Query 016790
Match_columns 382
No_of_seqs 166 out of 1511
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 02:50:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016790.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016790hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0700 Protein phosphatase 2C 100.0 2.5E-50 5.5E-55 384.1 24.2 293 16-312 49-388 (390)
2 PLN03145 Protein phosphatase 2 100.0 4.2E-45 9.2E-50 356.9 29.3 249 35-340 68-334 (365)
3 KOG0698 Serine/threonine prote 100.0 8E-43 1.7E-47 338.7 28.9 250 34-342 42-310 (330)
4 KOG0697 Protein phosphatase 1B 100.0 4.9E-43 1.1E-47 316.6 21.1 257 33-342 23-297 (379)
5 PTZ00224 protein phosphatase 2 100.0 1.2E-41 2.5E-46 333.8 28.7 243 34-339 24-274 (381)
6 PF00481 PP2C: Protein phospha 100.0 9.2E-43 2E-47 327.3 18.5 233 34-303 2-250 (254)
7 COG0631 PTC1 Serine/threonine 100.0 6.4E-40 1.4E-44 308.7 25.0 228 36-339 13-255 (262)
8 KOG0699 Serine/threonine prote 100.0 2.3E-36 5E-41 281.9 18.9 175 124-340 328-507 (542)
9 cd00143 PP2Cc Serine/threonine 100.0 1E-34 2.2E-39 270.7 26.7 239 34-335 3-254 (254)
10 PRK14559 putative protein seri 100.0 7.9E-35 1.7E-39 300.5 26.5 235 34-340 377-639 (645)
11 smart00332 PP2Cc Serine/threon 100.0 1.8E-34 3.9E-39 269.7 25.8 235 36-333 10-255 (255)
12 KOG1323 Serine/threonine phosp 99.9 3.6E-25 7.7E-30 205.3 20.2 249 55-339 142-490 (493)
13 KOG1379 Serine/threonine prote 99.9 4.5E-24 9.8E-29 198.1 20.5 223 43-335 89-330 (330)
14 PF13672 PP2C_2: Protein phosp 99.8 4.6E-19 9.9E-24 161.6 14.4 185 37-285 4-194 (212)
15 KOG0618 Serine/threonine phosp 99.8 1.4E-18 3E-23 180.3 16.6 219 53-339 547-775 (1081)
16 smart00331 PP2C_SIG Sigma fact 99.7 8.7E-16 1.9E-20 137.9 18.6 166 36-286 8-176 (193)
17 TIGR02865 spore_II_E stage II 99.6 2.1E-13 4.6E-18 145.8 21.8 194 37-335 559-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.4 7.5E-11 1.6E-15 105.6 19.8 180 55-336 2-193 (193)
19 COG2208 RsbU Serine phosphatas 98.4 3.2E-05 6.9E-10 76.7 20.0 202 34-336 151-366 (367)
20 PRK10693 response regulator of 75.2 62 0.0013 30.9 12.7 103 39-152 144-253 (303)
21 KOG3799 Rab3 effector RIM1 and 46.1 9.3 0.0002 32.0 0.8 25 4-28 89-114 (169)
22 PF09436 DUF2016: Domain of un 39.1 18 0.0004 27.0 1.4 28 246-274 13-42 (72)
23 COG2168 DsrH Uncharacterized c 29.7 55 0.0012 25.9 2.7 34 252-286 19-52 (96)
24 PF01436 NHL: NHL repeat; Int 28.0 1.2E+02 0.0026 17.7 3.5 20 134-153 9-28 (28)
25 KOG0720 Molecular chaperone (D 23.2 43 0.00093 34.0 1.3 22 4-25 349-370 (490)
26 PRK06369 nac nascent polypepti 23.2 2.3E+02 0.0051 23.2 5.4 43 243-285 38-87 (115)
No 1
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-50 Score=384.13 Aligned_cols=293 Identities=49% Similarity=0.819 Sum_probs=261.8
Q ss_pred CCCCceeeccCCCCCcCCcceeeeccC-------cccccceeee--cCCCceEEEEEcCCChhHHHHHHHHHHHHHHHH-
Q 016790 16 GGDGLMWHSDLKPHASGDYSIAVVQAN-------SCLEDQSQVF--TSPSATYVGVYDGHGGPEASRFVNKHLFPYLHK- 85 (382)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~r-------~~~eD~~~~~--~~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~- 85 (382)
..+++-|-++...+..+.++.++.+.+ ..-||+..+. ...++.|+||||||||..++++++++|..++..
T Consensus 49 ~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~ 128 (390)
T KOG0700|consen 49 SVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARE 128 (390)
T ss_pred CcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHH
Confidence 447789999999999999999888875 4555665444 366778999999999999999999999999882
Q ss_pred -----------HHhh--------------------c-CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccceEEEE
Q 016790 86 -----------FAME--------------------H-GGLSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVG 133 (382)
Q Consensus 86 -----------~~~~--------------------~-~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~~~GtT~v~~ 133 (382)
+..+ . .....++|.+||.+++++|.....+.+...+..+.+|+||+++
T Consensus 129 L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~ 208 (390)
T KOG0700|consen 129 LQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVG 208 (390)
T ss_pred hhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEE
Confidence 2222 1 3556789999999999999999999999999999999999999
Q ss_pred EEECCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHHHHHHHHHhCCCCCCeEEeecCeeeecCccccccc
Q 016790 134 AISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRS 213 (382)
Q Consensus 134 ~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~~~~~~g~~~~~g~l~vtRa 213 (382)
++.+..|||||+|||||+|....++++ .+..+|||.||+..++.|++||...||....++.... ||+.|.|++|||
T Consensus 209 ~i~~~~LyVaN~GDSRAVLG~~~~~~~--~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~--~RvkG~L~vsRA 284 (390)
T KOG0700|consen 209 LIKGGDLYVANVGDSRAVLGVVENNGS--WLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKH--WRVKGILQVSRA 284 (390)
T ss_pred EEeCCeEEEEecCcchhhhceecCCCC--eEEEEecChhhccccHHHHHHHHHhCCCCcceEeecc--ceeeEEEEeeee
Confidence 999999999999999999988775443 4789999999999999999999999999998888876 999999999999
Q ss_pred cccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeEEEEecCccccCCCHHHHHHHHHc-----CCcc
Q 016790 214 IGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCK-----NPRA 288 (382)
Q Consensus 214 lGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~fLlLaSDGlwd~l~~~ei~~iv~~-----~~~~ 288 (382)
|||..+|++.+...+++..|..+.++++|+|+++|.++.++|.+.|+||||+||||||+|+++|++.+|.+ .+.+
T Consensus 285 fGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~ 364 (390)
T KOG0700|consen 285 FGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDG 364 (390)
T ss_pred ccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 6778
Q ss_pred cHHHHHHHHHHHHHHHhchhhhhH
Q 016790 289 GIAKRLVRAALQEAARKREVGYKE 312 (382)
Q Consensus 289 ~~a~~Lv~~Al~~~~~~~~~~~~~ 312 (382)
+.|++|++.|+..+++++++.+++
T Consensus 365 ~~A~hLIr~aL~~aakk~~~r~s~ 388 (390)
T KOG0700|consen 365 NPATHLIRHALGRAAKKRGMRLSD 388 (390)
T ss_pred CHHHHHHHHHHhhhhhhccccHhh
Confidence 899999999999999877666554
No 2
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=4.2e-45 Score=356.92 Aligned_cols=249 Identities=28% Similarity=0.409 Sum_probs=199.3
Q ss_pred ceeeecc-CcccccceeeecC------------CCceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHH
Q 016790 35 SIAVVQA-NSCLEDQSQVFTS------------PSATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEHGGLSAEVIKKA 101 (382)
Q Consensus 35 ~~~~~~~-r~~~eD~~~~~~~------------~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~~~~~l~~a 101 (382)
+..+.+| |+.|||+|++..+ .+..||||||||||+.+|++|+++++..|.+.... .....++|+++
T Consensus 68 ~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~-~~~~~~al~~a 146 (365)
T PLN03145 68 GAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDF-PREIEKVVSSA 146 (365)
T ss_pred EEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHH
Confidence 3344444 9999999876531 23579999999999999999999999998764322 22356779999
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCccccceEEEEEEECCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHHHH
Q 016790 102 FHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVR 181 (382)
Q Consensus 102 ~~~~~~~i~~~~~~~~~~~~~~~~~GtT~v~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~ 181 (382)
|.++++++.+... . .....+|||+++++|.++.+|++||||||+|+++.+ ++++||+||++.++.|+
T Consensus 147 f~~~d~~~~~~~~----~-~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g--------~~~~LT~DH~~~~~~E~ 213 (365)
T PLN03145 147 FLQTDTAFAEACS----L-DASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG--------KAIEMSRDHKPMCSKER 213 (365)
T ss_pred HHHHhHHHHhhhc----c-ccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC--------eEEEecCCCCCCCHHHH
Confidence 9999998876321 1 122348999999999999999999999999999988 89999999999999999
Q ss_pred HHHHHhCCCCCCeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeE
Q 016790 182 KEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLF 261 (382)
Q Consensus 182 ~ri~~~~p~~~~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~f 261 (382)
+||.+.+ +.+.. .+++|.+++||||||..+|... ....+.++++|++..+++.++|.|
T Consensus 214 ~RI~~~G----g~v~~----g~v~g~l~vTRalGD~~~k~~k--------------~~~~~~vs~ePdv~~~~l~~~D~f 271 (365)
T PLN03145 214 KRIEASG----GYVYD----GYLNGQLNVARALGDWHMEGMK--------------GSDGGPLSAEPELMTTQLTEEDEF 271 (365)
T ss_pred HHHHHcC----Cceec----ceECCccccccccccccccccc--------------cccCCCcceEEEEEEEECCCCCEE
Confidence 9998874 33322 2788999999999998776421 011234789999999999999999
Q ss_pred EEEecCccccCCCHHHHHHHHHc----C-CcccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEEEeC
Q 016790 262 LIFASDGLWEQLTDEAAVEIVCK----N-PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLD 336 (382)
Q Consensus 262 LlLaSDGlwd~l~~~ei~~iv~~----~-~~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi~l~ 336 (382)
||||||||||+|+++++++++++ . .+..+|+.|++.|+. +++.||||||||+|+
T Consensus 272 LILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~---------------------rgs~DNITvIVV~l~ 330 (365)
T PLN03145 272 LIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALK---------------------RKSGDNLAVVVVCFQ 330 (365)
T ss_pred EEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh---------------------CCCCCCEEEEEEEee
Confidence 99999999999999999777654 2 345678899999877 457999999999999
Q ss_pred CCCC
Q 016790 337 HHQK 340 (382)
Q Consensus 337 ~~~~ 340 (382)
..++
T Consensus 331 ~~~~ 334 (365)
T PLN03145 331 SQPP 334 (365)
T ss_pred cCCC
Confidence 8654
No 3
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=8e-43 Score=338.74 Aligned_cols=250 Identities=38% Similarity=0.571 Sum_probs=208.0
Q ss_pred cceeeecc-Ccccccceeeec--------CC-CceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhcCC--CcHHHHHHH
Q 016790 34 YSIAVVQA-NSCLEDQSQVFT--------SP-SATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEHGG--LSAEVIKKA 101 (382)
Q Consensus 34 ~~~~~~~~-r~~~eD~~~~~~--------~~-~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~--~~~~~l~~a 101 (382)
++++..++ |..|||++.... .. +..+|||||||||+.+|+++.++|+..+.+....... ..+.+++++
T Consensus 42 ~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~ 121 (330)
T KOG0698|consen 42 GSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRA 121 (330)
T ss_pred eEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHH
Confidence 34556666 888999986661 22 4689999999999999999999999999987665443 368899999
Q ss_pred HH-HHHHHHHHHHHhhCCCCCCCccccceEEEEEEECC-EEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHH
Q 016790 102 FH-ATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISND-VLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEE 179 (382)
Q Consensus 102 ~~-~~~~~i~~~~~~~~~~~~~~~~~GtT~v~~~i~~~-~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~ 179 (382)
|. .+++++... ......+|||++++++.++ +|||||+|||||+|++.+ + ...+||.||++..+.
