN---FVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELE 354
L VD L G + E + LI++ L C S RPKM V+ LE
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 164/299 (54%), Gaps = 25/299 (8%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTV-VAIKRRVGSPRQ---EF 126
P + + + +LE+AT F LIG G FG VYKG+LRD VA+KRR Q EF
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF 82
Query: 127 VAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQR 186
E+ LS RH +LV+L+G+C + +L+++Y+ NG++ HLY + L + + + ++QR
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQR 141
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+ I +GAA+GL +LH+ ++H++ K+ N+L+DENF+ K+ D GISK E G +H
Sbjct: 142 LEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISK---KGTELGQTH 196
Query: 247 GSIVNV----FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA--LIQ 300
V + DPE G +E SD+YSFGV L E++ + A IV E L +
Sbjct: 197 LXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA--IVQSLPREMVNLAE 254
Query: 301 WVRSRLSSNN-----FVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELE 354
W S NN VD LA E +R ++C++ RP M V+ +LE
Sbjct: 255 WAVE--SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 164/298 (55%), Gaps = 23/298 (7%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTV-VAIKRRVGSPRQ---EF 126
P + + + +LE+AT F LIG G FG VYKG+LRD VA+KRR Q EF
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF 82
Query: 127 VAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQR 186
E+ LS RH +LV+L+G+C + +L+++Y+ NG++ HLY + L + + + ++QR
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQR 141
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKL---LENIEEAG 243
+ I +GAA+GL +LH+ ++H++ K+ N+L+DENF+ K+ D GISK L+
Sbjct: 142 LEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX 199
Query: 244 PSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA--LIQW 301
G++ + DPE G +E SD+YSFGV L E++ + A IV E L +W
Sbjct: 200 VVKGTLGYI--DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA--IVQSLPREMVNLAEW 255
Query: 302 VRSRLSSNN-----FVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELE 354
S NN VD LA E +R ++C++ RP M V+ +LE
Sbjct: 256 AVE--SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 147/296 (49%), Gaps = 22/296 (7%)
Query: 77 FSMEELEQATKQFSETSL------IGFGSFGPVYKGLLRDTVVAIKRRVG-------SPR 123
FS EL+ T F E + +G G FG VYKG + +T VA+K+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEF 183
Q+F E+ +++ +H NLV LLG+ LV+ Y+PNGS+ + L + L+ + L +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 132
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
R IA GAA G+ LH + +H++ K+AN+L+DE F AK++D G+++ E +
Sbjct: 133 HMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 244 PSHGSI-VNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEA--SHIVSLGSYEALIQ 300
+ + PE G + SDIYSFGV LLE++TG A H + +
Sbjct: 191 MXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 301 WVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
+ +++D ++ +T + + + QC+ +RP ++ V L+ +
Sbjct: 250 IEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 147/296 (49%), Gaps = 22/296 (7%)
Query: 77 FSMEELEQATKQFSETSL------IGFGSFGPVYKGLLRDTVVAIKRRVG-------SPR 123
FS EL+ T F E + +G G FG VYKG + +T VA+K+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEF 183
Q+F E+ +++ +H NLV LLG+ LV+ Y+PNGS+ + L + L+ + L +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 132
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
R IA GAA G+ LH + +H++ K+AN+L+DE F AK++D G+++ E +
Sbjct: 133 HMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 244 PSHGSI-VNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEA--SHIVSLGSYEALIQ 300
+ + PE G + SDIYSFGV LLE++TG A H + +
Sbjct: 191 MXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 301 WVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
+ +++D ++ +T + + + QC+ +RP ++ V L+ +
Sbjct: 250 IEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 147/296 (49%), Gaps = 22/296 (7%)
Query: 77 FSMEELEQATKQFSETSL------IGFGSFGPVYKGLLRDTVVAIKRRVG-------SPR 123
FS EL+ T F E + +G G FG VYKG + +T VA+K+ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEF 183
Q+F E+ +++ +H NLV LLG+ LV+ Y+PNGS+ + L + L+ + L +
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 126
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
R IA GAA G+ LH + +H++ K+AN+L+DE F AK++D G+++ E +
Sbjct: 127 HMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 244 PSHGSI-VNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEA--SHIVSLGSYEALIQ 300
+ + PE G + SDIYSFGV LLE++TG A H + +
Sbjct: 185 MXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 243
Query: 301 WVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
+ +++D ++ +T + + + QC+ +RP ++ V L+ +
Sbjct: 244 IEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 117/224 (52%), Gaps = 19/224 (8%)
Query: 77 FSMEELEQATKQFSETSL------IGFGSFGPVYKGLLRDTVVAIKRRVG-------SPR 123
FS EL+ T F E + G G FG VYKG + +T VA+K+ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEF 183
Q+F E+ ++ +H NLV LLG+ LV+ Y PNGS+ + L + L+ + L +
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSW 123
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
R IA GAA G+ LH + +H++ K+AN+L+DE F AK++D G+++ E +
Sbjct: 124 HXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 244 PSHGSI-VNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEA 286
+ + PE G + SDIYSFGV LLE++TG A
Sbjct: 182 XXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPA 224
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 137/274 (50%), Gaps = 38/274 (13%)
Query: 95 IGFGSFGPVYKGLLRDTVVAIK---------RRVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
IG GSFG V++ + VA+K RV EF+ EV + +RH N+V +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVN----EFLREVAIMKRLRHPNIVLFM 100
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
G Q +V EYL GS+ L+++G + +L+ ++R+S+A AKG+ +LH+ P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKL-----LENIEEAGPSHGSIVNVFRDPEVEE 260
P+VH+N K+ N+LVD+ + KV D G+S+L L + AG V RD E
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD---EP 215
Query: 261 SGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA--- 317
S +E SD+YSFGV L EL T Q+ ++ A + + RL ++ ++A
Sbjct: 216 S---NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAII 272
Query: 318 -GTFTTEGMR--------DLIRLTLQCMSSPGRR 342
G +T E + DL+R ++ P R
Sbjct: 273 EGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNR 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 137/274 (50%), Gaps = 38/274 (13%)
Query: 95 IGFGSFGPVYKGLLRDTVVAIK---------RRVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
IG GSFG V++ + VA+K RV EF+ EV + +RH N+V +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVN----EFLREVAIMKRLRHPNIVLFM 100
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
G Q +V EYL GS+ L+++G + +L+ ++R+S+A AKG+ +LH+ P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKL-----LENIEEAGPSHGSIVNVFRDPEVEE 260
P+VH++ K+ N+LVD+ + KV D G+S+L L + AG V RD E
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRD---EP 215
Query: 261 SGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA--- 317
S +E SD+YSFGV L EL T Q+ ++ A + + RL ++ ++A
Sbjct: 216 S---NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAII 272
Query: 318 -GTFTTEGMR--------DLIRLTLQCMSSPGRR 342
G +T E + DL+R ++ P R
Sbjct: 273 EGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNR 306
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 30/285 (10%)
Query: 94 LIGFGSFGPVYKGLLR------DTVVAIKR-RVG---SPRQEFVAEVTYLSEIRHRNLVT 143
+IG G FG VYKG+L+ + VAIK + G R +F+ E + + H N++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
L G + M++ EY+ NG++ L E E S Q V + G A G+ +L ++
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL----QLVGMLRGIAAGMKYLANM 166
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA--GPSHGSIVNVFRDPEVEES 261
VH++ N+LV+ N + KV+D G+S++LE+ EA S G I + PE
Sbjct: 167 N--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 262 GVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGTFT 321
F+ SD++SFG+ + E++T E + L ++E + + ++ F RL
Sbjct: 225 RKFTSASDVWSFGIVMWEVMTYGERPYW-ELSNHEVM------KAINDGF---RLPTPMD 274
Query: 322 TEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTF 366
+ +L +QC RRPK +++ L+++ +L T
Sbjct: 275 CPSA--IYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTL 317
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 144/298 (48%), Gaps = 36/298 (12%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVA 128
G+R S ++ E Q + IG GSFG VYKG V V +P Q F
Sbjct: 11 GSRD-SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN 69
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVS 188
EV L + RH N++ +GY + +V ++ S+ +HL+ S TK E K+ +
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHA----SETKFEMKKLID 124
Query: 189 IALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH-- 246
IA A+G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ E +G SH
Sbjct: 125 IARQTARGMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLAT--EKSRWSG-SHQF 179
Query: 247 ----GSIVNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALI 299
GSI+ + PEV ++S +S SD+Y+FG+ L EL+TGQ ++ + + +I
Sbjct: 180 EQLSGSIL--WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQII 235
Query: 300 QWV-RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
+ V R LS + + + + RL +C+ RP ++ E+E +
Sbjct: 236 EMVGRGSLSPD-------LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 78 SMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVAEVTYL 133
S ++ E Q + IG GSFG VYKG V V +P Q F EV L
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ RH N++ +GY + +V ++ S+ +HL+ S TK E K+ + IA
Sbjct: 63 RKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQT 117
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH------G 247
A+G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ + SH G
Sbjct: 118 ARGMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKS---RWSGSHQFEQLSG 172
Query: 248 SIVNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWV-R 303
SI+ + PEV ++S +S SD+Y+FG+ L EL+TGQ ++ + + +I+ V R
Sbjct: 173 SIL--WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIEMVGR 228
Query: 304 SRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
LS + + + + RL +C+ RP ++ E+E +
Sbjct: 229 GSLSPD-------LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 145/299 (48%), Gaps = 38/299 (12%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVA 128
G+R + ++ E Q + IG GSFG VYKG V V +P Q F
Sbjct: 11 GSRD-AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN 69
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRV 187
EV L + RH N++ +GY Q+ +V ++ S+ +HL+ S TK E K+ +
Sbjct: 70 EVGVLRKTRHVNILLFMGYS--TAPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLI 123
Query: 188 SIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH- 246
IA A+G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ E +G SH
Sbjct: 124 DIARQTARGMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLAT--EKSRWSG-SHQ 178
Query: 247 -----GSIVNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEAL 298
GSI+ + PEV ++S +S SD+Y+FG+ L EL+TGQ ++ + + +
Sbjct: 179 FEQLSGSIL--WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQI 234
Query: 299 IQWV-RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
I+ V R LS + + + + RL +C+ RP ++ E+E +
Sbjct: 235 IEMVGRGSLSPD-------LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 138/300 (46%), Gaps = 34/300 (11%)
Query: 71 PQGARQFSME-ELEQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG--- 120
P+G+ Q E E S ++G G FG V G L+ + VAIK +VG
Sbjct: 16 PRGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 75
Query: 121 SPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTK 180
R++F+ E + + + H N++ L G ++ M+V EY+ NGS+ + L + +
Sbjct: 76 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQ 131
Query: 181 LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE 240
Q V + G A G+ +L + VH++ N+L++ N + KV+D G+S++LE+
Sbjct: 132 FTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 189
Query: 241 EAGPSH--GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEAL 298
EA + G I + PE F+ SD++S+G+ L E+++ E +
Sbjct: 190 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---------- 239
Query: 299 IQWVRSRLSSNNFVD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
W S VD +RL L +L L C RPK E +++ L+++
Sbjct: 240 --WEMSNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 33/287 (11%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYL 133
E S ++G G FG V G L+ + VAIK +VG R++F+ E + +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ H N++ L G ++ M+V EY+ NGS+ + L + + Q V + G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGI 156
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVN 251
A G+ +L + VH++ N+L++ N + KV+D G+S++LE+ EA + G I
Sbjct: 157 ASGMKYLSDMG--FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNF 311
+ PE F+ SD++S+G+ L E++ SY W S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM------------SYGERPYWEMSNQDVIKA 262
Query: 312 VD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
VD +RL L +L L C RPK E +++ L+++
Sbjct: 263 VDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 33/287 (11%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYL 133
E S ++G G FG V G L+ + VAIK +VG R++F+ E + +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ H N++ L G ++ M+V EY+ NGS+ + L + + Q V + G
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGI 127
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVN 251
A G+ +L + VH++ N+L++ N + KV+D G+S++LE+ EA + G I
Sbjct: 128 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNF 311
+ PE F+ SD++S+G+ L E+++ E + W S
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEMSNQDVIKA 233
Query: 312 VD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
VD +RL L +L L C RPK E +++ L+++
Sbjct: 234 VDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 33/287 (11%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYL 133
E S ++G G FG V G L+ + VAIK +VG R++F+ E + +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ H N++ L G ++ M+V EY+ NGS+ + L + + Q V + G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGI 156
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVN 251
A G+ +L + VH++ N+L++ N + KV+D G+S++LE+ EA + G I
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNF 311
+ PE F+ SD++S+G+ L E++ SY W S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM------------SYGERPYWEMSNQDVIKA 262
Query: 312 VD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
VD +RL L +L L C RPK E +++ L+++
Sbjct: 263 VDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 33/287 (11%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYL 133
E S ++G G FG V G L+ + VAIK +VG R++F+ E + +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ H N++ L G ++ M+V EY+ NGS+ + L + + Q V + G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGI 156
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVN 251
A G+ +L + VH++ N+L++ N + KV+D G+S++LE+ EA + G I
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNF 311
+ PE F+ SD++S+G+ L E++ SY W S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM------------SYGERPYWEMSNQDVIKA 262
Query: 312 VD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
VD +RL L +L L C RPK E +++ L+++
Sbjct: 263 VDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 33/287 (11%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYL 133
E S ++G G FG V G L+ + VAIK +VG R++F+ E + +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ H N++ L G ++ M+V EY+ NGS+ + L + + Q V + G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGI 156
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVN 251
A G+ +L + VH++ N+L++ N + KV+D G+S++LE+ EA + G I
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNF 311
+ PE F+ SD++S+G+ L E++ SY W S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM------------SYGERPYWEMSNQDVIKA 262
Query: 312 VD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
VD +RL L +L L C RPK E +++ L+++
Sbjct: 263 VDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 33/287 (11%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYL 133
E S ++G G FG V G L+ + VAIK +VG R++F+ E + +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ H N++ L G ++ M+V EY+ NGS+ + L + + Q V + G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGI 156
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVN 251
A G+ +L + VH++ N+L++ N + KV+D G+S++LE+ EA + G I
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNF 311
+ PE F+ SD++S+G+ L E++ SY W S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM------------SYGERPYWEMSNQDVIKA 262
Query: 312 VD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
VD +RL L +L L C RPK E +++ L+++
Sbjct: 263 VDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 33/287 (11%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYL 133
E S ++G G FG V G L+ + VAIK +VG R++F+ E + +
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ H N++ L G ++ M+V EY+ NGS+ + L + + Q V + G
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGI 154
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVN 251
A G+ +L + VH++ N+L++ N + KV+D G+S++LE+ EA + G I
Sbjct: 155 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNF 311
+ PE F+ SD++S+G+ L E+++ E + W S
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEMSNQDVIKA 260
Query: 312 VD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
VD +RL L +L L C RPK E +++ L+++
Sbjct: 261 VDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 33/287 (11%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYL 133
E S ++G G FG V G L+ + VAIK +VG R++F+ E + +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ H N++ L G ++ M+V EY+ NGS+ + L + + Q V + G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGI 156
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVN 251
A G+ +L + VH++ N+L++ N + KV+D G++++LE+ EA + G I
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNF 311
+ PE F+ SD++S+G+ L E++ SY W S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM------------SYGERPYWEMSNQDVIKA 262
Query: 312 VD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
VD +RL L +L L C RPK E +++ L+++
Sbjct: 263 VDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 33/287 (11%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYL 133
E S ++G G FG V G L+ + VAIK +VG R++F+ E + +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ H N++ L G ++ M+V EY+ NGS+ + L + + Q V + G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGI 156
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVN 251
A G+ +L + VH++ N+L++ N + KV+D G+ ++LE+ EA + G I
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNF 311
+ PE F+ SD++S+G+ L E++ SY W S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM------------SYGERPYWEMSNQDVIKA 262
Query: 312 VD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
VD +RL L +L L C RPK E +++ L+++
Sbjct: 263 VDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 9/209 (4%)
Query: 78 SMEELEQATKQFSETSLIGFGSFGPVYKGLLR--DTVVAIK--RRVGSPRQEFVAEVTYL 133
SM++ E + +G G +G VY G+ + VA+K + +EF+ E +
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 82
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
EI+H NLV LLG C +V EY+P G++ ++L E E T + + +A
Sbjct: 83 KEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL---LYMATQI 139
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF 253
+ + +L K +H++ N LV EN + KVAD G+S+L+ + +
Sbjct: 140 SSAMEYLE--KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKW 197
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVT 282
PE FS SD+++FGV L E+ T
Sbjct: 198 TAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E+ L Q V +A A G+ ++ + VH++
Sbjct: 76 PIX-IVTEYMSKGSLLDFLKG---ETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 129
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 190 SFGILLTELTT 200
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 334
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E+ L Q V +A A G+ ++ + VH++
Sbjct: 335 PI-YIVTEYMSKGSLLDFLKG---ETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 388
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 449 SFGILLTELTT 459
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 141/305 (46%), Gaps = 46/305 (15%)
Query: 77 FSMEELEQATKQFSET---------SLIGFGSFGPVYKGLL-----RDTVVAIKR----R 118
F+ E+ +A ++F++ +IG G FG V G L R+ VAIK
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 119 VGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS 178
R++F++E + + + H N++ L G ++ M++ E++ NGS+ + L + +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ----ND 129
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
+ Q V + G A G+ +L + VH++ N+LV+ N + KV+D G+S+ LE+
Sbjct: 130 GQFTVIQLVGMLRGIAAGMKYLADMN--YVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 239 IEEAGPSH-----GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLG 293
+ + P++ G I + PE + F+ SD++S+G+ + E+++ E +
Sbjct: 188 -DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY----- 241
Query: 294 SYEALIQWVRSRLSSNNFV--DHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMT 351
W + N + D+RL L +L L C RPK ++
Sbjct: 242 -------WDMTNQDVINAIEQDYRLPPPMDCPSA--LHQLMLDCWQKDRNHRPKFGQIVN 292
Query: 352 ELERI 356
L+++
Sbjct: 293 TLDKM 297
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 119/231 (51%), Gaps = 23/231 (9%)
Query: 71 PQGARQFSME-ELEQATKQFSETSLIGFGSFGPVYKGLLR-DTVVAIKRRVGSPRQEFVA 128
P+G R S E+E + S + IG GSFG VYKG D V I + V ++F A
Sbjct: 21 PRGQRDSSYYWEIEASEVMLS--TRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQA 78
Query: 129 ---EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV L + RH N++ +GY ++ +V ++ S+ HL+ TK + Q
Sbjct: 79 FRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHV----QETKFQMFQ 133
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKL---LENIEEA 242
+ IA A+G+ +LH+ ++H++ K+ N+ + E K+ D G++ + ++
Sbjct: 134 LIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191
Query: 243 GPSHGSIVNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQ-EASHI 289
GS++ + PEV +++ FS SD+YS+G+ L EL+TG+ SHI
Sbjct: 192 EQPTGSVL--WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E L Q V +A A G+ ++ + VH++
Sbjct: 86 PI-YIVIEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 139
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 200 SFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + +IRH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E L Q V +A A G+ ++ + VH++
Sbjct: 86 PI-YIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 139
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 200 SFGILLTELTT 210
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 117/241 (48%), Gaps = 30/241 (12%)
Query: 72 QGARQF----SMEELEQATKQFSET---------SLIGFGSFGPVYKGLL-----RDTVV 113
QG R F + E+ QA ++F++ +IG G FG V G L R+ V
Sbjct: 1 QGVRTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICV 60
Query: 114 AIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNH 169
AIK R++F++E + + + H N++ L G + M++ EY+ NGS+
Sbjct: 61 AIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF 120
Query: 170 LYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVAD 229
L + + + Q V + G G+ +L + VH++ N+LV+ N + KV+D
Sbjct: 121 LRK----NDGRFTVIQLVGMLRGIGSGMKYLSDMS--AVHRDLAARNILVNSNLVCKVSD 174
Query: 230 TGISKLLENIEEAGPSH--GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
G+S++LE+ EA + G I + PE F+ SD++S+G+ + E+++ E
Sbjct: 175 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
Query: 288 H 288
+
Sbjct: 235 Y 235
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 40/289 (13%)
Query: 93 SLIGFGSFGPVYK------GLLRDTVVAIKRRVGSP--RQEFVAEVTYLSEI-RHRNLVT 143
+IG G+FG V K GL D + + S ++F E+ L ++ H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL-----------ESSTKLEFKQRVSIALG 192
LLG C+ GY L EY P+G++ + L ++ + +++ L +Q + A
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 193 AAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV 252
A+G+ +L + +H+N N+LV EN++AK+AD G+S+ E + G +
Sbjct: 148 VARGMDYLS--QKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVY--VKKTMGRLPVR 203
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVT--GQEASHIVSLGSYEALIQWVRSRLSSNN 310
+ E V++ SD++S+GV L E+V+ G + YE L Q R N
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN- 262
Query: 311 FVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERIHEK 359
+ + DL+R QC RP ++ L R+ E+
Sbjct: 263 ----------CDDEVYDLMR---QCWREKPYERPSFAQILVSLNRMLEE 298
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 25/224 (11%)
Query: 74 ARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVAE 129
R+ S ++ E Q + IG GSFG VYKG V V +P Q F E
Sbjct: 23 GRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 82
Query: 130 VTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSI 189
V L + RH N++ +GY + +V ++ S+ +HL+ TK E + + I
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHII----ETKFEMIKLIDI 137
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--- 246
A A+G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ E +G SH
Sbjct: 138 ARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSRWSG-SHQFE 192
Query: 247 ---GSIVNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQ 284
GSI+ + PEV ++ +S SD+Y+FG+ L EL+TGQ
Sbjct: 193 QLSGSIL--WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 33/287 (11%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYL 133
E S ++G G FG V G L+ + VAIK +VG R++F+ E + +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ H N++ L G ++ M+V E + NGS+ + L + + Q V + G
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK----HDAQFTVIQLVGMLRGI 127
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVN 251
A G+ +L + VH++ N+L++ N + KV+D G+S++LE+ EA + G I
Sbjct: 128 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNF 311
+ PE F+ SD++S+G+ L E+++ E + W S
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEMSNQDVIKA 233
Query: 312 VD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
VD +RL L +L L C RPK E +++ L+++
Sbjct: 234 VDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 33/287 (11%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYL 133
E S ++G G FG V G L+ + VAIK +VG R++F+ E + +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ H N++ L G ++ M+V E + NGS+ + L + + Q V + G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK----HDAQFTVIQLVGMLRGI 156
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVN 251
A G+ +L + VH++ N+L++ N + KV+D G+S++LE+ EA + G I
Sbjct: 157 ASGMKYLSDMGA--VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNF 311
+ PE F+ SD++S+G+ L E++ SY W S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM------------SYGERPYWEMSNQDVIKA 262
Query: 312 VD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
VD +RL L +L L C RPK E +++ L+++
Sbjct: 263 VDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E+ L Q V +A A G+ ++ + VH++
Sbjct: 252 PI-YIVTEYMSKGSLLDFLKG---ETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 305
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 366 SFGILLTELTT 376
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 25/224 (11%)
Query: 74 ARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVAE 129
R+ S ++ E Q + IG GSFG VYKG V V +P Q F E
Sbjct: 15 GRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 74
Query: 130 VTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSI 189
V L + RH N++ +GY + +V ++ S+ +HL+ TK E + + I
Sbjct: 75 VGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHII----ETKFEMIKLIDI 129
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--- 246
A A+G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ E +G SH
Sbjct: 130 ARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSRWSG-SHQFE 184
Query: 247 ---GSIVNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQ 284
GSI+ + PEV ++ +S SD+Y+FG+ L EL+TGQ
Sbjct: 185 QLSGSIL--WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E+ L Q V +A A G+ ++ + VH++
Sbjct: 252 PI-YIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 305
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 366 SFGILLTELTT 376
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E+ L Q V +A A G+ ++ + VH++
Sbjct: 79 PI-YIVTEYMSKGSLLDFLKG---ETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 132
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 193 SFGILLTELTT 203
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 33/287 (11%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYL 133
E S ++G G FG V G L+ + VAIK +VG R++F+ E + +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ H N++ L G ++ M+V E + NGS+ + L + + Q V + G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK----HDAQFTVIQLVGMLRGI 156
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVN 251
A G+ +L + VH++ N+L++ N + KV+D G+S++LE+ EA + G I
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNF 311
+ PE F+ SD++S+G+ L E++ SY W S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM------------SYGERPYWEMSNQDVIKA 262
Query: 312 VD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
VD +RL L +L L C RPK E +++ L+++
Sbjct: 263 VDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E L Q V +A A G+ ++ + VH++
Sbjct: 86 PI-YIVIEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 139
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 200 SFGILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E+ L Q V +A A G+ ++ + VH++
Sbjct: 252 PI-YIVGEYMSKGSLLDFLKG---ETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 305
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 366 SFGILLTELTT 376
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 94 LIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYLSEIRHRNLVTL 144
+IG G G V G LR D VAIK + G R++F++E + + + H N++ L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLK 204
G + M+V EY+ NGS+ L + Q V + G G+ +L L
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRT----HDGQFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 205 PPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVNVFRDPEVEESG 262
VH++ NVLVD N + KV+D G+S++LE+ +A + G I + PE
Sbjct: 172 --YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 263 VFSEMSDIYSFGVFLLELVT 282
FS SD++SFGV + E++
Sbjct: 230 TFSSASDVWSFGVVMWEVLA 249
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 94 LIGFGSFGPVYKGLLR-----DTVVAIKR-RVG---SPRQEFVAEVTYLSEIRHRNLVTL 144
+IG G G V G LR D VAIK + G R++F++E + + + H N++ L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLK 204
G + M+V EY+ NGS+ L + Q V + G G+ +L L
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRT----HDGQFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 205 PPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG--PSHGSIVNVFRDPEVEESG 262
VH++ NVLVD N + KV+D G+S++LE+ +A + G I + PE
Sbjct: 172 --YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 263 VFSEMSDIYSFGVFLLELVT 282
FS SD++SFGV + E++
Sbjct: 230 TFSSASDVWSFGVVMWEVLA 249
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E L Q V +A A G+ ++ + VH++
Sbjct: 86 PI-YIVCEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 139
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 200 SFGILLTELTT 210
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 139/299 (46%), Gaps = 38/299 (12%)
Query: 78 SMEELEQATKQFSET---------SLIGFGSFGPVYKGLL-----RDTVVAIKR-RVG-- 120
+ E+ QA +F++ +IG G FG V G L R+ VAIK +VG
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 121 -SPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESST 179
R++F+ E + + + H N++ L G ++ M+V EY+ NGS+ L + +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKK----NDG 119
Query: 180 KLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENI 239
+ Q V + G + G+ +L + VH++ N+L++ N + KV+D G+S++LE+
Sbjct: 120 QFTVIQLVGMLRGISAGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
Query: 240 EEAGPSH--GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA 297
EA + G I + PE F+ SD++S+G+ + E+V+ E + +E
Sbjct: 178 PEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY------WEM 231
Query: 298 LIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
Q V + +RL L +L L C RPK + ++ L+++
Sbjct: 232 TNQDVIKAVEEG----YRLPSPMDCPAA--LYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 25/224 (11%)
Query: 74 ARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVAE 129
R+ S ++ E Q + IG GSFG VYKG V V +P Q F E
Sbjct: 23 GRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 82
Query: 130 VTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSI 189
V L + RH N++ +GY + +V ++ S+ +HL+ TK E + + I
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHII----ETKFEMIKLIDI 137
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--- 246
A A+G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ + SH
Sbjct: 138 ARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS---RWSGSHQFE 192
Query: 247 ---GSIVNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQ 284
GSI+ + PEV ++ +S SD+Y+FG+ L EL+TGQ
Sbjct: 193 QLSGSIL--WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E L Q V +A A G+ ++ + VH++
Sbjct: 86 PI-YIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 139
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 200 SFGILLTELTT 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 25/224 (11%)
Query: 74 ARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVAE 129
R+ S ++ E Q + IG GSFG VYKG V V +P Q F E
Sbjct: 22 GRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 81
Query: 130 VTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSI 189
V L + RH N++ +GY + +V ++ S+ +HL+ TK E + + I
Sbjct: 82 VGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHII----ETKFEMIKLIDI 136
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--- 246
A A+G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ + SH
Sbjct: 137 ARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS---RWSGSHQFE 191
Query: 247 ---GSIVNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQ 284
GSI+ + PEV ++ +S SD+Y+FG+ L EL+TGQ
Sbjct: 192 QLSGSIL--WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E+ L Q V ++ A G+ ++ + VH++
Sbjct: 83 PI-YIVTEYMNKGSLLDFLKG---ETGKYLRLPQLVDMSAQIASGMAYVERMN--YVHRD 136
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 197 SFGILLTELTT 207
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E L Q V +A A G+ ++ + VH++
Sbjct: 77 PI-YIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 130
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 191 SFGILLTELTT 201
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 40/289 (13%)
Query: 93 SLIGFGSFGPVYK------GLLRDTVVAIKRRVGS--PRQEFVAEVTYLSEI-RHRNLVT 143
+IG G+FG V K GL D + + S ++F E+ L ++ H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL-----------ESSTKLEFKQRVSIALG 192
LLG C+ GY L EY P+G++ + L ++ + +++ L +Q + A
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 193 AAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV 252
A+G+ +L + +H++ N+LV EN++AK+AD G+S+ E + G +
Sbjct: 141 VARGMDYLS--QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--VKKTMGRLPVR 196
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVT--GQEASHIVSLGSYEALIQWVRSRLSSNN 310
+ E V++ SD++S+GV L E+V+ G + YE L Q R N
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN- 255
Query: 311 FVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERIHEK 359
+ + DL+R QC RP ++ L R+ E+
Sbjct: 256 ----------CDDEVYDLMR---QCWREKPYERPSFAQILVSLNRMLEE 291
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E L Q V +A A G+ ++ + VH++
Sbjct: 75 PI-YIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 128
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 189 SFGILLTELTT 199
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 40/289 (13%)
Query: 93 SLIGFGSFGPVYK------GLLRDTVVAIKRRVGS--PRQEFVAEVTYLSEI-RHRNLVT 143
+IG G+FG V K GL D + + S ++F E+ L ++ H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL-----------ESSTKLEFKQRVSIALG 192
LLG C+ GY L EY P+G++ + L ++ + +++ L +Q + A
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 193 AAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV 252
A+G+ +L + +H++ N+LV EN++AK+AD G+S+ E + G +
Sbjct: 151 VARGMDYLS--QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--VKKTMGRLPVR 206
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVT--GQEASHIVSLGSYEALIQWVRSRLSSNN 310
+ E V++ SD++S+GV L E+V+ G + YE L Q R N
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN- 265
Query: 311 FVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERIHEK 359
+ + DL+R QC RP ++ L R+ E+
Sbjct: 266 ----------CDDEVYDLMR---QCWREKPYERPSFAQILVSLNRMLEE 301
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E+ L Q V ++ A G+ ++ + VH++
Sbjct: 83 PI-YIVTEYMNKGSLLDFLKG---ETGKYLRLPQLVDMSAQIASGMAYVERMN--YVHRD 136
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 197 SFGILLTELTT 207
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 137/301 (45%), Gaps = 42/301 (13%)
Query: 78 SMEELEQATKQFSET---------SLIGFGSFGPVYKGLL-----RDTVVAIKR-RVG-- 120
+ E+ +A QF++ +IG G FG V G L RD VAIK +VG
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 121 -SPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESST 179
R++F+ E + + + H N+V L G + M+V E++ NG++ L +
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRK----HDG 140
Query: 180 KLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENI 239
+ Q V + G A G+ +L + VH++ N+LV+ N + KV+D G+S+++E+
Sbjct: 141 QFTVIQLVGMLRGIAAGMRYLADMG--YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 240 EEA--GPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA 297
EA + G I + PE + F+ SD++S+G+ + E+++ E +
Sbjct: 199 PEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY--------- 249
Query: 298 LIQWVRSRLSSNNFVD--HRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELER 355
W S ++ +RL L +L L C RPK E ++ L++
Sbjct: 250 ---WDMSNQDVIKAIEEGYRLPAPMDCPA--GLHQLMLDCWQKERAERPKFEQIVGILDK 304
Query: 356 I 356
+
Sbjct: 305 M 305
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ G + + L E L Q V +A A G+ ++ + VH++
Sbjct: 86 PI-YIVMEYMSKGCLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 139
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 200 SFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E L Q V +A A G+ ++ + VH++
Sbjct: 253 PI-YIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 306
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+ +L+E+ E + PE G F+ SD++
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 367 SFGILLTELTT 377
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 80 EELEQATKQFSETSLIGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
+E E + +G G FG V Y G + V ++K+ SP F+AE + +
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQ 72
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H+ LV L Q ++ EY+ NGS+ + L S KL + + +A A+
Sbjct: 73 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAE 128
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ + +H++ + AN+LV + K+AD G+++L+E+ E +
Sbjct: 129 GMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 186
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE G F+ SD++SFG+ L E+VT
Sbjct: 187 PEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G FG V Y G + V ++K+ SP F+AE + +++H+ LV L Q
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ EY+ NGS+ + L S KL + + +A A+G+ + +H+
Sbjct: 76 EPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHR 129
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
N + AN+LV + K+AD G+++L+E+ E + PE G F+ SD+
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 271 YSFGVFLLELVT 282
+SFG+ L E+VT
Sbjct: 190 WSFGILLTEIVT 201
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L E L Q V +A A G+ ++ + VH++
Sbjct: 86 PI-YIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 139
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 200 SFGILLTELTT 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 25/218 (11%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVAEVTYLSE 135
++ E Q + IG GSFG VYKG V V +P Q F EV L +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
RH N++ +GY + +V ++ S+ +HL+ TK E + + IA A+
Sbjct: 61 TRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQ 115
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH------GSI 249
G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ E +G SH GSI
Sbjct: 116 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSRWSG-SHQFEQLSGSI 170
Query: 250 VNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQ 284
+ + PEV ++ +S SD+Y+FG+ L EL+TGQ
Sbjct: 171 L--WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 80 EELEQATKQFSETSLIGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
+E E + +G G FG V Y G + V ++K+ SP F+AE + +
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQ 70
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H+ LV L Q ++ EY+ NGS+ + L S KL + + +A A+
Sbjct: 71 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAE 126
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ + +H++ + AN+LV + K+AD G+++L+E+ E +
Sbjct: 127 GMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 184
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE G F+ SD++SFG+ L E+VT
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 80 EELEQATKQFSETSLIGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
+E E + +G G FG V Y G + V ++K+ SP F+AE + +
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQ 73
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H+ LV L Q ++ EY+ NGS+ + L S KL + + +A A+
Sbjct: 74 LQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAE 129
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ + +H++ + AN+LV + K+AD G+++L+E+ E +
Sbjct: 130 GMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 187
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE G F+ SD++SFG+ L E+VT
Sbjct: 188 PEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDTVVAIKR-RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
K+ IG G FG V G R VA+K + + Q F+AE + ++++RH NLV LL
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL 71
Query: 146 GY-CQQNGYQMLVFEYLPNGSMCNHLYETG---LESSTKLEFKQRVSIALGAAKGLCHLH 201
G ++ G +V EY+ GS+ ++L G L L+F V A+ +G
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG----- 126
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
VH++ NVLV E+ +AKV+D G++K + ++ G + + PE
Sbjct: 127 ---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT----GKLPVKWTAPEALRE 179
Query: 262 GVFSEMSDIYSFGVFLLELVT 282
FS SD++SFG+ L E+ +
Sbjct: 180 AAFSTKSDVWSFGILLWEIYS 200
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 80 EELEQATKQFSETSLIGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
+E E + +G G FG V Y G + V ++K+ SP F+AE + +
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQ 64
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H+ LV L Q ++ EY+ NGS+ + L S KL + + +A A+
Sbjct: 65 LQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAE 120
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ + +H++ + AN+LV + K+AD G+++L+E+ E +
Sbjct: 121 GMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 178
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE G F+ SD++SFG+ L E+VT
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 80 EELEQATKQFSETSLIGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
+E E + +G G FG V Y G + V ++K+ SP F+AE + +
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQ 66
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H+ LV L Q ++ EY+ NGS+ + L S KL + + +A A+
Sbjct: 67 LQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAE 122
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ + +H++ + AN+LV + K+AD G+++L+E+ E +
Sbjct: 123 GMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 180
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE G F+ SD++SFG+ L E+VT
Sbjct: 181 PEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 80 EELEQATKQFSETSLIGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
+E E + +G G FG V Y G + V ++K+ SP F+AE + +
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQ 64
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H+ LV L Q ++ EY+ NGS+ + L S KL + + +A A+
Sbjct: 65 LQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAE 120
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ + +H++ + AN+LV + K+AD G+++L+E+ E +
Sbjct: 121 GMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 178
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE G F+ SD++SFG+ L E+VT
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 80 EELEQATKQFSETSLIGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
+E E + +G G FG V Y G + V ++K+ SP F+AE + +
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQ 65
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H+ LV L Q ++ EY+ NGS+ + L S KL + + +A A+
Sbjct: 66 LQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAE 121
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ + +H++ + AN+LV + K+AD G+++L+E+ E +
Sbjct: 122 GMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 179
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE G F+ SD++SFG+ L E+VT
Sbjct: 180 PEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 78 SMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVAEVTYL 133
S ++ E Q + IG GSFG VYKG V V +P Q F EV L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ RH N++ +GY + +V ++ S+ +HL+ TK E + + IA
Sbjct: 64 RKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQT 118
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH------G 247
A+G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ + SH G
Sbjct: 119 AQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS---RWSGSHQFEQLSG 173
Query: 248 SIVNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQ 284
SI+ + PEV ++ +S SD+Y+FG+ L EL+TGQ
Sbjct: 174 SIL--WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 125/275 (45%), Gaps = 25/275 (9%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDTVVAIKR-RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
K+ ++G G+FG V K R VAIK+ S R+ F+ E+ LS + H N+V L
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLY 68
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
G C LV EY GS+ N L+ G E +S L ++G+ +LHS++P
Sbjct: 69 GACLNP--VCLVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 206 -PLVHKNFKTANVL-VDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGV 263
L+H++ K N+L V + K+ D G + ++ + GS + PEV E
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT--HMTNNKGS--AAWMAPEVFEGSN 180
Query: 264 FSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGTFTTE 323
+SE D++S+G+ L E++T ++ +G I W V +
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKP--FDEIGGPAFRIMWA---------VHNGTRPPLIKN 229
Query: 324 GMRDLIRLTLQCMSSPGRRRPKME---IVMTELER 355
+ + L +C S +RP ME +MT L R
Sbjct: 230 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLRDTV-VAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G T VAIK + G+ E F+ E + ++RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ G + + L E L Q V +A A G+ ++ + VH++
Sbjct: 86 PI-YIVTEYMSKGCLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 139
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV EN + KVAD G+++L+E+ E + PE G F+ SD++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 272 SFGVFLLELVT 282
SFG+ L EL T
Sbjct: 200 SFGILLTELTT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 80 EELEQATKQFSETSLIGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
+E E + +G G FG V Y G + V ++K+ SP F+AE + +
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQ 70
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H+ LV L Q ++ EY+ NGS+ + L S KL + + +A A+
Sbjct: 71 LQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAE 126
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ + +H++ + AN+LV + K+AD G+++L+E+ E +
Sbjct: 127 GMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 184
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE G F+ SD++SFG+ L E+VT
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 80 EELEQATKQFSETSLIGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
+E E + +G G FG V Y G + V ++K+ SP F+AE + +
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQ 74
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H+ LV L Q ++ EY+ NGS+ + L S KL + + +A A+
Sbjct: 75 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAE 130
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ + +H++ + AN+LV + K+AD G+++L+E+ E +
Sbjct: 131 GMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 188
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE G F+ SD++SFG+ L E+VT
Sbjct: 189 PEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 78 SMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVAEVTYL 133
S ++ E Q + IG GSFG VYKG V V +P Q F EV L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ RH N++ +GY + +V ++ S+ +HL+ TK E + + IA
Sbjct: 64 RKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQT 118
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH------G 247
A+G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ + SH G
Sbjct: 119 AQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS---RWSGSHQFEQLSG 173
Query: 248 SIVNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQ 284
SI+ + PEV ++ +S SD+Y+FG+ L EL+TGQ
Sbjct: 174 SIL--WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 78 SMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVAEVTYL 133
S ++ E Q + IG GSFG VYKG V V +P Q F EV L
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ RH N++ +GY + +V ++ S+ +HL+ TK E + + IA
Sbjct: 61 RKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQT 115
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH------G 247
A+G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ + SH G
Sbjct: 116 AQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS---RWSGSHQFEQLSG 170
Query: 248 SIVNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQ 284
SI+ + PEV ++ +S SD+Y+FG+ L EL+TGQ
Sbjct: 171 SIL--WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 80 EELEQATKQFSETSLIGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
+E E + +G G FG V Y G + V ++K+ SP F+AE + +
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQ 69
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H+ LV L Q ++ EY+ NGS+ + L S KL + + +A A+
Sbjct: 70 LQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAE 125
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ + +H++ + AN+LV + K+AD G+++L+E+ E +
Sbjct: 126 GMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 183
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE G F+ SD++SFG+ L E+VT
Sbjct: 184 PEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 125/275 (45%), Gaps = 25/275 (9%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDTVVAIKR-RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
K+ ++G G+FG V K R VAIK+ S R+ F+ E+ LS + H N+V L
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLY 67
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
G C LV EY GS+ N L+ G E +S L ++G+ +LHS++P
Sbjct: 68 GACLNP--VCLVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 206 -PLVHKNFKTANVL-VDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGV 263
L+H++ K N+L V + K+ D G + ++ + GS + PEV E
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT--HMTNNKGS--AAWMAPEVFEGSN 179
Query: 264 FSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGTFTTE 323
+SE D++S+G+ L E++T ++ +G I W V +
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKP--FDEIGGPAFRIMWA---------VHNGTRPPLIKN 228
Query: 324 GMRDLIRLTLQCMSSPGRRRPKME---IVMTELER 355
+ + L +C S +RP ME +MT L R
Sbjct: 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 115/228 (50%), Gaps = 20/228 (8%)
Query: 72 QGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLL-----RDTVVAIKR----RVGSP 122
Q R+F+ +E++ + + + +IG G FG V G L R+ VAIK
Sbjct: 2 QAVREFA-KEIDASCIKIEK--VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ 58
Query: 123 RQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLE 182
R++F++E + + + H N++ L G + M++ EY+ NGS+ L + + +
Sbjct: 59 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK----NDGRFT 114
Query: 183 FKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA 242
Q V + G G+ +L + VH++ N+LV+ N + KV+D G+S++LE+ EA
Sbjct: 115 VIQLVGMLRGIGSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 172
Query: 243 GPSH--GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ G I + PE F+ SD++S+G+ + E+++ E +
Sbjct: 173 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 220
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 80 EELEQATKQFSETSLIGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
+E E + +G G FG V Y G + V ++K+ SP F+AE + +
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQ 64
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H+ LV L Q ++ EY+ NGS+ + L S KL + + +A A+
Sbjct: 65 LQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAE 120
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ + +H++ + AN+LV + K+AD G+++L+E+ E +
Sbjct: 121 GMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 178
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE G F+ SD++SFG+ L E+VT
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVAEVTYLSE 135
++ E Q + IG GSFG VYKG V V +P Q F EV L +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
RH N++ +GY + +V ++ S+ +HL+ TK E + + IA A+
Sbjct: 61 TRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQ 115
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH------GSI 249
G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ + SH GSI
Sbjct: 116 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS---RWSGSHQFEQLSGSI 170
Query: 250 VNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQ 284
+ + PEV ++ +S SD+Y+FG+ L EL+TGQ
Sbjct: 171 L--WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 80 EELEQATKQFSETSLIGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
+E E + +G G FG V Y G + V ++K+ SP F+AE + +
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQ 59
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H+ LV L Q ++ EY+ NGS+ + L S KL + + +A A+
Sbjct: 60 LQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAE 115
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ + +H++ + AN+LV + K+AD G+++L+E+ E +
Sbjct: 116 GMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 173
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE G F+ SD++SFG+ L E+VT
Sbjct: 174 PEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDTVVAIK-RRVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
K+ IG G FG V G R VA+K + + Q F+AE + ++++RH NLV LL
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL 80
Query: 146 GY-CQQNGYQMLVFEYLPNGSMCNHLYETG---LESSTKLEFKQRVSIALGAAKGLCHLH 201
G ++ G +V EY+ GS+ ++L G L L+F V A+ +G
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG----- 135
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
VH++ NVLV E+ +AKV+D G++K + ++ G + + PE
Sbjct: 136 ---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT----GKLPVKWTAPEALRE 188
Query: 262 GVFSEMSDIYSFGVFLLELVT 282
FS SD++SFG+ L E+ +
Sbjct: 189 KKFSTKSDVWSFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDTVVAIK-RRVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
K+ IG G FG V G R VA+K + + Q F+AE + ++++RH NLV LL
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL 65
Query: 146 GY-CQQNGYQMLVFEYLPNGSMCNHLYETG---LESSTKLEFKQRVSIALGAAKGLCHLH 201
G ++ G +V EY+ GS+ ++L G L L+F V A+ +G
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG----- 120
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
VH++ NVLV E+ +AKV+D G++K + ++ G + + PE
Sbjct: 121 ---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT----GKLPVKWTAPEALRE 173
Query: 262 GVFSEMSDIYSFGVFLLELVT 282
FS SD++SFG+ L E+ +
Sbjct: 174 KKFSTKSDVWSFGILLWEIYS 194
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 25/218 (11%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPR----QEFVAEVTYLSE 135
++ E Q + IG GSFG VYKG V V +P Q F EV L +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
RH N++ +GY +V ++ S+ +HL+ TK E + + IA A+
Sbjct: 61 TRHVNILLFMGYSTAPQLA-IVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQ 115
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH------GSI 249
G+ +LH+ ++H++ K+ N+ + E+ K+ D G++ + SH GSI
Sbjct: 116 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS---RWSGSHQFEQLSGSI 170
Query: 250 VNVFRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQ 284
+ + PEV ++ +S SD+Y+FG+ L EL+TGQ
Sbjct: 171 L--WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDTVVAIKR-RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
K+ IG G FG V G R VA+K + + Q F+AE + ++++RH NLV LL
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL 252
Query: 146 GY-CQQNGYQMLVFEYLPNGSMCNHLYETG---LESSTKLEFKQRVSIALGAAKGLCHLH 201
G ++ G +V EY+ GS+ ++L G L L+F V A+ +G
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG----- 307
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
VH++ NVLV E+ +AKV+D G++K + ++ G + + PE
Sbjct: 308 ---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT----GKLPVKWTAPEALRE 360
Query: 262 GVFSEMSDIYSFGVFLLELVT 282
FS SD++SFG+ L E+ +
Sbjct: 361 KKFSTKSDVWSFGILLWEIYS 381
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 125 EFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YE 172
+ V+E+ + I +H+N++TLLG C Q+G ++ EY G++ +L Y+
Sbjct: 86 DLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
++ FK VS A+G+ +L S K +H++ NVLV EN + K+AD G+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGL 203
Query: 233 SKLLENIE-EAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ + NI+ ++G + + PE V++ SD++SFGV + E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 37/279 (13%)
Query: 94 LIGFGSFGPVYKGLL-----RDTVVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTL 144
+IG G FG V G L R+ VAIK R++F++E + + + H N++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLK 204
G ++ M++ E++ NGS+ + L + + + Q V + G A G+ +L +
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQ----NDGQFTVIQLVGMLRGIAAGMKYLADMN 129
Query: 205 PPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH-----GSIVNVFRDPEVE 259
VH+ N+LV+ N + KV+D G+S+ LE+ + + P++ G I + PE
Sbjct: 130 --YVHRALAARNILVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 260 ESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFV--DHRLA 317
+ F+ SD++S+G+ + E+++ E + W + N + D+RL
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPY------------WDMTNQDVINAIEQDYRLP 234
Query: 318 GTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
L +L L C RPK ++ L+++
Sbjct: 235 PPMDCPSA--LHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPV----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G G V Y G + V ++K+ SP F+AE + +++H+ LV L Q
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ EY+ NGS+ + L S KL + + +A A+G+ + +H+
Sbjct: 80 EPI-YIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHR 133
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ + AN+LV + K+AD G+++L+E+ E + PE G F+ SD+
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 271 YSFGVFLLELVT 282
+SFG+ L E+VT
Sbjct: 194 WSFGILLTEIVT 205
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 136
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ P+ + PE FS SD+
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 197 WAFGVLLWEIAT 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 142/302 (47%), Gaps = 40/302 (13%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKRRVGS---- 121
P G+ +F+ +E++ + + E +IG G FG V +G L+ ++ VAIK G
Sbjct: 1 PWGSMEFA-KEIDVSYVKIEE--VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER 57
Query: 122 PRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL 181
R+EF++E + + + H N++ L G + M++ E++ NG++ + L + +
Sbjct: 58 QRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL----NDGQF 113
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
Q V + G A G+ +L + VH++ N+LV+ N + KV+D G+S+ LE
Sbjct: 114 TVIQLVGMLRGIASGMRYLAEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEE-NS 170
Query: 242 AGPSH-----GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYE 296
+ P++ G I + PE F+ SD +S+G+ + E+++ E +
Sbjct: 171 SDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY-------- 222
Query: 297 ALIQWVRSRLSSNNFV--DHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELE 354
W S N + D+RL + L +L L C RP+ V++ L+
Sbjct: 223 ----WDMSNQDVINAIEQDYRLPP--PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 276
Query: 355 RI 356
++
Sbjct: 277 KM 278
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLRD-----TVVAIKRRVGSPRQE----FVAEVTYLSEI-RHRN 140
+G G+FG V G+ +D VA+K +E V+E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 141 LVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YETGLESSTKLEFKQRVSI 189
++ LLG C Q+G ++ EY G++ +L Y+ ++ FK VS
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE-EAGPSHGS 248
A+G+ +L S K +H++ NVLV EN + K+AD G+++ + NI+ ++G
Sbjct: 163 TYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + PE V++ SD++SFGV + E+ T
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 94 LIGFGSFGPVYKGLL-----RDTVVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTL 144
+IG G FG V G L R+ VAIK R++F++E + + + H N++ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLK 204
G + M++ EY+ NGS+ L + + + Q V + G G+ +L +
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRK----NDGRFTVIQLVGMLRGIGSGMKYLSDMS 130
Query: 205 PPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVNVFRDPEVEESG 262
VH++ N+LV+ N + KV+D G+S++LE+ EA + G I + PE
Sbjct: 131 --YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 263 VFSEMSDIYSFGVFLLELVTGQEASH 288
F+ SD++S+G+ + E+++ E +
Sbjct: 189 KFTSASDVWSYGIVMWEVMSYGERPY 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 137
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ P+ + PE FS SD+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 198 WAFGVLLWEIAT 209
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 125 EFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YE 172
+ V+E+ + I +H+N++ LLG C Q+G ++ EY G++ +L Y+
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
++ FK VS A+G+ +L S K +H++ NVLV EN + K+AD G+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGL 203
Query: 233 SKLLENIEEAGP-SHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ + NI+ ++G + + PE V++ SD++SFGV + E+ T
Sbjct: 204 ARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 125 EFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YE 172
+ V+E+ + I +H+N++ LLG C Q+G ++ EY G++ +L Y+
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
++ FK VS A+G+ +L S K +H++ NVLV EN + K+AD G+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGL 203
Query: 233 SKLLENIEEAGP-SHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ + NI+ ++G + + PE V++ SD++SFGV + E+ T
Sbjct: 204 ARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 125 EFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YE 172
+ V+E+ + I +H+N++ LLG C Q+G ++ EY G++ +L Y+
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
++ FK VS A+G+ +L S K +H++ NVLV EN + K+AD G+
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGL 249
Query: 233 SKLLENIE-EAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ + NI+ ++G + + PE V++ SD++SFGV + E+ T
Sbjct: 250 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 78 SMEELEQATKQFSETSLIGFGSFGPVYKGLLRD--TVVAIK--RRVGSPRQEFVAEVTYL 133
S+++ E + +G G FG VY+G+ + VA+K + +EF+ E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
EI+H NLV LLG C + ++ E++ G++ ++L E + + + + +A
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQI 118
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF 253
+ + +L K +H++ N LV EN + KVAD G+S+L+ + +
