Query 016792
Match_columns 382
No_of_seqs 262 out of 821
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 03:51:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016792.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016792hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ct2_A Tripartite motif protei 99.0 3.5E-10 1.2E-14 88.3 5.1 63 318-380 11-74 (88)
2 2kr4_A Ubiquitin conjugation f 99.0 2.7E-10 9.2E-15 89.1 3.9 53 320-378 12-64 (85)
3 1t1h_A Gspef-atpub14, armadill 98.9 4.5E-10 1.6E-14 85.8 4.1 54 320-378 6-59 (78)
4 2ysl_A Tripartite motif-contai 98.9 5E-10 1.7E-14 84.4 4.0 57 319-378 17-73 (73)
5 2c2l_A CHIP, carboxy terminus 98.9 3.5E-08 1.2E-12 92.7 17.3 53 321-378 207-259 (281)
6 2bay_A PRE-mRNA splicing facto 98.9 5E-10 1.7E-14 82.1 3.5 55 322-382 3-58 (61)
7 2yu4_A E3 SUMO-protein ligase 98.9 4.7E-10 1.6E-14 89.4 3.6 56 320-378 5-67 (94)
8 2kre_A Ubiquitin conjugation f 98.9 4.2E-10 1.4E-14 90.8 3.3 53 320-378 27-79 (100)
9 3ng2_A RNF4, snurf, ring finge 98.9 6.1E-10 2.1E-14 83.3 2.6 59 321-382 9-71 (71)
10 2xeu_A Ring finger protein 4; 98.9 5.6E-10 1.9E-14 81.7 2.3 58 322-382 3-64 (64)
11 1wgm_A Ubiquitin conjugation f 98.8 1.2E-09 3.9E-14 87.9 3.5 53 320-378 20-73 (98)
12 2f42_A STIP1 homology and U-bo 98.8 1.4E-09 4.8E-14 96.6 4.3 54 321-379 105-158 (179)
13 1g25_A CDK-activating kinase a 98.8 1.2E-09 4.2E-14 80.5 3.3 59 322-382 3-63 (65)
14 2ysj_A Tripartite motif-contai 98.8 3.3E-09 1.1E-13 77.6 4.4 47 319-368 17-63 (63)
15 2ecw_A Tripartite motif-contai 98.8 4.5E-09 1.5E-13 81.1 5.3 58 319-379 16-76 (85)
16 2egp_A Tripartite motif-contai 98.8 1.2E-09 4E-14 83.5 2.0 59 319-380 9-71 (79)
17 2ecv_A Tripartite motif-contai 98.8 3E-09 1E-13 82.1 4.3 59 319-380 16-77 (85)
18 2ecy_A TNF receptor-associated 98.8 3.3E-09 1.1E-13 78.5 4.3 53 320-377 13-65 (66)
19 3ztg_A E3 ubiquitin-protein li 98.8 4.3E-09 1.5E-13 82.9 5.0 50 319-372 10-60 (92)
20 1jm7_A BRCA1, breast cancer ty 98.8 3.4E-09 1.2E-13 86.4 4.1 57 320-379 19-75 (112)
21 3lrq_A E3 ubiquitin-protein li 98.7 6.7E-09 2.3E-13 83.5 4.3 59 318-381 18-77 (100)
22 3fl2_A E3 ubiquitin-protein li 98.7 9E-09 3.1E-13 85.8 4.2 51 319-374 49-99 (124)
23 2yur_A Retinoblastoma-binding 98.7 7.4E-09 2.5E-13 78.4 3.3 54 319-376 12-66 (74)
24 2djb_A Polycomb group ring fin 98.6 2E-08 6.7E-13 75.6 4.6 54 319-378 12-66 (72)
25 4ayc_A E3 ubiquitin-protein li 98.6 1.1E-08 3.6E-13 87.1 3.3 47 322-374 53-99 (138)
26 2ecj_A Tripartite motif-contai 98.6 1.8E-08 6E-13 72.2 3.8 47 319-368 12-58 (58)
27 2csy_A Zinc finger protein 183 98.6 2.3E-08 7.7E-13 77.0 3.7 47 321-373 14-60 (81)
28 2d8t_A Dactylidin, ring finger 98.6 1.2E-08 4.1E-13 76.5 2.0 53 321-379 14-66 (71)
29 1z6u_A NP95-like ring finger p 98.6 2.7E-08 9.2E-13 86.0 4.3 51 320-375 76-126 (150)
30 2y43_A E3 ubiquitin-protein li 98.6 3E-08 1E-12 79.2 3.9 54 319-378 19-73 (99)
31 2ecm_A Ring finger and CHY zin 98.5 3.2E-08 1.1E-12 70.0 3.1 49 322-373 5-54 (55)
32 3hct_A TNF receptor-associated 98.5 4.8E-08 1.6E-12 80.7 4.4 56 318-378 14-69 (118)
33 1rmd_A RAG1; V(D)J recombinati 98.5 4.6E-08 1.6E-12 80.4 4.2 56 319-379 20-75 (116)
34 2kiz_A E3 ubiquitin-protein li 98.5 5.8E-08 2E-12 72.2 4.2 52 321-375 13-64 (69)
35 3l11_A E3 ubiquitin-protein li 98.5 1.6E-08 5.6E-13 83.0 0.8 50 320-374 13-62 (115)
36 2ect_A Ring finger protein 126 98.5 3.6E-08 1.2E-12 75.1 2.6 57 319-378 12-68 (78)
37 2l0b_A E3 ubiquitin-protein li 98.5 6.9E-08 2.4E-12 76.1 3.7 52 320-374 38-89 (91)
38 1x4j_A Ring finger protein 38; 98.5 7.6E-08 2.6E-12 72.8 3.4 53 320-375 21-73 (75)
39 2ckl_B Ubiquitin ligase protei 98.5 7.8E-08 2.7E-12 84.1 3.9 52 318-374 50-102 (165)
40 3htk_C E3 SUMO-protein ligase 98.5 4.9E-08 1.7E-12 91.0 2.6 56 319-378 178-236 (267)
41 2ckl_A Polycomb group ring fin 98.4 9.4E-08 3.2E-12 77.6 3.7 51 319-375 12-63 (108)
42 1iym_A EL5; ring-H2 finger, ub 98.4 8.4E-08 2.9E-12 67.9 2.8 50 321-373 4-54 (55)
43 1e4u_A Transcriptional repress 98.4 1.9E-07 6.6E-12 71.6 4.0 56 320-378 9-66 (78)
44 1chc_A Equine herpes virus-1 r 98.4 1.4E-07 4.7E-12 69.8 2.8 47 322-373 5-51 (68)
45 1bor_A Transcription factor PM 98.4 4.4E-08 1.5E-12 70.1 -0.0 46 322-376 6-51 (56)
46 2ea6_A Ring finger protein 4; 98.4 1.5E-07 5.1E-12 69.5 2.7 51 320-373 13-67 (69)
47 1jm7_B BARD1, BRCA1-associated 98.3 6.2E-08 2.1E-12 79.9 0.4 52 319-378 19-71 (117)
48 4ap4_A E3 ubiquitin ligase RNF 98.3 1.4E-07 4.9E-12 78.5 2.4 59 321-382 6-68 (133)
49 2ep4_A Ring finger protein 24; 98.3 3.4E-07 1.2E-11 68.9 4.0 50 322-374 15-64 (74)
50 3knv_A TNF receptor-associated 98.3 1.3E-07 4.5E-12 80.8 1.2 52 318-374 27-78 (141)
51 4ic3_A E3 ubiquitin-protein li 98.3 1.9E-07 6.6E-12 70.7 1.9 52 319-382 21-73 (74)
52 2ecg_A Baculoviral IAP repeat- 98.3 3.5E-07 1.2E-11 69.3 3.0 52 319-382 22-74 (75)
53 3hcs_A TNF receptor-associated 98.3 4.4E-07 1.5E-11 79.6 3.8 56 318-378 14-69 (170)
54 2ecn_A Ring finger protein 141 98.2 1.8E-07 6E-12 69.7 0.1 53 319-378 12-64 (70)
55 4ap4_A E3 ubiquitin ligase RNF 98.2 5.1E-07 1.7E-11 75.2 2.5 60 320-382 70-133 (133)
56 1v87_A Deltex protein 2; ring- 98.1 1.5E-06 5.2E-11 70.9 4.2 54 322-375 25-95 (114)
57 2vje_A E3 ubiquitin-protein li 98.1 1.2E-06 4.2E-11 64.4 2.9 53 322-382 8-63 (64)
58 2y1n_A E3 ubiquitin-protein li 98.1 1.2E-06 4.2E-11 86.3 3.8 53 323-380 333-385 (389)
59 2vje_B MDM4 protein; proto-onc 98.1 1.2E-06 4E-11 64.2 2.5 53 322-382 7-62 (63)
60 2ecl_A Ring-box protein 2; RNF 98.0 1.6E-06 5.6E-11 66.7 2.3 50 325-377 29-79 (81)
61 1wim_A KIAA0161 protein; ring 98.0 2.1E-06 7.1E-11 67.8 1.7 58 322-379 5-71 (94)
62 2yho_A E3 ubiquitin-protein li 97.9 2.4E-06 8.2E-11 65.5 1.5 50 320-381 16-66 (79)
63 3dpl_R Ring-box protein 1; ubi 97.9 9.4E-06 3.2E-10 65.8 3.9 51 324-377 39-104 (106)
64 2ea5_A Cell growth regulator w 97.7 1.4E-05 4.7E-10 59.5 2.4 43 322-374 15-58 (68)
65 2d8s_A Cellular modulator of i 97.6 2.6E-05 8.9E-10 59.9 3.1 53 322-376 15-72 (80)
66 3t6p_A Baculoviral IAP repeat- 97.6 7.7E-06 2.6E-10 79.8 -0.1 52 319-382 292-344 (345)
67 4a0k_B E3 ubiquitin-protein li 97.5 1.7E-05 5.7E-10 65.5 0.0 50 324-376 50-114 (117)
68 3m62_A Ubiquitin conjugation f 96.4 0.0017 6E-08 70.3 4.2 52 321-378 890-942 (968)
69 3vk6_A E3 ubiquitin-protein li 96.2 0.0031 1.1E-07 49.9 3.2 47 324-374 3-49 (101)
70 1vyx_A ORF K3, K3RING; zinc-bi 95.6 0.0077 2.6E-07 43.3 3.2 49 322-374 6-59 (60)
71 3i2d_A E3 SUMO-protein ligase 94.7 0.023 7.8E-07 55.3 4.2 53 322-378 249-304 (371)
72 4fo9_A E3 SUMO-protein ligase 94.0 0.038 1.3E-06 53.6 4.2 53 322-378 215-270 (360)
73 2ct0_A Non-SMC element 1 homol 94.0 0.035 1.2E-06 41.6 3.1 51 322-375 15-65 (74)
74 4ayb_P DNA-directed RNA polyme 93.0 0.0037 1.3E-07 42.2 -3.3 29 339-372 5-33 (48)
75 1uuj_A Platelet-activating fac 92.3 0.26 9E-06 38.0 5.7 32 107-138 10-41 (88)
76 3k1l_B Fancl; UBC, ring, RWD, 92.0 0.049 1.7E-06 52.6 1.6 54 322-375 308-374 (381)
77 2k5c_A Uncharacterized protein 91.2 0.049 1.7E-06 41.1 0.6 55 317-373 3-62 (95)
78 2nxp_A Transcription initiatio 85.3 1.5 5.1E-05 37.3 6.1 65 165-229 34-98 (156)
79 2xtc_A F-box-like/WD repeat-co 83.9 1.4 4.8E-05 34.1 4.7 34 105-138 3-36 (90)
80 2ca5_A MXIH; transport protein 83.6 5.3 0.00018 30.2 7.6 53 10-71 12-64 (85)
81 3nw0_A Non-structural maintena 81.5 1.2 4E-05 40.7 4.1 50 322-375 180-230 (238)
82 1weo_A Cellulose synthase, cat 78.4 2.3 8E-05 32.6 4.1 50 322-373 16-69 (93)
83 2j49_A Transcription initiatio 78.0 1.3 4.5E-05 37.4 3.0 63 165-228 17-79 (148)
84 2j4b_A TAF5, transcription ini 76.7 3.4 0.00012 34.4 5.2 64 164-228 14-77 (138)
85 2jun_A Midline-1; B-BOX, TRIM, 76.0 1.2 4.2E-05 34.4 2.1 31 323-355 4-36 (101)
86 2lv2_A Insulinoma-associated p 73.8 2.2 7.6E-05 32.2 3.0 41 322-376 28-70 (85)
87 2gmg_A Hypothetical protein PF 72.6 1.2 4.2E-05 35.3 1.3 28 337-372 67-94 (105)
88 2jr6_A UPF0434 protein NMA0874 71.2 0.86 3E-05 33.4 0.1 37 319-377 5-41 (68)
89 1vd4_A Transcription initiatio 70.4 1.7 5.9E-05 30.1 1.5 16 361-376 38-53 (62)
90 2jvx_A NF-kappa-B essential mo 69.1 1.6 5.6E-05 26.2 1.0 14 321-334 2-15 (28)
91 2hf1_A Tetraacyldisaccharide-1 68.9 0.91 3.1E-05 33.2 -0.2 37 319-377 5-41 (68)
92 2kmk_A Zinc finger protein GFI 68.6 3.4 0.00012 29.4 2.9 17 360-376 55-71 (82)
93 1gh9_A 8.3 kDa protein (gene M 68.0 1.1 3.8E-05 33.1 0.1 19 361-380 20-38 (71)
94 2wbs_A Krueppel-like factor 4; 67.9 4.3 0.00015 29.5 3.4 34 343-376 43-79 (89)
95 2js4_A UPF0434 protein BB2007; 67.8 1 3.4E-05 33.2 -0.2 37 319-377 5-41 (70)
96 3uk3_C Zinc finger protein 217 67.7 5.1 0.00017 26.4 3.5 17 360-376 30-46 (57)
97 2jny_A Uncharacterized BCR; st 67.7 1.1 3.8E-05 32.7 0.0 38 318-377 6-43 (67)
98 2pk7_A Uncharacterized protein 66.4 1.4 4.8E-05 32.3 0.3 37 319-377 5-41 (69)
99 3sjb_C Golgi to ER traffic pro 65.7 32 0.0011 26.5 7.9 50 13-63 11-60 (93)
100 2drp_A Protein (tramtrack DNA- 65.6 5 0.00017 27.4 3.2 16 361-376 39-54 (66)
101 2kpi_A Uncharacterized protein 65.0 1.4 4.8E-05 30.9 0.1 15 318-332 6-20 (56)
102 1yuz_A Nigerythrin; rubrythrin 64.5 2.4 8.2E-05 37.6 1.6 16 322-338 171-186 (202)
103 4gzn_C ZFP-57, zinc finger pro 64.4 5.6 0.00019 27.7 3.3 17 360-376 30-46 (60)
104 2ebt_A Krueppel-like factor 5; 62.9 8 0.00027 28.6 4.2 35 342-376 52-89 (100)
105 2adr_A ADR1; transcription reg 62.4 7.2 0.00025 26.0 3.5 16 361-376 29-44 (60)
106 2dlq_A GLI-kruppel family memb 62.1 8.3 0.00028 29.7 4.3 54 322-375 35-107 (124)
107 2yt9_A Zinc finger-containing 61.8 6.4 0.00022 28.9 3.4 16 361-376 64-79 (95)
108 1bbo_A Human enhancer-binding 61.8 7.6 0.00026 25.5 3.5 16 361-376 28-43 (57)
109 2ee8_A Protein ODD-skipped-rel 61.6 11 0.00038 28.2 4.9 54 322-375 17-86 (106)
110 3mjh_B Early endosome antigen 61.5 2.4 8.1E-05 26.7 0.7 12 323-334 6-17 (34)
111 2dmd_A Zinc finger protein 64, 61.5 5.2 0.00018 29.5 2.8 36 341-376 40-78 (96)
112 2lni_A Stress-induced-phosphop 61.5 46 0.0016 24.6 9.0 94 110-212 18-111 (133)
113 1x6e_A Zinc finger protein 24; 60.6 7.5 0.00026 27.2 3.4 16 361-376 41-56 (72)
114 2lt7_A Transcriptional regulat 58.9 4.9 0.00017 32.7 2.4 12 362-373 78-89 (133)
115 1ubd_C Protein (YY1 zinc finge 58.8 9.9 0.00034 29.4 4.2 56 322-377 34-109 (124)
116 2zqm_A Prefoldin beta subunit 57.8 65 0.0022 25.0 9.5 68 26-93 30-112 (117)
117 2xjy_A Rhombotin-2; oncoprotei 57.7 7.6 0.00026 31.2 3.4 54 318-374 24-78 (131)
118 2jp9_A Wilms tumor 1; DNA bind 56.7 9.2 0.00031 29.3 3.6 54 322-375 36-109 (119)
119 2kck_A TPR repeat; tetratricop 56.6 50 0.0017 23.4 8.1 94 113-213 11-105 (112)
120 2bez_C E2 glycoprotein; coiled 56.1 58 0.002 24.0 7.8 59 23-84 16-74 (77)
121 2lce_A B-cell lymphoma 6 prote 56.0 10 0.00035 26.5 3.5 41 322-376 17-59 (74)
122 1p7a_A BF3, BKLF, kruppel-like 55.4 5.5 0.00019 23.6 1.7 16 361-376 10-25 (37)
123 1ard_A Yeast transcription fac 54.2 5.5 0.00019 21.8 1.4 15 362-376 2-16 (29)
124 1a1h_A QGSR zinc finger peptid 53.6 8.7 0.0003 27.8 2.9 17 360-376 60-76 (90)
125 2k5c_A Uncharacterized protein 53.6 3.7 0.00013 31.0 0.7 19 322-340 51-69 (95)
126 1a17_A Serine/threonine protei 53.5 75 0.0026 24.5 9.2 94 110-210 49-142 (166)
127 2jrr_A Uncharacterized protein 52.5 3.3 0.00011 30.2 0.3 19 361-379 39-57 (67)
128 2d68_A FOP, FGFR1OP; alpha hel 52.4 23 0.0008 26.6 5.0 37 108-145 19-55 (82)
129 1m3v_A FLIN4, fusion of the LI 51.8 8.3 0.00028 30.8 2.6 57 318-377 27-84 (122)
130 3k4t_A Virion-associated prote 51.7 77 0.0026 24.2 7.7 67 1-81 2-70 (95)
131 2gvi_A Conserved hypothetical 51.6 4 0.00014 36.2 0.7 43 310-354 160-202 (204)
132 2m0e_A Zinc finger and BTB dom 51.4 7.1 0.00024 21.1 1.6 15 362-376 2-16 (29)
133 3u4t_A TPR repeat-containing p 51.2 40 0.0014 28.9 7.4 94 113-213 42-136 (272)
134 2efk_A CDC42-interacting prote 51.0 1.4E+02 0.0048 26.9 13.3 94 5-100 102-211 (301)
135 2m0f_A Zinc finger and BTB dom 51.0 4.7 0.00016 22.0 0.8 14 362-375 2-15 (29)
136 2kvh_A Zinc finger and BTB dom 50.7 4.8 0.00016 21.9 0.7 15 362-376 3-17 (27)
137 2xb1_A Pygopus homolog 2, B-ce 50.5 6 0.00021 31.2 1.6 53 321-374 2-64 (105)
138 2vgx_A Chaperone SYCD; alterna 50.4 92 0.0032 24.6 9.4 91 113-212 26-116 (148)
139 2dna_A Unnamed protein product 49.2 7.2 0.00025 28.3 1.6 24 151-174 35-60 (67)
140 1elr_A TPR2A-domain of HOP; HO 49.0 74 0.0025 23.1 10.5 99 111-213 7-107 (131)
141 2ho1_A Type 4 fimbrial biogene 48.6 1.2E+02 0.0041 25.4 10.4 95 110-211 73-167 (252)
142 2g0u_A Type III secretion syst 48.6 56 0.0019 25.1 6.7 53 10-71 18-70 (92)
143 1znf_A 31ST zinc finger from X 48.4 6.7 0.00023 21.1 1.2 14 363-376 2-15 (27)
144 4gcn_A Protein STI-1; structur 48.1 90 0.0031 23.9 9.5 98 111-213 11-111 (127)
145 1paa_A Yeast transcription fac 48.0 7.7 0.00026 21.4 1.4 15 362-376 2-16 (30)
146 4i17_A Hypothetical protein; T 48.0 1.2E+02 0.0041 25.2 10.7 122 74-214 20-146 (228)
147 2jvm_A Uncharacterized protein 48.0 3.7 0.00013 30.9 -0.1 16 361-376 52-67 (80)
148 2els_A Zinc finger protein 406 47.9 5.5 0.00019 23.5 0.7 16 361-376 8-23 (36)
149 2cot_A Zinc finger protein 435 47.9 16 0.00053 25.8 3.4 16 361-376 45-60 (77)
150 2lvu_A Zinc finger and BTB dom 53.5 3.9 0.00013 22.1 0.0 15 362-376 2-16 (26)
151 2kvf_A Zinc finger and BTB dom 47.5 5.6 0.00019 21.7 0.7 14 362-375 3-16 (28)
152 1klr_A Zinc finger Y-chromosom 47.4 8.1 0.00028 21.1 1.4 15 362-376 2-16 (30)
153 2ct1_A Transcriptional repress 47.1 15 0.00051 25.9 3.2 16 361-376 44-59 (77)
154 1wyy_A E2 glycoprotein; membra 46.9 1.2E+02 0.0042 25.1 10.1 74 6-86 16-89 (149)
155 2jz8_A Uncharacterized protein 46.8 5.4 0.00019 30.4 0.7 18 361-378 47-64 (87)
156 1llm_C Chimera of ZIF23-GCN4; 46.2 16 0.00053 26.5 3.3 15 361-375 30-44 (88)
157 2elt_A Zinc finger protein 406 44.9 7.5 0.00026 22.7 1.0 16 361-376 8-23 (36)
158 2xev_A YBGF; tetratricopeptide 44.8 92 0.0031 23.0 9.7 96 114-214 8-105 (129)
159 2kvg_A Zinc finger and BTB dom 44.3 5 0.00017 22.0 0.1 15 362-376 3-17 (27)
160 1f2i_G Fusion of N-terminal 17 44.2 15 0.00053 25.4 2.8 17 360-376 47-63 (73)
161 2xcb_A PCRH, regulatory protei 43.9 1.1E+02 0.0037 23.6 9.0 91 113-212 23-113 (142)
162 2lvr_A Zinc finger and BTB dom 49.8 4.9 0.00017 22.2 0.0 15 362-376 3-17 (30)
163 2elp_A Zinc finger protein 406 43.7 6.8 0.00023 23.2 0.7 15 361-375 8-22 (37)
164 2elx_A Zinc finger protein 406 43.6 8 0.00027 22.3 1.0 16 361-376 6-21 (35)
165 3vlc_E Golgi to ER traffic pro 43.5 29 0.001 26.8 4.4 49 10-63 19-67 (94)
166 1rh1_A Colicin B; FEPA, cytoto 43.5 64 0.0022 32.0 7.7 56 112-170 390-448 (511)
167 3mkr_A Coatomer subunit epsilo 43.4 93 0.0032 27.9 8.8 89 110-211 67-156 (291)
168 1rik_A E6APC1 peptide; E6-bind 43.2 7.2 0.00025 21.3 0.7 15 362-376 2-16 (29)
169 3gwk_C SAG1039, putative uncha 43.1 99 0.0034 22.9 8.5 33 8-44 11-43 (98)
170 2elr_A Zinc finger protein 406 43.1 9.9 0.00034 22.1 1.4 15 361-375 8-22 (36)
171 2dlk_A Novel protein; ZF-C2H2 43.0 25 0.00087 24.5 3.9 12 361-372 67-78 (79)
172 2jy5_A Ubiquilin-1; UBA, alter 42.8 50 0.0017 22.3 5.1 22 151-172 28-51 (52)
173 2elq_A Zinc finger protein 406 42.8 8.5 0.00029 22.5 1.0 15 361-375 8-22 (36)
174 2wbt_A B-129; zinc finger; 2.7 42.5 23 0.00079 27.6 4.0 16 361-376 99-114 (129)
175 2j9u_B VPS36, vacuolar protein 42.0 12 0.00042 27.7 1.9 36 319-354 14-57 (76)
176 6rxn_A Rubredoxin; electron tr 41.9 8.8 0.0003 25.7 1.0 10 362-371 30-39 (46)
177 2knz_A Ubiquilin-4; cytoplasm, 41.5 11 0.00038 25.8 1.6 22 151-172 27-50 (53)
178 2m0d_A Zinc finger and BTB dom 41.0 8.3 0.00028 21.0 0.7 14 362-375 3-16 (30)
179 2ctu_A Zinc finger protein 483 40.7 5.4 0.00019 27.6 -0.1 13 322-334 18-30 (73)
180 1rim_A E6APC2 peptide; E6-bind 40.6 12 0.0004 21.7 1.4 15 362-376 2-16 (33)
181 1ywm_A C protein alpha-antigen 40.5 1.1E+02 0.0038 26.1 7.8 57 2-64 122-178 (200)
182 3q49_B STIP1 homology and U bo 40.3 1.1E+02 0.0038 22.7 8.5 95 109-212 10-104 (137)
183 2vq2_A PILW, putative fimbrial 39.7 1.5E+02 0.0051 23.9 9.7 20 113-132 47-66 (225)
184 2elo_A Zinc finger protein 406 39.3 9.1 0.00031 22.5 0.8 16 361-376 8-23 (37)
185 2lvt_A Zinc finger and BTB dom 45.4 6.3 0.00022 21.7 0.0 15 362-376 2-16 (29)
186 2cp9_A EF-TS, EF-TSMT, elongat 39.0 26 0.00088 25.1 3.2 23 151-173 25-49 (64)
187 3zqe_A Protein PRGI, cell inva 38.9 95 0.0032 29.1 7.9 55 10-73 12-66 (305)
188 1srk_A Zinc finger protein ZFP 38.7 10 0.00035 21.9 1.0 16 361-376 6-21 (35)
189 3d00_A Tungsten formylmethanof 38.5 7.8 0.00027 34.0 0.5 31 313-352 155-185 (191)
190 2ytb_A Zinc finger protein 32; 38.3 15 0.0005 22.2 1.7 16 361-376 10-25 (42)
191 2i13_A AART; DNA binding, zinc 38.3 18 0.00061 30.4 2.8 36 341-376 137-175 (190)
192 2xqn_T Testin, TESS; metal-bin 38.0 19 0.00065 28.6 2.7 51 318-375 25-76 (126)
193 1lko_A Rubrerythrin all-iron(I 37.9 6.4 0.00022 34.4 -0.2 26 110-135 26-51 (191)
194 2i13_A AART; DNA binding, zinc 37.9 19 0.00064 30.3 2.9 54 322-375 77-146 (190)
195 1xou_B Z5138 gene product; coi 37.7 1.2E+02 0.0041 22.3 7.5 63 24-91 20-85 (95)
196 2yte_A Zinc finger protein 473 37.5 15 0.00052 22.2 1.7 16 361-376 9-24 (42)
197 2enf_A Zinc finger protein 347 37.5 15 0.00052 22.8 1.7 16 361-376 11-26 (46)
198 1wr1_B Ubiquitin-like protein 37.0 14 0.00049 25.9 1.6 22 151-172 33-56 (58)
199 2bwb_A Ubiquitin-like protein 37.0 14 0.00048 24.5 1.5 21 151-171 23-45 (46)
200 2dah_A Ubiquilin-3; UBA domain 36.9 14 0.00046 25.5 1.4 22 152-173 26-49 (54)
201 3ulq_A Response regulator aspa 36.6 2.4E+02 0.0084 25.6 17.2 101 110-213 105-212 (383)
202 2yti_A Zinc finger protein 347 36.5 16 0.00055 22.7 1.7 16 361-376 11-26 (46)
203 2fiy_A Protein FDHE homolog; F 36.5 2.4 8.2E-05 40.2 -3.4 11 361-371 221-231 (309)
204 1wgn_A UBAP1, ubiquitin associ 36.3 29 0.00099 24.7 3.0 23 151-173 34-58 (63)
205 1pft_A TFIIB, PFTFIIBN; N-term 36.3 11 0.00038 25.2 0.9 10 321-330 4-13 (50)
206 2elv_A Zinc finger protein 406 36.2 11 0.00036 22.1 0.7 16 361-376 8-23 (36)
207 2kfq_A FP1; protein, de novo p 35.8 8.5 0.00029 22.1 0.2 15 362-376 2-16 (32)
208 2eps_A POZ-, at HOOK-, and zin 35.5 29 0.00098 22.6 3.0 14 361-374 40-53 (54)
209 2k5r_A Uncharacterized protein 35.5 15 0.00053 28.6 1.7 16 362-377 53-68 (97)
210 2cos_A Serine/threonine protei 35.4 28 0.00094 24.1 2.7 21 152-172 25-48 (54)
211 1wjp_A Zinc finger protein 295 35.4 18 0.00061 27.3 2.1 15 361-375 68-82 (107)
212 2elm_A Zinc finger protein 406 35.3 8.7 0.0003 22.9 0.2 15 361-375 8-22 (37)
213 3ro3_A PINS homolog, G-protein 35.2 1.4E+02 0.0048 22.3 10.7 105 109-213 10-117 (164)
214 2en7_A Zinc finger protein 268 34.9 15 0.00053 22.4 1.4 16 361-376 11-26 (44)
215 2eq1_A Zinc finger protein 347 34.6 16 0.00055 22.7 1.4 16 361-376 11-26 (46)
216 4dyl_A Tyrosine-protein kinase 34.5 2.4E+02 0.0084 27.0 10.7 93 6-100 106-210 (406)
217 1deq_A Fibrinogen (alpha chain 34.3 2.2E+02 0.0075 27.4 9.8 25 143-167 177-201 (390)
218 2rpc_A Zinc finger protein ZIC 34.2 38 0.0013 27.1 4.1 54 323-376 63-136 (155)
219 2ely_A Zinc finger protein 224 34.2 20 0.0007 22.2 1.9 16 361-376 11-26 (46)
220 2el5_A Zinc finger protein 268 34.0 13 0.00046 22.5 1.0 16 361-376 9-24 (42)
221 2ep1_A Zinc finger protein 484 34.0 18 0.00062 22.4 1.7 16 361-376 11-26 (46)
222 2cup_A Skeletal muscle LIM-pro 34.0 13 0.00044 28.3 1.0 51 318-375 28-79 (101)
223 3ulq_A Response regulator aspa 33.8 2.7E+02 0.0093 25.2 13.0 101 110-213 186-292 (383)
224 2emg_A Zinc finger protein 484 33.8 17 0.00057 22.6 1.5 16 361-376 11-26 (46)
225 2eoh_A Zinc finger protein 28 33.6 17 0.00057 22.7 1.4 16 361-376 11-26 (46)
226 2enh_A Zinc finger protein 28 33.5 17 0.00056 22.7 1.4 16 361-376 11-26 (46)
227 2en2_A B-cell lymphoma 6 prote 33.4 14 0.00047 22.4 0.9 16 361-376 10-25 (42)
228 2em6_A Zinc finger protein 224 33.4 19 0.00066 22.3 1.7 16 361-376 11-26 (46)
229 2emz_A ZFP-95, zinc finger pro 33.3 19 0.00067 22.3 1.7 16 361-376 11-26 (46)
230 2yu5_A Zinc finger protein 473 33.3 14 0.00049 22.7 1.0 16 361-376 11-26 (44)
231 4ioe_A Secreted protein ESXB; 33.3 1.1E+02 0.0039 22.2 6.5 33 8-44 12-44 (93)
232 2ept_A Zinc finger protein 32; 33.2 14 0.00049 22.3 1.0 16 361-376 9-24 (41)
233 1x6h_A Transcriptional repress 33.1 34 0.0012 24.1 3.3 11 322-332 15-25 (86)
234 4a18_Q RPL36, 60S ribosomal pr 33.1 72 0.0025 25.0 5.1 43 187-229 53-100 (104)
235 4a1s_A PINS, partner of inscut 33.0 1.6E+02 0.0055 26.8 8.9 96 113-210 53-151 (411)
236 2ekk_A UBA domain from E3 ubiq 33.0 39 0.0013 22.1 3.2 22 151-172 24-46 (47)
237 2eq2_A Zinc finger protein 347 32.9 17 0.00059 22.5 1.4 16 361-376 11-26 (46)
238 2akf_A Coronin-1A; coiled coil 32.8 39 0.0013 20.2 2.7 23 69-91 3-25 (32)
239 2en9_A Zinc finger protein 28 32.6 18 0.00061 22.5 1.4 16 361-376 11-26 (46)
240 2eon_A ZFP-95, zinc finger pro 32.6 18 0.00061 22.6 1.4 16 361-376 11-26 (46)
241 2eop_A Zinc finger protein 268 32.5 21 0.00071 22.1 1.8 16 361-376 11-26 (46)
242 2eof_A Zinc finger protein 268 32.5 15 0.00052 22.4 1.1 16 361-376 11-26 (44)
243 2eov_A Zinc finger protein 484 32.4 20 0.00069 22.1 1.7 16 361-376 11-26 (46)
244 3hym_B Cell division cycle pro 32.4 2.4E+02 0.0083 24.2 11.5 96 113-212 164-263 (330)
245 3q15_A PSP28, response regulat 32.2 1.4E+02 0.0049 27.2 8.4 104 105-210 7-126 (378)
246 1vej_A Riken cDNA 4931431F19; 32.2 18 0.00063 26.6 1.6 22 151-172 45-68 (74)
247 2eos_A B-cell lymphoma 6 prote 32.2 19 0.00063 21.9 1.4 16 361-376 10-25 (42)
248 2g3q_A Protein YBL047C; endocy 32.1 42 0.0014 21.5 3.2 21 152-172 20-42 (43)
249 4gco_A Protein STI-1; structur 32.1 1.7E+02 0.0057 22.3 9.6 93 111-212 16-108 (126)
250 2eom_A ZFP-95, zinc finger pro 32.1 18 0.00061 22.6 1.4 16 361-376 11-26 (46)
251 1vyh_C Platelet-activating fac 32.0 9.7 0.00033 36.3 0.0 33 106-138 7-39 (410)
252 2epx_A Zinc finger protein 28 31.8 21 0.00073 22.1 1.7 16 361-376 11-26 (47)
253 3f6n_A Virion-associated prote 31.8 2E+02 0.0068 23.1 8.0 19 1-19 2-20 (129)
254 1njq_A Superman protein; zinc- 31.7 15 0.00053 21.9 0.9 16 361-376 5-20 (39)
255 2yth_A Zinc finger protein 224 31.7 18 0.00063 22.4 1.4 16 361-376 11-26 (46)
256 1hxi_A PEX5, peroxisome target 31.5 1.7E+02 0.0057 22.1 8.3 92 113-213 22-113 (121)
257 2eoq_A Zinc finger protein 224 31.4 19 0.00065 22.3 1.4 16 361-376 11-26 (46)
258 2e72_A POGO transposable eleme 31.4 16 0.00053 24.7 0.9 17 361-377 11-27 (49)
259 3sz7_A HSC70 cochaperone (SGT) 31.3 1.9E+02 0.0064 22.6 10.9 95 109-212 12-106 (164)
260 1wil_A KIAA1045 protein; ring 31.2 25 0.00087 26.6 2.2 48 322-370 15-75 (89)
261 2eoj_A Zinc finger protein 268 31.1 14 0.00049 22.6 0.7 16 361-376 11-26 (44)
262 2dkl_A Trinucleotide repeat co 31.1 37 0.0013 25.6 3.2 28 152-179 37-66 (85)
263 2em0_A Zinc finger protein 224 31.1 22 0.00076 22.0 1.7 16 361-376 11-26 (46)
264 2ytf_A Zinc finger protein 268 31.0 16 0.00056 22.6 1.0 16 361-376 11-26 (46)
265 2v3b_B Rubredoxin 2, rubredoxi 31.0 4.8 0.00016 28.0 -1.7 10 362-371 36-45 (55)
266 2emi_A Zinc finger protein 484 31.0 14 0.00049 23.0 0.7 16 361-376 11-26 (46)
267 3upv_A Heat shock protein STI1 30.8 1.6E+02 0.0055 21.7 9.8 93 112-213 8-100 (126)
268 2ytn_A Zinc finger protein 347 30.7 23 0.00077 21.9 1.7 16 361-376 11-26 (46)
269 2epv_A Zinc finger protein 268 30.7 15 0.0005 22.8 0.7 16 361-376 11-26 (44)
270 2eow_A Zinc finger protein 347 30.4 17 0.00058 22.5 1.0 16 361-376 11-26 (46)
271 2eou_A Zinc finger protein 473 30.4 21 0.00071 21.9 1.4 16 361-376 11-26 (44)
272 2l4z_A DNA endonuclease RBBP8, 30.4 26 0.00088 28.1 2.3 38 318-355 83-121 (123)
273 1x5w_A Zinc finger protein 64, 30.3 34 0.0012 23.4 2.8 16 361-376 36-51 (70)
274 2epc_A Zinc finger protein 32; 30.3 16 0.00056 22.0 0.9 16 361-376 10-25 (42)
275 2en3_A ZFP-95, zinc finger pro 30.3 17 0.00058 22.6 1.0 16 361-376 11-26 (46)
276 2vyi_A SGTA protein; chaperone 30.2 1.5E+02 0.0052 21.2 10.2 94 110-212 14-107 (131)
277 2ctd_A Zinc finger protein 512 30.2 35 0.0012 25.6 3.0 17 360-376 60-76 (96)
278 2v5f_A Prolyl 4-hydroxylase su 30.2 1.4E+02 0.0048 22.0 6.6 56 156-211 15-72 (104)
279 3gw4_A Uncharacterized protein 30.1 2.1E+02 0.0071 22.7 12.5 104 107-213 25-135 (203)
280 2yrj_A Zinc finger protein 473 30.1 17 0.00059 22.5 1.0 16 361-376 11-26 (46)
281 2ytp_A Zinc finger protein 484 30.0 17 0.00059 22.6 1.0 16 361-376 11-26 (46)
282 2epz_A Zinc finger protein 28 30.0 24 0.00083 21.8 1.8 16 361-376 11-26 (46)
283 2emb_A Zinc finger protein 473 30.0 17 0.00059 22.3 1.0 16 361-376 11-26 (44)
284 2avr_X Adhesion A; antiparalle 29.9 2.1E+02 0.0073 22.9 8.7 11 153-163 103-113 (119)
285 2rgt_A Fusion of LIM/homeobox 29.9 24 0.00082 29.7 2.2 43 317-359 87-130 (169)
286 2epa_A Krueppel-like factor 10 29.8 28 0.00094 23.9 2.2 17 360-376 45-63 (72)
287 2epq_A POZ-, at HOOK-, and zin 29.8 43 0.0015 20.5 3.0 10 360-369 36-45 (45)
288 2ytr_A Zinc finger protein 347 29.7 24 0.00081 21.8 1.7 16 361-376 11-26 (46)
289 2yts_A Zinc finger protein 484 29.7 15 0.00053 22.7 0.7 16 361-376 11-26 (46)
290 2elz_A Zinc finger protein 224 29.7 24 0.00081 21.9 1.7 16 361-376 11-26 (46)
291 2emk_A Zinc finger protein 28 29.7 21 0.00073 22.1 1.4 16 361-376 11-26 (46)
292 1z96_A DNA-damage, UBA-domain 29.5 45 0.0015 20.6 3.0 17 153-169 21-39 (40)
293 2xz2_A CSTF-50, isoform B; RNA 29.4 61 0.0021 23.3 3.8 33 106-138 15-47 (66)
294 2yrm_A B-cell lymphoma 6 prote 29.4 22 0.00075 21.8 1.4 16 361-376 9-24 (43)
295 2ytq_A Zinc finger protein 268 29.4 25 0.00085 21.8 1.7 16 361-376 11-26 (46)
296 2emj_A Zinc finger protein 28 29.3 18 0.00063 22.5 1.0 16 361-376 11-26 (46)
297 2eq4_A Zinc finger protein 224 29.2 24 0.00084 21.7 1.7 16 361-376 11-26 (46)
298 2y4t_A DNAJ homolog subfamily 29.1 2.2E+02 0.0074 26.2 9.1 101 111-212 214-322 (450)
299 2eq3_A Zinc finger protein 347 29.0 17 0.00057 22.6 0.8 16 361-376 11-26 (46)
300 2ytm_A Zinc finger protein 28 28.9 24 0.00083 21.9 1.6 16 361-376 11-26 (46)