T Consensus 122 F~~~~D~~~~~~-------~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~---~----~a~~Ls~DHkP~~~~ 187 (330)
T KOG0698|consen 122 FLTKTDSEFLEK-------REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKG---G----VAVQLSVDHKPDRED 187 (330)
T ss_pred HHHHHHHHHHhh-------ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCC---C----eeeeCCCCCCCCcHH
Confidence 99 699988874 1113457888888888755 999999999999999875 1 799999999999999
Q ss_pred HHHHHHHhCCCCCCeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCC
Q 016790 180 VRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQD 259 (382)
Q Consensus 180 e~~ri~~~~p~~~~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d 259 (382)
|++||.+. +|.+....+.||++|.|++||+|||..+|. +.|+++|++....+.+.|
T Consensus 188 E~~RI~~~----GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~--------------------~~v~a~Pei~~~~~~~~d 243 (330)
T KOG0698|consen 188 ERERIEAA----GGRVSNWGGVWRVNGVLAVSRAFGDVELKS--------------------QGVIAEPEIQQVKINSDD 243 (330)
T ss_pred HHHHHHHc----CCEEEEcCCcceEeceEEEeeecCCHHhcC--------------------CcEecCCceEEEEcCCCC
Confidence 99999998 577777777899999999999999999864 459999999999999999
Q ss_pred eEEEEecCccccCCCHHHHHHHHHcC-----CcccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEEE
Q 016790 260 LFLIFASDGLWEQLTDEAAVEIVCKN-----PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIY 334 (382)
Q Consensus 260 ~fLlLaSDGlwd~l~~~ei~~iv~~~-----~~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi~ 334 (382)
+||||+||||||+|+++|++++++.. ....++..|...|+. |++.||||||||.
T Consensus 244 eFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~---------------------~~s~DnitvvvV~ 302 (330)
T KOG0698|consen 244 EFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALS---------------------RGSKDNITVVVVR 302 (330)
T ss_pred cEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhh---------------------cCCCCCeEEEEEE
Confidence 99999999999999999999999984 233455566555554 6689999999999
Q ss_pred eCCCCCCC
Q 016790 335 LDHHQKGS 342 (382)
Q Consensus 335 l~~~~~~~ 342 (382)
|.+..+..
T Consensus 303 l~~~~~~~ 310 (330)
T KOG0698|consen 303 LKSSPKSP 310 (330)
T ss_pred ecCccccc
Confidence 99886533
No 4
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-43 Score=316.57 Aligned_cols=257 Identities=23% Similarity=0.380 Sum_probs=212.3
Q ss_pred Ccceeeecc-Ccccccceeee-----cCCCceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhcC----C---CcHHHHH
Q 016790 33 DYSIAVVQA-NSCLEDQSQVF-----TSPSATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEHG----G---LSAEVIK 99 (382)
Q Consensus 33 ~~~~~~~~~-r~~~eD~~~~~-----~~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~~----~---~~~~~l~ 99 (382)
+|+++++|| |-.|||++... ..+++.+|+|||||.|++.|.+++++|.+.+........ . +.+.-|+
T Consensus 23 ryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~~~~GIr 102 (379)
T KOG0697|consen 23 RYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVENVEKGIR 102 (379)
T ss_pred eeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHHHHhhHh
Confidence 499999999 99999999877 357789999999999999999999999999876443322 1 3456678
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCccccceEEEEEEECCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHH
Q 016790 100 KAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEE 179 (382)
Q Consensus 100 ~a~~~~~~~i~~~~~~~~~~~~~~~~~GtT~v~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~ 179 (382)
..|.+.++-+..... ......++|||++.+++...++|++|+||||++++|++ ....-|+||+|.++.
T Consensus 103 tGFL~iDE~mr~~~~----~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng--------~~~f~TqDHKP~~p~ 170 (379)
T KOG0697|consen 103 TGFLSIDEIMRTLSD----ISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNG--------EVVFSTQDHKPYLPK 170 (379)
T ss_pred hcceeHHHHHhhhhh----hhcccccCCceEEEEEecCceEEEEecCcchhheecCC--------ceEEeccCCCCCChH
Confidence 888888877665432 22233458999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHhCCCCCCeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCC
Q 016790 180 VRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQD 259 (382)
Q Consensus 180 e~~ri~~~~p~~~~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d 259 (382)
|++||+.++ |-+-.+ |++|.|+++|||||+.||... ..++..++|+++|++..+.-...|
T Consensus 171 EkeRIqnAG----GSVMIq----RvNGsLAVSRAlGDydyK~v~------------~kgp~eQlVSPEPev~~~~R~eed 230 (379)
T KOG0697|consen 171 EKERIQNAG----GSVMIQ----RVNGSLAVSRALGDYDYKNVP------------GKGPTEQLVSPEPEVYIIERSEED 230 (379)
T ss_pred HHHHHhcCC----CeEEEE----EecceeeeehhccCcccccCC------------CCCchhcccCCCCceEEeeccccC
Confidence 999999874 333332 999999999999999998754 245678999999999999988888
Q ss_pred eEEEEecCccccCCCHHHHHHHHHcCC-----cccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEEE
Q 016790 260 LFLIFASDGLWEQLTDEAAVEIVCKNP-----RAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIY 334 (382)
Q Consensus 260 ~fLlLaSDGlwd~l~~~ei~~iv~~~~-----~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi~ 334 (382)
+|||||+||+||+|+++|+.++++... ....+...++..|- .|+.||+|+|+|.
T Consensus 231 eFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLh---------------------KGSRDNMsivlvc 289 (379)
T KOG0697|consen 231 EFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLH---------------------KGSRDNMSIVLVC 289 (379)
T ss_pred cEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHh---------------------ccCccCceEEEEe
Confidence 899999999999999999999999852 34455555555555 3478999999999
Q ss_pred eCCCCCCC
Q 016790 335 LDHHQKGS 342 (382)
Q Consensus 335 l~~~~~~~ 342 (382)
|...++..
T Consensus 290 fp~APkv~ 297 (379)
T KOG0697|consen 290 FPGAPKVS 297 (379)
T ss_pred cCCCCCCC
Confidence 98876543
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.2e-41 Score=333.82 Aligned_cols=243 Identities=26% Similarity=0.350 Sum_probs=197.2
Q ss_pred cceeeecc-CcccccceeeecCCCceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHH
Q 016790 34 YSIAVVQA-NSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEHGGLSAEVIKKAFHATEEEFLRL 112 (382)
Q Consensus 34 ~~~~~~~~-r~~~eD~~~~~~~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~i~~~ 112 (382)
|..+..+| |+.|||+|++...++..||||||||||..+|+++++.|...+.+.. .....+.|++++..+++++.+.