Sbjct: 119 SSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVT 282
PE FS SD+++FGV L E+ T
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 125 EFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YE 172
+ V+E+ + I +H+N++ LLG C Q+G ++ EY G++ +L Y+
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
++ FK VS A+G+ +L S K +H++ NVLV EN + K+AD G+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGL 203
Query: 233 SKLLENIE-EAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ + NI+ ++G + + PE V++ SD++SFGV + E+ T
Sbjct: 204 ARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 78 SMEELEQATKQFSETSLIGFGSFGPVYKGLLRD--TVVAIK--RRVGSPRQEFVAEVTYL 133
S+++ E + +G G +G VY+G+ + VA+K + +EF+ E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
EI+H NLV LLG C + ++ E++ G++ ++L E + + + + +A
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQI 118
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF 253
+ + +L K +H++ N LV EN + KVAD G+S+L+ + +
Sbjct: 119 SSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVT 282
PE FS SD+++FGV L E+ T
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 125 EFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YE 172
+ V+E+ + I +H+N++ LLG C Q+G ++ EY G++ +L Y+
Sbjct: 78 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 137
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
++ FK VS A+G+ +L S K +H++ NVLV EN + K+AD G+
Sbjct: 138 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGL 195
Query: 233 SKLLENIE-EAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ + NI+ ++G + + PE V++ SD++SFGV + E+ T
Sbjct: 196 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 125 EFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YE 172
+ V+E+ + I +H+N++ LLG C Q+G ++ EY G++ +L Y+
Sbjct: 75 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
++ FK VS A+G+ +L S K +H++ NVLV EN + K+AD G+
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGL 192
Query: 233 SKLLENIE-EAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ + NI+ ++G + + PE V++ SD++SFGV + E+ T
Sbjct: 193 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 125 EFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YE 172
+ V+E+ + I +H+N++ LLG C Q+G ++ EY G++ +L Y+
Sbjct: 73 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
++ FK VS A+G+ +L S K +H++ NVLV EN + K+AD G+
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTENNVMKIADFGL 190
Query: 233 SKLLENIE-EAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ + NI+ ++G + + PE V++ SD++SFGV + E+ T
Sbjct: 191 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLLR-DTVVAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G +T VAIK + G+ E F+ E + +++H LV L +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+V EY+ GS+ + L + L+ V +A A G+ ++ + +H++
Sbjct: 77 PI-YIVTEYMNKGSLLDFLKDG---EGRALKLPNLVDMAAQVAAGMAYIERMN--YIHRD 130
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
++AN+LV I K+AD G+++L+E+ E + PE G F+ SD++
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 272 SFGVFLLELVT 282
SFG+ L ELVT
Sbjct: 191 SFGILLTELVT 201
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 125 EFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YE 172
+ V+E+ + I +H+N++ LLG C Q+G ++ EY G++ +L Y+
Sbjct: 86 DLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
++ FK VS A+G+ +L S K +H++ NVLV EN + K+AD G+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGL 203
Query: 233 SKLLENIE-EAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ + NI+ ++G + + PE V++ SD++SFGV + E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 140/316 (44%), Gaps = 58/316 (18%)
Query: 70 GPQGARQFSMEELEQ-ATKQFSETSLIGFGSFGPVYKG-LLRD-TVVAIKRRVGSPR--- 123
G G +F L A + IG G FG V+KG L++D +VVAIK +
Sbjct: 1 GAMGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE 60
Query: 124 -------QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLE 176
QEF EV +S + H N+V L G N +M V E++P C LY L+
Sbjct: 61 TEMIEKFQEFQREVFIMSNLNHPNIVKLYG-LMHNPPRM-VMEFVP----CGDLYHRLLD 114
Query: 177 SSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVL---VDEN--FIAKVADTG 231
+ +++ ++ + L A G+ ++ + PP+VH++ ++ N+ +DEN AKVAD G
Sbjct: 115 KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
Query: 232 ISK--------LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+S+ LL N + P E ++E +D YSF + L ++TG
Sbjct: 175 LSQQSVHSVSGLLGNFQWMAPETIG----------AEEESYTEKADTYSFAMILYTILTG 224
Query: 284 QEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEG---MRDLIRLTLQCMSSPG 340
+ S G + I +R + L T + +R++I L C S
Sbjct: 225 EGPFDEYSYGKIK-FINMIR---------EEGLRPTIPEDCPPRLRNVIEL---CWSGDP 271
Query: 341 RRRPKMEIVMTELERI 356
++RP ++ EL +
Sbjct: 272 KKRPHFSYIVKELSEL 287
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 125 EFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YE 172
+ V+E+ + I +H+N++ LLG C Q+G ++ EY G++ +L Y+
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
++ FK VS A+G+ +L S K +H++ NVLV EN + ++AD G+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMRIADFGL 203
Query: 233 SKLLENIE-EAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ + NI+ ++G + + PE V++ SD++SFGV + E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + + +A + + +L K +H+
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE--KKNFIHR 342
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
N N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 403 WAFGVLLWEIAT 414
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 115/226 (50%), Gaps = 19/226 (8%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVY----KGLLRD---TVVAIK--RRVGSPRQ--EFVA 128
+E E A ++ + + +G GSFG VY KG+++D T VAIK S R+ EF+
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL--YETGLESSTKL---EF 183
E + + E ++V LLG Q +++ E + G + ++L +E++ L
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
+ + +A A G+ +L++ K VH++ N +V E+F K+ D G+++ + +
Sbjct: 123 SKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 244 PSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
++ V + PE + GVF+ SD++SFGV L E+ T E +
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 226
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 38/300 (12%)
Query: 72 QGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLR-----DTVVAIKRRVGS----P 122
+ R+F+ +E++ + + E +IG G FG V +G L+ ++ VAIK G
Sbjct: 4 EAVREFA-KEIDVSYVKIEE--VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ 60
Query: 123 RQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLE 182
R+EF++E + + + H N++ L G + M++ E++ NG++ + L + +
Sbjct: 61 RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL----NDGQFT 116
Query: 183 FKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE----N 238
Q V + G A G+ +L + VH++ N+LV+ N + KV+D G+S+ LE +
Sbjct: 117 VIQLVGMLRGIASGMRYLAEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEAL 298
E G I + PE F+ SD +S+G+ + E+++ E +
Sbjct: 175 PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY---------- 224
Query: 299 IQWVRSRLSSNNFV--DHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
W S N + D+RL + L +L L C RP+ V++ L+++
Sbjct: 225 --WDMSNQDVINAIEQDYRLPP--PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 19/233 (8%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVY----KGLLRD---TVVAIK--RRVGSPR 123
A + +E E A ++ + + +G GSFG VY KG+++D T VAIK S R
Sbjct: 5 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 64
Query: 124 Q--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL--YETGLESST 179
+ EF+ E + + E ++V LLG Q +++ E + G + ++L +E++
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 180 KL---EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL 236
L + + +A A G+ +L++ K VH++ N +V E+F K+ D G+++ +
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 237 ENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ ++ V + PE + GVF+ SD++SFGV L E+ T E +
Sbjct: 183 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 235
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + + +A + + +L K +H+
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE--KKNFIHR 135
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 140/316 (44%), Gaps = 58/316 (18%)
Query: 70 GPQGARQFSMEELEQ-ATKQFSETSLIGFGSFGPVYKG-LLRD-TVVAIKRRV-GSPR-- 123
G G +F L A + IG G FG V+KG L++D +VVAIK + G
Sbjct: 1 GAMGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE 60
Query: 124 -------QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLE 176
QEF EV +S + H N+V L G N +M V E++P C LY L+
Sbjct: 61 TEMIEKFQEFQREVFIMSNLNHPNIVKLYG-LMHNPPRM-VMEFVP----CGDLYHRLLD 114
Query: 177 SSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVL---VDEN--FIAKVADTG 231
+ +++ ++ + L A G+ ++ + PP+VH++ ++ N+ +DEN AKVAD G
Sbjct: 115 KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
Query: 232 --------ISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+S LL N + P E ++E +D YSF + L ++TG
Sbjct: 175 TSQQSVHSVSGLLGNFQWMAPETIG----------AEEESYTEKADTYSFAMILYTILTG 224
Query: 284 QEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEG---MRDLIRLTLQCMSSPG 340
+ S G + I +R + L T + +R++I L C S
Sbjct: 225 EGPFDEYSYGKIK-FINMIR---------EEGLRPTIPEDCPPRLRNVIEL---CWSGDP 271
Query: 341 RRRPKMEIVMTELERI 356
++RP ++ EL +
Sbjct: 272 KKRPHFSYIVKELSEL 287
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + + +A + + +L K +H+
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE--KKNFIHR 135
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 136
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 197 WAFGVLLWEIAT 208
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 339
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
N N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 400 WAFGVLLWEIAT 411
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 19/233 (8%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVY----KGLLRD---TVVAIK--RRVGSPR 123
A F +E E A ++ + + +G GSFG VY KG+++D T VAIK S R
Sbjct: 2 AADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 61
Query: 124 Q--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL--YETGLESST 179
+ EF+ E + + E ++V LLG Q +++ E + G + ++L +E++
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 180 KL---EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL 236
L + + +A A G+ +L++ K VH++ N +V E+F K+ D G+++ +
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 179
Query: 237 ENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ ++ V + PE + GVF+ SD++SFGV L E+ T E +
Sbjct: 180 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 232
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 11/215 (5%)
Query: 72 QGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFV 127
QG+ + E+E+ + +G G +G VY+G+ + VA+K + +EF+
Sbjct: 13 QGSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 70
Query: 128 AEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRV 187
E + EI+H NLV LLG C + ++ E++ G++ ++L E + + +
Sbjct: 71 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---L 127
Query: 188 SIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHG 247
+A + + +L K +H++ N LV EN + KVAD G+S+L+ +
Sbjct: 128 YMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 185
Query: 248 SIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ PE FS SD+++FGV L E+ T
Sbjct: 186 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 78 SMEELEQATKQFSETSLIGFGSFGPVYKGLLRD--TVVAIK--RRVGSPRQEFVAEVTYL 133
S+++ E + +G G +G VY+G+ + VA+K + +EF+ E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
EI+H NLV LLG C + ++ E++ G++ ++L E + + + + +A
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQI 118
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF 253
+ + +L K +H++ N LV EN + KVAD G+S+L+ + +
Sbjct: 119 SSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKW 176
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVT 282
PE FS SD+++FGV L E+ T
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 381
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
N N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 442 WAFGVLLWEIAT 453
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 140
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 15/171 (8%)
Query: 125 EFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YE 172
+ V+E+ + I +H+N++ LLG C Q+G ++ Y G++ +L Y+
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
++ FK VS A+G+ +L S K +H++ NVLV EN + K+AD G+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGL 203
Query: 233 SKLLENIE-EAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ + NI+ ++G + + PE V++ SD++SFGV + E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + + +A + + +L K +H+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE--KKNFIHR 135
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 9/214 (4%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVA 128
GA + ++ E + +G G +G VY+G+ + VA+K + +EF+
Sbjct: 1 GAMDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK 60
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVS 188
E + EI+H NLV LLG C + ++ E++ G++ ++L E + + +
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LY 117
Query: 189 IALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS 248
+A + + +L K +H++ N LV EN + KVAD G+S+L+ +
Sbjct: 118 MATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 175
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ PE FS SD+++FGV L E+ T
Sbjct: 176 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + + +A + + +L K +H+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE--KKNFIHR 140
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + + +A + + +L K +H+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE--KKNFIHR 135
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 123/249 (49%), Gaps = 20/249 (8%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVY----KGLLRD-- 110
G G A+ P + A + +E E A ++ + + +G GSFG VY KG+++D
Sbjct: 18 GNGVLYASVNPEYF-SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEP 76
Query: 111 -TVVAIK--RRVGSPRQ--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGS 165
T VAIK S R+ EF+ E + + E ++V LLG Q +++ E + G
Sbjct: 77 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 136
Query: 166 MCNHL--YETGLESSTKL---EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVD 220
+ ++L +E++ L + + +A A G+ +L++ K VH++ N +V
Sbjct: 137 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVA 194
Query: 221 ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLE 279
E+F K+ D G+++ + + ++ V + PE + GVF+ SD++SFGV L E
Sbjct: 195 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 254
Query: 280 LVTGQEASH 288
+ T E +
Sbjct: 255 IATLAEQPY 263
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 125/279 (44%), Gaps = 39/279 (13%)
Query: 95 IGFGSFGPVYKGLLR--DTVVAIK--RRVGSP--RQEFVAEVTYLSEIRHRNLVTLLGYC 148
IG G+FG V+ G LR +T+VA+K R P + +F+ E L + H N+V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 149 QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLV 208
Q +V E + G L G +L K + + AA G+ +L S +
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLES--KCCI 235
Query: 209 HKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV---FRDPEVEESGVFS 265
H++ N LV E + K++D G+S+ E + + G + V + PE G +S
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 266 EMSDIYSFGVFLLELVTGQEASHIVSLGS--YEALIQWVRSRLSSNNFVDH--RLAGTFT 321
SD++SFG+ L E SLG+ Y L S + FV+ RL
Sbjct: 294 SESDVWSFGILLWE---------TFSLGASPYPNL-----SNQQTREFVEKGGRLP---C 336
Query: 322 TEGMRDLI-RLTLQCMSSPGRRRPKMEIVMTELERIHEK 359
E D + RL QC + +RP + EL+ I ++
Sbjct: 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 140
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 8/191 (4%)
Query: 95 IGFGSFGPVYKGLLRD-TVVAIKR-RVGS-PRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G + T VA+K + G+ Q F+ E + ++H LV L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
++ EY+ GS+ + L + K+ + + + A+G+ ++ + +H++
Sbjct: 81 EPIYIITEYMAKGSLLDFLKS---DEGGKVLLPKLIDFSAQIAEGMAYIE--RKNYIHRD 135
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ ANVLV E+ + K+AD G+++++E+ E + PE G F+ SD++
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 272 SFGVFLLELVT 282
SFG+ L E+VT
Sbjct: 196 SFGILLYEIVT 206
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 19/233 (8%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVY----KGLLRD---TVVAIK--RRVGSPR 123
A + +E E A ++ + + +G GSFG VY KG+++D T VAIK S R
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 124 Q--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL--YETGLESST 179
+ EF+ E + + E ++V LLG Q +++ E + G + ++L +E++
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 180 KL---EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL 236
L + + +A A G+ +L++ K VH++ N +V E+F K+ D G+++ +
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 237 ENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ ++ V + PE + GVF+ SD++SFGV L E+ T E +
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 234
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 19/233 (8%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVY----KGLLRD---TVVAIK--RRVGSPR 123
A + +E E A ++ + + +G GSFG VY KG+++D T VAIK S R
Sbjct: 5 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 64
Query: 124 Q--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL--YETGLESST 179
+ EF+ E + + E ++V LLG Q +++ E + G + ++L +E++
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 180 KL---EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL 236
L + + +A A G+ +L++ K VH++ N +V E+F K+ D G+++ +
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 237 ENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ ++ V + PE + GVF+ SD++SFGV L E+ T E +
Sbjct: 183 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 235
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLRD-----TVVAIKRRVGSPRQ----EFVAEVTYLSEI-RHRN 140
+G G+FG V GL +D T VA+K + + ++E+ + I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 141 LVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY---ETGLESS--------TKLEFKQRVSI 189
++ LLG C Q+G ++ EY G++ +L GLE S +L K VS
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGP-SHGS 248
A A+G+ +L S K +H++ NVLV E+ + K+AD G+++ + +I+ ++G
Sbjct: 156 AYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGR 213
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + PE +++ SD++SFGV L E+ T
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 19/233 (8%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVY----KGLLRD---TVVAIK--RRVGSPR 123
A + +E E A ++ + + +G GSFG VY KG+++D T VAIK S R
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 124 Q--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL--YETGLESST 179
+ EF+ E + + E ++V LLG Q +++ E + G + ++L +E++
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 180 KL---EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL 236
L + + +A A G+ +L++ K VH++ N +V E+F K+ D G+++ +
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 237 ENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ ++ V + PE + GVF+ SD++SFGV L E+ T E +
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 234
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 115/226 (50%), Gaps = 19/226 (8%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVY----KGLLRD---TVVAIK--RRVGSPRQ--EFVA 128
+E E A ++ + + +G GSFG VY KG+++D T VAIK S R+ EF+
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL--YETGLESSTKL---EF 183
E + + E ++V LLG Q +++ E + G + ++L +E++ L
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
+ + +A A G+ +L++ K VH++ N +V E+F K+ D G+++ + +
Sbjct: 125 SKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 244 PSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
++ V + PE + GVF+ SD++SFGV L E+ T E +
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 19/233 (8%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVY----KGLLRD---TVVAIK--RRVGSPR 123
A + +E E A ++ + + +G GSFG VY KG+++D T VAIK S R
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 124 Q--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL--YETGLESST 179
+ EF+ E + + E ++V LLG Q +++ E + G + ++L +E++
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 180 KL---EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL 236
L + + +A A G+ +L++ K VH++ N +V E+F K+ D G+++ +
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 237 ENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ ++ V + PE + GVF+ SD++SFGV L E+ T E +
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 241
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 15/171 (8%)
Query: 125 EFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YE 172
+ V+E+ + I +H+N++ LLG C Q+G ++ Y G++ +L Y+
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
++ FK VS A+G+ +L S K +H++ NVLV EN + K+AD G+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGL 203
Query: 233 SKLLENIE-EAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ + NI+ ++G + + PE V++ SD++SFGV + E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 140
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 60/317 (18%)
Query: 70 GPQGARQFSMEELEQ-ATKQFSETSLIGFGSFGPVYKG-LLRD-TVVAIKRRVGSPR--- 123
G G +F L A + IG G FG V+KG L++D +VVAIK +
Sbjct: 1 GAMGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE 60
Query: 124 -------QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLE 176
QEF EV +S + H N+V L G N +M V E++P C LY L+
Sbjct: 61 TEMIEKFQEFQREVFIMSNLNHPNIVKLYG-LMHNPPRM-VMEFVP----CGDLYHRLLD 114
Query: 177 SSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVL---VDEN--FIAKVADTG 231
+ +++ ++ + L A G+ ++ + PP+VH++ ++ N+ +DEN AKVAD
Sbjct: 115 KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFS 174
Query: 232 ISK--------LLENIEEAGP-SHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+S+ LL N + P + G+ E ++E +D YSF + L ++T
Sbjct: 175 LSQQSVHSVSGLLGNFQWMAPETIGA-----------EEESYTEKADTYSFAMILYTILT 223
Query: 283 GQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEG---MRDLIRLTLQCMSSP 339
G+ S G + I +R + L T + +R++I L C S
Sbjct: 224 GEGPFDEYSYGKIK-FINMIR---------EEGLRPTIPEDCPPRLRNVIEL---CWSGD 270
Query: 340 GRRRPKMEIVMTELERI 356
++RP ++ EL +
Sbjct: 271 PKKRPHFSYIVKELSEL 287
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 137
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 198 WAFGVLLWEIAT 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 140
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 135
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLRD-----TVVAIKRRVGSPRQ----EFVAEVTYLSEI-RHRN 140
+G G+FG V GL +D T VA+K + + ++E+ + I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 141 LVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY---ETGLESS--------TKLEFKQRVSI 189
++ LLG C Q+G ++ EY G++ +L GLE S +L K VS
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE-EAGPSHGS 248
A A+G+ +L S K +H++ NVLV E+ + K+AD G+++ + +I+ ++G
Sbjct: 145 AYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 202
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + PE +++ SD++SFGV L E+ T
Sbjct: 203 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLRD-----TVVAIKRRVGSPRQ----EFVAEVTYLSEI-RHRN 140
+G G+FG V GL +D T VA+K + + ++E+ + I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 141 LVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY---ETGLESS--------TKLEFKQRVSI 189
++ LLG C Q+G ++ EY G++ +L GLE S +L K VS
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE-EAGPSHGS 248
A A+G+ +L S K +H++ NVLV E+ + K+AD G+++ + +I+ ++G
Sbjct: 148 AYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 205
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + PE +++ SD++SFGV L E+ T
Sbjct: 206 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLRD-----TVVAIKRRVGSPRQ----EFVAEVTYLSEI-RHRN 140
+G G+FG V GL +D T VA+K + + ++E+ + I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 141 LVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY---ETGLESS--------TKLEFKQRVSI 189
++ LLG C Q+G ++ EY G++ +L GLE S +L K VS
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE-EAGPSHGS 248
A A+G+ +L S K +H++ NVLV E+ + K+AD G+++ + +I+ ++G
Sbjct: 156 AYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + PE +++ SD++SFGV L E+ T
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 139
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 200 WAFGVLLWEIAT 211
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 125/279 (44%), Gaps = 39/279 (13%)
Query: 95 IGFGSFGPVYKGLLR--DTVVAIK--RRVGSP--RQEFVAEVTYLSEIRHRNLVTLLGYC 148
IG G+FG V+ G LR +T+VA+K R P + +F+ E L + H N+V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 149 QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLV 208
Q +V E + G L G +L K + + AA G+ +L S +
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLES--KCCI 235
Query: 209 HKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV---FRDPEVEESGVFS 265
H++ N LV E + K++D G+S+ E + + G + V + PE G +S
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 266 EMSDIYSFGVFLLELVTGQEASHIVSLGS--YEALIQWVRSRLSSNNFVDH--RLAGTFT 321
SD++SFG+ L E SLG+ Y L S + FV+ RL
Sbjct: 294 SESDVWSFGILLWE---------TFSLGASPYPNL-----SNQQTREFVEKGGRLP---C 336
Query: 322 TEGMRDLI-RLTLQCMSSPGRRRPKMEIVMTELERIHEK 359
E D + RL QC + +RP + EL+ I ++
Sbjct: 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLRD-----TVVAIKRRVGSPRQ----EFVAEVTYLSEI-RHRN 140
+G G+FG V GL +D T VA+K + + ++E+ + I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 141 LVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY---ETGLESS--------TKLEFKQRVSI 189
++ LLG C Q+G ++ EY G++ +L GLE S +L K VS
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE-EAGPSHGS 248
A A+G+ +L S K +H++ NVLV E+ + K+AD G+++ + +I+ ++G
Sbjct: 156 AYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + PE +++ SD++SFGV L E+ T
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQ 150
+G G +G VY+G+ + VA+K + +EF+ E + EI+H NLV LLG C +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
++ E++ G++ ++L E + + + +A + + +L K +H+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE--KKNFIHR 135
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KVAD G+S+L+ + + PE FS SD+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 271 YSFGVFLLELVT 282
++FGV L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLRD-----TVVAIKRRVGSPRQ----EFVAEVTYLSEI-RHRN 140
+G G+FG V GL +D T VA+K + + ++E+ + I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 141 LVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY---ETGLESS--------TKLEFKQRVSI 189
++ LLG C Q+G ++ EY G++ +L GLE S +L K VS
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE-EAGPSHGS 248
A A+G+ +L S K +H++ NVLV E+ + K+AD G+++ + +I+ ++G
Sbjct: 149 AYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 206
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + PE +++ SD++SFGV L E+ T
Sbjct: 207 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 14/227 (6%)
Query: 59 GPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLR---DTVVAI 115
GP + PS G + ++ K + +G G FG V G R D + +
Sbjct: 1 GPLGSKNAPSTAGLGYGSWEID-----PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKM 55
Query: 116 KRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL 175
+ EF+ E + + H LV L G C + ++ EY+ NG + N+L E
Sbjct: 56 IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-- 113
Query: 176 ESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKL 235
+ + +Q + + + + +L S + +H++ N LV++ + KV+D G+S+
Sbjct: 114 --RHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRY 169
Query: 236 LENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + EE + PEV FS SDI++FGV + E+ +
Sbjct: 170 VLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLRD-----TVVAIKRRVGSPRQ----EFVAEVTYLSEI-RHRN 140
+G G+FG V GL +D T VA+K + + ++E+ + I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 141 LVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YETGLESSTKLEFKQRVSI 189
++ LLG C Q+G ++ EY G++ +L Y +L K VS
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE-EAGPSHGS 248
A A+G+ +L S K +H++ NVLV E+ + K+AD G+++ + +I+ ++G
Sbjct: 141 AYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 198
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + PE +++ SD++SFGV L E+ T
Sbjct: 199 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLRD-----TVVAIKRRVGSPRQ----EFVAEVTYLSEI-RHRN 140
+G G+FG V GL +D T VA+K + + ++E+ + I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 141 LVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY---ETGLESS--------TKLEFKQRVSI 189
++ LLG C Q+G ++ EY G++ +L GLE S +L K VS
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE-EAGPSHGS 248
A A+G+ +L S K +H++ NVLV E+ + K+AD G+++ + +I+ ++G
Sbjct: 197 AYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 254
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + PE +++ SD++SFGV L E+ T
Sbjct: 255 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLRD-----TVVAIKRRVGSPRQ----EFVAEVTYLSEI-RHRN 140
+G G+FG V GL +D T VA+K + + ++E+ + I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 141 LVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----------YETGLESSTKLEFKQRVSI 189
++ LLG C Q+G ++ EY G++ +L Y +L K VS
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE-EAGPSHGS 248
A A+G+ +L S K +H++ NVLV E+ + K+AD G+++ + +I+ ++G
Sbjct: 156 AYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + PE +++ SD++SFGV L E+ T
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 116/233 (49%), Gaps = 19/233 (8%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVY----KGLLRD---TVVAIK--RRVGSPR 123
A + +E E A ++ + + +G GSFG VY KG+++D T VAIK S R
Sbjct: 1 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 60
Query: 124 Q--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL--YETGLESST 179
+ EF+ E + + E ++V LLG Q +++ E + G + ++L + ++
Sbjct: 61 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 180 KL---EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL 236
L + + +A A G+ +L++ K VH++ N +V E+F K+ D G+++ +
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 178
Query: 237 ENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ ++ V + PE + GVF+ SD++SFGV L E+ T E +
Sbjct: 179 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 231
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPVYKG-LLRDTVVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
IG G FG V+ G L VAIK R ++F+ E + ++ H LV L G C +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 152 GYQMLVFEYLPNGSMCNHLY-ETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
LVFE++ +G + ++L + GL ++ L + + L +G+ +L + ++H+
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLE--EASVIHR 127
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KV+D G+++ + + + + + PEV +S SD+
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 271 YSFGVFLLELVT 282
+SFGV + E+ +
Sbjct: 188 WSFGVLMWEVFS 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPVYKG-LLRDTVVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
IG G FG V+ G L VAIK R ++F+ E + ++ H LV L G C +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 152 GYQMLVFEYLPNGSMCNHLY-ETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
LVFE++ +G + ++L + GL ++ L + + L +G+ +L + ++H+
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLE--EACVIHR 130
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KV+D G+++ + + + + + PEV +S SD+
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 271 YSFGVFLLELVT 282
+SFGV + E+ +
Sbjct: 191 WSFGVLMWEVFS 202
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 116/233 (49%), Gaps = 19/233 (8%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVY----KGLLRD---TVVAIK--RRVGSPR 123
A + +E E A ++ + + +G GSFG VY KG+++D T VAIK S R
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 124 Q--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL--YETGLESST 179
+ EF+ E + + E ++V LLG Q +++ E + G + ++L + ++
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 180 KL---EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL 236
L + + +A A G+ +L++ K VH++ N +V E+F K+ D G+++ +
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 237 ENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ ++ V + PE + GVF+ SD++SFGV L E+ T E +
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 241
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 19/226 (8%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVY----KGLLRD---TVVAIK--RRVGSPRQ--EFVA 128
+E E A ++ + + +G GSFG VY KG+++D T VAIK S R+ EF+
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL--YETGLESSTKL---EF 183
E + + E ++V LLG Q +++ E + G + ++L +E++ L
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
+ + +A A G+ +L++ K VH++ N V E+F K+ D G+++ + +
Sbjct: 125 SKMIQMAGEIADGMAYLNANK--FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 244 PSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
++ V + PE + GVF+ SD++SFGV L E+ T E +
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 228
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPVYKG-LLRDTVVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
IG G FG V+ G L VAIK R ++F+ E + ++ H LV L G C +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 152 GYQMLVFEYLPNGSMCNHLY-ETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
LVFE++ +G + ++L + GL ++ L + + L +G+ +L + ++H+
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLE--EACVIHR 127
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KV+D G+++ + + + + + PEV +S SD+
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 271 YSFGVFLLELVT 282
+SFGV + E+ +
Sbjct: 188 WSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPVYKG-LLRDTVVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
IG G FG V+ G L VAIK R ++F+ E + ++ H LV L G C +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 152 GYQMLVFEYLPNGSMCNHLY-ETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
LVFE++ +G + ++L + GL ++ L + + L +G+ +L + ++H+
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLE--EACVIHR 125
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KV+D G+++ + + + + + PEV +S SD+
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 271 YSFGVFLLELVT 282
+SFGV + E+ +
Sbjct: 186 WSFGVLMWEVFS 197
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPVYKGLLR---DTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V G R D + + + EF+ E + + H LV L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
++ EY+ NG + N+L E + + +Q + + + + +L S + +H++
Sbjct: 77 RPIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRD 130
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDI 270
N LV++ + KV+D G+S+ + + +E S GS V + PEV FS SDI
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 271 YSFGVFLLELVT 282
++FGV + E+ +
Sbjct: 190 WAFGVLMWEIYS 201
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 84 QATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFVA-----EVTYLSEI 136
Q+ +++ L+G GS+G V K +DT +VAIK+ + S + V E+ L ++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCN-HLYETGLESSTKLEFKQRVSIALGAAK 195
RH NLV LL C++ LVFE++ + + + L+ GL+ Q+ +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQV----VQKYLFQIINGI 137
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G CH H+ ++H++ K N+LV ++ + K+ D G ++ L E + +R
Sbjct: 138 GFCHSHN----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWYRA 192
Query: 256 PEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
PE+ V + + D+++ G + E+ G+
Sbjct: 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 88 QFSETSL---IGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFVA-------EVTYLSEIR 137
F+E +L IG G FG VY+ VA+K P ++ E + ++
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK 64
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
H N++ L G C + LV E+ G + L S ++ V+ A+ A+G+
Sbjct: 65 HPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL------SGKRIPPDILVNWAVQIARGM 118
Query: 198 CHLHS-LKPPLVHKNFKTANVLVDE--------NFIAKVADTGISKLLENIEEAGPSHGS 248
+LH P++H++ K++N+L+ + N I K+ D G+++ + +
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAY 178
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
+ PEV + +FS+ SD++S+GV L EL+TG+
Sbjct: 179 ---AWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 59 GPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLR---DTVVAI 115
GP + PS G + ++ K + +G G FG V G R D + +
Sbjct: 1 GPLGSKNAPSTAGLGYGSWEID-----PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKM 55
Query: 116 KRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL 175
+ EF+ E + + H LV L G C + ++ EY+ NG + N+L E
Sbjct: 56 IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-- 113
Query: 176 ESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKL 235
+ + +Q + + + + +L S + +H++ N LV++ + KV+D G+S+
Sbjct: 114 --RHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRY 169
Query: 236 LENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + +E S GS V + PEV FS SDI++FGV + E+ +
Sbjct: 170 VLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLLR---DTV---VAIK--RRVGSPRQ--EFVAEVTYLSEIR 137
+ ++G G+FG VYKG+ +TV VAIK P+ EF+ E ++ +
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
H +LV LLG C Q LV + +P+G + +++E ++L V IA KG+
Sbjct: 99 HPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIA----KGM 153
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G+++LLE E+ + G + + +
Sbjct: 154 MYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 211
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E F+ SD++S+GV + EL+T
Sbjct: 212 ECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPVYKGLLR---DTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V G R D + + + EF+ E + + H LV L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
++ EY+ NG + N+L E + + +Q + + + + +L S + +H++
Sbjct: 76 RPIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRD 129
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDI 270
N LV++ + KV+D G+S+ + + +E S GS V + PEV FS SDI
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 188
Query: 271 YSFGVFLLELVT 282
++FGV + E+ +
Sbjct: 189 WAFGVLMWEIYS 200
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPVYKGLLR---DTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V G R D + + + EF+ E + + H LV L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
++ EY+ NG + N+L E + + +Q + + + + +L S + +H++
Sbjct: 83 RPIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRD 136
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDI 270
N LV++ + KV+D G+S+ + + +E S GS V + PEV FS SDI
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 195
Query: 271 YSFGVFLLELVT 282
++FGV + E+ +
Sbjct: 196 WAFGVLMWEIYS 207
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 97/191 (50%), Gaps = 8/191 (4%)
Query: 95 IGFGSFGPVYKGLLRD-TVVAIKR-RVGS-PRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ G + T VA+K + G+ Q F+ E + ++H LV L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
++ E++ GS+ + L + K+ + + + A+G+ ++ + +H++
Sbjct: 80 EPIYIITEFMAKGSLLDFLKS---DEGGKVLLPKLIDFSAQIAEGMAYIE--RKNYIHRD 134
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ ANVLV E+ + K+AD G+++++E+ E + PE G F+ S+++
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 272 SFGVFLLELVT 282
SFG+ L E+VT
Sbjct: 195 SFGILLYEIVT 205
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLLR---DTV---VAIK--RRVGSPRQ--EFVAEVTYLSEIR 137
+ ++G G+FG VYKG+ +TV VAIK P+ EF+ E ++ +
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
H +LV LLG C Q LV + +P+G + +++E ++L V IA KG+
Sbjct: 76 HPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIA----KGM 130
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G+++LLE E+ + G + + +
Sbjct: 131 MYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E F+ SD++S+GV + EL+T
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPVYKGLLR---DTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V G R D + + + EF+ E + + H LV L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
++ EY+ NG + N+L E + + +Q + + + + +L S + +H++
Sbjct: 77 RPIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRD 130
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDI 270
N LV++ + KV+D G+S+ + + +E S GS V + PEV FS SDI
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 271 YSFGVFLLELVT 282
++FGV + E+ +
Sbjct: 190 WAFGVLMWEIYS 201
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPVYKG--LLRDTVVAIKRRVGS-PRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
IG G FG V+ G L +D V + GS +F+ E + ++ H LV L G C +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 152 GYQMLVFEYLPNGSMCNHLY-ETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
LVFE++ +G + ++L + GL ++ L + + L +G+ +L + ++H+
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLE--EACVIHR 147
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KV+D G+++ + + + + + PEV +S SD+
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 271 YSFGVFLLELVT 282
+SFGV + E+ +
Sbjct: 208 WSFGVLMWEVFS 219
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPVYKGLLR---DTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V G R D + + + EF+ E + + H LV L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
++ EY+ NG + N+L E + + +Q + + + + +L S + +H++
Sbjct: 72 RPIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRD 125
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDI 270
N LV++ + KV+D G+S+ + + +E S GS V + PEV FS SDI
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 184
Query: 271 YSFGVFLLELVT 282
++FGV + E+ +
Sbjct: 185 WAFGVLMWEIYS 196
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 94 LIGFGSFGPVYKGLLRDT--------VVAIKR--RVGSPRQEFVAEVTYLSEIRHRNLVT 143
+IG G FG VY G L D V ++ R +G Q F+ E + + H N+++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVLS 94
Query: 144 LLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
LLG C + G ++V Y+ +G + N + + K + L AKG+ +L S
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKGMKYLAS 150
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVNV-FRDPEVE 259
K VH++ N ++DE F KVAD G+++ + + E + G+ + V + E
Sbjct: 151 KK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 260 ESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGT 319
++ F+ SD++SFGV L EL+T + A + +++ + ++ R RL
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR---------RL--- 255
Query: 320 FTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
E D L + L+C RP +++ + I +TF+GE
Sbjct: 256 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 300
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 95 IGFGSFGPVYKG-LLRDTVVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
IG G FG V+ G L VAIK R ++F+ E + ++ H LV L G C +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 152 GYQMLVFEYLPNGSMCNHLY-ETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
LV E++ +G + ++L + GL ++ L + + L +G+ +L + ++H+
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLE--EACVIHR 128
Query: 211 NFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDI 270
+ N LV EN + KV+D G+++ + + + + + PEV +S SD+
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 271 YSFGVFLLELVT 282
+SFGV + E+ +
Sbjct: 189 WSFGVLMWEVFS 200
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDTV----VAIKRRVGSPRQE------FVAEVTYLSEIRHRNLVTL 144
+G G VY L DT+ VAIK PR++ F EV S++ H+N+V++
Sbjct: 19 LGGGGMSTVY--LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETG-LESSTKLEFKQRVSIALGAAKGLCHLHSL 203
+ +++ LV EY+ ++ ++ G L T + F ++ G+ H H +
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQI------LDGIKHAHDM 130
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGV 263
+ +VH++ K N+L+D N K+ D GI+K L +H + PE +
Sbjct: 131 R--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA 188
Query: 264 FSEMSDIYSFGVFLLELVTGQ 284
E +DIYS G+ L E++ G+
Sbjct: 189 TDECTDIYSIGIVLYEMLVGE 209
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 94 LIGFGSFGPVYKGLLRDT--------VVAIKR--RVGSPRQEFVAEVTYLSEIRHRNLVT 143
+IG G FG VY G L D V ++ R +G Q F+ E + + H N+++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVLS 95
Query: 144 LLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
LLG C + G ++V Y+ +G + N + + K + L AKG+ +L S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKGMKYLAS 151
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVNV-FRDPEVE 259
K VH++ N ++DE F KVAD G+++ + + E + G+ + V + E
Sbjct: 152 KK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 260 ESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGT 319
++ F+ SD++SFGV L EL+T + A + +++ + ++ R RL
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR---------RL--- 256
Query: 320 FTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
E D L + L+C RP +++ + I +TF+GE
Sbjct: 257 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 301
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 94 LIGFGSFGPVYKGLLRD--------TVVAIKR--RVGSPRQEFVAEVTYLSEIRHRNLVT 143
+IG G FG VY G L D V ++ R +G Q F+ E + + H N+++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVLS 90
Query: 144 LLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
LLG C + G ++V Y+ +G + N + + K + L AKG+ +L S
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKGMKYLAS 146
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVNV-FRDPEVE 259
K VH++ N ++DE F KVAD G+++ + + E + G+ + V + E
Sbjct: 147 KK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 260 ESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGT 319
++ F+ SD++SFGV L EL+T + A + +++ + ++ R RL
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR---------RL--- 251
Query: 320 FTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
E D L + L+C RP +++ + I +TF+GE
Sbjct: 252 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 296
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 94 LIGFGSFGPVYKGLLRD--------TVVAIKR--RVGSPRQEFVAEVTYLSEIRHRNLVT 143
+IG G FG VY G L D V ++ R +G Q F+ E + + H N+++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVLS 93
Query: 144 LLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
LLG C + G ++V Y+ +G + N + + K + L AKG+ +L S
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKGMKYLAS 149
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVNV-FRDPEVE 259
K VH++ N ++DE F KVAD G+++ + + E + G+ + V + E
Sbjct: 150 KK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 260 ESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGT 319
++ F+ SD++SFGV L EL+T + A + +++ + ++ R RL
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR---------RL--- 254
Query: 320 FTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
E D L + L+C RP +++ + I +TF+GE
Sbjct: 255 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 299
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 94 LIGFGSFGPVYKGLLRDT--------VVAIKR--RVGSPRQEFVAEVTYLSEIRHRNLVT 143
+IG G FG VY G L D V ++ R +G Q F+ E + + H N+++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVLS 94
Query: 144 LLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
LLG C + G ++V Y+ +G + N + + K + L AKG+ +L S
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKGMKYLAS 150
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVNV-FRDPEVE 259
K VH++ N ++DE F KVAD G+++ + + E + G+ + V + E
Sbjct: 151 KK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 260 ESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGT 319
++ F+ SD++SFGV L EL+T + A + +++ + ++ R RL
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR---------RL--- 255
Query: 320 FTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
E D L + L+C RP +++ + I +TF+GE
Sbjct: 256 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 300
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 94 LIGFGSFGPVYKGLLRDT--------VVAIKR--RVGSPRQEFVAEVTYLSEIRHRNLVT 143
+IG G FG VY G L D V ++ R +G Q F+ E + + H N+++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVLS 95
Query: 144 LLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
LLG C + G ++V Y+ +G + N + + K + L AKG+ +L S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKGMKYLAS 151
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVNV-FRDPEVE 259
K VH++ N ++DE F KVAD G+++ + + E + G+ + V + E
Sbjct: 152 KK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 260 ESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGT 319
++ F+ SD++SFGV L EL+T + A + +++ + ++ R RL
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR---------RL--- 256
Query: 320 FTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
E D L + L+C RP +++ + I +TF+GE
Sbjct: 257 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 301
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEI--RHRNLVTL 144
KQ IG G +G V+ G R VA+K + + E + RH N+
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENI--- 93
Query: 145 LGYCQQN-------GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
LG+ + L+ +Y NGS+ ++L ST L+ K + +A + GL
Sbjct: 94 LGFIAADIKGTGSWTQLYLITDYHENGSLYDYL------KSTTLDAKSMLKLAYSSVSGL 147
Query: 198 CHLHSL------KPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSHGSIV 250
CHLH+ KP + H++ K+ N+LV +N +AD G++ K + + E + V
Sbjct: 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV 207
Query: 251 NVFR--DPEVEESGVFSE------MSDIYSFGVFLLEL 280
R PEV + + M+D+YSFG+ L E+
Sbjct: 208 GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 134/326 (41%), Gaps = 50/326 (15%)
Query: 70 GPQGARQFSMEELEQATKQFSETSLI-----GFGSFGPV-------YKGLLRDTVVAIK- 116
GP + + LE +F +L+ G G FG V KG T VA+K
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 117 -RRVGSPRQ--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYET 173
+ SP + + ++E L ++ H +++ L G C Q+G +L+ EY GS+ L E+
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
Query: 174 -------------------GLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKT 214
L +S A ++G+ +L +K LVH++
Sbjct: 121 RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAA 178
Query: 215 ANVLVDENFIAKVADTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSF 273
N+LV E K++D G+S+ + E S G I + E +++ SD++SF
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 274 GVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTL 333
GV L E+VT + Y + RL + HR+ ++ RL L
Sbjct: 239 GVLLWEIVT-------LGGNPYPGIPP---ERLFNLLKTGHRMERPDNCS--EEMYRLML 286
Query: 334 QCMSSPGRRRPKMEIVMTELERIHEK 359
QC +RP + +LE++ K
Sbjct: 287 QCWKQEPDKRPVFADISKDLEKMMVK 312
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 66
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSI 189
++H N+V G C G + L+ EYLP GS+ ++L ++ ++ L++ ++
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI-- 124
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE----AGPS 245
KG+ +L + + +H+N T N+LV+ K+ D G++K+L +E P
Sbjct: 125 ----CKGMEYLGTKR--YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG 178
Query: 246 HGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 179 ESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 218
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 94 LIGFGSFGPVYKGLLRD--------TVVAIKR--RVGSPRQEFVAEVTYLSEIRHRNLVT 143
+IG G FG VY G L D V ++ R +G Q F+ E + + H N+++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVLS 92
Query: 144 LLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
LLG C + G ++V Y+ +G + N + + K + L AKG+ +L S
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKGMKYLAS 148
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVNV-FRDPEVE 259
K VH++ N ++DE F KVAD G+++ + + E + G+ + V + E
Sbjct: 149 KK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 260 ESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGT 319
++ F+ SD++SFGV L EL+T + A + +++ + ++ R RL
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR---------RL--- 253
Query: 320 FTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
E D L + L+C RP +++ + I +TF+GE
Sbjct: 254 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 298
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 77 FSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTV-------VAIKRRVGSP----RQE 125
F +E E + ++ + +G GSFG VY+G RD + VA+K S R E
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL---- 181
F+ E + + ++V LLG + ++V E + +G + ++L E+
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 182 -EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE 240
++ + +A A G+ +L++ K VH++ N +V +F K+ D G+++ + +
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 181
Query: 241 EAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
++ V + PE + GVF+ SD++SFGV L E+ + E +
Sbjct: 182 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT--------VVAIKR--RVGSPRQEFVAEVTYLSEIR 137
F+E +IG G FG VY G L D V ++ R +G Q F+ E + +
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFS 90
Query: 138 HRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+++LLG C + G ++V Y+ +G + N + + K + L AKG
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKG 146
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISK--LLENIEEAGPSHGSIVNV-F 253
+ L S K VH++ N ++DE F KVAD G+++ L + + G+ + V +
Sbjct: 147 MKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVD 313
E ++ F+ SD++SFGV L EL+T + A + +++ + ++ R
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR-------- 255
Query: 314 HRLAGTFTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
RL E D L + L+C RP +++ + I +TF+GE
Sbjct: 256 -RL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 302
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 94 LIGFGSFGPVYKGLLRD--------TVVAIKR--RVGSPRQEFVAEVTYLSEIRHRNLVT 143
+IG G FG VY G L D V ++ R +G Q F+ E + + H N+++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVLS 113
Query: 144 LLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
LLG C + G ++V Y+ +G + N + + K + L AKG+ +L S
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKGMKYLAS 169
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVNV-FRDPEVE 259
K VH++ N ++DE F KVAD G+++ + + E + G+ + V + E
Sbjct: 170 KK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 260 ESGVFSEMSDIYSFGVFLLELVT 282
++ F+ SD++SFGV L EL+T
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMT 250
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 23/209 (11%)
Query: 95 IGFGSFGPVY----KGLLRD------TVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTL 144
+G G+FG V+ LL + V A+K S RQ+F E L+ ++H+++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESST----------KLEFKQRVSIALGAA 194
G C + ++VFEY+ +G + L G ++ L Q +++A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-F 253
G+ +L L VH++ T N LV + + K+ D G+S+ + + + +++ + +
Sbjct: 169 AGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 226
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVT 282
PE F+ SD++SFGV L E+ T
Sbjct: 227 MPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 94 LIGFGSFGPVYKGLLRD--------TVVAIKR--RVGSPRQEFVAEVTYLSEIRHRNLVT 143
+IG G FG VY G L D V ++ R +G Q F+ E + + H N+++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVLS 87
Query: 144 LLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
LLG C + G ++V Y+ +G + N + + K + L AKG+ +L S
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKGMKYLAS 143
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVNV-FRDPEVE 259
K VH++ N ++DE F KVAD G+++ + + E + G+ + V + E
Sbjct: 144 KK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 260 ESGVFSEMSDIYSFGVFLLELVT 282
++ F+ SD++SFGV L EL+T
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMT 224
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRD--------TVVAIKR--RVGSPRQEFVAEVTYLSEIR 137
F+E +IG G FG VY G L D V ++ R +G Q F+ E + +
Sbjct: 52 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFS 108
Query: 138 HRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+++LLG C + G ++V Y+ +G + N + + K + L AKG
Sbjct: 109 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKG 164
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH--GSIVNV-F 253
+ +L S K VH++ N ++DE F KVAD G+++ + + E + G+ + V +
Sbjct: 165 MKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVT 282
E ++ F+ SD++SFGV L EL+T
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRD--------TVVAIKR--RVGSPRQEFVAEVTYLSEIR 137
F+E +IG G FG VY G L D V ++ R +G Q F+ E + +
Sbjct: 92 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFS 148
Query: 138 HRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+++LLG C + G ++V Y+ +G + N + + K + L AKG
Sbjct: 149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKG 204
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL--ENIEEAGPSHGSIVNV-F 253
+ L S K VH++ N ++DE F KVAD G+++ + + + G+ + V +
Sbjct: 205 MKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVD 313
E ++ F+ SD++SFGV L EL+T + A + +++ + ++ R
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR-------- 313
Query: 314 HRLAGTFTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
RL E D L + L+C RP +++ + I +TF+GE
Sbjct: 314 -RL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 360
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 23/209 (11%)
Query: 95 IGFGSFGPVY----KGLLRD------TVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTL 144
+G G+FG V+ LL + V A+K S RQ+F E L+ ++H+++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESST----------KLEFKQRVSIALGAA 194
G C + ++VFEY+ +G + L G ++ L Q +++A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-F 253
G+ +L L VH++ T N LV + + K+ D G+S+ + + + +++ + +
Sbjct: 140 AGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 197
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVT 282
PE F+ SD++SFGV L E+ T
Sbjct: 198 MPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 134/326 (41%), Gaps = 50/326 (15%)
Query: 70 GPQGARQFSMEELEQATKQFSETSLI-----GFGSFGPV-------YKGLLRDTVVAIK- 116
GP + + LE +F +L+ G G FG V KG T VA+K
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 117 -RRVGSPRQ--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYET 173
+ SP + + ++E L ++ H +++ L G C Q+G +L+ EY GS+ L E+
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
Query: 174 -------------------GLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKT 214
L +S A ++G+ +L +K LVH++
Sbjct: 121 RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAA 178
Query: 215 ANVLVDENFIAKVADTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSF 273
N+LV E K++D G+S+ + E S G I + E +++ SD++SF
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 274 GVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTL 333
GV L E+VT + Y + RL + HR+ ++ RL L
Sbjct: 239 GVLLWEIVT-------LGGNPYPGIPP---ERLFNLLKTGHRMERPDNCS--EEMYRLML 286
Query: 334 QCMSSPGRRRPKMEIVMTELERIHEK 359
QC +RP + +LE++ K
Sbjct: 287 QCWKQEPDKRPVFADISKDLEKMMVK 312
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 77 FSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTV-------VAIKRRVGSP----RQE 125
F +E E + ++ + +G GSFG VY+G RD + VA+K S R E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL---- 181
F+ E + + ++V LLG + ++V E + +G + ++L E+
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 182 -EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE 240
++ + +A A G+ +L++ K VH++ N +V +F K+ D G+++ + +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Query: 241 EAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
++ V + PE + GVF+ SD++SFGV L E+ + E +
Sbjct: 185 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLL-RDTVVAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ + T VA+K + GS E F+AE + ++H LV L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 255
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
++ E++ GS+ + L + +K + + + A+G+ + +H++
Sbjct: 256 PIYIIT-EFMAKGSLLDFLKS---DEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRD 309
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV + + K+AD G+++++E+ E + PE G F+ SD++
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 272 SFGVFLLELVT 282
SFG+ L+E+VT
Sbjct: 370 SFGILLMEIVT 380
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 23/209 (11%)
Query: 95 IGFGSFGPVY----KGLLRD------TVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTL 144
+G G+FG V+ LL + V A+K S RQ+F E L+ ++H+++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESST----------KLEFKQRVSIALGAA 194
G C + ++VFEY+ +G + L G ++ L Q +++A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-F 253
G+ +L L VH++ T N LV + + K+ D G+S+ + + + +++ + +
Sbjct: 146 AGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 203
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVT 282
PE F+ SD++SFGV L E+ T
Sbjct: 204 MPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 95 IGFGSFGPVYKGLL-RDTVVAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ + T VA+K + GS E F+AE + ++H LV L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 82
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
++ E++ GS+ + L + +K + + + A+G+ + +H++
Sbjct: 83 PIYIIT-EFMAKGSLLDFLKS---DEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRD 136
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIY 271
+ AN+LV + + K+AD G+++++E+ E + PE G F+ SD++
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 272 SFGVFLLELVT 282
SFG+ L+E+VT
Sbjct: 197 SFGILLMEIVT 207
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT--------VVAIKR--RVGSPRQEFVAEVTYLSEIR 137
F+E +IG G FG VY G L D V ++ R +G Q F+ E + +
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFS 89
Query: 138 HRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+++LLG C + G ++V Y+ +G + N + + K + L AKG
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKG 145
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL--ENIEEAGPSHGSIVNV-F 253
+ L S K VH++ N ++DE F KVAD G+++ + + + G+ + V +
Sbjct: 146 MKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVD 313
E ++ F+ SD++SFGV L EL+T + A + +++ + ++ R
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR-------- 254
Query: 314 HRLAGTFTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
RL E D L + L+C RP +++ + I +TF+GE
Sbjct: 255 -RL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 301
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 34/238 (14%)
Query: 72 QGARQFSMEELEQATKQFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVG 120
QGA + E+ + QF E L +G G+FG V Y L +T VVA+K+
Sbjct: 23 QGAMGSAFEDRDPT--QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH 80
Query: 121 SPRQ---EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YET 173
S + +F E+ L ++H N+V G C G + L+ EYLP GS+ ++L ++
Sbjct: 81 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE 140
Query: 174 GLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS 233
++ L++ ++ KG+ +L + + +H++ T N+LV+ K+ D G++
Sbjct: 141 RIDHIKLLQYTSQI------CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLT 192
Query: 234 KLLENIEEAG----PSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
K+L +E P I + PE FS SD++SFGV L EL T E S
Sbjct: 193 KVLPQDKEXXKVKEPGESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 248
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT--------VVAIKR--RVGSPRQEFVAEVTYLSEIR 137
F+E +IG G FG VY G L D V ++ R +G Q F+ E + +
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFS 89
Query: 138 HRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+++LLG C + G ++V Y+ +G + N + + K + L AKG
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKG 145
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL--ENIEEAGPSHGSIVNV-F 253
+ L S K VH++ N ++DE F KVAD G+++ + + + G+ + V +
Sbjct: 146 MKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVD 313
E ++ F+ SD++SFGV L EL+T + A + +++ + ++ R
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR-------- 254
Query: 314 HRLAGTFTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
RL E D L + L+C RP +++ + I +TF+GE
Sbjct: 255 -RL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 301
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT--------VVAIKR--RVGSPRQEFVAEVTYLSEIR 137
F+E +IG G FG VY G L D V ++ R +G Q F+ E + +
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFS 90