301 2epw_A Zinc finger protein 268 28.9 19 0.00063 22.3 1.0 16 361-376 11-26 (46)
302 2em4_A Zinc finger protein 28 28.8 16 0.00055 22.8 0.7 16 361-376 11-26 (46)
303 2xpi_A Anaphase-promoting comp 28.6 2.8E+02 0.0095 26.7 10.1 21 113-133 412-432 (597)
304 2ytt_A Zinc finger protein 473 28.5 26 0.00089 21.7 1.7 16 361-376 11-26 (46)
305 2ep3_A Zinc finger protein 484 28.3 19 0.00066 22.3 1.0 16 361-376 11-26 (46)
306 2em2_A Zinc finger protein 28 28.3 19 0.00066 22.3 1.0 16 361-376 11-26 (46)
307 2iyb_E Testin, TESS, TES; LIM 28.2 19 0.00065 25.0 1.1 37 317-355 24-64 (65)
308 2eme_A Zinc finger protein 473 28.2 20 0.00067 22.2 1.0 16 361-376 11-26 (46)
309 2fbn_A 70 kDa peptidylprolyl i 28.1 2.4E+02 0.0081 22.8 9.4 95 111-212 41-149 (198)
310 2yto_A Zinc finger protein 484 28.1 17 0.00058 22.6 0.7 16 361-376 11-26 (46)
311 2eoy_A Zinc finger protein 473 28.0 17 0.00058 22.6 0.7 16 361-376 11-26 (46)
312 1fv5_A First zinc finger of U- 27.9 16 0.00054 22.6 0.5 16 361-376 7-22 (36)
313 4gyw_A UDP-N-acetylglucosamine 27.7 4.9E+02 0.017 26.9 12.3 91 113-212 82-172 (723)
314 2el4_A Zinc finger protein 268 27.7 20 0.0007 22.1 1.0 16 361-376 11-26 (46)
315 2ytg_A ZFP-95, zinc finger pro 27.6 20 0.00068 22.2 1.0 16 361-376 11-26 (46)
316 2eor_A Zinc finger protein 224 27.5 21 0.00071 22.1 1.1 16 361-376 11-26 (46)
317 3as5_A MAMA; tetratricopeptide 27.4 2.1E+02 0.0071 21.9 11.2 23 112-134 12-34 (186)
318 3zbh_A ESXA; unknown function, 27.4 1.8E+02 0.0062 21.2 8.6 33 8-44 12-44 (99)
319 3na7_A HP0958; flagellar bioge 27.3 3.3E+02 0.011 24.2 10.1 20 24-43 88-107 (256)
320 2em3_A Zinc finger protein 28 27.1 18 0.00063 22.4 0.7 16 361-376 11-26 (46)
321 3tul_A Cell invasion protein S 27.1 2.7E+02 0.0093 23.1 9.0 40 11-50 61-100 (158)
322 2emh_A Zinc finger protein 484 27.1 21 0.00073 22.1 1.1 16 361-376 11-26 (46)
323 1rut_X Flinc4, fusion protein 27.0 18 0.0006 31.2 0.8 54 318-374 27-81 (188)
324 2ene_A Zinc finger protein 347 27.0 20 0.00069 22.2 0.9 16 361-376 11-26 (46)
325 2emf_A Zinc finger protein 484 27.0 20 0.00069 22.3 0.9 16 361-376 11-26 (46)
326 2q7f_A YRRB protein; TPR, prot 27.0 2.6E+02 0.0088 22.8 8.7 93 109-210 126-218 (243)
327 2ytj_A Zinc finger protein 484 26.9 21 0.00071 22.1 1.0 16 361-376 11-26 (46)
328 3rkv_A Putative peptidylprolyl 26.9 2.2E+02 0.0076 22.1 11.4 95 111-212 14-124 (162)
329 2en8_A Zinc finger protein 224 26.8 21 0.00073 22.0 1.0 16 361-376 11-26 (46)
330 3lqh_A Histone-lysine N-methyl 26.8 57 0.0019 28.2 4.0 52 323-374 3-66 (183)
331 2eq0_A Zinc finger protein 347 26.8 22 0.00074 22.0 1.0 16 361-376 11-26 (46)
332 2eml_A Zinc finger protein 28 26.8 21 0.00072 22.1 1.0 16 361-376 11-26 (46)
333 2eox_A Zinc finger protein 473 26.7 17 0.00057 22.4 0.4 16 361-376 11-26 (44)
334 2yu8_A Zinc finger protein 347 26.6 21 0.00072 22.1 0.9 16 361-376 11-26 (46)
335 3as5_A MAMA; tetratricopeptide 26.6 2.2E+02 0.0074 21.8 9.6 94 110-212 78-171 (186)
336 3knv_A TNF receptor-associated 26.6 12 0.00042 30.9 -0.3 53 322-376 66-120 (141)
337 2em9_A Zinc finger protein 224 26.5 22 0.00075 22.0 1.0 16 361-376 11-26 (46)
338 3iuf_A Zinc finger protein UBI 26.5 21 0.00072 22.8 0.9 16 361-376 6-21 (48)
339 2ep2_A Zinc finger protein 484 26.5 22 0.00075 22.0 1.0 16 361-376 11-26 (46)
340 1wig_A KIAA1808 protein; LIM d 26.5 22 0.00075 25.4 1.1 41 317-358 25-66 (73)
341 2ytk_A Zinc finger protein 347 26.5 21 0.00071 22.1 0.9 16 361-376 11-26 (46)
342 3pwf_A Rubrerythrin; non heme 26.4 23 0.00078 30.3 1.4 23 113-135 27-49 (170)
343 2em5_A ZFP-95, zinc finger pro 26.3 22 0.00074 22.1 1.0 16 361-376 11-26 (46)
344 2emx_A Zinc finger protein 268 26.3 22 0.00075 21.8 1.0 16 361-376 9-24 (44)
345 1elw_A TPR1-domain of HOP; HOP 26.3 1.7E+02 0.0058 20.5 10.1 94 111-213 7-100 (118)
346 2eoz_A Zinc finger protein 473 26.3 15 0.00051 22.9 0.2 16 361-376 11-26 (46)
347 1hh8_A P67PHOX, NCF-2, neutrop 26.2 2.6E+02 0.0088 22.5 10.7 117 110-230 39-166 (213)
348 2d9k_A FLN29 gene product; zin 26.2 18 0.0006 26.1 0.5 36 343-378 23-59 (75)
349 3nf1_A KLC 1, kinesin light ch 26.1 3E+02 0.01 23.3 11.1 98 109-210 28-136 (311)
350 2em7_A Zinc finger protein 224 25.9 23 0.00078 21.9 1.0 16 361-376 11-26 (46)
351 2jtn_A LIM domain-binding prot 25.9 33 0.0011 29.1 2.4 39 317-355 141-180 (182)
352 2eoo_A ZFP-95, zinc finger pro 25.9 23 0.00077 22.0 1.0 16 361-376 11-26 (46)
353 2emm_A ZFP-95, zinc finger pro 25.9 23 0.00078 21.9 1.0 16 361-376 11-26 (46)
354 2emy_A Zinc finger protein 268 25.9 22 0.00074 22.0 0.9 16 361-376 11-26 (46)
355 2epr_A POZ-, at HOOK-, and zin 25.5 53 0.0018 20.4 2.9 10 361-370 39-48 (48)
356 1na0_A Designed protein CTPR3; 25.2 1.8E+02 0.0062 20.5 9.9 94 110-212 11-104 (125)
357 2em8_A Zinc finger protein 224 25.1 21 0.00072 22.2 0.7 16 361-376 11-26 (46)
358 1iml_A CRIP, cysteine rich int 25.1 41 0.0014 24.0 2.4 47 318-371 22-70 (76)
359 2epu_A Zinc finger protein 32; 25.1 16 0.00056 22.6 0.2 16 361-376 11-26 (45)
360 1wji_A Tudor domain containing 25.1 60 0.0021 22.9 3.2 24 151-174 24-49 (63)
361 2el6_A Zinc finger protein 268 25.0 24 0.00083 21.8 1.0 16 361-376 11-26 (46)
362 2rgt_A Fusion of LIM/homeobox 25.0 59 0.002 27.1 3.8 50 318-375 28-78 (169)
363 1a17_A Serine/threonine protei 24.9 2.3E+02 0.0078 21.5 10.2 94 110-212 15-108 (166)
364 2dak_A Ubiquitin carboxyl-term 24.8 56 0.0019 22.9 3.0 24 151-174 24-49 (63)
365 1x6a_A LIMK-2, LIM domain kina 24.8 51 0.0017 23.7 3.0 40 317-357 35-76 (81)
366 2emp_A Zinc finger protein 347 24.8 25 0.00084 21.8 1.0 16 361-376 11-26 (46)
367 1yui_A GAGA-factor; complex (D 24.7 24 0.0008 23.0 0.9 15 361-375 23-37 (54)
368 2l3k_A Rhombotin-2, linker, LI 24.7 47 0.0016 26.2 3.0 40 317-357 30-70 (123)
369 2dar_A PDZ and LIM domain prot 24.6 47 0.0016 24.5 2.8 38 317-356 45-83 (90)
370 2ko5_A Ring finger protein Z; 24.5 16 0.00055 28.3 0.0 47 319-372 25-71 (99)
371 2enc_A Zinc finger protein 224 24.4 25 0.00087 21.7 1.0 16 361-376 11-26 (46)
372 2dba_A Smooth muscle cell asso 24.3 2.2E+02 0.0074 21.1 12.0 98 108-212 28-126 (148)
373 3gyz_A Chaperone protein IPGC; 24.1 2.7E+02 0.0094 22.2 8.9 93 112-213 40-132 (151)
374 2ytd_A Zinc finger protein 473 24.1 26 0.00088 21.7 1.0 16 361-376 11-26 (46)
375 2eoe_A Zinc finger protein 347 24.1 23 0.0008 21.8 0.8 16 361-376 11-26 (46)
376 3he5_B Synzip2; heterodimeric 24.0 1.5E+02 0.0052 19.2 5.0 38 6-44 8-45 (52)
377 1sp2_A SP1F2; zinc finger, tra 24.0 34 0.0012 18.8 1.5 15 362-376 2-18 (31)
378 2wpv_A GET4, UPF0363 protein Y 23.9 4.4E+02 0.015 24.5 10.0 90 105-197 131-252 (312)
379 1ify_A HHR23A, UV excision rep 23.8 70 0.0024 21.2 3.2 22 151-172 23-46 (49)
380 3uul_A Utrophin; spectrin repe 23.8 2.2E+02 0.0077 21.3 6.9 65 22-88 5-69 (118)
381 2o6n_A RH4B designed peptide; 23.6 1.1E+02 0.0037 18.4 3.6 31 3-43 4-34 (35)
382 1fxk_A Prefoldin; archaeal pro 23.6 2.4E+02 0.0081 21.2 11.5 67 26-92 25-106 (107)
383 2ema_A Zinc finger protein 347 23.5 23 0.0008 21.9 0.7 16 361-376 11-26 (46)
384 2ep0_A Zinc finger protein 28 23.5 27 0.00091 21.6 1.0 16 361-376 11-26 (46)
385 3zx6_A HAMP, methyl-accepting 23.5 4.4E+02 0.015 24.4 10.9 31 5-35 185-215 (341)
386 2yso_A ZFP-95, zinc finger pro 23.4 27 0.00094 21.5 1.0 16 361-376 11-26 (46)
387 2jtn_A LIM domain-binding prot 23.2 50 0.0017 28.0 3.0 50 318-375 82-132 (182)
388 1whc_A RSGI RUH-027, UBA/UBX 3 23.0 75 0.0026 22.4 3.4 24 151-174 24-50 (64)
389 3ghg_A Fibrinogen alpha chain; 23.0 1.5E+02 0.0052 29.8 6.7 20 70-89 136-155 (562)
390 2ysp_A Zinc finger protein 224 22.7 22 0.00074 22.1 0.4 16 361-376 11-26 (46)
391 2eod_A TNF receptor-associated 22.7 38 0.0013 22.9 1.8 34 342-375 15-50 (66)
392 2ej4_A Zinc finger protein ZIC 22.6 1.3E+02 0.0045 21.4 5.0 14 363-376 63-76 (95)
393 1b8t_A Protein (CRP1); LIM dom 22.3 63 0.0022 27.6 3.5 39 317-357 28-67 (192)
394 1wiv_A UBP14, ubiquitin-specif 22.2 75 0.0026 23.1 3.4 23 151-173 44-68 (73)
395 1deq_A Fibrinogen (alpha chain 22.2 4.4E+02 0.015 25.4 9.5 11 52-62 88-98 (390)
396 2en6_A Zinc finger protein 268 22.0 22 0.00076 22.0 0.3 16 361-376 11-26 (46)
397 4ae4_A Ubiquitin-associated pr 22.0 59 0.002 26.0 3.0 21 151-171 91-113 (118)
398 2en1_A Zinc finger protein 224 21.9 24 0.0008 21.9 0.5 16 361-376 11-26 (46)
399 1xnf_A Lipoprotein NLPI; TPR, 21.8 3.5E+02 0.012 22.5 11.0 20 113-132 48-67 (275)
400 2cpw_A CBL-interacting protein 21.8 79 0.0027 22.3 3.3 23 151-173 34-59 (64)
401 2lcq_A Putative toxin VAPC6; P 21.5 20 0.00069 30.2 0.1 10 363-372 149-158 (165)
402 1m1j_B Fibrinogen beta chain; 21.4 3.3E+02 0.011 26.9 8.9 62 22-90 92-153 (464)
403 1x4l_A Skeletal muscle LIM-pro 21.3 35 0.0012 24.0 1.4 37 317-355 29-66 (72)
404 2egq_A FHL1 protein; LIM domai 21.1 34 0.0012 24.4 1.3 35 318-354 41-76 (77)
405 2dai_A Ubadc1, ubiquitin assoc 21.0 88 0.003 23.3 3.6 23 152-174 45-69 (83)
406 1wao_1 Serine/threonine protei 21.0 2.6E+02 0.0089 27.1 8.2 116 74-209 19-134 (477)
407 1ffk_W Ribosomal protein L37AE 21.0 59 0.002 23.8 2.5 21 351-371 16-36 (73)
408 2d8x_A Protein pinch; LIM doma 20.9 51 0.0018 22.9 2.2 38 318-357 26-64 (70)
409 3cv0_A Peroxisome targeting si 20.9 3.9E+02 0.013 22.8 9.1 88 114-210 27-114 (327)
410 2ho1_A Type 4 fimbrial biogene 20.9 3.5E+02 0.012 22.2 11.5 96 109-213 106-203 (252)
411 1veg_A NEDD8 ultimate buster-1 20.8 67 0.0023 24.2 2.8 25 151-175 44-70 (83)
412 2d8y_A Eplin protein; LIM doma 20.7 67 0.0023 23.7 3.0 38 317-356 36-74 (91)
413 3ter_A Mammalian stromal inter 20.6 2.6E+02 0.009 22.9 6.6 12 6-17 64-75 (136)
414 3sxm_A Transcriptional regulat 20.6 1E+02 0.0035 24.1 4.3 31 143-173 96-126 (140)
415 2p06_A Hypothetical protein AF 20.4 80 0.0027 23.7 3.2 45 121-165 22-84 (114)
416 1b8t_A Protein (CRP1); LIM dom 20.2 67 0.0023 27.4 3.2 48 317-371 136-184 (192)
417 2j5c_A 1,8-cineole synthase; t 20.2 1.6E+02 0.0055 30.0 6.5 119 108-226 124-269 (569)
418 2cur_A Skeletal muscle LIM-pro 20.1 60 0.002 22.5 2.4 38 317-356 25-63 (69)
419 1x61_A Thyroid receptor intera 20.0 74 0.0025 22.1 2.9 39 317-357 27-66 (72)
No 1
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=3.5e-10 Score=88.25 Aligned_cols=63 Identities=25% Similarity=0.725 Sum_probs=52.9
Q ss_pred ccccceeccccccccCCCC-CCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccccc
Q 016792 318 QFHSIFVCPVSKEQTSDDN-PPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQL 380 (382)
Q Consensus 318 ~~hS~~~Cpi~~~~~~~~N-pp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v 380 (382)
.....+.||||.+.+.+.+ .|+++||||+||..|+.+|.+...+..+||+|+..+...+++.+
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~i~~l 74 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQL 74 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSSTTTS
T ss_pred hccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccchhHHHH
Confidence 3566789999999987655 49999999999999999998765446899999999988877654
No 2
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.97 E-value=2.7e-10 Score=89.13 Aligned_cols=53 Identities=19% Similarity=0.247 Sum_probs=47.3
Q ss_pred ccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
...|.||||++.|.+ ||++||||+|++.||.++..+ ..+||.|+..+...++.
T Consensus 12 p~~~~CpI~~~~m~d---PV~~~cGhtf~r~~I~~~l~~---~~~cP~~~~~l~~~~l~ 64 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTD---PVRLPSGTVMDRSIILRHLLN---SPTDPFNRQMLTESMLE 64 (85)
T ss_dssp CTTTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHH---CSBCTTTCCBCCGGGCE
T ss_pred chheECcccCchhcC---CeECCCCCEECHHHHHHHHhc---CCCCCCCcCCCChHhcc
Confidence 457999999999998 999999999999999999875 36999999999877654
No 3
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.94 E-value=4.5e-10 Score=85.84 Aligned_cols=54 Identities=31% Similarity=0.465 Sum_probs=47.0
Q ss_pred ccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
.+.|.||||.+.+.+ |+++||||+||+.||.++.+.+ ..+||.|+..+...++.
T Consensus 6 ~~~~~C~IC~~~~~~---Pv~~~CgH~fc~~Ci~~~~~~~--~~~CP~C~~~~~~~~l~ 59 (78)
T 1t1h_A 6 PEYFRCPISLELMKD---PVIVSTGQTYERSSIQKWLDAG--HKTCPKSQETLLHAGLT 59 (78)
T ss_dssp SSSSSCTTTSCCCSS---EEEETTTEEEEHHHHHHHHTTT--CCBCTTTCCBCSSCCCE
T ss_pred cccCCCCCccccccC---CEEcCCCCeecHHHHHHHHHHC--cCCCCCCcCCCChhhCc
Confidence 457899999999977 9999999999999999998753 57999999998876654
No 4
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=5e-10 Score=84.36 Aligned_cols=57 Identities=25% Similarity=0.735 Sum_probs=48.4
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
....+.||||.+.+.+ |+++||||+||..|+.+|.+..++..+||.|+..+..++++
T Consensus 17 ~~~~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~r 73 (73)
T 2ysl_A 17 LQEEVICPICLDILQK---PVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 73 (73)
T ss_dssp CCCCCBCTTTCSBCSS---EEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCCCC
T ss_pred CccCCEeccCCcccCC---eEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcccCC
Confidence 3456899999998875 99999999999999999987533468999999999888764
No 5
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.92 E-value=3.5e-08 Score=92.74 Aligned_cols=53 Identities=19% Similarity=0.186 Sum_probs=45.9
Q ss_pred cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 321 SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
+.|.||||.+.|.+ ||++||||+||+.||.++...++ ..||.|+..++..+++
T Consensus 207 ~~~~c~i~~~~~~d---Pv~~~~gh~f~~~~i~~~~~~~~--~~cP~~~~~~~~~~l~ 259 (281)
T 2c2l_A 207 DYLCGKISFELMRE---PCITPSGITYDRKDIEEHLQRVG--HFNPVTRSPLTQEQLI 259 (281)
T ss_dssp STTBCTTTCSBCSS---EEECSSCCEEETTHHHHHHHHTC--SSCTTTCCCCCGGGCE
T ss_pred cccCCcCcCCHhcC---CeECCCCCEECHHHHHHHHHHCC--CCCcCCCCCCchhcCc
Confidence 47899999999998 99999999999999999987643 3499999999877654
No 6
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.92 E-value=5e-10 Score=82.06 Aligned_cols=55 Identities=9% Similarity=0.254 Sum_probs=48.5
Q ss_pred ceeccccccccCCCCCCeec-cCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 322 IFVCPVSKEQTSDDNPPMIM-SCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l-~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
.|.||||++.|.+ ||+. +|||||++++|.+|.+.++ +||.|++....+++..+++
T Consensus 3 ~~~CpIs~~~m~d---PV~~~~sG~~yer~~I~~~l~~~~---~cP~t~~~L~~~~Lip~~~ 58 (61)
T 2bay_A 3 HMLCAISGKVPRR---PVLSPKSRTIFEKSLLEQYVKDTG---NDPITNEPLSIEEIVEIVP 58 (61)
T ss_dssp -CCCTTTCSCCSS---EEEETTTTEEEEHHHHHHHHHHHS---BCTTTCCBCCGGGCEECCC
T ss_pred eEEecCCCCCCCC---CEEeCCCCcEEcHHHHHHHHHhCC---CCcCCcCCCChhhcEECcc
Confidence 4899999999986 8999 9999999999999987642 5999999999999988764
No 7
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=4.7e-10 Score=89.38 Aligned_cols=56 Identities=29% Similarity=0.619 Sum_probs=45.8
Q ss_pred ccceeccccccccCCCCCCeecc-CchhhhHHHHHHHHhcC---CCccccCC--CCCc-CCccccc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMS-CGHVLCRQSINKMSKNH---SRTFKCPY--CPSD-IDAAQCR 378 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~-cGhv~~~~~l~~l~~~~---~~~~kCP~--c~~~-~~~~~~~ 378 (382)
...|.||||++.|.+ ||++| |||+|++.||.++...+ .+.++||. |+.. +...+++
T Consensus 5 ~~~~~CPI~~~~~~d---PV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~ 67 (94)
T 2yu4_A 5 SSGFTCPITKEEMKK---PVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLI 67 (94)
T ss_dssp SSCCBCTTTCSBCSS---EEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEE
T ss_pred CcEeECcCcCchhcC---CEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCc
Confidence 346899999999988 99996 99999999999997653 24689999 8877 6665543
No 8
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.92 E-value=4.2e-10 Score=90.80 Aligned_cols=53 Identities=17% Similarity=0.264 Sum_probs=47.1
Q ss_pred ccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
...|.||||++.|.+ ||++||||+|++.||.++..+ ..+||.|+..+...++.
T Consensus 27 p~~~~CpI~~~~m~d---PV~~~cGhtf~r~~I~~~l~~---~~~cP~~~~~l~~~~L~ 79 (100)
T 2kre_A 27 PDEFRDPLMDTLMTD---PVRLPSGTIMDRSIILRHLLN---SPTDPFNRQTLTESMLE 79 (100)
T ss_dssp STTTBCTTTCSBCSS---EEEETTTEEEEHHHHHHHTTS---CSBCSSSCCBCCTTSSE
T ss_pred cHhhCCcCccCcccC---CeECCCCCEEchHHHHHHHHc---CCCCCCCCCCCChhhce
Confidence 457999999999998 999999999999999999874 46999999998877654
No 9
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.88 E-value=6.1e-10 Score=83.34 Aligned_cols=59 Identities=27% Similarity=0.637 Sum_probs=51.4
Q ss_pred cceeccccccccCC----CCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 321 SIFVCPVSKEQTSD----DNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 321 S~~~Cpi~~~~~~~----~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
..+.||||.+.+.+ ...++.++|||+|+..|+.+|.+.. .+||.|+..+..++++++||
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~~~~~~~~~~~l 71 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA---NTCPTCRKKINHKRYHPIYI 71 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHC---SBCTTTCCBCCCCSCCCCCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcC---CCCCCCCCccChhheeeccC
Confidence 46789999998765 2445899999999999999998764 59999999999999999997
No 10
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.87 E-value=5.6e-10 Score=81.65 Aligned_cols=58 Identities=28% Similarity=0.663 Sum_probs=50.4
Q ss_pred ceeccccccccCC----CCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 322 IFVCPVSKEQTSD----DNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 322 ~~~Cpi~~~~~~~----~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
.+.||||.+.+.+ ...+++++|||+|+..++.+|.+.. .+||.|+..+..+++++|||
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~~~~~~~~~~~l 64 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA---NTCPTCRKKINHKRYHPIYI 64 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHC---SBCTTTCCBCTTTCEEECCC
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcC---CCCCCCCccCCccceeeeeC
Confidence 4689999998754 2456899999999999999998763 59999999999999999997
No 11
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.85 E-value=1.2e-09 Score=87.86 Aligned_cols=53 Identities=19% Similarity=0.308 Sum_probs=46.8
Q ss_pred ccceeccccccccCCCCCCeeccCc-hhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMSCG-HVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~cG-hv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
...|.||||++.|.+ ||++||| |+|++.||.++... ..+||.|+..+...++.
T Consensus 20 p~~~~CpI~~~~m~d---PV~~~cG~htf~r~cI~~~l~~---~~~cP~~~~~l~~~~L~ 73 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCD---PVVLPSSRVTVDRSTIARHLLS---DQTDPFNRSPLTMDQIR 73 (98)
T ss_dssp CTTTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHTTT---SCBCTTTCSBCCTTTSE
T ss_pred cHhcCCcCccccccC---CeECCCCCeEECHHHHHHHHHh---CCCCCCCCCCCChhhce
Confidence 347899999999998 9999999 99999999999875 35899999999877654
No 12
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.85 E-value=1.4e-09 Score=96.57 Aligned_cols=54 Identities=19% Similarity=0.170 Sum_probs=47.0
Q ss_pred cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccccc
Q 016792 321 SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQ 379 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~ 379 (382)
+.|.||||++.|.+ ||++||||+||+.||.++...++ . .||.|+..+...++..
T Consensus 105 ~~f~CPI~~elm~D---PV~~~~Ghtfer~~I~~~l~~~~-~-tcP~t~~~l~~~~L~p 158 (179)
T 2f42_A 105 DYLCGKISFELMRE---PCITPSGITYDRKDIEEHLQRVG-H-FDPVTRSPLTQDQLIP 158 (179)
T ss_dssp GGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHTC-S-BCTTTCCBCCGGGCEE
T ss_pred HhhcccCccccCCC---CeECCCCCEECHHHHHHHHHhCC-C-CCCCCcCCCChhhCcc
Confidence 47899999999998 99999999999999999987643 3 6999999998877653
No 13
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.84 E-value=1.2e-09 Score=80.51 Aligned_cols=59 Identities=24% Similarity=0.506 Sum_probs=47.8
Q ss_pred ceecccccc-ccCCCC-CCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 322 IFVCPVSKE-QTSDDN-PPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 322 ~~~Cpi~~~-~~~~~N-pp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
.+.||||.+ .+.+.. ++++++|||+||..++.++..++ ..+||.|+..+..++++.+.|
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~~~~~~~~~ 63 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRG--AGNCPECGTPLRKSNFRVQLF 63 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTT--SSSCTTTCCCCSSCCCEEECC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcC--CCcCCCCCCccccccceeecc
Confidence 357999999 665422 23678999999999999996554 579999999999999988765
No 14
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=3.3e-09 Score=77.64 Aligned_cols=47 Identities=28% Similarity=0.842 Sum_probs=40.4
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCC
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYC 368 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c 368 (382)
+...+.||||.+.+.+ |+.+||||+||+.+|.+|.+..++..+||.|
T Consensus 17 ~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 17 LQEEVICPICLDILQK---PVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCBCTTTCSBCSS---CEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred CccCCCCCcCCchhCC---eEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 4557899999998875 8999999999999999998764446899998
No 15
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.80 E-value=4.5e-09 Score=81.06 Aligned_cols=58 Identities=21% Similarity=0.503 Sum_probs=48.6
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcC---CCccccCCCCCcCCcccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNH---SRTFKCPYCPSDIDAAQCRQ 379 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~---~~~~kCP~c~~~~~~~~~~~ 379 (382)
....+.||||.+.+.+ |+++||||+||..|+.++.... .+..+||+|+..+..++++.
T Consensus 16 ~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~ 76 (85)
T 2ecw_A 16 IKEEVTCPICLELLKE---PVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLKP 76 (85)
T ss_dssp CCTTTSCTTTCSCCSS---CEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCCEE
T ss_pred CccCCCCcCCChhhCc---ceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhCCc
Confidence 3456799999998866 8999999999999999997762 23689999999998877654
No 16
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.80 E-value=1.2e-09 Score=83.50 Aligned_cols=59 Identities=25% Similarity=0.586 Sum_probs=48.7
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcC----CCccccCCCCCcCCccccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNH----SRTFKCPYCPSDIDAAQCRQL 380 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~----~~~~kCP~c~~~~~~~~~~~v 380 (382)
....+.||||.+.+.+ |+++||||+||+.|+.++.+.. .+..+||.|+..+...+++.-
T Consensus 9 ~~~~~~C~IC~~~~~~---p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l~~n 71 (79)
T 2egp_A 9 VQEEVTCPICLELLTE---PLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQAN 71 (79)
T ss_dssp CCCCCEETTTTEECSS---CCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGGGTC
T ss_pred cccCCCCcCCCcccCC---eeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhCCcC
Confidence 3457899999999876 8999999999999999987652 236899999999988776643
No 17
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=3e-09 Score=82.09 Aligned_cols=59 Identities=22% Similarity=0.575 Sum_probs=48.8
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhc---CCCccccCCCCCcCCccccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKN---HSRTFKCPYCPSDIDAAQCRQL 380 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~---~~~~~kCP~c~~~~~~~~~~~v 380 (382)
....+.||||.+.+.+ |+++||||+||..|+.++... ..+..+||.|+..+...+++.-
T Consensus 16 ~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n 77 (85)
T 2ecv_A 16 VKEEVTCPICLELLTQ---PLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPN 77 (85)
T ss_dssp CCCCCCCTTTCSCCSS---CBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCCCS
T ss_pred ccCCCCCCCCCcccCC---ceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcCcc
Confidence 3457899999999865 899999999999999998765 2346899999999998776643
No 18
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=3.3e-09 Score=78.45 Aligned_cols=53 Identities=19% Similarity=0.472 Sum_probs=45.3
Q ss_pred ccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQC 377 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~ 377 (382)
...+.||||.+.+.+ |++++|||+||+.|+.++.+.+ ..+||.|+..+..+++
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~~~i 65 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCS---PKQTECGHRFCESCMAALLSSS--SPKCTACQESIVKDKV 65 (66)
T ss_dssp CCCEECTTTCCEESS---CCCCSSSCCCCHHHHHHHHTTS--SCCCTTTCCCCCTTTC
T ss_pred CcCCCCCCCChHhcC---eeECCCCCHHHHHHHHHHHHhC--cCCCCCCCcCCChhhc
Confidence 457899999999865 8889999999999999998643 5799999999887654
No 19
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.79 E-value=4.3e-09 Score=82.95 Aligned_cols=50 Identities=20% Similarity=0.597 Sum_probs=43.5
Q ss_pred cccceeccccccccCCCCCCeecc-CchhhhHHHHHHHHhcCCCccccCCCCCcC
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMS-CGHVLCRQSINKMSKNHSRTFKCPYCPSDI 372 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~-cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~ 372 (382)
+...+.||||.+.+.+ |+++| |||+||+.||.++....+ .+.||.|+..+
T Consensus 10 ~~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~-~~~CP~Cr~~~ 60 (92)
T 3ztg_A 10 IPDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLESD-EHTCPTCHQND 60 (92)
T ss_dssp CCTTTEETTTTEECSS---CEECTTTCCEECHHHHHHHHHHCT-TCCCTTTCCSS
T ss_pred CCcCCCCCCCChhhcC---ceECCCCCCHHHHHHHHHHHHhcC-CCcCcCCCCcC
Confidence 4457899999999986 99999 999999999999986542 58999999997
No 20
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.78 E-value=3.4e-09 Score=86.43 Aligned_cols=57 Identities=25% Similarity=0.673 Sum_probs=48.6
Q ss_pred ccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccccc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQ 379 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~ 379 (382)
...+.||||.+.+.+ |+++||||+||..|+.++.....+.++||.|+..+...+++.