T Consensus 24 ~g~~s~~G~R~~nED~~~v~~~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~---~~~~~~~l~~a~~~~d~~i~~~ 100 (381)
T PTZ00224 24 CASACVNGYRESMEDAHLLYLTDDWGFFGVFDGHVNDECSQYLARAWPQALEKEP---EPMTDERMEELCLEIDEEWMDS 100 (381)
T ss_pred EEEEeCCCCCCCCCCeeEeccCCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcc---ccccHHHHHHHHHHHHHHHHhc
Confidence 44455555 9999999988766677899999999999999999999998876432 2223566899999999888752
Q ss_pred HHhhCCCCCCCccccceEEEEEEE-CCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHHHHHHHHHhCCCC
Q 016790 113 VKRVLPVRPQIASVGSCCLVGAIS-NDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDD 191 (382)
Q Consensus 113 ~~~~~~~~~~~~~~GtT~v~~~i~-~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~ 191 (382)
. ..+|||+++++|. ++.+||+||||||+|+++.+ ++++||+||++.++.|+.||.+.+
T Consensus 101 ~----------~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g--------~~~~LT~DH~~~~~~E~~RI~~~g--- 159 (381)
T PTZ00224 101 G----------REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDG--------KLVFATEDHKPNNPGERQRIEACG--- 159 (381)
T ss_pred c----------cCCCCeEEEEEEEECCEEEEEEcccceEEEEECC--------EEEEcccCCCCCCHHHHhHHHHcc---
Confidence 1 1358999888776 67999999999999999988 899999999999999999998763
Q ss_pred CCeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeEEEEecCcccc
Q 016790 192 SHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWE 271 (382)
Q Consensus 192 ~~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~fLlLaSDGlwd 271 (382)
+.+.. .|++|.+++|||||+..+|..+. .++..+.|+++|++..+++.++| |||||||||||
T Consensus 160 -g~v~~----~Rv~G~l~vTRalGd~~~K~~~~------------~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d 221 (381)
T PTZ00224 160 -GRVVS----NRVDGDLAVSRAFGDRSFKVKGT------------GDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFE 221 (381)
T ss_pred -CEecc----ccccCceeeecccCCcccccccc------------cccccCcceeeeEEEEEECCCCC-EEEEECCCcCc
Confidence 33222 38889899999999988876531 12334568999999999999988 88889999999
Q ss_pred -CCCHHHHHHHHHc-----CCcccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEEEeCCCC
Q 016790 272 -QLTDEAAVEIVCK-----NPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQ 339 (382)
Q Consensus 272 -~l~~~ei~~iv~~-----~~~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi~l~~~~ 339 (382)
+++++|+.+++.+ ...+.+|..|++.|+. +|+.||||||||+|...+
T Consensus 222 ~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~---------------------rGs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 222 GNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIR---------------------RGSKDNISCLIVQLKDGA 274 (381)
T ss_pred CccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh---------------------cCCCCCEEEEEEEeeCCC
Confidence 7999999999974 2345678899999877 457999999999997754
No 6
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=9.2e-43 Score=327.29 Aligned_cols=233 Identities=34% Similarity=0.554 Sum_probs=187.7
Q ss_pred cceeeecc-Ccccccceeeec-------CCCceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhcCC-CcHHHHHHHHHH
Q 016790 34 YSIAVVQA-NSCLEDQSQVFT-------SPSATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEHGG-LSAEVIKKAFHA 104 (382)
Q Consensus 34 ~~~~~~~~-r~~~eD~~~~~~-------~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~-~~~~~l~~a~~~ 104 (382)
|+++..++ |+.|||++++.. ..+..+|||||||||..+++++++.+...+......... ...++|+.+|..
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~~ 81 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFLA 81 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceeee
Confidence 56666677 999999998884 345689999999999999999999999988887665554 578889999999
Q ss_pred -HHHHHHHHHHhhCCCCCCCccccceEEEEEEECCEEEEEEcCCceeEEeeeecCCCCceEEEE-eccCCCCCCCHHHHH
Q 016790 105 -TEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAE-RLSTDHNVGVEEVRK 182 (382)
Q Consensus 105 -~~~~i~~~~~~~~~~~~~~~~~GtT~v~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~-~LT~dH~~~~~~e~~ 182 (382)
+++.+...... . ....+|||+++++|.+++||+|||||||+|+++.+ ... +||+||++.++.|++
T Consensus 82 ~~~~~~~~~~~~----~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~--------~~~~~Lt~dH~~~~~~E~~ 148 (254)
T PF00481_consen 82 FTDESLYSDSEN----N-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNG--------GIIKQLTRDHKPSNPDERE 148 (254)
T ss_dssp HHHHHHHHHHHH----H-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETT--------EEEEESS---STTSHHHHH
T ss_pred cccccccccccc----c-ccccccccccccccccceeEEEeeeeeeeeeeecc--------ccccccccccccchhhccc
Confidence 88877763221 1 23568999999999999999999999999999999 566 999999999999999
Q ss_pred HHHHhCCCCCCeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeEE
Q 016790 183 EVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFL 262 (382)
Q Consensus 183 ri~~~~p~~~~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~fL 262 (382)
||.+.+ +.+.. .+|+.|.|++||||||..+|.++ ++.|+++|++..+++.++|.||
T Consensus 149 RI~~~g----g~v~~---~~rv~g~l~~sRalGd~~~k~~~-----------------~~~v~~~P~i~~~~l~~~d~fl 204 (254)
T PF00481_consen 149 RIRKAG----GRVSE---NGRVNGVLAVSRALGDFDLKPPG-----------------KPGVIAEPDISEVDLTPDDEFL 204 (254)
T ss_dssp HHHHTT-----GEEE---TEEETTTBSSSB-EE-GGGTTCT-----------------SSSSB---EEEEEEEBTTEEEE
T ss_pred eeeccc----ccccc---chhhhhccccccccccccccccc-----------------cceeeeecccccccccccceEE
Confidence 999985 33333 57999999999999999987532 4579999999999999999999
Q ss_pred EEecCccccCCCHHHHHHHHHcCC-----cccHHHHHHHHHHHHHH
Q 016790 263 IFASDGLWEQLTDEAAVEIVCKNP-----RAGIAKRLVRAALQEAA 303 (382)
Q Consensus 263 lLaSDGlwd~l~~~ei~~iv~~~~-----~~~~a~~Lv~~Al~~~~ 303 (382)
|||||||||+|+++|+++++++.. +..+|+.|++.|+..++
T Consensus 205 vlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~gs 250 (254)
T PF00481_consen 205 VLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIARGS 250 (254)
T ss_dssp EEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTTH
T ss_pred EEEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999863 46789999999988543
No 7
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-40 Score=308.67 Aligned_cols=228 Identities=28% Similarity=0.413 Sum_probs=191.6
Q ss_pred eeeecc-CcccccceeeecCCC---ceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhcCCC-----cHHHHHHHHHHHH
Q 016790 36 IAVVQA-NSCLEDQSQVFTSPS---ATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEHGGL-----SAEVIKKAFHATE 106 (382)
Q Consensus 36 ~~~~~~-r~~~eD~~~~~~~~~---~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~-----~~~~l~~a~~~~~ 106 (382)
.+..+. |..|||++.+..+.+ ..||+|||||||++++++|++.+++.|.+........ ..+.|++++..++
T Consensus 13 ~s~~g~~R~~NeD~~~~~~~~~~~~~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~n 92 (262)
T COG0631 13 LSDVGTVRKHNEDAFLIKPNENGNLLLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKEAILKAN 92 (262)
T ss_pred eccCCCccCCCCcceeeccccCCcceeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHH
Confidence 334444 889999999986444 4699999999999999999999999999876553221 3688999999999
Q ss_pred HHHHHHHHhhCCCCCCCccccceEEEEEEECCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHHHHHHH--
Q 016790 107 EEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEV-- 184 (382)
Q Consensus 107 ~~i~~~~~~~~~~~~~~~~~GtT~v~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri-- 184 (382)
+.+..... ......+||||++++++.++++|+|||||||+|+++++ .+++||.||++.+++++.++
T Consensus 93 ~~i~~~~~----~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~--------~~~~lT~DH~~~~~~~~~~~~~ 160 (262)
T COG0631 93 EAIAEEGQ----LNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDG--------ELKQLTEDHSLVNRLEQRGIIT 160 (262)
T ss_pred HHHHHhhh----cccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCC--------ceEEeccCCcHHHHHHHhcCCC
Confidence 99888643 33456789999999999999999999999999999999 89999999999999988764
Q ss_pred ---HHhCCCCCCeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeE
Q 016790 185 ---EALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLF 261 (382)
Q Consensus 185 ---~~~~p~~~~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~f 261 (382)
...||..+ ++|||||+... ..|++..+++.++| |
T Consensus 161 ~~~~~~~~~~~----------------~ltralG~~~~--------------------------~~p~~~~~~~~~~d-~ 197 (262)
T COG0631 161 PEEARSHPRRN----------------ALTRALGDFDL--------------------------LEPDITELELEPGD-F 197 (262)
T ss_pred HHHHHhCccch----------------hhhhhcCCCcc--------------------------cceeEEEEEcCCCC-E
Confidence 33444433 49999999765 68999999999996 7
Q ss_pred EEEecCccccCCCHHHHHHHHHc-CCcccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEEEeCCCC
Q 016790 262 LIFASDGLWEQLTDEAAVEIVCK-NPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQ 339 (382)
Q Consensus 262 LlLaSDGlwd~l~~~ei~~iv~~-~~~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi~l~~~~ 339 (382)
+|||||||||.++++++.++++. ...+.++.+|++.|+.. ++.||+|+++|.+....