Query: 138 HRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+++LLG C + G ++V Y+ +G + N + + K + L AKG
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKG 146
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL--ENIEEAGPSHGSIVNV-F 253
+ L S K VH++ N ++DE F KVAD G+++ + + + G+ + V +
Sbjct: 147 MKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVD 313
E ++ F+ SD++SFGV L EL+T + A + +++ + ++ R
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR-------- 255
Query: 314 HRLAGTFTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
RL E D L + L+C RP +++ + I +TF+GE
Sbjct: 256 -RL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 302
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT--------VVAIKR--RVGSPRQEFVAEVTYLSEIR 137
F+E +IG G FG VY G L D V ++ R +G Q F+ E + +
Sbjct: 38 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFS 94
Query: 138 HRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+++LLG C + G ++V Y+ +G + N + + K + L AKG
Sbjct: 95 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKG 150
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN--IEEAGPSHGSIVNV-F 253
+ L S K VH++ N ++DE F KVAD G+++ + + + G+ + V +
Sbjct: 151 MKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVD 313
E ++ F+ SD++SFGV L EL+T + A + +++ + ++ R
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR-------- 259
Query: 314 HRLAGTFTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
RL E D L + L+C RP +++ + I +TF+GE
Sbjct: 260 -RL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 306
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT--------VVAIKR--RVGSPRQEFVAEVTYLSEIR 137
F+E +IG G FG VY G L D V ++ R +G Q F+ E + +
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFS 87
Query: 138 HRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+++LLG C + G ++V Y+ +G + N + + K + L AKG
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK----DLIGFGLQVAKG 143
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN--IEEAGPSHGSIVNV-F 253
+ L S K VH++ N ++DE F KVAD G+++ + + + G+ + V +
Sbjct: 144 MKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVD 313
E ++ F+ SD++SFGV L EL+T + A + +++ + ++ R
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGR-------- 252
Query: 314 HRLAGTFTTEGMRD-LIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTTFMGE 369
RL E D L + L+C RP +++ + I +TF+GE
Sbjct: 253 -RL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI------FSTFIGE 299
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 13 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 72
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSI 189
++H N+V G C G + L+ EYLP GS+ ++L ++ ++ L++ ++
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI-- 130
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG----PS 245
KG+ +L + + +H++ T N+LV+ K+ D G++K+L +E P
Sbjct: 131 ----CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 184
Query: 246 HGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 185 ESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 224
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 64
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSI 189
++H N+V G C G + L+ EYLP GS+ ++L ++ ++ L++ ++
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI-- 122
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG----PS 245
KG+ +L + + +H++ T N+LV+ K+ D G++K+L +E P
Sbjct: 123 ----CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 176
Query: 246 HGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 177 ESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 216
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 28/220 (12%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIAL 191
++H N+V G C G + L+ EYLP GS+ ++L + E ++ Q S
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTS--- 124
Query: 192 GAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG----PSHG 247
KG+ +L + + +H++ T N+LV+ K+ D G++K+L +E P
Sbjct: 125 QICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 248 SIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 183 PI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 220
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 69
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSI 189
++H N+V G C G + L+ EYLP GS+ ++L ++ ++ L++ ++
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI-- 127
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG----PS 245
KG+ +L + + +H++ T N+LV+ K+ D G++K+L +E P
Sbjct: 128 ----CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
Query: 246 HGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 182 ESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 221
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSI 189
++H N+V G C G + L+ EYLP GS+ ++L ++ ++ L++ ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI-- 123
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG----PS 245
KG+ +L + + +H++ T N+LV+ K+ D G++K+L +E P
Sbjct: 124 ----CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 246 HGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 178 ESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 63
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSI 189
++H N+V G C G + L+ EYLP GS+ ++L ++ ++ L++ ++
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI-- 121
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG----PS 245
KG+ +L + + +H++ T N+LV+ K+ D G++K+L +E P
Sbjct: 122 ----CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 175
Query: 246 HGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 176 ESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 116/234 (49%), Gaps = 31/234 (13%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ 124
P+G+ +M + E+ +F + +G G+FG V Y L +T VVA+K+ S +
Sbjct: 16 PRGSH--NMTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 71
Query: 125 ---EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLES 177
+F E+ L ++H N+V G C G + L+ EYLP GS+ ++L ++ ++
Sbjct: 72 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 131
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
L++ ++ KG+ +L + + +H++ T N+LV+ K+ D G++K+L
Sbjct: 132 IKLLQYTSQI------CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLP 183
Query: 238 NIEEAG----PSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
+E P I + PE FS SD++SFGV L EL T E S
Sbjct: 184 QDKEXXKVKEPGESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 235
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 11 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 70
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSI 189
++H N+V G C G + L+ EYLP GS+ ++L ++ ++ L++ ++
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI-- 128
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG----PS 245
KG+ +L + + +H++ T N+LV+ K+ D G++K+L +E P
Sbjct: 129 ----CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
Query: 246 HGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 183 ESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 222
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSI 189
++H N+V G C G + L+ EYLP GS+ ++L ++ ++ L++ ++
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI-- 126
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG----PS 245
KG+ +L + + +H++ T N+LV+ K+ D G++K+L +E P
Sbjct: 127 ----CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 246 HGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 181 ESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 220
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSI 189
++H N+V G C G + L+ EYLP GS+ ++L ++ ++ L++ ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI-- 123
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG----PS 245
KG+ +L + + +H++ T N+LV+ K+ D G++K+L +E P
Sbjct: 124 ----CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 246 HGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 178 ESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 116/234 (49%), Gaps = 31/234 (13%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ 124
P+G+ +M + E+ +F + +G G+FG V Y L +T VVA+K+ S +
Sbjct: 16 PRGSH--NMTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 71
Query: 125 ---EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLES 177
+F E+ L ++H N+V G C G + L+ EYLP GS+ ++L ++ ++
Sbjct: 72 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 131
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
L++ ++ KG+ +L + + +H++ T N+LV+ K+ D G++K+L
Sbjct: 132 IKLLQYTSQI------CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLP 183
Query: 238 NIEEAG----PSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
+E P I + PE FS SD++SFGV L EL T E S
Sbjct: 184 QDKEXXKVKEPGESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 235
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 19/226 (8%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVYKGLLRDTV-------VAIKRRVGSP----RQEFVA 128
+E E + ++ + +G GSFG VY+G RD + VA+K S R EF+
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 70
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL-----EF 183
E + + ++V LLG + ++V E + +G + ++L E+
Sbjct: 71 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 130
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
++ + +A A G+ +L++ K VH+N N +V +F K+ D G+++ + +
Sbjct: 131 QEMIQMAAEIADGMAYLNAKK--FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 188
Query: 244 PSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
++ V + PE + GVF+ SD++SFGV L E+ + E +
Sbjct: 189 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 234
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 12 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 71
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSI 189
++H N+V G C G + L+ EYLP GS+ ++L ++ ++ L++ ++
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI-- 129
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG----PS 245
KG+ +L + + +H++ T N+LV+ K+ D G++K+L +E P
Sbjct: 130 ----CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 183
Query: 246 HGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 184 ESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 223
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 19/226 (8%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVYKGLLRDTV-------VAIKRRVGSP----RQEFVA 128
+E E + ++ + +G GSFG VY+G RD + VA+K S R EF+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL-----EF 183
E + + ++V LLG + ++V E + +G + ++L E+
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
++ + +A A G+ +L++ K VH++ N +V +F K+ D G+++ + +
Sbjct: 130 QEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 244 PSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
++ V + PE + GVF+ SD++SFGV L E+ + E +
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 19/226 (8%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVYKGLLRDTV-------VAIKRRVGSP----RQEFVA 128
+E E + ++ + +G GSFG VY+G RD + VA+K S R EF+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL-----EF 183
E + + ++V LLG + ++V E + +G + ++L E+
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
++ + +A A G+ +L++ K VH+N N +V +F K+ D G+++ + +
Sbjct: 130 QEMIQMAAEIADGMAYLNAKK--FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 187
Query: 244 PSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
++ V + PE + GVF+ SD++SFGV L E+ + E +
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSI 189
++H N+V G C G + L+ EYLP GS+ ++L ++ ++ L++ ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI-- 123
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE----AGPS 245
KG+ +L + + +H++ T N+LV+ K+ D G++K+L +E P
Sbjct: 124 ----CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG 177
Query: 246 HGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 178 ESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 77 FSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTV-------VAIKRRVGSP----RQE 125
F +E E + ++ + +G GSFG VY+G RD + VA+K S R E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL---- 181
F+ E + + ++V LLG + ++V E + +G + ++L E+
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 182 -EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISK-LLENI 239
++ + +A A G+ +L++ K VH++ N +V +F K+ D G+++ + E
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETA 184
Query: 240 EEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
G + + PE + GVF+ SD++SFGV L E+ + E +
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 50/326 (15%)
Query: 70 GPQGARQFSMEELEQATKQFSETSLI-----GFGSFGPV-------YKGLLRDTVVAIK- 116
GP + + LE +F +L+ G G FG V KG T VA+K
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 117 -RRVGSPRQ--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYET 173
+ SP + + ++E L ++ H +++ L G C Q+G +L+ EY GS+ L E+
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
Query: 174 -------------------GLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKT 214
L +S A ++G+ +L + LVH++
Sbjct: 121 RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAA 178
Query: 215 ANVLVDENFIAKVADTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSF 273
N+LV E K++D G+S+ + E S G I + E +++ SD++SF
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 274 GVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTL 333
GV L E+VT + Y + RL + HR+ ++ RL L
Sbjct: 239 GVLLWEIVT-------LGGNPYPGIPP---ERLFNLLKTGHRMERPDNCS--EEMYRLML 286
Query: 334 QCMSSPGRRRPKMEIVMTELERIHEK 359
QC +RP + +LE++ K
Sbjct: 287 QCWKQEPDKRPVFADISKDLEKMMVK 312
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 77 FSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTV-------VAIKRRVGSP----RQE 125
F +E E + ++ + +G GSFG VY+G RD + VA+K S R E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL---- 181
F+ E + + ++V LLG + ++V E + +G + ++L E+
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 182 -EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE 240
++ + +A A G+ +L++ K VH++ N +V +F K+ D G+++ + +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 241 EAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
++ V + PE + GVF+ SD++SFGV L E+ + E +
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 25/271 (9%)
Query: 95 IGFGSFGPVYKGLLR---DTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V G + D V + + EF E + ++ H LV G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 152 GYQMLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+V EY+ NG + N+L + GLE S LE + +G+ L S + +H
Sbjct: 76 YPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLE------MCYDVCEGMAFLESHQ--FIH 127
Query: 210 KNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSD 269
++ N LVD + KV+D G+++ + + + + PEV +S SD
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 270 IYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLI 329
+++FG+ + E + SLG + + S + HRL +
Sbjct: 188 VWAFGILMWE---------VFSLGKMPYDL-YTNSEVVLKVSQGHRLYRPHLASDT--IY 235
Query: 330 RLTLQCMSSPGRRRPKMEIVMTELERIHEKE 360
++ C +RP + +++ +E + EK+
Sbjct: 236 QIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 24/210 (11%)
Query: 95 IGFGSFGPVY----------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTL 144
+G G+FG V+ K + V A+K + R++F E L+ ++H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETG-----------LESSTKLEFKQRVSIALGA 193
G C ++VFEY+ +G + L G ++ +L Q + IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV- 252
A G+ +L S VH++ T N LV N + K+ D G+S+ + + + +++ +
Sbjct: 143 ASGMVYLASQH--FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ PE F+ SD++SFGV L E+ T
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 79 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 133
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 134 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 132
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 133 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 134
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 135 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 131
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 132 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 76 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 130
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 131 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA----KGM 131
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 132 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 95 IGFGSFGPVY----------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTL 144
+G G+FG V+ + + V +K + R++F E L+ ++H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES--------STKLEFKQRVSIALGAAKG 196
G C + ++VFEY+ +G + L G ++ T+L Q + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRD 255
+ +L S VH++ T N LV EN + K+ D G+S+ + + + +++ + +
Sbjct: 141 MVYLASQH--FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP 198
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVT 282
PE F+ SD++S GV L E+ T
Sbjct: 199 PESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 32/222 (14%)
Query: 88 QFSETSL-----IGFGSFGPV----YKGLLRDT--VVAIKRRVGSPRQ---EFVAEVTYL 133
QF E L +G G+FG V Y L +T VVA+K+ S + +F E+ L
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 134 SEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSI 189
++H N+V G C G + L+ E+LP GS+ +L ++ ++ L++ ++
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI-- 126
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG----PS 245
KG+ +L + + +H++ T N+LV+ K+ D G++K+L +E P
Sbjct: 127 ----CKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 246 HGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEAS 287
I + PE FS SD++SFGV L EL T E S
Sbjct: 181 ESPI--FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 220
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKRRVGSP----RQEFVAEVTYLSEIRHRNLVT 143
+G GSFG VY+G RD + VA+K S R EF+ E + + ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL-----EFKQRVSIALGAAKGLC 198
LLG + ++V E + +G + ++L E+ ++ + +A A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+L++ K VH++ N +V +F K+ D G+++ + + ++ V + PE
Sbjct: 144 YLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 201
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ GVF+ SD++SFGV L E+ + E +
Sbjct: 202 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 232
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 125 EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHLYETGLESSTKLE 182
+ E+ L + H N+V G C ++G L+ E+LP+GS+ +L ++ K+
Sbjct: 69 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKIN 124
Query: 183 FKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA 242
KQ++ A+ KG+ +L S + VH++ NVLV+ K+ D G++K +E +E
Sbjct: 125 LKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX 182
Query: 243 GPSHGSIVNVFRD-------PEVEESGVFSEMSDIYSFGVFLLELVT 282
V RD PE F SD++SFGV L EL+T
Sbjct: 183 -----XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 130
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 131 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 82 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 136
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 137 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 194
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 195 ESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 137
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 138 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 133
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 134 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 133
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 134 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 133
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 134 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 132
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 133 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 86 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 140
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 141 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 198
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 199 ESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 125 EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHLYETGLESSTKLE 182
+ E+ L + H N+V G C ++G L+ E+LP+GS+ +L ++ K+
Sbjct: 57 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKIN 112
Query: 183 FKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA 242
KQ++ A+ KG+ +L S + VH++ NVLV+ K+ D G++K +E +E
Sbjct: 113 LKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX 170
Query: 243 GPSHGSIVNVFRD-------PEVEESGVFSEMSDIYSFGVFLLELVT 282
V RD PE F SD++SFGV L EL+T
Sbjct: 171 -----XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 130
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 131 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA----KGM 130
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 131 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 101 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 155
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 156 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 213
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 214 ESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 70 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 124
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 125 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 182
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V I AKG+
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----AKGM 132
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G +KLL E+ + G V + +
Sbjct: 133 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 128/290 (44%), Gaps = 45/290 (15%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLR--DTVVAI-KRRVGSPRQ--EFVAEVTYLSEIRHRNL 141
KQ + + + G ++KG + D VV + K R S R+ +F E L H N+
Sbjct: 10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 142 VTLLGYCQQNG--YQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
+ +LG CQ + L+ ++P GS+ N L+E ++ ++ Q V AL A+G+
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEG---TNFVVDQSQAVKFALDMARGMAF 126
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA-GPSHGSIVNVFRDPEV 258
LH+L+P + + +V++DE+ A+++ + ++ P+ + + + PE
Sbjct: 127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPE- 185
Query: 259 EESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAG 318
+D++SF V L ELVT + L + E +
Sbjct: 186 ---DTNRRSADMWSFAVLLWELVTREVP--FADLSNME-------------------IGM 221
Query: 319 TFTTEGMRDLI---------RLTLQCMSSPGRRRPKMEIVMTELERIHEK 359
EG+R I +L CM+ +RPK ++++ LE++ +K
Sbjct: 222 KVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V I AKG+
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----AKGM 132
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G +KLL E+ + G V + +
Sbjct: 133 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 95 IGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFV----AEVTYLSEIRHRNLVTLLGY-CQ 149
IG G FG V++G R VA+K + S R+E AE+ +RH N++ + +
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 74
Query: 150 QNGYQ---MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSIALGAAKGLCHLH--- 201
NG LV +Y +GS+ ++L Y +E KL AL A GL HLH
Sbjct: 75 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--------ALSTASGLAHLHMEI 126
Query: 202 ---SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA---GPSHGSIVNVFRD 255
KP + H++ K+ N+LV +N +AD G++ ++ + P+H +
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 256 PEVEESGVFS------EMSDIYSFGVFLLEL 280
PEV + + + +DIY+ G+ E+
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 95 IGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFV----AEVTYLSEIRHRNLVTLLGY-CQ 149
IG G FG V++G R VA+K + S R+E AE+ +RH N++ + +
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 69
Query: 150 QNGYQ---MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSIALGAAKGLCHLH--- 201
NG LV +Y +GS+ ++L Y +E KL AL A GL HLH
Sbjct: 70 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--------ALSTASGLAHLHMEI 121
Query: 202 ---SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA---GPSHGSIVNVFRD 255
KP + H++ K+ N+LV +N +AD G++ ++ + P+H +
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 256 PEVEESGVFS------EMSDIYSFGVFLLEL 280
PEV + + + +DIY+ G+ E+
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 95 IGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFV----AEVTYLSEIRHRNLVTLLGY-CQ 149
IG G FG V++G R VA+K + S R+E AE+ +RH N++ + +
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 71
Query: 150 QNGYQ---MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSIALGAAKGLCHLH--- 201
NG LV +Y +GS+ ++L Y +E KL AL A GL HLH
Sbjct: 72 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--------ALSTASGLAHLHMEI 123
Query: 202 ---SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA---GPSHGSIVNVFRD 255
KP + H++ K+ N+LV +N +AD G++ ++ + P+H +
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 256 PEVEESGVFS------EMSDIYSFGVFLLEL 280
PEV + + + +DIY+ G+ E+
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V I AKG+
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----AKGM 134
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G +KLL E+ + G V + +
Sbjct: 135 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 95 IGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFV----AEVTYLSEIRHRNLVTLLGY-CQ 149
IG G FG V++G R VA+K + S R+E AE+ +RH N++ + +
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 94
Query: 150 QNGYQ---MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSIALGAAKGLCHLH--- 201
NG LV +Y +GS+ ++L Y +E KL AL A GL HLH
Sbjct: 95 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--------ALSTASGLAHLHMEI 146
Query: 202 ---SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA---GPSHGSIVNVFRD 255
KP + H++ K+ N+LV +N +AD G++ ++ + P+H +
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 256 PEVEESGVFS------EMSDIYSFGVFLLEL 280
PEV + + + +DIY+ G+ E+
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 95 IGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFV----AEVTYLSEIRHRNLVTLLGY-CQ 149
IG G FG V++G R VA+K + S R+E AE+ +RH N++ + +
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 68
Query: 150 QNGYQ---MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSIALGAAKGLCHLH--- 201
NG LV +Y +GS+ ++L Y +E KL AL A GL HLH
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--------ALSTASGLAHLHMEI 120
Query: 202 ---SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA---GPSHGSIVNVFRD 255
KP + H++ K+ N+LV +N +AD G++ ++ + P+H +
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 256 PEVEESGVFS------EMSDIYSFGVFLLEL 280
PEV + + + +DIY+ G+ E+
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 111 TVVAIKRRVGSP-RQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMC 167
V A+K G R + E+ L + H +++ G C+ G + LV EY+P GS+
Sbjct: 47 AVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR 106
Query: 168 NHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
++L + + L F Q++ +G+ +LHS +H+N NVL+D + + K+
Sbjct: 107 DYLPRHSIGLAQLLLFAQQI------CEGMAYLHSQH--YIHRNLAARNVLLDNDRLVKI 158
Query: 228 ADTGISKLLENIEEAG--PSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQE 285
D G++K + E G + PE + F SD++SFGV L EL+T +
Sbjct: 159 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCD 218
Query: 286 AS 287
+S
Sbjct: 219 SS 220
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 47/293 (16%)
Query: 70 GPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVG 120
GP G+RQ+++E+ E +G G FG VY + + ++A+K + G
Sbjct: 1 GPLGSRQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG 53
Query: 121 SPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTK 180
Q EV S +RH N++ L GY L+ EY P G++ L+ +K
Sbjct: 54 VEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSK 107
Query: 181 LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE 240
+ ++ + A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 108 FDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VH 160
Query: 241 EAGPSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA- 297
+ + PE+ E + E D++S GV E + G+ +EA
Sbjct: 161 APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEAN 212
Query: 298 LIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
Q R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 213 TYQETYKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 258
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 95 IGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFV----AEVTYLSEIRHRNLVTLLGY-CQ 149
IG G FG V++G R VA+K + S R+E AE+ +RH N++ + +
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 107
Query: 150 QNGYQ---MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSIALGAAKGLCHLH--- 201
NG LV +Y +GS+ ++L Y +E KL AL A GL HLH
Sbjct: 108 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--------ALSTASGLAHLHMEI 159
Query: 202 ---SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA---GPSHGSIVNVFRD 255
KP + H++ K+ N+LV +N +AD G++ ++ + P+H +
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 256 PEVEESGVFS------EMSDIYSFGVFLLEL 280
PEV + + + +DIY+ G+ E+
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++ G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 83 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 137
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 138 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 33/230 (14%)
Query: 71 PQGARQFSMEELEQAT--------KQFSETSLIGFGSFGPVY--KGLLRDTVVAIKRRVG 120
P G R S+++ + A K FS+ IG GSFG VY + + VVAIK+
Sbjct: 30 PAGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSY 89
Query: 121 SPRQ------EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETG 174
S +Q + + EV +L ++RH N + G + LV EY + + L E
Sbjct: 90 SGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA--SDLLEVH 147
Query: 175 LESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISK 234
+ ++E ++ GA +GL +LHS ++H++ K N+L+ E + K+ D G +
Sbjct: 148 KKPLQEVEI---AAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSAS 202
Query: 235 LLENIEEAGPSHGSI-VNVFRDPEV---EESGVFSEMSDIYSFGVFLLEL 280
++ P++ + + PEV + G + D++S G+ +EL
Sbjct: 203 IM------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V I AKG+
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----AKGM 137
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G +KLL E+ + G V + +
Sbjct: 138 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V I AKG+
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----AKGM 132
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G +KLL E+ + G V + +
Sbjct: 133 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA +G+
Sbjct: 73 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----EGM 127
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 128 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 185
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 186 ESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V I AKG+
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----AKGM 130
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G +KLL E+ + G V + +
Sbjct: 131 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 111 TVVAIKRRVGSP-RQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMC 167
V A+K G R + E+ L + H +++ G C+ G + LV EY+P GS+
Sbjct: 47 AVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR 106
Query: 168 NHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
++L + + L F Q++ +G+ +LH+ +H+N NVL+D + + K+
Sbjct: 107 DYLPRHSIGLAQLLLFAQQI------CEGMAYLHAQH--YIHRNLAARNVLLDNDRLVKI 158
Query: 228 ADTGISKLLENIEEAG--PSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQE 285
D G++K + E G + PE + F SD++SFGV L EL+T +
Sbjct: 159 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCD 218
Query: 286 AS 287
+S
Sbjct: 219 SS 220
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGL-LRD-----TVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+ + ++G G+FG VYKG+ + D VAIK R SP+ +E + E ++ +
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ LLG C + Q LV + +P G + +H+ E + +L + ++ + AKG+
Sbjct: 78 SPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRE----NRGRLGSQDLLNWCMQIAKGM 132
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L ++ LVH++ NVLV K+ D G+++LL+ E + G V + +
Sbjct: 133 SYLEDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E F+ SD++S+GV + EL+T
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++ G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 137
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 138 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++G G+FG VYKGL VAI R SP+ +E + E ++ +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 110 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 164
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 165 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 222
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 223 ESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 112/218 (51%), Gaps = 16/218 (7%)
Query: 75 RQFSMEELEQATKQ----FSETSLIGFGSFGPVYKGLLRDT--VVAIKR-RVGSPRQEFV 127
RQ + + TKQ F +G GS+G VYK + ++T +VAIK+ V S QE +
Sbjct: 13 RQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEII 72
Query: 128 AEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRV 187
E++ + + ++V G +N +V EY GS+ + + L + T E +
Sbjct: 73 KEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR---LRNKTLTE-DEIA 128
Query: 188 SIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSH 246
+I KGL +LH ++ +H++ K N+L++ AK+AD G++ +L + + +
Sbjct: 129 TILQSTLKGLEYLHFMRK--IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI 186
Query: 247 GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
G+ + PEV + ++ ++DI+S G+ +E+ G+
Sbjct: 187 GT--PFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 88 QFSETSLIGFGSFGPVYKGLL------RDTVVAIK--RRVGSPR--QEFVAEVTYLSEIR 137
+F + ++ G+FG VYKGL VAIK R SP+ +E + E ++ +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ ++ LLG C + Q L+ + +P G + +++ E ++ V IA KG+
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGM 130
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDP 256
+L + LVH++ NVLV K+ D G++KLL E+ + G V + +
Sbjct: 131 NYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVT 282
E +++ SD++S+GV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 95 IGFGSFGPVYK----GLLRD---TVVAIK----RRVGSPRQEFVAEVTYLSEIRHRNLVT 143
IG G+FG V++ GLL T+VA+K + +F E ++E + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 144 LLGYCQQNGYQMLVFEYLPNG-------SMCNH----LYETGLESSTK--------LEFK 184
LLG C L+FEY+ G SM H L + L + + L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 185 QRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGP 244
+++ IA A G+ +L K VH++ T N LV EN + K+AD G+S+ + + +
Sbjct: 175 EQLCIARQVAAGMAYLSERK--FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA 232
Query: 245 SHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + + PE ++ SD++++GV L E+ +
Sbjct: 233 DGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVY--KGLLRDTVVAIKRRVGSPRQ---- 124
P A F ++ E K FS+ IG GSFG VY + + VVAIK+ S +Q
Sbjct: 2 PDVAELFFKDDPE---KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEK 58
Query: 125 --EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLE 182
+ + EV +L ++RH N + G + LV EY + + L E + ++E
Sbjct: 59 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQEVE 116
Query: 183 FKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA 242
++ GA +GL +LHS ++H++ K N+L+ E + K+ D G + ++
Sbjct: 117 I---AAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIM------ 165
Query: 243 GPSHGSI-VNVFRDPEV---EESGVFSEMSDIYSFGVFLLEL 280
P++ + + PEV + G + D++S G+ +EL
Sbjct: 166 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 27/231 (11%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLL-------RDTVVAIK----RRVGSPR 123
+Q ++E+ + +F E +G FG VYKG L + VAIK + G R
Sbjct: 16 KQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS----- 178
+EF E + ++H N+V LLG ++ ++F Y +G + L S
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 179 ------TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGI 232
+ LE V + A G+ +L S +VHK+ T NVLV + K++D G+
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGL 191
Query: 233 SKLLENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + + S++ + + PE G FS SDI+S+GV L E+ +
Sbjct: 192 FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 47/293 (16%)
Query: 70 GPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVG 120
G G+RQ+++E+ E +G G FG VY + + ++A+K + G
Sbjct: 1 GAMGSRQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG 53
Query: 121 SPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTK 180
Q EV S +RH N++ L GY L+ EY P G++ L+ +K
Sbjct: 54 VEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSK 107
Query: 181 LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE 240
+ ++ + A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 108 FDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VH 160
Query: 241 EAGPSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA- 297
++ + PE+ E + E D++S GV E + G+ +EA
Sbjct: 161 APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEAN 212
Query: 298 LIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
Q R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 213 TYQETYKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 258
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDT--VVAIK----RRVGSPRQEFVAEVTYLSEIRHRNLV 142
F++ IG GSFG V+KG+ T VVAIK ++ E+T LS+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 143 TLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
G ++ ++ EYL GS + L E G L+ Q +I KGL +LHS
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG-----PLDETQIATILREILKGLDYLHS 122
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEE 260
K +H++ K ANVL+ E+ K+AD G++ L + + + V + PEV +
Sbjct: 123 EKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---IKRNTFVGTPFWMAPEVIK 177
Query: 261 SGVFSEMSDIYSFGVFLLELVTGQ 284
+ +DI+S G+ +EL G+
Sbjct: 178 QSAYDSKADIWSLGITAIELARGE 201
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 98 GSFGPVYKGLLRDTVVAIKRRVGSPRQEFVAE--VTYLSEIRHRNLVTLLGYCQQNGYQM 155
G FG V+K L + VA+K +Q + E V L ++H N++ +G ++ G +
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIG-AEKRGTSV 93
Query: 156 -----LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS-------- 202
L+ + GS+ + L + + + + IA A+GL +LH
Sbjct: 94 DVDLWLITAFHEKGSLSDFL------KANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI-VNVFRDPEVEES 261
KP + H++ K+ NVL+ N A +AD G++ E + AG +HG + + PEV E
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG 207
Query: 262 GVFSEMS-----DIYSFGVFLLELVT 282
+ + D+Y+ G+ L EL +
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT---VVAIKR-RVGSPRQEF----VAEVTYLSEIRH 138
+++ + +G G++G VYK +D+ +VA+KR R+ + + + E++ L E+ H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKA--KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V+L+ LVFE+ M L + E+ T L+ Q +G+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEF-----MEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H + ++H++ K N+L++ + K+AD G+++ I +H + +R P+V
Sbjct: 134 HCHQHR--ILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPDV 190
Query: 259 -EESGVFSEMSDIYSFGVFLLELVTGQ 284
S +S DI+S G E++TG+
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDT--VVAIK----RRVGSPRQEFVAEVTYLSEIRHRNLV 142
F++ IG GSFG V+KG+ T VVAIK ++ E+T LS+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 143 TLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
G ++ ++ EYL GS + L E G L+ Q +I KGL +LHS
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG-----PLDETQIATILREILKGLDYLHS 137
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEE 260
K +H++ K ANVL+ E+ K+AD G++ L + + V + PEV +
Sbjct: 138 EKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI---KRNXFVGTPFWMAPEVIK 192
Query: 261 SGVFSEMSDIYSFGVFLLELVTGQ 284
+ +DI+S G+ +EL G+
Sbjct: 193 QSAYDSKADIWSLGITAIELARGE 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 45/282 (15%)
Query: 70 GPQGA-RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRV 119
GP G+ RQ+++E+ F +G G FG VY R + ++A+K +
Sbjct: 1 GPLGSKRQWTLED-------FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKA 53
Query: 120 GSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESST 179
G Q EV S +RH N++ L GY L+ EY P G++ L+ +
Sbjct: 54 GVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLS 107
Query: 180 KLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENI 239
+ + ++ + A L + HS + ++H++ K N+L+ N K+AD G S +
Sbjct: 108 RFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSNGELKIADFGWS-----V 160
Query: 240 EEAGPSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA 297
++ + PE+ E + E D++S GV E + G + +EA
Sbjct: 161 HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG--------MPPFEA 212
Query: 298 -LIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSS 338
Q R+S F F TEG RDLI L+ +S
Sbjct: 213 HTYQETYRRISRVEFT----FPDFVTEGARDLISRLLKHNAS 250
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDT--VVAIK----RRVGSPRQEFVAEVTYLSEIRHRNLV 142
F++ IG GSFG V+KG+ T VVAIK ++ E+T LS+ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 143 TLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
G ++ ++ EYL GS + L E G L+ Q +I KGL +LHS
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG-----PLDETQIATILREILKGLDYLHS 142
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEE 260
K +H++ K ANVL+ E+ K+AD G++ L + + + V + PEV +
Sbjct: 143 EKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---IKRNTFVGTPFWMAPEVIK 197
Query: 261 SGVFSEMSDIYSFGVFLLELVTGQ 284
+ +DI+S G+ +EL G+
Sbjct: 198 QSAYDSKADIWSLGITAIELARGE 221
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 15/256 (5%)
Query: 111 TVVAIKRRVGSP-RQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMC 167
V A+K G R + E+ L + H +++ G C+ G LV EY+P GS+
Sbjct: 64 AVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR 123
Query: 168 NHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
++L + + L F Q++ +G+ +LH+ +H++ NVL+D + + K+
Sbjct: 124 DYLPRHSIGLAQLLLFAQQI------CEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKI 175
Query: 228 ADTGISKLLENIEEAG--PSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQE 285
D G++K + E G + PE + F SD++SFGV L EL+T +
Sbjct: 176 GDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCD 235
Query: 286 ASHIVSLGSYE--ALIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRR 343
+S E + Q + L ++ + ++ L C + R
Sbjct: 236 SSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFR 295
Query: 344 PKMEIVMTELERIHEK 359
P E ++ L+ +HEK
Sbjct: 296 PTFENLIPILKTVHEK 311
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT---VVAIKR-RVGSPRQEF----VAEVTYLSEIRH 138
+++ + +G G++G VYK +D+ +VA+KR R+ + + + E++ L E+ H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKA--KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V+L+ LVFE+ M L + E+ T L+ Q +G+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEF-----MEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H + ++H++ K N+L++ + K+AD G+++ I +H + +R P+V
Sbjct: 134 HCHQHR--ILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPDV 190
Query: 259 -EESGVFSEMSDIYSFGVFLLELVTGQ 284
S +S DI+S G E++TG+
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 35/219 (15%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEI--RHRNLVTL 144
+Q + +G G +G V++GL VA+K Q + E + + RH N++
Sbjct: 8 RQVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 145 LG---YCQQNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHL 200
+ + + Q+ L+ Y +GS+ + L LE L +A+ AA GL HL
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR------LAVSAACGLAHL 121
Query: 201 H------SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVN--- 251
H KP + H++FK+ NVLV N +AD G++ + G + I N
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM----HSQGSDYLDIGNNPR 177
Query: 252 ----VFRDPEVEESGVFSE------MSDIYSFGVFLLEL 280
+ PEV + + ++ +DI++FG+ L E+
Sbjct: 178 VGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDT--VVAIK----RRVGSPRQEFVAEVTYLSEIRHRNLV 142
F++ IG GSFG V+KG+ T VVAIK ++ E+T LS+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 143 TLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
G ++ ++ EYL GS + L E G L+ Q +I KGL +LHS
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG-----PLDETQIATILREILKGLDYLHS 122
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEE 260
K +H++ K ANVL+ E+ K+AD G++ L + + V + PEV +
Sbjct: 123 EKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---IKRNXFVGTPFWMAPEVIK 177
Query: 261 SGVFSEMSDIYSFGVFLLELVTGQ 284
+ +DI+S G+ +EL G+
Sbjct: 178 QSAYDSKADIWSLGITAIELARGE 201
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFVA-----EVTYLSEIRHR 139
+++ + IG GS+G V+K RDT +VAIK+ + S + E+ L +++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNH--LYETG-LESSTKLEFKQRVSIALGAAKG 196
NLV LL ++ LVFEY C+H L+E + + ++ A
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEY------CDHTVLHELDRYQRGVPEHLVKSITWQTLQAVN 116
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV---- 252
CH H+ +H++ K N+L+ ++ + K+ D G ++LL GPS V
Sbjct: 117 FCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLL-----TGPSDYYDDEVATRW 167
Query: 253 FRDPEVEESGV-FSEMSDIYSFGVFLLELVTG 283
+R PE+ + D+++ G EL++G
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 89 FSETSL-----IGFGSFGPVYKGLLRDTVVAIKRRV-------GSPRQEFVAEVTYLSEI 136
F ET L +G G FG V+KG+ +IK V S RQ F A ++ I
Sbjct: 28 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 87
Query: 137 ---RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
H ++V LLG C + Q LV +YLP GS+ +H+ + +L V I
Sbjct: 88 GSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI---- 142
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL-ENIEEAGPSHGSIVNV 252
AKG+ +L +VH+N NVL+ +VAD G++ LL + ++ S
Sbjct: 143 AKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ E G ++ SD++S+GV + EL+T
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 45/282 (15%)
Query: 70 GPQGA-RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRV 119
GP G+ RQ+++E+ F +G G FG VY R + ++A+K +
Sbjct: 1 GPLGSKRQWTLED-------FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKA 53
Query: 120 GSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESST 179
G Q EV S +RH N++ L GY L+ EY P G++ L+ +
Sbjct: 54 GVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLS 107
Query: 180 KLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENI 239
+ + ++ + A L + HS + ++H++ K N+L+ N K+AD G S +
Sbjct: 108 RFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSNGELKIADFGWS-----V 160
Query: 240 EEAGPSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA 297
++ + PE+ E + E D++S GV E + G + +EA
Sbjct: 161 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG--------MPPFEA 212
Query: 298 -LIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSS 338
Q R+S F F TEG RDLI L+ +S
Sbjct: 213 HTYQETYRRISRVEFT----FPDFVTEGARDLISRLLKHNAS 250
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 89 FSETSL-----IGFGSFGPVYKGLLRDTVVAIKRRV-------GSPRQEFVAEVTYLSEI 136
F ET L +G G FG V+KG+ +IK V S RQ F A ++ I
Sbjct: 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 137 ---RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
H ++V LLG C + Q LV +YLP GS+ +H+ + +L V I
Sbjct: 70 GSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI---- 124
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL-ENIEEAGPSHGSIVNV 252
AKG+ +L +VH+N NVL+ +VAD G++ LL + ++ S
Sbjct: 125 AKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ E G ++ SD++S+GV + EL+T
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 94 LIGFGSFGPVYKGLLRDT--VVAIKRRVG---SPRQEFVAEVTYLSEIRHRNLVTLLGYC 148
++G G FG K R+T V+ +K + ++ F+ EV + + H N++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 149 QQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLHSLKPP 206
++ + EY+ G++ G+ S ++ + QRVS A A G+ +LHS+
Sbjct: 77 YKDKRLNFITEYIKGGTL------RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN-- 128
Query: 207 LVHKNFKTANVLVDENFIAKVADTGISKLL--ENIEEAG------PSHGSIVNV-----F 253
++H++ + N LV EN VAD G+++L+ E + G P V +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 254 RDPEVEESGVFSEMSDIYSFGVFLLELV 281
PE+ + E D++SFG+ L E++
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 34/230 (14%)
Query: 70 GPQGARQFSMEELEQATKQFSETSLIGFGSFGPV----YKGLLRDT--VVAIKRRVGS-P 122
GPQ F L+ ++ +G G+FG V Y L +T +VA+K+ S P
Sbjct: 1 GPQDPTIFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP 53
Query: 123 RQ--EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLE 176
Q +F E+ L + +V G G Q LV EYLP+G + + L + L+
Sbjct: 54 DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD 113
Query: 177 SSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL 236
+S L + ++ KG+ +L S + VH++ N+LV+ K+AD G++KLL
Sbjct: 114 ASRLLLYSSQI------CKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLL 165
Query: 237 ENIEE----AGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
++ P I + PE +FS SD++SFGV L EL T
Sbjct: 166 PLDKDYYVVREPGQSPIF--WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 87 KQFSETSLIGFGSFGPV----YKGLLRDT--VVAIKRRVGS-PRQ--EFVAEVTYLSEIR 137
+ S +G G+FG V Y L +T +VA+K+ S P Q +F E+ L +
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 69
Query: 138 HRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSIALGA 193
+V G G Q LV EYLP+G + + L + L++S L + ++
Sbjct: 70 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------ 123
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE----AGPSHGSI 249
KG+ +L S + VH++ N+LV+ K+AD G++KLL ++ P I
Sbjct: 124 CKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 181
Query: 250 VNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ PE +FS SD++SFGV L EL T
Sbjct: 182 F--WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 87 KQFSETSLIGFGSFGPV----YKGLLRDT--VVAIKRRVGS-PRQ--EFVAEVTYLSEIR 137
+ S +G G+FG V Y L +T +VA+K+ S P Q +F E+ L +
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82
Query: 138 HRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSIALGA 193
+V G G Q LV EYLP+G + + L + L++S L + ++
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------ 136
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE----AGPSHGSI 249
KG+ +L S + VH++ N+LV+ K+AD G++KLL ++ P I
Sbjct: 137 CKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 194
Query: 250 VNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ PE +FS SD++SFGV L EL T
Sbjct: 195 F--WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 27/227 (11%)
Query: 79 MEELEQATKQFSETSLIGFGSFGPVYKGLL-------RDTVVAIK----RRVGSPRQEFV 127
++E+ + +F E +G FG VYKG L + VAIK + G R+EF
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 128 AEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--------- 178
E + ++H N+V LLG ++ ++F Y +G + L S
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 179 --TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL 236
+ LE V + A G+ +L S +VHK+ T NVLV + K++D G+ + +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 237 ENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ S++ + + PE G FS SDI+S+GV L E+ +
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 47/290 (16%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPR 123
RQ+++E+ E +G G FG VY +++ ++A+K + G
Sbjct: 1 AKRQWALEDFEIGRP-------LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEH 53
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEF 183
Q EV S +RH N++ L GY + L+ EY P G++ L+ +K +
Sbjct: 54 Q-LRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRE-----LQKLSKFDE 107
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
++ + A L + HS K ++H++ K N+L+ K+AD G S +
Sbjct: 108 QRTATYITELANALSYCHSKK--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPS 160
Query: 244 PSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQ 300
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQ 212
Query: 301 WVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 213 DTYKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 255
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 94/192 (48%), Gaps = 21/192 (10%)
Query: 95 IGFGSFGPVYKGLL-RDTVVAIKR-RVGSPRQE-FVAEVTYLSEIRHRNLVTLLGYCQQN 151
+G G FG V+ + T VA+K + GS E F+AE + ++H LV L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 249
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
++ E++ GS+ + L + +K + + + A+G+ + +H++
Sbjct: 250 PIYIIT-EFMAKGSLLDFLKS---DEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRD 303
Query: 212 FKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDI 270
+ AN+LV + + K+AD G++++ G+ + + PE G F+ SD+
Sbjct: 304 LRAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAPEAINFGSFTIKSDV 352
Query: 271 YSFGVFLLELVT 282
+SFG+ L+E+VT
Sbjct: 353 WSFGILLMEIVT 364
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDT--VVAIK----RRVGSPRQEFVAEVTYLSEIRHRNLV 142
F++ IG GSFG VYKG+ T VVAIK ++ E+T LS+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 143 TLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
G ++ ++ EYL GS + L LE + +I KGL +LHS
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEET------YIATILREILKGLDYLHS 134
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEE 260
+ +H++ K ANVL+ E K+AD G++ L + + V + PEV +
Sbjct: 135 ERK--IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---IKRNXFVGTPFWMAPEVIK 189
Query: 261 SGVFSEMSDIYSFGVFLLELVTGQ 284
+ +DI+S G+ +EL G+
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGE 213
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 29/212 (13%)
Query: 98 GSFGPVYKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE--IRHRNLVTLLGYCQQNGYQM 155
G FG V+K L + VA+K +Q + +E S ++H NL+ + ++ G +
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIA-AEKRGSNL 84
Query: 156 -----LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS-------- 202
L+ + GS+ ++L + + + +A ++GL +LH
Sbjct: 85 EVELWLITAFHDKGSLTDYL------KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 203 -LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI-VNVFRDPEVEE 260
KP + H++FK+ NVL+ + A +AD G++ E + G +HG + + PEV E
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLE 198
Query: 261 SGVFSEMS-----DIYSFGVFLLELVTGQEAS 287
+ + D+Y+ G+ L ELV+ +A+
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVSRCKAA 230
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDT--VVAIK----RRVGSPRQEFVAEVTYLSEIRHRNLV 142
F++ IG GSFG V+KG+ T VVAIK ++ E+T LS+ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 143 TLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
G + ++ EYL GS + L + EF Q ++ KGL +LHS
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFD-----EF-QIATMLKEILKGLDYLHS 138
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEE 260
K +H++ K ANVL+ E K+AD G++ L + + + V + PEV +
Sbjct: 139 EKK--IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---IKRNTFVGTPFWMAPEVIQ 193
Query: 261 SGVFSEMSDIYSFGVFLLELVTGQ 284
+ +DI+S G+ +EL G+
Sbjct: 194 QSAYDSKADIWSLGITAIELAKGE 217
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 47/290 (16%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPR 123
G RQ+++E+ E +G G FG VY + + ++A+K + G
Sbjct: 1 GPRQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 53
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEF 183
Q EV S +RH N++ L GY L+ EY P G++ L+ +K +
Sbjct: 54 Q-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDE 107
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
++ + A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 108 QRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPS 160
Query: 244 PSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQ 300
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 161 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQ 212
Query: 301 WVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 213 ETYKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 255
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 94 LIGFGSFGPVYK----GLLRDTV---VAIK----RRVGSPRQEFVAEVTYLSEI-RHRNL 141
++G G+FG V G+ + V VA+K + S R+ ++E+ ++++ H N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLY---------ETGLESSTKLE---------F 183
V LLG C +G L+FEY G + N+L E E+ +LE F
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISK-LLENIEEA 242
+ + A AKG+ L VH++ NVLV + K+ D G+++ ++ +
Sbjct: 172 EDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 243 GPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + + PE G+++ SD++S+G+ L E+ +
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 51/316 (16%)
Query: 84 QATKQFSETSLIGFGSFGPVYKGLL-------RDTVVA---IKRRVGSPRQEFVAEVTYL 133
Q+ +++ IG GSFG K +L R V+ I R R+E EV L
Sbjct: 21 QSMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL 77
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+ ++H N+V ++NG +V +Y G + + + + Q + +
Sbjct: 78 ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI---NAQKGVLFQEDQILDWFVQI 134
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN-IEEAGPSHGSIVNV 252
L H+H K ++H++ K+ N+ + ++ ++ D GI+++L + +E A G+
Sbjct: 135 CLALKHVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGT--PY 190
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFV 312
+ PE+ E+ ++ SDI++ G L EL T H GS + L+ +
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCT---LKHAFEAGSMKNLVLKI---------- 237
Query: 313 DHRLAGTFTTEGMR---DLIRLTLQCMSSPGRRRPKMEIVMTE---LERIHE-------- 358
++G+F + DL L Q R RP + ++ + +RI +
Sbjct: 238 ---ISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIA 294
Query: 359 KEMALTTFMGEGTATI 374
+E L TF G+ I
Sbjct: 295 EEFCLKTFSKFGSQPI 310
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 47/290 (16%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPR 123
G RQ+++E+ E +G G FG VY + + ++A+K + G
Sbjct: 1 GPRQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 53
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEF 183
Q EV S +RH N++ L GY L+ EY P G++ L+ +K +
Sbjct: 54 Q-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDE 107
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
++ + A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 108 QRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPS 160
Query: 244 PSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQ 300
+ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 161 SRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQ 212
Query: 301 WVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 213 ETYKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 255
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 81 ELEQATKQFSETSLIGFGSFGPVYKG----------LLRDTVVAIKRRVGSPRQE-FVAE 129
E + QF +T +G G+FG V + +L+ V +K + +E ++E
Sbjct: 34 EFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 91
Query: 130 VTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----YETGLESSTKLEF 183
+ +S + +H N+V LLG C G +++ EY G + N L + E LE
Sbjct: 92 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 151
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
+ + + A+G+ L S +H++ NVL+ +AK+ D G+++ + N
Sbjct: 152 RDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 209
Query: 244 PSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + V + PE V++ SD++S+G+ L E+ +
Sbjct: 210 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 47/290 (16%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPR 123
G RQ+++E+ E +G G FG VY + + ++A+K + G
Sbjct: 1 GKRQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 53
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEF 183
Q EV S +RH N++ L GY L+ EY P G++ L+ +K +
Sbjct: 54 Q-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDE 107
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
++ + A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 108 QRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPS 160
Query: 244 PSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQ 300
+ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 161 SRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQ 212
Query: 301 WVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 213 ETYKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 255
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 81 ELEQATKQFSETSLIGFGSFGPVYKG----------LLRDTVVAIKRRVGSPRQE-FVAE 129
E + QF +T +G G+FG V + +L+ V +K + +E ++E
Sbjct: 42 EFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 130 VTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL-----YETGLESSTKLEF 183
+ +S + +H N+V LLG C G +++ EY G + N L + E LE
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 159
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
+ + + A+G+ L S +H++ NVL+ +AK+ D G+++ + N
Sbjct: 160 RDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 217
Query: 244 PSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + V + PE V++ SD++S+G+ L E+ +
Sbjct: 218 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 27/213 (12%)
Query: 87 KQFSETSLIGFGSFGPV----YKGLLRDT--VVAIKRRVGS-PRQ--EFVAEVTYLSEIR 137
+ S +G G+FG V Y L +T +VA+K+ S P Q +F E+ L +
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 66
Query: 138 HRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHL--YETGLESSTKLEFKQRVSIALGA 193
+V G G LV EYLP+G + + L + L++S L + ++
Sbjct: 67 SDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------ 120
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG----PSHGSI 249
KG+ +L S + VH++ N+LV+ K+AD G++KLL ++ P I
Sbjct: 121 CKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI 178
Query: 250 VNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ PE +FS SD++SFGV L EL T
Sbjct: 179 F--WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 13/177 (7%)
Query: 111 TVVAIKRRVGSP-RQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMC 167
V A+K G R + E+ L + H ++V G C+ G + LV EY+P GS+
Sbjct: 42 AVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLR 101
Query: 168 NHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
++L + + L F Q++ +G+ +LH+ +H+ NVL+D + + K+
Sbjct: 102 DYLPRHCVGLAQLLLFAQQI------CEGMAYLHAQH--YIHRALAARNVLLDNDRLVKI 153
Query: 228 ADTGISKLLENIEEAG--PSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
D G++K + E G + PE + F SD++SFGV L EL+T
Sbjct: 154 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 13/177 (7%)
Query: 111 TVVAIKRRVGSP-RQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQ--MLVFEYLPNGSMC 167
V A+K G R + E+ L + H ++V G C+ G + LV EY+P GS+
Sbjct: 41 AVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLR 100
Query: 168 NHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
++L + + L F Q++ +G+ +LH+ +H+ NVL+D + + K+
Sbjct: 101 DYLPRHCVGLAQLLLFAQQI------CEGMAYLHAQH--YIHRALAARNVLLDNDRLVKI 152
Query: 228 ADTGISKLLENIEEAG--PSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
D G++K + E G + PE + F SD++SFGV L EL+T
Sbjct: 153 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 47/290 (16%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPR 123
G RQ+++E+ E +G G FG VY + + ++A+K + G
Sbjct: 1 GKRQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 53
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEF 183
Q EV S +RH N++ L GY L+ EY P G++ L+ +K +
Sbjct: 54 Q-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDE 107
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
++ + A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 108 QRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPS 160
Query: 244 PSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQ 300
+ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 161 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQ 212
Query: 301 WVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 213 ETYKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 255