T Consensus 19 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~~~ 75 (112)
T 1jm7_A 19 QKILECPICLELIKE---PVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQE 75 (112)
T ss_dssp HHHTSCSSSCCCCSS---CCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBC
T ss_pred cCCCCCcccChhhcC---eEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhcCc
Confidence 456799999998865 899999999999999999876544689999999998877654
No 21
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.72 E-value=6.7e-09 Score=83.45 Aligned_cols=59 Identities=17% Similarity=0.437 Sum_probs=50.4
Q ss_pred ccccceeccccccccCCCCCCee-ccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccccccc
Q 016792 318 QFHSIFVCPVSKEQTSDDNPPMI-MSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLY 381 (382)
Q Consensus 318 ~~hS~~~Cpi~~~~~~~~Npp~~-l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~ 381 (382)
.+...+.||||.+.+.+ |+. ++|||+||..||.+|.+.. ...||.|+..+..+++++.+
T Consensus 18 ~l~~~~~C~IC~~~~~~---p~~~~~CgH~FC~~Ci~~~~~~~--~~~CP~Cr~~~~~~~l~~~~ 77 (100)
T 3lrq_A 18 SIAEVFRCFICMEKLRD---ARLCPHCSKLCCFSCIRRWLTEQ--RAQCPHCRAPLQLRELVNCR 77 (100)
T ss_dssp HHHHHTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHHHT--CSBCTTTCCBCCGGGCEECT
T ss_pred cCCCCCCCccCCccccC---ccccCCCCChhhHHHHHHHHHHC--cCCCCCCCCcCCHHHhHhhH
Confidence 34567899999999976 888 9999999999999998775 37999999999988876543
No 22
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.69 E-value=9e-09 Score=85.80 Aligned_cols=51 Identities=24% Similarity=0.660 Sum_probs=44.4
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
+...+.||||.+.+.+ |+++||||+||+.||..+...+ ...||.|+..+..
T Consensus 49 ~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 49 VEETFQCICCQELVFR---PITTVCQHNVCKDCLDRSFRAQ--VFSCPACRYDLGR 99 (124)
T ss_dssp HHHHTBCTTTSSBCSS---EEECTTSCEEEHHHHHHHHHTT--CCBCTTTCCBCCT
T ss_pred CccCCCCCcCChHHcC---cEEeeCCCcccHHHHHHHHhHC--cCCCCCCCccCCC
Confidence 3456899999999986 9999999999999999998743 5799999999876
No 23
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.69 E-value=7.4e-09 Score=78.44 Aligned_cols=54 Identities=19% Similarity=0.549 Sum_probs=44.9
Q ss_pred cccceeccccccccCCCCCCeecc-CchhhhHHHHHHHHhcCCCccccCCCCCcCCccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMS-CGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~-cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~ 376 (382)
+...+.||||.+.+.+ |+++| |||+||+.||.++.+..+ ...||.|+..+...+
T Consensus 12 ~~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~-~~~CP~Cr~~~~~~~ 66 (74)
T 2yur_A 12 IPDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLESD-EHTCPTCHQNDVSPD 66 (74)
T ss_dssp SCGGGSCSSSCCCCTT---CEECSSSCCEECTTHHHHHHHHSS-SSCCSSSCCSSCCTT
T ss_pred CCCCCCCcCCChHHhC---CeEcCCCCCHHHHHHHHHHHHhcC-CCcCCCCCCcCCCcc
Confidence 3457899999999976 99999 999999999999987642 579999999865443
No 24
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=2e-08 Score=75.56 Aligned_cols=54 Identities=20% Similarity=0.465 Sum_probs=46.2
Q ss_pred cccceeccccccccCCCCCCeec-cCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIM-SCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l-~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
+...+.||||.+.+.+ |+++ +|||+||..||.++.+. ..+||.|+..+...+..
T Consensus 12 ~~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~~~~~~ 66 (72)
T 2djb_A 12 LTPYILCSICKGYLID---ATTITECLHTFCKSCIVRHFYY---SNRCPKCNIVVHQTQPL 66 (72)
T ss_dssp CCGGGSCTTTSSCCSS---CEECSSSCCEECHHHHHHHHHH---CSSCTTTCCCCCSSCSC
T ss_pred cCCCCCCCCCChHHHC---cCEECCCCCHHHHHHHHHHHHc---CCcCCCcCcccCccccc
Confidence 4457899999998876 8887 99999999999999876 36999999999887654
No 25
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.64 E-value=1.1e-08 Score=87.10 Aligned_cols=47 Identities=28% Similarity=0.682 Sum_probs=40.7
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
-+.||||.+.+.+ |+++||||+||..||.+|.+. ...||.|+..+..
T Consensus 53 ~~~C~iC~~~~~~---~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 53 ELQCIICSEYFIE---AVTLNCAHSFCSYCINEWMKR---KIECPICRKDIKS 99 (138)
T ss_dssp HSBCTTTCSBCSS---EEEETTSCEEEHHHHHHHTTT---CSBCTTTCCBCCC
T ss_pred cCCCcccCcccCC---ceECCCCCCccHHHHHHHHHc---CCcCCCCCCcCCC
Confidence 4579999999976 999999999999999999765 3689999988754
No 26
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.64 E-value=1.8e-08 Score=72.17 Aligned_cols=47 Identities=32% Similarity=0.794 Sum_probs=39.2
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCC
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYC 368 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c 368 (382)
....+.||||.+.+.+ |+++||||+|++.+|.++.+...+..+||.|
T Consensus 12 ~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 12 LQVEASCSVCLEYLKE---PVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp SCCCCBCSSSCCBCSS---CCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cccCCCCccCCcccCc---cEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 3456799999999876 8999999999999999997653346899998
No 27
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=2.3e-08 Score=76.95 Aligned_cols=47 Identities=19% Similarity=0.511 Sum_probs=41.4
Q ss_pred cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCC
Q 016792 321 SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDID 373 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~ 373 (382)
..+.||||.+.+.+ |+++||||+||..|+.+|.+. ...||.|+..+.
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQN---PVVTKCRHYFCESCALEHFRA---TPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCS---EEECTTSCEEEHHHHHHHHHH---CSBCSSSCCBCC
T ss_pred CCCCCcCCCchhcC---eeEccCCCHhHHHHHHHHHHC---CCcCCCcCcccc
Confidence 35799999999866 899999999999999999876 369999999875
No 28
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.59 E-value=1.2e-08 Score=76.53 Aligned_cols=53 Identities=19% Similarity=0.459 Sum_probs=45.1
Q ss_pred cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccccc
Q 016792 321 SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQ 379 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~ 379 (382)
..+.||||.+.+.+ |+.+||||+|+..|+.+|.... .+||.|+..+...++++
T Consensus 14 ~~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~~~~~~---~~CP~Cr~~~~~~~~~~ 66 (71)
T 2d8t_A 14 TVPECAICLQTCVH---PVSLPCKHVFCYLCVKGASWLG---KRCALCRQEIPEDFLDS 66 (71)
T ss_dssp SCCBCSSSSSBCSS---EEEETTTEEEEHHHHHHCTTCS---SBCSSSCCBCCHHHHSC
T ss_pred CCCCCccCCcccCC---CEEccCCCHHHHHHHHHHHHCC---CcCcCcCchhCHhhccC
Confidence 35789999998865 8999999999999999987653 69999999998777654
No 29
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.59 E-value=2.7e-08 Score=85.96 Aligned_cols=51 Identities=25% Similarity=0.671 Sum_probs=44.8
Q ss_pred ccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~ 375 (382)
...+.||||.+.+.+ |+.+||||+||+.||.++...+ .+.||.|+..+...
T Consensus 76 ~~~~~C~IC~~~~~~---pv~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 76 EQSFMCVCCQELVYQ---PVTTECFHNVCKDCLQRSFKAQ--VFSCPACRHDLGQN 126 (150)
T ss_dssp HHHTBCTTTSSBCSS---EEECTTSCEEEHHHHHHHHHTT--CCBCTTTCCBCCTT
T ss_pred ccCCEeecCChhhcC---CEEcCCCCchhHHHHHHHHHhC--CCcCCCCCccCCCC
Confidence 346799999999976 9999999999999999998764 57999999998876
No 30
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.57 E-value=3e-08 Score=79.18 Aligned_cols=54 Identities=22% Similarity=0.515 Sum_probs=46.0
Q ss_pred cccceeccccccccCCCCCCeec-cCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIM-SCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l-~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
+...+.||||.+.+.+ |+++ ||||+||..|+.++... ..+||.|+..+...+.+
T Consensus 19 ~~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~~~~l~ 73 (99)
T 2y43_A 19 IDDLLRCGICFEYFNI---AMIIPQCSHNYCSLCIRKFLSY---KTQCPTCCVTVTEPDLK 73 (99)
T ss_dssp HHHHTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHTT---CCBCTTTCCBCCGGGCE
T ss_pred CCCCCCcccCChhhCC---cCEECCCCCHhhHHHHHHHHHC---CCCCCCCCCcCChhhCC
Confidence 4557899999999876 8887 99999999999999875 36999999999876654
No 31
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.55 E-value=3.2e-08 Score=70.04 Aligned_cols=49 Identities=27% Similarity=0.642 Sum_probs=41.6
Q ss_pred ceeccccccccC-CCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCC
Q 016792 322 IFVCPVSKEQTS-DDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDID 373 (382)
Q Consensus 322 ~~~Cpi~~~~~~-~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~ 373 (382)
...||||.+.+. .+++|+.+||||+|+..++.+|.+.. .+||.|+..+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~~~ 54 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG---YRCPLCSGPSS 54 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT---CCCTTSCCSSC
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC---CcCCCCCCcCC
Confidence 468999999874 45678999999999999999998774 68999998754
No 32
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.54 E-value=4.8e-08 Score=80.71 Aligned_cols=56 Identities=23% Similarity=0.458 Sum_probs=47.6
Q ss_pred ccccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 318 QFHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 318 ~~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
.....+.||||.+.+.+ |+.+||||+||+.||.++.+.+ ..+||.|+..+..+++.
T Consensus 14 ~~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~~~~~ 69 (118)
T 3hct_A 14 PLESKYECPICLMALRE---AVQTPCGHRFCKACIIKSIRDA--GHKCPVDNEILLENQLF 69 (118)
T ss_dssp CCCGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHH--CSBCTTTCCBCCGGGCE
T ss_pred CCCCCCCCCcCChhhcC---eEECCcCChhhHHHHHHHHhhC--CCCCCCCCCCcCHHhcc
Confidence 45667899999999876 8999999999999999998764 24999999999887654
No 33
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.54 E-value=4.6e-08 Score=80.41 Aligned_cols=56 Identities=25% Similarity=0.475 Sum_probs=47.8
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQ 379 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~ 379 (382)
+...+.||||.+.+.+ |+.+||||+||..||.++.+.. ...||.|+..+...++..
T Consensus 20 ~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~~~~~~ 75 (116)
T 1rmd_A 20 FVKSISCQICEHILAD---PVETSCKHLFCRICILRCLKVM--GSYCPSCRYPCFPTDLES 75 (116)
T ss_dssp HHHHTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHT--CSBCTTTCCBCCGGGCBC
T ss_pred ccCCCCCCCCCcHhcC---cEEcCCCCcccHHHHHHHHhHC--cCcCCCCCCCCCHhhccc
Confidence 4457899999999876 9999999999999999998764 368999999998877653
No 34
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.53 E-value=5.8e-08 Score=72.15 Aligned_cols=52 Identities=19% Similarity=0.416 Sum_probs=44.5
Q ss_pred cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcc
Q 016792 321 SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~ 375 (382)
....||||.+.+...++++.+||||+|+..||.+|.+.+ .+||.|+..+...
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~---~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITN---KKCPICRVDIEAQ 64 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHC---SBCTTTCSBSCSC
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcC---CCCcCcCccccCc
Confidence 356899999999877789999999999999999998774 4799999887643
No 35
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.51 E-value=1.6e-08 Score=83.04 Aligned_cols=50 Identities=22% Similarity=0.654 Sum_probs=43.1
Q ss_pred ccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
...+.||||.+.+.+ |+++||||+||..||.++...+ ...||.|+..+..
T Consensus 13 ~~~~~C~iC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILVE---PVTLPCNHTLCKPCFQSTVEKA--SLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCSS---CEECTTSCEECHHHHCCCCCTT--TSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccCc---eeEcCCCCHHhHHHHHHHHhHC--cCCCCCCCcccCc
Confidence 456899999999876 9999999999999999987653 5799999998764
No 36
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.51 E-value=3.6e-08 Score=75.10 Aligned_cols=57 Identities=23% Similarity=0.440 Sum_probs=48.1
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
....+.||||.+.+.+....+.+||||+|+..||.+|.+.. .+||+|+..+...+..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~---~~CP~Cr~~~~~~~~~ 68 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQH---DSCPVCRKSLTGQNTA 68 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTT---CSCTTTCCCCCCSCSC
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcC---CcCcCcCCccCCcccC
Confidence 34567999999999877777889999999999999998653 5999999998877654
No 37
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.48 E-value=6.9e-08 Score=76.11 Aligned_cols=52 Identities=13% Similarity=0.372 Sum_probs=44.6
Q ss_pred ccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
-....||||.+.+...+.++.+||||+|+..||.+|.+.. ..||.|+..+..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~---~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKS---GTCPVCRCMFPP 89 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTT---CBCTTTCCBSSC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcC---CcCcCcCccCCC
Confidence 3456899999999888888999999999999999998653 489999987653
No 38
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.47 E-value=7.6e-08 Score=72.83 Aligned_cols=53 Identities=19% Similarity=0.409 Sum_probs=44.9
Q ss_pred ccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~ 375 (382)
.....||||.+.+...+..+.+||||+|+..||.+|.+.. ..||.|+..+..+
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~---~~CP~Cr~~~~~~ 73 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKAN---RTCPICRADSGPS 73 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHC---SSCTTTCCCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcC---CcCcCcCCcCCCC
Confidence 3467899999998876667889999999999999998764 4899999887654
No 39
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.46 E-value=7.8e-08 Score=84.05 Aligned_cols=52 Identities=23% Similarity=0.584 Sum_probs=44.2
Q ss_pred ccccceeccccccccCCCCCCeec-cCchhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 318 QFHSIFVCPVSKEQTSDDNPPMIM-SCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 318 ~~hS~~~Cpi~~~~~~~~Npp~~l-~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
.+...+.||||.+.+.+ |+.+ ||||+||..||.+|.+.+ ...||.|+..+..
T Consensus 50 ~~~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 50 SLHSELMCPICLDMLKN---TMTTKECLHRFCADCIITALRSG--NKECPTCRKKLVS 102 (165)
T ss_dssp CCHHHHBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHHTT--CCBCTTTCCBCCS
T ss_pred hCCCCCCCcccChHhhC---cCEeCCCCChhHHHHHHHHHHhC--cCCCCCCCCcCCC
Confidence 35678899999999876 7776 999999999999998764 5789999998854
No 40
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.46 E-value=4.9e-08 Score=91.00 Aligned_cols=56 Identities=23% Similarity=0.486 Sum_probs=48.2
Q ss_pred cccceeccccccccCCCCCCeec-cCchhhhHHHHHHHHhcCCCccccCC--CCCcCCccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIM-SCGHVLCRQSINKMSKNHSRTFKCPY--CPSDIDAAQCR 378 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l-~cGhv~~~~~l~~l~~~~~~~~kCP~--c~~~~~~~~~~ 378 (382)
..--|.||||++.+.+ ||+. .|||+||+.||.++.+.+ +.++||. |++.+...+.+
T Consensus 178 ~~~el~CPIcl~~f~D---PVts~~CGHsFcR~cI~~~~~~~-~~~~CPvtGCr~~l~~~dL~ 236 (267)
T 3htk_C 178 GKIELTCPITCKPYEA---PLISRKCNHVFDRDGIQNYLQGY-TTRDCPQAACSQVVSMRDFV 236 (267)
T ss_dssp SBCCSBCTTTSSBCSS---EEEESSSCCEEEHHHHHHHSTTC-SCEECSGGGCSCEECGGGEE
T ss_pred CceeeECcCccCcccC---CeeeCCCCCcccHHHHHHHHHhC-CCCCCCcccccCcCchhhCC
Confidence 4667899999999988 9985 999999999999998754 3689999 99988877654
No 41
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.44 E-value=9.4e-08 Score=77.59 Aligned_cols=51 Identities=18% Similarity=0.491 Sum_probs=43.9
Q ss_pred cccceeccccccccCCCCCCeec-cCchhhhHHHHHHHHhcCCCccccCCCCCcCCcc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIM-SCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l-~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~ 375 (382)
+...+.||||.+.+.+ |+.+ ||||+||..||.++.+.+ ..||.|+..+...
T Consensus 12 ~~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~---~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 12 LNPHLMCVLCGGYFID---ATTIIECLHSFCKTCIVRYLETS---KYCPICDVQVHKT 63 (108)
T ss_dssp HGGGTBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHTSC---SBCTTTCCBSCSS
T ss_pred cCCcCCCccCChHHhC---cCEeCCCCChhhHHHHHHHHHhC---CcCcCCCcccccc
Confidence 3457899999999976 8887 999999999999998763 6999999988764
No 42
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.43 E-value=8.4e-08 Score=67.90 Aligned_cols=50 Identities=18% Similarity=0.428 Sum_probs=42.8
Q ss_pred cceeccccccccCCCCCCeecc-CchhhhHHHHHHHHhcCCCccccCCCCCcCC
Q 016792 321 SIFVCPVSKEQTSDDNPPMIMS-CGHVLCRQSINKMSKNHSRTFKCPYCPSDID 373 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~Npp~~l~-cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~ 373 (382)
....||||.+.+.+...++.+| |||+|+..+|.+|.+. ...||.|+..+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~---~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS---HSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT---CCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc---CCcCcCCCCEeE
Confidence 3568999999998888889998 9999999999999765 358999998764
No 43
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.39 E-value=1.9e-07 Score=71.62 Aligned_cols=56 Identities=20% Similarity=0.444 Sum_probs=44.1
Q ss_pred ccceeccccccccCCCCCCeecc--CchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMS--CGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~--cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
...+.||||.+.++..+ +..+| |||.+|+.|+.++...+ .+.||.|++.+....+.
T Consensus 9 ~~~~~CpICle~~~~~d-~~~~p~~CGH~fC~~Cl~~~~~~~--~~~CP~CR~~~~~~~~~ 66 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDD-INFFPCTCGYQICRFCWHRIRTDE--NGLCPACRKPYPEDPAV 66 (78)
T ss_dssp CCCCBCTTTCCBCCTTT-TTCCSSTTSCCCCHHHHHHHTTSS--CSBCTTTCCBCSSCSSC
T ss_pred ccCCcCCccCccCcccc-ccccccCCCCCcCHHHHHHHHhcC--CCCCCCCCCccCCCchh
Confidence 34678999999886533 45555 99999999999997653 57999999999876553
No 44
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.37 E-value=1.4e-07 Score=69.79 Aligned_cols=47 Identities=28% Similarity=0.646 Sum_probs=40.1
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCC
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDID 373 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~ 373 (382)
...||||.+.+. +|++.+||||+|+..|+.+|.+.+ .+||.|+..+.
T Consensus 5 ~~~C~IC~~~~~--~~~~~~~C~H~fc~~Ci~~~~~~~---~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPS--NYSMALPCLHAFCYVCITRWIRQN---PTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCC--SCEEETTTTEEESTTHHHHHHHHS---CSTTTTCCCCC
T ss_pred CCCCeeCCcccc--CCcEecCCCCeeHHHHHHHHHhCc---CcCcCCChhhH
Confidence 457999999874 567999999999999999998764 59999998875
No 45
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.37 E-value=4.4e-08 Score=70.14 Aligned_cols=46 Identities=20% Similarity=0.603 Sum_probs=39.2
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~ 376 (382)
.+.||||.+.+.+ |+++||||+||..++.+ ...+||.|+..+....
T Consensus 6 ~~~C~IC~~~~~~---p~~l~CgH~fC~~Ci~~------~~~~CP~Cr~~~~~~~ 51 (56)
T 1bor_A 6 FLRCQQCQAEAKC---PKLLPCLHTLCSGCLEA------SGMQCPICQAPWPLGA 51 (56)
T ss_dssp CSSCSSSCSSCBC---CSCSTTSCCSBTTTCSS------SSSSCSSCCSSSSCCS
T ss_pred CCCceEeCCccCC---eEEcCCCCcccHHHHcc------CCCCCCcCCcEeecCC
Confidence 5789999998875 89999999999999976 2579999999887654
No 46
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.36 E-value=1.5e-07 Score=69.54 Aligned_cols=51 Identities=29% Similarity=0.658 Sum_probs=42.0
Q ss_pred ccceeccccccccCC----CCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCC
Q 016792 320 HSIFVCPVSKEQTSD----DNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDID 373 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~----~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~ 373 (382)
...+.||||.+.+.+ .+.+++++|||+|+..||.+|.+.. ..||+|+..+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~~~ 67 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA---NTCPTCRKKIN 67 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHC---SSCTTTCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcC---CCCCCCCCccC
Confidence 456789999998754 2345899999999999999998763 59999998765
No 47
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.35 E-value=6.2e-08 Score=79.90 Aligned_cols=52 Identities=15% Similarity=0.517 Sum_probs=44.5
Q ss_pred cccceeccccccccCCCCCCeec-cCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIM-SCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l-~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
+...+.||||.+.+.+ |+++ ||||+||+.||.++.+ ..||.|+..+...+++
T Consensus 19 l~~~~~C~IC~~~~~~---pv~~~~CgH~fC~~Ci~~~~~-----~~CP~Cr~~~~~~~~~ 71 (117)
T 1jm7_B 19 LEKLLRCSRCTNILRE---PVCLGGCEHIFCSNCVSDCIG-----TGCPVCYTPAWIQDLK 71 (117)
T ss_dssp HHHTTSCSSSCSCCSS---CBCCCSSSCCBCTTTGGGGTT-----TBCSSSCCBCSCSSCC
T ss_pred chhCCCCCCCChHhhC---ccEeCCCCCHHHHHHHHHHhc-----CCCcCCCCcCcccccc
Confidence 4567899999999976 8998 9999999999998864 5899999998776654
No 48
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.34 E-value=1.4e-07 Score=78.54 Aligned_cols=59 Identities=27% Similarity=0.637 Sum_probs=48.8
Q ss_pred cceeccccccccCC----CCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 321 SIFVCPVSKEQTSD----DNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 321 S~~~Cpi~~~~~~~----~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
..+.||||.+.+.+ .-.++.++|||+|+.++|.+|.+.. .+||.|++.+...+...+|+
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~~~~~~l~~l~i 68 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA---NTCPTCRKKINHKRYHPIYI 68 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTC---SBCTTTCCBCTTTCEEECBC
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhC---CCCCCCCCcCcccccccccc
Confidence 46799999998865 1223999999999999999998764 49999999999988877653
No 49
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.33 E-value=3.4e-07 Score=68.89 Aligned_cols=50 Identities=22% Similarity=0.364 Sum_probs=42.4
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
...||||.+.+.+....+.+||||+|+..||.+|.+.. ..||.|+..+..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~---~~CP~Cr~~~~~ 64 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR---KVCPLCNMPVLQ 64 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC---SBCTTTCCBCSS
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC---CcCCCcCccccc
Confidence 56899999999876666778999999999999998764 389999987653
No 50
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.29 E-value=1.3e-07 Score=80.80 Aligned_cols=52 Identities=15% Similarity=0.463 Sum_probs=44.4
Q ss_pred ccccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 318 QFHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 318 ~~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
.....|.||||.+.+.+ |+.++|||+||+.||.++.+.+ ..+||.|+.....
T Consensus 27 ~l~~~~~C~IC~~~~~~---pv~~~CgH~FC~~Ci~~~~~~~--~~~CP~Cr~~~~~ 78 (141)
T 3knv_A 27 KLEAKYLCSACRNVLRR---PFQAQCGHRYCSFCLASILSSG--PQNCAACVHEGIY 78 (141)
T ss_dssp GCCGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHGGGS--CEECHHHHHTTCC
T ss_pred cCCcCcCCCCCChhhcC---cEECCCCCccCHHHHHHHHhcC--CCCCCCCCCcccc
Confidence 35678999999999976 8999999999999999998754 4799999886543
No 51
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.29 E-value=1.9e-07 Score=70.68 Aligned_cols=52 Identities=21% Similarity=0.577 Sum_probs=42.3
Q ss_pred cccceeccccccccCCCCCCeeccCchh-hhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHV-LCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv-~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
....+.||||.+...+ |+.+||||+ +|..|+.++ .+||.|+..+. ...+||+
T Consensus 21 ~~~~~~C~iC~~~~~~---~~~~pCgH~~~C~~C~~~~-------~~CP~Cr~~i~--~~~~i~~ 73 (74)
T 4ic3_A 21 LQEEKLCKICMDRNIA---IVFVPCGHLVTCKQCAEAV-------DKCPMCYTVIT--FKQKILM 73 (74)
T ss_dssp HHHHTBCTTTSSSBCC---EEEETTCCBCCCHHHHTTC-------SBCTTTCCBCS--EEEECBC
T ss_pred CccCCCCCCCCCCCCC---EEEcCCCChhHHHHhhhcC-------ccCCCcCcCcc--CcEEEee
Confidence 3456799999998765 899999999 999999866 59999998765 4456664
No 52
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.27 E-value=3.5e-07 Score=69.35 Aligned_cols=52 Identities=21% Similarity=0.612 Sum_probs=41.3
Q ss_pred cccceeccccccccCCCCCCeeccCchh-hhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHV-LCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv-~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
+...+.||||.+...+ |+.+||||+ +|..|+.++ .+||.|+..+.. ..+||+
T Consensus 22 ~~~~~~C~IC~~~~~~---~~~~pCgH~~~C~~C~~~~-------~~CP~Cr~~i~~--~~~i~~ 74 (75)
T 2ecg_A 22 LQEEKLCKICMDRNIA---IVFVPCGHLVTCKQCAEAV-------DKCPMCYTVITF--KQKIFM 74 (75)
T ss_dssp HHHHHSCSSSCSSCCC---BCCSSSCCCCBCHHHHHHC-------SBCTTTCCBCCC--CCBCCC
T ss_pred CCCCCCCCcCCCCCCC---EEEecCCCHHHHHHHhhCC-------CCCccCCceecC--cEEEec
Confidence 3456789999988755 899999999 999999632 599999987643 566664
No 53
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.26 E-value=4.4e-07 Score=79.58 Aligned_cols=56 Identities=23% Similarity=0.458 Sum_probs=47.6
Q ss_pred ccccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 318 QFHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 318 ~~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
.+...|.||||.+.+.+ |+.++|||+||+.|+.++.+.+ ..+||.|+..+..+++.
T Consensus 14 ~~~~~~~C~IC~~~~~~---pv~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~~~~~ 69 (170)
T 3hcs_A 14 PLESKYECPICLMALRE---AVQTPCGHRFCKACIIKSIRDA--GHKCPVDNEILLENQLF 69 (170)
T ss_dssp CCCGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHH--CSBCTTTCCBCCGGGCE
T ss_pred CCCCCCCCCCCChhhcC---cEECCCCCHHHHHHHHHHHHhC--CCCCCCCccCcchhhhh
Confidence 35568999999999976 8999999999999999997664 34999999998877654
No 54
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.21 E-value=1.8e-07 Score=69.68 Aligned_cols=53 Identities=25% Similarity=0.593 Sum_probs=43.6
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
....+.||||.+.+.+ +.+||||+|+..|+.+|.+. ...||.|+..+...+..
T Consensus 12 ~~~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~~~~~~~~ 64 (70)
T 2ecn_A 12 LTDEEECCICMDGRAD----LILPCAHSFCQKCIDKWSDR---HRNCPICRLQMTGANES 64 (70)
T ss_dssp CCCCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSCC---CSSCHHHHHCTTCCCCC
T ss_pred CCCCCCCeeCCcCccC----cccCCCCcccHHHHHHHHHC---cCcCCCcCCcccCCCcc
Confidence 3457899999998765 89999999999999998763 57999999888765543
No 55
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.19 E-value=5.1e-07 Score=75.17 Aligned_cols=60 Identities=27% Similarity=0.625 Sum_probs=51.1
Q ss_pred ccceeccccccccCC----CCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 320 HSIFVCPVSKEQTSD----DNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~----~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
-..+.||||.+.+.+ ...++.++|||+|+..++.+|.+.. ..||.|+..+..++++++|+
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~~~~~~~~~~~~ 133 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA---NTCPTCRKKINHKRYHPIYI 133 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHC---SBCTTTCCBCCGGGEEEECC
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcC---CCCCCCCCcCChhcceeeeC
Confidence 356789999987754 2345889999999999999998774 59999999999999999986
No 56
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.13 E-value=1.5e-06 Score=70.88 Aligned_cols=54 Identities=19% Similarity=0.337 Sum_probs=40.9
Q ss_pred ceeccccccccCC------------CCCCe---eccCchhhhHHHHHHHHhcC--CCccccCCCCCcCCcc
Q 016792 322 IFVCPVSKEQTSD------------DNPPM---IMSCGHVLCRQSINKMSKNH--SRTFKCPYCPSDIDAA 375 (382)
Q Consensus 322 ~~~Cpi~~~~~~~------------~Npp~---~l~cGhv~~~~~l~~l~~~~--~~~~kCP~c~~~~~~~ 375 (382)
...||||.+.+.+ .+|-+ .+||||+|+..||.+|...+ .....||.|+..+...
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 3589999988754 22222 68999999999999998643 2357999999988643
No 57
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.11 E-value=1.2e-06 Score=64.36 Aligned_cols=53 Identities=26% Similarity=0.546 Sum_probs=42.6
Q ss_pred ceeccccccccCCCCCCeec--cCchh-hhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 322 IFVCPVSKEQTSDDNPPMIM--SCGHV-LCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l--~cGhv-~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
...|+||.+...+ ++.+ ||||+ +|.+++.++.+.+ .+||.|+..+ .++.+|||
T Consensus 8 ~~~C~IC~~~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~---~~CPiCR~~i--~~~i~i~~ 63 (64)
T 2vje_A 8 IEPCVICQGRPKN---GCIVHGKTGHLMACFTCAKKLKKRN---KPCPVCRQPI--QMIVLTYF 63 (64)
T ss_dssp GSCCTTTSSSCSC---EEEEETTEEEEEECHHHHHHHHHTT---CCCTTTCCCC--CEEEEEEC
T ss_pred cCCCCcCCCCCCC---EEEECCCCCChhhHHHHHHHHHHcC---CcCCCcCcch--hceEeeec
Confidence 4579999986654 6766 99999 8999999998653 4899999876 46777775
No 58
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.11 E-value=1.2e-06 Score=86.25 Aligned_cols=53 Identities=23% Similarity=0.639 Sum_probs=44.4
Q ss_pred eeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccccc
Q 016792 323 FVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQL 380 (382)
Q Consensus 323 ~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v 380 (382)
..||||.+...+ |+.+||||++|..|+..|.... ..+||.|+..+.......|
T Consensus 333 ~~C~ICle~~~~---pv~lpCGH~FC~~Ci~~wl~~~--~~~CP~CR~~i~~~~~i~v 385 (389)
T 2y1n_A 333 QLCKICAENDKD---VKIEPCGHLMCTSCLTSWQESE--GQGCPFCRCEIKGTEPIVV 385 (389)
T ss_dssp SBCTTTSSSBCC---EEEETTCCEECHHHHHHHHHHT--CSBCTTTCCBCCEEEECSC
T ss_pred CCCCccCcCCCC---eEEeCCCChhhHHHHHHHHhcC--CCCCCCCCCccCCceeEec
Confidence 689999988755 8999999999999999998743 4699999999887665443
No 59
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.10 E-value=1.2e-06 Score=64.23 Aligned_cols=53 Identities=21% Similarity=0.569 Sum_probs=42.0
Q ss_pred ceeccccccccCCCCCCeec--cCchh-hhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 322 IFVCPVSKEQTSDDNPPMIM--SCGHV-LCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l--~cGhv-~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
...|+||.+...+ ++++ ||||+ +|.++..++.+.+ .+||.|+..+ .++.+||+
T Consensus 7 ~~~C~IC~~~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~---~~CPiCR~~i--~~~i~i~~ 62 (63)
T 2vje_B 7 LKPCSLCEKRPRD---GNIIHGRTGHLVTCFHCARRLKKAG---ASCPICKKEI--QLVIKVFI 62 (63)
T ss_dssp GSBCTTTSSSBSC---EEEEETTEEEEEECHHHHHHHHHTT---CBCTTTCCBC--CEEEEEEE
T ss_pred CCCCcccCCcCCC---eEEEecCCCCHhHHHHHHHHHHHhC---CcCCCcCchh--hceEEEec
Confidence 4579999986654 6666 99998 9999999998654 5999999886 45667663
No 60
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.03 E-value=1.6e-06 Score=66.67 Aligned_cols=50 Identities=16% Similarity=0.445 Sum_probs=36.5
Q ss_pred ccccccccCCCCCCeecc-CchhhhHHHHHHHHhcCCCccccCCCCCcCCcccc
Q 016792 325 CPVSKEQTSDDNPPMIMS-CGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQC 377 (382)
Q Consensus 325 Cpi~~~~~~~~Npp~~l~-cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~ 377 (382)
||||.+.+..+.-++++| |||+|...||.+|.+.. ..||.|+..+...+.
T Consensus 29 C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~---~~CP~CR~~~~~~~~ 79 (81)
T 2ecl_A 29 CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN---NRCPLCQQDWVVQRI 79 (81)
T ss_dssp CTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC---CBCTTTCCBCCEEEE
T ss_pred CcccccccCCCceEEEeCCCCCccChHHHHHHHHhC---CCCCCcCCCcchhhc
Confidence 444444333445466665 99999999999998764 489999999877654
No 61
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.96 E-value=2.1e-06 Score=67.84 Aligned_cols=58 Identities=14% Similarity=0.380 Sum_probs=42.2
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHhc----CC-CccccCC--CCCc--CCcccccc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKN----HS-RTFKCPY--CPSD--IDAAQCRQ 379 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~----~~-~~~kCP~--c~~~--~~~~~~~~ 379 (382)
.+.||||.+.....+...+.+|||.||++|+...... +. ..++||. |+.. ...++++.
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~ 71 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIEC 71 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHH
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHH
Confidence 5789999998765221122389999999999998653 21 3589999 9998 76666554
No 62
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=97.93 E-value=2.4e-06 Score=65.54 Aligned_cols=50 Identities=24% Similarity=0.683 Sum_probs=39.4
Q ss_pred ccceeccccccccCCCCCCeeccCchh-hhHHHHHHHHhcCCCccccCCCCCcCCcccccccc
Q 016792 320 HSIFVCPVSKEQTSDDNPPMIMSCGHV-LCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLY 381 (382)
Q Consensus 320 hS~~~Cpi~~~~~~~~Npp~~l~cGhv-~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~ 381 (382)
.....|+||.+...+ |+.+||||+ +|..|+.++ .+||.|+..+.. ..+||
T Consensus 16 ~~~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~~-------~~CP~Cr~~i~~--~~~i~ 66 (79)
T 2yho_A 16 KEAMLCMVCCEEEIN---STFCPCGHTVCCESCAAQL-------QSCPVCRSRVEH--VQHVY 66 (79)
T ss_dssp HHHTBCTTTSSSBCC---EEEETTCBCCBCHHHHTTC-------SBCTTTCCBCCE--EEECB
T ss_pred CCCCEeEEeCcccCc---EEEECCCCHHHHHHHHHhc-------CcCCCCCchhhC--eEEEE
Confidence 345689999987755 899999999 999999754 399999987654 34454
No 63
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=97.85 E-value=9.4e-06 Score=65.82 Aligned_cols=51 Identities=16% Similarity=0.328 Sum_probs=39.4
Q ss_pred eccccccccCC---------------CCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccc
Q 016792 324 VCPVSKEQTSD---------------DNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQC 377 (382)
Q Consensus 324 ~Cpi~~~~~~~---------------~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~ 377 (382)
.|+||.+.+.+ +.+.+.+||||+|...||.+|.+. ...||.|+.++...+.
T Consensus 39 ~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~---~~~CP~Cr~~~~~~~~ 104 (106)
T 3dpl_R 39 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT---RQVCPLDNREWEFQKY 104 (106)
T ss_dssp CCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT---CSBCSSSCSBCCEEEC
T ss_pred CCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHc---CCcCcCCCCcceeecC
Confidence 57777666543 334567899999999999999865 3689999999876654
No 64
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.70 E-value=1.4e-05 Score=59.45 Aligned_cols=43 Identities=23% Similarity=0.554 Sum_probs=35.4
Q ss_pred ceeccccccccCCCCCCeeccCchh-hhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHV-LCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv-~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
...|+||.+...+ ++.+||||+ +|..++.. ..+||+|+..+..
T Consensus 15 ~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~-------~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 15 SKDCVVCQNGTVN---WVLLPCRHTCLCDGCVKY-------FQQCPMCRQFVQE 58 (68)
T ss_dssp SSCCSSSSSSCCC---CEETTTTBCCSCTTHHHH-------CSSCTTTCCCCCC
T ss_pred CCCCCCcCcCCCC---EEEECCCChhhhHHHHhc-------CCCCCCCCcchhc
Confidence 5689999887654 899999999 99999983 2589999987653
No 65
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.63 E-value=2.6e-05 Score=59.91 Aligned_cols=53 Identities=19% Similarity=0.454 Sum_probs=44.1
Q ss_pred ceeccccccccCCCCCCeeccCc-----hhhhHHHHHHHHhcCCCccccCCCCCcCCccc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCG-----HVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cG-----hv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~ 376 (382)
.-.|+||.+..++++ |+.+||+ |.|-.+||.+|....+ ...||.|+..+.+..