T Consensus 198 llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~li~~a~~~---------------------g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 198 LLLCSDGLWDVVSDDEIVDILKNSETPQEAADKLIELALEG---------------------GGPDNITVVLVRLNGEG 255 (262)
T ss_pred EEEECCCCccCcCHHHHHHHHhcCCCHHHHHHHHHHHHHhc---------------------CCCCceEEEEEEeeccc
Confidence 77899999999999999999995 56778899999999883 36999999999998765
No 8
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=281.87 Aligned_cols=175 Identities=31% Similarity=0.450 Sum_probs=148.6
Q ss_pred ccccceEEEEEEECCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHHHHHHHHHhCCCCCCeEEeecCeee
Q 016790 124 ASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWR 203 (382)
Q Consensus 124 ~~~GtT~v~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~~~~~~g~~~ 203 (382)
..+|||++|+++.+++|+|||.||||+++.|++ +..-+|.||+|..+.|..||..++ |-+..- .|
T Consensus 328 ~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~G--------kAvdmS~DHKPEDevE~~RI~~AG----G~vtlD---GR 392 (542)
T KOG0699|consen 328 EDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNG--------KAVDMSVDHKPEDEVETNRIHAAG----GQVTLD---GR 392 (542)
T ss_pred CCCCceEEEEEecCceEEEecCCCcceEEecCC--------ceeecccCCCcccHHHHHHHHhcC----CeEeec---ce
Confidence 458999999999999999999999999999999 999999999999999999999985 333322 39
Q ss_pred ecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeEEEEecCccccCCCHHHHHHHHH
Q 016790 204 IKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVC 283 (382)
Q Consensus 204 ~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~fLlLaSDGlwd~l~~~ei~~iv~ 283 (382)
++|.|+++|||||..||+.. ..|+..++|++-|+|....|.+.|.|+||++||||++|+.++++++|+
T Consensus 393 VNGGLNLSRA~GDHaYK~N~------------~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr 460 (542)
T KOG0699|consen 393 VNGGLNLSRAFGDHAYKKNQ------------ELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVR 460 (542)
T ss_pred ecCccchhhhhhhhhhhccc------------CCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHH
Confidence 99999999999999998754 478889999999999999999999999999999999999999999998
Q ss_pred cCC-----cccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEEEeCCCCC
Q 016790 284 KNP-----RAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQK 340 (382)
Q Consensus 284 ~~~-----~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi~l~~~~~ 340 (382)
... ...++..|++..|.-.. .-++-.+||+|+|++.|++..+
T Consensus 461 ~~l~~n~~ls~iceeL~D~CLAp~T---------------~GDGTGCDNMT~ii~~Fkrk~~ 507 (542)
T KOG0699|consen 461 DLLAKNSSLSEICEELCDACLAPST---------------DGDGTGCDNMTVIITTFKRKSK 507 (542)
T ss_pred HHHhcCchHHHHHHHHHHhhcCCCC---------------CCCCcCCCcceEEEEEeccchh
Confidence 742 23456666666655321 1235569999999999986543
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1e-34 Score=270.65 Aligned_cols=239 Identities=37% Similarity=0.530 Sum_probs=193.2
Q ss_pred cceeeecc-CcccccceeeecCC---CceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhc----CCCcHHHHHHHHHHH
Q 016790 34 YSIAVVQA-NSCLEDQSQVFTSP---SATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEH----GGLSAEVIKKAFHAT 105 (382)
Q Consensus 34 ~~~~~~~~-r~~~eD~~~~~~~~---~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~----~~~~~~~l~~a~~~~ 105 (382)
++.+..++ |..|||++.+.... +..+|+|||||||+..++++++.+.+.+.+..... .......|+++|..+
T Consensus 3 ~~~~~~~g~r~~neD~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (254)
T cd00143 3 AGVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFLRA 82 (254)
T ss_pred eeeecCCCCCCCCcceEEEeccCCCCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Confidence 34455566 88899999998665 77999999999999999999999999998876543 234466788888888
Q ss_pred HHHHHHHHHhhCCCCCCCccccceEEEEEEECCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHHHHHHHH
Q 016790 106 EEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVE 185 (382)
Q Consensus 106 ~~~i~~~~~~~~~~~~~~~~~GtT~v~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~ 185 (382)
++.+....... .....+|||++++++.++.++++|+||||+|+++.+ .++++|.||++.++.+..++.
T Consensus 83 ~~~l~~~~~~~----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~--------~~~~lt~dh~~~~~~~~~~i~ 150 (254)
T cd00143 83 DEEILEEAQDE----PDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG--------EAVQLTKDHKPVNEEERERIE 150 (254)
T ss_pred HHHHHHhhhhc----cCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCC--------ceeEcCCCCCCcChHHHHHHH
Confidence 88887754321 334568999999999999999999999999999999 899999999999988888888
Q ss_pred HhCCCCCCeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEc-CCCCeEEEE
Q 016790 186 ALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKL-RPQDLFLIF 264 (382)
Q Consensus 186 ~~~p~~~~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l-~~~d~fLlL 264 (382)
..++.. . ..+.++...+||+||+..+| +.+.++|++..+.+ .++| +|||
T Consensus 151 ~~~~~~----~----~~~~~~~~~~t~~lG~~~~~---------------------~~~~~~~~~~~~~l~~~~d-~ill 200 (254)
T cd00143 151 KAGGRV----S----NGRVPGVLAVTRALGDFDLK---------------------PGVSAEPDVTVVKLTEDDD-FLIL 200 (254)
T ss_pred HcCCcE----E----eCEEcCceeeccccCCcccc---------------------CCEEcCCeEEEEEeCCCCc-EEEE
Confidence 765321 0 12445556799999997664 33668999999999 7777 6667
Q ss_pred ecCccccCCCHHHHHHHHHcCC----cccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEEEe
Q 016790 265 ASDGLWEQLTDEAAVEIVCKNP----RAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYL 335 (382)
Q Consensus 265 aSDGlwd~l~~~ei~~iv~~~~----~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi~l 335 (382)
||||||+++++++|..++.... .++++.+|++.|...+ +.||+|+||++|
T Consensus 201 ~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~a~~~~---------------------~~Dn~t~i~~~~ 254 (254)
T cd00143 201 ASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRG---------------------SHDNITVVVVRL 254 (254)
T ss_pred ECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHHHHhCC---------------------CCCCEEEEEEeC
Confidence 9999999999999999998754 5677888888887633 589999999975
No 10
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=7.9e-35 Score=300.53 Aligned_cols=235 Identities=22% Similarity=0.305 Sum_probs=170.2
Q ss_pred cceeeecc--CcccccceeeecC------C------CceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhc---CCCcHH
Q 016790 34 YSIAVVQA--NSCLEDQSQVFTS------P------SATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEH---GGLSAE 96 (382)
Q Consensus 34 ~~~~~~~~--r~~~eD~~~~~~~------~------~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~---~~~~~~ 96 (382)
+...+..| |+.|||+|.+... + ...+|+|||||||+.+++.|++.+++.|.++.... ....++
T Consensus 377 ~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~~~~ 456 (645)
T PRK14559 377 DAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELPDEE 456 (645)
T ss_pred EEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccccHHH
Confidence 33334444 8999999876531 1 34699999999999877777766666665544321 112367
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCCccccceEEEEEEECCEEEEEEcCCceeEEee-eecCCCCceEEEEeccCCCCC
Q 016790 97 VIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGR-RVSDDSKVKVAAERLSTDHNV 175 (382)
Q Consensus 97 ~l~~a~~~~~~~i~~~~~~~~~~~~~~~~~GtT~v~~~i~~~~l~vanvGDSRa~l~r-~~~~~~~~~~~~~~LT~dH~~ 175 (382)
.|+++|..+|+.+.+...+. ......+||||++++++.++.+|++||||||+|+++ ++ .+++||+||++
T Consensus 457 ~L~~ai~~AN~~I~~~~~~~--~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g--------~l~QLT~DHs~ 526 (645)
T PRK14559 457 TIREAIYLANEAIYDLNQQN--ARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKG--------GLEQLTVDHEV 526 (645)
T ss_pred HHHHHHHHHHHHHHHHhhhc--ccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCC--------eEEEeCCCCCH
Confidence 79999999999998754322 112345699999999999999999999999999985 45 89999999999
Q ss_pred CCHHHHHHH----HHhCCCCCCeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEE
Q 016790 176 GVEEVRKEV----EALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSIL 251 (382)
Q Consensus 176 ~~~~e~~ri----~~~~p~~~~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~ 251 (382)
.+++++.++ ...+| +...+|||||+...+ ..+|++.
T Consensus 527 ~~~lv~~Gi~~~~a~~~p----------------~~~~LTrALG~~~~~------------------------~l~Pdi~ 566 (645)
T PRK14559 527 GQREIQRGVEPQIAYARP----------------DAYQLTQALGPRDNS------------------------AIQPDIQ 566 (645)
T ss_pred HHHHHHhCCCHHHHhcCc----------------ccceeeeccCCCCCC------------------------cccceEE
Confidence 876554431 11222 223599999985432 1478999
Q ss_pred EEEcCCCCeEEEEecCccccC--CCH---HHHHHHHHcC-CcccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcC
Q 016790 252 IRKLRPQDLFLIFASDGLWEQ--LTD---EAAVEIVCKN-PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFH 325 (382)
Q Consensus 252 ~~~l~~~d~fLlLaSDGlwd~--l~~---~ei~~iv~~~-~~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (382)
.+.+.++| +||||||||||+ ++. +++..++... +...++.+|++.|+. +|++
T Consensus 567 ~~~L~~gD-~lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~---------------------~gg~ 624 (645)
T PRK14559 567 FLEIEEDT-LLLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQ---------------------YNGH 624 (645)
T ss_pred EEEcCCCC-EEEEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHH---------------------cCCC
Confidence 99999988 566699999994 554 3455666554 445678999999877 3468
Q ss_pred CCeEEEEEEeCCCCC
Q 016790 326 DDITVIVIYLDHHQK 340 (382)
Q Consensus 326 DNiTvivi~l~~~~~ 340 (382)
||||+|||+++..+.