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 8 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 59
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G + L+ +K + ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKE-----LQKLSKFDEQR 114
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 115 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 167
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 168 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 219
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 220 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 260
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 34/215 (15%)
Query: 94 LIGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFVAE--VTYLSEIRHRNLVTLL---GYC 148
LIG G +G VYKG L + VA+K + RQ F+ E + + + H N+ +
Sbjct: 20 LIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERV 79
Query: 149 QQNGYQ--MLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS---- 202
+G +LV EY PNGS+ +L L +S ++ +A +GL +LH+
Sbjct: 80 TADGRMEYLLVMEYYPNGSLXKYL---SLHTS---DWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 203 ---LKPPLVHKNFKTANVLVDENFIAKVADTGIS------KLLENIEEAGPSHGSIVNV- 252
KP + H++ + NVLV + ++D G+S +L+ EE + + +
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 253 FRDPEVEESGV-------FSEMSDIYSFGVFLLEL 280
+ PEV E V + D+Y+ G+ E+
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 72 QGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGL-----LRDTVVAIKRRVGSPRQEF 126
+G + + E + + + ++G G++G VY G +R + I R Q
Sbjct: 7 EGDCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPL 66
Query: 127 VAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYE-----TGLESSTKL 181
E+ ++H+N+V LG +NG+ + E +P GS+ L E +
Sbjct: 67 HEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF 126
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDE-NFIAKVADTGISKLLENIE 240
KQ + +GL +LH + +VH++ K NVL++ + + K++D G SK L I
Sbjct: 127 YTKQIL-------EGLKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177
Query: 241 EAGPSHGSIVNVFRDPEVEESGV--FSEMSDIYSFGVFLLELVTGQ 284
+ + + PE+ + G + + +DI+S G ++E+ TG+
Sbjct: 178 PCTETFTGTLQ-YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 70 GPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GS 121
GP G+ +F ME ++ K IG G++G VYK L VVA+K+ R+ G
Sbjct: 1 GPLGSPEF-MENFQKVEK-------IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 52
Query: 122 PRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL 181
P + E++ L E+ H N+V LL LVFE+L + + + + L + L
Sbjct: 53 PSTA-IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASAL-TGIPL 109
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
+ L CH H ++H++ K N+L++ K+AD G+++ +
Sbjct: 110 PLIKSYLFQLLQGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPV 164
Query: 242 AGPSHGSIVNVFRDPEV-EESGVFSEMSDIYSFGVFLLELVT 282
+H + +R PE+ +S DI+S G E+VT
Sbjct: 165 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 29 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 80
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 135
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 136 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 188
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
+ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 189 RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 240
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 241 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 281
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKR-----RVGSPRQEFVAEVTYLSEIR 137
++ QF + +G G++ VYKGL + T VA+K G+P + E++ + E++
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTA-IREISLMKELK 61
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
H N+V L LVFE++ N T + LE +GL
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPE 257
H K ++H++ K N+L+++ K+ D G+++ I S + +R P+
Sbjct: 122 AFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTFSSEVVTLWYRAPD 178
Query: 258 V-EESGVFSEMSDIYSFGVFLLELVTGQ 284
V S +S DI+S G L E++TG+
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 29 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 80
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 135
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 136 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 188
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 189 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 240
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 241 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 281
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 70 GPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GS 121
GP G+ +F ME ++ K IG G++G VYK L VVA+K+ R+ G
Sbjct: 1 GPLGSPEF-MENFQKVEK-------IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 52
Query: 122 PRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL 181
P + E++ L E+ H N+V LL LVFE+L + + L
Sbjct: 53 PSTA-IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPL 109
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
+ L CH H ++H++ K N+L++ K+AD G+++ +
Sbjct: 110 PLIKSYLFQLLQGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPV 164
Query: 242 AGPSHGSIVNVFRDPEV-EESGVFSEMSDIYSFGVFLLELVT 282
+H + +R PE+ +S DI+S G E+VT
Sbjct: 165 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 120/290 (41%), Gaps = 47/290 (16%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPR 123
RQ+++E+ E +G G FG VY + + ++A+K + G
Sbjct: 1 AKRQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 53
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEF 183
Q EV S +RH N++ L GY L+ EY P G++ L+ +K +
Sbjct: 54 Q-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDE 107
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG 243
++ + A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 108 QRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPS 160
Query: 244 PSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQ 300
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP--------PFEANTYQ 212
Query: 301 WVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 213 ETYKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 255
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 91 ETSLIGFGSFGPVYKGLLR-------DTVVAIKRRVGSP--RQEFVAEVTYLSEIRHRNL 141
E +G G+FG V KG + V +K P + E +AE + ++ + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYET-GLESSTKLEFKQRVSIALGAAKGLCHL 200
V ++G C+ + MLV E G + +L + ++ +E +VS+ G+ +L
Sbjct: 433 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYL 485
Query: 201 HSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL---ENIEEAGPSHGSIVNVFRDPE 257
VH++ NVL+ AK++D G+SK L EN +A +HG + PE
Sbjct: 486 EESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ-THGKWPVKWYAPE 542
Query: 258 VEESGVFSEMSDIYSFGVFLLE 279
FS SD++SFGV + E
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWE 564
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 91 ETSLIGFGSFGPVYKGLLR-------DTVVAIKRRVGSP--RQEFVAEVTYLSEIRHRNL 141
E +G G+FG V KG + V +K P + E +AE + ++ + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYET-GLESSTKLEFKQRVSIALGAAKGLCHL 200
V ++G C+ + MLV E G + +L + ++ +E +VS+ G+ +L
Sbjct: 434 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYL 486
Query: 201 HSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL---ENIEEAGPSHGSIVNVFRDPE 257
VH++ NVL+ AK++D G+SK L EN +A +HG + PE
Sbjct: 487 EESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ-THGKWPVKWYAPE 543
Query: 258 VEESGVFSEMSDIYSFGVFLLE 279
FS SD++SFGV + E
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWE 565
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 4 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 55
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 110
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 111 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 163
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 164 RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 215
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 216 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 256
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 94 LIGFGSFGPVYKGL-----LRDTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYC 148
++G G++G VY G +R + I R Q E+ ++H+N+V LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 149 QQNGYQMLVFEYLPNGSMCNHLYE-----TGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
+NG+ + E +P GS+ L E + KQ + +GL +LH
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-------EGLKYLHDN 127
Query: 204 KPPLVHKNFKTANVLVDE-NFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESG 262
+ +VH++ K NVL++ + + K++D G SK L I + + + PE+ + G
Sbjct: 128 Q--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ-YMAPEIIDKG 184
Query: 263 V--FSEMSDIYSFGVFLLELVTGQ 284
+ + +DI+S G ++E+ TG+
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGK 208
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 30/212 (14%)
Query: 88 QFSETSLIGFGSFGPVY---------------KGLLRDTVVAIKRRVGSPRQEFVAEVTY 132
QF ++G GSFG V+ +L+ + ++ RV + E
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTK-----MERDI 80
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALG 192
L E+ H +V L Q G L+ ++L G + L + + + ++F +AL
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALA 139
Query: 193 AAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV 252
L HLHSL +++++ K N+L+DE K+ D G+SK E+I+ ++ V
Sbjct: 140 ----LDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTV 191
Query: 253 -FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PEV ++ +D +SFGV + E++TG
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 91 ETSLIGFGSFGPVYKGLLR-------DTVVAIKRRVGSP--RQEFVAEVTYLSEIRHRNL 141
E +G G+FG V KG + V +K P + E +AE + ++ + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V ++G C+ + MLV E G + +L + + ++ K + + + G+ +L
Sbjct: 69 VRMIGICEAESW-MLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVSMGMKYLE 122
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL---ENIEEAGPSHGSIVNVFRDPEV 258
+ VH++ NVL+ AK++D G+SK L EN +A +HG + PE
Sbjct: 123 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPEC 179
Query: 259 EESGVFSEMSDIYSFGVFLLE 279
FS SD++SFGV + E
Sbjct: 180 INYYKFSSKSDVWSFGVLMWE 200
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 8 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 59
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 114
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 115 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 167
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 168 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 219
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 220 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 260
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 118/288 (40%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 8 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 59
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G + L+ +K + ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKE-----LQKLSKFDEQR 114
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 115 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 167
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
+ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 168 RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 219
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 220 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 260
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 20/221 (9%)
Query: 72 QGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT-----VVAIKR----RVGSP 122
QGA S + E ++ IG G FG V++G+ VAIK S
Sbjct: 23 QGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV 82
Query: 123 RQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY--ETGLESSTK 180
R++F+ E + + H ++V L+G +N ++ E G + + L + L+ ++
Sbjct: 83 REKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASL 141
Query: 181 LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE 240
+ + ++S AL +L S + VH++ NVLV N K+ D G+S+ +E+
Sbjct: 142 ILYAYQLSTALA------YLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 193
Query: 241 EAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELV 281
S G + + PE F+ SD++ FGV + E++
Sbjct: 194 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 30/212 (14%)
Query: 88 QFSETSLIGFGSFGPVY---------------KGLLRDTVVAIKRRVGSPRQEFVAEVTY 132
QF ++G GSFG V+ +L+ + ++ RV + E
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTK-----MERDI 79
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALG 192
L E+ H +V L Q G L+ ++L G + L + + + ++F +AL
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALA 138
Query: 193 AAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV 252
L HLHSL +++++ K N+L+DE K+ D G+SK E+I+ ++ V
Sbjct: 139 ----LDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTV 190
Query: 253 -FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PEV ++ +D +SFGV + E++TG
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 91 ETSLIGFGSFGPVYKGLLR-------DTVVAIKRRVGSP--RQEFVAEVTYLSEIRHRNL 141
E +G G+FG V KG + V +K P + E +AE + ++ + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V ++G C+ + MLV E G + +L + + ++ K + + + G+ +L
Sbjct: 81 VRMIGICEAESW-MLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVSMGMKYLE 134
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL---ENIEEAGPSHGSIVNVFRDPEV 258
+ VH++ NVL+ AK++D G+SK L EN +A +HG + PE
Sbjct: 135 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPEC 191
Query: 259 EESGVFSEMSDIYSFGVFLLE 279
FS SD++SFGV + E
Sbjct: 192 INYYKFSSKSDVWSFGVLMWE 212
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 30/212 (14%)
Query: 88 QFSETSLIGFGSFGPVY---------------KGLLRDTVVAIKRRVGSPRQEFVAEVTY 132
QF ++G GSFG V+ +L+ + ++ RV + E
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTK-----MERDI 79
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALG 192
L E+ H +V L Q G L+ ++L G + L + + + ++F +AL
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALA 138
Query: 193 AAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV 252
L HLHSL +++++ K N+L+DE K+ D G+SK E+I+ ++ V
Sbjct: 139 ----LDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTV 190
Query: 253 -FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PEV ++ +D +SFGV + E++TG
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 7 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 58
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 113
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 114 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 166
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 167 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 218
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 219 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 6 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 57
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 112
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 113 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 165
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 217
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 218 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 258
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 91 ETSLIGFGSFGPVYKGLLR-------DTVVAIKRRVGSP--RQEFVAEVTYLSEIRHRNL 141
E +G G+FG V KG + V +K P + E +AE + ++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V ++G C+ + MLV E G + +L + + ++ K + + + G+ +L
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVSMGMKYLE 128
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL---ENIEEAGPSHGSIVNVFRDPEV 258
+ VH++ NVL+ AK++D G+SK L EN +A +HG + PE
Sbjct: 129 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPEC 185
Query: 259 EESGVFSEMSDIYSFGVFLLE 279
FS SD++SFGV + E
Sbjct: 186 INYYKFSSKSDVWSFGVLMWE 206
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 91 ETSLIGFGSFGPVYKGLLR-------DTVVAIKRRVGSP--RQEFVAEVTYLSEIRHRNL 141
E +G G+FG V KG + V +K P + E +AE + ++ + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V ++G C+ + MLV E G + +L + + ++ K + + + G+ +L
Sbjct: 71 VRMIGICEAESW-MLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVSMGMKYLE 124
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL---ENIEEAGPSHGSIVNVFRDPEV 258
+ VH++ NVL+ AK++D G+SK L EN +A +HG + PE
Sbjct: 125 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPEC 181
Query: 259 EESGVFSEMSDIYSFGVFLLE 279
FS SD++SFGV + E
Sbjct: 182 INYYKFSSKSDVWSFGVLMWE 202
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 49/289 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 4 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 55
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 110
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S A S
Sbjct: 111 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSC------HAPSS 162
Query: 246 HGSIVNVFRD---PEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQW 301
+ ++ D PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 163 RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQE 214
Query: 302 VRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 215 TYKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 256
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 20 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 71
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 72 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 126
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 127 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 179
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 180 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK--------PPFEANTYQET 231
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 232 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 272
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 8 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 59
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 114
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 115 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 167
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
+ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 168 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 219
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 220 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 2 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 53
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 54 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 108
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 109 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 161
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 162 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 213
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 214 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 254
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 91 ETSLIGFGSFGPVYKGLLR-------DTVVAIKRRVGSP--RQEFVAEVTYLSEIRHRNL 141
E +G G+FG V KG + V +K P + E +AE + ++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V ++G C+ + MLV E G + +L + + ++ K + + + G+ +L
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVSMGMKYLE 128
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL---ENIEEAGPSHGSIVNVFRDPEV 258
+ VH++ NVL+ AK++D G+SK L EN +A +HG + PE
Sbjct: 129 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKA-QTHGKWPVKWYAPEC 185
Query: 259 EESGVFSEMSDIYSFGVFLLE 279
FS SD++SFGV + E
Sbjct: 186 INYYKFSSKSDVWSFGVLMWE 206
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 91 ETSLIGFGSFGPVYKGLLR-------DTVVAIKRRVGSP--RQEFVAEVTYLSEIRHRNL 141
E +G G+FG V KG + V +K P + E +AE + ++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V ++G C+ + MLV E G + +L + + ++ K + + + G+ +L
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVSMGMKYLE 144
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL---ENIEEAGPSHGSIVNVFRDPEV 258
+ VH++ NVL+ AK++D G+SK L EN +A +HG + PE
Sbjct: 145 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ-THGKWPVKWYAPEC 201
Query: 259 EESGVFSEMSDIYSFGVFLLE 279
FS SD++SFGV + E
Sbjct: 202 INYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 91 ETSLIGFGSFGPVYKGLLR-------DTVVAIKRRVGSP--RQEFVAEVTYLSEIRHRNL 141
E +G G+FG V KG + V +K P + E +AE + ++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V ++G C+ + MLV E G + +L + + ++ K + + + G+ +L
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVSMGMKYLE 144
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL---ENIEEAGPSHGSIVNVFRDPEV 258
+ VH++ NVL+ AK++D G+SK L EN +A +HG + PE
Sbjct: 145 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ-THGKWPVKWYAPEC 201
Query: 259 EESGVFSEMSDIYSFGVFLLE 279
FS SD++SFGV + E
Sbjct: 202 INYYKFSSKSDVWSFGVLMWE 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 91 ETSLIGFGSFGPVYKGLLR-------DTVVAIKRRVGSP--RQEFVAEVTYLSEIRHRNL 141
E +G G+FG V KG + V +K P + E +AE + ++ + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V ++G C+ + MLV E G + +L + + ++ K + + + G+ +L
Sbjct: 89 VRMIGICEAESW-MLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVSMGMKYLE 142
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL---ENIEEAGPSHGSIVNVFRDPEV 258
+ VH++ NVL+ AK++D G+SK L EN +A +HG + PE
Sbjct: 143 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ-THGKWPVKWYAPEC 199
Query: 259 EESGVFSEMSDIYSFGVFLLE 279
FS SD++SFGV + E
Sbjct: 200 INYYKFSSKSDVWSFGVLMWE 220
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 6 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 57
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 112
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 113 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 165
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 217
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 218 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 258
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 121/290 (41%), Gaps = 45/290 (15%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLR--DTVVAI-KRRVGSPRQ--EFVAEVTYLSEIRHRNL 141
KQ + + + G ++KG + D VV + K R S R+ +F E L H N+
Sbjct: 10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 142 VTLLGYCQQNG--YQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
+ +LG CQ + L+ + P GS+ N L+E ++ ++ Q V AL A+G
Sbjct: 70 LPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEG---TNFVVDQSQAVKFALDXARGXAF 126
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENI-EEAGPSHGSIVNVFRDPEV 258
LH+L+P + + +V +DE+ A+++ + ++ P+ + + + PE
Sbjct: 127 LHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPE- 185
Query: 259 EESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAG 318
+D +SF V L ELVT + + + + +
Sbjct: 186 ---DTNRRSADXWSFAVLLWELVTRE---------------------VPFADLSNXEIGX 221
Query: 319 TFTTEGMRDLI---------RLTLQCMSSPGRRRPKMEIVMTELERIHEK 359
EG+R I +L C + +RPK + ++ LE+ +K
Sbjct: 222 KVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQDK 271
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 3 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 54
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 109
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 110 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 162
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
+ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP--------PFEANTYQET 214
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 215 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 4 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 55
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 110
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 111 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 163
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
+ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 215
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 216 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 5 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 56
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 57 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 111
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 112 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 164
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
+ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 165 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 216
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 217 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 3 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 54
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 109
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 110 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 162
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
+ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 214
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 215 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 118/288 (40%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 8 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 59
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 114
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 115 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 167
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
++ + PE E E D++S GV E + G+ +EA Q
Sbjct: 168 RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 219
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 220 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPXLREVL 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 40/280 (14%)
Query: 83 EQATKQFSETSLIGFGSFGPVY--KGLLRDTVVAIK-------RRVGSPRQEFVAEVTYL 133
+ A + F +G G FG VY + R ++A+K + G Q EV
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQ-LRREVEIQ 59
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
S +RH N++ L GY L+ EY P G++ L+ +K + ++ +
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQRTATYITEL 114
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV- 252
A L + HS + ++H++ K N+L+ K+AD G S + ++
Sbjct: 115 ANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 167
Query: 253 -FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWVRSRLSSNN 310
+ PE+ E + E D++S GV E + G+ +EA Q R+S
Sbjct: 168 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQETYKRISRVE 219
Query: 311 FVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
F F TEG RDLI L+ S +RP + V+
Sbjct: 220 FT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 252
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 6 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 57
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 112
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+AD G S +
Sbjct: 113 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 165
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
+ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 166 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 217
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 218 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 258
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDT--VVAIK--RRVGSPRQEFVAEVTYLSEI-RHRNLVT 143
F L+G G++G VYKG T + AIK G +E E+ L + HRN+ T
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 144 LLG-YCQQNGYQM-----LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
G + ++N M LV E+ GS+ + + T L+ + I +GL
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGL 142
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI-VNVFRDP 256
HLH K ++H++ K NVL+ EN K+ D G+S L+ G + I + P
Sbjct: 143 SHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAP 198
Query: 257 EV-----EESGVFSEMSDIYSFGVFLLELVTG 283
EV + SD++S G+ +E+ G
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 88 QFSETSLIGFGSFGPVY---------------KGLLRDTVVAIKRRVGSPRQEFVAEVTY 132
F ++G GSFG V+ +L+ + ++ RV + E
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTK-----MERDI 83
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALG 192
L+++ H +V L Q G L+ ++L G + L + + + ++F +ALG
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALG 142
Query: 193 AAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV 252
L HLHSL +++++ K N+L+DE K+ D G+SK + E+ S V
Sbjct: 143 ----LDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVE- 195
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PEV S +D +S+GV + E++TG
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 35/278 (12%)
Query: 94 LIGFGSFGPVYKGLLRDTV-----VAIKR--RVGSPRQ--EFVAEVTYLSEIRHRNLVTL 144
+IG G FG VY G D AIK R+ +Q F+ E + + H N++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 145 LG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
+G G ++ Y+ +G + + + K +S L A+G+ +L
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVK----DLISFGLQVARGMEYLAEQ 143
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS---HGSIVNVFRDPEVEE 260
K VH++ N ++DE+F KVAD G+++ + + E H + + E +
Sbjct: 144 K--FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 261 SGVFSEMSDIYSFGVFLLELVT--GQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLAG 318
+ F+ SD++SFGV L EL+T HI L Q RL +
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ--GRRLPQPEYCPD---- 255
Query: 319 TFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERI 356
L ++ QC + RP +++ E+E+I
Sbjct: 256 --------SLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 95 IGFGSFGPVYKGLLRD-----TVVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
IG G FG V++G+ VAIK S R++F+ E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
G +N ++ E G + + L L+ + A + L +L S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLESKR- 131
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFS 265
VH++ NVLV N K+ D G+S+ +E+ S G + + PE F+
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 266 EMSDIYSFGVFLLELV 281
SD++ FGV + E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 81 ELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEF--------VAEV 130
+++ K++ + +G G F VYK ++T +VAIK+ R E + E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 131 TYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLE-----SSTKLEFKQ 185
L E+ H N++ LL LVF+++ ET LE +S L
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM----------ETDLEVIIKDNSLVLTPSH 113
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ L +GL +LH ++H++ K N+L+DEN + K+AD G++K + A
Sbjct: 114 IKAYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY-X 170
Query: 246 HGSIVNVFRDPEVEESG-VFSEMSDIYSFGVFLLELV 281
H + +R PE+ ++ D+++ G L EL+
Sbjct: 171 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 95 IGFGSFGPVYKGLLRDTVVAI-------KRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
IG GSF VYKGL +T V + ++ S RQ F E L ++H N+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 148 CQQ--NGYQ--MLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
+ G + +LV E +G++ +T L+ + K S KGL LH+
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTL-----KTYLKRFKVXKIKVLRSWCRQILKGLQFLHTR 148
Query: 204 KPPLVHKNFKTANVLVD-ENFIAKVADTGISKLLENIEEAGPSHGSI-VNVFRDPEVEES 261
PP++H++ K N+ + K+ D G++ L + A + I F PE E
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXYEE 204
Query: 262 GVFSEMSDIYSFGVFLLELVTGQ 284
+ E D+Y+FG LE T +
Sbjct: 205 K-YDESVDVYAFGXCXLEXATSE 226
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 73 GARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT-----VVAIKR----RVGSPR 123
GA S + E ++ IG G FG V++G+ VAIK S R
Sbjct: 1 GAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 60
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY--ETGLESSTKL 181
++F+ E + + H ++V L+G +N ++ E G + + L + L+ ++ +
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLI 119
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
+ ++S AL +L S + VH++ NVLV N K+ D G+S+ +E+
Sbjct: 120 LYAYQLSTALA------YLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171
Query: 242 AGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELV 281
S G + + PE F+ SD++ FGV + E++
Sbjct: 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 71 PQGARQFS--MEELEQATKQFSETSLIGFGSFGPVYKGLLRDTV----VAIKRRVGSPRQ 124
P+ A Q S ++E + +Q LIG G FG VY G V + I+R +
Sbjct: 15 PRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLK 74
Query: 125 EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCN--HLYETGLESSTKLE 182
F EV + RH N+V +G C + ++ S+C LY ++ L+
Sbjct: 75 AFKREVMAYRQTRHENVVLFMGACMSPPHLAII------TSLCKGRTLYSVVRDAKIVLD 128
Query: 183 FKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTG---ISKLLE-- 237
+ IA KG+ +LH+ ++HK+ K+ NV D + + D G IS +L+
Sbjct: 129 VNKTRQIAQEIVKGMGYLHA--KGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAG 185
Query: 238 ------NIEEAGPSHGSIVNVFRD--PEVEESGV-FSEMSDIYSFGVFLLEL 280
I+ H + + R P+ EE + FS+ SD+++ G EL
Sbjct: 186 RREDKLRIQNGWLCHLA-PEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 5 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 56
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 57 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 111
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+A+ G S +
Sbjct: 112 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIANFGWS-----VHAPSSR 164
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 165 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 216
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 217 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 257
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 60
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + L + L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + +H + +R P
Sbjct: 119 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAP 173
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 65
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE+L + + + + L + L + L C
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFC 123
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + +H + +R PE+
Sbjct: 124 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 178
Query: 259 -EESGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE+L + + L + L C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + +H + +R PE+
Sbjct: 120 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 174
Query: 259 -EESGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE+L + + L + L C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + +H + +R PE+
Sbjct: 120 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 174
Query: 259 EE-SGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE+L + + L + L C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + +H + +R PE+
Sbjct: 119 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 173
Query: 259 EE-SGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKR-RV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK + T VVA+K+ R+ G P + E++ L E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE+L + + L + L C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + +H + +R PE+
Sbjct: 119 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 173
Query: 259 -EESGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 94/222 (42%), Gaps = 28/222 (12%)
Query: 70 GPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GS 121
GP G SME ++ K IG G++G VYK L VVA+K+ R+ G
Sbjct: 1 GPLG----SMENFQKVEK-------IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 49
Query: 122 PRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL 181
P + E++ L E+ H N+V LL LVFE+L + + L
Sbjct: 50 PSTA-IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPL 106
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
+ L CH H ++H++ K N+L++ K+AD G+++ +
Sbjct: 107 PLIKSYLFQLLQGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPV 161
Query: 242 AGPSHGSIVNVFRDPEV-EESGVFSEMSDIYSFGVFLLELVT 282
H + +R PE+ +S DI+S G E+VT
Sbjct: 162 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE+L + + L + L C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + +H + +R PE+
Sbjct: 120 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 174
Query: 259 -EESGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLR-DTVVAIKRRVGSP------RQEFVAEVTYLSEI-RHRNLV 142
+G G+FG V + GL++ D + + ++ P R+ ++E+ LS + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 143 TLLGYCQQNGYQMLVFEYLPNGSMCNHL---YETGLESSTK----------LEFKQRVSI 189
LLG C G +++ EY G + N L ++ + S T L+ + +S
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI 249
+ AKG+ L S +H++ N+L+ I K+ D G+++ ++N +
Sbjct: 167 SYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 250 VNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ V + PE + V++ SD++S+G+FL EL +
Sbjct: 225 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIK-------RRVGSPRQE 125
RQ+++E+ E +G G FG VY + + ++A+K + G Q
Sbjct: 6 RQWALEDFEIGRP-------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ- 57
Query: 126 FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
EV S +RH N++ L GY L+ EY P G++ L+ +K + ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE-----LQKLSKFDEQR 112
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
+ A L + HS + ++H++ K N+L+ K+A+ G S +
Sbjct: 113 TATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIANFGWS-----VHAPSSR 165
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEA-LIQWV 302
++ + PE+ E + E D++S GV E + G+ +EA Q
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--------FEANTYQET 217
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVM 350
R+S F F TEG RDLI L+ S +RP + V+
Sbjct: 218 YKRISRVEFT----FPDFVTEGARDLISRLLKHNPS---QRPMLREVL 258
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 81 ELEQATKQFSETSLIGFGSFGPVYKG----------LLRDTVVAIKRRVGSPRQE-FVAE 129
E + QF +T +G G+FG V + +L+ V +K + +E ++E
Sbjct: 42 EFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 130 VTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYET---GLESS------- 178
+ +S + +H N+V LLG C G +++ EY G + N L GLE S
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNP 159
Query: 179 -TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
+L + + + A+G+ L S +H++ NVL+ +AK+ D G+++ +
Sbjct: 160 EEQLSSRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIM 217
Query: 238 NIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
N + + V + PE V++ SD++S+G+ L E+ +
Sbjct: 218 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 59
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + + + + L + L + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASAL-TGIPLPLIKSYLFQLLQGLA 117
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 118 FCHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 172
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-----VVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
IG G FG V++G+ VAIK S R++F+ E + + H ++V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLY--ETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
G +N ++ E G + + L + L+ ++ + + ++S AL +L S
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA------YLESK 133
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGV 263
+ VH++ NVLV N K+ D G+S+ +E+ S G + + PE
Sbjct: 134 R--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 264 FSEMSDIYSFGVFLLELV 281
F+ SD++ FGV + E++
Sbjct: 192 FTSASDVWMFGVCMWEIL 209
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 62
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + + + + L + L + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASAL-TGIPLPLIKSYLFQLLQGLA 120
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 121 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 175
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 95 IGFGSFGPVYKGLLRD-----TVVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
IG G FG V++G+ VAIK S R++F+ E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLY--ETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
G +N ++ E G + + L + L+ ++ + + ++S AL +L S
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA------YLESK 130
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGV 263
+ VH++ NVLV N K+ D G+S+ +E+ S G + + PE
Sbjct: 131 R--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 264 FSEMSDIYSFGVFLLELV 281
F+ SD++ FGV + E++
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 61
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + + + + L + L + L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASAL-TGIPLPLIKSYLFQLLQGLA 119
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 120 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 174
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-----VVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
IG G FG V++G+ VAIK S R++F+ E + + H ++V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLY--ETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
G +N ++ E G + + L + L+ ++ + + ++S AL +L S
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA------YLESK 132
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGV 263
+ VH++ NVLV N K+ D G+S+ +E+ S G + + PE
Sbjct: 133 R--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 190
Query: 264 FSEMSDIYSFGVFLLELV 281
F+ SD++ FGV + E++
Sbjct: 191 FTSASDVWMFGVCMWEIL 208
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE+L + + L + L C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + +H + +R PE+
Sbjct: 120 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 174
Query: 259 EE-SGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 81 ELEQATKQFSETSLIGFGSFGPVYKG----------LLRDTVVAIKRRVGSPRQE-FVAE 129
E + QF +T +G G+FG V + +L+ V +K + +E ++E
Sbjct: 27 EFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 84
Query: 130 VTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYET--------------- 173
+ +S + +H N+V LLG C G +++ EY G + N L
Sbjct: 85 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDP 144
Query: 174 -GL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADT 230
GL E LE + + + A+G+ L S +H++ NVL+ +AK+ D
Sbjct: 145 EGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDF 202
Query: 231 GISKLLENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
G+++ + N + + V + PE V++ SD++S+G+ L E+ +
Sbjct: 203 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-----VVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
IG G FG V++G+ VAIK S R++F+ E + + H ++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLY--ETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
G +N ++ E G + + L + L+ ++ + + ++S AL +L S
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA------YLESK 127
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGV 263
+ VH++ NVLV N K+ D G+S+ +E+ S G + + PE
Sbjct: 128 R--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 264 FSEMSDIYSFGVFLLELV 281
F+ SD++ FGV + E++
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-----VVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
IG G FG V++G+ VAIK S R++F+ E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLY--ETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
G +N ++ E G + + L + L+ ++ + + ++S AL +L S
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA------YLESK 130
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGV 263
+ VH++ NVLV N K+ D G+S+ +E+ S G + + PE
Sbjct: 131 R--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 264 FSEMSDIYSFGVFLLELV 281
F+ SD++ FGV + E++
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 59
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + L + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 118 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 172
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLR-DTVVAIKRRVGSP------RQEFVAEVTYLSEI-RHRNLV 142
+G G+FG V + GL++ D + + ++ P R+ ++E+ LS + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 143 TLLGYCQQNGYQMLVFEYLPNGSMCNHL---YETGLESSTK----------LEFKQRVSI 189
LLG C G +++ EY G + N L ++ + S T L+ + +S
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI 249
+ AKG+ L S +H++ N+L+ I K+ D G+++ ++N +
Sbjct: 151 SYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 250 VNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ V + PE + V++ SD++S+G+FL EL +
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLR-DTVVAIKRRVGSP------RQEFVAEVTYLSEI-RHRNLV 142
+G G+FG V + GL++ D + + ++ P R+ ++E+ LS + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 143 TLLGYCQQNGYQMLVFEYLPNGSMCNHL---YETGLESSTK----------LEFKQRVSI 189
LLG C G +++ EY G + N L ++ + S T L+ + +S
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI 249
+ AKG+ L S +H++ N+L+ I K+ D G+++ ++N +
Sbjct: 169 SYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 250 VNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ V + PE + V++ SD++S+G+FL EL +
Sbjct: 227 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 62
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + L + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 121 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 175
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLR-DTVVAIKRRVGSP------RQEFVAEVTYLSEI-RHRNLV 142
+G G+FG V + GL++ D + + ++ P R+ ++E+ LS + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 143 TLLGYCQQNGYQMLVFEYLPNGSMCNHL---YETGLESSTK----------LEFKQRVSI 189
LLG C G +++ EY G + N L ++ + S T L+ + +S
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI 249
+ AKG+ L S +H++ N+L+ I K+ D G+++ ++N +
Sbjct: 174 SYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 250 VNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ V + PE + V++ SD++S+G+FL EL +
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 60
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + L + L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 119 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 173
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 59
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + L + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 118 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 172
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 61
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + L + L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 120 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 174
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 62
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + L + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 121 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 175
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 61
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + L + L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 120 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 174
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 60
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSM-CNHLYETGLESSTKLEFKQRVSIALGAAK 195
H N+V LL LVFE+L SM + + L + L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
CH H ++H++ K N+L++ K+AD G+++ + H + +R
Sbjct: 118 AFCHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRA 172
Query: 256 PEV-EESGVFSEMSDIYSFGVFLLELVT 282
PE+ +S DI+S G E+VT
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 59
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + L + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 118 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 172
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 62
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSM-CNHLYETGLESSTKLEFKQRVSIALGAAK 195
H N+V LL LVFE+L SM + + L + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
CH H ++H++ K N+L++ K+AD G+++ + H + +R
Sbjct: 120 AFCHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRA 174
Query: 256 PEV-EESGVFSEMSDIYSFGVFLLELVT 282
PE+ +S DI+S G E+VT
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKR-RV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK + T VVA+K+ R+ G P + E++ L E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE+L + + L + L C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + H + +R PE+
Sbjct: 119 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 173
Query: 259 EE-SGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK + T VVA+K+ R+ G P + E++ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 59
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + L + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 118 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 172
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 62
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + + + L + L + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASAL-TGIPLPLIKSYLFQLLQGLA 120
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 121 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 175
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 28/214 (13%)
Query: 95 IGFGSFGPVYK----GLLR-DTVVAIKRRVGSP------RQEFVAEVTYLSEI-RHRNLV 142
+G G+FG V + GL++ D + + ++ P R+ ++E+ LS + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 143 TLLGYCQQNGYQMLVFEYLPNGSMCNHL---YETGLESSTK----------LEFKQRVSI 189
LLG C G +++ EY G + N L ++ + S T L+ + +S
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI 249
+ AKG+ L S +H++ N+L+ I K+ D G+++ ++N +
Sbjct: 174 SYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 250 VNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ V + PE + V++ SD++S+G+FL EL +
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 60
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + L + L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 119 FCHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 173
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 61
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE+L + + L + L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 120 FCHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 174
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE+L + + L + L C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + H + +R PE+
Sbjct: 119 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 173
Query: 259 -EESGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 62
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE+L + + L + L C
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + H + +R PE+
Sbjct: 121 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 175
Query: 259 -EESGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 95 IGFGSFGPVYKGLLRD-----TVVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
IG G FG V++G+ VAIK S R++F+ E + + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
G +N ++ E G + + L L+ + A + L +L S +
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKF----SLDLASLILYAYQLSTALAYLESKR- 511
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFS 265
VH++ NVLV N K+ D G+S+ +E+ S G + + PE F+
Sbjct: 512 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 266 EMSDIYSFGVFLLELV 281
SD++ FGV + E++
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 82 LEQATKQFSETSLIGFGSFG-----------PVYKGLLRDTVVAIKRRVGSPRQEFVAEV 130
L+ + + +IG G+FG VY L IKR S F E
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKR---SDSAFFWEER 126
Query: 131 TYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIA 190
++ +V L Q + Y +V EY+P G + N + + + V +A
Sbjct: 127 DIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLA 186
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L A +HS+ L+H++ K N+L+D++ K+AD G ++E G H
Sbjct: 187 LDA------IHSMG--LIHRDVKPDNMLLDKHGHLKLADFGTCM---KMDETGMVHCDTA 235
Query: 251 NVFRD---PEVEES----GVFSEMSDIYSFGVFLLELVTGQEASHIVSL-GSYEALIQ 300
D PEV +S G + D +S GVFL E++ G + SL G+Y ++
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD 293
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKG---LLRDTVVAIKRRV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK L + V K R+ G P + E++ L E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE+L + + L + L C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + +H + +R PE+
Sbjct: 120 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 174
Query: 259 -EESGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKG---LLRDTVVAIKRRV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK L + V K R+ G P + E++ L E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE+L + + L + L C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + +H + +R PE+
Sbjct: 119 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 173
Query: 259 -EESGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 95 IGFGSFGPVYKGL--LRDTVVAIK-----RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++ VYKG L D +VA+K G+P + EV+ L +++H N+VTL
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTA-IREVSLLKDLKHANIVTLHDI 68
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPL 207
LVFEYL + + +L + G + +GL + H K +
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHRQK--V 121
Query: 208 VHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV-EESGVFSE 266
+H++ K N+L++E K+AD G+++ ++I + + +R P++ S +S
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLWYRPPDILLGSTDYST 180
Query: 267 MSDIYSFGVFLLELVTGQ 284
D++ G E+ TG+
Sbjct: 181 QIDMWGVGCIFYEMATGR 198
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 26/224 (11%)
Query: 81 ELEQATKQFSETSLIGFGSFGPVYKG----------LLRDTVVAIKRRVGSPRQE-FVAE 129
E + QF +T +G G+FG V + +L+ V +K + +E ++E
Sbjct: 42 EFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 130 VTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETG--LES-------ST 179
+ +S + +H N+V LLG C G +++ EY G + N L LE+ ++
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 180 KLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENI 239
L + + + A+G+ L S +H++ NVL+ +AK+ D G+++ + N
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 240 EEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + V + PE V++ SD++S+G+ L E+ +
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 27/202 (13%)
Query: 95 IGFGSFGPVYKGL--LRDTVVAIKRRV-----GSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
IG G++G VYK +T K R+ G P + E++ L E++H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDV 68
Query: 148 CQQNGYQMLVFEYLPNG-----SMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
+LVFE+L +C E GLES T F L G+ + H
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVC----EGGLESVTAKSF------LLQLLNGIAYCHD 118
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV-EES 261
+ ++H++ K N+L++ K+AD G+++ I +H + +R P+V S
Sbjct: 119 RR--VLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 262 GVFSEMSDIYSFGVFLLELVTG 283
+S DI+S G E+V G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 27/202 (13%)
Query: 95 IGFGSFGPVYKGL--LRDTVVAIKRRV-----GSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
IG G++G VYK +T K R+ G P + E++ L E++H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDV 68
Query: 148 CQQNGYQMLVFEYLPNG-----SMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
+LVFE+L +C E GLES T F L G+ + H
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVC----EGGLESVTAKSF------LLQLLNGIAYCHD 118
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV-EES 261
+ ++H++ K N+L++ K+AD G+++ I +H + +R P+V S
Sbjct: 119 RR--VLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 262 GVFSEMSDIYSFGVFLLELVTG 283
+S DI+S G E+V G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 27/202 (13%)
Query: 95 IGFGSFGPVYKGL--LRDTVVAIKRRV-----GSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
IG G++G VYK +T K R+ G P + E++ L E++H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDV 68
Query: 148 CQQNGYQMLVFEYLPNG-----SMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
+LVFE+L +C E GLES T F L G+ + H
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVC----EGGLESVTAKSF------LLQLLNGIAYCHD 118
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV-EES 261
+ ++H++ K N+L++ K+AD G+++ I +H + +R P+V S
Sbjct: 119 RR--VLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 262 GVFSEMSDIYSFGVFLLELVTG 283
+S DI+S G E+V G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEIRH 138
+ F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V LL LVFE++ + + + + L + L + L C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASAL-TGIPLPLIKSYLFQLLQGLAFC 118
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
H H ++H++ K N+L++ K+AD G+++ + +H + +R PE+
Sbjct: 119 HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 173
Query: 259 -EESGVFSEMSDIYSFGVFLLELVT 282
+S DI+S G E+VT
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGL--LRDTVVAIKR-RV-----GSPRQEFVAEVTYLSEI 136
+ + F + IG G++G VYK L VVA+K+ R+ G P + E++ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 62
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H N+V LL LVFE++ + + L + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
CH H ++H++ K N+L++ K+AD G+++ + H + +R P
Sbjct: 121 FCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAP 175
Query: 257 EV-EESGVFSEMSDIYSFGVFLLELVT 282
E+ +S DI+S G E+VT
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 95 IGFGSFGPVYKGLL-----RDTVVAIK----RRVGSPR--QEFVAEVTYLSEIRHRNLVT 143
+G GSFG V +G + VA+K + P +F+ EV + + HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
L G +M V E P GS+ + L + A+ A+G+ +L S
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLESK 140
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE--AGPSHGSIVNVFRDPEVEES 261
+ +H++ N+L+ + K+ D G+ + L ++ H + + PE ++
Sbjct: 141 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 262 GVFSEMSDIYSFGVFLLELVT-GQE 285
FS SD + FGV L E+ T GQE
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQE 223
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 120/305 (39%), Gaps = 36/305 (11%)
Query: 67 PSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKG--LLRDTVVAIKR------R 118
P F PQ A + M F IG G F VY+ LL VA+K+
Sbjct: 14 PQFQPQKALRPDMGY--NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLM 71
Query: 119 VGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGS---MCNHLYETGL 175
R + + E+ L ++ H N++ ++ +V E G M H +
Sbjct: 72 DAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKR 131
Query: 176 ESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKL 235
+ +K V + L H+HS + ++H++ K ANV + + K+ D G+ +
Sbjct: 132 LIPERTVWKYFVQLC----SALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRF 185
Query: 236 LENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSY 295
+ A S + E+G ++ SDI+S G L E+ Q + + Y
Sbjct: 186 FSSKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 244
Query: 296 ---EALIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTE 352
+ + Q L S+++ +E +R L+ + C++ +RP + V
Sbjct: 245 SLCKKIEQCDYPPLPSDHY----------SEELRQLVNM---CINPDPEKRPDVTYVYDV 291
Query: 353 LERIH 357
+R+H
Sbjct: 292 AKRMH 296
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 95 IGFGSFGPVYKGLL-----RDTVVAIK----RRVGSPR--QEFVAEVTYLSEIRHRNLVT 143
+G GSFG V +G + VA+K + P +F+ EV + + HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
L G +M V E P GS+ + L + A+ A+G+ +L S
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLESK 134
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE--AGPSHGSIVNVFRDPEVEES 261
+ +H++ N+L+ + K+ D G+ + L ++ H + + PE ++
Sbjct: 135 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 262 GVFSEMSDIYSFGVFLLELVT-GQE 285
FS SD + FGV L E+ T GQE
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQE 217
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 95 IGFGSFGPVYKGLL-----RDTVVAIK----RRVGSPR--QEFVAEVTYLSEIRHRNLVT 143
+G GSFG V +G + VA+K + P +F+ EV + + HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
L G +M V E P GS+ + L + A+ A+G+ +L S
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLESK 140
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE--AGPSHGSIVNVFRDPEVEES 261
+ +H++ N+L+ + K+ D G+ + L ++ H + + PE ++
Sbjct: 141 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 262 GVFSEMSDIYSFGVFLLELVT-GQE 285
FS SD + FGV L E+ T GQE
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQE 223
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 27/225 (12%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEI--RHRNLVTL 144
+Q + +G G +G V++G + VA+K + + E + + RH N++
Sbjct: 37 RQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 96
Query: 145 LG---YCQQNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHL 200
+ + + Q+ L+ Y GS+ ++L T L++ + L I L A GL HL
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR------IVLSIASGLAHL 150
Query: 201 H------SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE---NIEEAGPSHGSIVN 251
H KP + H++ K+ N+LV +N +AD G++ + N + G +
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 210
Query: 252 VFRDPEVEESGVFSEM------SDIYSFGVFLLELVTGQEASHIV 290
+ PEV + + + DI++FG+ L E+ ++ IV
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 255
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 26/224 (11%)
Query: 81 ELEQATKQFSETSLIGFGSFGPVYKG----------LLRDTVVAIKRRVGSPRQE-FVAE 129
E + QF +T +G G+FG V + +L+ V +K + +E ++E
Sbjct: 42 EFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 130 VTYLSEI-RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEF----- 183
+ +S + +H N+V LLG C G +++ EY G + N L T F
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 184 ----KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENI 239
+ + + A+G+ L S +H++ NVL+ +AK+ D G+++ + N
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 240 EEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + V + PE V++ SD++S+G+ L E+ +
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 95 IGFGSFGPVYKGLL-----RDTVVAIK----RRVGSPR--QEFVAEVTYLSEIRHRNLVT 143
+G GSFG V +G + VA+K + P +F+ EV + + HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
L G +M V E P GS+ + L + A+ A+G+ +L S
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLESK 134
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE--AGPSHGSIVNVFRDPEVEES 261
+ +H++ N+L+ + K+ D G+ + L ++ H + + PE ++
Sbjct: 135 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 262 GVFSEMSDIYSFGVFLLELVT-GQE 285
FS SD + FGV L E+ T GQE
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQE 217
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 95 IGFGSFGPVYKGLL-----RDTVVAIK----RRVGSPR--QEFVAEVTYLSEIRHRNLVT 143
+G GSFG V +G + VA+K + P +F+ EV + + HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
L G +M V E P GS+ + L + A+ A+G+ +L S
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE--AGPSHGSIVNVFRDPEVEES 261
+ +H++ N+L+ + K+ D G+ + L ++ H + + PE ++
Sbjct: 131 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 262 GVFSEMSDIYSFGVFLLELVT-GQE 285
FS SD + FGV L E+ T GQE
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQE 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 95 IGFGSFGPVYKGLL-----RDTVVAIK----RRVGSPR--QEFVAEVTYLSEIRHRNLVT 143
+G GSFG V +G + VA+K + P +F+ EV + + HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
L G +M V E P GS+ + L + A+ A+G+ +L S
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE--AGPSHGSIVNVFRDPEVEES 261
+ +H++ N+L+ + K+ D G+ + L ++ H + + PE ++
Sbjct: 131 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 262 GVFSEMSDIYSFGVFLLELVT-GQE 285
FS SD + FGV L E+ T GQE
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQE 213
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 95 IGFGSFGPVYKGLLRD-----TVVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
IG G FG V++G+ VAIK S R++F+ E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
G +N ++ E G + + L L+ + A + L +L S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLESKR- 131