T Consensus 15 ~~~C~IC~~~~~~~~-~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~-~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 15 QDICRICHCEGDDES-PLITPCHCTGSLHFVHQACLQQWIKSSD-TRCCELCKYEFIMET 72 (80)
T ss_dssp SCCCSSSCCCCCSSS-CEECSSSCCSSSCCEETTHHHHHHHHHC-CSBCSSSCCBCCCCC
T ss_pred CCCCeEcCccccCCC-eeEeccccCCcCCeeCHHHHHHHHhhCC-CCCCCCCCCeeecCc
Confidence 348999999888777 5789996 9999999999977642 469999999998754
No 66
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=97.62 E-value=7.7e-06 Score=79.80 Aligned_cols=52 Identities=21% Similarity=0.612 Sum_probs=41.4
Q ss_pred cccceeccccccccCCCCCCeeccCchh-hhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHV-LCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv-~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
+...+.||||.+...+ |+.+||||+ +|..|+.++ .+||.|+..+. ...+||+
T Consensus 292 l~~~~~C~IC~~~~~~---~v~lpCgH~~fC~~C~~~~-------~~CP~CR~~i~--~~~~i~~ 344 (345)
T 3t6p_A 292 LQEERTCKVCMDKEVS---VVFIPCGHLVVCQECAPSL-------RKCPICRGIIK--GTVRTFL 344 (345)
T ss_dssp HHTTCBCTTTSSSBCC---EEEETTCCEEECTTTGGGC-------SBCTTTCCBCC--EEEECC-
T ss_pred CcCCCCCCccCCcCCc---eEEcCCCChhHhHHHHhcC-------CcCCCCCCCcc--CeEEeec
Confidence 3446899999998876 999999999 999999865 58999998765 3455553
No 67
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=97.47 E-value=1.7e-05 Score=65.46 Aligned_cols=50 Identities=16% Similarity=0.337 Sum_probs=0.0
Q ss_pred eccccccccCC---------------CCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccc
Q 016792 324 VCPVSKEQTSD---------------DNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 324 ~Cpi~~~~~~~---------------~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~ 376 (382)
.|+||.+.+.+ +-+.+.+||||+|...||.+|.+. ...||.|+..+.+..
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~---~~~CP~Cr~~~~~~k 114 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT---RQVCPLDNREWEFQK 114 (117)
T ss_dssp --------------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc---CCcCCCCCCeeeeec
Confidence 68888776643 224455799999999999999766 358999999887654
No 68
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=96.42 E-value=0.0017 Score=70.28 Aligned_cols=52 Identities=15% Similarity=0.234 Sum_probs=44.9
Q ss_pred cceeccccccccCCCCCCeeccCc-hhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 321 SIFVCPVSKEQTSDDNPPMIMSCG-HVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~Npp~~l~cG-hv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
+-|.|||+++.|.| ||++|.| ++|.+.+|++|...+ .+||.++...+.+++.
T Consensus 890 ~~F~cPIs~~lM~D---PVilpsG~~TydR~~I~~wl~~~---~tdP~Tr~~L~~~~li 942 (968)
T 3m62_A 890 DEFLDPLMYTIMKD---PVILPASKMNIDRSTIKAHLLSD---STDPFNRMPLKLEDVT 942 (968)
T ss_dssp GGGBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHTTC---CBCTTTCCBCCGGGCE
T ss_pred HHhCCcchhhHHhC---CeEcCCCCEEECHHHHHHHHhcC---CCCCCCCCCCCccccc
Confidence 37899999999999 9999998 699999999998653 3899999988876653
No 69
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=96.15 E-value=0.0031 Score=49.90 Aligned_cols=47 Identities=19% Similarity=0.388 Sum_probs=36.5
Q ss_pred eccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 324 VCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 324 ~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
.|+.|.-.... -..|+||+||+|.+|...+.+++ .-.||.|...+..
T Consensus 3 fC~~C~~Pi~i--ygRmIPCkHvFCydCa~~~~~~~--~k~Cp~C~~~V~r 49 (101)
T 3vk6_A 3 FCDKCGLPIKV--YGRMIPCKHVFCYDCAILHEKKG--DKMCPGCSDPVQR 49 (101)
T ss_dssp BCTTTCSBCSE--EEEEETTCCEEEHHHHHHHHHTT--CCBCTTTCCBCSE
T ss_pred ecCccCCCeEE--EeeeccccccHHHHHHHHHHhcc--CCCCcCcCCeeee
Confidence 57777765543 24679999999999999998775 3589999887653
No 70
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=95.64 E-value=0.0077 Score=43.30 Aligned_cols=49 Identities=16% Similarity=0.336 Sum_probs=37.6
Q ss_pred ceeccccccccCCCCCCeeccCch-----hhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGH-----VLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGh-----v~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
.-.|.||.+.. ++|+.+||.+ .+-..+|.+|...++ ...||.|+..|.+
T Consensus 6 ~~~CrIC~~~~---~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~-~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 6 VPVCWICNEEL---GNERFRACGCTGELENVHRSCLSTWLTISR-NTACQICGVVYNT 59 (60)
T ss_dssp CCEETTTTEEC---SCCCCCSCCCSSGGGSCCHHHHHHHHHHHT-CSBCTTTCCBCCC
T ss_pred CCEeEEeecCC---CCceecCcCCCCchhhhHHHHHHHHHHhCC-CCccCCCCCeeec
Confidence 34799998863 2367899764 889999999976432 4699999998865
No 71
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.66 E-value=0.023 Score=55.34 Aligned_cols=53 Identities=23% Similarity=0.453 Sum_probs=43.6
Q ss_pred ceeccccccccCCCCCCee-ccCchh--hhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 322 IFVCPVSKEQTSDDNPPMI-MSCGHV--LCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~-l~cGhv--~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
-+.||+++..+.. |+. ..|.|+ |...++..+.... +..+||.|.+....++++
T Consensus 249 SL~CPlS~~ri~~---PvRg~~C~HlQCFDl~sfL~~~~~~-~~W~CPIC~k~~~~~dL~ 304 (371)
T 3i2d_A 249 SLQCPISYTRMKY---PSKSINCKHLQCFDALWFLHSQLQI-PTWQCPVCQIDIALENLA 304 (371)
T ss_dssp ESBCTTTSSBCSS---EEEETTCCSSCCEEHHHHHHHHHHS-CCCBCTTTCCBCCGGGEE
T ss_pred eecCCCccccccc---cCcCCcCCCcceECHHHHHHHhhcC-CceeCCCCCcccCHHHee
Confidence 3799999999976 666 899998 8888888887664 479999999999887754
No 72
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=94.01 E-value=0.038 Score=53.62 Aligned_cols=53 Identities=21% Similarity=0.471 Sum_probs=44.1
Q ss_pred ceeccccccccCCCCCCee-ccCchh--hhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 322 IFVCPVSKEQTSDDNPPMI-MSCGHV--LCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~-l~cGhv--~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
.+.||+++..+.. |+. ..|.|+ |...++-.+.... ++.+||.|.+....++++
T Consensus 215 SL~CPlS~~ri~~---P~Rg~~C~HlqCFDl~sfL~~~~~~-~~W~CPiC~k~~~~~dL~ 270 (360)
T 4fo9_A 215 SLMCPLGKMRLTI---PCRAVTCTHLQCFDAALYLQMNEKK-PTWICPVCDKKAAYESLI 270 (360)
T ss_dssp ESBCTTTCSBCSS---EEEETTCCCCCCEEHHHHHHHHHHS-CCCBCTTTCSBCCGGGEE
T ss_pred eeeCCCccceecc---CCcCCCCCCCccCCHHHHHHHHhhC-CCeECCCCCcccCHHHeE
Confidence 4589999999966 665 899999 8888888887764 479999999999887754
No 73
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.99 E-value=0.035 Score=41.64 Aligned_cols=51 Identities=14% Similarity=0.348 Sum_probs=39.1
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~ 375 (382)
+-.|.||++...... ....|||.|-..||.+|.+... .-+||.|+......
T Consensus 15 i~~C~IC~~~i~~g~--~C~~C~h~fH~~Ci~kWl~~~~-~~~CP~Cr~~w~~~ 65 (74)
T 2ct0_A 15 VKICNICHSLLIQGQ--SCETCGIRMHLPCVAKYFQSNA-EPRCPHCNDYWPHE 65 (74)
T ss_dssp SCBCSSSCCBCSSSE--ECSSSCCEECHHHHHHHSTTCS-SCCCTTTCSCCCSC
T ss_pred CCcCcchhhHcccCC--ccCCCCchhhHHHHHHHHHhcC-CCCCCCCcCcCCCC
Confidence 568999999886421 2249999999999999986542 36999999887643
No 74
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=92.99 E-value=0.0037 Score=42.21 Aligned_cols=29 Identities=21% Similarity=0.574 Sum_probs=21.1
Q ss_pred eeccCchhhhHHHHHHHHhcCCCccccCCCCCcC
Q 016792 339 MIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDI 372 (382)
Q Consensus 339 ~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~ 372 (382)
+.+-||++++.+-|+.| ..++||||+-..
T Consensus 5 ~C~rCg~~fs~~el~~l-----P~IrCpyCGyri 33 (48)
T 4ayb_P 5 RCGKCWKTFTDEQLKVL-----PGVRCPYCGYKI 33 (48)
T ss_dssp CCCCTTTTCCCCCSCCC-----SSSCCTTTCCSC
T ss_pred EeeccCCCccHHHHhhC-----CCcccCccCcEE
Confidence 45789999887766544 258999998643
No 75
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=92.28 E-value=0.26 Score=37.98 Aligned_cols=32 Identities=19% Similarity=0.188 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHhCCCc
Q 016792 107 THTVSQIIASHFYRQGLFEVGDCFISETKESE 138 (382)
Q Consensus 107 ~~~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~ 138 (382)
++.+|+.|++||..+|+-++++.|.+|.++..
T Consensus 10 ~eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~ 41 (88)
T 1uuj_A 10 RDELNRAIADYLRSNGYEEAYSVFKKEAELDM 41 (88)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999998875
No 76
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=91.98 E-value=0.049 Score=52.59 Aligned_cols=54 Identities=15% Similarity=0.324 Sum_probs=38.4
Q ss_pred ceeccccccccCC-CCCC-e---eccCchhhhHHHHHHHHhcC--C------CccccCCCCCcCCcc
Q 016792 322 IFVCPVSKEQTSD-DNPP-M---IMSCGHVLCRQSINKMSKNH--S------RTFKCPYCPSDIDAA 375 (382)
Q Consensus 322 ~~~Cpi~~~~~~~-~Npp-~---~l~cGhv~~~~~l~~l~~~~--~------~~~kCP~c~~~~~~~ 375 (382)
.-.|+||-+...+ .--| . ..+|||.|-..||.+|.+.. + -...||||+...+.+
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~s 374 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLSTS 374 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEGG
T ss_pred CccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCcc
Confidence 4579999887765 2223 1 25899999999999997642 1 125899999876643
No 77
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=91.24 E-value=0.049 Score=41.13 Aligned_cols=55 Identities=18% Similarity=0.411 Sum_probs=27.2
Q ss_pred cccccceeccccccccCCC---CCCeeccCchhhh--HHHHHHHHhcCCCccccCCCCCcCC
Q 016792 317 FQFHSIFVCPVSKEQTSDD---NPPMIMSCGHVLC--RQSINKMSKNHSRTFKCPYCPSDID 373 (382)
Q Consensus 317 ~~~hS~~~Cpi~~~~~~~~---Npp~~l~cGhv~~--~~~l~~l~~~~~~~~kCP~c~~~~~ 373 (382)
||.|-.--|||||+..+=+ +.-+.+.++.-+= ++...+-...- .||||.|+.+|-
T Consensus 3 ~~~~~~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F--~FkCP~CgEEFy 62 (95)
T 2k5c_A 3 HHHHHMAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEF--VFKCPVCGEEFY 62 (95)
T ss_dssp -----CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHS--EEECTTTCCEEE
T ss_pred ccccccccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHH--hhcCCCccHHHh
Confidence 4567788999999754310 0011134443332 33333222222 699999999874
No 78
>2nxp_A Transcription initiation factor TFIID subunit 5; transcription factor, TAF5; 2.17A {Homo sapiens} SCOP: d.379.1.1
Probab=85.27 E-value=1.5 Score=37.33 Aligned_cols=65 Identities=12% Similarity=0.091 Sum_probs=53.2
Q ss_pred HHHHHHhcchHhhhcCCchhhhchHHHHHHHHHcCCHHHHHHHHHHhcCCchhhhHHHHHHHHHh
Q 016792 165 ALKWAAANSDKLTQNGSDLQLKLHSLQFVEILRKGSREEALKYARANLAPFASNHVNEIQKLMAC 229 (382)
Q Consensus 165 Al~W~~~n~~~L~~~~s~LeF~L~~q~fIeLl~~~~~~eAl~yar~~l~~f~~~~~~eiq~lm~~ 229 (382)
-..|+...-+..+..=+.+-|=+-..-|++|+.+|...+|-.+..++-+-|...|.++|+++.+.
T Consensus 34 L~~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~~~~~~~i~~L~~i 98 (156)
T 2nxp_A 34 LKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSL 98 (156)
T ss_dssp HHHHHHTSCHHHHHHHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGSCGGGHHHHHHHHTC
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHhHHhHHHHHHHHHHHhcC
Confidence 35788876544444346789999999999999999999999999988887878899999999653
No 79
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=83.89 E-value=1.4 Score=34.06 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=31.2
Q ss_pred CCHHHHHHHHHHHHHHhCcHHHHHHHHHHhCCCc
Q 016792 105 FDTHTVSQIIASHFYRQGLFEVGDCFISETKESE 138 (382)
Q Consensus 105 ~~~~~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~ 138 (382)
+..+++|.+|--||...||..+|-+|.+|+++..
T Consensus 3 itsdevN~LI~RYLqEsGf~hsAf~f~~Es~i~~ 36 (90)
T 2xtc_A 3 ITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQ 36 (90)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHTTGGG
T ss_pred CcHHHHHHHHHHHHHHcCCHHHHHHHHHHhcCCc
Confidence 5678999999999999999999999999998764
No 80
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=83.62 E-value=5.3 Score=30.25 Aligned_cols=53 Identities=11% Similarity=0.215 Sum_probs=31.6
Q ss_pred HHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHhhhhhhhhH
Q 016792 10 FDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQDIAPLGQLE 71 (382)
Q Consensus 10 ~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 71 (382)
+|.|..+|... ++.+-+.|+.|.+.|.. +| +....|+++|.++.++..+..++
T Consensus 12 Ld~v~~~f~~g-------a~~~~~~v~~Ai~~L~~-~P-snPa~LAeyQ~kl~eysl~rNaq 64 (85)
T 2ca5_A 12 LSSLSETFDDG-------TQTLQGELTLALDKLAK-NP-SNPQLLAEYQSKLSEYTLYRNAQ 64 (85)
T ss_dssp --------CCH-------HHHHHHHHHHHHHHHHH-CT-TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHHc-CC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 56666665553 34455677788888887 66 44578999999999886655444
No 81
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=81.53 E-value=1.2 Score=40.73 Aligned_cols=50 Identities=14% Similarity=0.337 Sum_probs=38.1
Q ss_pred ceeccccccccCCCCCCee-ccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcc
Q 016792 322 IFVCPVSKEQTSDDNPPMI-MSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~-l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~ 375 (382)
+-.|.+|++..+.. .. -.|||.+-..|+.++.+.. +..+||.|+......
T Consensus 180 i~~C~iC~~iv~~g---~~C~~C~~~~H~~C~~~~~~~~-~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 180 VKICNICHSLLIQG---QSCETCGIRMHLPCVAKYFQSN-AEPRCPHCNDYWPHE 230 (238)
T ss_dssp CCBCTTTCSBCSSC---EECSSSCCEECHHHHHHHTTTC-SSCBCTTTCCBCCSC
T ss_pred CCcCcchhhHHhCC---cccCccChHHHHHHHHHHHHhC-CCCCCCCCCCCCCCC
Confidence 66899999887742 22 2399999999999998653 257999999876544
No 82
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=78.40 E-value=2.3 Score=32.64 Aligned_cols=50 Identities=20% Similarity=0.443 Sum_probs=39.1
Q ss_pred ceecccccccc--CCC-CCCee-ccCchhhhHHHHHHHHhcCCCccccCCCCCcCC
Q 016792 322 IFVCPVSKEQT--SDD-NPPMI-MSCGHVLCRQSINKMSKNHSRTFKCPYCPSDID 373 (382)
Q Consensus 322 ~~~Cpi~~~~~--~~~-Npp~~-l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~ 373 (382)
.=+|-||++.. +++ ++.+. --||.-+|+.|.+--.+.+ .--||.|+..|.
T Consensus 16 ~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG--~q~CpqCktrYk 69 (93)
T 1weo_A 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREG--TQNCPQCKTRYK 69 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTS--CSSCTTTCCCCC
T ss_pred CCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhcc--CccccccCCccc
Confidence 45899999973 333 33343 5899999999999888776 569999999996
No 83
>2j49_A Transcription initiation factor TFIID subunit 5; nuclear protein, transcription regulation, TA TFIID, WD repeat; 2.3A {Saccharomyces cerevisiae} SCOP: d.379.1.1
Probab=77.96 E-value=1.3 Score=37.40 Aligned_cols=63 Identities=16% Similarity=0.238 Sum_probs=48.7
Q ss_pred HHHHHHhcchHhhhcCCchhhhchHHHHHHHHHcCCHHHHHHHHHHhcCCchhhhHHHHHHHHH
Q 016792 165 ALKWAAANSDKLTQNGSDLQLKLHSLQFVEILRKGSREEALKYARANLAPFASNHVNEIQKLMA 228 (382)
Q Consensus 165 Al~W~~~n~~~L~~~~s~LeF~L~~q~fIeLl~~~~~~eAl~yar~~l~~f~~~~~~eiq~lm~ 228 (382)
-.+|++.+-+..+..=+.+-|=+...-|++|+.+| ..+|-.+..++-+-|...|.++|+++.+
T Consensus 17 Lr~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g-~~~A~~F~~~f~~~~~~~~~~~i~~L~~ 79 (148)
T 2j49_A 17 LKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKN-PVYARRFFDRFSPDFKDFHGSEINRLFS 79 (148)
T ss_dssp HHHHHHTSCTTTHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHGGGGHHHHHHHHHTTTT
T ss_pred HHHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHhHHhHHHHHHHHHHHhc
Confidence 35788776433232224688999999999999999 9999999998877777778888888855
No 84
>2j4b_A TAF5, transcription initiation factor TFIID subunit 72/ kDa; WD repeat; 2.5A {Encephalitozoon cuniculi} SCOP: d.379.1.1
Probab=76.73 E-value=3.4 Score=34.36 Aligned_cols=64 Identities=13% Similarity=0.232 Sum_probs=48.3
Q ss_pred HHHHHHHhcchHhhhcCCchhhhchHHHHHHHHHcCCHHHHHHHHHHhcCCchhhhHHHHHHHHH
Q 016792 164 PALKWAAANSDKLTQNGSDLQLKLHSLQFVEILRKGSREEALKYARANLAPFASNHVNEIQKLMA 228 (382)
Q Consensus 164 ~Al~W~~~n~~~L~~~~s~LeF~L~~q~fIeLl~~~~~~eAl~yar~~l~~f~~~~~~eiq~lm~ 228 (382)
.-.+|++..-+..+..=+.+-|=+-..-|++|+.+|...+|-.+..++-+-|... .++|+++.+
T Consensus 14 ~L~~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~~~-~~~i~~L~~ 77 (138)
T 2j4b_A 14 SLKTWIEDSLDLFKNDLLPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDHYNK-SEEIKQFES 77 (138)
T ss_dssp HHHHHHHHSCHHHHHHHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC--C-HHHHHHHTT
T ss_pred HHHHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHhHHHhhH-HHHHHHHhc
Confidence 3457888865444433457899999999999999999999999999877767665 778888754
No 85
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=75.98 E-value=1.2 Score=34.45 Aligned_cols=31 Identities=10% Similarity=0.458 Sum_probs=25.3
Q ss_pred eeccccccccCCCCCCee--ccCchhhhHHHHHHH
Q 016792 323 FVCPVSKEQTSDDNPPMI--MSCGHVLCRQSINKM 355 (382)
Q Consensus 323 ~~Cpi~~~~~~~~Npp~~--l~cGhv~~~~~l~~l 355 (382)
+.|+||.+.. .++|+. ++|||.||+.++...
T Consensus 4 ~~C~~C~~~~--~~~av~~C~~C~~~~C~~Cl~~~ 36 (101)
T 2jun_A 4 VLCQFCDQDP--AQDAVKTCVTCEVSYCDECLKAT 36 (101)
T ss_dssp CBCTTCCSSS--CCBCCEEETTTTEEECHHHHHHH
T ss_pred CCCcCCCCCC--CCCceEECCcCChHHhHHHCHHH
Confidence 5799998642 345888 999999999999984
No 86
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=73.78 E-value=2.2 Score=32.19 Aligned_cols=41 Identities=22% Similarity=0.597 Sum_probs=26.7
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHhc--CCCccccCCCCCcCCccc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKN--HSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~--~~~~~kCP~c~~~~~~~~ 376 (382)
.++||+|+..+.. +..|.+=.+. +...|+|++|++.|....
T Consensus 28 ~h~C~~Cgk~F~~--------------~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~ 70 (85)
T 2lv2_A 28 CHLCPVCGESFAS--------------KGAQERHLRLLHAAQVFPCKYCPATFYSSP 70 (85)
T ss_dssp TEECTTSCCEESS--------------HHHHHHHHHTTSCSSSEECTTSSCEESSHH
T ss_pred CEECCCCCCCcCc--------------HHHHhhhhhhccCCCccCCCCCCCEeCCHH
Confidence 3578888876643 3444443322 234799999999987654
No 87
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=72.61 E-value=1.2 Score=35.33 Aligned_cols=28 Identities=29% Similarity=0.627 Sum_probs=20.3
Q ss_pred CCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcC
Q 016792 337 PPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDI 372 (382)
Q Consensus 337 pp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~ 372 (382)
||....||++|. +..+...+||.|+.+.
T Consensus 67 p~~C~~CG~~F~--------~~~~kPsrCP~CkSe~ 94 (105)
T 2gmg_A 67 PAQCRKCGFVFK--------AEINIPSRCPKCKSEW 94 (105)
T ss_dssp CCBBTTTCCBCC--------CCSSCCSSCSSSCCCC
T ss_pred CcChhhCcCeec--------ccCCCCCCCcCCCCCc
Confidence 578899999991 1223357999998764
No 88
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=71.19 E-value=0.86 Score=33.37 Aligned_cols=37 Identities=19% Similarity=0.288 Sum_probs=24.8
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQC 377 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~ 377 (382)
.-.+++||+|+.....+. ..+...||.|+..|.+.+=
T Consensus 5 LL~iL~CP~ck~~L~~~~----------------------~~~~LiC~~cg~~YPI~dG 41 (68)
T 2jr6_A 5 FLDILVCPVTKGRLEYHQ----------------------DKQELWSRQAKLAYPIKDG 41 (68)
T ss_dssp SSCCCBCSSSCCBCEEET----------------------TTTEEEETTTTEEEEEETT
T ss_pred HhhheECCCCCCcCeEeC----------------------CCCEEEcCCCCcEecCCCC
Confidence 456899999997443211 1136889999888876653
No 89
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=70.36 E-value=1.7 Score=30.10 Aligned_cols=16 Identities=25% Similarity=1.034 Sum_probs=13.2
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|...+
T Consensus 38 k~~~C~~C~k~f~~~~ 53 (62)
T 1vd4_A 38 GTFRCTFCHTEVEEDE 53 (62)
T ss_dssp TEEBCSSSCCBCEECT
T ss_pred CCEECCCCCCccccCc
Confidence 4699999999987654
No 90
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=69.07 E-value=1.6 Score=26.15 Aligned_cols=14 Identities=43% Similarity=0.717 Sum_probs=11.3
Q ss_pred cceeccccccccCC
Q 016792 321 SIFVCPVSKEQTSD 334 (382)
Q Consensus 321 S~~~Cpi~~~~~~~ 334 (382)
+.|.||||+.++-+
T Consensus 2 ~k~~CpvCk~q~Pd 15 (28)
T 2jvx_A 2 SDFCCPKCQYQAPD 15 (28)
T ss_dssp CCEECTTSSCEESS
T ss_pred CcccCccccccCcC
Confidence 47899999988765
No 91
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=68.85 E-value=0.91 Score=33.24 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=24.8
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQC 377 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~ 377 (382)
.-.+++||+|+.....+. ..+...||.|+..|.+.+=
T Consensus 5 LL~iL~CP~ck~~L~~~~----------------------~~~~LiC~~cg~~YPI~dG 41 (68)
T 2hf1_A 5 FLEILVCPLCKGPLVFDK----------------------SKDELICKGDRLAFPIKDG 41 (68)
T ss_dssp CEEECBCTTTCCBCEEET----------------------TTTEEEETTTTEEEEEETT
T ss_pred HhhheECCCCCCcCeEeC----------------------CCCEEEcCCCCcEecCCCC
Confidence 446899999997443211 1236889999888876653
No 92
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=68.55 E-value=3.4 Score=29.44 Aligned_cols=17 Identities=18% Similarity=0.561 Sum_probs=12.9
Q ss_pred CCccccCCCCCcCCccc
Q 016792 360 SRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 360 ~~~~kCP~c~~~~~~~~ 376 (382)
...++|+.|+..|....
T Consensus 55 ~~~~~C~~C~~~f~~~~ 71 (82)
T 2kmk_A 55 EKPHKCQVCGKAFSQSS 71 (82)
T ss_dssp CCCEECTTTSCEESSHH
T ss_pred CCCCcCCCcchhhCChH
Confidence 34699999999886543
No 93
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=68.02 E-value=1.1 Score=33.10 Aligned_cols=19 Identities=26% Similarity=0.581 Sum_probs=14.2
Q ss_pred CccccCCCCCcCCccccccc
Q 016792 361 RTFKCPYCPSDIDAAQCRQL 380 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~~~~v 380 (382)
.+-+|| |+..+..+.++.+
T Consensus 20 kT~~C~-CG~~~~~~k~rif 38 (71)
T 1gh9_A 20 KTRKCV-CGRTVNVKDRRIF 38 (71)
T ss_dssp SEEEET-TTEEEECCSSSCB
T ss_pred cEEECC-CCCeeeeceEEEE
Confidence 367888 8888888777654
No 94
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=67.91 E-value=4.3 Score=29.47 Aligned_cols=34 Identities=21% Similarity=0.621 Sum_probs=20.9
Q ss_pred CchhhhHH-HHHHHHh--cCCCccccCCCCCcCCccc
Q 016792 343 CGHVLCRQ-SINKMSK--NHSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 343 cGhv~~~~-~l~~l~~--~~~~~~kCP~c~~~~~~~~ 376 (382)
||-.+... .|..-.. .+...++||.|++.|....
T Consensus 43 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~ 79 (89)
T 2wbs_A 43 CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSD 79 (89)
T ss_dssp TCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHH
T ss_pred CCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHH
Confidence 77777543 3333211 2334699999999887543
No 95
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=67.78 E-value=1 Score=33.22 Aligned_cols=37 Identities=19% Similarity=0.287 Sum_probs=24.8
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQC 377 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~ 377 (382)
.-.+++||+|+.....+. ..+...||.|+..|.+.+=
T Consensus 5 LL~iL~CP~ck~~L~~~~----------------------~~~~LiC~~cg~~YPI~dG 41 (70)
T 2js4_A 5 LLDILVCPVCKGRLEFQR----------------------AQAELVCNADRLAFPVRDG 41 (70)
T ss_dssp CCCCCBCTTTCCBEEEET----------------------TTTEEEETTTTEEEEEETT
T ss_pred HhhheECCCCCCcCEEeC----------------------CCCEEEcCCCCceecCCCC
Confidence 456899999998443210 1236889999888876653
No 96
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=67.74 E-value=5.1 Score=26.41 Aligned_cols=17 Identities=18% Similarity=0.677 Sum_probs=13.2
Q ss_pred CCccccCCCCCcCCccc
Q 016792 360 SRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 360 ~~~~kCP~c~~~~~~~~ 376 (382)
...++||+|+..|....
T Consensus 30 ~~~~~C~~C~~~f~~~~ 46 (57)
T 3uk3_C 30 EKPYKCEFCEYAAAQKT 46 (57)
T ss_dssp CCCEECSSSSCEESSHH
T ss_pred CCCcCCCCCcchhCCHH
Confidence 34699999999887543
No 97
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=67.66 E-value=1.1 Score=32.68 Aligned_cols=38 Identities=11% Similarity=0.084 Sum_probs=25.3
Q ss_pred ccccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccc
Q 016792 318 QFHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQC 377 (382)
Q Consensus 318 ~~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~ 377 (382)
..-.+++||+|+.....+. ..+...||.|+..|...+=
T Consensus 6 ~LLeiL~CP~ck~~L~~~~----------------------~~g~LvC~~c~~~YPI~dG 43 (67)
T 2jny_A 6 QLLEVLACPKDKGPLRYLE----------------------SEQLLVNERLNLAYRIDDG 43 (67)
T ss_dssp GGTCCCBCTTTCCBCEEET----------------------TTTEEEETTTTEEEEEETT
T ss_pred HHHHHhCCCCCCCcCeEeC----------------------CCCEEEcCCCCccccCCCC
Confidence 4557999999998443210 1236789998888776553
No 98
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=66.38 E-value=1.4 Score=32.34 Aligned_cols=37 Identities=11% Similarity=0.132 Sum_probs=24.5
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQC 377 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~ 377 (382)
.-.+++||+|+.....+. ..+...||.|+..|...+=
T Consensus 5 LLeiL~CP~ck~~L~~~~----------------------~~~~LiC~~cg~~YPI~dG 41 (69)
T 2pk7_A 5 LLDILACPICKGPLKLSA----------------------DKTELISKGAGLAYPIRDG 41 (69)
T ss_dssp GGGTCCCTTTCCCCEECT----------------------TSSEEEETTTTEEEEEETT
T ss_pred HHhheeCCCCCCcCeEeC----------------------CCCEEEcCCCCcEecCcCC
Confidence 456899999997443211 0136889999888876653
No 99
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=65.75 E-value=32 Score=26.51 Aligned_cols=50 Identities=20% Similarity=0.050 Sum_probs=32.9
Q ss_pred HHhhhhhchhhhHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHh
Q 016792 13 VAKKQKLSCSKTQEVIDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQD 63 (382)
Q Consensus 13 ~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 63 (382)
.+.+. +..++.-+...++..++.+.+.++++.+..|.=.--++|.+++.+
T Consensus 11 wi~~l-~~~s~~a~~~~~lk~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DK 60 (93)
T 3sjb_C 11 WISKF-APGNELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDS 60 (93)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHTTSCTTTCHHHHHHHHHHHHH
T ss_pred HHHHH-ccCcHhHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 33443 333667777888889999999999887777776667778887765
No 100
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=65.58 E-value=5 Score=27.44 Aligned_cols=16 Identities=19% Similarity=0.891 Sum_probs=13.0
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++||+|++.|....
T Consensus 39 ~~~~C~~C~k~f~~~~ 54 (66)
T 2drp_A 39 KVYPCPFCFKEFTRKD 54 (66)
T ss_dssp CCEECTTTCCEESCHH
T ss_pred cCeECCCCCCccCCHH
Confidence 4799999999987643
No 101
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=65.04 E-value=1.4 Score=30.93 Aligned_cols=15 Identities=20% Similarity=0.530 Sum_probs=11.8
Q ss_pred ccccceecccccccc
Q 016792 318 QFHSIFVCPVSKEQT 332 (382)
Q Consensus 318 ~~hS~~~Cpi~~~~~ 332 (382)
..-.+++||+|+...
T Consensus 6 ~lL~iL~CP~c~~~L 20 (56)
T 2kpi_A 6 GLLEILACPACHAPL 20 (56)
T ss_dssp SCTTSCCCSSSCSCE
T ss_pred HHHhheeCCCCCCcc
Confidence 456799999999844
No 102
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=64.52 E-value=2.4 Score=37.64 Aligned_cols=16 Identities=13% Similarity=0.326 Sum_probs=11.2
Q ss_pred ceeccccccccCCCCCC
Q 016792 322 IFVCPVSKEQTSDDNPP 338 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp 338 (382)
.++|++||-..+. ++|
T Consensus 171 ~~~C~~CG~i~~g-~~p 186 (202)
T 1yuz_A 171 FHLCPICGYIHKG-EDF 186 (202)
T ss_dssp EEECSSSCCEEES-SCC
T ss_pred EEEECCCCCEEcC-cCC
Confidence 6889888877654 444
No 103
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=64.36 E-value=5.6 Score=27.74 Aligned_cols=17 Identities=24% Similarity=0.460 Sum_probs=13.6
Q ss_pred CCccccCCCCCcCCccc
Q 016792 360 SRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 360 ~~~~kCP~c~~~~~~~~ 376 (382)
...++|+.|++.|....
T Consensus 30 ekp~~C~~C~k~F~~~~ 46 (60)
T 4gzn_C 30 YRPRSCPECGKCFRDQS 46 (60)
T ss_dssp CCCEECTTTCCEESSHH
T ss_pred CcCeECCCCCCCcCCHH
Confidence 35799999999987654
No 104
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=62.92 E-value=8 Score=28.63 Aligned_cols=35 Identities=14% Similarity=0.541 Sum_probs=21.4
Q ss_pred cCchhhhHHH-HHHHHh--cCCCccccCCCCCcCCccc
Q 016792 342 SCGHVLCRQS-INKMSK--NHSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 342 ~cGhv~~~~~-l~~l~~--~~~~~~kCP~c~~~~~~~~ 376 (382)
.||..+.... |..-.. .+...++|++|++.|....
T Consensus 52 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~ 89 (100)
T 2ebt_A 52 GCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSD 89 (100)
T ss_dssp SCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHH
T ss_pred CCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHH
Confidence 3787775543 333211 1234699999999887543
No 105
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=62.38 E-value=7.2 Score=25.98 Aligned_cols=16 Identities=13% Similarity=0.584 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++||+|++.|....
T Consensus 29 ~~~~C~~C~~~f~~~~ 44 (60)
T 2adr_A 29 KPYPCGLCNRAFTRRD 44 (60)
T ss_dssp CSEECTTTCCEESSHH
T ss_pred CCccCCCCCCccCCHH
Confidence 4699999999887543
No 106
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=62.15 E-value=8.3 Score=29.70 Aligned_cols=54 Identities=15% Similarity=0.288 Sum_probs=32.1
Q ss_pred ceeccccccccC----------------CCCCCeeccCchhhhHHH-HHHHHh-c-CCCccccCCCCCcCCcc
Q 016792 322 IFVCPVSKEQTS----------------DDNPPMIMSCGHVLCRQS-INKMSK-N-HSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 322 ~~~Cpi~~~~~~----------------~~Npp~~l~cGhv~~~~~-l~~l~~-~-~~~~~kCP~c~~~~~~~ 375 (382)
.|.|++|+..+. .+.|...--||-.+.... |..=.. . +...++|++|+..|...
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 107 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQK 107 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSH
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCH
Confidence 578998876542 222333356888876554 333221 1 23468999999887654
No 107
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=61.80 E-value=6.4 Score=28.95 Aligned_cols=16 Identities=13% Similarity=0.571 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|+..|....
T Consensus 64 ~~~~C~~C~~~f~~~~ 79 (95)
T 2yt9_A 64 KPYICQSCGKGFSRPD 79 (95)
T ss_dssp SSBCCSSSCCCBSSHH
T ss_pred CceECCCccchhCCHH
Confidence 4699999999887543
No 108
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=61.79 E-value=7.6 Score=25.49 Aligned_cols=16 Identities=25% Similarity=0.810 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|+..|....
T Consensus 28 ~~~~C~~C~~~f~~~~ 43 (57)
T 1bbo_A 28 RPYHCTYCNFSFKTKG 43 (57)
T ss_dssp CCEECSSSSCEESSHH
T ss_pred CCccCCCCCchhcCHH
Confidence 4699999999886543
No 109
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=61.60 E-value=11 Score=28.24 Aligned_cols=54 Identities=19% Similarity=0.408 Sum_probs=29.8
Q ss_pred ceeccccccccCC-------------CCCCeeccCchhhhHH-HHHHHHhc--CCCccccCCCCCcCCcc
Q 016792 322 IFVCPVSKEQTSD-------------DNPPMIMSCGHVLCRQ-SINKMSKN--HSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 322 ~~~Cpi~~~~~~~-------------~Npp~~l~cGhv~~~~-~l~~l~~~--~~~~~kCP~c~~~~~~~ 375 (382)
.|.|++|+..+.. +.|...--||-.|... .|..-... +...++|++|++.|...