T Consensus 625 DNITvIvV~l~~~p~ 639 (645)
T PRK14559 625 DNITAILVRLKVRPQ 639 (645)
T ss_pred CcEEEEEEEeccCCC
Confidence 999999999976543
No 11
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.8e-34 Score=269.73 Aligned_cols=235 Identities=40% Similarity=0.638 Sum_probs=191.2
Q ss_pred eeeecc-CcccccceeeecC--CCceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhcCC---CcHHHHHHHHHHHHHHH
Q 016790 36 IAVVQA-NSCLEDQSQVFTS--PSATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEHGG---LSAEVIKKAFHATEEEF 109 (382)
Q Consensus 36 ~~~~~~-r~~~eD~~~~~~~--~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~---~~~~~l~~a~~~~~~~i 109 (382)
.+..++ |..|||++++... .+..+|+|||||||..+|+++++.+.+.+.+....... .+...|++++..+++++
T Consensus 10 ~~~~~~~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 89 (255)
T smart00332 10 LSSMQGVRKPMEDAHVITPDLSDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKTDEEI 89 (255)
T ss_pred EecCCCCCCCCcceEEEeccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHH
Confidence 344555 9999999998876 77899999999999999999999999999876543332 36777899999999888
Q ss_pred HHHHHhhCCCCCCCccccceEEEEEEECCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHHHHHHHHHhCC
Q 016790 110 LRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHP 189 (382)
Q Consensus 110 ~~~~~~~~~~~~~~~~~GtT~v~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p 189 (382)
....... .....+|||++++++.++.+|++|+||||+|+++.+ .++++|+||++.++.+..++...+.
T Consensus 90 ~~~~~~~----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~--------~~~~lt~dh~~~~~~~~~~i~~~~~ 157 (255)
T smart00332 90 LEELESL----EEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNG--------KAVQLTEDHKPSNEDERARIEAAGG 157 (255)
T ss_pred HHhhhhc----cCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCC--------ceeEcCCCCCCcCHHHHHHHHHcCC
Confidence 8764422 133568999999999999999999999999999988 7899999999999999888887643
Q ss_pred CCCCeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEc-CCCCeEEEEecCc
Q 016790 190 DDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKL-RPQDLFLIFASDG 268 (382)
Q Consensus 190 ~~~~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l-~~~d~fLlLaSDG 268 (382)
.+.. ++.++...+||++|+..+| |.++..|++...++ .++| +|||||||
T Consensus 158 ----~~~~----~~~~~~~~lt~~~g~~~~~---------------------~~i~~~p~~~~~~~~~~~d-~ill~SDG 207 (255)
T smart00332 158 ----FVIN----GRVNGVLALSRAIGDFFLK---------------------PYVSAEPDVTVVELTEKDD-FLILASDG 207 (255)
T ss_pred ----EEEC----CeECCeEecccccCCHhhc---------------------CCeEeeeEEEEEEecCCCc-EEEEECCc
Confidence 1111 2555666799999987663 56889999999996 7777 67779999
Q ss_pred cccCCCHHHHHHHHHcCC----cccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEE
Q 016790 269 LWEQLTDEAAVEIVCKNP----RAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVI 333 (382)
Q Consensus 269 lwd~l~~~ei~~iv~~~~----~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi 333 (382)
||++++++++.+++.... ...++..|++.|... ++.||+|+|||
T Consensus 208 v~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~~---------------------~~~Dn~T~ivv 255 (255)
T smart00332 208 LWDVLSNQEVVDIVRKHLSKSDPEEAAKRLIDLALAR---------------------GSKDNITVIVV 255 (255)
T ss_pred cccCCCHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHc---------------------CCCCCeEEEEC
Confidence 999999999999998753 566778888877663 36899999985
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.94 E-value=3.6e-25 Score=205.26 Aligned_cols=249 Identities=29% Similarity=0.371 Sum_probs=172.7
Q ss_pred CCceEEEEEcCCChhHHHHHHHHHHHHHHHHHHh----h-----------------------------------cCCCcH
Q 016790 55 PSATYVGVYDGHGGPEASRFVNKHLFPYLHKFAM----E-----------------------------------HGGLSA 95 (382)
Q Consensus 55 ~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~----~-----------------------------------~~~~~~ 95 (382)
.++.+|.+||||.|..+|-.|++.+...+..... . .+....
T Consensus 142 ~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LVi 221 (493)
T KOG1323|consen 142 ADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVI 221 (493)
T ss_pred CcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhH
Confidence 4578999999999999998888888777654211 0 011124
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCccccceEEEEEEECCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCC
Q 016790 96 EVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNV 175 (382)
Q Consensus 96 ~~l~~a~~~~~~~i~~~~~~~~~~~~~~~~~GtT~v~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~ 175 (382)
.+|..||+..+++|.+... ......|||+++++.--++||++|.||||++++|++ .+..||++.++
T Consensus 222 GAlEsAFqemDeqiarer~------~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnd--------eirplS~efTP 287 (493)
T KOG1323|consen 222 GALESAFQEMDEQIARERQ------VWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRND--------EIRPLSKEFTP 287 (493)
T ss_pred HHHHHHHHHHHHHHHHHHH------hhcCCCCceEEEeeeeccceEEccCCCceEEEEecC--------CeeecccccCc
Confidence 5688899999988877532 122347999999999999999999999999999999 89999999988
Q ss_pred CCHHHHHHHHHhC---CCC--C-----------------CeEEeec-------------------------CeeeecCcc
Q 016790 176 GVEEVRKEVEALH---PDD--S-----------------HIVVYAR-------------------------GVWRIKGII 208 (382)
Q Consensus 176 ~~~~e~~ri~~~~---p~~--~-----------------~~~~~~~-------------------------g~~~~~g~l 208 (382)
.. ||+|++... |+- + .-+.++. ...|+-+.+
T Consensus 288 et--ERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~Ti 365 (493)
T KOG1323|consen 288 ET--ERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATI 365 (493)
T ss_pred HH--HHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhh
Confidence 64 555554432 210 0 0001100 012556678
Q ss_pred ccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCC----CCeEEEEecCccccCCCHHHHHHHHHc
Q 016790 209 QVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRP----QDLFLIFASDGLWEQLTDEAAVEIVCK 284 (382)
Q Consensus 209 ~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~----~d~fLlLaSDGlwd~l~~~ei~~iv~~ 284 (382)
.+||.|||..+|-... .-...|++++.|++..++|.. .|.++||+||||||+++++|+..+++.
T Consensus 366 gVsRGlGDH~Lkv~ds------------nl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs 433 (493)
T KOG1323|consen 366 GVSRGLGDHHLKVVDS------------NLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRS 433 (493)
T ss_pred eeccccCcceeeeecC------------CcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHH
Confidence 9999999999876542 223478999999999998874 244888899999999999999999998
Q ss_pred CCc---c-------cHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEEEeCCCC
Q 016790 285 NPR---A-------GIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQ 339 (382)
Q Consensus 285 ~~~---~-------~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi~l~~~~ 339 (382)
..+ + .+++.|+..|-... +...| .-+.-+-|+.|||||.||-|.+..
T Consensus 434 ~L~~~dp~Dp~RYt~aaqdlva~arg~~---k~rgW-----r~~n~~lgSgDDIsVfVIPL~~~~ 490 (493)
T KOG1323|consen 434 FLPSTDPADPSRYTQAAQDLVAAARGQQ---KDRGW-----RMNNGGLGSGDDISVFVIPLKYCA 490 (493)
T ss_pred hcCCCCCCChhHHHHHHHHHHHHhcCcc---CCCce-----eccCCCcCCCCceEEEEEeccCCC
Confidence 521 1 23444443332211 11111 111234668999999999998765
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.92 E-value=4.5e-24 Score=198.05 Aligned_cols=223 Identities=22% Similarity=0.204 Sum_probs=151.2
Q ss_pred cccccceeeecCCCceEEEEEcCCChhH-----HHHHHHHHHHHHHHHH--HhhcCCCcHHHHHHHHHHHHHHHHHHHHh
Q 016790 43 SCLEDQSQVFTSPSATYVGVYDGHGGPE-----ASRFVNKHLFPYLHKF--AMEHGGLSAEVIKKAFHATEEEFLRLVKR 115 (382)
Q Consensus 43 ~~~eD~~~~~~~~~~~l~gV~DG~GG~~-----aa~~a~~~l~~~l~~~--~~~~~~~~~~~l~~a~~~~~~~i~~~~~~ 115 (382)
+.-||+|++..++...+.|||||+|||+ .+.|..+.+...-+.. .......|...|.+++.++- +
T Consensus 89 ~~GEDa~Fvss~~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~----~---- 160 (330)
T KOG1379|consen 89 KGGEDAWFVSSNPHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELK----S---- 160 (330)
T ss_pred CCCCcceeeccCcccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHh----h----
Confidence 4679999999999999999999999997 6666655554433322 22233456666666654433 2
Q ss_pred hCCCCCCCccccceEEEEEEE--CCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCC--CCCHHHHHHHHHhCCCC
Q 016790 116 VLPVRPQIASVGSCCLVGAIS--NDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHN--VGVEEVRKEVEALHPDD 191 (382)
Q Consensus 116 ~~~~~~~~~~~GtT~v~~~i~--~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~--~~~~~e~~ri~~~~p~~ 191 (382)
.....-++||++++++. +++||+||+|||...++|++ ++..-|..+. ++.+. +....|.