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFS 265
VH++ NVLV K+ D G+S+ +E+ S G + + PE F+
Sbjct: 132 -FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 266 EMSDIYSFGVFLLELV 281
SD++ FGV + E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 95 IGFGSFGPVYKGLL-----RDTVVAIK----RRVGSPR--QEFVAEVTYLSEIRHRNLVT 143
+G GSFG V +G + VA+K + P +F+ EV + + HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
L G +M V E P GS+ + L + A+ A+G+ +L S
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 204 KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE--AGPSHGSIVNVFRDPEVEES 261
+ +H++ N+L+ + K+ D G+ + L ++ H + + PE ++
Sbjct: 131 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 262 GVFSEMSDIYSFGVFLLELVT-GQE 285
FS SD + FGV L E+ T GQE
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQE 213
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 100/221 (45%), Gaps = 21/221 (9%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRD--------TVVAIKRRVG-S 121
P+G+ Q+ + A + ++G G FG VY+G+ + V K+
Sbjct: 13 PRGSPQYGI-----AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD 67
Query: 122 PRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL 181
+++F++E + + H ++V L+G ++ ++ E P G + ++L + L
Sbjct: 68 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLER----NKNSL 122
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
+ V +L K + +L S+ VH++ N+LV K+ D G+S+ +E+ +
Sbjct: 123 KVLTLVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 180
Query: 242 AGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
S + + PE F+ SD++ F V + E+++
Sbjct: 181 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFVA-----EVTYLSEIRHR 139
+++ + IG G++G V+K R+T +VA+KR E V E+ L E++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESST-KLEFKQRVSIALGAAKGLC 198
N+V L + LVFE+ C+ + +S L+ + S KGL
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEF------CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
HS ++H++ K N+L++ N K+AD G+++ I S + +R P+V
Sbjct: 116 FCHSRN--VLHRDLKPQNLLINRNGELKLADFGLARAF-GIPVRCYSAEVVTLWYRPPDV 172
Query: 259 E-ESGVFSEMSDIYSFGVFLLELVTG 283
+ ++S D++S G EL
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANA 198
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 95 IGFGSFGPVYKGLLRD-----TVVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
IG G FG V++G+ VAIK S R++F+ E + + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
G +N ++ E G + + L L+ + A + L +L S +
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKF----SLDLASLILYAYQLSTALAYLESKR- 511
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFS 265
VH++ NVLV K+ D G+S+ +E+ S G + + PE F+
Sbjct: 512 -FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 266 EMSDIYSFGVFLLELV 281
SD++ FGV + E++
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 27/224 (12%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEI--RHRNLVTLL 145
Q + +G G +G V++G + VA+K + + E + + RH N++ +
Sbjct: 9 QITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFI 68
Query: 146 G---YCQQNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + Q+ L+ Y GS+ ++L T L++ + L I L A GL HLH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR------IVLSIASGLAHLH 122
Query: 202 ------SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE---NIEEAGPSHGSIVNV 252
KP + H++ K+ N+LV +N +AD G++ + N + G +
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 253 FRDPEVEESGVFSEM------SDIYSFGVFLLELVTGQEASHIV 290
+ PEV + + + DI++FG+ L E+ ++ IV
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYCQQ-NGYQMLVFEYLPNGSMCNHL-------- 170
S + ++E+ L I H N+V LLG C + G M++ E+ G++ +L
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 122
Query: 171 -YETGLESSTK--LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
Y+ E K L + + + AKG+ L S K +H++ N+L+ E + K+
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKI 180
Query: 228 ADTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
D G+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHL-------- 170
S + ++E+ L I H N+V LLG C + G M++ E+ G++ +L
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Query: 171 -YETGLESSTK--LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
Y+ E K L + + + AKG+ L S K +H++ N+L+ E + K+
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKI 189
Query: 228 ADTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
D G+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 190 CDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 95 IGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEI--RHRNLVTLLG---YCQ 149
+G G +G V++G + VA+K + + E + + RH N++ + +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 150 QNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH------S 202
+ Q+ L+ Y GS+ ++L T L++ + L I L A GL HLH
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR------IVLSIASGLAHLHIEIFGTQ 129
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE---NIEEAGPSHGSIVNVFRDPEVE 259
KP + H++ K+ N+LV +N +AD G++ + N + G + + PEV
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 260 ESGVFSEM------SDIYSFGVFLLELVTGQEASHIV 290
+ + + DI++FG+ L E+ ++ IV
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVA 114
G+ ++ P GP ++ S +++T +IG GSFG VY+ L D+ +VA
Sbjct: 19 GSKVTTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVA 68
Query: 115 IKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCN 168
IK+ + R + E+ + ++ H N+V L + +G Y LV +Y+P
Sbjct: 69 IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET---- 123
Query: 169 HLYETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFI 224
+Y S + + + L + L ++HS + H++ K N+L+D + +
Sbjct: 124 -VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAV 180
Query: 225 AKVADTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVT 282
K+ D G +K L E P+ I + +R PE+ ++ D++S G L EL+
Sbjct: 181 LKLCDFGSAKQLVRGE---PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 237
Query: 283 GQ 284
GQ
Sbjct: 238 GQ 239
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSP--RQEFVAEVTYLSEIRHRNLVTL---- 144
+G G FG V + + +DT VAIK R+ SP R+ + E+ + ++ H N+V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 145 --LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
L N +L EY G + +L + E+ L+ ++ + L +LH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ--FENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 203 LKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVE 259
+ ++H++ K N+++ + I K+ D G +K L+ E G++ + PE+
Sbjct: 140 NR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQ--YLAPELL 195
Query: 260 ESGVFSEMSDIYSFGVFLLELVTG 283
E ++ D +SFG E +TG
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVA 114
G+ ++ P GP ++ S +++T +IG GSFG VY+ L D+ +VA
Sbjct: 4 GSKVTTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVA 53
Query: 115 IKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCN 168
IK+ + R + E+ + ++ H N+V L + +G Y LV +Y+P
Sbjct: 54 IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET---- 108
Query: 169 HLYETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFI 224
+Y S + + + L + L ++HS + H++ K N+L+D + +
Sbjct: 109 -VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAV 165
Query: 225 AKVADTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVT 282
K+ D G +K L E P+ I + +R PE+ ++ D++S G L EL+
Sbjct: 166 LKLCDFGSAKQLVRGE---PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 222
Query: 283 GQ 284
GQ
Sbjct: 223 GQ 224
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHL-------- 170
S + ++E+ L I H N+V LLG C + G M++ E+ G++ +L
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Query: 171 -YETGLESSTK--LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
Y+ E K L + + + AKG+ L S K +H++ N+L+ E + K+
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKI 189
Query: 228 ADTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
D G+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 190 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVA 114
G+ ++ P GP ++ S +++T +IG GSFG VY+ L D+ +VA
Sbjct: 34 GSKVTTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVA 83
Query: 115 IKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCN 168
IK+ + R + E+ + ++ H N+V L + +G Y LV +Y+P
Sbjct: 84 IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET---- 138
Query: 169 HLYETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFI 224
+Y S + + + L + L ++HS + H++ K N+L+D + +
Sbjct: 139 -VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAV 195
Query: 225 AKVADTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVT 282
K+ D G +K L E P+ I + +R PE+ ++ D++S G L EL+
Sbjct: 196 LKLCDFGSAKQLVRGE---PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 252
Query: 283 GQ 284
GQ
Sbjct: 253 GQ 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVA 114
G+ ++ P GP ++ S +++T +IG GSFG VY+ L D+ +VA
Sbjct: 8 GSKVTTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVA 57
Query: 115 IKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCN 168
IK+ + R + E+ + ++ H N+V L + +G Y LV +Y+P
Sbjct: 58 IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET---- 112
Query: 169 HLYETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFI 224
+Y S + + + L + L ++HS + H++ K N+L+D + +
Sbjct: 113 -VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAV 169
Query: 225 AKVADTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVT 282
K+ D G +K L E P+ I + +R PE+ ++ D++S G L EL+
Sbjct: 170 LKLCDFGSAKQLVRGE---PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 226
Query: 283 GQ 284
GQ
Sbjct: 227 GQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVA 114
G+ ++ P GP ++ S +++T +IG GSFG VY+ L D+ +VA
Sbjct: 12 GSKVTTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVA 61
Query: 115 IKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCN 168
IK+ + R + E+ + ++ H N+V L + +G Y LV +Y+P
Sbjct: 62 IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET---- 116
Query: 169 HLYETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFI 224
+Y S + + + L + L ++HS + H++ K N+L+D + +
Sbjct: 117 -VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAV 173
Query: 225 AKVADTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVT 282
K+ D G +K L E P+ I + +R PE+ ++ D++S G L EL+
Sbjct: 174 LKLCDFGSAKQLVRGE---PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 230
Query: 283 GQ 284
GQ
Sbjct: 231 GQ 232
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK--RRVGSP--RQEFVAEVTYLSEIRHRNLVTL---- 144
+G G FG V + + +DT VAIK R+ SP R+ + E+ + ++ H N+V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 145 --LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
L N +L EY G + +L + E+ L+ ++ + L +LH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ--FENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 203 LKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVE 259
+ ++H++ K N+++ + I K+ D G +K L+ E G++ + PE+
Sbjct: 141 NR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQ--YLAPELL 196
Query: 260 ESGVFSEMSDIYSFGVFLLELVTG 283
E ++ D +SFG E +TG
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVA 114
G+ ++ P GP ++ S +++T +IG GSFG VY+ L D+ +VA
Sbjct: 12 GSKVTTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVA 61
Query: 115 IKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCN 168
IK+ + R + E+ + ++ H N+V L + +G Y LV +Y+P
Sbjct: 62 IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET---- 116
Query: 169 HLYETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFI 224
+Y S + + + L + L ++HS + H++ K N+L+D + +
Sbjct: 117 -VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAV 173
Query: 225 AKVADTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVT 282
K+ D G +K L E P+ I + +R PE+ ++ D++S G L EL+
Sbjct: 174 LKLCDFGSAKQLVRGE---PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 230
Query: 283 GQ 284
GQ
Sbjct: 231 GQ 232
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 95 IGFGSFGPVYKGLLRDT-----VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
+G G+FG VYK ++T I+ + ++++ E+ L+ H +V LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+G ++ E+ P G++ + LE L Q + + L LHS + ++H
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIM----LELDRGLTEPQIQVVCRQMLEALNFLHSKR--IIH 140
Query: 210 KNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSHGSIVNVFRDPEV-----EESGV 263
++ K NVL+ ++AD G+S K L+ +++ G+ + PEV +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGT--PYWMAPEVVMCETMKDTP 198
Query: 264 FSEMSDIYSFGVFLLELVTGQEASH 288
+ +DI+S G+ L+E+ + H
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPPHH 223
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 124/302 (41%), Gaps = 53/302 (17%)
Query: 63 ATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTV--------VA 114
++G+ + QG F + ++ ++G GSFG V L +D + V
Sbjct: 8 SSGRENLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVI 65
Query: 115 IKRRVG--SPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYE 172
KR+V + ++ + EV L ++ H N++ L + + GY LV E G + + +
Sbjct: 66 SKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII- 124
Query: 173 TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVD---ENFIAKVAD 229
S + I G+ ++H K +VH++ K N+L++ ++ ++ D
Sbjct: 125 ----SRKRFSEVDAARIIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIID 178
Query: 230 TGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG------ 283
G+S E ++ G+ + PEV G + E D++S GV L L++G
Sbjct: 179 FGLSTHFEASKKMKDKIGTAYYI--APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNG 235
Query: 284 ---QEASHIVSLGSYE-ALIQWVR------------------SRLSSNNFVDHRLAGTFT 321
+ V G Y L QW + R+S+ + +DH T+T
Sbjct: 236 ANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT 295
Query: 322 TE 323
E
Sbjct: 296 KE 297
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHL-------- 170
S + ++E+ L I H N+V LLG C + G M++ E+ G++ +L
Sbjct: 109 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 168
Query: 171 -YETGLESSTK--LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
Y+ E K L + + + AKG+ L S K +H++ N+L+ E + K+
Sbjct: 169 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKI 226
Query: 228 ADTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
D G+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVF-EYLPNGSMCNHL-------- 170
S + ++E+ L I H N+V LLG C + G ++V E+ G++ +L
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV 122
Query: 171 -YETGLESSTK--LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
Y+ E K L + + + AKG+ L S K +H++ N+L+ E + K+
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKI 180
Query: 228 ADTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
D G+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHL-------- 170
S + ++E+ L I H N+V LLG C + G M++ E+ G++ +L
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Query: 171 -YETGLESSTK--LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
Y+ E K L + + + AKG+ L S K +H++ N+L+ E + K+
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKI 189
Query: 228 ADTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
D G+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 95 IGFGSFGPVYKGLLRDT-----VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
+G G+FG VYK ++T I+ + ++++ E+ L+ H +V LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+G ++ E+ P G++ + LE L Q + + L LHS + ++H
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIM----LELDRGLTEPQIQVVCRQMLEALNFLHSKR--IIH 132
Query: 210 KNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSHGSIVNVFRDPEV-----EESGV 263
++ K NVL+ ++AD G+S K L+ +++ G+ + PEV +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGT--PYWMAPEVVMCETMKDTP 190
Query: 264 FSEMSDIYSFGVFLLELVTGQEASH 288
+ +DI+S G+ L+E+ + H
Sbjct: 191 YDYKADIWSLGITLIEMAQIEPPHH 215
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVA 114
G+ ++ P GP ++ S +++T +IG GSFG VY+ L D+ +VA
Sbjct: 13 GSKVTTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVA 62
Query: 115 IKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCN 168
IK+ + R + E+ + ++ H N+V L + +G Y LV +Y+P
Sbjct: 63 IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET---- 117
Query: 169 HLYETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFI 224
+Y S + + + L + L ++HS + H++ K N+L+D + +
Sbjct: 118 -VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAV 174
Query: 225 AKVADTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVT 282
K+ D G +K L E P+ I + +R PE+ ++ D++S G L EL+
Sbjct: 175 LKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 231
Query: 283 GQ 284
GQ
Sbjct: 232 GQ 233
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 36/309 (11%)
Query: 68 SFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRD-----TVVAIKRR---- 118
S G + +E++ +QF+ ++G G FG V + L+ VA+K
Sbjct: 4 SLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADI 63
Query: 119 -VGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQ------MLVFEYLPNGSMCNHLY 171
S +EF+ E + E H ++ L+G ++ + M++ ++ +G + L
Sbjct: 64 IASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL 123
Query: 172 ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADT 230
+ + E+ L + V + A G+ +L S +H++ N ++ E+ VAD
Sbjct: 124 ASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADF 181
Query: 231 GISKLLENIEEAGPSHGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH- 288
G+S+ + + + S + V + E +++ SD+++FGV + E++T + +
Sbjct: 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA 241
Query: 289 -IVSLGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKME 347
I + Y LI R + E M ++ L QC S+ ++RP
Sbjct: 242 GIENAEIYNYLIGGNRLKQPP--------------ECMEEVYDLMYQCWSADPKQRPSFT 287
Query: 348 IVMTELERI 356
+ ELE I
Sbjct: 288 CLRMELENI 296
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 35/242 (14%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVA 114
G+ ++ P GP ++ S +++T +IG GSFG VY+ L D+ +VA
Sbjct: 28 GSKVTTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVA 77
Query: 115 IKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCN 168
IK+ + R + E+ + ++ H N+V L + +G Y LV +Y+P
Sbjct: 78 IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET---- 132
Query: 169 HLYETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFI 224
+Y S + + + L + L ++HS + H++ K N+L+D + +
Sbjct: 133 -VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAV 189
Query: 225 AKVADTGISKLLENIEEAGPSHGSIVN-VFRDPE-VEESGVFSEMSDIYSFGVFLLELVT 282
K+ D G +K L E P+ I + +R PE + + ++ D++S G L EL+
Sbjct: 190 LKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 246
Query: 283 GQ 284
GQ
Sbjct: 247 GQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVA 114
G+ ++ P GP ++ S +++T +IG GSFG VY+ L D+ +VA
Sbjct: 34 GSKVTTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVA 83
Query: 115 IKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCN 168
IK+ + R + E+ + ++ H N+V L + +G Y LV +Y+P
Sbjct: 84 IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET---- 138
Query: 169 HLYETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFI 224
+Y S + + + L + L ++HS + H++ K N+L+D + +
Sbjct: 139 -VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAV 195
Query: 225 AKVADTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVT 282
K+ D G +K L E P+ I + +R PE+ ++ D++S G L EL+
Sbjct: 196 LKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 252
Query: 283 GQ 284
GQ
Sbjct: 253 GQ 254
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 121/297 (40%), Gaps = 49/297 (16%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S++ H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 202 SLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+H++ N L+ +AK+ D G+++ + +++ V + PE
Sbjct: 173 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
G+F+ +D +SFGV L E I SLG ++ SN V
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWE---------IFSLG-------YMPYPSKSNQEVLE--- 271
Query: 318 GTFTTEGMR---------DLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
F T G R + R+ QC RP I++ +E + + T
Sbjct: 272 --FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 326
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVF-EYLPNGSMCNHL-------- 170
S + ++E+ L I H N+V LLG C + G ++V E+ G++ +L
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV 122
Query: 171 -YETGLESSTK--LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
Y+ E K L + + + AKG+ L S K +H++ N+L+ E + K+
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKI 180
Query: 228 ADTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
D G+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 123/295 (41%), Gaps = 45/295 (15%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S++ H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 202 SLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+H++ N L+ +AK+ D G+++ + +++ V + PE
Sbjct: 159 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLG-------SYEALIQWVRSRLSSNN 310
G+F+ +D +SFGV L E I SLG S + ++++V S
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWE---------IFSLGYMPYPSKSNQEVLEFVTS------ 261
Query: 311 FVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
R+ G + R+ QC RP I++ +E + + T
Sbjct: 262 --GGRMDPPKNCPG--PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 312
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVA 114
G+ ++ P GP ++ S +++T +IG GSFG VY+ L D+ +VA
Sbjct: 79 GSKVTTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVA 128
Query: 115 IKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCN 168
IK+ + R + E+ + ++ H N+V L + +G Y LV +Y+P
Sbjct: 129 IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET---- 183
Query: 169 HLYETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFI 224
+Y S + + + L + L ++HS + H++ K N+L+D + +
Sbjct: 184 -VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAV 240
Query: 225 AKVADTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVT 282
K+ D G +K L E P+ I + +R PE+ ++ D++S G L EL+
Sbjct: 241 LKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 297
Query: 283 GQ 284
GQ
Sbjct: 298 GQ 299
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 95 IGFGSFGPVYKGL--LRDTVVAIK----------RRVGSPRQEFVAEVTYLSEIRHRNLV 142
+G G+FG V G L VA+K VG R+E + L RH +++
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRRE----IQNLKLFRHPHII 79
Query: 143 TLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHL 200
L +V EY+ G + +++ + G E ++ F+Q +S CH
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS-----GVDYCHR 134
Query: 201 HSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEE 260
H + VH++ K NVL+D + AK+AD G+S ++ + E S GS + PEV
Sbjct: 135 HMV----VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGS--PNYAAPEVIS 188
Query: 261 SGVFS-EMSDIYSFGVFLLELVTGQ---EASHIVSL 292
+++ DI+S GV L L+ G + H+ +L
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL 224
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYCQQNGYQMLVF-EYLPNGSMCNHL-------- 170
S + ++E+ L I H N+V LLG C + G ++V E+ G++ +L
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV 122
Query: 171 -YETGLESSTK--LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
Y+ E K L + + + AKG+ L S K +H++ N+L+ E + K+
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKI 180
Query: 228 ADTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
D G+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 58/255 (22%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQE-----FVAEVTYLSEIRHRN 140
++ + + IG G+FG V+K R T VA+K+ + +E + E+ L ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 141 LVTLLGYCQQN--------GYQMLVFEYLPNGSMCNH----LYETGLESSTKLEFKQRVS 188
+V L+ C+ G LVF++ C H L L T E K+ +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDF------CEHDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 189 IALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH-- 246
+ L GL ++H K ++H++ K ANVL+ + + K+AD G+++ + + P+
Sbjct: 133 MLLN---GLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 247 GSIVNV-FRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWV 302
+V + +R PE+ E + D++ G + E+ W
Sbjct: 188 NRVVTLWYRPPELLLGERD--YGPPIDLWGAGCIMAEM--------------------WT 225
Query: 303 RSRLSSNNFVDHRLA 317
RS + N H+LA
Sbjct: 226 RSPIMQGNTEQHQLA 240
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHL-------- 170
S + ++E+ L I H N+V LLG C + G M++ E+ G++ +L
Sbjct: 74 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 133
Query: 171 -YETGLESSTK--LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKV 227
Y+ E K L + + + AKG+ L S K +H++ N+L+ E + K+
Sbjct: 134 PYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKI 191
Query: 228 ADTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
D G+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 192 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 61 SSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR 118
++ P GP ++ S +++T +IG GSFG VY+ L D+ +VAIK+
Sbjct: 4 TTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV 53
Query: 119 VGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCNHLYE 172
+ R + E+ + ++ H N+V L + +G Y LV +Y+P +Y
Sbjct: 54 LQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-----VYR 107
Query: 173 TGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFIAKVA 228
S + + + L + L ++HS + H++ K N+L+D + + K+
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 165
Query: 229 DTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
D G +K L E P+ I + +R PE+ ++ D++S G L EL+ GQ
Sbjct: 166 DFGSAKQLVRGE---PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 61 SSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR 118
++ P GP ++ S +++T +IG GSFG VY+ L D+ +VAIK+
Sbjct: 9 TTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV 58
Query: 119 VGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCNHLYE 172
+ R + E+ + ++ H N+V L + +G Y LV +Y+P +Y
Sbjct: 59 LQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-----VYR 112
Query: 173 TGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFIAKVA 228
S + + + L + L ++HS + H++ K N+L+D + + K+
Sbjct: 113 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 170
Query: 229 DTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
D G +K L E P+ I + +R PE+ ++ D++S G L EL+ GQ
Sbjct: 171 DFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 35/242 (14%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVA 114
G+ ++ P GP ++ S +++T +IG GSFG VY+ L D+ +VA
Sbjct: 38 GSKVTTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVA 87
Query: 115 IKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCN 168
IK+ + R + E+ + ++ H N+V L + +G Y LV +Y+P
Sbjct: 88 IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET---- 142
Query: 169 HLYETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFI 224
+Y S + + + L + L ++HS + H++ K N+L+D + +
Sbjct: 143 -VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAV 199
Query: 225 AKVADTGISKLLENIEEAGPSHGSIVN-VFRDPE-VEESGVFSEMSDIYSFGVFLLELVT 282
K+ D G +K L E P+ I + +R PE + + ++ D++S G L EL+
Sbjct: 200 LKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 256
Query: 283 GQ 284
GQ
Sbjct: 257 GQ 258
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 61 SSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR 118
++ P GP ++ S +++T +IG GSFG VY+ L D+ +VAIK+
Sbjct: 4 TTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV 53
Query: 119 VGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCNHLYE 172
+ R + E+ + ++ H N+V L + +G Y LV +Y+P +Y
Sbjct: 54 LQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-----VYR 107
Query: 173 TGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFIAKVA 228
S + + + L + L ++HS + H++ K N+L+D + + K+
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 165
Query: 229 DTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
D G +K L E P+ I + +R PE+ ++ D++S G L EL+ GQ
Sbjct: 166 DFGSAKQLVRGE---PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 61 SSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR 118
++ P GP ++ S +++T +IG GSFG VY+ L D+ +VAIK+
Sbjct: 5 TTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV 54
Query: 119 VGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCNHLYE 172
+ R + E+ + ++ H N+V L + +G Y LV +Y+P +Y
Sbjct: 55 LQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-----VYR 108
Query: 173 TGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFIAKVA 228
S + + + L + L ++HS + H++ K N+L+D + + K+
Sbjct: 109 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 166
Query: 229 DTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
D G +K L E P+ I + +R PE+ ++ D++S G L EL+ GQ
Sbjct: 167 DFGSAKQLVRGE---PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 57 GAGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVA 114
G+ ++ P GP ++ S +++T +IG GSFG VY+ L D+ +VA
Sbjct: 36 GSKVTTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVA 85
Query: 115 IKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCN 168
IK+ + R + E+ + ++ H N+V L + +G Y LV +Y+P
Sbjct: 86 IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET---- 140
Query: 169 HLYETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFI 224
+Y S + + + L + L ++HS + H++ K N+L+D + +
Sbjct: 141 -VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAV 197
Query: 225 AKVADTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVT 282
K+ D G +K L E P+ I + +R PE+ ++ D++S G L EL+
Sbjct: 198 LKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 254
Query: 283 GQ 284
GQ
Sbjct: 255 GQ 256
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 123 RQEFVAEVTYLSEIRHRNLVTLLGYC--QQNGYQMLVFEYLPNGSMCNHLYE-TGLESST 179
+Q V+EV L E++H N+V + N +V EY G + + + + T
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 180 KLEFKQRVSIALGAAKGLCHLHSLK-PPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
EF RV L A CH S ++H++ K ANV +D K+ D G++++L +
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLEL 280
E+ + PE ++E SDI+S G L EL
Sbjct: 169 DEDFAKEFVG-TPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 61 SSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR 118
++ P GP ++ S +++T +IG GSFG VY+ L D+ +VAIK+
Sbjct: 4 TTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV 53
Query: 119 VGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCNHLYE 172
+ R + E+ + ++ H N+V L + +G Y LV +Y+P +Y
Sbjct: 54 LQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPET-----VYR 107
Query: 173 TGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFIAKVA 228
S + + + L + L ++HS + H++ K N+L+D + + K+
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 165
Query: 229 DTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
D G +K L E P+ I + +R PE+ ++ D++S G L EL+ GQ
Sbjct: 166 DFGSAKQLVRGE---PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 62/275 (22%)
Query: 70 GPQGARQFSMEELE--QATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQE 125
GP A+Q+ E ++ + + IG G+FG V+K R T VA+K+ + +E
Sbjct: 1 GP--AKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE 58
Query: 126 -----FVAEVTYLSEIRHRNLVTLLGYCQQN--------GYQMLVFEYLPNGSMCNH--- 169
+ E+ L ++H N+V L+ C+ G LVF++ C H
Sbjct: 59 GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDF------CEHDLA 112
Query: 170 -LYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVA 228
L L T E K+ + + L GL ++H K ++H++ K ANVL+ + + K+A
Sbjct: 113 GLLSNVLVKFTLSEIKRVMQMLLN---GLYYIHRNK--ILHRDMKAANVLITRDGVLKLA 167
Query: 229 DTGISKLLENIEEAGPSH--GSIVNV-FRDPEV---EESGVFSEMSDIYSFGVFLLELVT 282
D G+++ + + P+ +V + +R PE+ E + D++ G + E+
Sbjct: 168 DFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERD--YGPPIDLWGAGCIMAEM-- 223
Query: 283 GQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
W RS + N H+LA
Sbjct: 224 ------------------WTRSPIMQGNTEQHQLA 240
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 28/227 (12%)
Query: 72 QGARQFSMEELEQAT--KQFSETSLIGFGSFGPVYKGLLRDTV----VAIKRRVGSPRQE 125
QG S+ AT ++ + +G G++G VYK + DTV VAIKR +E
Sbjct: 17 QGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAI--DTVTNETVAIKRIRLEHEEE 74
Query: 126 FVA-----EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTK 180
V EV+ L E++HRN++ L N L+FEY N + ++ +
Sbjct: 75 GVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEND------LKKYMDKNPD 128
Query: 181 LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLV-----DENFIAKVADTGISKL 235
+ + S G+ HS + +H++ K N+L+ E + K+ D G+++
Sbjct: 129 VSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186
Query: 236 LENIEEAGPSHGSIVNVFRDPEV-EESGVFSEMSDIYSFGVFLLELV 281
I +H I +R PE+ S +S DI+S E++
Sbjct: 187 F-GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 124/286 (43%), Gaps = 39/286 (13%)
Query: 94 LIGFGSFGPVYKGLLRD--------TVVAIKRRVGSPRQ--EFVAEVTYLSEIRHRNLVT 143
++G G FG V +G L+ V +K S R+ EF++E + + H N++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 144 LLGYCQQNGYQ-----MLVFEYLPNGSMCNHLYETGLESSTK-LEFKQRVSIALGAAKGL 197
LLG C + Q M++ ++ G + +L + LE+ K + + + + A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV---FR 254
+L + +H++ N ++ ++ VAD G+SK + + + G I + +
Sbjct: 161 EYLSNRN--FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY--RQGRIAKMPVKWI 216
Query: 255 DPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH--IVSLGSYEALIQWVRSRLSSNNFV 312
E V++ SD+++FGV + E+ T + + + Y+ L+
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH------------ 264
Query: 313 DHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERIHE 358
HRL + + +L + C + RP ++ +LE++ E
Sbjct: 265 GHRLKQ--PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 28/195 (14%)
Query: 113 VAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCN 168
VAIKR + + E + E+ +S+ H N+V+ LV + L GS+ +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 169 ---HLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIA 225
H+ G S L+ +I +GL +LH K +H++ K N+L+ E+
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSV 160
Query: 226 KVADTGISKLLENIEEAGPSHGSIVN-----------VFRDPEV-EESGVFSEMSDIYSF 273
++AD G+S L + G I + PEV E+ + +DI+SF
Sbjct: 161 QIADFGVSAFL-------ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 213
Query: 274 GVFLLELVTGQEASH 288
G+ +EL TG H
Sbjct: 214 GITAIELATGAAPYH 228
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 45/295 (15%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S+ H+N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 202 SLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+H++ N L+ +AK+ D G+++ + +++ V + PE
Sbjct: 150 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 207
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLG-------SYEALIQWVRSRLSSNN 310
G+F+ +D +SFGV L E I SLG S + ++++V S
Sbjct: 208 AFMEGIFTSKTDTWSFGVLLWE---------IFSLGYMPYPSKSNQEVLEFVTS------ 252
Query: 311 FVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
R+ G + R+ QC RP I++ +E + + T
Sbjct: 253 --GGRMDPPKNCPG--PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 303
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 49/297 (16%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S+ H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 202 SLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+H++ N L+ +AK+ D G+++ + +++ V + PE
Sbjct: 159 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
G+F+ +D +SFGV L E I SLG ++ SN V
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWE---------IFSLG-------YMPYPSKSNQEVLE--- 257
Query: 318 GTFTTEGMR---------DLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
F T G R + R+ QC RP I++ +E + + T
Sbjct: 258 --FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 312
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 49/297 (16%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S+ H+N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 202 SLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+H++ N L+ +AK+ D G+++ + +++ V + PE
Sbjct: 175 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 232
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
G+F+ +D +SFGV L E I SLG ++ SN V
Sbjct: 233 AFMEGIFTSKTDTWSFGVLLWE---------IFSLG-------YMPYPSKSNQEVLE--- 273
Query: 318 GTFTTEGMR---------DLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
F T G R + R+ QC RP I++ +E + + T
Sbjct: 274 --FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 328
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 26/231 (11%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R+E EV L EIRH N++TL + +L+ E + G + + L E ES
Sbjct: 54 RRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ES 111
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFI---AKVADTGIS 233
T+ E Q + L G+ +LHS + + H + K N+ L+D+N K+ D GI+
Sbjct: 112 LTEDEATQFLKQILD---GVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
Query: 234 KLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVS 291
+ EAG +I F PE+ +D++S GV L++G AS +
Sbjct: 167 HKI----EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASPFLG 220
Query: 292 LGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRR 342
E L + +S+ N+ + T+E +D IR L + P RR
Sbjct: 221 ETKQETL-----TNISAVNYDFDEEYFSNTSELAKDFIRRLL--VKDPKRR 264
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 61 SSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR 118
++ P GP ++ S +++T +IG GSFG VY+ L D+ +VAIK+
Sbjct: 4 TTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV 53
Query: 119 VGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCNHLYE 172
+ R + E+ + ++ H N+V L + +G Y LV +Y+P +Y
Sbjct: 54 LQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-----VYR 107
Query: 173 TGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFIAKVA 228
S + + + L + L ++HS + H++ K N+L+D + + K+
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 165
Query: 229 DTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
D G +K L E P+ I + +R PE+ ++ D++S G L EL+ GQ
Sbjct: 166 DFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 28/195 (14%)
Query: 113 VAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCN 168
VAIKR + + E + E+ +S+ H N+V+ LV + L GS+ +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 169 ---HLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIA 225
H+ G S L+ +I +GL +LH K +H++ K N+L+ E+
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSV 155
Query: 226 KVADTGISKLLENIEEAGPSHGSIVN-----------VFRDPEV-EESGVFSEMSDIYSF 273
++AD G+S L + G I + PEV E+ + +DI+SF
Sbjct: 156 QIADFGVSAFL-------ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 208
Query: 274 GVFLLELVTGQEASH 288
G+ +EL TG H
Sbjct: 209 GITAIELATGAAPYH 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 58/255 (22%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQE-----FVAEVTYLSEIRHRN 140
++ + + IG G+FG V+K R T VA+K+ + +E + E+ L ++H N
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 141 LVTLLGYCQQN--------GYQMLVFEYLPNGSMCNH----LYETGLESSTKLEFKQRVS 188
+V L+ C+ G LVF++ C H L L T E K+ +
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDF------CEHDLAGLLSNVLVKFTLSEIKRVMQ 131
Query: 189 IALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH-- 246
+ L GL ++H K ++H++ K ANVL+ + + K+AD G+++ + + P+
Sbjct: 132 MLLN---GLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 247 GSIVNV-FRDPEV---EESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWV 302
+V + +R PE+ E + D++ G + E+ W
Sbjct: 187 NRVVTLWYRPPELLLGERD--YGPPIDLWGAGCIMAEM--------------------WT 224
Query: 303 RSRLSSNNFVDHRLA 317
RS + N H+LA
Sbjct: 225 RSPIMQGNTEQHQLA 239
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 49/297 (16%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S+ H+N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 202 SLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+H++ N L+ +AK+ D G+++ + +++ V + PE
Sbjct: 165 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 222
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
G+F+ +D +SFGV L E I SLG ++ SN V
Sbjct: 223 AFMEGIFTSKTDTWSFGVLLWE---------IFSLG-------YMPYPSKSNQEVLE--- 263
Query: 318 GTFTTEGMR---------DLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
F T G R + R+ QC RP I++ +E + + T
Sbjct: 264 --FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 318
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 45/295 (15%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S+ H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 202 SLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+H++ N L+ +AK+ D G+++ + +++ V + PE
Sbjct: 158 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLG-------SYEALIQWVRSRLSSNN 310
G+F+ +D +SFGV L E I SLG S + ++++V S
Sbjct: 216 AFMEGIFTSKTDTWSFGVLLWE---------IFSLGYMPYPSKSNQEVLEFVTS------ 260
Query: 311 FVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
R+ G + R+ QC RP I++ +E + + T
Sbjct: 261 --GGRMDPPKNCPG--PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 311
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 26/231 (11%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R+E EV L EIRH N++TL + +L+ E + G + + L E ES
Sbjct: 47 RRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ES 104
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFI---AKVADTGIS 233
T+ E Q + L G+ +LHS + + H + K N+ L+D+N K+ D GI+
Sbjct: 105 LTEDEATQFLKQILD---GVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
Query: 234 KLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVS 291
+ EAG +I F PE+ +D++S GV L++G AS +
Sbjct: 160 HKI----EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASPFLG 213
Query: 292 LGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRR 342
E L + +S+ N+ + T+E +D IR L + P RR
Sbjct: 214 ETKQETL-----TNISAVNYDFDEEYFSNTSELAKDFIRRLL--VKDPKRR 257
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 49/297 (16%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S+ H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 202 SLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+H++ N L+ +AK+ D G+++ + +++ V + PE
Sbjct: 173 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
G+F+ +D +SFGV L E I SLG ++ SN V
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWE---------IFSLG-------YMPYPSKSNQEVLE--- 271
Query: 318 GTFTTEGMR---------DLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
F T G R + R+ QC RP I++ +E + + T
Sbjct: 272 --FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 326
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 53/279 (18%)
Query: 86 TKQFSETSLIGFGSFGPVYKGLLRDTV--------VAIKRRVG--SPRQEFVAEVTYLSE 135
+ ++ ++G GSFG V L +D + V KR+V + ++ + EV L +
Sbjct: 48 SDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 105
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
+ H N++ L + + GY LV E G + + + S + I
Sbjct: 106 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQVLS 160
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV 252
G+ ++H K +VH++ K N+L++ ++ ++ D G+S E ++ G+ +
Sbjct: 161 GITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 218
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVTG---------QEASHIVSLGSYE-ALIQWV 302
PEV G + E D++S GV L L++G + V G Y L QW
Sbjct: 219 A--PEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 275
Query: 303 R------------------SRLSSNNFVDHRLAGTFTTE 323
+ R+S+ + +DH T+T E
Sbjct: 276 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE 314
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 53/279 (18%)
Query: 86 TKQFSETSLIGFGSFGPVYKGLLRDTV--------VAIKRRVG--SPRQEFVAEVTYLSE 135
+ ++ ++G GSFG V L +D + V KR+V + ++ + EV L +
Sbjct: 49 SDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 106
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
+ H N++ L + + GY LV E G + + + S + I
Sbjct: 107 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQVLS 161
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV 252
G+ ++H K +VH++ K N+L++ ++ ++ D G+S E ++ G+ +
Sbjct: 162 GITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 219
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVTG---------QEASHIVSLGSYE-ALIQWV 302
PEV G + E D++S GV L L++G + V G Y L QW
Sbjct: 220 A--PEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 276
Query: 303 R------------------SRLSSNNFVDHRLAGTFTTE 323
+ R+S+ + +DH T+T E
Sbjct: 277 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE 315
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQR 186
E+ L RH +++ L +V EY+ G + +++ + G E + F+Q
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+S A CH H + VH++ K NVL+D + AK+AD G+S ++ + E S
Sbjct: 121 LS-----AVDYCHRHMV----VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC 171
Query: 247 GSIVNVFRDPEVEESGVFS-EMSDIYSFGVFLLELVTG 283
GS + PEV +++ DI+S GV L L+ G
Sbjct: 172 GS--PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 49/297 (16%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S+ H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 202 SLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+H++ N L+ +AK+ D G+++ + +++ V + PE
Sbjct: 159 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
G+F+ +D +SFGV L E I SLG ++ SN V
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWE---------IFSLG-------YMPYPSKSNQEVLE--- 257
Query: 318 GTFTTEGMR---------DLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
F T G R + R+ QC RP I++ +E + + T
Sbjct: 258 --FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 312
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 45/295 (15%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S+ H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 202 SLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+H++ N L+ +AK+ D G+++ + +++ V + PE
Sbjct: 158 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLG-------SYEALIQWVRSRLSSNN 310
G+F+ +D +SFGV L E I SLG S + ++++V S
Sbjct: 216 AFMEGIFTSKTDTWSFGVLLWE---------IFSLGYMPYPSKSNQEVLEFVTS------ 260
Query: 311 FVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
R+ G + R+ QC RP I++ +E + + T
Sbjct: 261 --GGRMDPPKNCPG--PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 311
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 90 SETSLIGFGSFGPVYKGL-----LRDTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTL 144
S+T ++G G FG V+K L+ IK R ++E E++ ++++ H NL+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLK 204
+ +LV EY+ G L++ ++ S L + +G+ H+H +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGE----LFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY 207
Query: 205 PPLVHKNFKTANVLV---DENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
++H + K N+L D I K+ D G+++ + E+ + G+ F PEV
Sbjct: 208 --ILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKPREKLKVNFGT--PEFLAPEVVNY 262
Query: 262 GVFSEMSDIYSFGVFLLELVTG 283
S +D++S GV L++G
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSG 284
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFVA-----EVTYLSEIRHR 139
+++ + IG G++G V+K R+T +VA+KR E V E+ L E++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESST-KLEFKQRVSIALGAAKGLC 198
N+V L + LVFE+ C+ + +S L+ + S KGL
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEF------CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV 258
HS ++H++ K N+L++ N K+A+ G+++ I S + +R P+V
Sbjct: 116 FCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVVTLWYRPPDV 172
Query: 259 E-ESGVFSEMSDIYSFGVFLLELVTG 283
+ ++S D++S G EL
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANA 198
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 95 IGFGSFGPVYKGLLR----DTVVAIK-RRVGSPR---QEFVAEVTYLSEIRHRNLVTLLG 146
+G G+FG V +G+ R VAIK + G+ + +E + E + ++ + +V L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 147 YCQQNGYQMLVFEYLPNGSMCNHLYETG----LESSTKLEFKQRVSIALGAAKGLCHLHS 202
CQ MLV E G + H + G + S E +VS+ G+ +L
Sbjct: 404 VCQAEAL-MLVMEMAGGGPL--HKFLVGKREEIPVSNVAELLHQVSM------GMKYLEE 454
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLL--ENIEEAGPSHGSIVNVFRDPEVEE 260
VH+N NVL+ AK++D G+SK L ++ S G + PE
Sbjct: 455 KN--FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 512
Query: 261 SGVFSEMSDIYSFGVFLLE-LVTGQE 285
FS SD++S+GV + E L GQ+
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQK 538
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 26/231 (11%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R+E EV L EIRH N++TL + +L+ E + G + + L E ES
Sbjct: 68 RRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ES 125
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFI---AKVADTGIS 233
T+ E Q + L G+ +LHS + + H + K N+ L+D+N K+ D GI+
Sbjct: 126 LTEDEATQFLKQIL---DGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
Query: 234 KLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVS 291
+ EAG +I F PE+ +D++S GV L++G AS +
Sbjct: 181 HKI----EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASPFLG 234
Query: 292 LGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRR 342
E L + +S+ N+ + T+E +D IR L + P RR
Sbjct: 235 ETKQETL-----TNISAVNYDFDEEYFSNTSELAKDFIRRLL--VKDPKRR 278
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQR 186
E+ L RH +++ L +V EY+ G + +++ + G E + F+Q
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+S A CH H + VH++ K NVL+D + AK+AD G+S ++ + E S
Sbjct: 121 LS-----AVDYCHRHMV----VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 171
Query: 247 GSIVNVFRDPEVEESGVFS-EMSDIYSFGVFLLELVTG 283
GS + PEV +++ DI+S GV L L+ G
Sbjct: 172 GS--PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 119/297 (40%), Gaps = 49/297 (16%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S+ H+N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG---PSHGSIVNV-FRDPE 257
+H++ N L+ +VA G + +I AG +++ V + PE
Sbjct: 176 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 233
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
G+F+ +D +SFGV L E I SLG ++ SN V
Sbjct: 234 AFMEGIFTSKTDTWSFGVLLWE---------IFSLG-------YMPYPSKSNQEVLE--- 274
Query: 318 GTFTTEGMR---------DLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
F T G R + R+ QC RP I++ +E + + T
Sbjct: 275 --FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 329
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 53/271 (19%)
Query: 94 LIGFGSFGPVYKGLLRDTV--------VAIKRRVG--SPRQEFVAEVTYLSEIRHRNLVT 143
++G GSFG V L +D + V KR+V + ++ + EV L ++ H N++
Sbjct: 33 VLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
L + + GY LV E G + + + S + I G+ ++H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQVLSGITYMH-- 143
Query: 204 KPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEE 260
K +VH++ K N+L++ ++ ++ D G+S E ++ G+ + PEV
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA--PEVLH 201
Query: 261 SGVFSEMSDIYSFGVFLLELVTG---------QEASHIVSLGSYE-ALIQWVR------- 303
G + E D++S GV L L++G + V G Y L QW +
Sbjct: 202 -GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 260
Query: 304 -----------SRLSSNNFVDHRLAGTFTTE 323
R+S+ + +DH T+T E
Sbjct: 261 LIRKMLTYVPSMRISARDALDHEWIQTYTKE 291
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 119/297 (40%), Gaps = 49/297 (16%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S+ H+N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAG---PSHGSIVNV-FRDPE 257
+H++ N L+ +VA G + +I AG +++ V + PE
Sbjct: 199 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 256
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
G+F+ +D +SFGV L E I SLG ++ SN V
Sbjct: 257 AFMEGIFTSKTDTWSFGVLLWE---------IFSLG-------YMPYPSKSNQEVLE--- 297
Query: 318 GTFTTEGMR---------DLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
F T G R + R+ QC RP I++ +E + + T
Sbjct: 298 --FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 352
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 49/297 (16%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S+ H+N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 202 SLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+H++ N L+ +AK+ D G+++ + +++ V + PE
Sbjct: 185 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 242
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
G+F+ +D +SFGV L E I SLG ++ SN V
Sbjct: 243 AFMEGIFTSKTDTWSFGVLLWE---------IFSLG-------YMPYPSKSNQEVLE--- 283
Query: 318 GTFTTEGMR---------DLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
F T G R + R+ QC RP I++ +E + + T
Sbjct: 284 --FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 338
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 49/297 (16%)
Query: 95 IGFGSFGPVYKGLLRDTV-------VAIKR--RVGSPRQE--FVAEVTYLSEIRHRNLVT 143
+G G+FG VY+G + VA+K V S + E F+ E +S+ H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESS--TKLEFKQRVSIALGAAKGLCHLH 201
+G Q+ + ++ E + G + + L ET S + L + +A A G +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 202 SLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPE 257
+H++ N L+ +AK+ D G+++ + +++ V + PE
Sbjct: 173 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
G+F+ +D +SFGV L E I SLG ++ SN V
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWE---------IFSLG-------YMPYPSKSNQEVLE--- 271
Query: 318 GTFTTEGMR---------DLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMALTT 365
F T G R + R+ QC RP I++ +E + + T
Sbjct: 272 --FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 326
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR--VGSPRQEFVA-EVTYLSEIRHRNL 141
K+++ IG G+ G VY + T VAI++ P++E + E+ + E ++ N+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V L +V EYL GS+ + + ET ++ Q ++ + L LH
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLH 134
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
S + ++H+N K+ N+L+ + K+ D G + E++ S + PEV
Sbjct: 135 SNQ--VIHRNIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSTMVGTPYWMAPEVVTR 191
Query: 262 GVFSEMSDIYSFGVFLLELVTGQ 284
+ DI+S G+ +E++ G+
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 94 LIGFGSFGPVYKGLLRD--------TVVAIKRRVG-SPRQEFVAEVTYLSEIRHRNLVTL 144
++G G FG VY+G+ + V K+ +++F++E + + H ++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLK 204
+G ++ ++ E P G + ++L + L+ V +L K + +L S+
Sbjct: 75 IGIIEEEP-TWIIMELYPYGELGHYLER----NKNSLKVLTLVLYSLQICKAMAYLESIN 129
Query: 205 PPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVF 264
VH++ N+LV K+ D G+S+ +E+ + S + + PE F
Sbjct: 130 --CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 187
Query: 265 SEMSDIYSFGVFLLELVT 282
+ SD++ F V + E+++
Sbjct: 188 TTASDVWMFAVCMWEILS 205
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 94 LIGFGSFGPVYKGLLRD--------TVVAIKRRVG-SPRQEFVAEVTYLSEIRHRNLVTL 144
++G G FG VY+G+ + V K+ +++F++E + + H ++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 145 LGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLK 204
+G ++ ++ E P G + ++L + L+ V +L K + +L S+
Sbjct: 79 IGIIEEEP-TWIIMELYPYGELGHYLER----NKNSLKVLTLVLYSLQICKAMAYLESIN 133
Query: 205 PPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVF 264
VH++ N+LV K+ D G+S+ +E+ + S + + PE F
Sbjct: 134 --CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 265 SEMSDIYSFGVFLLELVT 282
+ SD++ F V + E+++
Sbjct: 192 TTASDVWMFAVCMWEILS 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHL-------- 170
S + ++E+ L I H N+V LLG C + G M++ E+ G++ +L
Sbjct: 74 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 133
Query: 171 -YETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVAD 229
Y+ L + + + AKG+ L S K +H++ N+L+ E + K+ D
Sbjct: 134 PYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK--XIHRDLAARNILLSEKNVVKICD 191
Query: 230 TGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
G+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 82 LEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRV------GSPRQEFVAEVTYLSE 135
+E F + S +G G+ G V+K + + + + R++ + R + + E+ L E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
+V G +G + E++ GS+ L + G L +VSIA+ K
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAV--IK 115
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSHGSIVNVFR 254
GL +L K ++H++ K +N+LV+ K+ D G+S +L++++ + S +
Sbjct: 116 GLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS----YM 170
Query: 255 DPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PE + +S SDI+S G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 20/213 (9%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKG-LLRDTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNL 141
EQ ++ +IG GSFG V++ L+ VAIK+ + R + E+ + ++H N+
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK-NRELQIMRIVKHPNV 94
Query: 142 VTLLGYCQQNG------YQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
V L + NG + LV EY+P + L+ + + + L +
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL--LR 152
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVD-ENFIAKVADTGISKLLENIEEAGPSHGSIV--NV 252
L ++HS+ + H++ K N+L+D + + K+ D G +K+L AG + S +
Sbjct: 153 SLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL----IAGEPNVSXICSRY 206
Query: 253 FRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+R PE+ ++ DI+S G + EL+ GQ
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 82 LEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRV------GSPRQEFVAEVTYLSE 135
+E F + S +G G+ G V+K + + + + R++ + R + + E+ L E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
+V G +G + E++ GS+ L + G L +VSIA+ K
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAV--IK 115
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSHGSIVNVFR 254
GL +L K ++H++ K +N+LV+ K+ D G+S +L++++ + S +
Sbjct: 116 GLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS----YM 170
Query: 255 DPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PE + +S SDI+S G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 82 LEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRV------GSPRQEFVAEVTYLSE 135
+E F + S +G G+ G V+K + + + + R++ + R + + E+ L E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
+V G +G + E++ GS+ L + G L +VSIA+ K
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAV--IK 115
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSHGSIVNVFR 254
GL +L K ++H++ K +N+LV+ K+ D G+S +L++++ + S +
Sbjct: 116 GLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS----YM 170
Query: 255 DPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PE + +S SDI+S G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHL-------- 170
S + ++E+ L I H N+V LLG C + G M++ E+ G++ +L
Sbjct: 73 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 132
Query: 171 -YETGLESSTK-LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVA 228
Y+T + L + + + AKG+ L S K +H++ N+L+ E + K+
Sbjct: 133 PYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKIC 190
Query: 229 DTGISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
D G+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 15/196 (7%)
Query: 95 IGFGSFGPVYKGLLRDTVVAIKRR-VGSP----RQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
+G G+FG V++ R T + V +P ++ E+ +S +RH LV L +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+ ++++E++ G L+E + K+ + V KGLCH+H VH
Sbjct: 225 DDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN--YVH 278
Query: 210 KNFKTANVL--VDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEM 267
+ K N++ + K+ D G++ L+ + + G+ F PEV E
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA--EFAAPEVAEGKPVGYY 336
Query: 268 SDIYSFGVFLLELVTG 283
+D++S GV L++G
Sbjct: 337 TDMWSVGVLSYILLSG 352
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 82 LEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRV------GSPRQEFVAEVTYLSE 135
+E F + S +G G+ G V+K + + + + R++ + R + + E+ L E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
+V G +G + E++ GS+ L + G L +VSIA+ K
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAV--IK 115
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSHGSIVNVFR 254
GL +L K ++H++ K +N+LV+ K+ D G+S +L++++ + S +
Sbjct: 116 GLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS----YM 170
Query: 255 DPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PE + +S SDI+S G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 31/240 (12%)
Query: 79 MEELEQATKQFSETSLIGFGSFG-----------PVYKGLLRDTVVAIKRRVGSPRQEFV 127
+ +L + + +IG G+FG VY L IKR S F
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR---SDSAFFW 122
Query: 128 AEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRV 187
E ++ +V L Q + Y +V EY+P G + N + + + V
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 182
Query: 188 SIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL--ENIEEAGPS 245
+AL A +HS+ +H++ K N+L+D++ K+AD G + E + +
Sbjct: 183 VLALDA------IHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 246 HGSIVNVFRDPEVEES----GVFSEMSDIYSFGVFLLELVTGQEASHIVSL-GSYEALIQ 300
G+ + PEV +S G + D +S GVFL E++ G + SL G+Y ++
Sbjct: 235 VGTPDYI--SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 292
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 62/275 (22%)
Query: 70 GPQGARQFSMEELE--QATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQE 125
GP A+Q+ E ++ + + IG G+FG V+K R T VA+K+ + +E
Sbjct: 1 GP--AKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE 58
Query: 126 -----FVAEVTYLSEIRHRNLVTLLGYCQQNGYQM--------LVFEYLPNGSMCNH--- 169
+ E+ L ++H N+V L+ C+ LVF++ C H
Sbjct: 59 GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDF------CEHDLA 112
Query: 170 -LYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVA 228
L L T E K+ + + L GL ++H K ++H++ K ANVL+ + + K+A
Sbjct: 113 GLLSNVLVKFTLSEIKRVMQMLLN---GLYYIHRNK--ILHRDMKAANVLITRDGVLKLA 167
Query: 229 DTGISKLLENIEEAGPSH--GSIVNV-FRDPEV---EESGVFSEMSDIYSFGVFLLELVT 282
D G+++ + + P+ +V + +R PE+ E + D++ G + E+
Sbjct: 168 DFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERD--YGPPIDLWGAGCIMAEM-- 223
Query: 283 GQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
W RS + N H+LA
Sbjct: 224 ------------------WTRSPIMQGNTEQHQLA 240
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 81 ELEQATKQFSETSLIGFGSFGPVYKGLLRDT-----VVAIKRRVGSPRQEF---VAEVTY 132
+++ + F ++G GSFG V+ + T + A+K+ V + + E
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 133 LS-EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIAL 191
LS H L + Q V EYL G + H+ +S K + + A
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-----QSCHKFDLSRATFYAA 126
Query: 192 GAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN-IEEAGPSHGSIV 250
GL LHS +V+++ K N+L+D++ K+AD G+ K EN + +A +
Sbjct: 127 EIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGT 182
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ PE+ ++ D +SFGV L E++ GQ H
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 220
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 31/240 (12%)
Query: 79 MEELEQATKQFSETSLIGFGSFG-----------PVYKGLLRDTVVAIKRRVGSPRQEFV 127
+ +L + + +IG G+FG VY L IKR S F
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR---SDSAFFW 122
Query: 128 AEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRV 187
E ++ +V L Q + Y +V EY+P G + N + + + V
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 182
Query: 188 SIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL--ENIEEAGPS 245
+AL A +HS+ +H++ K N+L+D++ K+AD G + E + +
Sbjct: 183 VLALDA------IHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 246 HGSIVNVFRDPEVEES----GVFSEMSDIYSFGVFLLELVTGQEASHIVSL-GSYEALIQ 300
G+ + PEV +S G + D +S GVFL E++ G + SL G+Y ++
Sbjct: 235 VGTPDYI--SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 292
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR--VGSPRQEFVA-EVTYLSEIRHRNL 141
K+++ IG G+ G VY + T VAI++ P++E + E+ + E ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V L +V EYL GS+ + + ET ++ Q ++ + L LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLH 133
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
S + ++H++ K+ N+L+ + K+ D G + E++ S + PEV
Sbjct: 134 SNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSEMVGTPYWMAPEVVTR 190
Query: 262 GVFSEMSDIYSFGVFLLELVTGQ 284
+ DI+S G+ +E++ G+
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 82 LEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRV------GSPRQEFVAEVTYLSE 135
+E F + S +G G+ G V+K + + + + R++ + R + + E+ L E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