T Consensus 17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 86 (106)
T 2ee8_A 17 EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQS 86 (106)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSH
T ss_pred CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCH
Confidence 3567776655431 2233334566666443 34433222 22468999999988654
No 110
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=61.50 E-value=2.4 Score=26.66 Aligned_cols=12 Identities=25% Similarity=0.761 Sum_probs=9.5
Q ss_pred eeccccccccCC
Q 016792 323 FVCPVSKEQTSD 334 (382)
Q Consensus 323 ~~Cpi~~~~~~~ 334 (382)
|+||+|+..+..
T Consensus 6 FiCP~C~~~l~s 17 (34)
T 3mjh_B 6 FICPQCMKSLGS 17 (34)
T ss_dssp EECTTTCCEESS
T ss_pred cCCcHHHHHcCC
Confidence 899999887654
No 111
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=61.46 E-value=5.2 Score=29.54 Aligned_cols=36 Identities=28% Similarity=0.587 Sum_probs=20.2
Q ss_pred ccCchhhhHH-HHHHHHh-c-CCCccccCCCCCcCCccc
Q 016792 341 MSCGHVLCRQ-SINKMSK-N-HSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 341 l~cGhv~~~~-~l~~l~~-~-~~~~~kCP~c~~~~~~~~ 376 (382)
-.||-.+... .|..=.. . +...++|++|+..|....
T Consensus 40 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~ 78 (96)
T 2dmd_A 40 KTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSS 78 (96)
T ss_dssp SSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHH
T ss_pred CCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHH
Confidence 3455555433 3333222 2 234699999999887543
No 112
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=61.45 E-value=46 Score=24.56 Aligned_cols=94 Identities=10% Similarity=0.022 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchH
Q 016792 110 VSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHS 189 (382)
Q Consensus 110 lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~ 189 (382)
--..++..+++.|.++.|....+++-... +.....+..+..+ ....|+.+.|+.+++.-- ....... ..+.
T Consensus 18 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~la~~--~~~~~~~~~A~~~~~~a~---~~~~~~~--~~~~ 88 (133)
T 2lni_A 18 MVKNKGNECFQKGDYPQAMKHYTEAIKRN--PKDAKLYSNRAAC--YTKLLEFQLALKDCEECI---QLEPTFI--KGYT 88 (133)
T ss_dssp HHHHHHHHHHHTTCSHHHHHHHHHHHTTC--TTCHHHHHHHHHH--HTTTTCHHHHHHHHHHHH---HHCTTCH--HHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcC--CCcHHHHHHHHHH--HHHhccHHHHHHHHHHHH---HhCCCch--HHHH
Confidence 33456788889999988888777653222 2222333333222 245799999999997642 2111111 2222
Q ss_pred HHHHHHHHcCCHHHHHHHHHHhc
Q 016792 190 LQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 190 q~fIeLl~~~~~~eAl~yar~~l 212 (382)
.--.-+.+.|+..+|+.+.++-+
T Consensus 89 ~la~~~~~~~~~~~A~~~~~~~~ 111 (133)
T 2lni_A 89 RKAAALEAMKDYTKAMDVYQKAL 111 (133)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHH
Confidence 22233456789999999988654
No 113
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=60.61 E-value=7.5 Score=27.20 Aligned_cols=16 Identities=19% Similarity=0.594 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++||+|++.|....
T Consensus 41 ~~~~C~~C~~~f~~~~ 56 (72)
T 1x6e_A 41 KPYKCLECGKAFSQNS 56 (72)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCeECCCCCcccCCHH
Confidence 4699999999887543
No 114
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=58.94 E-value=4.9 Score=32.71 Aligned_cols=12 Identities=17% Similarity=0.587 Sum_probs=6.6
Q ss_pred ccccCCCCCcCC
Q 016792 362 TFKCPYCPSDID 373 (382)
Q Consensus 362 ~~kCP~c~~~~~ 373 (382)
.++|+.|++.|.
T Consensus 78 ~~~C~~C~k~F~ 89 (133)
T 2lt7_A 78 RYQCLACGKSFI 89 (133)
T ss_dssp CEEESSSCCEES
T ss_pred cccCCCCCCCcC
Confidence 455555555554
No 115
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=58.85 E-value=9.9 Score=29.42 Aligned_cols=56 Identities=16% Similarity=0.509 Sum_probs=33.3
Q ss_pred ceeccccccccCC------------CCCCeecc---CchhhhHHH-HHHHHh--cCCCccccCC--CCCcCCcccc
Q 016792 322 IFVCPVSKEQTSD------------DNPPMIMS---CGHVLCRQS-INKMSK--NHSRTFKCPY--CPSDIDAAQC 377 (382)
Q Consensus 322 ~~~Cpi~~~~~~~------------~Npp~~l~---cGhv~~~~~-l~~l~~--~~~~~~kCP~--c~~~~~~~~~ 377 (382)
.|.|++|+..+.. ...|+.=+ ||-.+.... |..=.+ .+...++||+ |++.|.....
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~ 109 (124)
T 1ubd_C 34 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTN 109 (124)
T ss_dssp CEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTT
T ss_pred CeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHH
Confidence 4778888765431 23355543 888876543 333221 2334799986 9999876543
No 116
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=57.76 E-value=65 Score=25.04 Aligned_cols=68 Identities=25% Similarity=0.403 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCC--------------hHHHHHHHHHHHHhh-hhhhhhHhhHHHHHHHHHHHHHHHhh
Q 016792 26 EVIDLIVQEIEKALETVKSASHLD--------------DKYVLTELKRRLQDI-APLGQLEGTQKELNIALSKYTKILEK 90 (382)
Q Consensus 26 ~~id~~~~~l~~~~~~~~~~~~~~--------------~~~~l~~l~~~~~~~-~~~~~~~~~~k~~~~~~~k~~k~idk 90 (382)
+.++..++++..+.++|...++.. ...++..|...++.+ ..++++++..+.+...+.++.+.|..
T Consensus 30 ~~l~~~~~e~~~~~~eL~~l~~d~~vy~~iG~vfv~~~~~ea~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~~ 109 (117)
T 2zqm_A 30 QKVQLELTEAKKALDEIESLPDDAVVYKTVGTLIVKTTKDKAVAELKEKIETLEVRLNALERQEKKLNEKLKELTAQIQS 109 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHhHHHhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555666666666776543221 267777888877766 45667777777777777777777776
Q ss_pred cCC
Q 016792 91 SFN 93 (382)
Q Consensus 91 ~f~ 93 (382)
.|.
T Consensus 110 ~~~ 112 (117)
T 2zqm_A 110 ALR 112 (117)
T ss_dssp HHS
T ss_pred HHc
Confidence 664
No 117
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=57.67 E-value=7.6 Score=31.19 Aligned_cols=54 Identities=19% Similarity=0.384 Sum_probs=42.3
Q ss_pred ccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 318 QFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 318 ~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
.|| .-|.|..|+..+++.+.++....|.+||+.+-.++... ..+|+.|.+.+..
T Consensus 24 ~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~~~~---~~~C~~C~~~I~~ 78 (131)
T 2xjy_A 24 YWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQ---DGLCASCDKRIRA 78 (131)
T ss_dssp EEETTTCBCTTTCCBCSSTTCCEEEETTEEECHHHHHHHHCC---CEECTTTCCEECT
T ss_pred cccHHHcccCcCCCccccCCCeEEEECCEEeecCchhhhCCC---ccChhhcCCccCc
Confidence 566 56999999999976555788899999999999887532 2489999887764
No 118
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=56.67 E-value=9.2 Score=29.26 Aligned_cols=54 Identities=17% Similarity=0.461 Sum_probs=28.9
Q ss_pred ceecc--ccccccCC-------------CCCCeeccCchhhhHHH-HHHHHh--cCCCcccc--CCCCCcCCcc
Q 016792 322 IFVCP--VSKEQTSD-------------DNPPMIMSCGHVLCRQS-INKMSK--NHSRTFKC--PYCPSDIDAA 375 (382)
Q Consensus 322 ~~~Cp--i~~~~~~~-------------~Npp~~l~cGhv~~~~~-l~~l~~--~~~~~~kC--P~c~~~~~~~ 375 (382)
.|.|+ +|+..+.. +.|..--.||-.+.... |..=.+ .+...++| |.|++.|...
T Consensus 36 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~ 109 (119)
T 2jp9_A 36 PYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARS 109 (119)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSH
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCH
Confidence 47787 57665432 33333356777775443 322111 12335788 7788777643
No 119
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=56.63 E-value=50 Score=23.39 Aligned_cols=94 Identities=7% Similarity=-0.044 Sum_probs=53.3
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHHH
Q 016792 113 IIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQF 192 (382)
Q Consensus 113 lI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~f 192 (382)
.++..+.+.|.++.|....+.+-... +.....+..+.. -....|+++.|+++++.- +...........+...-
T Consensus 11 ~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~a~--~~~~~~~~~~A~~~~~~a---~~~~~~~~~~~~~~~l~ 83 (112)
T 2kck_A 11 LEGVLQYDAGNYTESIDLFEKAIQLD--PEESKYWLMKGK--ALYNLERYEEAVDCYNYV---INVIEDEYNKDVWAAKA 83 (112)
T ss_dssp GHHHHHHSSCCHHHHHHHHHHHHHHC--CCCHHHHHHHHH--HHHHTTCHHHHHHHHHHH---HHTSCCTTCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhC--cCCHHHHHHHHH--HHHHccCHHHHHHHHHHH---HHhCcccchHHHHHHHH
Confidence 45677788898888877665542111 112222222222 234579999999998764 22212211223333333
Q ss_pred HHHHHc-CCHHHHHHHHHHhcC
Q 016792 193 VEILRK-GSREEALKYARANLA 213 (382)
Q Consensus 193 IeLl~~-~~~~eAl~yar~~l~ 213 (382)
.-+.+. |+..+|++|.++-+.
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~~ 105 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEARAKL 105 (112)
T ss_dssp HHHTTCSSCSHHHHHHHHHHGG
T ss_pred HHHHHHhCCHHHHHHHHHHHhh
Confidence 345567 889999999887554
No 120
>2bez_C E2 glycoprotein; coiled coil, membrane fusion, severe acute respiratory syndrome, viral protein; 1.6A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1zv8_A 1zvb_A
Probab=56.08 E-value=58 Score=24.02 Aligned_cols=59 Identities=17% Similarity=0.230 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHhhhhhhhhHhhHHHHHHHHHHH
Q 016792 23 KTQEVIDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQDIAPLGQLEGTQKELNIALSKY 84 (382)
Q Consensus 23 ~~~~~id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~k~~~~~~~k~ 84 (382)
++...|.+-......|..+|+.. ...+..+|+.|-..+.. .|..+.++.++++.-+.++
T Consensus 16 ~A~~~i~~g~~tts~AL~kiQdV-VN~q~~aL~~L~~qL~~--NFgAISssi~dIy~RLd~l 74 (77)
T 2bez_C 16 KAISQIQESLTTTSTALGKLQDV-VNQNAQALNTLVKQLSS--NFGAISSVLNDILSRLDKV 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHhh
Confidence 35555555555555555555431 01245677777777764 6777888888887766654
No 121
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=56.00 E-value=10 Score=26.54 Aligned_cols=41 Identities=7% Similarity=0.365 Sum_probs=24.5
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHh--cCCCccccCCCCCcCCccc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSK--NHSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~--~~~~~~kCP~c~~~~~~~~ 376 (382)
.|.|++|+..+.. +..|..-.+ .+...++|++|++.|....
T Consensus 17 ~~~C~~C~k~f~~--------------~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~ 59 (74)
T 2lce_A 17 PYKCDRCQASFRY--------------KGNLASHKTVHTGEKPYRCNICGAQFNRPA 59 (74)
T ss_dssp SBCCTTSSCCBSC--------------HHHHHHHHHHHCCCCSEECTTTCCEESCHH
T ss_pred CeECCCCCceeCC--------------HHHHHHHHHHcCCCCCEECCCCCchhCCHH
Confidence 4778887776543 222332211 2234699999999887543
No 122
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=55.36 E-value=5.5 Score=23.58 Aligned_cols=16 Identities=25% Similarity=0.866 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++||+|++.|....
T Consensus 10 k~~~C~~C~k~f~~~~ 25 (37)
T 1p7a_A 10 KPFQCPDCDRSFSRSD 25 (37)
T ss_dssp SSBCCTTTCCCBSSHH
T ss_pred CCccCCCCCcccCcHH
Confidence 4699999999987543
No 123
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=54.21 E-value=5.5 Score=21.78 Aligned_cols=15 Identities=20% Similarity=0.654 Sum_probs=11.9
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|+.|++.|....
T Consensus 2 ~~~C~~C~~~f~~~~ 16 (29)
T 1ard_A 2 SFVCEVCTRAFARQE 16 (29)
T ss_dssp CCBCTTTCCBCSSHH
T ss_pred CeECCCCCcccCCHH
Confidence 479999999887543
No 124
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=53.60 E-value=8.7 Score=27.79 Aligned_cols=17 Identities=18% Similarity=0.628 Sum_probs=13.0
Q ss_pred CCccccCCCCCcCCccc
Q 016792 360 SRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 360 ~~~~kCP~c~~~~~~~~ 376 (382)
...++|++|+..|....
T Consensus 60 ~~~~~C~~C~~~f~~~~ 76 (90)
T 1a1h_A 60 EKPFACDICGRKFARSD 76 (90)
T ss_dssp CCCEECTTTCCEESSHH
T ss_pred CCCccCCCCCchhCCHH
Confidence 34699999999887543
No 125
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=53.59 E-value=3.7 Score=30.96 Aligned_cols=19 Identities=32% Similarity=0.586 Sum_probs=15.8
Q ss_pred ceeccccccccCCCCCCee
Q 016792 322 IFVCPVSKEQTSDDNPPMI 340 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~ 340 (382)
+|-||+|||++-..|-|+-
T Consensus 51 ~FkCP~CgEEFyG~~Lp~~ 69 (95)
T 2k5c_A 51 VFKCPVCGEEFYGKTLPRR 69 (95)
T ss_dssp EEECTTTCCEEETTSSCTT
T ss_pred hhcCCCccHHHhcccCChH
Confidence 7899999999988886653
No 126
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=53.52 E-value=75 Score=24.50 Aligned_cols=94 Identities=12% Similarity=0.049 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchH
Q 016792 110 VSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHS 189 (382)
Q Consensus 110 lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~ 189 (382)
+...++..+.+.|.++.|....+++--.. +.....+..+.. -....|+.+.|++|+..-- .....+-......
T Consensus 49 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~a~--~~~~~~~~~~A~~~~~~a~---~~~p~~~~~~~~~ 121 (166)
T 1a17_A 49 YYGNRSLAYLRTECYGYALGDATRAIELD--KKYIKGYYRRAA--SNMALGKFRAALRDYETVV---KVKPHDKDAKMKY 121 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHH---HHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC--cccHHHHHHHHH--HHHHhccHHHHHHHHHHHH---HhCCCCHHHHHHH
Confidence 34456777888999988887766542111 222223322222 2345799999999997642 2222222222223
Q ss_pred HHHHHHHHcCCHHHHHHHHHH
Q 016792 190 LQFVEILRKGSREEALKYARA 210 (382)
Q Consensus 190 q~fIeLl~~~~~~eAl~yar~ 210 (382)
.....+++.|+..+|+.+..+
T Consensus 122 ~~~~~~~~~~~~~~A~~~~~~ 142 (166)
T 1a17_A 122 QECNKIVKQKAFERAIAGDEH 142 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccc
Confidence 333345566778888887764
No 127
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=52.50 E-value=3.3 Score=30.15 Aligned_cols=19 Identities=21% Similarity=0.553 Sum_probs=14.9
Q ss_pred CccccCCCCCcCCcccccc
Q 016792 361 RTFKCPYCPSDIDAAQCRQ 379 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~~~~ 379 (382)
+...||||+..|..+...+
T Consensus 39 g~~~CpYCg~~f~l~~~~~ 57 (67)
T 2jrr_A 39 GWVECPYCDCKYVLKGSKA 57 (67)
T ss_dssp SEEEETTTTEEEEETTSGG
T ss_pred CeEECCCCCCEEEECCCcc
Confidence 4789999999998776543
No 128
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=52.36 E-value=23 Score=26.64 Aligned_cols=37 Identities=16% Similarity=0.021 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHH
Q 016792 108 HTVSQIIASHFYRQGLFEVGDCFISETKESECSAAILS 145 (382)
Q Consensus 108 ~~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~ 145 (382)
..++.+|.+||--.||--|...|..|+|... ...+++
T Consensus 19 rLi~~LVrEyLef~~l~~TlsVf~pEs~l~~-~~~~R~ 55 (82)
T 2d68_A 19 RLVASLVAEFLQFFNLDFTLAVFQPETSTLQ-GLEGRE 55 (82)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCC----CCHH
T ss_pred HHHHHHHHHHHHHcCCcchHHhhhhccCCCC-CCCCHH
Confidence 5789999999999999999999999999865 344544
No 129
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=51.78 E-value=8.3 Score=30.82 Aligned_cols=57 Identities=16% Similarity=0.199 Sum_probs=43.9
Q ss_pred ccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccc
Q 016792 318 QFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQC 377 (382)
Q Consensus 318 ~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~ 377 (382)
.|| .-|.|..|+..+++....+....|.+||+.+-.++... .-+|-.|.+.+...++
T Consensus 27 ~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~~---~~~C~~C~~~I~~~~~ 84 (122)
T 1m3v_A 27 YWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGN---SGAGGSGGHMGSGGDV 84 (122)
T ss_dssp EECHHHHCCSSSCCCTTTSEECCEEETTEEECHHHHHHHHCC---CCSSSCSSCCSCCEES
T ss_pred eeHhhCCCcCCCCCcccccCCeEEEECCeeecHHHHHHHcCC---CCccccCCCCcCchhe
Confidence 566 56999999999975434677899999999999887532 2389999888776554
No 130
>3k4t_A Virion-associated protein; coiled-coil, viral protein, tetramer, DNA-binding protein, P binding; 2.59A {Cauliflower mosaic virus}
Probab=51.68 E-value=77 Score=24.19 Aligned_cols=67 Identities=21% Similarity=0.215 Sum_probs=36.5
Q ss_pred CCchHHHHHHHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHhhhhhhhhHhhH--HHHH
Q 016792 1 MELNDIKDAFDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQDIAPLGQLEGTQ--KELN 78 (382)
Q Consensus 1 ~~~~~~~~~~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~--k~~~ 78 (382)
|++.++++|+..+...++. ...+|+.++..+ - +....+..+..+.++|-+ +..+++.+.+ |++.
T Consensus 2 ~nl~~i~~Ei~~~~~~~~~----~~~~i~aiL~~~-------g--s~~p~~~~lEsiAAKIIk-DisdkId~C~Cnkei~ 67 (95)
T 3k4t_A 2 ANLNQIQKEVSEILSDQKS----MKADIKAILELL-------G--SQNPIKESLETVAAKIVN-DLTKLINDCPCNKEIL 67 (95)
T ss_dssp CHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH-------T--TSCCHHHHHHHHHHHHHH-HHHHHHHHCTTHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHH----HHHHHHHHHHHh-------c--CCCcchhhHHHHHHHHHH-HHHHHHhcCcchHHHH
Confidence 6788999999999887776 445555544332 1 222334555555555422 2333444433 4444
Q ss_pred HHH
Q 016792 79 IAL 81 (382)
Q Consensus 79 ~~~ 81 (382)
..+
T Consensus 68 e~L 70 (95)
T 3k4t_A 68 EAL 70 (95)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 131
>2gvi_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.87A {Thermoplasma acidophilum} SCOP: d.81.3.1 g.39.1.18
Probab=51.64 E-value=4 Score=36.21 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=30.7
Q ss_pred cccCCcccccccceeccccccccCCCCCCeeccCchhhhHHHHHH
Q 016792 310 PVELDKEFQFHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINK 354 (382)
Q Consensus 310 ~i~Lp~~~~~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~ 354 (382)
.+++|..-+...+.+|++|||..-+. -..+..|-.+|+.|..+
T Consensus 160 ~~~~p~~~~~~~~~~C~~CGE~~~~~--~~~~~~g~~~C~~C~~~ 202 (204)
T 2gvi_A 160 GFTFEPVKKNGAKVRCDVCGEYTYEA--DAKLLNGKPVCKPDYYG 202 (204)
T ss_dssp SCCCCCCCCCCCEEECTTTCCEEEGG--GCEEETTEEECHHHHHC
T ss_pred ccCCCCCCCCCCceECCCCCCchhhc--ceeeeCCcEEChhhhcc
Confidence 45566555655688999999976552 24567899999998754
No 132
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=51.45 E-value=7.1 Score=21.13 Aligned_cols=15 Identities=27% Similarity=0.742 Sum_probs=11.6
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|+.|++.|....
T Consensus 2 ~~~C~~C~~~f~~~~ 16 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVG 16 (29)
T ss_dssp CCCCSSCCCCCCTTT
T ss_pred CCcCCCCCcccCCHH
Confidence 478999999887543
No 133
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=51.23 E-value=40 Score=28.90 Aligned_cols=94 Identities=17% Similarity=0.135 Sum_probs=42.1
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhCCCcchhh-hHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHH
Q 016792 113 IIASHFYRQGLFEVGDCFISETKESECSAA-ILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQ 191 (382)
Q Consensus 113 lI~~hLlR~G~~e~a~~f~~Es~~~~~~~~-~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~ 191 (382)
.++..+++.|.++.|....+++-....+.. ....+..+..+ ....|+.+.|+++++..- ...... ...+..-
T Consensus 42 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~--~~~~~~~~~A~~~~~~a~---~~~~~~--~~~~~~l 114 (272)
T 3u4t_A 42 RRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKI--LMKKGQDSLAIQQYQAAV---DRDTTR--LDMYGQI 114 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHH--HHHTTCHHHHHHHHHHHH---HHSTTC--THHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHH--HHHcccHHHHHHHHHHHH---hcCccc--HHHHHHH
Confidence 344566666666666655544321110111 11222222222 234577777777766532 111111 1222233
Q ss_pred HHHHHHcCCHHHHHHHHHHhcC
Q 016792 192 FVEILRKGSREEALKYARANLA 213 (382)
Q Consensus 192 fIeLl~~~~~~eAl~yar~~l~ 213 (382)
-.-....|+..+|+.+.++-+.
T Consensus 115 ~~~~~~~~~~~~A~~~~~~al~ 136 (272)
T 3u4t_A 115 GSYFYNKGNFPLAIQYMEKQIR 136 (272)
T ss_dssp HHHHHHTTCHHHHHHHHGGGCC
T ss_pred HHHHHHccCHHHHHHHHHHHhh
Confidence 3333456667777777766554
No 134
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=51.03 E-value=1.4e+02 Score=26.90 Aligned_cols=94 Identities=9% Similarity=0.115 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhhc----------------CCCChHHHHHHHHHHHHhhhhhh
Q 016792 5 DIKDAFDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKSA----------------SHLDDKYVLTELKRRLQDIAPLG 68 (382)
Q Consensus 5 ~~~~~~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~~----------------~~~~~~~~l~~l~~~~~~~~~~~ 68 (382)
.+.++.++..|+......++++.+.+....+..++..-... ++.-...-+.+++.++.+ ...
T Consensus 102 ~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~~~e~e~a~~~~~~a~~~~~~s~~~~eK~~~k~~~--~~~ 179 (301)
T 2efk_A 102 KYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLDQDINATKADVEKAKQQAHL--RSH 179 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHH--HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCHHHHHHHHHHHHH--HHH
Confidence 34455555555555555666666666666666665544321 000001122333333322 233
Q ss_pred hhHhhHHHHHHHHHHHHHHHhhcCCCChHhhh
Q 016792 69 QLEGTQKELNIALSKYTKILEKSFNPDISKAY 100 (382)
Q Consensus 69 ~~~~~~k~~~~~~~k~~k~idk~f~~~l~~~~ 100 (382)
++.+...++...|..+.+...+.|..+++.++
T Consensus 180 ~~~~a~~~Y~~~v~~~n~~~~~~~~~~~p~~~ 211 (301)
T 2efk_A 180 MAEESKNEYAAQLQRFNRDQAHFYFSQMPQIF 211 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566677777777777776666665555443
No 135
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=50.97 E-value=4.7 Score=22.01 Aligned_cols=14 Identities=21% Similarity=0.638 Sum_probs=11.2
Q ss_pred ccccCCCCCcCCcc
Q 016792 362 TFKCPYCPSDIDAA 375 (382)
Q Consensus 362 ~~kCP~c~~~~~~~ 375 (382)
.++|+.|++.|...
T Consensus 2 ~~~C~~C~k~f~~~ 15 (29)
T 2m0f_A 2 PLKCRECGKQFTTS 15 (29)
T ss_dssp CEECTTTSCEESCH
T ss_pred CccCCCCCCccCCh
Confidence 57999999987644
No 136
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=50.67 E-value=4.8 Score=21.93 Aligned_cols=15 Identities=27% Similarity=0.746 Sum_probs=11.9
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|+.|++.|....
T Consensus 3 ~~~C~~C~k~f~~~~ 17 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFS 17 (27)
T ss_dssp CEECSSSSCEESSHH
T ss_pred CccCCCcChhhCCHH
Confidence 589999999887543
No 137
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=50.48 E-value=6 Score=31.21 Aligned_cols=53 Identities=15% Similarity=0.435 Sum_probs=33.7
Q ss_pred cceeccccccccCCCCCCeeccC-c-----hh----hhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 321 SIFVCPVSKEQTSDDNPPMIMSC-G-----HV----LCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~Npp~~l~c-G-----hv----~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
+++.||+|+...+++. .|+.=| | |. +.....+.|.......+.||.|......
T Consensus 2 ~~~~C~iC~~p~~~~~-~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~~ 64 (105)
T 2xb1_A 2 LVYPCGACRSEVNDDQ-DAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKEG 64 (105)
T ss_dssp CCCBCTTTCSBCCTTS-CEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTTT
T ss_pred CcCCCCCCCCccCCCC-CEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCCC
Confidence 4789999999876543 344333 1 22 4556666665444457999999765543
No 138
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=50.36 E-value=92 Score=24.61 Aligned_cols=91 Identities=12% Similarity=0.049 Sum_probs=55.2
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHHH
Q 016792 113 IIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQF 192 (382)
Q Consensus 113 lI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~f 192 (382)
..+..+++.|.++.|....+..-... +.....+..+..+ ....|+.+.|+++++.-- .+...+....| .--
T Consensus 26 ~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~--~~~~g~~~~A~~~~~~al-~l~p~~~~~~~----~lg 96 (148)
T 2vgx_A 26 SLAFNQYQSGXYEDAHXVFQALCVLD--HYDSRFFLGLGAC--RQAMGQYDLAIHSYSYGA-VMDIXEPRFPF----HAA 96 (148)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHH-HHSTTCTHHHH----HHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHcC--cccHHHHHHHHHH--HHHHhhHHHHHHHHHHHH-hcCCCCchHHH----HHH
Confidence 46788899999998887776542211 2233333333222 245799999999998642 12222222222 223
Q ss_pred HHHHHcCCHHHHHHHHHHhc
Q 016792 193 VEILRKGSREEALKYARANL 212 (382)
Q Consensus 193 IeLl~~~~~~eAl~yar~~l 212 (382)
.-+...|+..+|+.+.++-+
T Consensus 97 ~~~~~~g~~~~A~~~~~~al 116 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQ 116 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHH
Confidence 34567899999999988754
No 139
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=49.21 E-value=7.2 Score=28.33 Aligned_cols=24 Identities=17% Similarity=0.195 Sum_probs=19.5
Q ss_pred HHHHHHHH--cCChHHHHHHHHhcch
Q 016792 151 YQILEAMK--SGNLEPALKWAAANSD 174 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n~~ 174 (382)
...+.+|+ +||++.|++|+-.+.+
T Consensus 35 ~an~~AL~at~Gnve~Ave~L~~~~~ 60 (67)
T 2dna_A 35 NANLQALIATDGDTNAAIYKLKSSQG 60 (67)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 45677887 6999999999988754
No 140
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=48.98 E-value=74 Score=23.11 Aligned_cols=99 Identities=11% Similarity=0.141 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCch--hhhch
Q 016792 111 SQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDL--QLKLH 188 (382)
Q Consensus 111 nrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~L--eF~L~ 188 (382)
-..++..+.+.|.++.|....+++--.. +.....+..+.. -....|+++.|+.+++.--..-....... ....+
T Consensus 7 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~la~--~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 7 EKELGNDAYKKKDFDTALKHYDKAKELD--PTNMTYITNQAA--VYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHH--HHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcC--CccHHHHHHHHH--HHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 3457778888999998888776652111 112222322222 23457999999999987533222211111 12233
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHhcC
Q 016792 189 SLQFVEILRKGSREEALKYARANLA 213 (382)
Q Consensus 189 ~q~fIeLl~~~~~~eAl~yar~~l~ 213 (382)
..--.-....|+..+|+.+.++-+.
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3333345577899999999886543
No 141
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=48.60 E-value=1.2e+02 Score=25.39 Aligned_cols=95 Identities=11% Similarity=-0.013 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchH
Q 016792 110 VSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHS 189 (382)
Q Consensus 110 lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~ 189 (382)
....++..+.+.|.++.|....+++-... +.....+..+. .-....|+++.|++++++.-. .....-....+.
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~la--~~~~~~g~~~~A~~~~~~~~~---~~~~~~~~~~~~ 145 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALASD--SRNARVLNNYG--GFLYEQKRYEEAYQRLLEASQ---DTLYPERSRVFE 145 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHH--HHHHHTTCHHHHHHHHHHHTT---CTTCTTHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHC--cCcHHHHHHHH--HHHHHHhHHHHHHHHHHHHHh---CccCcccHHHHH
Confidence 33455666666676666666555431111 11111221111 122345777777777665422 000111111222
Q ss_pred HHHHHHHHcCCHHHHHHHHHHh
Q 016792 190 LQFVEILRKGSREEALKYARAN 211 (382)
Q Consensus 190 q~fIeLl~~~~~~eAl~yar~~ 211 (382)
.--.-+.+.|+..+|+.+.++-
T Consensus 146 ~la~~~~~~g~~~~A~~~~~~~ 167 (252)
T 2ho1_A 146 NLGLVSLQMKKPAQAKEYFEKS 167 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHH
Confidence 2222234556667777666653
No 142
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=48.56 E-value=56 Score=25.07 Aligned_cols=53 Identities=6% Similarity=0.134 Sum_probs=35.0
Q ss_pred HHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHhhhhhhhhH
Q 016792 10 FDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQDIAPLGQLE 71 (382)
Q Consensus 10 ~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 71 (382)
++.|...+... +...-+.|+.|.+.++. +| |...+|++++.++.+...+..++
T Consensus 18 Ld~vs~~f~~~-------a~~~~~~l~~Al~~L~~-~p-sNPa~LAe~Qa~lseynl~RNaQ 70 (92)
T 2g0u_A 18 LTGIGRAFDDG-------VKDLNKQLQDAQANLTK-NP-SDPTALANYQMIMSEYNLYRNAQ 70 (92)
T ss_dssp HHHHHGGGCTT-------THHHHHHHHHHHHHHHH-ST-TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHhc-CC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 56666665442 33444667777777776 55 45579999999998875554444
No 143
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=48.38 E-value=6.7 Score=21.06 Aligned_cols=14 Identities=21% Similarity=0.653 Sum_probs=11.2
Q ss_pred cccCCCCCcCCccc
Q 016792 363 FKCPYCPSDIDAAQ 376 (382)
Q Consensus 363 ~kCP~c~~~~~~~~ 376 (382)
++|+.|++.|....
T Consensus 2 ~~C~~C~k~f~~~~ 15 (27)
T 1znf_A 2 YKCGLCERSFVEKS 15 (27)
T ss_dssp CBCSSSCCBCSSHH
T ss_pred ccCCCCCCcCCCHH
Confidence 68999999887543
No 144
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=48.15 E-value=90 Score=23.87 Aligned_cols=98 Identities=8% Similarity=0.120 Sum_probs=56.3
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhh---c
Q 016792 111 SQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLK---L 187 (382)
Q Consensus 111 nrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~---L 187 (382)
.+-++.-+++.|.++.|...-.++=. . ++.....+..+..+ -+..|+++.|+++++.--. +.......... .
T Consensus 11 ~~~lG~~~~~~~~~~~A~~~y~~Al~-~-~p~~~~~~~nlg~~--~~~~~~~~~A~~~~~~al~-~~~~~~~~~~~~a~~ 85 (127)
T 4gcn_A 11 EKDLGNAAYKQKDFEKAHVHYDKAIE-L-DPSNITFYNNKAAV--YFEEKKFAECVQFCEKAVE-VGRETRADYKLIAKA 85 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH-H-CTTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHH-HHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH-h-CCCCHHHHHhHHHH--HHHhhhHHHHHHHHHHHHH-hCcccchhhHHHHHH
Confidence 34578889999999988877766521 1 23333344333333 2457999999999886421 11111111111 1
Q ss_pred hHHHHHHHHHcCCHHHHHHHHHHhcC
Q 016792 188 HSLQFVEILRKGSREEALKYARANLA 213 (382)
Q Consensus 188 ~~q~fIeLl~~~~~~eAl~yar~~l~ 213 (382)
+...-.-....|+..+|+++.++-+.
T Consensus 86 ~~~lg~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 86 MSRAGNAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 11111223456899999999887654
No 145
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=48.04 E-value=7.7 Score=21.37 Aligned_cols=15 Identities=13% Similarity=0.578 Sum_probs=11.8
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|+.|++.|....
T Consensus 2 ~~~C~~C~k~f~~~~ 16 (30)
T 1paa_A 2 AYACGLCNRAFTRRD 16 (30)
T ss_dssp CSBCTTTCCBCSSSH
T ss_pred CcCCcccCcccCChH
Confidence 479999999887543
No 146
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=48.02 E-value=1.2e+02 Score=25.22 Aligned_cols=122 Identities=9% Similarity=0.035 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCChHhhhccccCCHHHHHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHH
Q 016792 74 QKELNIALSKYTKILEKSFNPDISKAYRNIEFDTHTVSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQI 153 (382)
Q Consensus 74 ~k~~~~~~~k~~k~idk~f~~~l~~~~~~~~~~~~~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I 153 (382)
.+++..++.-+.+.++..-..+ . .....++..+.+.|.++.|....+++-... +.....+..+..+
T Consensus 20 ~~~~~~A~~~~~~al~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~l~~~ 85 (228)
T 4i17_A 20 AKNYAVAFEKYSEYLKLTNNQD-----------S-VTAYNCGVCADNIKKYKEAADYFDIAIKKN--YNLANAYIGKSAA 85 (228)
T ss_dssp TTCHHHHHHHHHHHHHHTTTCC-----------H-HHHHHHHHHHHHTTCHHHHHHHHHHHHHTT--CSHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhccCCCC-----------c-HHHHHHHHHHHHhhcHHHHHHHHHHHHHhC--cchHHHHHHHHHH
Confidence 3455666666666666321011 1 122337888899999998888776653222 2233334333333
Q ss_pred HHHHHcCChHHHHHHHHhcchHhhhcCCchhh-----hchHHHHHHHHHcCCHHHHHHHHHHhcCC
Q 016792 154 LEAMKSGNLEPALKWAAANSDKLTQNGSDLQL-----KLHSLQFVEILRKGSREEALKYARANLAP 214 (382)
Q Consensus 154 ~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF-----~L~~q~fIeLl~~~~~~eAl~yar~~l~~ 214 (382)
....|+.+.|++++++- +.....+-.+ ..+...-.-....|+..+|+.+.++-+.-
T Consensus 86 --~~~~~~~~~A~~~~~~a---l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 146 (228)
T 4i17_A 86 --YRDMKNNQEYIATLTEG---IKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV 146 (228)
T ss_dssp --HHHTTCHHHHHHHHHHH---HHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred --HHHcccHHHHHHHHHHH---HHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc
Confidence 24579999999999864 2222222222 22333333445679999999999987653
No 147
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=48.00 E-value=3.7 Score=30.90 Aligned_cols=16 Identities=19% Similarity=0.438 Sum_probs=13.2
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
+...||||+..|..+.