T Consensus 161 ----~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G--------~vv~~S~~Q~H~FN~Py----QLs~~p~- 223 (330)
T KOG1379|consen 161 ----QKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREG--------KVVFRSPEQQHYFNTPY----QLSSPPE- 223 (330)
T ss_pred ----cCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECC--------EEEEcCchheeccCCce----eeccCCc-
Confidence 11112245666666666 89999999999999999999 7777665432 22111 0000000
Q ss_pred CCeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeEEEEecCcccc
Q 016790 192 SHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWE 271 (382)
Q Consensus 192 ~~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~fLlLaSDGlwd 271 (382)
+ ...+++|. + ...++..+.+++|| +||||||||||
T Consensus 224 --------~---------~~~~~~d~----p-----------------------~~ad~~~~~v~~GD-vIilATDGlfD 258 (330)
T KOG1379|consen 224 --------G---------YSSYISDV----P-----------------------DSADVTSFDVQKGD-VIILATDGLFD 258 (330)
T ss_pred --------c---------ccccccCC----c-----------------------cccceEEEeccCCC-EEEEecccccc
Confidence 0 11223331 1 24578899999999 66679999999
Q ss_pred CCCHHHHHHHHHcC------CcccHHHHHHHHHHHHHHHhchhhhhHHH--hhhcCCCCCcCCCeEEEEEEe
Q 016790 272 QLTDEAAVEIVCKN------PRAGIAKRLVRAALQEAARKREVGYKEIK--KLKRGIRRHFHDDITVIVIYL 335 (382)
Q Consensus 272 ~l~~~ei~~iv~~~------~~~~~a~~Lv~~Al~~~~~~~~~~~~~~~--~~~~~~~~~~~DNiTvivi~l 335 (382)
+|.+++|..++... ..+..|+++++.|...+-.+++.+.+... .......+|+.||||++|..+
T Consensus 259 Nl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 259 NLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred cccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 99999999999874 23567899999998888777666655543 333446777999999999763
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.81 E-value=4.6e-19 Score=161.64 Aligned_cols=185 Identities=19% Similarity=0.233 Sum_probs=104.1
Q ss_pred eeeccCcccccceeeecCCCceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhcCCCcHHH-HHHHHHHHHHHHHHHH--
Q 016790 37 AVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEHGGLSAEV-IKKAFHATEEEFLRLV-- 113 (382)
Q Consensus 37 ~~~~~r~~~eD~~~~~~~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~~~~~-l~~a~~~~~~~i~~~~-- 113 (382)
+..+.+.+|||++.+...+++.+++|+||+||...++.++..++..+.+............ ....+..+.+++....
T Consensus 4 sh~~~~~~nqD~~~~~~~~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (212)
T PF13672_consen 4 SHRGRGAPNQDAFGIRTDDDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEILSIVRA 83 (212)
T ss_dssp ---TTSSS--EEEEEE-TCCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cccCCCCCCCCCEEeeeCCCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHhhh
Confidence 3445689999999988888888889999999777666666666666665554443333322 3444444444444221
Q ss_pred -HhhCCCCCCCccccceEEEEEEECCEEEEEEcCCceeEEe-eeecCCCCceEEEEeccCCCCCCCHHHHHHHHHhCCCC
Q 016790 114 -KRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLG-RRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDD 191 (382)
Q Consensus 114 -~~~~~~~~~~~~~GtT~v~~~i~~~~l~vanvGDSRa~l~-r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~ 191 (382)
.............+||++++++.++.++++|+||||+|++ +++ .+..++.+|+.. .. .
T Consensus 84 ~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g--------~~~~l~~~~~~~-------~~-~---- 143 (212)
T PF13672_consen 84 FQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNG--------EIQQLTDDHSGE-------YP-N---- 143 (212)
T ss_dssp --HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETT--------EEEE-S---BHH-------HH-H----
T ss_pred hhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCC--------EEEEcCCCccch-------hh-h----
Confidence 0000012234567999999999999999999999999765 555 889999999611 10 0
Q ss_pred CCeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeEEEEecCcccc
Q 016790 192 SHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWE 271 (382)
Q Consensus 192 ~~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~fLlLaSDGlwd 271 (382)
.++.+..... ....++..+++.++|.||| ||||||+
T Consensus 144 ------------------~~~~~~~~~~-------------------------~~~~~~~~~~~~~~d~ilL-~SDG~~~ 179 (212)
T PF13672_consen 144 ------------------QTRSLTGDDP-------------------------EPDVQYGSIPLEEGDVILL-CSDGVWD 179 (212)
T ss_dssp ------------------CTTSCCHHCC-------------------------CTETEEEEEE--TT-EEEE-E-HHHHT
T ss_pred ------------------hhhccCcccc-------------------------ccCCeEEEEEcCCCCEEEE-ECcCccc
Confidence 1222322111 0233677788889996555 9999999
Q ss_pred CCCHHH-HHHHHHcC
Q 016790 272 QLTDEA-AVEIVCKN 285 (382)
Q Consensus 272 ~l~~~e-i~~iv~~~ 285 (382)
.+...+ +..++.+.
T Consensus 180 ~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 180 NLRSYEDLEQFLKDL 194 (212)
T ss_dssp TS-HHHHHHHH----
T ss_pred cCCCHHHHHHHhhhc
Confidence 998655 66666553
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.79 E-value=1.4e-18 Score=180.34 Aligned_cols=219 Identities=22% Similarity=0.307 Sum_probs=177.6
Q ss_pred cCCCceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccceEEE
Q 016790 53 TSPSATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEHGGLSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLV 132 (382)
Q Consensus 53 ~~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~~~GtT~v~ 132 (382)
.....+.||.+||-+-.....++...+..++....... .+..+.|+.+|.+.++++..... .-|..++.
T Consensus 547 ~~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~-~~et~~mr~~fl~~~rklg~~g~----------~lg~~~~~ 615 (1081)
T KOG0618|consen 547 FLNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLY-GNETEQMRNTFLRLNRKLGEEGQ----------VLGGSVVL 615 (1081)
T ss_pred ccCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhc-cChHHHHHHHHHHHhhhhhhhhc----------cccchhhh
Confidence 34556899999999999999999999999998866543 33466699999999999865432 12555555
Q ss_pred EEEEC--------CEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCC-CCCCHHHHHHHHHhCCCCCCeEEeecCeee
Q 016790 133 GAISN--------DVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDH-NVGVEEVRKEVEALHPDDSHIVVYARGVWR 203 (382)
Q Consensus 133 ~~i~~--------~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH-~~~~~~e~~ri~~~~p~~~~~~~~~~g~~~ 203 (382)
+.|.. ..+++||+|+|.+++++++ ...++|+-. -...++|.+||...+ +++.. ..+
T Consensus 616 ~~i~~d~~~~asS~~l~~Anvg~c~avls~ng--------~~~p~t~~~~~~v~~eE~~RI~~~~----g~i~e---d~k 680 (1081)
T KOG0618|consen 616 CQIVEDSLSPASSKTLFAANVGTCMAVLSRNG--------KPLPTTRSPMLEVDREEYKRIVDSK----GFITE---DNK 680 (1081)
T ss_pred eeecccccCcccchhhhHhhhccchhhhhhcC--------CcCcccccccccCCHHHHHHHHHhc----CeecC---CCe
Confidence 56643 3789999999999999999 566666554 334899999999885 44332 238
Q ss_pred ecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeEEEEecCccccCCCHHHHHHHHH
Q 016790 204 IKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVC 283 (382)
Q Consensus 204 ~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~fLlLaSDGlwd~l~~~ei~~iv~ 283 (382)
++|+...||++|.... .|.|.++|+|..+.|.+.|+|||+|+-+||++|+.+++++.++
T Consensus 681 ~ngvt~~tR~iG~~~l---------------------~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vR 739 (1081)
T KOG0618|consen 681 LNGVTSSTRAIGPFSL---------------------FPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVR 739 (1081)
T ss_pred eeceeeeeeecccccc---------------------cccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHh
Confidence 8888899999998765 5779999999999999999999999999999999999999999
Q ss_pred cC-CcccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEEEeCCCC
Q 016790 284 KN-PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQ 339 (382)
Q Consensus 284 ~~-~~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi~l~~~~ 339 (382)
.. ++--+|++|++.|..+++ .||++|+||++....
T Consensus 740 n~~dpL~AAkKL~d~AqSYgc---------------------~~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 740 NVEDPLLAAKKLCDLAQSYGC---------------------AENVSVLVVRLNHLE 775 (1081)
T ss_pred cCCchHHHHHHHHHHHHhccc---------------------ccCeeEEEEEeecch
Confidence 65 455689999999999774 899999999997654
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.71 E-value=8.7e-16 Score=137.92 Aligned_cols=166 Identities=18% Similarity=0.107 Sum_probs=121.2
Q ss_pred eeeeccCcccccceeeecCCC-ceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHH
Q 016790 36 IAVVQANSCLEDQSQVFTSPS-ATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEHGGLSAEVIKKAFHATEEEFLRLVK 114 (382)
Q Consensus 36 ~~~~~~r~~~eD~~~~~~~~~-~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~ 114 (382)
.-...+....-|.|.++..++ ..+++|+||||+...|.+++..+...+.+..... ..+.+.+..+++.+...
T Consensus 8 ~~~~p~~~~~GD~~~~~~~~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~-----~~~~~~l~~~n~~l~~~-- 80 (193)
T smart00331 8 QYYEDATQVGGDFYDVVKLPEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG-----ISLSQILERLNRAIYEN-- 80 (193)
T ss_pred EEEcchHhcCccEEEEEEeCCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC-----CCHHHHHHHHHHHHHhc--
Confidence 344455778889998886555 6899999999988889999999999988765432 23556677777776652
Q ss_pred hhCCCCCCCccccceEEEEEE--ECCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHHHHHHHHHhCCCCC
Q 016790 115 RVLPVRPQIASVGSCCLVGAI--SNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDS 192 (382)
Q Consensus 115 ~~~~~~~~~~~~GtT~v~~~i--~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~ 192 (382)
....+|+|++++++ .+++++++|+||+|+|+++.+. ...+.+.+
T Consensus 81 -------~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~-------~~~~~~~~-------------------- 126 (193)
T smart00331 81 -------GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADG-------GLVEDLDD-------------------- 126 (193)
T ss_pred -------CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCC-------CeEEEcCC--------------------
Confidence 12347999999988 5889999999999999999430 23333322
Q ss_pred CeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeEEEEecCccccC
Q 016790 193 HIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQ 272 (382)
Q Consensus 193 ~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~fLlLaSDGlwd~ 272 (382)
.++.+|.... ..++...+.+.++|.++ |+||||||.