+V G +G + E++ GS+ L + G L +VSIA+ K
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAV--IK 115
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSHGSIVNVFR 254
GL +L K ++H++ K +N+LV+ K+ D G+S +L++++ + S +
Sbjct: 116 GLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS----YM 170
Query: 255 DPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PE + +S SDI+S G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 15/196 (7%)
Query: 95 IGFGSFGPVYKGLLRDTVVAIKRR-VGSP----RQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
+G G+FG V++ R T + V +P ++ E+ +S +RH LV L +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+ ++++E++ G L+E + K+ + V KGLCH+H VH
Sbjct: 119 DDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN--YVH 172
Query: 210 KNFKTANVL--VDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEM 267
+ K N++ + K+ D G++ L+ + + G+ F PEV E
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA--EFAAPEVAEGKPVGYY 230
Query: 268 SDIYSFGVFLLELVTG 283
+D++S GV L++G
Sbjct: 231 TDMWSVGVLSYILLSG 246
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF IG GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+P G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ KVAD G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRV------GSPRQEFVAEVTYLSEI 136
E F + S +G G+ G V+K + + + + R++ + R + + E+ L E
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
+V G +G + E++ GS+ L + G L +VSIA+ KG
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAV--IKG 119
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDP 256
L +L K ++H++ K +N+LV+ K+ D G+S L + E A G+ + P
Sbjct: 120 LTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-EMANEFVGT--RSYMSP 175
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTGQ 284
E + +S SDI+S G+ L+E+ G+
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 88 QFSETSLIGFGSFGPVYKGLLR-DTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLG 146
F E LIG G FG V+K R D + RRV ++ EV L+++ H N+V G
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNG 72
Query: 147 YCQQNGYQ-------MLVFEYLPNGSMCNHLYETG-----LESSTKLEFKQRVSIALGA- 193
Y + +Y P S + +T +E K +Q + G
Sbjct: 73 CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 132
Query: 194 -------------AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE 240
KG+ ++HS K L+H++ K +N+ + + K+ D G+ L+N
Sbjct: 133 LDKVLALELFEQITKGVDYIHSKK--LIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 241 EAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELV 281
+ S G++ + PE S + + D+Y+ G+ L EL+
Sbjct: 191 KRTRSKGTL--RYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRV------GSPRQEFVAEVTYLSEI 136
E F + S +G G+ G V+K + + + + R++ + R + + E+ L E
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
+V G +G + E++ GS+ L + G L +VSIA+ KG
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAV--IKG 135
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSHGSIVNVFRD 255
L +L K ++H++ K +N+LV+ K+ D G+S +L++++ + S +
Sbjct: 136 LTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS----YMS 190
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PE + +S SDI+S G+ L+E+ G+
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 31/240 (12%)
Query: 79 MEELEQATKQFSETSLIGFGSFG-----------PVYKGLLRDTVVAIKRRVGSPRQEFV 127
+ +L + + +IG G+FG VY L IKR S F
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR---SDSAFFW 117
Query: 128 AEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRV 187
E ++ +V L Q + Y +V EY+P G + N + + + V
Sbjct: 118 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 177
Query: 188 SIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL--ENIEEAGPS 245
+AL A +HS+ +H++ K N+L+D++ K+AD G + E + +
Sbjct: 178 VLALDA------IHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 229
Query: 246 HGSIVNVFRDPEVEES----GVFSEMSDIYSFGVFLLELVTGQEASHIVSL-GSYEALIQ 300
G+ + PEV +S G + D +S GVFL E++ G + SL G+Y ++
Sbjct: 230 VGTPDYI--SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 287
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF IG GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+P G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ KVAD G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYCQQ-NGYQMLVFEYLPNGSMCNHLYETGLE-- 176
S + ++E+ L I H N+V LLG C + G M++ E+ G++ +L E
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Query: 177 -----SSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTG 231
L + + + AKG+ L S K +H++ N+L+ E + K+ D G
Sbjct: 132 PYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK--XIHRDLAARNILLSEKNVVKICDFG 189
Query: 232 ISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR--VGSPRQEFVA-EVTYLSEIRHRNL 141
K+++ IG G+ G VY + T VAI++ P++E + E+ + E ++ N+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V L +V EYL GS+ + + ET ++ Q ++ + L LH
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLH 134
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
S + ++H++ K+ N+L+ + K+ D G + E++ S + PEV
Sbjct: 135 SNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSXMVGTPYWMAPEVVTR 191
Query: 262 GVFSEMSDIYSFGVFLLELVTGQ 284
+ DI+S G+ +E++ G+
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 128 AEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL-ESSTKLEFKQR 186
AE L E++H +V L+ Q G L+ EYL G + L G+ T +
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE 129
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+S+ALG HLH + +++++ K N++++ K+ D G+ K E+I + +H
Sbjct: 130 ISMALG------HLH--QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTH 179
Query: 247 GSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ + PE+ + D +S G + +++TG
Sbjct: 180 XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 95 IGFGSFGPVYKGLLR----DTVVAIK-RRVGSPR---QEFVAEVTYLSEIRHRNLVTLLG 146
+G G+FG V +G+ R VAIK + G+ + +E + E + ++ + +V L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 147 YCQQNGYQMLVFEYLPNGSMCNHLYETG----LESSTKLEFKQRVSIALGAAKGLCHLHS 202
CQ MLV E G + H + G + S E +VS+ G+ +L
Sbjct: 78 VCQAEAL-MLVMEMAGGGPL--HKFLVGKREEIPVSNVAELLHQVSM------GMKYLEE 128
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISKLL--ENIEEAGPSHGSIVNVFRDPEVEE 260
VH++ NVL+ AK++D G+SK L ++ S G + PE
Sbjct: 129 KN--FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 186
Query: 261 SGVFSEMSDIYSFGVFLLE-LVTGQE 285
FS SD++S+GV + E L GQ+
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALSYGQK 212
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 128 AEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL-ESSTKLEFKQR 186
AE L E++H +V L+ Q G L+ EYL G + L G+ T +
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE 129
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+S+ALG HLH + +++++ K N++++ K+ D G+ K E+I + +H
Sbjct: 130 ISMALG------HLH--QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTH 179
Query: 247 GSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ + PE+ + D +S G + +++TG
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 123 RQEFVAEVTYLSEIR-HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL 181
R+ + EV L ++ H N++ L + N + LVF+ + G + ++L E L
Sbjct: 54 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-----KVTL 108
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
K+ I + +C LH L +VH++ K N+L+D++ K+ D G S L+ E+
Sbjct: 109 SEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK 166
Query: 242 AGPSHGSIVNVFRDPEVEESGV------FSEMSDIYSFGVFLLELVTG 283
G+ + PE+ E + + + D++S GV + L+ G
Sbjct: 167 LREVCGT--PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR--VGSPRQEFVA-EVTYLSEIRHRNL 141
K+++ IG G+ G VY + T VAI++ P++E + E+ + E ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V L +V EYL GS+ + + ET ++ Q ++ + L LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLH 133
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
S + ++H++ K+ N+L+ + K+ D G + E++ S + PEV
Sbjct: 134 SNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSXMVGTPYWMAPEVVTR 190
Query: 262 GVFSEMSDIYSFGVFLLELVTGQ 284
+ DI+S G+ +E++ G+
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 123 RQEFVAEVTYLSEIRHRNLVTLLGYC--QQNGYQMLVFEYLPNGSMCNHLYE-TGLESST 179
+Q V+EV L E++H N+V + N +V EY G + + + + T
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 180 KLEFKQRVSIALGAAKGLCHLHSLK-PPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
EF RV L A CH S ++H++ K ANV +D K+ D G++++L N
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-N 167
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLEL 280
+ + + PE ++E SDI+S G L EL
Sbjct: 168 HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 123 RQEFVAEVTYLSEIRHRNLVTLLGYC--QQNGYQMLVFEYLPNGSMCNHLYE-TGLESST 179
+Q V+EV L E++H N+V + N +V EY G + + + + T
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 180 KLEFKQRVSIALGAAKGLCHLHSLK-PPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
EF RV L A CH S ++H++ K ANV +D K+ D G++++L N
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-N 167
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLEL 280
+ + + PE ++E SDI+S G L EL
Sbjct: 168 HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRV------GSPRQEFVAEVTYLSEI 136
E F + S +G G+ G V+K + + + + R++ + R + + E+ L E
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
+V G +G + E++ GS+ L + G L +VSIA+ KG
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAV--IKG 143
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSHGSIVNVFRD 255
L +L K ++H++ K +N+LV+ K+ D G+S +L++++ + S +
Sbjct: 144 LTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS----YMS 198
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PE + +S SDI+S G+ L+E+ G+
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR--VGSPRQEFVA-EVTYLSEIRHRNL 141
K+++ IG G+ G VY + T VAI++ P++E + E+ + E ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
V L +V EYL GS+ + + ET ++ Q ++ + L LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLH 133
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
S + ++H++ K+ N+L+ + K+ D G + E++ S + PEV
Sbjct: 134 SNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSTMVGTPYWMAPEVVTR 190
Query: 262 GVFSEMSDIYSFGVFLLELVTGQ 284
+ DI+S G+ +E++ G+
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Query: 121 SPRQEFVAEVTYLSEI-RHRNLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLE-- 176
S + ++E+ L I H N+V LLG C + G M++ E+ G++ +L E
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Query: 177 -----SSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTG 231
L + + + AKG+ L S K +H++ N+L+ E + K+ D G
Sbjct: 132 PYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK--XIHRDLAARNILLSEKNVVKIXDFG 189
Query: 232 ISK-LLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+++ + ++ + + + PE V++ SD++SFGV L E+ +
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 123 RQEFVAEVTYLSEIR-HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL 181
R+ + EV L ++ H N++ L + N + LVF+ + G + ++L E L
Sbjct: 67 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-----KVTL 121
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
K+ I + +C LH L +VH++ K N+L+D++ K+ D G S L+ E+
Sbjct: 122 SEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK 179
Query: 242 AGPSHGSIVNVFRDPEVEESGV------FSEMSDIYSFGVFLLELVTG 283
G+ + PE+ E + + + D++S GV + L+ G
Sbjct: 180 LRSVCGT--PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 32/215 (14%)
Query: 88 QFSETSLIGFGSFGPVYKGLLR-DTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLG 146
F E LIG G FG V+K R D + +RV ++ EV L+++ H N+V G
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG 71
Query: 147 YCQQNGYQMLVFEYLPNGS-----------------MCNH-LYETGLESSTKLEFKQRVS 188
C F+Y P S C+ E +E + + ++
Sbjct: 72 -CWDG------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 189 IAL--GAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+ L KG+ ++HS K L++++ K +N+ + + K+ D G+ L+N + S
Sbjct: 125 LELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK 182
Query: 247 GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELV 281
G++ + PE S + + D+Y+ G+ L EL+
Sbjct: 183 GTL--RYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRV------GSPRQEFVAEVTYLSEI 136
E F + S +G G+ G V+K + + + + R++ + R + + E+ L E
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
+V G +G + E++ GS+ L + G L +VSIA+ KG
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAV--IKG 178
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSHGSIVNVFRD 255
L +L K ++H++ K +N+LV+ K+ D G+S +L++++ + S +
Sbjct: 179 LTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS----YMS 233
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PE + +S SDI+S G+ L+E+ G+
Sbjct: 234 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 123 RQEFVAEVTYLSEIR-HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKL 181
R+ + EV L ++ H N++ L + N + LVF+ + G + ++L E L
Sbjct: 67 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-----KVTL 121
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
K+ I + +C LH L +VH++ K N+L+D++ K+ D G S L+ E+
Sbjct: 122 SEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK 179
Query: 242 AGPSHGSIVNVFRDPEVEESGV------FSEMSDIYSFGVFLLELVTG 283
G+ + PE+ E + + + D++S GV + L+ G
Sbjct: 180 LREVCGT--PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 53/273 (19%)
Query: 94 LIGFGSFGPVYKGLLRDTV--------VAIKRRVG--SPRQEFVAEVTYLSEIRHRNLVT 143
++G GSFG V L +D + V KR+V + ++ + EV L ++ H N+
Sbjct: 33 VLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
L + + GY LV E G + + + S + I G+ + H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQVLSGITYXH-- 143
Query: 204 KPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEE 260
K +VH++ K N+L++ ++ ++ D G+S E ++ G+ + PEV
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIA--PEVLH 201
Query: 261 SGVFSEMSDIYSFGVFLLELVTG---------QEASHIVSLGSYE-ALIQWVR------- 303
G + E D++S GV L L++G + V G Y L QW +
Sbjct: 202 -GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 260
Query: 304 -----------SRLSSNNFVDHRLAGTFTTEGM 325
R+S+ + +DH T+T E +
Sbjct: 261 LIRKXLTYVPSXRISARDALDHEWIQTYTKEQI 293
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 81 ELEQATKQFSETSLIGFGSFGPVYKGLLRDT-----VVAIKRRVGSPRQEF---VAEVTY 132
+++ + F ++G GSFG V+ + T + A+K+ V + + E
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 133 LS-EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIAL 191
LS H L + Q V EYL G + H+ +S K + + A
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-----QSCHKFDLSRATFYAA 125
Query: 192 GAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN-IEEAGPSHGSIV 250
GL LHS +V+++ K N+L+D++ K+AD G+ K EN + +A +
Sbjct: 126 EIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGT 181
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ PE+ ++ D +SFGV L E++ GQ H
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 219
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 95 IGFGSFGPV-----YKGLLRDTVVAIKRRV---GSPRQEFVAEVTYLSEIRHRNLVTLLG 146
+G GSFG V YK + + I R++ E++YL +RH +++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 147 YCQQNGYQMLVFEYLPNGSMCNHLYETG--LESSTKLEFKQRVSIALGAAKGLCHLHSLK 204
++V EY G + +++ E E + F+Q + A CH H +
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQII-----CAIEYCHRHKI- 129
Query: 205 PPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVF 264
VH++ K N+L+D+N K+AD G+S ++ + S GS + PEV ++
Sbjct: 130 ---VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGS--PNYAAPEVINGKLY 184
Query: 265 S-EMSDIYSFGVFLLELVTGQ 284
+ D++S G+ L ++ G+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGR 205
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF IG GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+P G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ KVAD G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 27/229 (11%)
Query: 78 SMEELEQATKQFSETSL------IGFGSFGPVYKGLLRDTVVAIKRRVGSPRQE-----F 126
SM++ E T+ + +G G+FG VYK ++T V +V + E +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 127 VAEVTYLSEIRHRNLVTLL-GYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
+ E+ L+ H N+V LL + +N +L+ E+ G++ + LE L Q
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVM----LELERPLTESQ 136
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGP 244
+ L +LH K ++H++ K N+L + K+AD G+S K I+
Sbjct: 137 IQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 194
Query: 245 SHGSIVNVFRDPEV-----EESGVFSEMSDIYSFGVFLLELVTGQEASH 288
G+ + PEV + + +D++S G+ L+E+ + H
Sbjct: 195 FIGT--PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 84 QATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFVA--------EVTYLSE 135
+ + F +L+G GSF VY+ T + + ++ + + A EV +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
++H +++ L Y + + Y LV E NG M N + ++ ++ E + + +
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMHQII---T 123
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
G+ +LHS ++H++ +N+L+ N K+AD G++ L+ E + N +
Sbjct: 124 GMLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPN-YIS 180
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PE+ SD++S G L+ G+
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 37/239 (15%)
Query: 61 SSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR 118
++ P GP ++ S +++T +IG GSFG VY+ L D+ +VAIK+
Sbjct: 4 TTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV 53
Query: 119 VGSPRQEFV-AEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCNHLY 171
+ + F E+ + ++ H N+V L + +G Y LV +Y+P +Y
Sbjct: 54 LQG--KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPAT-----VY 106
Query: 172 ETGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFIAKV 227
S + + + L + L ++HS + H++ K N+L+D + + K+
Sbjct: 107 RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKL 164
Query: 228 ADTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
D G +K L E P+ I + +R PE+ ++ D++S G L EL+ GQ
Sbjct: 165 CDFGSAKQLVRGE---PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 61 SSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR 118
++ P GP ++ S +++T +IG GSFG VY+ L D+ +VAIK +
Sbjct: 4 TTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-K 52
Query: 119 VGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCNHLYE 172
V + E+ + ++ H N+V L + +G Y LV +Y+P +Y
Sbjct: 53 VLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-----VYR 107
Query: 173 TGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFIAKVA 228
S + + + L + L ++HS + H++ K N+L+D + + K+
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 165
Query: 229 DTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
D G +K L E P+ I + +R PE+ ++ D++S G L EL+ GQ
Sbjct: 166 DFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 86 TKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEF----VAEVTYLSEIRHR 139
+ F SL+G G++G V + T +VAIK+ + F + E+ L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYE---TGLESSTKLEFKQRVSIALGAAKG 196
N++T+ + + ++ Y+ M L+ T + S +++ + L A K
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY--FIYQTLRAVKV 127
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL-----ENIEEAGPSHGSIVN 251
L H ++H++ K +N+L++ N KV D G+++++ +N E G G +
Sbjct: 128 L---HGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 252 V----FRDPEVE-ESGVFSEMSDIYSFGVFLLEL 280
V +R PEV S +S D++S G L EL
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 61 SSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRR 118
++ P GP ++ S +++T +IG GSFG VY+ L D+ +VAIK +
Sbjct: 4 TTVVATPGQGPDRPQEVS----------YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-K 52
Query: 119 VGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNG------YQMLVFEYLPNGSMCNHLYE 172
V + E+ + ++ H N+V L + +G Y LV +Y+P +Y
Sbjct: 53 VLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-----VYR 107
Query: 173 TGLESSTKLEFKQRVSIALGAA---KGLCHLHSLKPPLVHKNFKTANVLVD-ENFIAKVA 228
S + + + L + L ++HS + H++ K N+L+D + + K+
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 165
Query: 229 DTGISKLLENIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
D G +K L E P+ I + +R PE+ ++ D++S G L EL+ GQ
Sbjct: 166 DFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 27/229 (11%)
Query: 78 SMEELEQATKQFSETSL------IGFGSFGPVYKGLLRDTVVAIKRRVGSPRQE-----F 126
SM++ E T+ + +G G+FG VYK ++T V +V + E +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 127 VAEVTYLSEIRHRNLVTLL-GYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
+ E+ L+ H N+V LL + +N +L+ E+ G++ + LE L Q
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVM----LELERPLTESQ 136
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGP 244
+ L +LH K ++H++ K N+L + K+AD G+S K I+
Sbjct: 137 IQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS 194
Query: 245 SHGSIVNVFRDPEV-----EESGVFSEMSDIYSFGVFLLELVTGQEASH 288
G+ + PEV + + +D++S G+ L+E+ + H
Sbjct: 195 FIGT--PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 27/229 (11%)
Query: 78 SMEELEQATKQFSETSL------IGFGSFGPVYKGLLRDTVVAIKRRVGSPRQE-----F 126
SM++ E T+ + +G G+FG VYK ++T V +V + E +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 127 VAEVTYLSEIRHRNLVTLL-GYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQ 185
+ E+ L+ H N+V LL + +N +L+ E+ G++ + LE L Q
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVM----LELERPLTESQ 136
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGP 244
+ L +LH K ++H++ K N+L + K+AD G+S K I+
Sbjct: 137 IQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDX 194
Query: 245 SHGSIVNVFRDPEV-----EESGVFSEMSDIYSFGVFLLELVTGQEASH 288
G+ + PEV + + +D++S G+ L+E+ + H
Sbjct: 195 FIGT--PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 21/199 (10%)
Query: 95 IGFGSFGPVY--KGLLRDTVVAIK-----RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
IG G+F V + +L VA+K + S Q+ EV + + H N+V L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
+ LV EY G + ++L G E + +F+Q VS A CH +
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS-----AVQYCH----QK 125
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFS 265
+VH++ K N+L+D + K+AD G S + GS + PE+ + +
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGS--PPYAAPELFQGKKYD 183
Query: 266 -EMSDIYSFGVFLLELVTG 283
D++S GV L LV+G
Sbjct: 184 GPEVDVWSLGVILYTLVSG 202
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
++++ IG G++G V +R T VAIK+ Q + + E+ L RH N+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + + Y+ M LY+ L S +L +GL ++H
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYK--LLKSQQLSNDHICYFLYQILRGLKYIH 161
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 162 SAN--VLHRDLKPSNLLINTTCDLKICDFGLARI------ADPEHDHTGFLTEXVATRWY 213
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIKR---RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
IG GS G V +R + +VA+K+ R R+ EV + + +H N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+V E+L G++ T + + T++ +Q ++ L + L LH+ ++H
Sbjct: 99 VGDELWVVMEFLEGGAL------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG--VIH 150
Query: 210 KNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSEM 267
++ K+ ++L+ + K++D G + + P +V + PE+ +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCA---QVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 268 SDIYSFGVFLLELVTGQ 284
DI+S G+ ++E+V G+
Sbjct: 208 VDIWSLGIMVIEMVDGE 224
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 21/199 (10%)
Query: 95 IGFGSFGPVY--KGLLRDTVVAIK-----RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
IG G+F V + +L VA+K + S Q+ EV + + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
+ LV EY G + ++L G E + +F+Q VS A CH +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCH----QK 132
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFS 265
+VH++ K N+L+D + K+AD G S + GS + PE+ + +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGS--PPYAAPELFQGKKYD 190
Query: 266 -EMSDIYSFGVFLLELVTG 283
D++S GV L LV+G
Sbjct: 191 GPEVDVWSLGVILYTLVSG 209
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIKR---RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
IG GS G V +R + +VA+K+ R R+ EV + + +H N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+V E+L G++ T + + T++ +Q ++ L + L LH+ ++H
Sbjct: 92 VGDELWVVMEFLEGGAL------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG--VIH 143
Query: 210 KNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSEM 267
++ K+ ++L+ + K++D G + + P +V + PE+ +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCA---QVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 268 SDIYSFGVFLLELVTGQ 284
DI+S G+ ++E+V G+
Sbjct: 201 VDIWSLGIMVIEMVDGE 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 86 TKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEF----VAEVTYLSEIRHR 139
+ F SL+G G++G V + T +VAIK+ + F + E+ L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYE---TGLESSTKLEFKQRVSIALGAAKG 196
N++T+ + + ++ Y+ M L+ T + S +++ + L A K
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY--FIYQTLRAVKV 127
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL-----ENIEEAGPSHGSIVN 251
L H ++H++ K +N+L++ N KV D G+++++ +N E G G
Sbjct: 128 L---HGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 252 V----FRDPEVE-ESGVFSEMSDIYSFGVFLLEL 280
V +R PEV S +S D++S G L EL
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIKR---RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
IG GS G V +R + +VA+K+ R R+ EV + + +H N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+V E+L G++ T + + T++ +Q ++ L + L LH+ ++H
Sbjct: 97 VGDELWVVMEFLEGGAL------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG--VIH 148
Query: 210 KNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSEM 267
++ K+ ++L+ + K++D G + + P +V + PE+ +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCA---QVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 268 SDIYSFGVFLLELVTGQ 284
DI+S G+ ++E+V G+
Sbjct: 206 VDIWSLGIMVIEMVDGE 222
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 21/199 (10%)
Query: 95 IGFGSFGPVY--KGLLRDTVVAIK-----RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
IG G+F V + +L VA+K + S Q+ EV + + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
+ LV EY G + ++L G E + +F+Q VS A CH +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCH----QK 132
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFS 265
+VH++ K N+L+D + K+AD G S + GS + PE+ + +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGS--PPYAAPELFQGKKYD 190
Query: 266 -EMSDIYSFGVFLLELVTG 283
D++S GV L LV+G
Sbjct: 191 GPEVDVWSLGVILYTLVSG 209
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIKR---RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
IG GS G V +R + +VA+K+ R R+ EV + + +H N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+V E+L G++ T + + T++ +Q ++ L + L LH+ ++H
Sbjct: 88 VGDELWVVMEFLEGGAL------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG--VIH 139
Query: 210 KNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSEM 267
++ K+ ++L+ + K++D G + + P +V + PE+ +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCA---QVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 268 SDIYSFGVFLLELVTGQ 284
DI+S G+ ++E+V G+
Sbjct: 197 VDIWSLGIMVIEMVDGE 213
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 46/232 (19%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKR-----RVGSPRQEFVAEVTYLSEIR-H 138
+++ +G G++G V+K + R T VVA+K+ + + Q E+ L+E+ H
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH 68
Query: 139 RNLVTLLGYCQQNGYQ--MLVFEYLPNGSMCNHLYETGLESSTK---LEFKQRVSIALGA 193
N+V LL + + + LVF+Y+ ET L + + LE + +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYM----------ETDLHAVIRANILEPVHKQYVVYQL 118
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL----------------- 236
K + +LHS L+H++ K +N+L++ KVAD G+S+
Sbjct: 119 IKVIKYLHS--GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 237 -ENIEEAGPSHGSIVNV--FRDPEV-EESGVFSEMSDIYSFGVFLLELVTGQ 284
EN ++ P V +R PE+ S +++ D++S G L E++ G+
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 87 KQFSETSLIGFGSFGPVY--KGLLRDTVVAIKRRVGSP---RQEFVAEVTYLSEIRHRNL 141
K F ++G G+F V+ K L + A+K SP E+ L +I+H N+
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI 68
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCH 199
VTL + + LV + + G + + + E G+ E L +Q L A K +
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ----VLSAVK---Y 121
Query: 200 LHSLKPPLVHKNFKTANVLV---DENFIAKVADTGISKLLEN--IEEAGPSHGSIVNVFR 254
LH + +VH++ K N+L +EN + D G+SK+ +N + A + G +
Sbjct: 122 LH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVA---- 175
Query: 255 DPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PEV +S+ D +S GV L+ G
Sbjct: 176 -PEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIKR---RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
IG GS G V +R + +VA+K+ R R+ EV + + +H N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+V E+L G++ T + + T++ +Q ++ L + L LH+ ++H
Sbjct: 219 VGDELWVVMEFLEGGAL------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG--VIH 270
Query: 210 KNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSEM 267
++ K+ ++L+ + K++D G + + P +V + PE+ +
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 268 SDIYSFGVFLLELVTGQ 284
DI+S G+ ++E+V G+
Sbjct: 328 VDIWSLGIMVIEMVDGE 344
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRV------GSPRQEFVAEVTYLSEI 136
E F S +G G+ G V K R + + + R++ + R + + E+ L E
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
+V G +G + E++ GS+ L E E +VSIA+ +G
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA---KRIPEEILGKVSIAV--LRG 126
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENIEEAGPSHGSIVNVFRD 255
L +L K ++H++ K +N+LV+ K+ D G+S +L++++ + S +
Sbjct: 127 LAYLRE-KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS----YMA 181
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PE + +S SDI+S G+ L+EL G+
Sbjct: 182 PERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 95 IGFGSFGPVY--KGLLRDTVVAIK-----RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
IG G+F V + +L VA+K + S Q+ EV + + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
+ LV EY G + ++L G E + +F+Q VS A CH +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCH----QK 132
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF------RDPEVE 259
+VH++ K N+L+D + K+AD G S + G+ ++ F PE+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEF--------TFGNKLDAFCGAPPYAAPELF 184
Query: 260 ESGVFS-EMSDIYSFGVFLLELVTG 283
+ + D++S GV L LV+G
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIKR---RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
IG GS G V +R + +VA+K+ R R+ EV + + +H N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+V E+L G++ T + + T++ +Q ++ L + L LH+ ++H
Sbjct: 142 VGDELWVVMEFLEGGAL------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG--VIH 193
Query: 210 KNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSEM 267
++ K+ ++L+ + K++D G + + P +V + PE+ +
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCA---QVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 268 SDIYSFGVFLLELVTGQ 284
DI+S G+ ++E+V G+
Sbjct: 251 VDIWSLGIMVIEMVDGE 267
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 86 TKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEF----VAEVTYLSEIRHR 139
+ F SL+G G++G V + T +VAIK+ + F + E+ L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYE---TGLESSTKLEFKQRVSIALGAAKG 196
N++T+ + + ++ Y+ M L+ T + S +++ + L A K
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY--FIYQTLRAVKV 127
Query: 197 LCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL-----ENIEEAGPSHGSIVN 251
L H ++H++ K +N+L++ N KV D G+++++ +N E G G
Sbjct: 128 L---HGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 252 V----FRDPEVE-ESGVFSEMSDIYSFGVFLLEL 280
V +R PEV S +S D++S G L EL
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQR 186
E++YL +RH +++ L + ++V EY N + +++ + E + F+Q
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI 116
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+S A CH H + VH++ K N+L+DE+ K+AD G+S ++ + S
Sbjct: 117 IS-----AVEYCHRHKI----VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 167
Query: 247 GSIVNVFRDPEVEESGVFS-EMSDIYSFGVFL 277
GS + PEV +++ D++S GV L
Sbjct: 168 GS--PNYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQR 186
E++YL +RH +++ L + ++V EY N + +++ + E + F+Q
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI 121
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+S A CH H + VH++ K N+L+DE+ K+AD G+S ++ + S
Sbjct: 122 IS-----AVEYCHRHKI----VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 172
Query: 247 GSIVNVFRDPEVEESGVFS-EMSDIYSFGVFL 277
GS + PEV +++ D++S GV L
Sbjct: 173 GS--PNYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQR 186
E++YL +RH +++ L + ++V EY N + +++ + E + F+Q
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI 112
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+S A CH H + VH++ K N+L+DE+ K+AD G+S ++ + S
Sbjct: 113 IS-----AVEYCHRHKI----VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 163
Query: 247 GSIVNVFRDPEVEESGVFS-EMSDIYSFGVFL 277
GS + PEV +++ D++S GV L
Sbjct: 164 GS--PNYAAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQR 186
E++YL +RH +++ L + ++V EY N + +++ + E + F+Q
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI 122
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+S A CH H + VH++ K N+L+DE+ K+AD G+S ++ + S
Sbjct: 123 IS-----AVEYCHRHKI----VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 173
Query: 247 GSIVNVFRDPEVEESGVFS-EMSDIYSFGVFL 277
GS + PEV +++ D++S GV L
Sbjct: 174 GS--PNYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 82 LEQATKQFSETSLIGFGSFGPVYKGLLRD-----TVVAIKR-RV-----GSPRQEF--VA 128
L +A +Q+ + IG G++G V+K RD VA+KR RV G P VA
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 129 EVTYLSEIRHRNLVTLLGYC-----QQNGYQMLVFEYLPNG--SMCNHLYETGLESSTKL 181
+ +L H N+V L C + LVFE++ + + + E G+ + T
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
+ + +GL LHS + +VH++ K N+LV + K+AD G++++ +
Sbjct: 124 D------MMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--Q 173
Query: 242 AGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLEL 280
+ + +R PEV ++ D++S G E+
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 82 LEQATKQFSETSLIGFGSFGPVYKGLLRD-----TVVAIKR-RV-----GSPRQEF--VA 128
L +A +Q+ + IG G++G V+K RD VA+KR RV G P VA
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 129 EVTYLSEIRHRNLVTLLGYC-----QQNGYQMLVFEYLPNG--SMCNHLYETGLESSTKL 181
+ +L H N+V L C + LVFE++ + + + E G+ + T
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
+ + +GL LHS + +VH++ K N+LV + K+AD G++++ +
Sbjct: 124 D------MMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--Q 173
Query: 242 AGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLEL 280
+ + +R PEV ++ D++S G E+
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 82 LEQATKQFSETSLIGFGSFGPVYKGLLRD-----TVVAIKR-RV-----GSPRQEF--VA 128
L +A +Q+ + IG G++G V+K RD VA+KR RV G P VA
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 129 EVTYLSEIRHRNLVTLLGYC-----QQNGYQMLVFEYLPNG--SMCNHLYETGLESSTKL 181
+ +L H N+V L C + LVFE++ + + + E G+ + T
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
+ + +GL LHS + +VH++ K N+LV + K+AD G++++ +
Sbjct: 124 D------MMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--Q 173
Query: 242 AGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLEL 280
+ + +R PEV ++ D++S G E+
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDT--VVAIK----RRVGSPRQEFVA--EVTYLSEIRHRN 140
FS +IG G FG VY DT + A+K +R+ + E +A E LS + +
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 141 --LVTLLGYCQQNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ + Y ++ + + + G + HL + G+ S + F A GL
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIILGL 304
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI-VNVFRDP 256
H+H+ +V+++ K AN+L+DE+ +++D G++ + + P H S+ + + P
Sbjct: 305 EHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKP-HASVGTHGYMAP 358
Query: 257 EVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
EV + GV + +D +S G L +L+ G
Sbjct: 359 EVLQKGVAYDSSADWFSLGCMLFKLLRGH 387
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 21/199 (10%)
Query: 95 IGFGSFGPVY--KGLLRDTVVAIK-----RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
IG G+F V + +L VA++ + S Q+ EV + + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
+ LV EY G + ++L G E + +F+Q VS A CH +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCH----QK 132
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFS 265
+VH++ K N+L+D + K+AD G S + GS + PE+ + +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGS--PPYAAPELFQGKKYD 190
Query: 266 -EMSDIYSFGVFLLELVTG 283
D++S GV L LV+G
Sbjct: 191 GPEVDVWSLGVILYTLVSG 209
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDT--VVAIK----RRVGSPRQEFVA--EVTYLSEIRHRN 140
FS +IG G FG VY DT + A+K +R+ + E +A E LS + +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 141 --LVTLLGYCQQNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ + Y ++ + + + G + HL + G+ S + F A GL
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIILGL 305
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI-VNVFRDP 256
H+H+ +V+++ K AN+L+DE+ +++D G++ + + P H S+ + + P
Sbjct: 306 EHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKP-HASVGTHGYMAP 359
Query: 257 EVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
EV + GV + +D +S G L +L+ G
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKL 181
Q+ EV + + H N+V L + LV EY G + ++L G E +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
+F+Q VS A CH + +VH++ K N+L+D + K+AD G S +
Sbjct: 118 KFRQIVS-----AVQYCH----QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK 168
Query: 242 AGPSHGSIVNVFRDPEVEESGVFS-EMSDIYSFGVFLLELVTG 283
GS + PE+ + + D++S GV L LV+G
Sbjct: 169 LDEFCGS--PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDT--VVAIK----RRVGSPRQEFVA--EVTYLSEIRHRN 140
FS +IG G FG VY DT + A+K +R+ + E +A E LS + +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 141 --LVTLLGYCQQNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ + Y ++ + + + G + HL + G+ S + F A GL
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIILGL 305
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI-VNVFRDP 256
H+H+ +V+++ K AN+L+DE+ +++D G++ + + P H S+ + + P
Sbjct: 306 EHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKP-HASVGTHGYMAP 359
Query: 257 EVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
EV + GV + +D +S G L +L+ G
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDT--VVAIK----RRVGSPRQEFVA--EVTYLSEIRHRN 140
FS +IG G FG VY DT + A+K +R+ + E +A E LS + +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 141 --LVTLLGYCQQNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
+ + Y ++ + + + G + HL + G+ S + F A GL
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIILGL 305
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI-VNVFRDP 256
H+H+ +V+++ K AN+L+DE+ +++D G++ + + P H S+ + + P
Sbjct: 306 EHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKP-HASVGTHGYMAP 359
Query: 257 EVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
EV + GV + +D +S G L +L+ G
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 88 QFSETSLIGFGSFGPVYKG--LLRDTVVAIK--RRVGSPRQEFVAEVTYLSEIRH----- 138
F E +++G G+FG V K L AIK R ++EV L+ + H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 139 --------RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIA 190
RN V + ++ + EY NG++ + ++ L + + E+ +
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL-NQQRDEYWRLFRQI 125
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL-----------ENI 239
L A L ++HS ++H++ K N+ +DE+ K+ D G++K + +N+
Sbjct: 126 LEA---LSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 240 EEAGPSHGSIVN--VFRDPEV-EESGVFSEMSDIYSFGVFLLELV----TGQEASHIV 290
+ + S + ++ EV + +G ++E D+YS G+ E++ TG E +I+
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNIL 238
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 18/197 (9%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIKR---RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
IG GS G V + T VA+K+ R R+ EV + + H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+V E+L G++ T + + T++ +Q ++ L + L +LH+ ++H
Sbjct: 113 VGDELWVVMEFLEGGAL------TDIVTHTRMNEEQIATVCLSVLRALSYLHNQG--VIH 164
Query: 210 KNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSEM 267
++ K+ ++L+ + K++D G + + P +V + PEV +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCA---QVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 268 SDIYSFGVFLLELVTGQ 284
DI+S G+ ++E++ G+
Sbjct: 222 VDIWSLGIMVIEMIDGE 238
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 73
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 125
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKL 181
Q+ EV + + H N+V L + LV EY G + ++L G E +
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 118
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
+F+Q VS A CH + +VH++ K N+L+D + K+AD G S +
Sbjct: 119 KFRQIVS-----AVQYCH----QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK 169
Query: 242 AGPSHGSIVNVFRDPEVEESGVFS-EMSDIYSFGVFLLELVTG 283
GS + PE+ + + D++S GV L LV+G
Sbjct: 170 LDTFCGS--PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 73
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 125
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 73
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 125
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 72
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 124
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 73
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 125
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINAMLNHENVVKFYGH 73
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 125
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVS 188
E+ L +I+H N+V L + G+ L+ + + G + + + E G T+ + + +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIF 123
Query: 189 IALGAAKGLCHLHSLKPPLVHKNFKTANVL---VDENFIAKVADTGISKLLENIEEAGPS 245
L A K +LH L +VH++ K N+L +DE+ ++D G+SK+ E+ G
Sbjct: 124 QVLDAVK---YLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSV 174
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ + PEV +S+ D +S GV L+ G
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 71
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 123
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 124 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGE 203
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVS 188
E+ L +I+H N+V L + G+ L+ + + G + + + E G T+ + + +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIF 123
Query: 189 IALGAAKGLCHLHSLKPPLVHKNFKTANVL---VDENFIAKVADTGISKLLENIEEAGPS 245
L A K +LH L +VH++ K N+L +DE+ ++D G+SK+ E+ G
Sbjct: 124 QVLDAVK---YLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSV 174
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ + PEV +S+ D +S GV L+ G
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVS 188
E+ L +I+H N+V L + G+ L+ + + G + + + E G T+ + + +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIF 123
Query: 189 IALGAAKGLCHLHSLKPPLVHKNFKTANVL---VDENFIAKVADTGISKLLENIEEAGPS 245
L A K +LH L +VH++ K N+L +DE+ ++D G+SK+ E+ G
Sbjct: 124 QVLDAVK---YLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSV 174
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ + PEV +S+ D +S GV L+ G
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 72
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 124
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVS 188
E+ L +I+H N+V L + G+ L+ + + G + + + E G T+ + + +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIF 123
Query: 189 IALGAAKGLCHLHSLKPPLVHKNFKTANVL---VDENFIAKVADTGISKLLENIEEAGPS 245
L A K +LH L +VH++ K N+L +DE+ ++D G+SK+ E+ G
Sbjct: 124 QVLDAVK---YLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSV 174
Query: 246 HGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ + PEV +S+ D +S GV L+ G
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 78/264 (29%)
Query: 95 IGFGSFGPVYK----GLLRDTV---VAIKR-RVGSPRQEFVA---EVTYLSEI-RHRNLV 142
+G G+FG V + G+ + VA+K + G+ E+ A E+ L+ I H N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 143 TLLGYC-QQNGYQMLVFEYLPNGSMCNHL-----------------------YETGLESS 178
LLG C +Q G M++ EY G++ N+L E GLE
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQG 154
Query: 179 TKLE---------------------------------FKQRVSI------ALGAAKGLCH 199
K +K+ +++ + A+G+
Sbjct: 155 KKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEF 214
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISK-LLENIEEAGPSHGSIVNVFRDPEV 258
L S K +H++ N+L+ EN + K+ D G+++ + +N + + + PE
Sbjct: 215 LSSRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPES 272
Query: 259 EESGVFSEMSDIYSFGVFLLELVT 282
++S SD++S+GV L E+ +
Sbjct: 273 IFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 73
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 125
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 25/201 (12%)
Query: 95 IGFGSFGPVY--KGLLRDTVVAIK-----RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
IG G+F V + +L VAIK + + Q+ EV + + H N+V L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
+ L+ EY G + ++L G E + +F+Q VS A CH +
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-----AVQYCH----QK 133
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEESGV 263
+VH++ K N+L+D + K+AD G S N G + + PE+ +
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFS----NEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 264 FS-EMSDIYSFGVFLLELVTG 283
+ D++S GV L LV+G
Sbjct: 190 YDGPEVDVWSLGVILYTLVSG 210
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 124 QEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKL 181
Q+ EV + + H N+V L + L+ EY G + ++L G E +
Sbjct: 56 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 115
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
+F+Q VS A CH + +VH++ K N+L+D + K+AD G S +
Sbjct: 116 KFRQIVS-----AVQYCH----QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 166
Query: 242 AGPSHGSIVNVFRDPEVEESGVFS-EMSDIYSFGVFLLELVTG 283
GS + PE+ + + D++S GV L LV+G
Sbjct: 167 LDTFCGS--PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNHENVVKFYGH 72
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 124
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 72
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 124
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 72
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 124
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 72
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 124
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 33/216 (15%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGLLRDT----VVAIKRRVGSPRQE------FVAEVTYLS 134
AT ++ + IG G++G VYK RD VA+K V P E V EV L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKS-VRVPNGEEGLPISTVREVALLR 58
Query: 135 EIR---HRNLVTLLGYCQQNGYQ-----MLVFEYLPNG--SMCNHLYETGLESSTKLEFK 184
+ H N+V L+ C + LVFE++ + + GL + T +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 185 QRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGP 244
++ +GL LH+ +VH++ K N+LV K+AD G++++ P
Sbjct: 119 RQF------LRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP 170
Query: 245 SHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLEL 280
+ +R PEV ++ D++S G E+
Sbjct: 171 V--VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 29/212 (13%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQ------EFVAEVTYLSEIR 137
K++ + IG G+ G V DTV+ I +++ P Q E+ L +
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAF--DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 79
Query: 138 HRNLVTLLG-YCQQNGYQ-----MLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIAL 191
H+N+++LL + Q + LV E L + ++C ++ +L+ ++ +
Sbjct: 80 HKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIH-------MELDHERMSYLLY 131
Query: 192 GAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVN 251
G+ HLHS ++H++ K +N++V + K+ D G+++ P +
Sbjct: 132 QMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPY--VVTR 187
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+R PEV + E DI+S G + ELV G
Sbjct: 188 YYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNHENVVKFYGH 73
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 125
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFVAEVTY-----LSEIRHR 139
K + + +G G++G V + + + VAIK+ + E A+ Y L ++H
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNH--------LYETGLESSTKLEFKQRV--SI 189
N++ LL + P S+ N +T L+ +EF + +
Sbjct: 102 NVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYL 149
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI 249
KGL ++HS +VH++ K N+ V+E+ K+ D G+++ +A + +
Sbjct: 150 VYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARH----ADAEMTGYVV 203
Query: 250 VNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+R PEV S + +++ DI+S G + E++TG+
Sbjct: 204 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNHENVVKFYGH 72
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 124
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 72
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 124
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 72
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 124
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 73
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 125
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 23/209 (11%)
Query: 94 LIG-FGSFGPVYKGLLRDTVVAIKRRVGSPRQE-----FVAEVTYLSEIRHRNLVTLL-G 146
+IG G FG VYK ++T V +V + E ++ E+ L+ H N+V LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 147 YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPP 206
+ +N +L+ E+ G++ + LE L Q + L +LH K
Sbjct: 76 FYYENNLWILI-EFCAGGAVDAVM----LELERPLTESQIQVVCKQTLDALNYLHDNK-- 128
Query: 207 LVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEV-----E 259
++H++ K N+L + K+AD G+S +N S + + PEV
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTXIQRRDSFIGTPYWMAPEVVMCETS 186
Query: 260 ESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ + +D++S G+ L+E+ + H
Sbjct: 187 KDRPYDYKADVWSLGITLIEMAEIEPPHH 215
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 72
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 124
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G++G V + R T +V +KR V P + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGH 72
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLY-ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
++ Q L EY G + + + + G+ E + F Q ++ G+ +LH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-------GVVYLHGIG- 124
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N+L+DE K++D G++ + N E + + PE+ + F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 265 -SEMSDIYSFGVFLLELVTGQ 284
+E D++S G+ L ++ G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + ++ + +
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA---- 98
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY P G M +HL G S F A
Sbjct: 99 -VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 152
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ KVAD G +K ++ P + +
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLA--- 207
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 208 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 33/216 (15%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGLLRDT----VVAIKRRVGSPRQE------FVAEVTYLS 134
AT ++ + IG G++G VYK RD VA+K V P E V EV L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKS-VRVPNGEEGLPISTVREVALLR 58
Query: 135 EIR---HRNLVTLLGYCQQNGYQ-----MLVFEYLPNG--SMCNHLYETGLESSTKLEFK 184
+ H N+V L+ C + LVFE++ + + GL + T +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 185 QRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGP 244
++ +GL LH+ +VH++ K N+LV K+AD G++++ P
Sbjct: 119 RQF------LRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDP 170
Query: 245 SHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLEL 280
+ +R PEV ++ D++S G E+
Sbjct: 171 V--VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 36/231 (15%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N+++LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIISLLNVFTPQK-----TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 136
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 XGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR------TAGTSFMMTPYVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 234
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
H +++TL+ + + + LVF+ + G + ++L E L K+ SI + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAV 213
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL---ENIEEAGPSHGSIVNVFR 254
LH+ +VH++ K N+L+D+N +++D G S L E + E + G +
Sbjct: 214 SFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEIL 271
Query: 255 DPEVEESGV-FSEMSDIYSFGVFLLELVTG 283
++E+ + + D+++ GV L L+ G
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 33/205 (16%)
Query: 95 IGFGSFGPVY--KGLLRDTVVAIK-----RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
IG G+F V + +L VA+K + S Q+ EV + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
+ LV EY G + ++L G E + +F+Q VS A CH +
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS-----AVQYCH----QK 132
Query: 206 PLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF------RDPEVE 259
+VH++ K N+L+D + K+AD G S + G+ ++ F PE+
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEF--------TFGNKLDAFCGAPPYAAPELF 184
Query: 260 ESGVFS-EMSDIYSFGVFLLELVTG 283
+ + D++S GV L LV+G
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT------VVAIKRRVGSPRQ--EFVAEVTYLSEIRHR 139
QF +G GSFG V ++T + K++V +Q + E L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
LV L + N +V EY+P G M +HL G S F A +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEY 157
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVNVFRDP 256
LHSL L++++ K N+L+D+ +V D G +K ++ P + + P
Sbjct: 158 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA-------P 208
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTG 283
E+ S +++ D ++ GV + E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT------VVAIKRRVGSPRQ--EFVAEVTYLSEIRHR 139
QF +G GSFG V ++T + K++V +Q + E L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
LV L + N +V EY+P G M +HL G S F A +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEY 157
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVNVFRDP 256
LHSL L++++ K N+L+D+ +V D G +K ++ P + + P
Sbjct: 158 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA-------P 208
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTG 283
E+ S +++ D ++ GV + E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT------VVAIKRRVGSPRQ--EFVAEVTYLSEIRHR 139
QF +G GSFG V ++T + K++V +Q + E L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
LV L + N +V EY+P G M +HL G S F A +
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEY 156
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVNVFRDP 256
LHSL L++++ K N+L+D+ +V D G +K ++ P + + P
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA-------P 207
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTG 283
E+ S +++ D ++ GV + E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT------VVAIKRRVGSPRQ--EFVAEVTYLSEIRHR 139
QF +G GSFG V ++T + K++V +Q + E L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
LV L + N +V EY+P G M +HL G S F A +
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEY 156
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVNVFRDP 256
LHSL L++++ K N+L+D+ +V D G +K ++ P + + P
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA-------P 207
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTG 283
E+ S +++ D ++ GV + E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT------VVAIKRRVGSPRQ--EFVAEVTYLSEIRHR 139
QF +G GSFG V ++T + K++V +Q + E L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
LV L + N +V EY+P G M +HL G S F A +
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEY 156
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVNVFRDP 256
LHSL L++++ K N+L+D+ +V D G +K ++ P + + P
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA-------P 207
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTG 283
E+ S +++ D ++ GV + E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT------VVAIKRRVGSPRQ--EFVAEVTYLSEIRHR 139
QF +G GSFG V ++T + K++V +Q + E L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
LV L + N +V EY+P G M +HL G S F A +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEY 157
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVNVFRDP 256
LHSL L++++ K N+L+D+ +V D G +K ++ P + + P
Sbjct: 158 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA-------P 208
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTG 283
E+ S +++ D ++ GV + E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT------VVAIKRRVGSPRQ--EFVAEVTYLSEIRHR 139
QF +G GSFG V ++T + K++V +Q + E L +
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
LV L + N +V EY+P G M +HL G S F A +
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEY 177
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVNVFRDP 256
LHSL L++++ K N+L+D+ +V D G +K ++ P + + P
Sbjct: 178 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA-------P 228
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTG 283
E+ S +++ D ++ GV + E+ G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+P G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT------VVAIKRRVGSPRQ--EFVAEVTYLSEIRHR 139
QF +G GSFG V ++T + K++V +Q + E L +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
LV L + N +V EY+P G M +HL G S F A +
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEY 149
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVNVFRDP 256
LHSL L++++ K N+L+D+ +V D G +K ++ P + + P
Sbjct: 150 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA-------P 200
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTG 283
E+ S +++ D ++ GV + E+ G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 97
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+P G M +HL G S F A
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 152
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 207
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 208 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 109/227 (48%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ S +G G++G V T VA+K+ + P Q +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIH 60
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 61 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++
Sbjct: 121 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E AG +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 174 -EMAG---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVYKG--LLRDTVVAIK----RRVGSPRQEFVAEVTYL 133
++ ++ K + IG G F V +L +VAIK +GS E+ L
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIAL 191
+RH+++ L + +V EY P G + +++ E T++ F+Q VS
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVS--- 119
Query: 192 GAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVN 251
+ ++HS H++ K N+L DE K+ D G+ + ++
Sbjct: 120 ----AVAYVHS--QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSL 173
Query: 252 VFRDPE-VEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE ++ +D++S G+ L L+ G
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+P G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+P G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 97
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+P G M +HL G S F A
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 152
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLA--- 207
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 208 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 109/227 (48%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ S +G G++G V T VA+K+ + P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIH 64
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++
Sbjct: 125 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E AG +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 178 -EMAG---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT------VVAIKRRVGSPRQ--EFVAEVTYLSEIRHR 139
QF +G GSFG V ++T + K++V +Q + E L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
LV L + N +V EY P G M +HL G S F A +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEY 157
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVNVFRDP 256
LHSL L++++ K N+++D+ KV D G +K ++ P + + P
Sbjct: 158 LHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA-------P 208
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTG 283
E+ S +++ D ++ GV + E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 109/227 (48%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ S +G G++G V T VA+K+ + P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIH 64
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++
Sbjct: 125 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E AG +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 178 -EMAG---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ S +G G++G V T VA+K+ + P Q +
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIH 60
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 61 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTD 120
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++
Sbjct: 121 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 174 -EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 82
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+P G M +HL G S F A
Sbjct: 83 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 137
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 138 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLA--- 192
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 193 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K + + E L
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY P G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+++D+ KV D G++K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY P G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+++D+ KV D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFVAEVTY-----LSEIRHR 139
K + + +G G++G V + + + VAIK+ + E A+ Y L ++H
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNH--------LYETGLESSTKLEFKQRV--SI 189
N++ LL + P S+ N +T L+ L+F + +
Sbjct: 84 NVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYL 131
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI 249
KGL ++HS +VH++ K N+ V+E+ K+ D G+++ +A + +
Sbjct: 132 VYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARH----ADAEMTGYVV 185
Query: 250 VNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+R PEV S + +++ DI+S G + E++TG+
Sbjct: 186 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 33/216 (15%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGLLRDT----VVAIKRRVGSPRQE------FVAEVTYLS 134
AT ++ + IG G++G VYK RD VA+K V P E V EV L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKS-VRVPNGEEGLPISTVREVALLR 58
Query: 135 EIR---HRNLVTLLGYCQQNGYQ-----MLVFEYLPNG--SMCNHLYETGLESSTKLEFK 184
+ H N+V L+ C + LVFE++ + + GL + T +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 185 QRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGP 244
++ +GL LH+ +VH++ K N+LV K+AD G++++ P
Sbjct: 119 RQF------LRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP 170
Query: 245 SHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLEL 280
+ +R PEV ++ D++S G E+
Sbjct: 171 V--VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 34/230 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAAK 195
H+N+++LL E + + L + L ++E +R+S L
Sbjct: 82 HKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLC 137
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHG----SIVN 251