T Consensus 52 g~~~CpYCg~~f~l~~ 67 (80)
T 2jvm_A 52 GFVECGYCDRRYIHES 67 (80)
T ss_dssp CEEECSSSSCEEEEHH
T ss_pred CeEECCCCCCEEEecC
Confidence 4789999999987664
No 148
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.91 E-value=5.5 Score=23.46 Aligned_cols=16 Identities=25% Similarity=0.746 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 8 k~~~C~~C~k~f~~~~ 23 (36)
T 2els_A 8 KIFTCEYCNKVFKFKH 23 (36)
T ss_dssp CCEECTTTCCEESSHH
T ss_pred CCEECCCCCceeCCHH
Confidence 4699999999887543
No 149
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=47.91 E-value=16 Score=25.77 Aligned_cols=16 Identities=19% Similarity=0.532 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 45 ~~~~C~~C~~~f~~~~ 60 (77)
T 2cot_A 45 KPYKCDECGKAFIQRS 60 (77)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCeeCCCCCCccCCHH
Confidence 4699999999887543
No 150
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=53.52 E-value=3.9 Score=22.10 Aligned_cols=15 Identities=13% Similarity=0.481 Sum_probs=11.3
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|+.|++.|....
T Consensus 2 p~~C~~C~k~f~~~~ 16 (26)
T 2lvu_A 2 PYVCERCGKRFVQSS 16 (26)
Confidence 478999988887544
No 151
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=47.53 E-value=5.6 Score=21.70 Aligned_cols=14 Identities=14% Similarity=0.612 Sum_probs=11.5
Q ss_pred ccccCCCCCcCCcc
Q 016792 362 TFKCPYCPSDIDAA 375 (382)
Q Consensus 362 ~~kCP~c~~~~~~~ 375 (382)
.++|+.|++.|...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (28)
T 2kvf_A 3 PYSCSVCGKRFSLK 16 (28)
T ss_dssp SEECSSSCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 58999999988754
No 152
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=47.36 E-value=8.1 Score=21.08 Aligned_cols=15 Identities=27% Similarity=0.778 Sum_probs=11.8
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|++|++.|....
T Consensus 2 ~~~C~~C~k~f~~~~ 16 (30)
T 1klr_A 2 TYQCQYCEFRSADSS 16 (30)
T ss_dssp CCCCSSSSCCCSCSH
T ss_pred CccCCCCCCccCCHH
Confidence 479999999887543
No 153
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=47.10 E-value=15 Score=25.89 Aligned_cols=16 Identities=31% Similarity=0.756 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++||+|++.|....
T Consensus 44 ~~~~C~~C~~~f~~~~ 59 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKS 59 (77)
T ss_dssp SSEECSSSSCEESSHH
T ss_pred CccCCCCCCCccCCHH
Confidence 4699999999887543
No 154
>1wyy_A E2 glycoprotein; membrane fusion, severe acute respiratory syndrome, viral PR; 2.20A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1wnc_A 2fxp_A
Probab=46.88 E-value=1.2e+02 Score=25.06 Aligned_cols=74 Identities=16% Similarity=0.255 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHhhhhhhhhHhhHHHHHHHHHHHH
Q 016792 6 IKDAFDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQDIAPLGQLEGTQKELNIALSKYT 85 (382)
Q Consensus 6 ~~~~~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~k~~~~~~~k~~ 85 (382)
+.+.-..++..|.....++++-++..-..|++..+-++. +..+++.|-..+.. .|..+.++.++++.-+.++.
T Consensus 16 L~~NQk~iA~sFN~A~~~~~~g~~tts~AL~kiQ~VVN~-----q~~aL~~l~~qL~~--nFgAISssi~dIy~rLd~le 88 (149)
T 1wyy_A 16 LYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQ-----NAQALNTLVKQLSS--NFGAISSVLNDILSRLDKVE 88 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHH
Confidence 455555666665554445555555554444444444443 55677777777664 67777777777777666554
Q ss_pred H
Q 016792 86 K 86 (382)
Q Consensus 86 k 86 (382)
.
T Consensus 89 A 89 (149)
T 1wyy_A 89 A 89 (149)
T ss_dssp H
T ss_pred H
Confidence 3
No 155
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=46.83 E-value=5.4 Score=30.44 Aligned_cols=18 Identities=22% Similarity=0.458 Sum_probs=14.3
Q ss_pred CccccCCCCCcCCccccc
Q 016792 361 RTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~~~ 378 (382)
+...||||+..|..+.-.
T Consensus 47 g~~~CpYCg~~y~~~~~~ 64 (87)
T 2jz8_A 47 DEKICPYCSTLYRYDPSL 64 (87)
T ss_dssp CEECCTTTCCEEECCTTS
T ss_pred CeEECCCCCCEeEcCCCC
Confidence 478999999998776543
No 156
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=46.22 E-value=16 Score=26.54 Aligned_cols=15 Identities=20% Similarity=0.687 Sum_probs=10.4
Q ss_pred CccccCCCCCcCCcc
Q 016792 361 RTFKCPYCPSDIDAA 375 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~ 375 (382)
..++|++|++.|...
T Consensus 30 ~~~~C~~C~k~f~~~ 44 (88)
T 1llm_C 30 KPFACDICGRKFARS 44 (88)
T ss_dssp CCEECTTTCCEESSH
T ss_pred CCccCCCCCCccCCH
Confidence 357888888777543
No 157
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.91 E-value=7.5 Score=22.68 Aligned_cols=16 Identities=25% Similarity=0.723 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 8 k~~~C~~C~k~f~~~~ 23 (36)
T 2elt_A 8 KPYKCPQCSYASAIKA 23 (36)
T ss_dssp CSEECSSSSCEESSHH
T ss_pred CCCCCCCCCcccCCHH
Confidence 4699999999887543
No 158
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=44.77 E-value=92 Score=22.97 Aligned_cols=96 Identities=9% Similarity=-0.089 Sum_probs=52.6
Q ss_pred HHHHHHHhCcHHHHHHHHHHhCCCcc-hhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhc-CCchhhhchHHH
Q 016792 114 IASHFYRQGLFEVGDCFISETKESEC-SAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQN-GSDLQLKLHSLQ 191 (382)
Q Consensus 114 I~~hLlR~G~~e~a~~f~~Es~~~~~-~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~-~s~LeF~L~~q~ 191 (382)
.+..+++.|.++.|....++.--... +....+.+..+ -.-....|+.+.|+.+++.-- ... ++...-..+..-
T Consensus 8 ~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l--g~~~~~~~~~~~A~~~~~~~~---~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 8 VAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWL--GESYYATRNFQLAEAQFRDLV---SRYPTHDKAAGGLLKL 82 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHH--HHHHHHTTCHHHHHHHHHHHH---HHCTTSTTHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHH--HHHHHHhccHHHHHHHHHHHH---HHCCCCcccHHHHHHH
Confidence 56778889999888777665421110 11111222222 223456899999999998642 211 111111112222
Q ss_pred HHHHHHcCCHHHHHHHHHHhcCC
Q 016792 192 FVEILRKGSREEALKYARANLAP 214 (382)
Q Consensus 192 fIeLl~~~~~~eAl~yar~~l~~ 214 (382)
-.-+.+.|+..+|+.+.++-+..
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHH
Confidence 23344679999999998876543
No 159
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=44.31 E-value=5 Score=21.99 Aligned_cols=15 Identities=20% Similarity=0.815 Sum_probs=11.8
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|+.|++.|....
T Consensus 3 ~~~C~~C~k~f~~~~ 17 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLA 17 (27)
T ss_dssp TEEETTTTEEESCHH
T ss_pred CcCCCCCCcccCCHH
Confidence 589999999887543
No 160
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=44.18 E-value=15 Score=25.37 Aligned_cols=17 Identities=18% Similarity=0.694 Sum_probs=13.3
Q ss_pred CCccccCCCCCcCCccc
Q 016792 360 SRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 360 ~~~~kCP~c~~~~~~~~ 376 (382)
...++|++|++.|....
T Consensus 47 ~~~~~C~~C~~~f~~~~ 63 (73)
T 1f2i_G 47 QKPFQCRICMRNFSRSD 63 (73)
T ss_dssp CCCEECTTTCCEESCHH
T ss_pred CCCeECCCCCchhCCHH
Confidence 34699999999987644
No 161
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=43.86 E-value=1.1e+02 Score=23.58 Aligned_cols=91 Identities=12% Similarity=-0.003 Sum_probs=54.5
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHHH
Q 016792 113 IIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQF 192 (382)
Q Consensus 113 lI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~f 192 (382)
..+..+++.|.++.|....++.-... +.....+..+..+ ....|+.+.|+.+++.-- .+...+... +..--
T Consensus 23 ~~a~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~--~~~~g~~~~A~~~~~~al-~~~p~~~~~----~~~lg 93 (142)
T 2xcb_A 23 ALGFNQYQAGKWDDAQKIFQALCMLD--HYDARYFLGLGAC--RQSLGLYEQALQSYSYGA-LMDINEPRF----PFHAA 93 (142)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHH-HHCTTCTHH----HHHHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHhC--CccHHHHHHHHHH--HHHHhhHHHHHHHHHHHH-hcCCCCcHH----HHHHH
Confidence 45788899999998888776652212 2233333333332 245799999999998642 111112222 22223
Q ss_pred HHHHHcCCHHHHHHHHHHhc
Q 016792 193 VEILRKGSREEALKYARANL 212 (382)
Q Consensus 193 IeLl~~~~~~eAl~yar~~l 212 (382)
.-+...|+..+|+.+.++-+
T Consensus 94 ~~~~~~g~~~~A~~~~~~al 113 (142)
T 2xcb_A 94 ECHLQLGDLDGAESGFYSAR 113 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHH
Confidence 33556799999999888643
No 162
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=49.78 E-value=4.9 Score=22.24 Aligned_cols=15 Identities=13% Similarity=0.487 Sum_probs=11.3
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|++|++.|....
T Consensus 3 ~~~C~~C~k~f~~~~ 17 (30)
T 2lvr_A 3 PYVCIHCQRQFADPG 17 (30)
Confidence 478999988876543
No 163
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.70 E-value=6.8 Score=23.16 Aligned_cols=15 Identities=40% Similarity=0.877 Sum_probs=12.3
Q ss_pred CccccCCCCCcCCcc
Q 016792 361 RTFKCPYCPSDIDAA 375 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~ 375 (382)
..++|++|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 8 RAMKCPYCDFYFMKN 22 (37)
T ss_dssp CCEECSSSSCEECSS
T ss_pred CCeECCCCChhhccC
Confidence 368999999988764
No 164
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=43.58 E-value=8 Score=22.31 Aligned_cols=16 Identities=13% Similarity=0.461 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 6 k~~~C~~C~k~f~~~~ 21 (35)
T 2elx_A 6 SGYVCALCLKKFVSSI 21 (35)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeECCCCcchhCCHH
Confidence 3689999999887543
No 165
>3vlc_E Golgi to ER traffic protein 1; ATPase, membrane protein insertion, ATP binding, membrane PR binding; HET: ADP; 4.50A {Saccharomyces cerevisiae}
Probab=43.48 E-value=29 Score=26.78 Aligned_cols=49 Identities=20% Similarity=0.122 Sum_probs=31.2
Q ss_pred HHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHh
Q 016792 10 FDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQD 63 (382)
Q Consensus 10 ~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 63 (382)
+++|+-+ ++......++..++.+.+.++++.+..|.=.--++|.+++.+
T Consensus 19 ~~~v~p~-----s~~~~~~~~lk~E~~~lk~E~~stSaQDEFAKWAKL~Rk~DK 67 (94)
T 3vlc_E 19 ISKFAPG-----NELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDS 67 (94)
T ss_dssp ------------CCTTHHHHHHHHHHHHHHHHHTTSCTTTCHHHHHHHHHHHHH
T ss_pred HHHhCcc-----cHhHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 4555544 445566777888888999999887777765666777777654
No 166
>1rh1_A Colicin B; FEPA, cytotoxic bacterial protein, TONB, antibiotic; 2.50A {Escherichia coli} SCOP: b.110.1.1 f.1.1.1
Probab=43.48 E-value=64 Score=31.96 Aligned_cols=56 Identities=14% Similarity=0.176 Sum_probs=34.5
Q ss_pred HHHHHHHHHhCcHHHHHHHHHHh---CCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 016792 112 QIIASHFYRQGLFEVGDCFISET---KESECSAAILSIFEDMYQILEAMKSGNLEPALKWAA 170 (382)
Q Consensus 112 rlI~~hLlR~G~~e~a~~f~~Es---~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~ 170 (382)
.+|++-|-.-.+-+.|+.|.+=+ ++.. ...+.+.-..++.+++..|||.|-+--++
T Consensus 390 ~AI~nALesvd~~~mAkNL~kfsK~Fk~~d---~ai~~~dv~ek~~kg~eTGNWrPLfvklE 448 (511)
T 1rh1_A 390 EAIVNAWKAFNAEDMGNKFAALGKTFKAAD---YAIKANNIREKSIEGYQTGNWGPLMLEVE 448 (511)
T ss_dssp HHHHHHHHHCCHHHHHHTTSSSSSCSSSTT---HHHHHHHHHHHHHHHHSSSCCHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhhhcccce---eeeeHHHHHHHHHhheeCCCchhHHHHHH
Confidence 36777777777777777654332 3322 22233444556677788899999775544
No 167
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=43.42 E-value=93 Score=27.89 Aligned_cols=89 Identities=11% Similarity=0.019 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHh-CCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhch
Q 016792 110 VSQIIASHFYRQGLFEVGDCFISET-KESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLH 188 (382)
Q Consensus 110 lnrlI~~hLlR~G~~e~a~~f~~Es-~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~ 188 (382)
.-+.+++++.+.|..+.|....++. .... .+........+. .-....|+.+.|+++++. ..+.+ .+
T Consensus 67 a~~~la~~~~~~~~~~~A~~~l~~ll~~~~-~P~~~~~~~~la--~~~~~~g~~~~Al~~l~~--------~~~~~--~~ 133 (291)
T 3mkr_A 67 AVRMFAEYLASHSRRDAIVAELDREMSRSV-DVTNTTFLLMAA--SIYFYDQNPDAALRTLHQ--------GDSLE--CM 133 (291)
T ss_dssp HHHHHHHHHHCSTTHHHHHHHHHHHHHSCC-CCSCHHHHHHHH--HHHHHTTCHHHHHHHHTT--------CCSHH--HH
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHhccc-CCCCHHHHHHHH--HHHHHCCCHHHHHHHHhC--------CCCHH--HH
Confidence 3455667777777666655555442 1100 011111111111 122346777777777765 12222 22
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHh
Q 016792 189 SLQFVEILRKGSREEALKYARAN 211 (382)
Q Consensus 189 ~q~fIeLl~~~~~~eAl~yar~~ 211 (382)
.....-+++.|+..+|+.+.++-
T Consensus 134 ~~l~~~~~~~g~~~~A~~~l~~~ 156 (291)
T 3mkr_A 134 AMTVQILLKLDRLDLARKELKKM 156 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHH
Confidence 22222344566777777666653
No 168
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=43.16 E-value=7.2 Score=21.31 Aligned_cols=15 Identities=33% Similarity=0.919 Sum_probs=11.4
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|+.|++.|....
T Consensus 2 ~~~C~~C~k~f~~~~ 16 (29)
T 1rik_A 2 KFACPECPKRFMRSD 16 (29)
T ss_dssp CEECSSSSCEESCSH
T ss_pred CccCCCCCchhCCHH
Confidence 478999998876543
No 169
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=43.09 E-value=99 Score=22.88 Aligned_cols=33 Identities=6% Similarity=0.167 Sum_probs=18.9
Q ss_pred HHHHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhh
Q 016792 8 DAFDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKS 44 (382)
Q Consensus 8 ~~~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~ 44 (382)
++++.++++++. ....|+.+++.|....+.|..
T Consensus 11 e~l~~~A~~~~~----~~~~i~~~l~~L~~~~~~l~~ 43 (98)
T 3gwk_C 11 EELRSSAQKYTA----GSQQVTEVLNLLTQEQAVIDE 43 (98)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHc
Confidence 456666666666 445555555555555555544
No 170
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.08 E-value=9.9 Score=22.10 Aligned_cols=15 Identities=20% Similarity=0.585 Sum_probs=12.2
Q ss_pred CccccCCCCCcCCcc
Q 016792 361 RTFKCPYCPSDIDAA 375 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~ 375 (382)
..++|+.|++.|...
T Consensus 8 ~~~~C~~C~k~f~~~ 22 (36)
T 2elr_A 8 KTHLCDMCGKKFKSK 22 (36)
T ss_dssp SSCBCTTTCCBCSSH
T ss_pred CCeecCcCCCCcCch
Confidence 468999999998754
No 171
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=43.02 E-value=25 Score=24.49 Aligned_cols=12 Identities=17% Similarity=0.595 Sum_probs=10.0
Q ss_pred CccccCCCCCcC
Q 016792 361 RTFKCPYCPSDI 372 (382)
Q Consensus 361 ~~~kCP~c~~~~ 372 (382)
..++|++|++.|
T Consensus 67 ~~~~C~~C~k~F 78 (79)
T 2dlk_A 67 RDYICEFSGPSS 78 (79)
T ss_dssp CCCSCCSSSCCC
T ss_pred CCeeCCCCCCCC
Confidence 468999999876
No 172
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=42.79 E-value=50 Score=22.27 Aligned_cols=22 Identities=18% Similarity=0.306 Sum_probs=16.7
Q ss_pred HHHHHHHH--cCChHHHHHHHHhc
Q 016792 151 YQILEAMK--SGNLEPALKWAAAN 172 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n 172 (382)
..++.+|+ +||++.|++|+-.|
T Consensus 28 ~~~~~AL~~t~gn~e~A~e~L~~~ 51 (52)
T 2jy5_A 28 EANLQALIATGGDINAAIERLLGS 51 (52)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhC
Confidence 35567776 69999999998654
No 173
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.77 E-value=8.5 Score=22.55 Aligned_cols=15 Identities=27% Similarity=0.744 Sum_probs=12.2
Q ss_pred CccccCCCCCcCCcc
Q 016792 361 RTFKCPYCPSDIDAA 375 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~ 375 (382)
..++|++|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2elq_A 8 KPFKCSLCEYATRSK 22 (36)
T ss_dssp CSEECSSSSCEESCH
T ss_pred CCccCCCCCchhCCH
Confidence 469999999988754
No 174
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=42.50 E-value=23 Score=27.58 Aligned_cols=16 Identities=25% Similarity=0.696 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 99 ~~~~C~~C~k~f~~~~ 114 (129)
T 2wbt_A 99 HTKVCPVCKKEFTSTD 114 (129)
T ss_dssp CCCBCTTTCCBCSSHH
T ss_pred CCCCCCCCCcccCCHH
Confidence 3699999999987654
No 175
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=42.00 E-value=12 Score=27.70 Aligned_cols=36 Identities=19% Similarity=0.384 Sum_probs=23.2
Q ss_pred cccceecccccc------cc--CCCCCCeeccCchhhhHHHHHH
Q 016792 319 FHSIFVCPVSKE------QT--SDDNPPMIMSCGHVLCRQSINK 354 (382)
Q Consensus 319 ~hS~~~Cpi~~~------~~--~~~Npp~~l~cGhv~~~~~l~~ 354 (382)
.+..++||||.. .+ +....|-.+.||=--+++-+.+
T Consensus 14 ~~~tWVCpICsfsN~v~s~fdp~~~~lPpC~aCGIkP~~~~i~~ 57 (76)
T 2j9u_B 14 VVSTWVCPICMVSNETQGEFTKDTLPTPICINCGVPADYELTKS 57 (76)
T ss_dssp -CEEEECTTTCCEEEESSCCCTTCSSCCBCTTTCCBCCHHHHGG
T ss_pred cccceECccccccCcCccccCCCCCCCCcccccCccCCHHHHHH
Confidence 356889999982 11 1144567788997777666655
No 176
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=41.91 E-value=8.8 Score=25.70 Aligned_cols=10 Identities=30% Similarity=0.939 Sum_probs=8.1
Q ss_pred ccccCCCCCc
Q 016792 362 TFKCPYCPSD 371 (382)
Q Consensus 362 ~~kCP~c~~~ 371 (382)
..+||.|+..
T Consensus 30 dw~CP~Cg~~ 39 (46)
T 6rxn_A 30 DWCCPVCGVS 39 (46)
T ss_dssp TCBCTTTCCB
T ss_pred CCcCcCCCCc
Confidence 4799999864
No 177
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=41.51 E-value=11 Score=25.75 Aligned_cols=22 Identities=18% Similarity=0.306 Sum_probs=17.4
Q ss_pred HHHHHHHH--cCChHHHHHHHHhc
Q 016792 151 YQILEAMK--SGNLEPALKWAAAN 172 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n 172 (382)
...+.+|+ +||++.|++|+-.+
T Consensus 27 ~~~~~AL~~t~gnve~Ave~L~~~ 50 (53)
T 2knz_A 27 EANLQALIATGGDINAAIERLLGS 50 (53)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHc
Confidence 35567776 69999999999766
No 178
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=41.00 E-value=8.3 Score=21.04 Aligned_cols=14 Identities=21% Similarity=0.880 Sum_probs=11.3
Q ss_pred ccccCCCCCcCCcc
Q 016792 362 TFKCPYCPSDIDAA 375 (382)
Q Consensus 362 ~~kCP~c~~~~~~~ 375 (382)
.++|+.|++.|...
T Consensus 3 ~~~C~~C~~~f~~~ 16 (30)
T 2m0d_A 3 PYQCDYCGRSFSDP 16 (30)
T ss_dssp CEECTTTCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 58999999988654
No 179
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.71 E-value=5.4 Score=27.56 Aligned_cols=13 Identities=8% Similarity=-0.146 Sum_probs=9.1
Q ss_pred ceeccccccccCC
Q 016792 322 IFVCPVSKEQTSD 334 (382)
Q Consensus 322 ~~~Cpi~~~~~~~ 334 (382)
.|.|++|+..+..
T Consensus 18 ~~~C~~C~k~f~~ 30 (73)
T 2ctu_A 18 SQKCSKCGIIFIR 30 (73)
T ss_dssp EEECSSSCCEEEC
T ss_pred CeeCCcccchhCC
Confidence 4788888776643
No 180
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=40.58 E-value=12 Score=21.72 Aligned_cols=15 Identities=33% Similarity=0.919 Sum_probs=11.9
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|+.|++.|....
T Consensus 2 p~~C~~C~k~F~~~~ 16 (33)
T 1rim_A 2 KFACPECPKRFMRSD 16 (33)
T ss_dssp CCCCSSSCCCCSSHH
T ss_pred cccCCCCCchhCCHH
Confidence 479999999987543
No 181
>1ywm_A C protein alpha-antigen; beta sandwich, fibronectin fold, antiparallel three-helix BU surface active protein; 1.86A {Streptococcus agalactiae} PDB: 2o0i_1
Probab=40.47 E-value=1.1e+02 Score=26.12 Aligned_cols=57 Identities=9% Similarity=0.246 Sum_probs=41.8
Q ss_pred CchHHHHHHHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHhh
Q 016792 2 ELNDIKDAFDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQDI 64 (382)
Q Consensus 2 ~~~~~~~~~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 64 (382)
|-++|++-+|+|.+|.+-. .-....=|+++..|...+..|.+ .|..+ ..++++|.++
T Consensus 122 DsT~lr~kIdeV~kka~Dp-kws~~srdeVl~~ld~Ik~DIDn-nPKtq----~dI~nkI~eV 178 (200)
T 1ywm_A 122 DSTTLRDKIEEVRTNANDP-KWTEESRTEVLTGLDTIKTDIDN-NPKTQ----TDIDSKIVEV 178 (200)
T ss_dssp CCHHHHHHHHHHHHHHTST-TBCHHHHHHHHHHHHHHHHHHHH-SCCCH----HHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhcccCC-CCCcccHHHHHHHHHHHhhhhcc-CCccc----cchHHHhhhh
Confidence 4578999999999997661 22567778999999999999987 45444 3455555544
No 182
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=40.35 E-value=1.1e+02 Score=22.73 Aligned_cols=95 Identities=13% Similarity=0.064 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhch
Q 016792 109 TVSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLH 188 (382)
Q Consensus 109 ~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~ 188 (382)
..-..++..++..|.++.|....+++-... +.....+..+. .-.+..|+++.|+.+++.-- .....+ ...+
T Consensus 10 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~l~--~~~~~~~~~~~A~~~~~~al---~~~p~~--~~~~ 80 (137)
T 3q49_B 10 QELKEQGNRLFVGRKYPEAAACYGRAITRN--PLVAVYYTNRA--LCYLKMQQPEQALADCRRAL---ELDGQS--VKAH 80 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHH--HHHHHTTCHHHHHHHHHHHH---HHCTTC--HHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhC--cCcHHHHHHHH--HHHHHhcCHHHHHHHHHHHH---HhCchh--HHHH
Confidence 344567888889999988887776542111 22223332222 22345899999999987642 211122 2233
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHhc
Q 016792 189 SLQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 189 ~q~fIeLl~~~~~~eAl~yar~~l 212 (382)
..--.-+...|+..+|+.+.++-+
T Consensus 81 ~~l~~~~~~~~~~~~A~~~~~~a~ 104 (137)
T 3q49_B 81 FFLGQCQLEMESYDEAIANLQRAY 104 (137)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 333344556789999998888654
No 183
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=39.67 E-value=1.5e+02 Score=23.91 Aligned_cols=20 Identities=5% Similarity=-0.062 Sum_probs=9.3
Q ss_pred HHHHHHHHhCcHHHHHHHHH
Q 016792 113 IIASHFYRQGLFEVGDCFIS 132 (382)
Q Consensus 113 lI~~hLlR~G~~e~a~~f~~ 132 (382)
.++..+.+.|.++.|....+
T Consensus 47 ~l~~~~~~~~~~~~A~~~~~ 66 (225)
T 2vq2_A 47 VRAEIYQYLKVNDKAQESFR 66 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCChHHHHHHHH
Confidence 34444445555544444433
No 184
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.35 E-value=9.1 Score=22.50 Aligned_cols=16 Identities=25% Similarity=0.910 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 8 k~~~C~~C~k~f~~~~ 23 (37)
T 2elo_A 8 RSYSCPVCEKSFSEDR 23 (37)
T ss_dssp CCCEETTTTEECSSHH
T ss_pred CCcCCCCCCCccCCHH
Confidence 3689999999887643
No 185
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=45.43 E-value=6.3 Score=21.70 Aligned_cols=15 Identities=20% Similarity=0.521 Sum_probs=10.9
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|++|++.|....
T Consensus 2 ~~~C~~C~k~f~~~~ 16 (29)
T 2lvt_A 2 PCQCVMCGKAFTQAS 16 (29)
Confidence 478999988876543
No 186
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=39.02 E-value=26 Score=25.13 Aligned_cols=23 Identities=22% Similarity=0.429 Sum_probs=18.0
Q ss_pred HHHHHHHH--cCChHHHHHHHHhcc
Q 016792 151 YQILEAMK--SGNLEPALKWAAANS 173 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n~ 173 (382)
..-.++|. +||++.|++|+++..
T Consensus 25 ~dcKkAL~e~~GDi~~Ai~~Lr~kg 49 (64)
T 2cp9_A 25 VNCKKALETCGGDLKQAEIWLHKEA 49 (64)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 34566776 699999999998764
No 187
>3zqe_A Protein PRGI, cell invasion protein SIPD; cell invasion complex, type III secretion, T3 complex, HOST pathogen interaction; HET: DXC; 2.19A {Salmonella enterica subsp} PDB: 3zqb_A* 2kv7_A 2x9c_A 2lpz_A 2jow_A
Probab=38.89 E-value=95 Score=29.06 Aligned_cols=55 Identities=16% Similarity=0.274 Sum_probs=34.9
Q ss_pred HHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHhhhhhhhhHhh
Q 016792 10 FDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQDIAPLGQLEGT 73 (382)
Q Consensus 10 ~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 73 (382)
+|.|..+++.-...++ +.|++|.+.|.. +|.+ +..|.+++.+|.+...+-.+++.
T Consensus 12 ld~v~~~~~~~a~~~~-------~~v~~ai~~l~~-~~~n-p~~l~~~Q~~~~~~s~~~n~~s~ 66 (305)
T 3zqe_A 12 LDDVSAKFDTGVDNLQ-------TQVTEALDKLAA-KPSD-PALLAAYQSKLSEYNLYRNAQSN 66 (305)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHH-STTC-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH-------HHHHHHHHHHhc-CCCC-HHHHHHHHHHHHHHHHHHhHHHH
Confidence 5677776655443344 445556666665 5544 46788999999988766555533
No 188
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=38.73 E-value=10 Score=21.91 Aligned_cols=16 Identities=31% Similarity=0.669 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 6 k~~~C~~C~k~f~~~~ 21 (35)
T 1srk_A 6 RPFVCRICLSAFTTKA 21 (35)
T ss_dssp SCEECSSSCCEESSHH
T ss_pred cCeeCCCCCcccCCHH
Confidence 3689999999887543
No 189
>3d00_A Tungsten formylmethanofuran dehydrogenase subunit; FWDE/GAPDH domain-like fold, structural genomics, joint CENT structural genomics; HET: MSE; 1.90A {Syntrophus aciditrophicus}
Probab=38.46 E-value=7.8 Score=34.00 Aligned_cols=31 Identities=26% Similarity=0.481 Sum_probs=22.6
Q ss_pred CCcccccccceeccccccccCCCCCCeeccCchhhhHHHH
Q 016792 313 LDKEFQFHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSI 352 (382)
Q Consensus 313 Lp~~~~~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l 352 (382)
+|....+ .+.+|++|||..-+. |-.+|+.|.
T Consensus 155 ~p~~~~~-~~~~C~~CGE~~~~~--------g~~~C~~C~ 185 (191)
T 3d00_A 155 LEKKHKG-KIVLCPQCREAYPAQ--------DGELCLSCQ 185 (191)
T ss_dssp GCCCCCC-CEEECTTTCCEEEGG--------GCSSCHHHH
T ss_pred CCCcCCc-CCEECCcCCCChhhC--------CCcCCcccc
Confidence 5654554 778899999965442 888888875
No 190
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.32 E-value=15 Score=22.24 Aligned_cols=16 Identities=13% Similarity=0.611 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 10 k~~~C~~C~k~f~~~~ 25 (42)
T 2ytb_A 10 KPYRCDQCGKAFSQKG 25 (42)
T ss_dssp CSBCCTTTTCCBSSHH
T ss_pred CCeeCCCccchhCCHH
Confidence 4699999999987643
No 191
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=38.29 E-value=18 Score=30.36 Aligned_cols=36 Identities=19% Similarity=0.640 Sum_probs=19.9
Q ss_pred ccCchhhhHH-HHHHHHh--cCCCccccCCCCCcCCccc
Q 016792 341 MSCGHVLCRQ-SINKMSK--NHSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 341 l~cGhv~~~~-~l~~l~~--~~~~~~kCP~c~~~~~~~~ 376 (382)
--||-.+... .|..=.+ .+...++||+|++.|....
T Consensus 137 ~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~ 175 (190)
T 2i13_A 137 PECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRD 175 (190)
T ss_dssp TTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHH
T ss_pred CCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHH
Confidence 4566666543 3333211 1334688888888876543
No 192
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=37.99 E-value=19 Score=28.56 Aligned_cols=51 Identities=20% Similarity=0.373 Sum_probs=40.4
Q ss_pred cccc-ceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcc
Q 016792 318 QFHS-IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 318 ~~hS-~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~ 375 (382)
.||. -|.|..|+..++. .++....|.+||+.+-.++. ..+|+.|++.+...
T Consensus 25 ~~H~~CF~C~~C~~~L~~--~~f~~~~g~~yC~~cy~~~~-----~~~C~~C~~~I~~~ 76 (126)
T 2xqn_T 25 NWHLKHFCCFDCDSILAG--EIYVMVNDKPVCKPCYVKNH-----AVVCQGCHNAIDPE 76 (126)
T ss_dssp EECGGGSBCTTTCCBCTT--SEEEEETTEEEEHHHHHHHS-----CCBCTTTCSBCCTT
T ss_pred CccCCCCCcCCCCCCCCc--CEEEeECCEEechHHhCcCc-----CccCcccCCcCCcC
Confidence 5664 5999999998875 36778999999999998763 24899999888753
No 193
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=37.95 E-value=6.4 Score=34.44 Aligned_cols=26 Identities=12% Similarity=0.300 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHhC
Q 016792 110 VSQIIASHFYRQGLFEVGDCFISETK 135 (382)
Q Consensus 110 lnrlI~~hLlR~G~~e~a~~f~~Es~ 135 (382)
.-...+.+.-+.||..+|..|...+.
T Consensus 26 ~Yl~~A~~a~~~G~~~iA~~f~~~A~ 51 (191)
T 1lko_A 26 RYNYFGGQAKKDGFVQISDIFAETAD 51 (191)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCcHHHHHHHHHHHH
Confidence 33456677777787777777766554
No 194
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=37.90 E-value=19 Score=30.25 Aligned_cols=54 Identities=19% Similarity=0.535 Sum_probs=30.2
Q ss_pred ceeccccccccCC-------------CCCCeeccCchhhhHHH-HHHHHh--cCCCccccCCCCCcCCcc
Q 016792 322 IFVCPVSKEQTSD-------------DNPPMIMSCGHVLCRQS-INKMSK--NHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 322 ~~~Cpi~~~~~~~-------------~Npp~~l~cGhv~~~~~-l~~l~~--~~~~~~kCP~c~~~~~~~ 375 (382)
.|.|++|+..+.. +.|...--||-.+.... |..=.+ .+...++||+|++.|...
T Consensus 77 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 146 (190)
T 2i13_A 77 PYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSRE 146 (190)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCH
T ss_pred CccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCH
Confidence 3677777665431 23333356777665443 333221 233468999999887654
No 195
>1xou_B Z5138 gene product; coiled coil, helix bundle, heterodimer, structural protein/chaperone complex; 2.80A {Escherichia coli} SCOP: a.231.1.2
Probab=37.69 E-value=1.2e+02 Score=22.28 Aligned_cols=63 Identities=24% Similarity=0.306 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhc---CCCChHHHHHHHHHHHHhhhhhhhhHhhHHHHHHHHHHHHHHHhhc
Q 016792 24 TQEVIDLIVQEIEKALETVKSA---SHLDDKYVLTELKRRLQDIAPLGQLEGTQKELNIALSKYTKILEKS 91 (382)
Q Consensus 24 ~~~~id~~~~~l~~~~~~~~~~---~~~~~~~~l~~l~~~~~~~~~~~~~~~~~k~~~~~~~k~~k~idk~ 91 (382)
-.+.|.++|.+..-.++.++.. .-.|| ++-..|.+.|+. . .--...|-+++++||+.|.|+..
T Consensus 20 eie~ikkiiaefdvvke~v~~l~ekakt~p-qaae~ln~lieg---y-t~geerklydsalskieklietm 85 (95)
T 1xou_B 20 EIEAIKKIIAEFDVVKESVNELSEKAKTDP-QAAEKLNKLIEG---Y-TYGEERKLYDSALSKIEKLIETL 85 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHH---H-HHSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCH-HHHHHHHHHHHh---h-cchhHHHHHHHHHHHHHHHHHhh
Confidence 3455555555555555444321 11122 222334443331 1 12234677899999999999854
No 196
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.55 E-value=15 Score=22.16 Aligned_cols=16 Identities=13% Similarity=0.621 Sum_probs=12.9
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 9 k~~~C~~C~k~f~~~~ 24 (42)
T 2yte_A 9 KPYSCAECKETFSDNN 24 (42)
T ss_dssp CSCBCTTTCCBCSSHH
T ss_pred CCeECCCCCCccCCHH
Confidence 3689999999987654
No 197
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.55 E-value=15 Score=22.82 Aligned_cols=16 Identities=19% Similarity=0.559 Sum_probs=12.9
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2enf_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSCBCSSSCCBCSSHH
T ss_pred cCeECCCCCcccCCHH
Confidence 4699999999987654
No 198
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=37.00 E-value=14 Score=25.86 Aligned_cols=22 Identities=18% Similarity=0.255 Sum_probs=17.3
Q ss_pred HHHHHHHH--cCChHHHHHHHHhc
Q 016792 151 YQILEAMK--SGNLEPALKWAAAN 172 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n 172 (382)
..++.+|+ +||++.|++|+-.+
T Consensus 33 ~~~~~AL~~~~gnve~Ave~L~~~ 56 (58)
T 1wr1_B 33 DRNVAALRRSGGSVQGALDSLLNG 56 (58)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhC
Confidence 35577776 69999999998654
No 199
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A
Probab=36.97 E-value=14 Score=24.50 Aligned_cols=21 Identities=19% Similarity=0.260 Sum_probs=16.2
Q ss_pred HHHHHHHH--cCChHHHHHHHHh
Q 016792 151 YQILEAMK--SGNLEPALKWAAA 171 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~ 171 (382)
..++.+|+ +||++.|++|+-.