T Consensus 127 -----------------~~~~lG~~~~--------------------------~~~~~~~~~l~~gd~l~-l~TDGl~e~ 162 (193)
T smart00331 127 -----------------LGAPLGLEPD--------------------------VEVDVRELTLEPGDLLL-LYTDGLTEA 162 (193)
T ss_pred -----------------CCceeeeCCC--------------------------CcceeEEEeeCCCCEEE-EECCCcccc
Confidence 2334553221 23567788999999555 599999999
Q ss_pred CCHHHHHHHHHcCC
Q 016790 273 LTDEAAVEIVCKNP 286 (382)
Q Consensus 273 l~~~ei~~iv~~~~ 286 (382)
++++++..++.+..
T Consensus 163 ~~~~~l~~~l~~~~ 176 (193)
T smart00331 163 RNPERLEELLEELL 176 (193)
T ss_pred CChHHHHHHHHHhc
Confidence 99999999998853
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.57 E-value=2.1e-13 Score=145.81 Aligned_cols=194 Identities=18% Similarity=0.160 Sum_probs=134.2
Q ss_pred eeeccCcccccceeeecCCCc-eEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHh
Q 016790 37 AVVQANSCLEDQSQVFTSPSA-TYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEHGGLSAEVIKKAFHATEEEFLRLVKR 115 (382)
Q Consensus 37 ~~~~~r~~~eD~~~~~~~~~~-~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~ 115 (382)
..+.++..+.|.|.+...+++ .+++|+||+|+...|..++..+.+.+.++.... .. ...++..+|+.+...
T Consensus 559 ~~k~g~~vsGD~y~~~~l~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g-~~----~~~ai~~lN~~L~~~--- 630 (764)
T TIGR02865 559 AAKDGELVSGDSYSFGKLSAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESG-FD----REVAIKTVNSILSLR--- 630 (764)
T ss_pred hcCCCCcccCceEEEEEECCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcC-CC----HHHHHHHHHHHHHhC---
Confidence 445558899999988865554 688999999966666677777777777654322 22 355667777665431
Q ss_pred hCCCCCCCccccceEEEEEEE--CCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHHHHHHHHHhCCCCCC
Q 016790 116 VLPVRPQIASVGSCCLVGAIS--NDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSH 193 (382)
Q Consensus 116 ~~~~~~~~~~~GtT~v~~~i~--~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~ 193 (382)
....+.+|+.+++++ .+.+.++|+|+++.|+.+++ .+.+++..+-|
T Consensus 631 ------~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~--------~v~~i~s~~lP------------------ 678 (764)
T TIGR02865 631 ------STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGA--------KVEVIRSSNLP------------------ 678 (764)
T ss_pred ------CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECC--------EEEEecCCCce------------------
Confidence 112368999998886 78999999999999999877 67766543221
Q ss_pred eEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeEEEEecCccccCC
Q 016790 194 IVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQL 273 (382)
Q Consensus 194 ~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~fLlLaSDGlwd~l 273 (382)
+|-... .+++....++.+|| +|+++|||+||..
T Consensus 679 --------------------lGil~~--------------------------~~~~~~~~~L~~GD-~Lll~SDGv~E~~ 711 (764)
T TIGR02865 679 --------------------IGILDE--------------------------VDVELVRKKLKNGD-LIVMVSDGVLEGE 711 (764)
T ss_pred --------------------eEeccC--------------------------CccceEEEEeCCCC-EEEEECCCCCcCC
Confidence 121000 24567788999999 5556999999988
Q ss_pred CHHH-----HHHHHHcC---CcccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEEEe
Q 016790 274 TDEA-----AVEIVCKN---PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYL 335 (382)
Q Consensus 274 ~~~e-----i~~iv~~~---~~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi~l 335 (382)
++.+ +.+++... ++++.+..+++.++.... +...||+|++++++
T Consensus 712 ~~~~~~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~------------------~~~~DD~Tvlvirv 763 (764)
T TIGR02865 712 KEVEGKVLWLVRKLKETNTNDPEEIAEYLLEKAKELRS------------------GKIKDDMTVIVAKV 763 (764)
T ss_pred cccccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcC------------------CCCCCCeEEEEEEe
Confidence 7533 66667643 445667777777765432 12479999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.37 E-value=7.5e-11 Score=105.57 Aligned_cols=180 Identities=22% Similarity=0.234 Sum_probs=110.2
Q ss_pred CCceEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccceEEEEE
Q 016790 55 PSATYVGVYDGHGGPEASRFVNKHLFPYLHKFAMEHGGLSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGA 134 (382)
Q Consensus 55 ~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~~~GtT~v~~~ 134 (382)
++..++.|+|+.|..-.|.+.+..+...++...... .. ..+.+..+++.+...... ....+|++++.
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~-~~----p~~~l~~ln~~l~~~~~~--------~~~~~t~~~~~ 68 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEG-LD----PEELLEALNRRLYRDLKG--------DNRYATACYAI 68 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTT-TS----HHHHHHHHHHHHHHHTTT--------TSTTEEEEEEE
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcC-CC----HHHHHHHHHHHHHHHhhh--------ccccceEEEEE
Confidence 456789999999966667777777777777765332 22 456677777777543221 13577888887
Q ss_pred EE--CCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHHHHHHHHHhCCCCCCeEEeecCeeeecCcccccc
Q 016790 135 IS--NDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSR 212 (382)
Q Consensus 135 i~--~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~~~~~~g~~~~~g~l~vtR 212 (382)
++ .+.++++|+|++++++++++. + ....+.....
T Consensus 69 ~d~~~~~l~~~~aG~~~~l~~~~~~--~----~~~~~~~~~~-------------------------------------- 104 (193)
T PF07228_consen 69 IDPETGTLTYANAGHPPPLLLRPGG--R----EIEQLESEGP-------------------------------------- 104 (193)
T ss_dssp EETTTTEEEEEEESSSEEEEEETTC--T----EEEEETCSSB--------------------------------------
T ss_pred ecccceEEEEeCCCCCCEEEEeccc--c----ceeecccCcc--------------------------------------
Confidence 75 678999999999999999851 1 3333322111
Q ss_pred ccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeEEEEecCccccCCCHH-------HHHHHHHcC
Q 016790 213 SIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDE-------AAVEIVCKN 285 (382)
Q Consensus 213 alGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~fLlLaSDGlwd~l~~~-------ei~~iv~~~ 285 (382)
.+|-..- ..+....+.+.+||. |+|+||||+|....+ .+.+++.+.
T Consensus 105 ~lG~~~~--------------------------~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~ 157 (193)
T PF07228_consen 105 PLGIFED--------------------------IDYQEQEIQLEPGDR-LLLYTDGLFEALNEDGEFFGEERLLELLDEN 157 (193)
T ss_dssp BCSSSCT--------------------------TCEEEEEEE--TTEE-EEEECHHHCTTTCHHCHHCCCHHHHHHHHCH
T ss_pred ceeeecc--------------------------ccccceEEEeccccE-EEEeCCChhhccCCccchhHHHHHHHHHhhc
Confidence 1332111 234566899999995 555999999998543 335566543
Q ss_pred ---CcccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEEEeC
Q 016790 286 ---PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLD 336 (382)
Q Consensus 286 ---~~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi~l~ 336 (382)
.....+..+++.+...+ .....||+|++++++.
T Consensus 158 ~~~~~~~~~~~l~~~~~~~~------------------~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 158 RGLSPQEIIDALLEAIDRFG------------------KGPLRDDITVLVIRRQ 193 (193)
T ss_dssp TTS-HHHHHHHHHHHHHHHT------------------TSSTSS-EEEEEEEE-
T ss_pred cCCCHHHHHHHHHHHHHHhc------------------CCCCCCceEEEEEEEC
Confidence 22333444444433311 1335899999999873
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.41 E-value=3.2e-05 Score=76.66 Aligned_cols=202 Identities=17% Similarity=0.157 Sum_probs=119.4
Q ss_pred cceeeeccCcccccceeeecCC-CceEEEEEcCCC-hhHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHH
Q 016790 34 YSIAVVQANSCLEDQSQVFTSP-SATYVGVYDGHG-GPEASRFVNKHLFPYLHKFAMEHGGLSAEVIKKAFHATEEEFLR 111 (382)
Q Consensus 34 ~~~~~~~~r~~~eD~~~~~~~~-~~~l~gV~DG~G-G~~aa~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~i~~ 111 (382)
........+..-=|.|-++... ....++|.|..| |-.+|-. .......++.......-.+ .+.+..+|+.+..