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR------TAGTSFMMTPYVVTR 189
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 234
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S IG G++G V DT ++ +++ P Q +
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 68
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 129 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTD 181
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 182 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 36/231 (15%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N+++LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIISLLNVFTPQK-----TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 136
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 XGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR------TAGTSFMMTPYVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 234
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 110
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 111 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 166 HKIDFGNEFKNIFGT--PAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 VGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR------TAGTSFMMTPYVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+R PEV + E DI+S GV + E++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 112 VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY 171
+V +KR V P + E+ + H N+V G+ ++ Q L EY G + + +
Sbjct: 38 IVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
Query: 172 -ETGL-ESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVAD 229
+ G+ E + F Q ++ G+ +LH + + H++ K N+L+DE K++D
Sbjct: 97 PDIGMPEPDAQRFFHQLMA-------GVVYLHGIG--ITHRDIKPENLLLDERDNLKISD 147
Query: 230 TGISKLLE-NIEEAGPSHGSIVNVFRDPEVEESGVF-SEMSDIYSFGVFLLELVTGQ 284
G++ + N E + + PE+ + F +E D++S G+ L ++ G+
Sbjct: 148 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 46/286 (16%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSP------RQEF 126
R F++++ E +G G FG VY + + +VA+K S +
Sbjct: 18 RHFTIDDFEIGRP-------LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQL 70
Query: 127 VAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQR 186
E+ + + H N++ L Y L+ EY P G LY+ L+ S + ++
Sbjct: 71 RREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGE----LYKE-LQKSCTFDEQRT 125
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+I A L + H K ++H++ K N+L+ K+AD G S ++
Sbjct: 126 ATIMEELADALMYCHGKK--VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC- 182
Query: 247 GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG----QEASHIVSLGSYEALIQWV 302
G++ + PE+ E + +E D++ GV EL+ G + ASH +Y +++
Sbjct: 183 GTL--DYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHN---ETYRRIVK-- 235
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEI 348
VD + + T G +DLI L+ +P R P ++
Sbjct: 236 ---------VDLKFPASVPT-GAQDLISKLLR--HNPSERLPLAQV 269
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 36/231 (15%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N+++LL + Q E + + L + L ++E +R+S L
Sbjct: 75 HKNIISLLNVFTPQK-----TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 129
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 130 XGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR------TAGTSFMMTPYVVT 181
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 227
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 110/243 (45%), Gaps = 38/243 (15%)
Query: 72 QGARQFSMEELEQATKQFSET-SLIGFGSFGPV-YKGLLRDTVVAIKRRVGSPRQEFVAE 129
+ +R ++ EQ+ K + ++G+GS G V ++G + VA+KR + + E
Sbjct: 17 RKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALME 76
Query: 130 VTYLSE-IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCN----HLYETGLESSTKLEFK 184
+ L+E H N++ YC + + L +CN L E+ S L+ +
Sbjct: 77 IKLLTESDDHPNVIRY--YCSETTDRFLYIAL----ELCNLNLQDLVESKNVSDENLKLQ 130
Query: 185 QR---VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVD-------------ENFIAKVA 228
+ +S+ A G+ HLHSLK ++H++ K N+LV EN ++
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 188
Query: 229 DTGISKLLENIE---EAGPSHGSIVNVFRDPEVEESGVFSEMS---DIYSFG-VFLLELV 281
D G+ K L++ + ++ S + +R PE+ E ++ DI+S G VF L
Sbjct: 189 DFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
Query: 282 TGQ 284
G+
Sbjct: 249 KGK 251
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 86 TKQFSETSLIGFGSFGPVYKGLLR-DTVVAIKRRVGSPRQEFVAEVTYLSEI-------R 137
T +F E IG G FG V+K + R D + +R P V E L E+ +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
H ++V ++ + ++ EY GS+ + + E S E + + + L +GL
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVGRGL 128
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVA-------DTGISKLLENIEEAGPSHGSIV 250
++HS+ LVH + K +N+ + I A D +K++ I + G V
Sbjct: 129 RYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH-----V 181
Query: 251 NVFRDPEVEE 260
P+VEE
Sbjct: 182 TRISSPQVEE 191
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 VGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR------TAGTSFMMTPYVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+R PEV + E DI+S GV + E++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 40/217 (18%)
Query: 88 QFSETSLIGFGSFGPVY------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
F L+G G+FG V +LR V+ K V V E L
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT----VTESRVLQN 64
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA-- 193
RH L L Q + V EY G + HL S + F + + GA
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEERARFYGAEI 117
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF 253
L +LHS +V+++ K N+++D++ K+ D G+ K G S G+ + F
Sbjct: 118 VSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKTF 168
Query: 254 ------RDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PEV E + D + GV + E++ G+
Sbjct: 169 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES---S 178
A+ TY L ++H N++ LL E + + HL L + S
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKS 119
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
KL + +GL ++HS ++H++ K +N+ V+E+ K+ D G+ + ++
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDD 177
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 178 -EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 40/217 (18%)
Query: 88 QFSETSLIGFGSFGPVY------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
F L+G G+FG V +LR V+ K V V E L
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT----VTESRVLQN 66
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA-- 193
RH L L Q + V EY G + HL S + F + + GA
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEERARFYGAEI 119
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF 253
L +LHS +V+++ K N+++D++ K+ D G+ K G S G+ + F
Sbjct: 120 VSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKXF 170
Query: 254 ------RDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PEV E + D + GV + E++ G+
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 40/217 (18%)
Query: 88 QFSETSLIGFGSFGPVY------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
F L+G G+FG V +LR V+ K V V E L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT----VTESRVLQN 61
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA-- 193
RH L L Q + V EY G + HL S + F + + GA
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEERARFYGAEI 114
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF 253
L +LHS +V+++ K N+++D++ K+ D G+ K G S G+ + F
Sbjct: 115 VSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKTF 165
Query: 254 ------RDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PEV E + D + GV + E++ G+
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 123 RQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLE 182
R+ EV + + +H N+V + ++ E+L G++ T + S +L
Sbjct: 86 RELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL------TDIVSQVRLN 139
Query: 183 FKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEA 242
+Q ++ + L +LH+ ++H++ K+ ++L+ + K++D G I +
Sbjct: 140 EEQIATVCEAVLQALAYLHAQG--VIHRDIKSDSILLTLDGRVKLSDFGFCA---QISKD 194
Query: 243 GPSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
P +V + PEV +++ DI+S G+ ++E+V G+
Sbjct: 195 VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSKPFQSII 75
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 135
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 136 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 189 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 110/243 (45%), Gaps = 38/243 (15%)
Query: 72 QGARQFSMEELEQATKQFSET-SLIGFGSFGPV-YKGLLRDTVVAIKRRVGSPRQEFVAE 129
+ +R ++ EQ+ K + ++G+GS G V ++G + VA+KR + + E
Sbjct: 17 RKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALME 76
Query: 130 VTYLSE-IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCN----HLYETGLESSTKLEFK 184
+ L+E H N++ YC + + L +CN L E+ S L+ +
Sbjct: 77 IKLLTESDDHPNVIRY--YCSETTDRFLYIAL----ELCNLNLQDLVESKNVSDENLKLQ 130
Query: 185 QR---VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVD-------------ENFIAKVA 228
+ +S+ A G+ HLHSLK ++H++ K N+LV EN ++
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 188
Query: 229 DTGISKLLENIE---EAGPSHGSIVNVFRDPEVEESGVFSEMS---DIYSFG-VFLLELV 281
D G+ K L++ + ++ S + +R PE+ E ++ DI+S G VF L
Sbjct: 189 DFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
Query: 282 TGQ 284
G+
Sbjct: 249 KGK 251
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ S +G G++G V T VA+K+ + P Q +
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIH 84
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 85 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 144
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++
Sbjct: 145 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 198 -EMXG---XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 86 TKQFSETSLIGFGSFGPVYKGLLR-DTVVAIKRRVGSPRQEFVAEVTYLSEI-------R 137
T +F E IG G FG V+K + R D + +R P V E L E+ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
H ++V ++ + ++ EY GS+ + + E S E + + + L +GL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVGRGL 126
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVA-------DTGISKLLENIEEAGPSHGSIV 250
++HS+ LVH + K +N+ + I A D +K++ I + G V
Sbjct: 127 RYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH-----V 179
Query: 251 NVFRDPEVEE 260
P+VEE
Sbjct: 180 TRISSPQVEE 189
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 86 TKQFSETSLIGFGSFGPVYKGLLR-DTVVAIKRRVGSPRQEFVAEVTYLSEI-------R 137
T +F E IG G FG V+K + R D + +R P V E L E+ +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
H ++V ++ + ++ EY GS+ + + E S E + + + L +GL
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVGRGL 124
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVA-------DTGISKLLENIEEAGPSHGSIV 250
++HS+ LVH + K +N+ + I A D +K++ I + G V
Sbjct: 125 RYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH-----V 177
Query: 251 NVFRDPEVEE 260
P+VEE
Sbjct: 178 TRISSPQVEE 187
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 40/217 (18%)
Query: 88 QFSETSLIGFGSFGPVY------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
F L+G G+FG V +LR V+ K V V E L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT----VTESRVLQN 61
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA-- 193
RH L L Q + V EY G + HL S + F + + GA
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEERARFYGAEI 114
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF 253
L +LHS +V+++ K N+++D++ K+ D G+ K G S G+ + F
Sbjct: 115 VSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKTF 165
Query: 254 ------RDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PEV E + D + GV + E++ G+
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 40/217 (18%)
Query: 88 QFSETSLIGFGSFGPVY------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
F L+G G+FG V +LR V+ K V V E L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT----VTESRVLQN 61
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA-- 193
RH L L Q + V EY G + HL S + F + + GA
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEERARFYGAEI 114
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF 253
L +LHS +V+++ K N+++D++ K+ D G+ K G S G+ + F
Sbjct: 115 VSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKXF 165
Query: 254 ------RDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PEV E + D + GV + E++ G+
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 41/238 (17%)
Query: 88 QFSETSLIGFGSFGPVYKG--LLRDTVVAIK--RRVGSPRQEFVAEVTYLSEIRH----- 138
F E +++G G+FG V K L AIK R ++EV L+ + H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 139 --------RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIA 190
RN V + ++ + EY N ++ + ++ L + + E+ +
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENL-NQQRDEYWRLFRQI 125
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL-----------ENI 239
L A L ++HS ++H++ K N+ +DE+ K+ D G++K + +N+
Sbjct: 126 LEA---LSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 240 EEAGPSHGSIVN--VFRDPEV-EESGVFSEMSDIYSFGVFLLELV----TGQEASHIV 290
+ + S + ++ EV + +G ++E D+YS G+ E++ TG E +I+
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNIL 238
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 86 TKQFSETSLIGFGSFGPVYKGLLR-DTVVAIKRRVGSPRQEFVAEVTYLSEI-------R 137
T +F E IG G FG V+K + R D + +R P V E L E+ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL 197
H ++V ++ + ++ EY GS+ + + E S E + + + L +GL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVGRGL 126
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVA-------DTGISKLLENIEEAGPSHGSIV 250
++HS+ LVH + K +N+ + I A D +K++ I + G V
Sbjct: 127 RYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH-----V 179
Query: 251 NVFRDPEVEE 260
P+VEE
Sbjct: 180 TRISSPQVEE 189
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 70
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++
Sbjct: 131 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--- 180
Query: 238 NIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
A G + +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 181 --HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 70
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++
Sbjct: 131 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--- 180
Query: 238 NIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
A G + +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 181 --HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 4 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 61
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 62 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 121
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 122 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 174
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 175 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 68
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 129 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTD 181
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 182 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 75
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 135
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 136 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 189 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 75
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 135
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 136 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 189 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 17 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 74
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 75 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 134
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 135 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTD 187
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 188 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 25 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 82
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 83 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 142
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 143 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 195
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 196 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 85 ATKQFSETSLIGFGSFGPVYKGLLRDT----VVAIKRRVGSPRQEFVAEVTYLSEIR--- 137
AT ++ + IG G++G VYK RD VA+K V P +S +R
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKS-VRVPNGGGGGGGLPISTVREVA 63
Query: 138 ---------HRNLVTLLGYCQQNGYQ-----MLVFEYLPNG--SMCNHLYETGLESSTKL 181
H N+V L+ C + LVFE++ + + GL + T
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 123
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE 241
+ ++ +GL LH+ +VH++ K N+LV K+AD G++++
Sbjct: 124 DLMRQF------LRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 175
Query: 242 AGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLEL 280
P + +R PEV ++ D++S G E+
Sbjct: 176 LTPV--VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 33/227 (14%)
Query: 76 QFSMEELEQAT----KQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQ---- 124
QF E+ +T K++ + IG G+ G V DTV+ I +++ P Q
Sbjct: 9 QFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAF--DTVLGINVAVKKLSRPFQNQTH 66
Query: 125 --EFVAEVTYLSEIRHRNLVTLLG-YCQQNGYQ-----MLVFEYLPNGSMCNHLYETGLE 176
E+ L + H+N+++LL + Q + LV E L + ++C ++
Sbjct: 67 AKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIH----- 120
Query: 177 SSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL 236
+L+ ++ + G+ HLHS ++H++ K +N++V + K+ D G+++
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 237 ENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
P + +R PEV ++ DI+S G + ELV G
Sbjct: 177 CTNFMMTPY--VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 40/217 (18%)
Query: 88 QFSETSLIGFGSFGPVY------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
F L+G G+FG V +LR V+ K V V E L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT----VTESRVLQN 61
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA-- 193
RH L L Q + V EY G + HL S + F + + GA
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEERARFYGAEI 114
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF 253
L +LHS +V+++ K N+++D++ K+ D G+ K G S G+ + F
Sbjct: 115 VSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKXF 165
Query: 254 ------RDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PEV E + D + GV + E++ G+
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 65
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 126 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 179 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 65
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 126 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 179 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 70
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++
Sbjct: 131 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--- 180
Query: 238 NIEEAGPSHGSIVN-VFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
A G + +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 181 --HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ S +G G++G V T VA+K+ + P Q +
Sbjct: 25 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIH 83
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 84 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 143
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++
Sbjct: 144 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 196
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 197 -EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 65
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 126 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 179 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ S +G G++G V T VA+K+ + P Q +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIH 60
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 61 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++
Sbjct: 121 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 174 -EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K + + E L
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY P G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+++D+ +V D G++K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 29 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 86
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 87 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 146
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 147 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 199
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 200 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ S +G G++G V T VA+K+ + P Q +
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIH 84
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 85 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 144
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++
Sbjct: 145 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 198 -EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 59
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 120 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 173 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 68
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 129 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 181
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 182 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ S +G G++G V T VA+K+ + P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIH 64
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++
Sbjct: 125 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 178 -EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 5 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 62
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 63 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 122
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 123 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 175
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 176 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+P G M +HL G F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 17 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 74
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 75 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 134
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 135 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 187
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 188 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 83
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 143
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 144 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 197 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 17/128 (13%)
Query: 166 MCNHLYETGLESSTK--LEFKQRV------SIALGAAKGLCHLHSLKPPLVHKNFKTANV 217
+C L +T L+ K ++ Q + IA+ K L HLHS K ++H++ K +NV
Sbjct: 83 ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNV 141
Query: 218 LVDENFIAKVADTGISKLL-----ENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYS 272
L++ K+ D GIS L ++I+ + + + +PE+ + G +S SDI+S
Sbjct: 142 LINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERI--NPELNQKG-YSVKSDIWS 198
Query: 273 FGVFLLEL 280
G+ ++EL
Sbjct: 199 LGITMIEL 206
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ S +G G++G V T VA+K+ + P Q +
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIH 70
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 71 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 130
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++
Sbjct: 131 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 184 -EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 69
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 130 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 182
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 183 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 68
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 129 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 181
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 182 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 60
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 61 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 121 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 173
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 174 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 70
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 131 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 183
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 184 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ S +G G++G V T VA+K+ + P Q +
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIH 70
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 71 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 130
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++
Sbjct: 131 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 184 -EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 60
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 61 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 121 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 173
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 174 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 40/217 (18%)
Query: 88 QFSETSLIGFGSFGPVY------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLSE 135
F L+G G+FG V +LR V+ K V V E L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT----VTESRVLQN 61
Query: 136 IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA-- 193
RH L L Q + V EY G + HL S + F + + GA
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEERARFYGAEI 114
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVF 253
L +LHS +V+++ K N+++D++ K+ D G+ K G S G+ + F
Sbjct: 115 VSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKXF 165
Query: 254 ------RDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PEV E + D + GV + E++ G+
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT------VVAIKRRVGSPRQ--EFVAEVTYLSEIRHR 139
QF +G GSFG V ++T + K++V +Q + E L +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
LV L + N +V EY+P G M +HL G F A +
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEY 149
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVNVFRDP 256
LHSL L++++ K N+L+D+ +V D G +K ++ P + + P
Sbjct: 150 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA-------P 200
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTG 283
E+ S +++ D ++ GV + E+ G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 34/230 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAAK 195
H+N+++LL E + + L + L ++E +R+S L
Sbjct: 82 HKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IVN 251
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR------TAGTSFMMTPYVVTR 189
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY P G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+++D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 110
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 111 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 166 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 97
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+P G M +HL G F A
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-----YAAQIV 152
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 207
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 208 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 89 FSETSLIGFGSFGPVY--KGLLRDTVVAIKRRVGSP-----RQEFVAEVTYLSEIRHRNL 141
F +G G FG V+ K + D AIKR + P R++ + EV L+++ H +
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKR-IRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 142 VTLL-GYCQQNGYQML------VFEYLPNGSMCNHLYETGLESSTKLEFKQR---VSIAL 191
V + ++N + L V+ Y+ + + +E ++R + I L
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 192 GAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---------A 242
A+ + LHS L+H++ K +N+ + + KV D G+ ++ EE A
Sbjct: 126 QIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 243 GPSHGSIV--NVFRDPEVEESGVFSEMSDIYSFGVFLLELV 281
H V ++ PE +S DI+S G+ L EL+
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 52 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 109
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 110 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 165 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 29 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 86
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 87 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 146
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 147 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 199
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 200 D-EMXG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+P G M +HL G F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 110
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 111 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 166 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 38/247 (15%)
Query: 74 ARQFSMEELEQAT----KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ-- 124
A QF E+ +T K++ IG G+ G V Y +L D VAIK+ + P Q
Sbjct: 1 ANQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQ 58
Query: 125 ----EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTK 180
E+ + + H+N+++LL E + + L + L +
Sbjct: 59 THAKRAYRELVLMKCVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQ 114
Query: 181 LEFK-QRVSIAL-GAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
+E +R+S L G+ HLHS ++H++ K +N++V + K+ D G+++
Sbjct: 115 MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---- 168
Query: 239 IEEAGPSHGS----IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGS 294
AG S + +R PEV + E DI+S G + E+V H +
Sbjct: 169 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPG 221
Query: 295 YEALIQW 301
+ + QW
Sbjct: 222 RDYIDQW 228
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 32/225 (14%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVYKG--LLRDTVVAIK-----RRVG-SPRQEFVA--- 128
++ E ++ L+G G FG V+ G L VAIK R +G SP + V
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 129 EVTYLSEIR----HRNLVTLLGYCQ-QNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKL 181
EV L ++ H ++ LL + + Q G+ +++ LP + +++ E G E ++
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC 143
Query: 182 EFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVD-ENFIAKVADTGISKLLENIE 240
F Q V AA CH + VH++ K N+L+D AK+ D G LL + E
Sbjct: 144 FFGQVV-----AAIQHCHSRGV----VHRDIKDENILIDLRRGCAKLIDFGSGALLHD-E 193
Query: 241 EAGPSHGSIVNVFRDPE-VEESGVFSEMSDIYSFGVFLLELVTGQ 284
G+ V+ PE + + + ++S G+ L ++V G
Sbjct: 194 PYTDFDGT--RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 65
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 126 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTD 178
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 179 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 110
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 111 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 166 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY P G M +HL G F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+++D+ KV D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 52 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 109
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 110 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 165 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 110
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 111 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 166 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 97
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ L L + N +V EY P G M +HL G S F A
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 152
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+++D+ KV D G +K ++ P + +
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA--- 207
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 208 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 110
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 111 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 166 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 33/211 (15%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE--NIEEAGPSHGSIVNV 252
+LHSL L++++ K N+L+D+ +V D G +K ++ AG
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE------ 203
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ S +++ D ++ GV + E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 69
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ +
Sbjct: 130 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTD 182
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 183 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 97
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ L L + N +V EY P G M +HL G S F A
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIV 152
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+++D+ KV D G +K ++ P + +
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA--- 207
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 208 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 83
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 84 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 138
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+DE +V D G +K ++ P + +
Sbjct: 139 LTFEYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 193
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 194 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 110
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 111 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 166 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 110
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 111 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 166 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 110
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 111 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 166 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 110
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 111 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 166 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ES 110
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 111 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 166 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 36/219 (16%)
Query: 87 KQFSETSLIGFGSFGPVY----------------KGLLRDTVVAIKRRVGSPRQEFVAEV 130
+ F ++G G++G V+ K L + T+V + R E
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR----TER 109
Query: 131 TYLSEIRHRNLVTLLGYCQQNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSI 189
L IR + L Y Q ++ L+ +Y+ G + HL + E T+ E V I
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHE----VQI 163
Query: 190 ALGA-AKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISK--LLENIEEAGPSH 246
+G L HLH L +++++ K N+L+D N + D G+SK + + E A
Sbjct: 164 YVGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC 221
Query: 247 GSIVNVFRDPEVEESGV--FSEMSDIYSFGVFLLELVTG 283
G+I + P++ G + D +S GV + EL+TG
Sbjct: 222 GTI--EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 58/300 (19%)
Query: 89 FSETSLIGFGSFGPVYKGL---------LRDTVVAIKRRVGSPR---QEFVAEVTYLSEI 136
F+E+ +G G+F ++KG+ L +T V +K + R + F + +S++
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H++LV G C +LV E++ GS+ +L + ++ + +K V+ L AA
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAA-- 125
Query: 197 LCHLHSLKP-PLVHKNFKTANVLV---------DENFIAKVADTGISKLL---ENIEEAG 243
+H L+ L+H N N+L+ + FI K++D GIS + + ++E
Sbjct: 126 ---MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKDILQERI 181
Query: 244 PSHGSIVNVFRDPE-VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWV 302
P + PE +E + +D +SFG L E+ +G + + +L S L Q+
Sbjct: 182 P--------WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP-LSALDSQRKL-QFY 231
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMA 362
R H+L E L L CM RP ++ +L + ++
Sbjct: 232 EDR--------HQLPAPKAAE----LANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 117
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 172
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 173 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLA--- 227
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 228 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 17/128 (13%)
Query: 166 MCNHLYETGLESSTK--LEFKQRV------SIALGAAKGLCHLHSLKPPLVHKNFKTANV 217
+C L +T L+ K ++ Q + IA+ K L HLHS K ++H++ K +NV
Sbjct: 127 ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNV 185
Query: 218 LVDENFIAKVADTGISKLL-----ENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYS 272
L++ K+ D GIS L + I+ + + + +PE+ + G +S SDI+S
Sbjct: 186 LINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERI--NPELNQKG-YSVKSDIWS 242
Query: 273 FGVFLLEL 280
G+ ++EL
Sbjct: 243 LGITMIEL 250
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 85 ATKQFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVT 131
+ + F +G GSFG V+ K L ++ VV +K+ + + +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM---- 59
Query: 132 YLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIAL 191
LS + H ++ + G Q ++ +Y+ G + + L ++ + +F A
Sbjct: 60 -LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-----YAA 113
Query: 192 GAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGS 248
L +LHS +++++ K N+L+D+N K+ D G +K + ++ P + +
Sbjct: 114 EVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIA 171
Query: 249 IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PEV + +++ D +SFG+ + E++ G
Sbjct: 172 -------PEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V L VAIK+ Q + + E+ L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 146 SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 197
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V L VAIK+ Q + + E+ L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 146 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLXEXVATRWY 197
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V L VAIK+ Q + + E+ L RH N+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 147 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLXEXVATRWY 198
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V L VAIK+ Q + + E+ L RH N+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 140 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 191
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 95 IGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQEFV-AEVTY-----LSEIRHRNLVTLL 145
+G G++G V Y LR V +++ P Q + A TY L ++H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAV--KKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 146 G-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + YL G+ N++ ++ S ++F + +GL ++H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-----LVYQLLRGLKYIH 148
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
S ++H++ K +NV V+E+ ++ D G+++ + E G +R PE+ +
Sbjct: 149 SAG--IIHRDLKPSNVAVNEDSELRILDFGLARQADE-EMTG---YVATRWYRAPEIMLN 202
Query: 262 GV-FSEMSDIYSFGVFLLELVTGQ 284
+ +++ DI+S G + EL+ G+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ + +G G++G V T VA+K+ + P Q +
Sbjct: 16 PTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIH 74
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 75 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 134
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++
Sbjct: 135 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 187
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 188 -EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V L VAIK+ Q + + E+ L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 146 SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 197
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V L VAIK+ Q + + E+ L RH N+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 147 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 198
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V L VAIK+ Q + + E+ L RH N+
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 147
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 148 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 199
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 200 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V L VAIK+ Q + + E+ L RH N+
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 138
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 139 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 190
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 191 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V L VAIK+ Q + + E+ L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 146 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 197
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 34/230 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAAK 195
H+N+++LL E + + L + L ++E +R+S L
Sbjct: 83 HKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 138
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHG----SIVN 251
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTR 190
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 235
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE---EAGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V L VAIK+ Q + + E+ L RH N+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 140 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 191
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 189 IALGAAKGLCHL-HSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLENI---EEAG 243
I L K L HL +LK ++H++ K +N+L+D + K+ D GIS +L+++I +AG
Sbjct: 130 ITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAG 187
Query: 244 PSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
+ DP G + SD++S G+ L EL TG+
Sbjct: 188 -CRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELATGR 226
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 36/231 (15%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N+++LL + Q E + + L + L ++E +R+S L
Sbjct: 83 HKNIISLLNVFTPQK-----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 137
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHG----SIV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 138 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVT 189
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 235
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 VGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR------TAGTSFMMTPYVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+R PEV + E DI+S G + E++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 36/231 (15%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N+++LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIISLLNVFTPQK-----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHG----SIV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 234
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 34/230 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN 80
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAAK 195
H+N+++LL E + + L + L ++E +R+S L
Sbjct: 81 HKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 136
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHG----SIVN 251
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTR 188
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 189 YYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 233
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 34/230 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAAK 195
H+N+++LL E + + L + L ++E +R+S L
Sbjct: 82 HKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHG----SIVN 251
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTR 189
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFVAEVTY-----LSEIRHRNL 141
+ + +G G++G V + T VAIK+ + E A+ Y L +RH N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 142 VTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHL 200
+ LL + YL M L L KL + + KGL ++
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDL--GKLMKHEKLGEDRIQFLVYQMLKGLRYI 144
Query: 201 HSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEE 260
H+ ++H++ K N+ V+E+ K+ D G+++ ++ E G + +R PEV
Sbjct: 145 HAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQADS-EMXG---XVVTRWYRAPEVIL 198
Query: 261 SGV-FSEMSDIYSFGVFLLELVTGQ 284
+ + +++ DI+S G + E++TG+
Sbjct: 199 NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 34/230 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAAK 195
H+N+++LL E + + L + L ++E +R+S L
Sbjct: 76 HKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IVN 251
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTR 183
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 228
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 34/230 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 138 HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAAK 195
H+N+++LL E + + L + L ++E +R+S L
Sbjct: 75 HKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 130
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IVN 251
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 131 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTR 182
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 227
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N+++LL + Q E + + L + L ++E +R+S L
Sbjct: 120 HKNIISLLNVFTPQK-----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 174
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFR 254
G+ HLHS ++H++ K +N++V + K+ D G+++ P + +R
Sbjct: 175 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY--VVTRYYR 230
Query: 255 DPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
PEV + E DI+S G + E+V H + + + QW
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 272
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
Query: 95 IGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQEFV-AEVTY-----LSEIRHRNLVTLL 145
+G G++G V Y LR V +++ P Q + A TY L ++H N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAV--KKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 146 G-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + YL G+ N++ + S ++F + +GL ++H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLKYIH 140
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
S ++H++ K +NV V+E+ ++ D G+++ + E G +R PE+ +
Sbjct: 141 SAG--IIHRDLKPSNVAVNEDCELRILDFGLARQADE-EMTG---YVATRWYRAPEIMLN 194
Query: 262 GV-FSEMSDIYSFGVFLLELVTGQ 284
+ +++ DI+S G + EL+ G+
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIALGAAK 195
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 196 -GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 CGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR------TAGTSFMMTPYVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+R PEV + E DI+S G + E++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT----VVAIKRRVGSP------RQ 124
R+F++++ F +G G FG VY L R+ ++A+K S
Sbjct: 9 RKFTIDD-------FDIVRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEH 59
Query: 125 EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK 184
+ E+ S +RH N++ + Y L+ E+ P G + L + G + + +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-----RFDEQ 114
Query: 185 QRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGP 244
+ + A L + H K ++H++ K N+L+ K+AD G S ++
Sbjct: 115 RSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 172
Query: 245 SHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
G++ + PE+ E E D++ GV E + G
Sbjct: 173 C-GTL--DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK-RRVGSPRQEFV-A 128
P RQ + + + +++ S +G G++G V + + I +++ P Q + A
Sbjct: 35 PTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHA 94
Query: 129 EVTY-----LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES---STK 180
+ TY L ++H N++ LL E + + HL L + K
Sbjct: 95 KRTYRELRLLKHMKHENVIGLLDVFTPAT----SLEEFNDVYLVTHLMGADLNNIVKCQK 150
Query: 181 LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIE 240
L + +GL ++HS ++H++ K +N+ V+E+ K+ D G+++ ++ E
Sbjct: 151 LTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-E 207
Query: 241 EAGPSHGSIVNVFRDPEVEESGVFSEMS-DIYSFGVFLLELVTGQ 284
G +R PE+ + + M+ DI+S G + EL+TG+
Sbjct: 208 MTG---YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 54/228 (23%)
Query: 84 QATKQFSETSLIGFGSFGPVYKGLLRD-----TVVAIKRR-------VGSPRQ-EFVAEV 130
+ ++++S S +G G+FG V+ + ++ V IK+ + P+ + E+
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 131 TYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLE-------F 183
LS + H N++ +L + G+ LV E +GS + ++ +L+ F
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLF--AFIDRHPRLDEPLASYIF 136
Query: 184 KQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE------ 237
+Q VS A G L + +H++ K N+++ E+F K+ D G + LE
Sbjct: 137 RQLVS-----AVGYLRLKDI----IHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY 187
Query: 238 ----NIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELV 281
IE P + N +R PE+E ++S GV L LV
Sbjct: 188 TFCGTIEYCAP-EVLMGNPYRGPELE----------MWSLGVTLYTLV 224
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 117/268 (43%), Gaps = 39/268 (14%)
Query: 94 LIGFGSFGPVYKGLLRDT-------VVAIKRRVGSP---RQEFVAEVTYLSEIRHRNLVT 143
+IG G+F V + + R+T +V + + SP ++ E + ++H ++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSI----ALGAAKGLCH 199
LL +G +VFE++ +C +E + + + V+ + A CH
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLC---FEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 200 LHSLKPPLVHKNFKTANVLV---DENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FR 254
++ ++H++ K NVL+ + + K+ D G++ + E+G G V F
Sbjct: 148 DNN----IIHRDVKPENVLLASKENSAPVKLGDFGVAI---QLGESGLVAGGRVGTPHFM 200
Query: 255 DPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDH 314
PEV + + + D++ GV L L++G + +E +I+ + +++ +
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKG-KYKMNPRQW--- 256
Query: 315 RLAGTFTTEGMRDLIRLTLQCMSSPGRR 342
+ +E +DL+R L M P R
Sbjct: 257 ----SHISESAKDLVRRML--MLDPAER 278
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 15/198 (7%)
Query: 95 IGFGSFGPVY------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYC 148
+G G+FG V+ GL R K R P ++ AE+ L + H N++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 149 QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLV 208
+ +V E G + + + L + L + HS +V
Sbjct: 90 EDYHNMYIVMETCEGGELLERIV-SAQARGKALSEGYVAELMKQMMNALAYFHSQH--VV 146
Query: 209 HKNFKTANVLVDE---NFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFS 265
HK+ K N+L + + K+ D G+++L ++ E + + G+ ++ PEV + V +
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGT--ALYMAPEVFKRDV-T 203
Query: 266 EMSDIYSFGVFLLELVTG 283
DI+S GV + L+TG
Sbjct: 204 FKCDIWSAGVVMYFLLTG 221
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 17/128 (13%)
Query: 166 MCNHLYETGLESSTK--LEFKQRV------SIALGAAKGLCHLHSLKPPLVHKNFKTANV 217
+C L +T L+ K ++ Q + IA+ K L HLHS K ++H++ K +NV
Sbjct: 110 ICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNV 168
Query: 218 LVDENFIAKVADTGISKLL-----ENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYS 272
L++ K D GIS L ++I+ + + + +PE+ + G +S SDI+S
Sbjct: 169 LINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERI--NPELNQKG-YSVKSDIWS 225
Query: 273 FGVFLLEL 280
G+ +EL
Sbjct: 226 LGITXIEL 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 74 ARQFSMEELEQATKQFSET-SLIGFGSFGPV-YKGLLRDTVVAIKRRVGSPRQEFVAEVT 131
+R ++ EQ+ K + ++G+GS G V ++G + VA+KR + + E+
Sbjct: 1 SRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK 60
Query: 132 YLSE-IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCN----HLYETGLESSTKLEFKQR 186
L+E H N++ YC + + L +CN L E+ S L+ ++
Sbjct: 61 LLTESDDHPNVIRY--YCSETTDRFLYIAL----ELCNLNLQDLVESKNVSDENLKLQKE 114
Query: 187 ---VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVD-------------ENFIAKVADT 230
+S+ A G+ HLHSLK ++H++ K N+LV EN ++D
Sbjct: 115 YNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 231 GISKLLE 237
G+ K L+
Sbjct: 173 GLCKKLD 179
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 97
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 152
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 207
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 208 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 74 ARQFSMEELEQATKQFSET-SLIGFGSFGPV-YKGLLRDTVVAIKRRVGSPRQEFVAEVT 131
+R ++ EQ+ K + ++G+GS G V ++G + VA+KR + + E+
Sbjct: 1 SRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK 60
Query: 132 YLSE-IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCN----HLYETGLESSTKLEFKQR 186
L+E H N++ YC + + L +CN L E+ S L+ ++
Sbjct: 61 LLTESDDHPNVIRY--YCSETTDRFLYIAL----ELCNLNLQDLVESKNVSDENLKLQKE 114
Query: 187 ---VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVD-------------ENFIAKVADT 230
+S+ A G+ HLHSLK ++H++ K N+LV EN ++D
Sbjct: 115 YNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 231 GISKLLE 237
G+ K L+
Sbjct: 173 GLCKKLD 179
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V L VAIK+ Q + + E+ L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L L +GL ++H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKCQHLSNDHICYFLYQILRGLKYIH 145
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 146 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 197
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R++ EV+ L EI+H N++TL + +L+ E + G + + L E ES
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK--ES 110
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFIA---KVADTGIS 233
T+ E + + L G+ +LHSL+ + H + K N+ L+D N K+ D G++
Sbjct: 111 LTEEEATEFLKQILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
++ E G+ F PE+ +D++S GV L++G
Sbjct: 166 HKIDFGNEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
Query: 95 IGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQEFV-AEVTY-----LSEIRHRNLVTLL 145
+G G++G V Y LR V +++ P Q + A TY L ++H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAV--KKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 146 G-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + YL G+ N++ + S ++F + +GL ++H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLKYIH 148
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
S ++H++ K +NV V+E+ ++ D G+++ + E G +R PE+ +
Sbjct: 149 SAG--IIHRDLKPSNVAVNEDSELRILDFGLARQADE-EMTG---YVATRWYRAPEIMLN 202
Query: 262 GV-FSEMSDIYSFGVFLLELVTGQ 284
+ +++ DI+S G + EL+ G+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L D VAIK+ + P Q E+ + +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N+++LL + Q E + + L + L ++E +R+S L
Sbjct: 120 HKNIISLLNVFTPQK-----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 174
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFR 254
G+ HLHS ++H++ K +N++V + K+ D G+++ P + +R
Sbjct: 175 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY--VVTRYYR 230
Query: 255 DPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
PEV + E DI+S G + E+V H + + + QW
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMV-----RHKILFPGRDYIDQW 272
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V + VAIK+ Q + + E+ L RH N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + YL M LY+ L + L +GL ++H
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 162 SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 213
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+R PEV + E DI+S G + E++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 83/212 (39%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 97
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ L L + N +V EY P G M +HL G F A
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-----YAAQIV 152
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+++D+ KV D G +K ++ P + +
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA--- 207
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 208 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIALGAAK 195
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 196 -GLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 CGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR------TAGTSFMMTPYVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+R PEV + E DI+S G + E++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V L VAI++ Q + + E+ L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 146 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 197
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V + VAIK+ Q + + E+ L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 142 SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 193
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT----VVAIKRRVGSP------RQ 124
R+F++++ F +G G FG VY L R+ ++A+K S
Sbjct: 9 RKFTIDD-------FDIGRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEH 59
Query: 125 EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK 184
+ E+ S +RH N++ + Y L+ E+ P G + L + G + + +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-----RFDEQ 114
Query: 185 QRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGP 244
+ + A L + H K ++H++ K N+L+ K+AD G S ++
Sbjct: 115 RSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 172
Query: 245 SHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
G++ + PE+ E E D++ GV E + G
Sbjct: 173 C-GTL--DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 75 RQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT----VVAIKRRVGSP------RQ 124
R+F++++ F +G G FG VY L R+ ++A+K S
Sbjct: 10 RKFTIDD-------FDIGRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEH 60
Query: 125 EFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK 184
+ E+ S +RH N++ + Y L+ E+ P G + L + G + + +
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-----RFDEQ 115
Query: 185 QRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGP 244
+ + A L + H K ++H++ K N+L+ K+AD G S ++
Sbjct: 116 RSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 173
Query: 245 SHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
G++ + PE+ E E D++ GV E + G
Sbjct: 174 C-GTL--DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V + VAIK+ Q + + E+ L RH N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 162 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 213
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 22/257 (8%)
Query: 95 IGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEF--VAEVTYLSEIR-HRNLVTLLGYCQQN 151
+G GSF K + + + A ++ S R E E+T L H N+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQ 78
Query: 152 GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKN 211
+ LV E L G + + + S T+ + R ++ + H+H + +VH++
Sbjct: 79 LHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHMHDVG--VVHRD 131
Query: 212 FKTANVLV---DENFIAKVADTGISKLLENIEEAGPSHGSIVNV-FRDPEVEESGVFSEM 267
K N+L ++N K+ D G ++L + P + + PE+ + E
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFARL--KPPDNQPLKTPCFTLHYAAPELLNQNGYDES 189
Query: 268 SDIYSFGVFLLELVTGQEA--SHIVSLGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEGM 325
D++S GV L +++GQ SH SL A+ + ++ +F A ++
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV--EIMKKIKKGDFSFEGEAWKNVSQEA 247
Query: 326 RDLIRLTLQCMSSPGRR 342
+DLI+ L P +R
Sbjct: 248 KDLIQGLLTV--DPNKR 262
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V + VAIK+ Q + + E+ L RH N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 144 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 195
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V + VAIK+ Q + + E+ L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 142 SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 193
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 207 LVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFR---DPEVEESGV 263
++H++ K +N+L+DE K+ D GIS L + + S G + DP
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPD 205
Query: 264 FSEMSDIYSFGVFLLELVTGQ 284
+ +D++S G+ L+EL TGQ
Sbjct: 206 YDIRADVWSLGISLVELATGQ 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V + VAIK+ Q + + E+ L RH N+
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 149
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 150 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 201
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 202 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V + VAIK+ Q + + E+ L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 142 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 193
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V + VAIK+ Q + + E+ L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 142 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 193
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+++D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 28/220 (12%)
Query: 79 MEELEQATKQFSE----TSLIGFGSFGPVYKGLLRDT-----VVAIKRRVGSPRQEFVAE 129
+++L + + QF++ IG GS+ + + + T V I + P +E
Sbjct: 10 VQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEIL 69
Query: 130 VTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSI 189
+ Y +H N++TL Y +V E + G + + + S ++ ++
Sbjct: 70 LRYG---QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE-----REASAV 121
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVL-VDENF---IAKVADTGISKLL--ENIEEAG 243
K + +LH+ +VH++ K +N+L VDE+ ++ D G +K L EN
Sbjct: 122 LFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 244 PSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
P + + F PEV E + DI+S GV L ++TG
Sbjct: 180 PCYTA---NFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKCVN 83
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 84 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQML 138
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV-- 252
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S + V
Sbjct: 139 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMVPFVVT 190
Query: 253 --FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+R PEV + E DI+S G + E++ G
Sbjct: 191 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V + VAIK+ Q + + E+ L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 142 SAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARV------ADPDHDHTGFLTEYVATRWY 193
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G + F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V + VAIK+ Q + + E+ L RH N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 144 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 195
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 23/209 (11%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFR 254
G+ HLHS ++H++ K +N++V + K+ D G+++ P + +R
Sbjct: 137 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPE--VVTRYYR 192
Query: 255 DPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PEV + E DI+S G + E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 83/211 (39%), Gaps = 33/211 (15%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE--NIEEAGPSHGSIVNV 252
+LHSL L++++ K N+L+D+ +V D G +K ++ G
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALA--- 206
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ---PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 76 QFSMEELEQATKQ-FSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFVAEVTY 132