T Consensus 23 ~~~~~AL~~~~gnv~~Ave~L~~ 45 (46)
T 2bwb_A 23 DRNVAALRRSGGSVQGALDSLLN 45 (46)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHc
Confidence 35567776 6999999999753
No 200
>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=36.88 E-value=14 Score=25.52 Aligned_cols=22 Identities=23% Similarity=0.347 Sum_probs=17.4
Q ss_pred HHHHHHH--cCChHHHHHHHHhcc
Q 016792 152 QILEAMK--SGNLEPALKWAAANS 173 (382)
Q Consensus 152 ~I~~~L~--~gdl~~Al~W~~~n~ 173 (382)
..+.+|+ +||++.|++|+-.+.
T Consensus 26 ~n~~AL~~~~Gdv~~Ave~L~~~~ 49 (54)
T 2dah_A 26 ANLQALIATGGDVDAAVEKLRQSS 49 (54)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCHHHHHHHHHhCC
Confidence 4566776 799999999997663
No 201
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=36.65 E-value=2.4e+02 Score=25.55 Aligned_cols=101 Identities=12% Similarity=0.052 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHhC-C----CcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCC--c
Q 016792 110 VSQIIASHFYRQGLFEVGDCFISETK-E----SECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGS--D 182 (382)
Q Consensus 110 lnrlI~~hLlR~G~~e~a~~f~~Es~-~----~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s--~ 182 (382)
..-..+.++.+.|.++.|..+.+++- + .. +......+..+..+. ...|+.+.|++++.+--....+.+. .
T Consensus 105 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~a~~~~~lg~~~--~~~~~~~~A~~~~~~al~~~~~~~~~~~ 181 (383)
T 3ulq_A 105 FNFFRGMYELDQREYLSAIKFFKKAESKLIFVKD-RIEKAEFFFKMSESY--YYMKQTYFSMDYARQAYEIYKEHEAYNI 181 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCC-HHHHHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHHHTCSTTHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHhCccchH
Confidence 34457888999999999888877652 2 11 122223333332222 2379999999999876544444332 1
Q ss_pred hhhhchHHHHHHHHHcCCHHHHHHHHHHhcC
Q 016792 183 LQLKLHSLQFVEILRKGSREEALKYARANLA 213 (382)
Q Consensus 183 LeF~L~~q~fIeLl~~~~~~eAl~yar~~l~ 213 (382)
.....+..--.-....|+..+|+.|.++-+.
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 212 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYS 212 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 1111111112223456888888888876553
No 202
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.47 E-value=16 Score=22.71 Aligned_cols=16 Identities=19% Similarity=0.559 Sum_probs=12.9
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2yti_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CTTCCSSSCCCCSSHH
T ss_pred cCeECCCCCcccCChh
Confidence 4689999999987654
No 203
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=36.45 E-value=2.4 Score=40.25 Aligned_cols=11 Identities=27% Similarity=0.709 Sum_probs=9.3
Q ss_pred CccccCCCCCc
Q 016792 361 RTFKCPYCPSD 371 (382)
Q Consensus 361 ~~~kCP~c~~~ 371 (382)
.+.+||+|+.+
T Consensus 221 ~R~~C~~Cg~~ 231 (309)
T 2fiy_A 221 VRIKCSHCEES 231 (309)
T ss_dssp CTTSCSSSCCC
T ss_pred cCcCCcCCCCC
Confidence 37899999987
No 204
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=36.31 E-value=29 Score=24.67 Aligned_cols=23 Identities=39% Similarity=0.465 Sum_probs=18.7
Q ss_pred HHHHHHHH--cCChHHHHHHHHhcc
Q 016792 151 YQILEAMK--SGNLEPALKWAAANS 173 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n~ 173 (382)
.+.+.+|+ +||++.|++|+=.|-
T Consensus 34 ~qA~kALKat~~NvErAaDWLFSH~ 58 (63)
T 1wgn_A 34 ECVLRAMKKKGENIEQILDYLFAHS 58 (63)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 46677887 699999999997763
No 205
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=36.26 E-value=11 Score=25.18 Aligned_cols=10 Identities=30% Similarity=0.634 Sum_probs=7.6
Q ss_pred cceecccccc
Q 016792 321 SIFVCPVSKE 330 (382)
Q Consensus 321 S~~~Cpi~~~ 330 (382)
.++.||.|+.
T Consensus 4 ~~~~CP~C~~ 13 (50)
T 1pft_A 4 KQKVCPACES 13 (50)
T ss_dssp SCCSCTTTSC
T ss_pred ccEeCcCCCC
Confidence 3678999876
No 206
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.23 E-value=11 Score=22.09 Aligned_cols=16 Identities=13% Similarity=0.474 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 8 k~~~C~~C~k~f~~~~ 23 (36)
T 2elv_A 8 LLYDCHICERKFKNEL 23 (36)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCeECCCCCCccCCHH
Confidence 3689999999887543
No 207
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=35.85 E-value=8.5 Score=22.10 Aligned_cols=15 Identities=33% Similarity=0.941 Sum_probs=11.1
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|+.|++.|....
T Consensus 2 p~~C~~C~k~f~~~~ 16 (32)
T 2kfq_A 2 AFACPACPKRFMRSD 16 (32)
T ss_dssp CSSSSSSCTTHHHHH
T ss_pred CCCCCCCCcccCCHH
Confidence 478999998876543
No 208
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=35.53 E-value=29 Score=22.59 Aligned_cols=14 Identities=29% Similarity=0.396 Sum_probs=11.6
Q ss_pred CccccCCCCCcCCc
Q 016792 361 RTFKCPYCPSDIDA 374 (382)
Q Consensus 361 ~~~kCP~c~~~~~~ 374 (382)
..++|++|++.|.-
T Consensus 40 k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 40 RPHKCQVWVSGPSS 53 (54)
T ss_dssp CCCCSSSSCCSSCC
T ss_pred CCccCCCCCCCCCC
Confidence 46999999998863
No 209
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=35.47 E-value=15 Score=28.57 Aligned_cols=16 Identities=0% Similarity=-0.170 Sum_probs=12.5
Q ss_pred ccccCCCCCcCCcccc
Q 016792 362 TFKCPYCPSDIDAAQC 377 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~~ 377 (382)
...||.|+..|-..+=
T Consensus 53 ~LvC~~c~~~YPI~dG 68 (97)
T 2k5r_A 53 ALITRDRKQVFRIEDS 68 (97)
T ss_dssp EEECTTSCEEEEEETT
T ss_pred eEEcCCCCCCccccCC
Confidence 5789999988876653
No 210
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=35.42 E-value=28 Score=24.06 Aligned_cols=21 Identities=29% Similarity=0.441 Sum_probs=15.0
Q ss_pred HHHHHHH-cCC--hHHHHHHHHhc
Q 016792 152 QILEAMK-SGN--LEPALKWAAAN 172 (382)
Q Consensus 152 ~I~~~L~-~gd--l~~Al~W~~~n 172 (382)
+...+|+ .|+ +++|++|+..-
T Consensus 25 rae~Alk~Tg~~Gle~AmewL~k~ 48 (54)
T 2cos_A 25 MAGRALKQTGSRSIEAALEYISKM 48 (54)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccHHHHHHHHHHh
Confidence 4455666 355 99999999764
No 211
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=35.41 E-value=18 Score=27.28 Aligned_cols=15 Identities=13% Similarity=0.534 Sum_probs=10.8
Q ss_pred CccccCCCCCcCCcc
Q 016792 361 RTFKCPYCPSDIDAA 375 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~ 375 (382)
..++|++|++.|...
T Consensus 68 ~~~~C~~C~~~f~~~ 82 (107)
T 1wjp_A 68 KKLTCLECMRTFKSS 82 (107)
T ss_dssp GGGEEGGGTEECSSH
T ss_pred CCccCccccchhCCH
Confidence 358888888877653
No 212
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.31 E-value=8.7 Score=22.89 Aligned_cols=15 Identities=13% Similarity=0.359 Sum_probs=12.0
Q ss_pred CccccCCCCCcCCcc
Q 016792 361 RTFKCPYCPSDIDAA 375 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~ 375 (382)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (37)
T 2elm_A 8 HLYYCSQCHYSSITK 22 (37)
T ss_dssp CEEECSSSSCEEECH
T ss_pred cCeECCCCCcccCCH
Confidence 368999999988654
No 213
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=35.18 E-value=1.4e+02 Score=22.29 Aligned_cols=105 Identities=11% Similarity=-0.084 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHH--HHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCc-hhh
Q 016792 109 TVSQIIASHFYRQGLFEVGDCFISETKESECSAAILS--IFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSD-LQL 185 (382)
Q Consensus 109 ~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~--~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~-LeF 185 (382)
.+...++..+...|.++.|....+++-.......... ...-...-.-....|+.+.|++++++--......+.. ...
T Consensus 10 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 89 (164)
T 3ro3_A 10 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEA 89 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 4556778888899998888777665421100000000 0111112222345799999999998765444433221 112
Q ss_pred hchHHHHHHHHHcCCHHHHHHHHHHhcC
Q 016792 186 KLHSLQFVEILRKGSREEALKYARANLA 213 (382)
Q Consensus 186 ~L~~q~fIeLl~~~~~~eAl~yar~~l~ 213 (382)
..+..--.-....|+..+|+.|.++-+.
T Consensus 90 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 117 (164)
T 3ro3_A 90 QSCYSLGNTYTLLQDYEKAIDYHLKHLA 117 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 2222222334467889999988886553
No 214
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.89 E-value=15 Score=22.41 Aligned_cols=16 Identities=13% Similarity=0.530 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2en7_A 11 KPYVCNECGKAFRSKS 26 (44)
T ss_dssp SSSCCTTTCCCCSSHH
T ss_pred cCeECCCCCCccCCHH
Confidence 3689999999987654
No 215
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.59 E-value=16 Score=22.71 Aligned_cols=16 Identities=25% Similarity=0.650 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eq1_A 11 KPYKCNECGKAFRAHS 26 (46)
T ss_dssp CCCCCTTTTCCCSSHH
T ss_pred CCeECCcCChhhCCHH
Confidence 4699999999987643
No 216
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=34.47 E-value=2.4e+02 Score=27.01 Aligned_cols=93 Identities=10% Similarity=0.030 Sum_probs=48.7
Q ss_pred HHHHHHHHHhhhhhchhhhHHHHHHHH-HHHHHHHHHHhhc-----------CCCChHHHHHHHHHHHHhhhhhhhhHhh
Q 016792 6 IKDAFDRVAKKQKLSCSKTQEVIDLIV-QEIEKALETVKSA-----------SHLDDKYVLTELKRRLQDIAPLGQLEGT 73 (382)
Q Consensus 6 ~~~~~~~~~~k~~~~~~~~~~~id~~~-~~l~~~~~~~~~~-----------~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 73 (382)
+.++..+..|+......++++.+.+.+ ..|+.++..-... ...+...-+.+++.+..+ ...++...
T Consensus 106 ~~ke~~~~rK~~~~~~~klqk~~~k~~~~~lekaKk~Y~~~cke~e~A~~k~~~~~k~ke~eK~~~k~~k--~~~~~~~a 183 (406)
T 4dyl_A 106 LIRERQQLRKTYSEQWQQLQQELTKTHSQDIEKLKSQYRALARDSAQAKRKYQEASKDKDRDKAKDKYVR--SLWKLFAH 183 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCC---------CHHHHHHHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHH--HHHHHHHH
Confidence 445555555565555666677777777 6666555433221 000001112333333332 34466677
Q ss_pred HHHHHHHHHHHHHHHhhcCCCChHhhh
Q 016792 74 QKELNIALSKYTKILEKSFNPDISKAY 100 (382)
Q Consensus 74 ~k~~~~~~~k~~k~idk~f~~~l~~~~ 100 (382)
+++|..+|..+-+..++.|..+++.++
T Consensus 184 ~neY~~~l~~~N~~~~~yy~~~lp~~~ 210 (406)
T 4dyl_A 184 HNRYVLGVRAAQLHHQHHHQLLLPGLL 210 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 777777777777776666665555543
No 217
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=34.28 E-value=2.2e+02 Score=27.44 Aligned_cols=25 Identities=24% Similarity=0.235 Sum_probs=11.6
Q ss_pred hHHHHHHHHHHHHHHHcCChHHHHH
Q 016792 143 ILSIFEDMYQILEAMKSGNLEPALK 167 (382)
Q Consensus 143 ~~~~f~~~~~I~~~L~~gdl~~Al~ 167 (382)
+++.+.+..+-+..+...|+.|.++
T Consensus 177 D~e~ye~qqKQL~qv~a~~llP~~~ 201 (390)
T 1deq_A 177 DLEDYKNQQKQLEQVIAINLLPSRD 201 (390)
T ss_pred cHHHHHHHHHHHHhhhhhccccccc
Confidence 3444444444444444555555444
No 218
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=34.22 E-value=38 Score=27.09 Aligned_cols=54 Identities=19% Similarity=0.548 Sum_probs=32.3
Q ss_pred eeccccccccCC------------CCCCeecc---CchhhhHHH-HHHHHhc--CCCccccCC--CCCcCCccc
Q 016792 323 FVCPVSKEQTSD------------DNPPMIMS---CGHVLCRQS-INKMSKN--HSRTFKCPY--CPSDIDAAQ 376 (382)
Q Consensus 323 ~~Cpi~~~~~~~------------~Npp~~l~---cGhv~~~~~-l~~l~~~--~~~~~kCP~--c~~~~~~~~ 376 (382)
+.|++|+..+.. ...|+.=+ ||-.+.... |..-.+. +...++|++ |++.|....
T Consensus 63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~ 136 (155)
T 2rpc_A 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSS 136 (155)
T ss_dssp TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHH
T ss_pred cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHH
Confidence 678888776532 22344433 888886543 3332222 224699998 999887543
No 219
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=34.16 E-value=20 Score=22.22 Aligned_cols=16 Identities=25% Similarity=0.638 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ely_A 11 KPFKCVECGKGFSRRS 26 (46)
T ss_dssp CSBCCSSSCCCBSSTT
T ss_pred CCcccCccCcccCCHH
Confidence 3689999999887654
No 220
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=34.04 E-value=13 Score=22.51 Aligned_cols=16 Identities=13% Similarity=0.598 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 9 k~~~C~~C~k~f~~~~ 24 (42)
T 2el5_A 9 NPYECSECGKAFNRKD 24 (42)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCccCCCcChhhCCHH
Confidence 4699999999887543
No 221
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.99 E-value=18 Score=22.36 Aligned_cols=16 Identities=13% Similarity=0.528 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ep1_A 11 KPYECSDCGKSFIKKS 26 (46)
T ss_dssp CSSCCSSSCCCCSSHH
T ss_pred CCcCCCCCCchhCCHH
Confidence 4699999999987543
No 222
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=33.97 E-value=13 Score=28.28 Aligned_cols=51 Identities=20% Similarity=0.427 Sum_probs=39.5
Q ss_pred ccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcc
Q 016792 318 QFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 318 ~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~ 375 (382)
.|| .-|.|..|+..++. .++....|.+||+.+..++. ..+|..|.+.+...
T Consensus 28 ~~H~~CF~C~~C~~~L~~--~~~~~~~g~~yC~~cy~~~~-----~~~C~~C~~~I~~~ 79 (101)
T 2cup_A 28 FWHDTCFRCAKCLHPLAN--ETFVAKDNKILCNKCTTRED-----SPKCKGCFKAIVAG 79 (101)
T ss_dssp EEETTTCCCSSSCCCTTS--SCCEEETTEEECHHHHTTCC-----CCBCSSSCCBCCSS
T ss_pred ChhhcCCcccccCCCCCc--CeeECcCCEEEChhHhhhhc-----CCccccCCCccccC
Confidence 566 46999999998853 46778899999999886442 35999999888754
No 223
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=33.83 E-value=2.7e+02 Score=25.23 Aligned_cols=101 Identities=10% Similarity=0.064 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHhC-C----CcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCC-ch
Q 016792 110 VSQIIASHFYRQGLFEVGDCFISETK-E----SECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGS-DL 183 (382)
Q Consensus 110 lnrlI~~hLlR~G~~e~a~~f~~Es~-~----~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s-~L 183 (382)
....++.-+.+.|.++.|....+++- + .. .......+..+..+ ....|+.+.|++++++--....+.+. +-
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~lg~~--y~~~g~~~~A~~~~~~al~~~~~~~~~~~ 262 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ-PQLMGRTLYNIGLC--KNSQSQYEDAIPYFKRAIAVFEESNILPS 262 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC-hHHHHHHHHHHHHH--HHHCCCHHHHHHHHHHHHHHHHhhccchh
Confidence 44567788888999888877665541 1 11 11111222222222 23479999999999876544333333 33
Q ss_pred hhhchHHHHHHHHHcCCHHHHHHHHHHhcC
Q 016792 184 QLKLHSLQFVEILRKGSREEALKYARANLA 213 (382)
Q Consensus 184 eF~L~~q~fIeLl~~~~~~eAl~yar~~l~ 213 (382)
.......--.-..+.|+..+|+.|.++-+.
T Consensus 263 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 292 (383)
T 3ulq_A 263 LPQAYFLITQIHYKLGKIDKAHEYHSKGMA 292 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 333333333445567999999999987654
No 224
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.83 E-value=17 Score=22.60 Aligned_cols=16 Identities=19% Similarity=0.447 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2emg_A 11 NPFICSECGKVFTHKT 26 (46)
T ss_dssp CSCBCTTTCCBCSSHH
T ss_pred CCEECCccCcccCCHH
Confidence 3699999999987643
No 225
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.59 E-value=17 Score=22.66 Aligned_cols=16 Identities=13% Similarity=0.484 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eoh_A 11 KPYECKECRKTFIQIG 26 (46)
T ss_dssp CSCCCSSSCCCCSSHH
T ss_pred CCcCCCCcCchhCCHH
Confidence 3689999999987643
No 226
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.52 E-value=17 Score=22.69 Aligned_cols=16 Identities=13% Similarity=0.603 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2enh_A 11 KPYECDVCRKAFSHHA 26 (46)
T ss_dssp SSCBCTTTCCBCSSSH
T ss_pred CCcCCCCcCchhCCHH
Confidence 3689999999987654
No 227
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.44 E-value=14 Score=22.44 Aligned_cols=16 Identities=19% Similarity=0.598 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 10 k~~~C~~C~k~f~~~~ 25 (42)
T 2en2_A 10 KPYKCETCGARFVQVA 25 (42)
T ss_dssp CSEECTTTCCEESSHH
T ss_pred CCEeCCCcChhhCCHH
Confidence 4699999999887543
No 228
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.44 E-value=19 Score=22.35 Aligned_cols=16 Identities=19% Similarity=0.740 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2em6_A 11 KCYKCDVCGKEFSQSS 26 (46)
T ss_dssp CCCBCSSSCCBCSSHH
T ss_pred CCeECCCCCcccCCHH
Confidence 4699999999987543
No 229
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.33 E-value=19 Score=22.33 Aligned_cols=16 Identities=31% Similarity=0.690 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2emz_A 11 RPFKCNECGKGFGRRS 26 (46)
T ss_dssp CSCCCSSSCCCCSSHH
T ss_pred CCeECCCCCcccCCHH
Confidence 4699999999987654
No 230
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.29 E-value=14 Score=22.69 Aligned_cols=16 Identities=25% Similarity=0.605 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2yu5_A 11 NPFKCSKCDRVFTQRN 26 (44)
T ss_dssp CSEECSSSSCEESSSH
T ss_pred CCeECCCCCchhCCHH
Confidence 3689999999887654
No 231
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=33.29 E-value=1.1e+02 Score=22.16 Aligned_cols=33 Identities=12% Similarity=0.269 Sum_probs=18.8
Q ss_pred HHHHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhh
Q 016792 8 DAFDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKS 44 (382)
Q Consensus 8 ~~~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~ 44 (382)
++++.+++..+. ....|+..++.|......|..
T Consensus 12 e~l~~~A~~~~~----~~~~i~~~l~~L~~~~~~L~~ 44 (93)
T 4ioe_A 12 EELERIAGNFKN----AAGEAQSQINRLEGDINSLEG 44 (93)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHh
Confidence 455666666555 445566666666655555543
No 232
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.19 E-value=14 Score=22.26 Aligned_cols=16 Identities=19% Similarity=0.609 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 9 k~~~C~~C~k~f~~~~ 24 (41)
T 2ept_A 9 RVYECQECGKSFRQKG 24 (41)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCeECCCCCCCcCCHH
Confidence 4689999999887543
No 233
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.07 E-value=34 Score=24.14 Aligned_cols=11 Identities=9% Similarity=0.368 Sum_probs=7.3
Q ss_pred ceecccccccc
Q 016792 322 IFVCPVSKEQT 332 (382)
Q Consensus 322 ~~~Cpi~~~~~ 332 (382)
.|.|++|+..+
T Consensus 15 ~~~C~~C~~~f 25 (86)
T 1x6h_A 15 PYACSHCDKTF 25 (86)
T ss_dssp CEECSSSSCEE
T ss_pred CCcCCCCCCcc
Confidence 46788776644
No 234
>4a18_Q RPL36, 60S ribosomal protein L36; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_Q 4a1b_Q 4a1d_Q
Probab=33.07 E-value=72 Score=25.01 Aligned_cols=43 Identities=19% Similarity=0.280 Sum_probs=32.7
Q ss_pred chHHHHHHHHHcCC---HHHHHHHHHHhcCCch--hhhHHHHHHHHHh
Q 016792 187 LHSLQFVEILRKGS---REEALKYARANLAPFA--SNHVNEIQKLMAC 229 (382)
Q Consensus 187 L~~q~fIeLl~~~~---~~eAl~yar~~l~~f~--~~~~~eiq~lm~~ 229 (382)
=+.-..+|||+.|+ ...|+.|+++-+..+. ....+|++.+.+.
T Consensus 53 PYErR~mELLKvsk~~~dKRAlKf~KKRlGth~RAKrKreel~~vl~~ 100 (104)
T 4a18_Q 53 PYEKRIIELIKAGSAKDSKKATKIARKRLGTHRRAKVKKALLEEAVRA 100 (104)
T ss_dssp HHHHHHHHHHHHCSHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHcccchhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 34457899999999 7899999999998874 3455677766553
No 235
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=32.99 E-value=1.6e+02 Score=26.78 Aligned_cols=96 Identities=14% Similarity=0.110 Sum_probs=0.0
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHH--cCChHHHHHHHHhcchHhh-hcCCchhhhchH
Q 016792 113 IIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMK--SGNLEPALKWAAANSDKLT-QNGSDLQLKLHS 189 (382)
Q Consensus 113 lI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~--~gdl~~Al~W~~~n~~~L~-~~~s~LeF~L~~ 189 (382)
.++..+++.|.++.|..+.+++--.. +............+-.+. .|+++.|++++++--.... ..+.......+.
T Consensus 53 ~~g~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 130 (411)
T 4a1s_A 53 LEGERLCNAGDCRAGVAFFQAAIQAG--TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSG 130 (411)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC--CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHhc--ccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHH
Q ss_pred HHHHHHHHcCCHHHHHHHHHH
Q 016792 190 LQFVEILRKGSREEALKYARA 210 (382)
Q Consensus 190 q~fIeLl~~~~~~eAl~yar~ 210 (382)
.--.-+...|+..+|+.+.++
T Consensus 131 ~l~~~~~~~g~~~~A~~~~~~ 151 (411)
T 4a1s_A 131 NLGNTLKVMGRFDEAAICCER 151 (411)
T ss_dssp HHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHH
No 236
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.96 E-value=39 Score=22.15 Aligned_cols=22 Identities=18% Similarity=0.329 Sum_probs=16.5
Q ss_pred HHHHHHHH-cCChHHHHHHHHhc
Q 016792 151 YQILEAMK-SGNLEPALKWAAAN 172 (382)
Q Consensus 151 ~~I~~~L~-~gdl~~Al~W~~~n 172 (382)
.+.+.+|+ .||++.|++|+-.|
T Consensus 24 ~~a~~AL~~~~n~e~A~~~L~~h 46 (47)
T 2ekk_A 24 EHAMEALLNTSTMEQATEYLLTH 46 (47)
T ss_dssp HHHHHHHHHSCSHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHcC
Confidence 35566666 47999999998765
No 237
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.85 E-value=17 Score=22.54 Aligned_cols=16 Identities=13% Similarity=0.607 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eq2_A 11 KPYQCNECGKAFSQTS 26 (46)
T ss_dssp CSSSCCSSCCCCSSHH
T ss_pred CCeECCCCCcccCCHH
Confidence 3699999999987643
No 238
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=32.84 E-value=39 Score=20.17 Aligned_cols=23 Identities=26% Similarity=0.406 Sum_probs=15.3
Q ss_pred hhHhhHHHHHHHHHHHHHHHhhc
Q 016792 69 QLEGTQKELNIALSKYTKILEKS 91 (382)
Q Consensus 69 ~~~~~~k~~~~~~~k~~k~idk~ 91 (382)
+++...+.++..+.+..|++|++
T Consensus 3 rlee~~r~l~~ivq~lq~r~drl 25 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLDRL 25 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666777777777777754
No 239
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.64 E-value=18 Score=22.51 Aligned_cols=16 Identities=25% Similarity=0.679 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2en9_A 11 KLFKCNECKKTFTQSS 26 (46)
T ss_dssp CCCBCTTTCCBCSSHH
T ss_pred CCEECCccCcccCCHH
Confidence 3699999999987543
No 240
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.60 E-value=18 Score=22.59 Aligned_cols=16 Identities=19% Similarity=0.690 Sum_probs=12.9
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eon_A 11 KPYKCQVCGKAFRVSS 26 (46)
T ss_dssp CSCBCSSSCCBCSSHH
T ss_pred cccCCCCCCcccCcHH
Confidence 4689999999987654
No 241
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.46 E-value=21 Score=22.06 Aligned_cols=16 Identities=13% Similarity=0.447 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2eop_A 11 KPHECRECGKSFSFNS 26 (46)
T ss_dssp CSCBCTTTCCBCSSHH
T ss_pred CCeeCCCCCchhCCHH
Confidence 4689999999987643
No 242
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.46 E-value=15 Score=22.43 Aligned_cols=16 Identities=13% Similarity=0.661 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2eof_A 11 KPYECNECQKAFNTKS 26 (44)
T ss_dssp CSEECTTTCCEESCHH
T ss_pred CCeECCCCCcccCCHh
Confidence 3699999999887543
No 243
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.43 E-value=20 Score=22.14 Aligned_cols=16 Identities=19% Similarity=0.582 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2eov_A 11 KPYKCSDCGKSFTWKS 26 (46)
T ss_dssp CSCBCSSSCCBCSSHH
T ss_pred CCccCCccChhhCCHH
Confidence 3689999999987643
No 244
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=32.41 E-value=2.4e+02 Score=24.24 Aligned_cols=96 Identities=18% Similarity=0.168 Sum_probs=50.5
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCc----hhhhch
Q 016792 113 IIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSD----LQLKLH 188 (382)
Q Consensus 113 lI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~----LeF~L~ 188 (382)
.++..+.+.|.++.|....+++-... +.....+..+. .-....|+++.|+.++++--....+.+.. -....+
T Consensus 164 ~l~~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~l~--~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 239 (330)
T 3hym_B 164 YIGLEYGLTNNSKLAERFFSQALSIA--PEDPFVMHEVG--VVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLL 239 (330)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTC--TTCHHHHHHHH--HHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhC--CCChHHHHHHH--HHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHH
Confidence 36677777787777777766652222 12222222222 22335788888888887654333221111 111222
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHhc
Q 016792 189 SLQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 189 ~q~fIeLl~~~~~~eAl~yar~~l 212 (382)
..--.-+.+.|+..+|+.+.++-+
T Consensus 240 ~~la~~~~~~g~~~~A~~~~~~a~ 263 (330)
T 3hym_B 240 NNLGHVCRKLKKYAEALDYHRQAL 263 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHH
Confidence 222333456788888888887654
No 245
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=32.20 E-value=1.4e+02 Score=27.24 Aligned_cols=104 Identities=15% Similarity=0.092 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHH--HHhCcHHHHHHHHHH-----hCCCcchhhhHHHHHHHHHHHHHHHcCChHHHH---------HH
Q 016792 105 FDTHTVSQIIASHF--YRQGLFEVGDCFISE-----TKESECSAAILSIFEDMYQILEAMKSGNLEPAL---------KW 168 (382)
Q Consensus 105 ~~~~~lnrlI~~hL--lR~G~~e~a~~f~~E-----s~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al---------~W 168 (382)
.....|...|-+.- ++.+.++.|..+.+| ..++. ....-.|-.+-..+..+..+++.++. +.
T Consensus 7 ~~~~~v~~~l~~wy~~i~~~~~~~A~~l~~~i~~~~~~~~~--~~~~~~yy~l~~~r~~~~~~~~~~~~~~~~~~~~~~~ 84 (378)
T 3q15_A 7 IPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEE--DQDLLIYYSLMCFRHQLMLDYLEPGKTYGNRPTVTEL 84 (378)
T ss_dssp BCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGBCC--CHHHHHHHHHHHHHHHHHHHTCCC--------CHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHhhcCcccccccccchHHH
Q ss_pred HHhcchHhhhcCCchhhhchHHHHHHHHHcCCHHHHHHHHHH
Q 016792 169 AAANSDKLTQNGSDLQLKLHSLQFVEILRKGSREEALKYARA 210 (382)
Q Consensus 169 ~~~n~~~L~~~~s~LeF~L~~q~fIeLl~~~~~~eAl~yar~ 210 (382)
++.....-...+..+.+..+...-+.....|+..+|+.+.++
T Consensus 85 l~~i~~~~~~~~~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~ 126 (378)
T 3q15_A 85 LETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYRE 126 (378)
T ss_dssp HHHHHGGGHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHhccCCCCccHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
No 246
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=32.19 E-value=18 Score=26.64 Aligned_cols=22 Identities=18% Similarity=0.296 Sum_probs=17.7
Q ss_pred HHHHHHHH--cCChHHHHHHHHhc
Q 016792 151 YQILEAMK--SGNLEPALKWAAAN 172 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n 172 (382)
..++.+|+ +||++.|++|+-.+
T Consensus 45 ~~~~~AL~~t~Gnve~Ave~L~~~ 68 (74)
T 1vej_A 45 DANLQALVATDGDIHAAIEMLLGA 68 (74)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhC
Confidence 45577776 69999999999765
No 247
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.18 E-value=19 Score=21.86 Aligned_cols=16 Identities=19% Similarity=0.627 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 10 k~~~C~~C~k~f~~~~ 25 (42)
T 2eos_A 10 KPYPCEICGTRFRHLQ 25 (42)
T ss_dssp CCBCCSSSCCCBSSHH
T ss_pred CCEECCCCCCccCCHH
Confidence 4689999999987643
No 248
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=32.15 E-value=42 Score=21.46 Aligned_cols=21 Identities=19% Similarity=0.271 Sum_probs=15.6
Q ss_pred HHHHHHH--cCChHHHHHHHHhc
Q 016792 152 QILEAMK--SGNLEPALKWAAAN 172 (382)
Q Consensus 152 ~I~~~L~--~gdl~~Al~W~~~n 172 (382)
+.+.+|+ +||++.|++|+-.|
T Consensus 20 ~a~~AL~~~~~n~e~A~~~L~~~ 42 (43)
T 2g3q_A 20 EAHNALEKCNWDLEAATNFLLDS 42 (43)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHTC
T ss_pred HHHHHHHHhCcCHHHHHHHHHcC
Confidence 3455555 68999999998654
No 249
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=32.13 E-value=1.7e+02 Score=22.29 Aligned_cols=93 Identities=9% Similarity=0.058 Sum_probs=56.3
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHH
Q 016792 111 SQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSL 190 (382)
Q Consensus 111 nrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q 190 (382)
.+-.+.-+++.|.++.|....+++=. . ++.....+..+..+ ....|+++.|+++++.- +.-..... ..+..
T Consensus 16 ~~~~G~~~~~~g~~~~A~~~~~~al~-~-~p~~~~~~~~~~~~--~~~~~~~~~A~~~~~~a---l~~~p~~~--~a~~~ 86 (126)
T 4gco_A 16 EKNKGNEYFKKGDYPTAMRHYNEAVK-R-DPENAILYSNRAAC--LTKLMEFQRALDDCDTC---IRLDSKFI--KGYIR 86 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH-H-CTTCHHHHHHHHHH--HHHTTCHHHHHHHHHHH---HHHCTTCH--HHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH-h-CCCCHHHHHHHhhH--HHhhccHHHHHHHHHHH---HHhhhhhh--HHHHH
Confidence 34468889999999888777665421 1 12333334333332 34579999999998763 22212222 22333
Q ss_pred HHHHHHHcCCHHHHHHHHHHhc
Q 016792 191 QFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 191 ~fIeLl~~~~~~eAl~yar~~l 212 (382)
.-.-+...|+..+|+.+.++-+
T Consensus 87 lg~~~~~~~~~~~A~~~~~~al 108 (126)
T 4gco_A 87 KAACLVAMREWSKAQRAYEDAL 108 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHH
Confidence 3444566789999999988654
No 250
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.11 E-value=18 Score=22.57 Aligned_cols=16 Identities=25% Similarity=0.422 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2eom_A 11 RGHRCSDCGKFFLQAS 26 (46)
T ss_dssp SSCCCSSSCCCCSSHH
T ss_pred CCcCCCCCCCeeCChH
Confidence 3689999999987643
No 251
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=32.04 E-value=9.7 Score=36.28 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHHhCcHHHHHHHHHHhCCCc
Q 016792 106 DTHTVSQIIASHFYRQGLFEVGDCFISETKESE 138 (382)
Q Consensus 106 ~~~~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~ 138 (382)
.++.++|+|++||..+||.+++..|.+|.++..
T Consensus 7 q~~~~~~~i~~~l~~~~~~~~~~~~~~e~~~~~ 39 (410)
T 1vyh_C 7 QRDELNRAIADYLRSNGYEEAYSVFKKEAELDM 39 (410)
T ss_dssp ---------------------------------
T ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHhCCCC
Confidence 356899999999999999999999999998754
No 252
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.82 E-value=21 Score=22.07 Aligned_cols=16 Identities=13% Similarity=0.453 Sum_probs=12.9
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (47)
T 2epx_A 11 KPYECIECGKAFIQNT 26 (47)
T ss_dssp CSBCCSSSCCCBSSHH
T ss_pred CCEECCccCchhCChH
Confidence 4699999999987654
No 253
>3f6n_A Virion-associated protein; coiled-coil, viral protein, tetramer, DNA-binding, D binding protein; 3.10A {Cauliflower mosaic virus}
Probab=31.76 E-value=2e+02 Score=23.09 Aligned_cols=19 Identities=26% Similarity=0.391 Sum_probs=11.9
Q ss_pred CCchHHHHHHHHHHhhhhh
Q 016792 1 MELNDIKDAFDRVAKKQKL 19 (382)
Q Consensus 1 ~~~~~~~~~~~~~~~k~~~ 19 (382)
|++.+++.+++.+...++.