T Consensus 151 i~~~~~~a~~vGGD~yd~~~~~~~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p----~~~l~~~n~~~~~ 225 (367)
T COG2208 151 IEAILVPASEVGGDYYDFIQLGEKRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDP----ADVLETLNRVLKQ 225 (367)
T ss_pred ceeeEeEHHHcCCceEEEEEECCcEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCH----HHHHHHHHHHHHh
Confidence 3444444455777888777544 578999999999 5555444 4444444444332212223 3344455555444
Q ss_pred HHHhhCCCCCCCccccceEEEEEEE--CCEEEEEEcCCceeEEeeeecCCCCceEEEEeccCCCCCCCHHHHHHHHHhCC
Q 016790 112 LVKRVLPVRPQIASVGSCCLVGAIS--NDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHP 189 (382)
Q Consensus 112 ~~~~~~~~~~~~~~~GtT~v~~~i~--~~~l~vanvGDSRa~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p 189 (382)
... ..+-+|+.+++++ .+.+..+|+|=--+++.+.+... ....++
T Consensus 226 ~~~---------~~~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~-----~~~~l~------------------- 272 (367)
T COG2208 226 NLE---------EDMFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEI-----EVEDLT------------------- 272 (367)
T ss_pred ccc---------CCcEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCc-----eeEEcc-------------------
Confidence 211 1256788877775 78999999999998888877100 011111
Q ss_pred CCCCeEEeecCeeeecCccccccccccccccCCCCCCCccccccCCCCCCCCCCeeeeccEEEEEcCCCCeEEEEecCcc
Q 016790 190 DDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGL 269 (382)
Q Consensus 190 ~~~~~~~~~~g~~~~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~d~fLlLaSDGl 269 (382)
+....+|...- ..+.+....+.+|| +|+|.|||+
T Consensus 273 -------------------~~g~piG~~~~--------------------------~~~~~~~~~l~~gd-~lvl~tDGv 306 (367)
T COG2208 273 -------------------ALGLPIGLLPD--------------------------YQYEVASLQLEPGD-LLVLYTDGV 306 (367)
T ss_pred -------------------CCCceeeecCC--------------------------ccchheeEEecCCC-EEEEEcCCe
Confidence 13445554322 34567788999988 666699999
Q ss_pred cc-------CCCHHHHHHHHHcC---CcccHHHHHHHHHHHHHHHhchhhhhHHHhhhcCCCCCcCCCeEEEEEEeC
Q 016790 270 WE-------QLTDEAAVEIVCKN---PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLD 336 (382)
Q Consensus 270 wd-------~l~~~ei~~iv~~~---~~~~~a~~Lv~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvivi~l~ 336 (382)
.+ .+..+...+++.+. +.++.+..+.+......+. ....||+|++++++.
T Consensus 307 ~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~~~-----------------~~~~DDiTll~lk~~ 366 (367)
T COG2208 307 TEARNSDGEFFGLERLLKILGRLLGQPAEEILEAILESLEELQGD-----------------QIQDDDITLLVLKVK 366 (367)
T ss_pred eeeecCCccEecHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhCC-----------------ccccCceEEEEEEec
Confidence 98 55566777777742 2233333333333332221 123788999999975
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=75.18 E-value=62 Score=30.93 Aligned_cols=103 Identities=11% Similarity=-0.022 Sum_probs=57.2
Q ss_pred eccCcccccceeeec-CCCceEEEEEc--CCChhH--HHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHH
Q 016790 39 VQANSCLEDQSQVFT-SPSATYVGVYD--GHGGPE--ASRFVNKHLFPYLHKFAMEHGGLSAEVIKKAFHATEEEFLRLV 113 (382)
Q Consensus 39 ~~~r~~~eD~~~~~~-~~~~~l~gV~D--G~GG~~--aa~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~ 113 (382)
.......=|.|-++. +++...|-++| ||||+. +|-++...+...+......... ......+.+..+|+.+....
T Consensus 144 ~~~~~~~GD~~d~~~l~~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~-~~~~p~~~l~~lN~~l~~~~ 222 (303)
T PRK10693 144 LVAADKPGLVLDIAALSDNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQ-RLPELGALLKQVNHLLRQAN 222 (303)
T ss_pred ccCCCCCccEEeeeecCCCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhccccc-ccCCHHHHHHHHHHHHHhcC
Confidence 333555667776663 55555666666 677555 3333333344455443211111 00113455667777666521
Q ss_pred HhhCCCCCCCccccceEEEEEEE--CCEEEEEEcCCceeEE
Q 016790 114 KRVLPVRPQIASVGSCCLVGAIS--NDVLYVANLGDSRAVL 152 (382)
Q Consensus 114 ~~~~~~~~~~~~~GtT~v~~~i~--~~~l~vanvGDSRa~l 152 (382)
. . ...|+++++++ .+.|.++|.|-...++
T Consensus 223 -------~--~-~~~t~~~~~~d~~~~~l~~~~AGhp~~~~ 253 (303)
T PRK10693 223 -------L--P-GQFPLLVGYYHRELKNLILVSAGLNATLN 253 (303)
T ss_pred -------C--C-ceeeEEEEEEEcCCCeEEEEeCCCCCEEe
Confidence 0 1 12577777776 6689999999999775
No 21
>KOG3799 consensus Rab3 effector RIM1 and related proteins, contain Rab3a binding domain [Intracellular trafficking, secretion, and vesicular transport]
Probab=46.15 E-value=9.3 Score=31.96 Aligned_cols=25 Identities=36% Similarity=0.664 Sum_probs=19.0
Q ss_pred cchhhhccCC-CCCCCCceeeccCCC
Q 016790 4 LRSCYRCLGR-RGGGDGLMWHSDLKP 28 (382)
Q Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~~~~~ 28 (382)
+|+|+||+++ +.+....||.-.+=+
T Consensus 89 ~r~CARCGGrv~lrsNKv~wvcnlc~ 114 (169)
T KOG3799|consen 89 TRFCARCGGRVSLRSNKVMWVCNLCR 114 (169)
T ss_pred hhHHHhcCCeeeeccCceEEeccCCc
Confidence 6899999997 566678888765533
No 22
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=39.07 E-value=18 Score=27.00 Aligned_cols=28 Identities=25% Similarity=0.422 Sum_probs=17.5
Q ss_pred eeccEEEE-EcC-CCCeEEEEecCccccCCC
Q 016790 246 AEPSILIR-KLR-PQDLFLIFASDGLWEQLT 274 (382)
Q Consensus 246 ~~Pdi~~~-~l~-~~d~fLlLaSDGlwd~l~ 274 (382)
..|....+ .+. .|.+||+ ++||+|=.+.
T Consensus 13 ~vPr~g~l~~l~~~G~Rllv-a~nGv~lEv~ 42 (72)
T PF09436_consen 13 MVPRFGALEPLERPGHRLLV-ASNGVFLEVR 42 (72)
T ss_pred ecCCCCCCCccccCCcEEEE-ecCcEEEEEe
Confidence 34444433 234 6777777 9999996554
No 23
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=29.70 E-value=55 Score=25.86 Aligned_cols=34 Identities=24% Similarity=0.449 Sum_probs=27.0
Q ss_pred EEEcCCCCeEEEEecCccccCCCHHHHHHHHHcCC
Q 016790 252 IRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNP 286 (382)
Q Consensus 252 ~~~l~~~d~fLlLaSDGlwd~l~~~ei~~iv~~~~ 286 (382)
..-+.++|.+++ +.||++-.+...+..+-++..+
T Consensus 19 l~~l~~~D~vlL-~qdGV~aAl~~~~~~~sl~~~p 52 (96)
T COG2168 19 LRLLTEGDAVLL-LQDGVYAALKGNRYLASLRESP 52 (96)
T ss_pred HHHhcccCeEEE-EcccchhhhcCcHHHHHHhcCc
Confidence 344678896666 9999999999988888887764
No 24
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=27.96 E-value=1.2e+02 Score=17.72 Aligned_cols=20 Identities=30% Similarity=0.395 Sum_probs=16.2
Q ss_pred EEECCEEEEEEcCCceeEEe
Q 016790 134 AISNDVLYVANLGDSRAVLG 153 (382)
Q Consensus 134 ~i~~~~l~vanvGDSRa~l~ 153 (382)
+-.++.+||+-.|..|+..+
T Consensus 9 v~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EETTSEEEEEECCCTEEEEE
T ss_pred EeCCCCEEEEECCCCEEEEC
Confidence 34889999999999987653
No 25
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=23.21 E-value=43 Score=33.99 Aligned_cols=22 Identities=27% Similarity=0.587 Sum_probs=17.7
Q ss_pred cchhhhccCCCCCCCCceeecc
Q 016790 4 LRSCYRCLGRRGGGDGLMWHSD 25 (382)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~ 25 (382)
-|||++|...-+-.++--|-|-
T Consensus 349 AR~C~~C~~~H~AKdgdiw~Ek 370 (490)
T KOG0720|consen 349 ARWCAECGVKHPAKDGDIWAEK 370 (490)
T ss_pred hHHHHHhCccCccccCCEeeee
Confidence 4899999998888877777654
No 26
>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed
Probab=23.16 E-value=2.3e+02 Score=23.21 Aligned_cols=43 Identities=12% Similarity=0.187 Sum_probs=33.0
Q ss_pred CeeeeccEEEEEcCCCCeEEEEecCcccc-------CCCHHHHHHHHHcC
Q 016790 243 AMTAEPSILIRKLRPQDLFLIFASDGLWE-------QLTDEAAVEIVCKN 285 (382)
Q Consensus 243 ~v~~~Pdi~~~~l~~~d~fLlLaSDGlwd-------~l~~~ei~~iv~~~ 285 (382)
+|+..|++...+....+.|.|.+..-.-+ .+++++|.-+..+.
T Consensus 38 ~Vi~~P~V~~m~~~g~~tY~I~Ge~~~e~~~~~~~~~i~~edI~lv~~q~ 87 (115)
T PRK06369 38 IVFENPQVTVMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEEDIELVAEQT 87 (115)
T ss_pred EEEcCCeEEEEecCCCcEEEEEeccEEeeccccccCCCCHHHHHHHHHHH
Confidence 58899999999988888899988876654 46677776665553
Done!