Q+ E + TK F + ++G G FG V +R T + A K+ ++ E
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 133 LSE------IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQR 186
L+E + R +V+L + LV + G + H+Y G + F +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG-----QAGFPEA 286
Query: 187 VSIALGAAKGLCHLHSL-KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
++ AA+ C L L + +V+++ K N+L+D++ +++D G++ ++ E
Sbjct: 287 RAV-FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV---HVPEGQTI 342
Query: 246 HGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
G + V + PEV ++ ++ D ++ G L E++ GQ
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 76 QFSMEELEQATKQ-FSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFVAEVTY 132
Q+ E + TK F + ++G G FG V +R T + A K+ ++ E
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 133 LSE------IRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQR 186
L+E + R +V+L + LV + G + H+Y G + F +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG-----QAGFPEA 286
Query: 187 VSIALGAAKGLCHLHSL-KPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPS 245
++ AA+ C L L + +V+++ K N+L+D++ +++D G++ ++ E
Sbjct: 287 RAV-FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV---HVPEGQTI 342
Query: 246 HGSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
G + V + PEV ++ ++ D ++ G L E++ GQ
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 94 LIGFGSFGPVYKG----LLRDTVVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
++GFG V+ L RD V + R R S F E + + H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 146 GYCQQN----GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ +V EY+ ++ + ++ G + K+ + + A + L H
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSH 133
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVE 259
++H++ K AN+++ KV D GI++ + + + +++ + PE
Sbjct: 134 QNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 260 ESGVFSEMSDIYSFGVFLLELVTGQ 284
SD+YS G L E++TG+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 41/238 (17%)
Query: 88 QFSETSLIGFGSFGPVYKG--LLRDTVVAIK--RRVGSPRQEFVAEVTYLSEIRH----- 138
F E +++G G+FG V K L AIK R ++EV L+ + H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 139 --------RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIA 190
RN V ++ + EY N ++ + ++ L + + E+ +
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENL-NQQRDEYWRLFRQI 125
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLL-----------ENI 239
L A L ++HS ++H+N K N+ +DE+ K+ D G++K + +N+
Sbjct: 126 LEA---LSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 240 EEAGPSHGSIVNV--FRDPEV-EESGVFSEMSDIYSFGVFLLELV----TGQEASHIV 290
+ + S + + EV + +G ++E D YS G+ E + TG E +I+
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNIL 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + ++ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 207 LVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEESGVF 264
++H++ K AN+L+ KV D GI++ + + + +++ + PE
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 265 SEMSDIYSFGVFLLELVTGQ 284
SD+YS G L E++TG+
Sbjct: 197 DARSDVYSLGCVLYEVLTGE 216
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+R PEV + E DI+S G + E++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 83 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQML 137
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 138 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVT 189
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+R PEV + E DI+S G + E++ G
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+R PEV + E DI+S G + E++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 88 QFSETSLIGFGSFGPVYKGL--LRDTVVAIKRRVGSPRQEF----VAEVTYLSEIRHRNL 141
+++ S IG G++G V + VAIK+ Q + + E+ L RH N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 142 VTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ + + + + Y+ M LY+ L + L +GL ++H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI--------VNVF 253
S ++H++ K +N+L++ K+ D G++++ A P H +
Sbjct: 144 SAN--VLHRDLKPSNLLLNTTSDLKICDFGLARV------ADPDHDHTGFLTEYVATRWY 195
Query: 254 RDPEVE-ESGVFSEMSDIYSFGVFLLELVTGQ 284
R PE+ S +++ DI+S G L E+++ +
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 117
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G F A
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIV 172
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 173 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 227
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 228 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 94 LIGFGSFGPVYKG----LLRDTVVAIKR----RVGSPRQEFVAEVTYLSEIRHRNLVTLL 145
++GFG V+ L RD V + R R S F E + + H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 146 GYCQQN----GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLH 201
+ +V EY+ ++ + ++ G + K+ + + A + L H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSH 133
Query: 202 SLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVE 259
++H++ K AN+++ KV D GI++ + + + +++ + PE
Sbjct: 134 QNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 260 ESGVFSEMSDIYSFGVFLLELVTGQ 284
SD+YS G L E++TG+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 122 PRQEFVAEVTYLSEIRHRNLVTLLGYCQQ--NGYQMLVFEYLPNGSMCNHLYETGL-ESS 178
P ++ E+ L ++ H N+V L+ + +VFE + G + L E
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQ 138
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
+ F+ + KG+ +LH K ++H++ K +N+LV E+ K+AD G+S +
Sbjct: 139 ARFYFQDLI-------KGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 239 IEEAGPSHGSIVNVFRDPE--VEESGVFS-EMSDIYSFGVFLLELVTGQ 284
+A S+ F PE E +FS + D+++ GV L V GQ
Sbjct: 190 -SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 107/227 (47%), Gaps = 25/227 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAIKRRVGSPRQEFV- 127
P RQ + + + +++ S +G G++G V T VA+K+ + P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIH 64
Query: 128 AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLESS 178
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
++F + +GL ++HS ++H++ K +N+ V+E+ K+ D +++ ++
Sbjct: 125 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDD 177
Query: 239 IEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 178 -EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 91
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G F A
Sbjct: 92 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIV 146
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 147 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 201
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 202 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE---AGPSHGSIVN 251
+LHSL L++++ K N+L+D+ +V D G +K ++ P + +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLA--- 206
Query: 252 VFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
PE+ S +++ D ++ GV + E+ G
Sbjct: 207 ----PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 93/228 (40%), Gaps = 24/228 (10%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKG----LLRDTVVAIKR----RVGSP 122
P+G+ + L + ++ ++GFG V+ L RD V + R R S
Sbjct: 16 PRGSHMTTPSHL---SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSF 72
Query: 123 RQEFVAEVTYLSEIRHRNLVTLLGYCQQN----GYQMLVFEYLPNGSMCNHLYETGLESS 178
F E + + H +V + + +V EY+ ++ + ++ G
Sbjct: 73 YLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---- 128
Query: 179 TKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLEN 238
+ K+ + + A + L H ++H++ K AN+++ KV D GI++ + +
Sbjct: 129 -PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIAD 185
Query: 239 IEEAGPSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
+ +++ + PE SD+YS G L E++TG+
Sbjct: 186 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 128/300 (42%), Gaps = 58/300 (19%)
Query: 89 FSETSLIGFGSFGPVYKGL---------LRDTVVAIKRRVGSPR---QEFVAEVTYLSEI 136
F+E+ +G G+F ++KG+ L +T V +K + R + F + +S++
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 137 RHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKG 196
H++LV G C +LV E++ GS+ +L + ++ + +K V+ L A
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAWA-- 125
Query: 197 LCHLHSLKP-PLVHKNFKTANVLV---------DENFIAKVADTGISKLL---ENIEEAG 243
+H L+ L+H N N+L+ + FI K++D GIS + + ++E
Sbjct: 126 ---MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKDILQERI 181
Query: 244 PSHGSIVNVFRDPE-VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWV 302
P + PE +E + +D +SFG L E+ +G + + +L S L Q+
Sbjct: 182 P--------WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP-LSALDSQRKL-QFY 231
Query: 303 RSRLSSNNFVDHRLAGTFTTEGMRDLIRLTLQCMSSPGRRRPKMEIVMTELERIHEKEMA 362
R H+L E L L CM RP ++ +L + ++
Sbjct: 232 EDR--------HQLPAPKAAE----LANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 141 LVTLLGYCQQNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA--AKGL 197
+T L C Q ++ V EY+ G + H+ + G FK+ ++ A A GL
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-------RFKEPHAVFYAAEIAIGL 455
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI-VNVFRDP 256
L S +++++ K NV++D K+AD G+ K ENI + + + P
Sbjct: 456 FFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAP 511
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTGQ 284
E+ + + D ++FGV L E++ GQ
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 71 PQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIK---RRVGSPRQEFV 127
P RQ + + + +++ S +G G++G V DT ++ +++ P Q +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSII 63
Query: 128 -AEVTY-----LSEIRHRNLVTLLG-YCQQNGYQMLVFEYLPN---GSMCNHLYETGLES 177
A+ TY L ++H N++ LL + + YL G+ N++ + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE 237
++F + +GL ++HS ++H++ K +N+ V+E+ K+ G+++ +
Sbjct: 124 DDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTD 176
Query: 238 NIEEAGPSHGSIVNVFRDPEVEESGV-FSEMSDIYSFGVFLLELVTGQ 284
+ E G +R PE+ + + +++ DI+S G + EL+TG+
Sbjct: 177 D-EMTG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 181 LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISK-LLENI 239
L + + + AKG+ L S K +H++ N+L+ E + K+ D G+++ + ++
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247
Query: 240 EEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + + PE V++ SD++SFGV L E+ +
Sbjct: 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 35/243 (14%)
Query: 59 GP--SSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT----- 111
GP +S TG G +G+ +F M + + + +G G+F V + + + T
Sbjct: 1 GPHMASMTGGQQMG-RGS-EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA 58
Query: 112 --VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNH 169
++ K+ Q+ E +++H N+V L Q+ + LVF+ + G +
Sbjct: 59 AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--- 115
Query: 170 LYETGLESSTKLEFKQRVSIALGAAKGL-----CHLHSLKPPLVHKNFKTANVLV---DE 221
E EF + + L CH + +VH+N K N+L+ +
Sbjct: 116 -----FEDIVAREFYSEADASHCIQQILESIAYCHSNG----IVHRNLKPENLLLASKAK 166
Query: 222 NFIAKVADTGISKLLENIEEAGPSHG-SIVNVFRDPEVEESGVFSEMSDIYSFGVFLLEL 280
K+AD G++ + ++ HG + + PEV + +S+ DI++ GV L L
Sbjct: 167 GAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL 223
Query: 281 VTG 283
+ G
Sbjct: 224 LVG 226
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH----GSIV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMEPEVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E DI+S G + E+V H + + + QW
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVC-----HKILFPGRDYIDQW 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 83/214 (38%), Gaps = 39/214 (18%)
Query: 88 QFSETSLIGFGSFGPVY-------------KGLLRDTVVAIKRRVGSPRQEFVAEVTYLS 134
QF +G GSFG V K L + VV +K+ + + E L
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-----EHTLNEKRILQ 96
Query: 135 EIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAA 194
+ LV L + N +V EY+ G M +HL G S F A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIV 151
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFR 254
+LHSL L++++ K N+L+D+ +V D G +K ++ G +
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------GRTWXLCG 200
Query: 255 DPEVEESGV-----FSEMSDIYSFGVFLLELVTG 283
PE + +++ D ++ GV + E+ G
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 181 LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISK-LLENI 239
L + + + AKG+ L S K +H++ N+L+ E + K+ D G+++ + ++
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 252
Query: 240 EEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + + PE V++ SD++SFGV L E+ +
Sbjct: 253 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 141 LVTLLGYCQQNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA--AKGL 197
+T L C Q ++ V EY+ G + H+ + G FK+ ++ A A GL
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-------RFKEPHAVFYAAEIAIGL 134
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI-VNVFRDP 256
L S +++++ K NV++D K+AD G+ K ENI + + + P
Sbjct: 135 FFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAP 190
Query: 257 EVEESGVFSEMSDIYSFGVFLLELVTGQ 284
E+ + + D ++FGV L E++ GQ
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 181 LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISK-LLENI 239
L + + + AKG+ L S K +H++ N+L+ E + K+ D G+++ + ++
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 245
Query: 240 EEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + + PE V++ SD++SFGV L E+ +
Sbjct: 246 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 18/213 (8%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVY------KGLLRDTVVAIKRRVGSPRQEFVAEVTYL 133
++ E K F +G G+F V G L K+ + E+ L
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 134 SEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGA 193
+I+H N+V L + + LV + + G + + + E G + K ++
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE-----KDASTLIRQV 129
Query: 194 AKGLCHLHSLKPPLVHKNFKTANVLV---DENFIAKVADTGISKLLENIEEAGPSHGSIV 250
+ +LH + +VH++ K N+L DE ++D G+SK+ + + G+
Sbjct: 130 LDAVYYLHRMG--IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPG 187
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
V PEV +S+ D +S GV L+ G
Sbjct: 188 YVA--PEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 181 LEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISK-LLENI 239
L + + + AKG+ L S K +H++ N+L+ E + K+ D G+++ + ++
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 254
Query: 240 EEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVT 282
+ + + PE V++ SD++SFGV L E+ +
Sbjct: 255 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 156 LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTA 215
+V EY+ ++ + ++ G + K+ + + A + L H ++H++ K A
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPA 145
Query: 216 NVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSEMSDIYSF 273
N+++ KV D GI++ + + + +++ + PE SD+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 274 GVFLLELVTGQ 284
G L E++TG+
Sbjct: 206 GCVLYEVLTGE 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 29/212 (13%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT-----VVAIKRRVGSPRQEF---VAEVTYLSEIRHR 139
F+ ++G GSFG V + T + +K+ V + + E L+ +
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 140 NLVTLLGYCQQNGYQM-LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
+T L C Q ++ V EY+ G + H+ + G K + Q V A + GL
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG-----KFKEPQAVFYAAEISIGLF 134
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISK--LLENI---EEAG-PSHGSIVNV 252
LH K +++++ K NV++D K+AD G+ K +++ + E G P + +
Sbjct: 135 FLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIA---- 188
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PE+ + + D +++GV L E++ GQ
Sbjct: 189 ---PEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 156 LVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTA 215
+V EY+ ++ + ++ G + K+ + + A + L H ++H++ K A
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPA 145
Query: 216 NVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSEMSDIYSF 273
N+++ KV D GI++ + + + +++ + PE SD+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 274 GVFLLELVTGQ 284
G L E++TG+
Sbjct: 206 GCVLYEVLTGE 216
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 82 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH----GSIV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 137 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMEPEVVT 188
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E D++S G + E+V H + + + QW
Sbjct: 189 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVC-----HKILFPGRDYIDQW 234
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKCVN 86
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 87 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQML 141
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 142 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVT 193
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E D++S G + E+V H + + + QW
Sbjct: 194 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVC-----HKILFPGRDYIDQW 239
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 95 IGFGSFGPVYKGLLRDT-----VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
IG GS+ + + + T V I + P +E + Y +H N++TL
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRY---GQHPNIITLKDVYD 91
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+ LV E + G + + + S + F + K + +LHS +VH
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQG--VVH 144
Query: 210 KNFKTANVL-VDENF---IAKVADTGISKLL--ENIEEAGPSHGSIVNVFRDPEVEESGV 263
++ K +N+L VDE+ ++ D G +K L EN P + + F PEV +
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA---NFVAPEVLKRQG 201
Query: 264 FSEMSDIYSFGVFLLELVTG 283
+ E DI+S G+ L ++ G
Sbjct: 202 YDEGCDIWSLGILLYTMLAG 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 79 MEELEQATKQFSE----TSLIGFGSFGPVYKGLLRDT-----VVAIKRRVGSPRQEFVAE 129
+++L + + QF++ IG GS+ + + + T V I + P +E
Sbjct: 10 VQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEIL 69
Query: 130 VTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSI 189
+ Y +H N++TL Y +V E G + + + S ++ ++
Sbjct: 70 LRYG---QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE-----REASAV 121
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVL-VDENFIA---KVADTGISKLL--ENIEEAG 243
K + +LH+ +VH++ K +N+L VDE+ ++ D G +K L EN
Sbjct: 122 LFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT 179
Query: 244 PSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
P + + F PEV E + DI+S GV L +TG
Sbjct: 180 PCYTA---NFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 87 KQFSETSLIGFGSFGPV---YKGLLRDTVVAIKRRVGSPRQ------EFVAEVTYLSEIR 137
K++ IG G+ G V Y +L V AIK+ + P Q E+ + +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKK-LSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 138 HRNLVTLLG-YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK-QRVSIAL-GAA 194
H+N++ LL + Q E + + L + L ++E +R+S L
Sbjct: 76 HKNIIGLLNVFTPQKS-----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQML 130
Query: 195 KGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGS----IV 250
G+ HLHS ++H++ K +N++V + K+ D G+++ AG S +
Sbjct: 131 CGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVT 182
Query: 251 NVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQW 301
+R PEV + E D++S G + E+V H + + + QW
Sbjct: 183 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVC-----HKILFPGRDYIDQW 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R+E EV+ L ++ H N++TL + +L+ E + G + + L +
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----- 108
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFI---AKVADTGIS 233
L ++ S G+ +LH+ K + H + K N+ L+D+N K+ D G++
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+E+ E G+ F PE+ +D++S GV L++G
Sbjct: 167 HEIEDGVEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 93 SLIGFGSFGPVYKGLLRDTVVAIKRRVGS---------PRQE--FVAEVTYLSEIRHRNL 141
L+G GS+G V + L D+ +R V P E E+ L +RH+N+
Sbjct: 11 DLLGEGSYGKVKEVL--DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 142 VTLLG--YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFK--QRVSIALGAAKGL 197
+ L+ Y ++ +V EY C + L+S + F Q GL
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEY------CVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGL 122
Query: 198 CHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENI---EEAGPSHGSIVNVFR 254
+LHS +VHK+ K N+L+ K++ G+++ L + S GS F+
Sbjct: 123 EYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGS--PAFQ 178
Query: 255 DPEVEES-GVFSEMS-DIYSFGVFLLELVTG 283
PE+ FS DI+S GV L + TG
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 95 IGFGSFGPVYKGLLRDT-----VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQ 149
IG GS+ + + + T V I + P +E + Y +H N++TL
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRY---GQHPNIITLKDVYD 91
Query: 150 QNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVH 209
+ LV E + G + + + S + F + K + +LHS +VH
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQG--VVH 144
Query: 210 KNFKTANVL-VDENF---IAKVADTGISKLL--ENIEEAGPSHGSIVNVFRDPEVEESGV 263
++ K +N+L VDE+ ++ D G +K L EN P + + F PEV +
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA---NFVAPEVLKRQG 201
Query: 264 FSEMSDIYSFGVFLLELVTG 283
+ E DI+S G+ L ++ G
Sbjct: 202 YDEGCDIWSLGILLYTMLAG 221
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R+E EV+ L ++ H N++TL + +L+ E + G + + L +
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----- 108
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFI---AKVADTGIS 233
L ++ S G+ +LH+ K + H + K N+ L+D+N K+ D G++
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+E+ E G+ F PE+ +D++S GV L++G
Sbjct: 167 HEIEDGVEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 29/212 (13%)
Query: 88 QFSETSLIGFGSFGPVYKGLLRDT-----VVAIKRRVGSPRQEF---VAEVTYLSEIRHR 139
F ++G GSFG V +++T V +K+ V + + E LS R+
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 140 NLVTLLGYCQQNGYQML-VFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
+T L C Q ++ V E++ G + H+ + S + + + A L
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-----QKSRRFDEARARFYAAEIISALM 138
Query: 199 HLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD--- 255
LH +++++ K NVL+D K+AD G+ K G +G F
Sbjct: 139 FLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCK-------EGICNGVTTATFCGTPD 189
Query: 256 ---PEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
PE+ + ++ D ++ GV L E++ G
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVS-- 143
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + E S V
Sbjct: 144 -----ALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFV 195
Query: 251 NV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ S+ SD+++ G + +LV G
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R+E EV+ L ++ H N++TL + +L+ E + G + + L +
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----- 108
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFI---AKVADTGIS 233
L ++ S G+ +LH+ K + H + K N+ L+D+N K+ D G++
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+E+ E G+ F PE+ +D++S GV L++G
Sbjct: 167 HEIEDGVEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 24/200 (12%)
Query: 95 IGFGSFGPVYKGLLRDT----VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYC 148
IG G+FG L+RD +VA+K R + E+ +RH N+V
Sbjct: 27 IGAGNFG--VARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 149 QQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKPP 206
+ +V EY G + + G E + F+Q +S G+ + H+++
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYAHAMQ-- 135
Query: 207 LVHKNFKTANVLVDENFIA--KVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N L+D + K+AD G SK ++ + P + PEV +
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSK--ASVLHSQPKSAVGTPAYIAPEVLLKKEY 193
Query: 265 S-EMSDIYSFGVFLLELVTG 283
+++D++S GV L ++ G
Sbjct: 194 DGKVADVWSCGVTLYVMLVG 213
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R+E EV+ L ++ H N++TL + +L+ E + G + + L +
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----- 108
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFI---AKVADTGIS 233
L ++ S G+ +LH+ K + H + K N+ L+D+N K+ D G++
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+E+ E G+ F PE+ +D++S GV L++G
Sbjct: 167 HEIEDGVEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G+F V + + + T ++ K+ Q+ E +++H N+V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL-----CHLHS 202
Q+ + LVF+ + G + E EF + + L CH +
Sbjct: 74 IQEESFHYLVFDLVTGGEL--------FEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 203 LKPPLVHKNFKTANVLV---DENFIAKVADTGISKLLENIEEAGPSHG-SIVNVFRDPEV 258
+VH+N K N+L+ + K+AD G++ + ++ HG + + PEV
Sbjct: 126 ----IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEV 178
Query: 259 EESGVFSEMSDIYSFGVFLLELVTG 283
+ +S+ DI++ GV L L+ G
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G+F V + + + T ++ K+ Q+ E +++H N+V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPL 207
Q+ + LVF+ + G + + E ++ + + L + CH + +
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESI-AYCHSNG----I 126
Query: 208 VHKNFKTANVLV---DENFIAKVADTGISKLLENIEEAGPSHG-SIVNVFRDPEVEESGV 263
VH+N K N+L+ + K+AD G++ + ++ HG + + PEV +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 264 FSEMSDIYSFGVFLLELVTG 283
+S+ DI++ GV L L+ G
Sbjct: 184 YSKPVDIWACGVILYILLVG 203
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R+E EV+ L ++ H N++TL + +L+ E + G + + L +
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----- 108
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFI---AKVADTGIS 233
L ++ S G+ +LH+ K + H + K N+ L+D+N K+ D G++
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+E+ E G+ F PE+ +D++S GV L++G
Sbjct: 167 HEIEDGVEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 27/123 (21%)
Query: 204 KPPLVHKNFKTANVLVDENF------------------IAKVADTGISKLLE--NIEEAG 243
K L H + K N+L+D+ + I + TGI KL++
Sbjct: 155 KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI-KLIDFGCATFKS 213
Query: 244 PSHGSIVNV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTG----QEASHIVSLGSYEA 297
HGSI+N +R PEV + + SD++SFG L EL TG + H+ L E+
Sbjct: 214 DYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMES 273
Query: 298 LIQ 300
+IQ
Sbjct: 274 IIQ 276
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 30/203 (14%)
Query: 95 IGFGSFGPVYKGLLRDTV----VAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYC 148
IG G+FG L+RD + VA+K R + + E+ +RH N+V
Sbjct: 28 IGSGNFG--VARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 149 QQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKPP 206
+ ++ EY G + + G E + F+Q +S G+ + HS++
Sbjct: 86 LTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS-------GVSYCHSMQ-- 136
Query: 207 LVHKNFKTANVLVDENFIA--KVADTGISKLLENIEEAGPSHGSIVNVFRDPEV----EE 260
+ H++ K N L+D + K+ D G SK ++ + P + PEV E
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLLRQEY 194
Query: 261 SGVFSEMSDIYSFGVFLLELVTG 283
G +++D++S GV L ++ G
Sbjct: 195 DG---KIADVWSCGVTLYVMLVG 214
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 86/208 (41%), Gaps = 18/208 (8%)
Query: 86 TKQFSETSLIGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRH 138
T ++ IG G+F V + + T ++ K+ Q+ E ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V L + G+ LVF+ + G + + E ++ + + L A
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDI--VAREYYSEADASHCIQQILEAV---- 116
Query: 199 HLHSLKPPLVHKNFKTANVLVD---ENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
LH + +VH++ K N+L+ + K+AD G++ ++ ++A +
Sbjct: 117 -LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG-YLS 174
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVTG 283
PEV + + DI++ GV L L+ G
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G+F V + + + T ++ K+ Q+ E +++H N+V L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGL-----CHLHS 202
Q+ + LVF+ + G + E EF + + L CH +
Sbjct: 73 IQEESFHYLVFDLVTGGEL--------FEDIVAREFYSEADASHCIQQILESIAYCHSNG 124
Query: 203 LKPPLVHKNFKTANVLV---DENFIAKVADTGISKLLENIEEAGPSHG-SIVNVFRDPEV 258
+VH+N K N+L+ + K+AD G++ + ++ HG + + PEV
Sbjct: 125 ----IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEV 177
Query: 259 EESGVFSEMSDIYSFGVFLLELVTG 283
+ +S+ DI++ GV L L+ G
Sbjct: 178 LKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 11/175 (6%)
Query: 112 VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY 171
++ K+ Q+ E ++H N+V L + G+ L+F+ + G + +
Sbjct: 43 IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI- 101
Query: 172 ETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENF---IAKVA 228
E ++ + + L A LH + +VH+N K N+L+ K+A
Sbjct: 102 -VAREYYSEADASHCIQQILEAV-----LHCHQMGVVHRNLKPENLLLASKLKGAAVKLA 155
Query: 229 DTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
D G++ +E ++A + PEV + + D+++ GV L L+ G
Sbjct: 156 DFGLAIEVEGEQQAWFGFAGTPG-YLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 31 SQSKNYQNKNSETGSSDPSALVEWNRGAGPSSATGQPSFGPQGARQFSMEELEQATKQFS 90
S ++ + ++ E GS++P V+ +S + + AR F + ++
Sbjct: 1 SMAEPLKEEDGEDGSAEPPGPVKAEPAHTAASVAAK-NLALLKARSFDVTF--DVGDEYE 57
Query: 91 ETSLIGFGSFGPVYKGLLRDT--VVAIKR-----RVGSPRQEFVAEVTYLSEIRHRNLVT 143
IG G++G V R T VAIK+ V + + + E+ L +H N++
Sbjct: 58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIA 117
Query: 144 LLGYCQQN-GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
+ + Y Y+ M + L++ + SS L + +GL ++HS
Sbjct: 118 IKDILRPTVPYGEFKSVYVVLDLMESDLHQI-IHSSQPLTLEHVRYFLYQLLRGLKYMHS 176
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISK 234
+ ++H++ K +N+LV+EN K+ D G+++
Sbjct: 177 AQ--VIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 31 SQSKNYQNKNSETGSSDPSALVEWNRGAGPSSATGQPSFGPQGARQFSMEELEQATKQFS 90
S ++ + ++ E GS++P V+ +S + + AR F + ++
Sbjct: 2 SMAEPLKEEDGEDGSAEPPGPVKAEPAHTAASVAAK-NLALLKARSFDV--TFDVGDEYE 58
Query: 91 ETSLIGFGSFGPVYKGLLRDT--VVAIKR-----RVGSPRQEFVAEVTYLSEIRHRNLVT 143
IG G++G V R T VAIK+ V + + + E+ L +H N++
Sbjct: 59 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIA 118
Query: 144 LLGYCQQN-GYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHS 202
+ + Y Y+ M + L++ + SS L + +GL ++HS
Sbjct: 119 IKDILRPTVPYGEFKSVYVVLDLMESDLHQI-IHSSQPLTLEHVRYFLYQLLRGLKYMHS 177
Query: 203 LKPPLVHKNFKTANVLVDENFIAKVADTGISK 234
+ ++H++ K +N+LV+EN K+ D G+++
Sbjct: 178 AQ--VIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 118 RVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLES 177
R G R+E EV+ L ++ H N++TL + +L+ E + G + + L +
Sbjct: 54 RRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ----- 108
Query: 178 STKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANV-LVDENFI---AKVADTGIS 233
L ++ S G+ +LH+ K + H + K N+ L+D+N K+ D G++
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 234 KLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+E+ E G+ F PE+ +D++S GV L++G
Sbjct: 167 HEIEDGVEFKNIFGT--PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 30/216 (13%)
Query: 87 KQFSETSLIGFGSFGPVYKGLLRDT--VVAIKR-----RVGSPRQEFVAEVTYLSEIRHR 139
+ F S +G GS+G V+K ++ + A+KR R R +AEV ++
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 140 NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCH 199
L + G + + L S+ H G L Q L H
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAH 172
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLE-------NIEEAGPSHGSIVNV 252
LHS LVH + K AN+ + K+ D G+ L+E ++E P
Sbjct: 173 LHSQG--LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPR------- 221
Query: 253 FRDPEVEESGVFSEMSDIYSFGVFLLELVTGQEASH 288
+ PE+ + G + +D++S G+ +LE+ E H
Sbjct: 222 YMAPELLQ-GSYGTAADVFSLGLTILEVACNMELPH 256
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 144
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + E S V
Sbjct: 145 -----ALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFV 196
Query: 251 NV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 14/155 (9%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLV-FEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSI 189
+S + H V L +C Q+ ++ Y NG + ++ + G E+ T+ + VS
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS- 148
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI 249
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 149 ------ALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 250 VNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 84/199 (42%), Gaps = 18/199 (9%)
Query: 95 IGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGY 147
+G G+F V + + T ++ K+ Q+ E ++H N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 148 CQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPL 207
+ G+ LVF+ + G + + E ++ + + L + CHL+ +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI--VAREYYSEADASHCIQQILESVNH-CHLNG----I 124
Query: 208 VHKNFKTANVLV---DENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVF 264
VH++ K N+L+ + K+AD G++ ++ ++A + PEV +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG-YLSPEVLRKDPY 183
Query: 265 SEMSDIYSFGVFLLELVTG 283
+ D+++ GV L L+ G
Sbjct: 184 GKPVDMWACGVILYILLVG 202
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 141
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 142 -----ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 69/158 (43%), Gaps = 4/158 (2%)
Query: 127 VAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQR 186
+ E L+++ R +V+L + LV + G + H+Y E + + +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRA 291
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+ GL HLH +++++ K NVL+D++ +++D G++ L+ + +
Sbjct: 292 IFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 247 GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
F PE+ + D ++ GV L E++ +
Sbjct: 350 AGTPG-FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 69/158 (43%), Gaps = 4/158 (2%)
Query: 127 VAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQR 186
+ E L+++ R +V+L + LV + G + H+Y E + + +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRA 291
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+ GL HLH +++++ K NVL+D++ +++D G++ L+ + +
Sbjct: 292 IFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 247 GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
F PE+ + D ++ GV L E++ +
Sbjct: 350 AGTPG-FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 69/158 (43%), Gaps = 4/158 (2%)
Query: 127 VAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQR 186
+ E L+++ R +V+L + LV + G + H+Y E + + +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRA 291
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+ GL HLH +++++ K NVL+D++ +++D G++ L+ + +
Sbjct: 292 IFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 247 GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
F PE+ + D ++ GV L E++ +
Sbjct: 350 AGTPG-FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 69/158 (43%), Gaps = 4/158 (2%)
Query: 127 VAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQR 186
+ E L+++ R +V+L + LV + G + H+Y E + + +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRA 291
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
+ GL HLH +++++ K NVL+D++ +++D G++ L+ + +
Sbjct: 292 IFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 247 GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
F PE+ + D ++ GV L E++ +
Sbjct: 350 AGTPG-FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 86 TKQFSETSLIGFGSFGPVYKGLLRDT-------VVAIKRRVGSPRQEFVAEVTYLSEIRH 138
T ++ +G G+F V + + T ++ K+ Q+ E ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 139 RNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLC 198
N+V L + G+ LVF+ + G + + E ++ + + L + C
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDI--VAREYYSEADASHCIQQILESVNH-C 119
Query: 199 HLHSLKPPLVHKNFKTANVLV---DENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRD 255
HL+ +VH++ K N+L+ + K+AD G++ ++ ++A +
Sbjct: 120 HLNG----IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG-YLS 174
Query: 256 PEVEESGVFSEMSDIYSFGVFLLELVTG 283
PEV + + D+++ GV L L+ G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 110/265 (41%), Gaps = 33/265 (12%)
Query: 94 LIGFGSFGPVYKGLLRDT-------VVAIKRRVGSP---RQEFVAEVTYLSEIRHRNLVT 143
+IG G F V + + R+T +V + + SP ++ E + ++H ++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSI----ALGAAKGLCH 199
LL +G +VFE++ +C +E + + + V+ + A CH
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLC---FEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPE 257
++ ++H++ K VL+ + G + + E+G G V F PE
Sbjct: 150 DNN----IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 205
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
V + + + D++ GV L L++G + +E +I+ + +++ +
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKG-KYKMNPRQW------ 258
Query: 318 GTFTTEGMRDLIRLTLQCMSSPGRR 342
+ +E +DL+R L M P R
Sbjct: 259 -SHISESAKDLVRRML--MLDPAER 280
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 146
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 147 -----ALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 11/175 (6%)
Query: 112 VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY 171
++ K+ Q+ E ++H N+V L + G+ L+F+ + G + +
Sbjct: 54 IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI- 112
Query: 172 ETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENF---IAKVA 228
E ++ + + L A LH + +VH++ K N+L+ K+A
Sbjct: 113 -VAREYYSEADASHCIQQILEAV-----LHCHQMGVVHRDLKPENLLLASKLKGAAVKLA 166
Query: 229 DTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
D G++ +E ++A + PEV + + D+++ GV L L+ G
Sbjct: 167 DFGLAIEVEGEQQAWFGFAGTPG-YLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQR 186
E +S + H V L Q + Y NG + ++ + G E+ T+ +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
VS L +LH ++H++ K N+L++E+ ++ D G +K+L + ++
Sbjct: 142 VS-------ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 247 GSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ + PE+ + SD+++ G + +LV G
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 140
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + E S V
Sbjct: 141 -----ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFV 192
Query: 251 NV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 175 LESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISK 234
+ES L + I + + H+H KPP++H++ K N+L+ K+ D G +
Sbjct: 127 MESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186
Query: 235 LLENIEEAGPSHG-----------SIVNVFRDPEVEE---SGVFSEMSDIYSFGVFLLEL 280
+ + + S + ++R PE+ + + E DI++ G L L
Sbjct: 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLL 246
Query: 281 VTGQ 284
Q
Sbjct: 247 CFRQ 250
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 129 EVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQR 186
E +S + H V L Q + Y NG + ++ + G E+ T+ +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSH 246
VS L +LH ++H++ K N+L++E+ ++ D G +K+L + ++
Sbjct: 142 VS-------ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 247 GSIVNV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ + PE+ + SD+++ G + +LV G
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 110/265 (41%), Gaps = 33/265 (12%)
Query: 94 LIGFGSFGPVYKGLLRDT-------VVAIKRRVGSP---RQEFVAEVTYLSEIRHRNLVT 143
+IG G F V + + R+T +V + + SP ++ E + ++H ++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSI----ALGAAKGLCH 199
LL +G +VFE++ +C +E + + + V+ + A CH
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLC---FEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPE 257
++ ++H++ K VL+ + G + + E+G G V F PE
Sbjct: 148 DNN----IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 258 VEESGVFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQWVRSRLSSNNFVDHRLA 317
V + + + D++ GV L L++G + +E +I+ + +++ +
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKG-KYKMNPRQW------ 256
Query: 318 GTFTTEGMRDLIRLTLQCMSSPGRR 342
+ +E +DL+R L M P R
Sbjct: 257 -SHISESAKDLVRRML--MLDPAER 278
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 144
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 145 -----ALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 143
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 144 -----ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 141
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 142 -----ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 143
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 144 -----ALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 143
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 144 -----ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 141
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 142 -----ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 141
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 142 -----ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 95 IGFGSFGPVYKGLLRDT----VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYC 148
IG G+FG L+RD +VA+K R + E+ +RH N+V
Sbjct: 26 IGSGNFG--VARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 83
Query: 149 QQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKPP 206
+ +V EY G + + G E + F+Q +S G+ + H+++
Sbjct: 84 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYCHAMQ-- 134
Query: 207 LVHKNFKTANVLVDENFIA--KVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N L+D + K+ D G SK ++ + P + PEV +
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLLKKEY 192
Query: 265 S-EMSDIYSFGVFLLELVTG 283
+++D++S GV L ++ G
Sbjct: 193 DGKVADVWSCGVTLYVMLVG 212
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 95 IGFGSFGPVYKGLLRDT--VVAIK---RRVGSPRQEF---VAEVTYLSEIRHRNLVTLLG 146
IG GSFG V DT + A+K ++ R E E+ + + H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 147 YCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPP 206
Q +V + L G + HL + + FK+ ++ L + + L L+
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQN-------VHFKEE-TVKLFICELVMALDYLQNQ 134
Query: 207 -LVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV---EESG 262
++H++ K N+L+DE+ + D I+ +L + G+ + PE+ +
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGT--KPYMAPEMFSSRKGA 192
Query: 263 VFSEMSDIYSFGVFLLELVTGQEASHIVSLGSYEALIQ 300
+S D +S GV EL+ G+ HI S S + ++
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 121
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSI- 249
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 122 -----ALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 250 VNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 120
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 121 -----ALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 119
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 120 -----ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 111 TVVAIKRRVGSPRQEFVAEVTYLSEIR-HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNH 169
V I+++ G R EV L + + HRN++ L+ + ++ LVFE + GS+ +H
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 170 LYE----TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDE-NFI 224
+++ LE+S + A L LH+ + H++ K N+L + N +
Sbjct: 102 IHKRRHFNELEASV---------VVQDVASALDFLHNKG--IAHRDLKPENILCEHPNQV 150
Query: 225 A--KVADTGISKLLENIEEAGP-SHGSIVNV-----FRDPEV-----EESGVFSEMSDIY 271
+ K+ D G+ ++ + P S ++ + PEV EE+ ++ + D++
Sbjct: 151 SPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLW 210
Query: 272 SFGVFLLELVTG 283
S GV L L++G
Sbjct: 211 SLGVILYILLSG 222
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 118
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 119 -----ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 140
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 141 -----ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 133 LSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIA 190
+S + H V L Q + Y NG + ++ + G E+ T+ + VS
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 125
Query: 191 LGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIV 250
L +LH ++H++ K N+L++E+ ++ D G +K+L + ++ +
Sbjct: 126 -----ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 251 NV-FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ PE+ + SD+++ G + +LV G
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 30/203 (14%)
Query: 95 IGFGSFGPVYKGLLRDT----VVAIKRRVGSPRQEFVA-----EVTYLSEIRHRNLVTLL 145
IG G+FG L+RD +VA+K R E +A E+ +RH N+V
Sbjct: 27 IGSGNFG--VARLMRDKQSNELVAVKY---IERGEKIAANVKREIINHRSLRHPNIVRFK 81
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSL 203
+ +V EY G + + G E + F+Q +S G+ + H++
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYCHAM 134
Query: 204 KPPLVHKNFKTANVLVDENFIA--KVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEES 261
+ + H++ K N L+D + K+ D G SK ++ + P + PEV
Sbjct: 135 Q--VCHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLLK 190
Query: 262 GVFS-EMSDIYSFGVFLLELVTG 283
+ +++D++S GV L ++ G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 22/188 (11%)
Query: 111 TVVAIKRRVGSPRQEFVAEVTYLSEIR-HRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNH 169
V I+++ G R EV L + + HRN++ L+ + ++ LVFE + GS+ +H
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 170 LYE----TGLESSTKLEFKQRVSIALG--AAKGLCHLHSLKPPLV---HKNFKTANVLVD 220
+++ LE+S + Q V+ AL KG+ H LKP + H N + + D
Sbjct: 102 IHKRRHFNELEASVVV---QDVASALDFLHNKGIAH-RDLKPENILCEHPNQVSPVKICD 157
Query: 221 ENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEV-----EESGVFSEMSDIYSFGV 275
+ + + G + E P + + PEV EE+ ++ + D++S GV
Sbjct: 158 FDLGSGIKLNGDCSPISTPELLTPCGSA---EYMAPEVVEAFSEEASIYDKRCDLWSLGV 214
Query: 276 FLLELVTG 283
L L++G
Sbjct: 215 ILYILLSG 222
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 187 VSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEE----- 241
+ I + A+ + LHS L+H++ K +N+ + + KV D G+ ++ EE
Sbjct: 167 LHIFIQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 242 ----AGPSHGSIV--NVFRDPEVEESGVFSEMSDIYSFGVFLLELV 281
A +H V ++ PE +S DI+S G+ L EL+
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 75/175 (42%), Gaps = 11/175 (6%)
Query: 112 VVAIKRRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY 171
++ K+ Q+ E ++H N+V L + G+ LVF+ + G + +
Sbjct: 63 IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI- 121
Query: 172 ETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVD---ENFIAKVA 228
E ++ + + L + H+H + +VH++ K N+L+ + K+A
Sbjct: 122 -VAREYYSEADASHCIHQILESVN---HIH--QHDIVHRDLKPENLLLASKCKGAAVKLA 175
Query: 229 DTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
D G++ ++ ++A + PEV + + DI++ GV L L+ G
Sbjct: 176 DFGLAIEVQGEQQAWFGFAGTPG-YLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 115/280 (41%), Gaps = 39/280 (13%)
Query: 72 QGARQFS--MEELEQATKQFSETSLIGFGSFGPVYKGLLR--DTVVAIK---RRVGSPRQ 124
+ A+ F+ ++++ + F +IG G+FG V L+ D V A+K + R
Sbjct: 57 EWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRA 116
Query: 125 E---FVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHL--YETGLESST 179
E F E L + + TL Q + LV +Y G + L +E L
Sbjct: 117 ETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEM 176
Query: 180 KLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGIS-KLLEN 238
+ + IA+ + +H L VH++ K N+L+D N ++AD G KL+E+
Sbjct: 177 ARFYLAEMVIAIDS------VHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228
Query: 239 IEEAGPSHGSIVNVFRD---PEVEES-----GVFSEMSDIYSFGVFLLELVTGQEASHIV 290
G S+ D PE+ ++ G + D +S GV + E++ G+ +
Sbjct: 229 ----GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 291 SLGSYEALIQWVRSRLSSNNFVDHRLAGTFTTEGMRDLIR 330
SL I + R V T +E +DLIR
Sbjct: 285 SLVETYGKIMNHKERFQFPTQV------TDVSENAKDLIR 318
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 98/234 (41%), Gaps = 21/234 (8%)
Query: 58 AGPSSATGQPSFGPQGARQFSMEELEQATKQFSETSLIGFGSFGPVYKGLLRDT--VVAI 115
A P +A+ P + G+ + ++ + F S +G G+ VY+ + T A+
Sbjct: 30 AAPGTASLVPDYWIDGSNRDALSDF------FEVESELGRGATSIVYRCKQKGTQKPYAL 83
Query: 116 KRRVGSPRQEFV-AEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYETG 174
K + ++ V E+ L + H N++ L + LV E + G + + + E G
Sbjct: 84 KVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG 143
Query: 175 LESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVD---ENFIAKVADTG 231
S + + + +LH + +VH++ K N+L + K+AD G
Sbjct: 144 YYSE-----RDAADAVKQILEAVAYLH--ENGIVHRDLKPENLLYATPAPDAPLKIADFG 196
Query: 232 ISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQE 285
+SK++E+ G+ + PE+ + D++S G+ L+ G E
Sbjct: 197 LSKIVEHQVLMKTVCGT--PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE 248
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 119 VGSPRQEFVAEVTYLSEIRHRNLVTLLGYCQQNGYQMLVFEYLPNGSMCN---HLYETGL 175
+ S +F E+ +++I++ +T G +++EY+ N S+ + +
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK 142
Query: 176 ESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKL 235
+ + + I ++H+ K + H++ K +N+L+D+N K++D G S+
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 236 LENIEEAGPSHGSIVNVFRDPEV--EESGVFSEMSDIYSFGVFL 277
+ + + G S G+ F PE ES DI+S G+ L
Sbjct: 202 MVDKKIKG-SRGTY--EFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 24/200 (12%)
Query: 95 IGFGSFGPVYKGLLRDT----VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYC 148
IG G+FG L+RD +VA+K R + E+ +RH N+V
Sbjct: 27 IGSGNFG--VARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 149 QQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKPP 206
+ +V EY G + + G E + F+Q +S G+ + H+++
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYCHAMQ-- 135
Query: 207 LVHKNFKTANVLVDENFIA--KVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVF 264
+ H++ K N L+D + K+ G SK ++ + P + PEV +
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSK--SSVLHSQPKDTVGTPAYIAPEVLLKKEY 193
Query: 265 S-EMSDIYSFGVFLLELVTG 283
+++D++S GV L ++ G
Sbjct: 194 DGKVADVWSCGVTLYVMLVG 213
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 25/238 (10%)
Query: 72 QGARQFS--MEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFV-A 128
+ A+ F+ ++E++ + F +IG G+FG V +++T ++ + + A
Sbjct: 57 EWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRA 116
Query: 129 EVTYLSEIRHR------NLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHL--YETGLESST 179
E E R +T L Y Q + LV +Y G + L +E L
Sbjct: 117 ETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM 176
Query: 180 KLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENI 239
+ + +A+ + +H L VH++ K NVL+D N ++AD G + +
Sbjct: 177 ARFYIGEMVLAIDS------IHQLH--YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD 228
Query: 240 EEAGPSHGSIVNVFRDPEVEES-----GVFSEMSDIYSFGVFLLELVTGQEASHIVSL 292
S + PE+ ++ G + D +S GV + E++ G+ + SL
Sbjct: 229 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 286
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 25/238 (10%)
Query: 72 QGARQFS--MEELEQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFV-A 128
+ A+ F+ ++E++ + F +IG G+FG V +++T ++ + + A
Sbjct: 73 EWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRA 132
Query: 129 EVTYLSEIRHR------NLVTLLGYC-QQNGYQMLVFEYLPNGSMCNHL--YETGLESST 179
E E R +T L Y Q + LV +Y G + L +E L
Sbjct: 133 ETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM 192
Query: 180 KLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENI 239
+ + +A+ + +H L VH++ K NVL+D N ++AD G + +
Sbjct: 193 ARFYIGEMVLAIDS------IHQLH--YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD 244
Query: 240 EEAGPSHGSIVNVFRDPEVEES-----GVFSEMSDIYSFGVFLLELVTGQEASHIVSL 292
S + PE+ ++ G + D +S GV + E++ G+ + SL
Sbjct: 245 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 302
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 92 TSLIGFGSFGPVYKGL-LRD----TVVAIKRRVGSPRQEFVAEVTYLSEIR-HRNLVTLL 145
+ L+G G++ V + L++ V I+++ G R EV L + + ++N++ L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 146 GYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKP 205
+ + + LVFE L GS+ H ++ ++ + A L LH+
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAH-----IQKQKHFNEREASRVVRDVAAALDFLHT--K 130
Query: 206 PLVHKNFKTANVLVDE-NFIAKVA----DTGISKLLEN------IEEAGPSHGS------ 248
+ H++ K N+L + ++ V D G L N E GS
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 249 -IVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+V VF D ++ + + D++S GV L +++G
Sbjct: 191 EVVEVFTD----QATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 20/198 (10%)
Query: 95 IGFGSFGPVYKGLLRDT----VVAIK--RRVGSPRQEFVAEVTYLSEIRHRNLVTLLGYC 148
IG G+FG L+RD +VA+K R + E+ +RH N+V
Sbjct: 27 IGSGNFG--VARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 149 QQNGYQMLVFEYLPNGSMCNHLYETGL--ESSTKLEFKQRVSIALGAAKGLCHLHSLKPP 206
+ +V EY G + + G E + F+Q +S G+ + H+++
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYCHAMQ-- 135
Query: 207 LVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNVFRDPEVEESGVFS- 265
+ H++ K N L+D + ++ ++ + P + PEV +
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 266 EMSDIYSFGVFLLELVTG 283
+++D++S GV L ++ G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3FR7|A Chain A, Ketol-Acid Reductoisomerase (Kari) In Complex With Mg2+
pdb|3FR7|B Chain B, Ketol-Acid Reductoisomerase (Kari) In Complex With Mg2+
pdb|3FR8|A Chain A, Rice Ketolacid Reductoisomerase In Complex With Mg2+-Nadph
pdb|3FR8|B Chain B, Rice Ketolacid Reductoisomerase In Complex With Mg2+-Nadph
Length = 525
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 21/137 (15%)
Query: 82 LEQATKQFSETSLIGFGSFGPVYKGLLRDT--------VVAIKRRVGSPRQE------FV 127
L +A K + +IG+GS GP LRD+ VV I R GS + F
Sbjct: 47 LPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFT 106
Query: 128 AEVTYLSEIRH----RNLVTLL--GYCQQNGYQMLVFEYLPNGSM-CNHLYETGLESSTK 180
E L +I +LV LL Q + Y+ + PN + +H + G S
Sbjct: 107 EESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAG 166
Query: 181 LEFKQRVSIALGAAKGL 197
L+F + +S+ KG+
Sbjct: 167 LDFPKNISVIAVCPKGM 183
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFVAEV---TYLSEIRHR 139
E+ ++ SLIG GSFG V K R + ++ ++ F+ + L E+ ++
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNK 109
Query: 140 N-------LVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYET---GLESSTKLEFKQRVSI 189
+ +V L + + LVFE L + ++ + L T G+ + +F Q++
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLV--DENFIAKVADTGIS-KLLENIEEAGPSH 246
AL L + + ++H + K N+L+ + K+ D G S +L + I + S
Sbjct: 169 AL------LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQS- 221
Query: 247 GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
+R PEV + D++S G L+E+ TG+
Sbjct: 222 ----RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFVAEV---TYLSEIRHR 139
E+ ++ SLIG GSFG V K R + ++ ++ F+ + L E+ ++
Sbjct: 31 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNK 90
Query: 140 N-------LVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYET---GLESSTKLEFKQRVSI 189
+ +V L + + LVFE L + ++ + L T G+ + +F Q++
Sbjct: 91 HDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLV--DENFIAKVADTGIS-KLLENIEEAGPSH 246
AL L + + ++H + K N+L+ + K+ D G S +L + I + S
Sbjct: 150 AL------LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQS- 202
Query: 247 GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
+R PEV + D++S G L+E+ TG+
Sbjct: 203 ----RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 236
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 83 EQATKQFSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFVAEV---TYLSEIRHR 139
E+ ++ SLIG GSFG V K R + ++ ++ F+ + L E+ ++
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNK 109
Query: 140 N-------LVTLLGYCQQNGYQMLVFEYLPNGSMCNHLYET---GLESSTKLEFKQRVSI 189
+ +V L + + LVFE L + ++ + L T G+ + +F Q++
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 190 ALGAAKGLCHLHSLKPPLVHKNFKTANVLV--DENFIAKVADTGIS-KLLENIEEAGPSH 246
AL L + + ++H + K N+L+ + K+ D G S +L + I + S
Sbjct: 169 AL------LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQS- 221
Query: 247 GSIVNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
+R PEV + D++S G L+E+ TG+
Sbjct: 222 ----RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 88/197 (44%), Gaps = 18/197 (9%)
Query: 95 IGFGSFGPVYKGL---LRDTVVAIKRRVGSPRQEFVA-EVTYLSEIRHRNLVTLLGYCQQ 150
+G G FG V++ + + T +A +V Q V E++ L+ RHRN++ L +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 151 NGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHK 210
+++FE++ + + + E L ++ VS + L LHS + H
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFE----LNEREIVSYVHQVCEALQFLHS--HNIGHF 126
Query: 211 NFKTANVLVD--ENFIAKVADTGISKLLENIEEAGPSHGSIVNV--FRDPEVEESGVFSE 266
+ + N++ + K+ + G ++ L + G + + + PEV + V S
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQARQL----KPGDNFRLLFTAPEYYAPEVHQHDVVST 182
Query: 267 MSDIYSFGVFLLELVTG 283
+D++S G + L++G
Sbjct: 183 ATDMWSLGTLVYVLLSG 199
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 80 EELEQATKQFSETSLIGFGSFGPVYKGL-LRDTV-VAIKR----RVGS----PRQEFVA- 128
+E E Q+ L+G G FG VY G+ + D + VAIK R+ P V
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 129 EVTYLSEIR--HRNLVTLLGYCQQNGYQMLVFEYL-PNGSMCNHLYETGLESSTKLEFKQ 185
EV L ++ ++ LL + ++ +L+ E + P + + + E G L+ +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG-----ALQEEL 115
Query: 186 RVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENF-IAKVADTGISKLLENIEEAGP 244
S + + H H+ ++H++ K N+L+D N K+ D G LL++
Sbjct: 116 ARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 170
Query: 245 SHGSIVNVFRDPE-VEESGVFSEMSDIYSFGVFLLELVTGQ 284
+ V+ PE + + ++S G+ L ++V G
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 211
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 32/215 (14%)
Query: 95 IGFGSFGPV-----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEIRHRN------LVT 143
+G G+FG V +K R V I + V + +E+ L + + V
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
+L + + +G+ +VFE L S + + E G +A K + LHS
Sbjct: 82 MLEWFEHHGHICIVFELL-GLSTYDFIKENGF---LPFRLDHIRKMAYQICKSVNFLHSN 137
Query: 204 KPPLVHKNFKTANVL-VDENF-------IAKVADTGISKLLENIEEAGPS-----HGSIV 250
K L H + K N+L V ++ I + T I+ ++ ++ + H ++V
Sbjct: 138 K--LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLV 195
Query: 251 NV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+ +R PEV + +S+ D++S G L+E G
Sbjct: 196 STRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 83/216 (38%), Gaps = 42/216 (19%)
Query: 89 FSETSLIGFGSFGPVYKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEIRH------RNLV 142
FSE +++ G VY + + +KR EV+ E R R +
Sbjct: 74 FSEVAVVKMKQTGQVYAMKIMNKWDMLKR----------GEVSCFREERDVLVNGDRRWI 123
Query: 143 TLLGYC-QQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLE--FKQRVSIALGAAKGLCH 199
T L + Q Y LV EY G + L + G ++ + + +A+ + L +
Sbjct: 124 TQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY 183
Query: 200 LHSLKPPLVHKNFKTANVLVDENFIAKVADTGISKLLENIEEAGPSHGSIVNV----FRD 255
VH++ K N+L+D ++AD G L A + S+V V +
Sbjct: 184 --------VHRDIKPDNILLDRCGHIRLADFGSCLKL----RADGTVRSLVAVGTPDYLS 231
Query: 256 PEVEESGVFSEM-------SDIYSFGVFLLELVTGQ 284
PE+ ++ D ++ GVF E+ GQ
Sbjct: 232 PEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 209 HKNFKTANVLVDENFIAKVADTGISKLL--ENIEEAGPSHGSIVNVFRDPEVEESGVFSE 266
H++ K N+LV + A + D GI+ E + + G + G++ + PE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTL--YYXAPERFSESHATY 214
Query: 267 MSDIYSFGVFLLELVTG 283
+DIY+ L E +TG
Sbjct: 215 RADIYALTCVLYECLTG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 34/215 (15%)
Query: 95 IGFGSFGPVY--KGLLRDTVVAIKRRVGSPRQEFVAE--VTYLSEIRH-----------R 139
+G+G F V+ K ++ +T VA+K G AE + L +
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 86
Query: 140 NLVTLLGYCQQNG----YQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
+++ LL + G + ++VFE L G L + L + +++S L
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVL--GENLLALIKKYEHRGIPLIYVKQISKQL--LL 142
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVD-----ENFIA-KVADTGISKLLENIEEAGPSHGSI 249
GL ++H + ++H + K NVL++ EN I K+AD G + + ++
Sbjct: 143 GLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE----HYTNSIQ 197
Query: 250 VNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
+R PEV + +DI+S + EL+TG
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 34/215 (15%)
Query: 95 IGFGSFGPVY--KGLLRDTVVAIKRRVGSPRQEFVAE--VTYLSEIRH-----------R 139
+G+G F V+ K ++ +T VA+K G AE + L +
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 86
Query: 140 NLVTLLGYCQQNG----YQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAK 195
+++ LL + G + ++VFE L G L + L + +++S L
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVL--GENLLALIKKYEHRGIPLIYVKQISKQL--LL 142
Query: 196 GLCHLHSLKPPLVHKNFKTANVLVD-----ENFIA-KVADTGISKLLENIEEAGPSHGSI 249
GL ++H + ++H + K NVL++ EN I K+AD G + + ++
Sbjct: 143 GLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE----HYTNSIQ 197
Query: 250 VNVFRDPEVEESGVFSEMSDIYSFGVFLLELVTGQ 284
+R PEV + +DI+S + EL+TG
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 32/215 (14%)
Query: 95 IGFGSFGPV-----YKGLLRDTVVAIKRRVGSPRQEFVAEVTYLSEIRHRN------LVT 143
+G G+FG V +K R V I + V + +E+ L + + V
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 144 LLGYCQQNGYQMLVFEYLPNGSMCNHLYETGLESSTKLEFKQRVSIALGAAKGLCHLHSL 203
+L + + +G+ +VFE L S + + E G +A K + LHS
Sbjct: 82 MLEWFEHHGHICIVFELL-GLSTYDFIKENGF---LPFRLDHIRKMAYQICKSVNFLHSN 137
Query: 204 KPPLVHKNFKTANVL-VDENF-------IAKVADTGISKLLENIEEAGPS-----HGSIV 250
K L H + K N+L V ++ I + T I+ ++ ++ + H ++V
Sbjct: 138 K--LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLV 195
Query: 251 NV--FRDPEVEESGVFSEMSDIYSFGVFLLELVTG 283
+R PEV + +S+ D++S G L+E G
Sbjct: 196 XXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 96/242 (39%), Gaps = 40/242 (16%)
Query: 64 TGQPSFGPQGARQFSMEEL--EQATKQFSETSLIGFGSFGPVYKG----LLRDTVVAIKR 117
TG P+ G Q S ++ + ++ +IG GSFG V K + + + + R
Sbjct: 72 TGGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR 131
Query: 118 RVGSPRQEFVAEVTYLSEIRHR------NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY 171
++ E+ L +R + N++ +L + + FE L SM +LY
Sbjct: 132 NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL---SM--NLY 186
Query: 172 E-------TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFI 224
E G +F + L A LH K ++H + K N+L+ +
Sbjct: 187 ELIKKNKFQGFSLPLVRKFAHSILQCLDA------LH--KNRIIHCDLKPENILLKQQGR 238
Query: 225 A--KVADTGISKLLENIEEAGPSHGSIVNVF-RDPEVEESGVFSEMSDIYSFGVFLLELV 281
+ KV D G S E + I + F R PEV + D++S G L EL+
Sbjct: 239 SGIKVIDFGSS-----CYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELL 293
Query: 282 TG 283
TG
Sbjct: 294 TG 295
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 96/242 (39%), Gaps = 40/242 (16%)
Query: 64 TGQPSFGPQGARQFSMEEL--EQATKQFSETSLIGFGSFGPVYKG----LLRDTVVAIKR 117
TG P+ G Q S ++ + ++ +IG GSFG V K + + + + R
Sbjct: 72 TGGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR 131
Query: 118 RVGSPRQEFVAEVTYLSEIRHR------NLVTLLGYCQQNGYQMLVFEYLPNGSMCNHLY 171
++ E+ L +R + N++ +L + + FE L SM +LY
Sbjct: 132 NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL---SM--NLY 186
Query: 172 E-------TGLESSTKLEFKQRVSIALGAAKGLCHLHSLKPPLVHKNFKTANVLVDENFI 224
E G +F + L A LH K ++H + K N+L+ +
Sbjct: 187 ELIKKNKFQGFSLPLVRKFAHSILQCLDA------LH--KNRIIHCDLKPENILLKQQGR 238
Query: 225 A--KVADTGISKLLENIEEAGPSHGSIVNVF-RDPEVEESGVFSEMSDIYSFGVFLLELV 281
+ KV D G S E + I + F R PEV + D++S G L EL+
Sbjct: 239 SGIKVIDFGSS-----CYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELL 293
Query: 282 TG 283
TG
Sbjct: 294 TG 295
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,352,282
Number of Sequences: 62578
Number of extensions: 415383
Number of successful extensions: 3051
Number of sequences better than 100.0: 945
Number of HSP's better than 100.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 480
Number of HSP's that attempted gapping in prelim test: 1471
Number of HSP's gapped (non-prelim): 967
length of query: 382
length of database: 14,973,337
effective HSP length: 101
effective length of query: 281
effective length of database: 8,652,959
effective search space: 2431481479
effective search space used: 2431481479
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)