T Consensus 2 ~nl~~i~~ei~e~~~~i~~ 20 (129)
T 3f6n_A 2 ANLNQIQKEVSEILSDQKS 20 (129)
T ss_dssp -CHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHH
Confidence 5677777777777555444
No 254
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=31.70 E-value=15 Score=21.88 Aligned_cols=16 Identities=31% Similarity=1.014 Sum_probs=12.4
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 5 k~~~C~~C~k~f~~~~ 20 (39)
T 1njq_A 5 RSYTCSFCKREFRSAQ 20 (39)
T ss_dssp SSEECTTTCCEESSHH
T ss_pred CceECCCCCcccCCHH
Confidence 3689999999886543
No 255
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.68 E-value=18 Score=22.44 Aligned_cols=16 Identities=19% Similarity=0.625 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2yth_A 11 KPFQCEECGKRFTQNS 26 (46)
T ss_dssp SSBCCSSSCCCBSSHH
T ss_pred cCCCCCCCCcccCCHH
Confidence 3699999999987644
No 256
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=31.45 E-value=1.7e+02 Score=22.06 Aligned_cols=92 Identities=11% Similarity=-0.005 Sum_probs=53.9
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHHH
Q 016792 113 IIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQF 192 (382)
Q Consensus 113 lI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~f 192 (382)
..+.-+++.|.++.|....+.+-... +...+.+..+..+ ....|+.+.|+..++.- +.-.....+ .+..--
T Consensus 22 ~~g~~~~~~g~~~~A~~~~~~al~~~--P~~~~a~~~lg~~--~~~~g~~~~A~~~~~~a---l~l~P~~~~--~~~~la 92 (121)
T 1hxi_A 22 EEGLSMLKLANLAEAALAFEAVCQKE--PEREEAWRSLGLT--QAENEKDGLAIIALNHA---RMLDPKDIA--VHAALA 92 (121)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHH---HHHCTTCHH--HHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHH--HHHcCCHHHHHHHHHHH---HHhCCCCHH--HHHHHH
Confidence 35667889999988887776552212 2333334333333 23579999999998753 222222222 222223
Q ss_pred HHHHHcCCHHHHHHHHHHhcC
Q 016792 193 VEILRKGSREEALKYARANLA 213 (382)
Q Consensus 193 IeLl~~~~~~eAl~yar~~l~ 213 (382)
.-+...|+..+|+.+.++-+.
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 93 VSHTNEHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHHHHH
Confidence 334566788899988886543
No 257
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.44 E-value=19 Score=22.32 Aligned_cols=16 Identities=25% Similarity=0.656 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2eoq_A 11 KPFKCDICGKSFCGRS 26 (46)
T ss_dssp CSCCCSSSCCCCSSHH
T ss_pred CCcCCCcCCchhCCHH
Confidence 3699999999987543
No 258
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.44 E-value=16 Score=24.68 Aligned_cols=17 Identities=18% Similarity=0.528 Sum_probs=13.7
Q ss_pred CccccCCCCCcCCcccc
Q 016792 361 RTFKCPYCPSDIDAAQC 377 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~~ 377 (382)
+++.||.|+..|...+.
T Consensus 11 ~~~~CPrCn~~f~~~~s 27 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEA 27 (49)
T ss_dssp SCCCCTTTCCCCSSHHH
T ss_pred CceeCCcccccccchHH
Confidence 57899999999986554
No 259
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=31.32 E-value=1.9e+02 Score=22.62 Aligned_cols=95 Identities=9% Similarity=-0.089 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhch
Q 016792 109 TVSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLH 188 (382)
Q Consensus 109 ~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~ 188 (382)
..-..++..+++.|.++.|....+++-... +.....+..+.. -.+..|+++.|+++++.- +.-...+ ...+
T Consensus 12 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~--~~~~~g~~~~A~~~~~~a---l~~~p~~--~~~~ 82 (164)
T 3sz7_A 12 DKLKSEGNAAMARKEYSKAIDLYTQALSIA--PANPIYLSNRAA--AYSASGQHEKAAEDAELA---TVVDPKY--SKAW 82 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHH--HHHHTTCHHHHHHHHHHH---HHHCTTC--HHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CcCHHHHHHHHH--HHHHccCHHHHHHHHHHH---HHhCCCC--HHHH
Confidence 344567888889999988887776652111 222233333322 234579999999999764 2211111 2223
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHhc
Q 016792 189 SLQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 189 ~q~fIeLl~~~~~~eAl~yar~~l 212 (382)
...-.-+...|+..+|+.+.++-+
T Consensus 83 ~~lg~~~~~~g~~~~A~~~~~~al 106 (164)
T 3sz7_A 83 SRLGLARFDMADYKGAKEAYEKGI 106 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHH
Confidence 333344556789999998888644
No 260
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=31.19 E-value=25 Score=26.63 Aligned_cols=48 Identities=21% Similarity=0.420 Sum_probs=30.5
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHhc-------------CCCccccCCCCC
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKN-------------HSRTFKCPYCPS 370 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~-------------~~~~~kCP~c~~ 370 (382)
-=.|+||..-..++=-| .--||.||-..||+++-.- ...--.||||..
T Consensus 15 D~~C~VC~~~t~~~l~p-CRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 15 DEMCDVCEVWTAESLFP-CRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp SCCCTTTCCCCSSCCSS-CSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CcccCccccccccceec-cccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 34688887544432212 2358999999999997211 112478999954
No 261
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.15 E-value=14 Score=22.63 Aligned_cols=16 Identities=13% Similarity=0.436 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2eoj_A 11 NPYECCECGKVFSRKD 26 (44)
T ss_dssp CSCEETTTTEECSSHH
T ss_pred cCeeCCCCCCccCCHH
Confidence 3689999999887643
No 262
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=31.13 E-value=37 Score=25.62 Aligned_cols=28 Identities=21% Similarity=0.208 Sum_probs=20.7
Q ss_pred HHHHHHH--cCChHHHHHHHHhcchHhhhc
Q 016792 152 QILEAMK--SGNLEPALKWAAANSDKLTQN 179 (382)
Q Consensus 152 ~I~~~L~--~gdl~~Al~W~~~n~~~L~~~ 179 (382)
+.+.+|+ ++|++.|++|+-+|...+.+.
T Consensus 37 ~a~~AL~~~n~n~e~A~ewL~~h~~D~D~~ 66 (85)
T 2dkl_A 37 PAEEALKSNNMNLDQAMSALLEKKVDVDKR 66 (85)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHTTSCCSSCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHCcCCcccc
Confidence 3455555 589999999999987665543
No 263
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=31.10 E-value=22 Score=21.98 Aligned_cols=16 Identities=31% Similarity=0.625 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2em0_A 11 KTWKCRECDMCFSQAS 26 (46)
T ss_dssp CCCCCSSSCCCCSSHH
T ss_pred cCeECCCCCcccCCHH
Confidence 3689999999987654
No 264
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.04 E-value=16 Score=22.61 Aligned_cols=16 Identities=19% Similarity=0.727 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytf_A 11 KPFECSECQKAFNTKS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCcCCCCCCcccCCHH
Confidence 4699999999887543
No 265
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=31.03 E-value=4.8 Score=28.03 Aligned_cols=10 Identities=30% Similarity=0.906 Sum_probs=8.1
Q ss_pred ccccCCCCCc
Q 016792 362 TFKCPYCPSD 371 (382)
Q Consensus 362 ~~kCP~c~~~ 371 (382)
..+||.|+..
T Consensus 36 dw~CP~Cga~ 45 (55)
T 2v3b_B 36 DWVCPDCGVG 45 (55)
T ss_dssp TCCCTTTCCC
T ss_pred CCcCCCCCCC
Confidence 4799999874
No 266
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.00 E-value=14 Score=22.97 Aligned_cols=16 Identities=19% Similarity=0.551 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~F~~~~ 26 (46)
T 2emi_A 11 RHYECSECGKAFIQKS 26 (46)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCCCCCCCCcccCCHH
Confidence 3699999999887543
No 267
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=30.84 E-value=1.6e+02 Score=21.69 Aligned_cols=93 Identities=6% Similarity=-0.017 Sum_probs=55.5
Q ss_pred HHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHH
Q 016792 112 QIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQ 191 (382)
Q Consensus 112 rlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~ 191 (382)
...+..+++.|.++.|.....++-... +.....+..+. .-.+..|+++.|+++++.- +.-.... ...+...
T Consensus 8 ~~~g~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~a--~~~~~~~~~~~A~~~~~~a---l~~~p~~--~~~~~~l 78 (126)
T 3upv_A 8 RLEGKEYFTKSDWPNAVKAYTEMIKRA--PEDARGYSNRA--AALAKLMSFPEAIADCNKA---IEKDPNF--VRAYIRK 78 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHH--HHHHHTTCHHHHHHHHHHH---HHHCTTC--HHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhC--CCChHHHHHHH--HHHHHhcCHHHHHHHHHHH---HHhCCCc--HHHHHHH
Confidence 456778889999988887776542111 22223333332 2234579999999999764 2221122 2233333
Q ss_pred HHHHHHcCCHHHHHHHHHHhcC
Q 016792 192 FVEILRKGSREEALKYARANLA 213 (382)
Q Consensus 192 fIeLl~~~~~~eAl~yar~~l~ 213 (382)
-.-+...|+..+|+.+.++-+.
T Consensus 79 g~~~~~~~~~~~A~~~~~~al~ 100 (126)
T 3upv_A 79 ATAQIAVKEYASALETLDAART 100 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHH
Confidence 4445567899999998886543
No 268
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.73 E-value=23 Score=21.94 Aligned_cols=16 Identities=19% Similarity=0.559 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2ytn_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp SSCBCTTTCCBCSSHH
T ss_pred cCeECCCCCCeeCCHH
Confidence 4689999999987654
No 269
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.68 E-value=15 Score=22.76 Aligned_cols=16 Identities=13% Similarity=0.420 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (44)
T 2epv_A 11 KPYECNECGKAFIWKS 26 (44)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCeECCCCCcccCchH
Confidence 3689999999887543
No 270
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.42 E-value=17 Score=22.52 Aligned_cols=16 Identities=25% Similarity=0.654 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eow_A 11 KPYKCNECGKAFRARS 26 (46)
T ss_dssp CCEECTTSCCEESSHH
T ss_pred CCeeccccCChhcCHH
Confidence 4689999999887543
No 271
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.37 E-value=21 Score=21.93 Aligned_cols=16 Identities=19% Similarity=0.349 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (44)
T 2eou_A 11 TTSECQECGKIFRHSS 26 (44)
T ss_dssp CCCCCTTTCCCCSSHH
T ss_pred cCeECCCCCcccCCHH
Confidence 3689999999987543
No 272
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=30.37 E-value=26 Score=28.08 Aligned_cols=38 Identities=21% Similarity=0.460 Sum_probs=29.1
Q ss_pred ccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHH
Q 016792 318 QFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKM 355 (382)
Q Consensus 318 ~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l 355 (382)
.|| .-|.|..|+..+.+....+....|.+||+.+-.++
T Consensus 83 ~wH~~CF~C~~C~~~L~~~g~~f~~~dg~~yC~~cy~~~ 121 (123)
T 2l4z_A 83 YWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRL 121 (123)
T ss_dssp EEETTTSBCTTTCCBGGGTTCCCBCSSSCCBCHHHHHHH
T ss_pred EEcccccCcCcCCCcccccCCceEEECCEEeCHHHhhhh
Confidence 566 57999999998874333567889999999887654
No 273
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.34 E-value=34 Score=23.35 Aligned_cols=16 Identities=44% Similarity=0.987 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 36 ~~~~C~~C~~~f~~~~ 51 (70)
T 1x5w_A 36 RPFKCNYCSFDTKQPS 51 (70)
T ss_dssp CSEECSSSSCEESSHH
T ss_pred CCEeCCCCCCccCCHH
Confidence 4699999999887543
No 274
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=30.33 E-value=16 Score=22.01 Aligned_cols=16 Identities=13% Similarity=0.434 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 10 ~~~~C~~C~k~f~~~~ 25 (42)
T 2epc_A 10 TPYLCGQCGKSFTQRG 25 (42)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCeECCCCCcccCCHH
Confidence 4699999999887543
No 275
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.29 E-value=17 Score=22.58 Aligned_cols=16 Identities=19% Similarity=0.559 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2en3_A 11 KPFQCKECGMNFSWSC 26 (46)
T ss_dssp CSEECSSSCCEESSSH
T ss_pred CCeeCcccChhhCCHH
Confidence 3689999999887543
No 276
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=30.25 E-value=1.5e+02 Score=21.20 Aligned_cols=94 Identities=16% Similarity=0.045 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchH
Q 016792 110 VSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHS 189 (382)
Q Consensus 110 lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~ 189 (382)
.-..++..+++.|.++.|..+.++.-... +.....+..+.. -....|+.+.|++++...-. ....+ ...+.
T Consensus 14 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~a~--~~~~~~~~~~A~~~~~~~~~---~~~~~--~~~~~ 84 (131)
T 2vyi_A 14 RLKTEGNEQMKVENFEAAVHFYGKAIELN--PANAVYFCNRAA--AYSKLGNYAGAVQDCERAIC---IDPAY--SKAYG 84 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHH---HCTTC--HHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHcC--CCCHHHHHHHHH--HHHHhhchHHHHHHHHHHHh---cCccC--HHHHH
Confidence 44567788888999888887776642211 112222322222 23457999999999876432 11111 12222
Q ss_pred HHHHHHHHcCCHHHHHHHHHHhc
Q 016792 190 LQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 190 q~fIeLl~~~~~~eAl~yar~~l 212 (382)
.--.-+.+.|+..+|+.+.++-+
T Consensus 85 ~~~~~~~~~~~~~~A~~~~~~~~ 107 (131)
T 2vyi_A 85 RMGLALSSLNKHVEAVAYYKKAL 107 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHH
Confidence 22233456788999998887643
No 277
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.17 E-value=35 Score=25.64 Aligned_cols=17 Identities=18% Similarity=0.557 Sum_probs=13.3
Q ss_pred CCccccCCCCCcCCccc
Q 016792 360 SRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 360 ~~~~kCP~c~~~~~~~~ 376 (382)
...++|+.|++.|....
T Consensus 60 ~k~~~C~~Cgk~F~~~~ 76 (96)
T 2ctd_A 60 QEMFTCHHCGKQLRSLA 76 (96)
T ss_dssp CCCCCCSSSCCCCSSHH
T ss_pred CCCeECCCCCCeeCCHH
Confidence 34799999999987543
No 278
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=30.15 E-value=1.4e+02 Score=22.05 Aligned_cols=56 Identities=11% Similarity=0.135 Sum_probs=32.0
Q ss_pred HHHcCChHHHHHHHHhcchHhhhcCC--chhhhchHHHHHHHHHcCCHHHHHHHHHHh
Q 016792 156 AMKSGNLEPALKWAAANSDKLTQNGS--DLQLKLHSLQFVEILRKGSREEALKYARAN 211 (382)
Q Consensus 156 ~L~~gdl~~Al~W~~~n~~~L~~~~s--~LeF~L~~q~fIeLl~~~~~~eAl~yar~~ 211 (382)
....|+...|+.|.+.--........ .-.-.++.+--.-+.+.|+..+|+.+.++-
T Consensus 15 ~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~a 72 (104)
T 2v5f_A 15 AYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKL 72 (104)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 34678888888888875433332110 011122222233345778888998888764
No 279
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=30.06 E-value=2.1e+02 Score=22.73 Aligned_cols=104 Identities=11% Similarity=0.034 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHhCC-----CcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCC
Q 016792 107 THTVSQIIASHFYRQGLFEVGDCFISETKE-----SECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGS 181 (382)
Q Consensus 107 ~~~lnrlI~~hLlR~G~~e~a~~f~~Es~~-----~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s 181 (382)
...+...++....+.|.++.|....+++-. .. +......+..+. .-....|+++.|++++.+--....+.+.
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~l~--~~~~~~g~~~~A~~~~~~al~~~~~~~~ 101 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD-HTAEHRALHQVG--MVERMAGNWDAARRCFLEERELLASLPE 101 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHH--HHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC-cHHHHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHHHHHcCc
Confidence 345566788888899999888777665421 11 122222222221 2233579999999999887655554442
Q ss_pred c--hhhhchHHHHHHHHHcCCHHHHHHHHHHhcC
Q 016792 182 D--LQLKLHSLQFVEILRKGSREEALKYARANLA 213 (382)
Q Consensus 182 ~--LeF~L~~q~fIeLl~~~~~~eAl~yar~~l~ 213 (382)
+ .....+..--.-....|+..+|+.|.++-+.
T Consensus 102 ~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (203)
T 3gw4_A 102 DPLAASANAYEVATVALHFGDLAGARQEYEKSLV 135 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 2 2222222223334457899999999887553
No 280
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.05 E-value=17 Score=22.48 Aligned_cols=16 Identities=13% Similarity=0.571 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2yrj_A 11 KPYRCGECGKAFAQKA 26 (46)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCeECCCCCCccCCHH
Confidence 3689999999887543
No 281
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.04 E-value=17 Score=22.59 Aligned_cols=16 Identities=19% Similarity=0.615 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2ytp_A 11 RHYECSECGKAFARKS 26 (46)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCeECCcCCcccCCHH
Confidence 4689999999887543
No 282
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.03 E-value=24 Score=21.77 Aligned_cols=16 Identities=19% Similarity=0.513 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2epz_A 11 KPFDCIDCGKAFSDHI 26 (46)
T ss_dssp CSBCCTTTCCCBSSHH
T ss_pred CCeECCCCCceeCCHH
Confidence 4699999999987643
No 283
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.96 E-value=17 Score=22.27 Aligned_cols=16 Identities=13% Similarity=0.706 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2emb_A 11 KRYECSKCQATFNLRK 26 (44)
T ss_dssp SSEECTTTCCEESCHH
T ss_pred CCeECCCCCCccCCHH
Confidence 3689999999887543
No 284
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=29.89 E-value=2.1e+02 Score=22.86 Aligned_cols=11 Identities=45% Similarity=0.890 Sum_probs=6.2
Q ss_pred HHHHHHcCChH
Q 016792 153 ILEAMKSGNLE 163 (382)
Q Consensus 153 I~~~L~~gdl~ 163 (382)
.+++++.||++
T Consensus 103 ~Iq~~~~~~~~ 113 (119)
T 2avr_X 103 KIQALRAGNLE 113 (119)
T ss_dssp HHHHHHHTTC-
T ss_pred HHHHHHccccc
Confidence 34666667664
No 285
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=29.89 E-value=24 Score=29.70 Aligned_cols=43 Identities=21% Similarity=0.488 Sum_probs=33.7
Q ss_pred cccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcC
Q 016792 317 FQFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNH 359 (382)
Q Consensus 317 ~~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~ 359 (382)
..|| .-|.|-.|+..+...+..+....|.+||+.+..++.+..
T Consensus 87 ~~~H~~CF~C~~C~~~L~~g~~f~~~~~g~~~C~~c~~~~~~~~ 130 (169)
T 2rgt_A 87 FVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAKQGG 130 (169)
T ss_dssp EEEEGGGCBCTTTCCBCCTTCEEEECTTSCEEEHHHHHHHHHCC
T ss_pred ceEeeCCCcCCCCCCCCCCCCceEEccCCeEECHHHHHHHhhcc
Confidence 3566 679999999998755544567899999999999886653
No 286
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=29.80 E-value=28 Score=23.95 Aligned_cols=17 Identities=18% Similarity=0.759 Sum_probs=12.8
Q ss_pred CCccccCC--CCCcCCccc
Q 016792 360 SRTFKCPY--CPSDIDAAQ 376 (382)
Q Consensus 360 ~~~~kCP~--c~~~~~~~~ 376 (382)
...++|++ |++.|....
T Consensus 45 ~~~~~C~~~~C~k~f~~~~ 63 (72)
T 2epa_A 45 EKPFSCSWKGCERRFARSD 63 (72)
T ss_dssp SCSEECCCTTCCCEESSHH
T ss_pred CCCccCCCCCCCcccCCHH
Confidence 34699976 999887644
No 287
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=29.77 E-value=43 Score=20.45 Aligned_cols=10 Identities=20% Similarity=-0.061 Sum_probs=7.8
Q ss_pred CCccccCCCC
Q 016792 360 SRTFKCPYCP 369 (382)
Q Consensus 360 ~~~~kCP~c~ 369 (382)
...+.||+|+
T Consensus 36 ~~~~~C~~cg 45 (45)
T 2epq_A 36 SVGKSGPSSG 45 (45)
T ss_dssp CCCCCCCCCC
T ss_pred CCCCCCcCCC
Confidence 3469999995
No 288
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.73 E-value=24 Score=21.77 Aligned_cols=16 Identities=19% Similarity=0.642 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytr_A 11 KPYKCNECGKAFSQTS 26 (46)
T ss_dssp CTTCCTTTCCCCSSHH
T ss_pred cCcCCCCCCCccCCHH
Confidence 4689999999987643
No 289
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.71 E-value=15 Score=22.72 Aligned_cols=16 Identities=13% Similarity=0.438 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2yts_A 11 KPYICNECGKSFIQKS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCEECCCCChhhCChH
Confidence 3689999999887543
No 290
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.68 E-value=24 Score=21.88 Aligned_cols=16 Identities=19% Similarity=0.586 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2elz_A 11 KPYKCEDCGKGYNRRL 26 (46)
T ss_dssp SSCBCSSSCCBCSSHH
T ss_pred CCeeCcccCchhCCHH
Confidence 4699999999987643
No 291
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=29.68 E-value=21 Score=22.13 Aligned_cols=16 Identities=13% Similarity=0.603 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2emk_A 11 KPYECKECGKAFSQTT 26 (46)
T ss_dssp CSCBCSSSCCBCSCHH
T ss_pred CceECCCCCchhCCHH
Confidence 3689999999987654
No 292
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=29.51 E-value=45 Score=20.64 Aligned_cols=17 Identities=24% Similarity=0.466 Sum_probs=13.0
Q ss_pred HHHHHH--cCChHHHHHHH
Q 016792 153 ILEAMK--SGNLEPALKWA 169 (382)
Q Consensus 153 I~~~L~--~gdl~~Al~W~ 169 (382)
.+.+|+ +||++.|++|+
T Consensus 21 a~~AL~~~~~n~e~A~~~L 39 (40)
T 1z96_A 21 AAQALDAANGDLDVAASFL 39 (40)
T ss_dssp HHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHH
Confidence 345555 68999999996
No 293
>2xz2_A CSTF-50, isoform B; RNA-binding protein, 3' END mRNA maturation, transcription; 1.40A {Drosophila melanogaster}
Probab=29.41 E-value=61 Score=23.28 Aligned_cols=33 Identities=12% Similarity=0.163 Sum_probs=29.4
Q ss_pred CHHHHHHHHHHHHHHhCcHHHHHHHHHHhCCCc
Q 016792 106 DTHTVSQIIASHFYRQGLFEVGDCFISETKESE 138 (382)
Q Consensus 106 ~~~~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~ 138 (382)
+++.+-|+|+.-|.--||-.+|..+.+..+...
T Consensus 15 ~Re~LYrLIISQL~YDG~~~iA~~L~~~v~~~~ 47 (66)
T 2xz2_A 15 NREILYRLMISQLMYDGLEKFAMELSMLVKADQ 47 (66)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCCC
Confidence 478899999999999999999999999988653
No 294
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.38 E-value=22 Score=21.79 Aligned_cols=16 Identities=19% Similarity=0.482 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 9 k~~~C~~C~k~f~~~~ 24 (43)
T 2yrm_A 9 GAFFCNECDCRFSEEA 24 (43)
T ss_dssp CCBCCSSSCCCBSSHH
T ss_pred CCEECCCCCCeeCChH
Confidence 4699999999987543
No 295
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.36 E-value=25 Score=21.78 Aligned_cols=16 Identities=13% Similarity=0.586 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytq_A 11 KPYGCSECGKAFSSKS 26 (46)
T ss_dssp CSCBCSSSCCBCSCHH
T ss_pred CCcCCCccChhhCChH
Confidence 4689999999987643
No 296
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=29.33 E-value=18 Score=22.46 Aligned_cols=16 Identities=19% Similarity=0.679 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2emj_A 11 KPFECAECGKSFSISS 26 (46)
T ss_dssp CSEECSSSSCEESSHH
T ss_pred CCEECCCCCcccCCHH
Confidence 4689999999887543
No 297
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.19 E-value=24 Score=21.71 Aligned_cols=16 Identities=19% Similarity=0.607 Sum_probs=12.7
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eq4_A 11 KLYNCKECGKSFSRAP 26 (46)
T ss_dssp CCCCBTTTTBCCSCHH
T ss_pred CCeECCCCCCccCchH
Confidence 3689999999987643
No 298
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=29.05 E-value=2.2e+02 Score=26.21 Aligned_cols=101 Identities=11% Similarity=0.083 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhC-CCcchhhhHHHHHH-------HHHHHHHHHcCChHHHHHHHHhcchHhhhcCCc
Q 016792 111 SQIIASHFYRQGLFEVGDCFISETK-ESECSAAILSIFED-------MYQILEAMKSGNLEPALKWAAANSDKLTQNGSD 182 (382)
Q Consensus 111 nrlI~~hLlR~G~~e~a~~f~~Es~-~~~~~~~~~~~f~~-------~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~ 182 (382)
-..++..+.+.|.++.|....++.- +..........+.. +....-....|+++.|+++++..-. +...+..
T Consensus 214 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~-~~p~~~~ 292 (450)
T 2y4t_A 214 FYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMK-TEPSIAE 292 (450)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCCSSHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-cCCcchH
Confidence 3445666777787777776665541 11100111111111 1112333456888888888876421 1111111
Q ss_pred hhhhchHHHHHHHHHcCCHHHHHHHHHHhc
Q 016792 183 LQLKLHSLQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 183 LeF~L~~q~fIeLl~~~~~~eAl~yar~~l 212 (382)
....++..--.-+.+.|+..+|+.+.++-+
T Consensus 293 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 322 (450)
T 2y4t_A 293 YTVRSKERICHCFSKDEKPVEAIRVCSEVL 322 (450)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 223333333444556788888888888644
No 299
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.05 E-value=17 Score=22.55 Aligned_cols=16 Identities=13% Similarity=0.602 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eq3_A 11 KPYECNQCGKAFSVRS 26 (46)
T ss_dssp CSSEETTTTEECSSHH
T ss_pred CCeECCCCChhhCCHH
Confidence 3689999999887643
No 300
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.89 E-value=24 Score=21.89 Aligned_cols=16 Identities=19% Similarity=0.582 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytm_A 11 KPYKCMECGKAFGDNS 26 (46)
T ss_dssp CSSSBTTTTBCCSSHH
T ss_pred CCcCCCCCCchhCCHH
Confidence 4689999999987654
No 301
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.88 E-value=19 Score=22.32 Aligned_cols=16 Identities=19% Similarity=0.372 Sum_probs=12.3
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2epw_A 11 KPCKCTECGKAFCWKS 26 (46)
T ss_dssp CSEECSSSCCEESSSH
T ss_pred CCeeCCCCCCccCCHH
Confidence 3689999998887653
No 302
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.79 E-value=16 Score=22.76 Aligned_cols=16 Identities=19% Similarity=0.603 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2em4_A 11 RPYECIECGKAFKTKS 26 (46)
T ss_dssp SSEECSSSCCEESSHH
T ss_pred cCcCCCCCCCccCCHH
Confidence 3689999999887543
No 303
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=28.59 E-value=2.8e+02 Score=26.71 Aligned_cols=21 Identities=14% Similarity=0.045 Sum_probs=11.3
Q ss_pred HHHHHHHHhCcHHHHHHHHHH
Q 016792 113 IIASHFYRQGLFEVGDCFISE 133 (382)
Q Consensus 113 lI~~hLlR~G~~e~a~~f~~E 133 (382)
.++.-+.+.|.++.|..+.++
T Consensus 412 ~l~~~~~~~g~~~~A~~~~~~ 432 (597)
T 2xpi_A 412 GFAHSFAIEGEHDQAISAYTT 432 (597)
T ss_dssp HHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHH
Confidence 445555556666555555443
No 304
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.45 E-value=26 Score=21.69 Aligned_cols=16 Identities=13% Similarity=0.636 Sum_probs=12.8
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytt_A 11 KPYQCSECGKSFSGSY 26 (46)
T ss_dssp CTTCCSSSCCCCSSHH
T ss_pred CCeeCCCCCcccCCHH
Confidence 4699999999987643
No 305
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.33 E-value=19 Score=22.28 Aligned_cols=16 Identities=13% Similarity=0.619 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ep3_A 11 KPYRCAECGKAFTDRS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeECCCCCchhCCHH
Confidence 3689999999887543
No 306
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.29 E-value=19 Score=22.34 Aligned_cols=16 Identities=25% Similarity=0.609 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2em2_A 11 KPFKCKECGKAFRQNI 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCEECCcCCchhCCHH
Confidence 4689999999887543
No 307
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=28.22 E-value=19 Score=25.03 Aligned_cols=37 Identities=22% Similarity=0.516 Sum_probs=28.7
Q ss_pred cccc---cceeccccccccCCCCCCeeccCchhhh-HHHHHHH
Q 016792 317 FQFH---SIFVCPVSKEQTSDDNPPMIMSCGHVLC-RQSINKM 355 (382)
Q Consensus 317 ~~~h---S~~~Cpi~~~~~~~~Npp~~l~cGhv~~-~~~l~~l 355 (382)
..|| .-|.|-.|+..++. .++....|.+|| +++-.+|
T Consensus 24 ~~wH~~~~CF~C~~C~~~L~~--~~f~~~~g~~yC~~~C~~k~ 64 (65)
T 2iyb_E 24 FSWHASTECFLCSCCSKCLIG--QKFMPVEGMVFCSVECKKRM 64 (65)
T ss_dssp EEEETTTTTSBCTTTCCBCTT--SCCEEETTEEESSHHHHHTT
T ss_pred CccCCCCCCEECCCCCCcCCC--CceEEECCEEecCHHHhhhh
Confidence 4677 77999999998864 357778899999 7776654
No 308
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.21 E-value=20 Score=22.21 Aligned_cols=16 Identities=19% Similarity=0.735 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eme_A 11 KPYVCDYCGKAFGLSA 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeECCCCChhhCCHH
Confidence 4689999999887543
No 309
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=28.14 E-value=2.4e+02 Score=22.81 Aligned_cols=95 Identities=13% Similarity=-0.031 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhC-CCcchh---------hh----HHHHHHHHHHHHHHHcCChHHHHHHHHhcchHh
Q 016792 111 SQIIASHFYRQGLFEVGDCFISETK-ESECSA---------AI----LSIFEDMYQILEAMKSGNLEPALKWAAANSDKL 176 (382)
Q Consensus 111 nrlI~~hLlR~G~~e~a~~f~~Es~-~~~~~~---------~~----~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L 176 (382)
-..++..+++.|.++.|....+++- +..... .. ...+..+ -.-.+..|+++.|+.+++.--
T Consensus 41 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--a~~~~~~~~~~~A~~~~~~al--- 115 (198)
T 2fbn_A 41 IKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNL--ATCYNKNKDYPKAIDHASKVL--- 115 (198)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHH--HHHHHHTTCHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHH--HHHHHHhcCHHHHHHHHHHHH---
Confidence 3457888899999988887776542 111000 00 0112111 122345799999999998642
Q ss_pred hhcCCchhhhchHHHHHHHHHcCCHHHHHHHHHHhc
Q 016792 177 TQNGSDLQLKLHSLQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 177 ~~~~s~LeF~L~~q~fIeLl~~~~~~eAl~yar~~l 212 (382)
....... ..+...-.-+...|+..+|+.+.++-+
T Consensus 116 ~~~p~~~--~~~~~lg~~~~~~~~~~~A~~~~~~al 149 (198)
T 2fbn_A 116 KIDKNNV--KALYKLGVANMYFGFLEEAKENLYKAA 149 (198)
T ss_dssp HHSTTCH--HHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HhCcccH--HHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 2111121 222223333456789999999988754
No 310
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.12 E-value=17 Score=22.62 Aligned_cols=16 Identities=19% Similarity=0.627 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2yto_A 11 KPYKCSDCGKAFTRKS 26 (46)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCEECcccCCccCCHh
Confidence 3689999999887543
No 311
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.95 E-value=17 Score=22.61 Aligned_cols=16 Identities=25% Similarity=0.762 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eoy_A 11 KCFKCNKCEKTFSCSK 26 (46)
T ss_dssp CCEECSSSCCEESSSH
T ss_pred CCEECcCCCCcCCCHH
Confidence 3689999999887654
No 312
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=27.87 E-value=16 Score=22.65 Aligned_cols=16 Identities=19% Similarity=0.455 Sum_probs=13.1
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 7 kp~~C~~CgK~F~~~s 22 (36)
T 1fv5_A 7 ARFMCLPCGIAFSSPS 22 (36)
T ss_dssp CCCEETTTTEECSCHH
T ss_pred cCeECCCCCCccCCHh
Confidence 4699999999987654
No 313
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=27.69 E-value=4.9e+02 Score=26.93 Aligned_cols=91 Identities=8% Similarity=-0.079 Sum_probs=46.6
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHHH
Q 016792 113 IIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQF 192 (382)
Q Consensus 113 lI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~f 192 (382)
-++.-+.+.|.++.|....+++=. . ++...+.+..+..+. ...|+++.|+++.++- |.-.....+. +..--
T Consensus 82 nLg~~l~~~g~~~~A~~~~~kAl~-l-~P~~~~a~~~Lg~~~--~~~g~~~eAi~~~~~A---l~l~P~~~~a--~~~L~ 152 (723)
T 4gyw_A 82 NMGNTLKEMQDVQGALQCYTRAIQ-I-NPAFADAHSNLASIH--KDSGNIPEAIASYRTA---LKLKPDFPDA--YCNLA 152 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH-H-CTTCHHHHHHHHHHH--HHTTCHHHHHHHHHHH---HHHCSCCHHH--HHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHH-h-CCCCHHHHHHHHHHH--HHcCCHHHHHHHHHHH---HHhCCCChHH--Hhhhh
Confidence 456677778877777666554411 1 123333444443332 2358888888887653 2222222221 11112
Q ss_pred HHHHHcCCHHHHHHHHHHhc
Q 016792 193 VEILRKGSREEALKYARANL 212 (382)
Q Consensus 193 IeLl~~~~~~eAl~yar~~l 212 (382)
.-+...|+..+|+++.++-+
T Consensus 153 ~~l~~~g~~~~A~~~~~kal 172 (723)
T 4gyw_A 153 HCLQIVCDWTDYDERMKKLV 172 (723)
T ss_dssp HHHHHTTCCTTHHHHHHHHH
T ss_pred hHHHhcccHHHHHHHHHHHH
Confidence 22334577777777766543
No 314
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=27.67 E-value=20 Score=22.11 Aligned_cols=16 Identities=13% Similarity=0.605 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2el4_A 11 KPYGCSQCAKTFSLKS 26 (46)
T ss_dssp CSEECSSSSCEESSHH
T ss_pred CceECCCCCchhCCHH
Confidence 4689999999887644
No 315
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.56 E-value=20 Score=22.21 Aligned_cols=16 Identities=25% Similarity=0.623 Sum_probs=12.3
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2ytg_A 11 KPFKCGECGKSYNQRV 26 (46)
T ss_dssp CSEECTTTCCEESSSH
T ss_pred CCeECCCCCcccCCHH
Confidence 3689999998887654
No 316
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.52 E-value=21 Score=22.08 Aligned_cols=16 Identities=13% Similarity=0.480 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2eor_A 11 KPYNCEECGKAFIHDS 26 (46)
T ss_dssp CSEECTTTCCEESSHH
T ss_pred cCccCCCCCCCcCCHH
Confidence 4689999999887543
No 317
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=27.41 E-value=2.1e+02 Score=21.92 Aligned_cols=23 Identities=4% Similarity=0.088 Sum_probs=12.8
Q ss_pred HHHHHHHHHhCcHHHHHHHHHHh
Q 016792 112 QIIASHFYRQGLFEVGDCFISET 134 (382)
Q Consensus 112 rlI~~hLlR~G~~e~a~~f~~Es 134 (382)
..++..+.+.|.++.|....++.
T Consensus 12 ~~~~~~~~~~~~~~~A~~~~~~~ 34 (186)
T 3as5_A 12 RDKGISHAKAGRYSQAVMLLEQV 34 (186)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTTT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHH
Confidence 34455555666666665555544
No 318
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=27.35 E-value=1.8e+02 Score=21.16 Aligned_cols=33 Identities=9% Similarity=0.300 Sum_probs=16.9
Q ss_pred HHHHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhh
Q 016792 8 DAFDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKS 44 (382)
Q Consensus 8 ~~~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~ 44 (382)
+++..++++... ..+.|+..++.|....+.|..
T Consensus 12 ~~l~~~A~~~~~----~~~~i~~~l~~L~~~v~~L~~ 44 (99)
T 3zbh_A 12 EELRGVARQYNV----ESSNVTELIARLDQMSHTLQG 44 (99)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHh
Confidence 345555555555 444555555555555555543
No 319
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=27.31 E-value=3.3e+02 Score=24.22 Aligned_cols=20 Identities=15% Similarity=0.099 Sum_probs=9.6
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 016792 24 TQEVIDLIVQEIEKALETVK 43 (382)
Q Consensus 24 ~~~~id~~~~~l~~~~~~~~ 43 (382)
.++.++.+...|+.+..++.
T Consensus 88 ~~kE~~aL~kEie~~~~~i~ 107 (256)
T 3na7_A 88 SERELRSLNIEEDIAKERSN 107 (256)
T ss_dssp SSSHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 44444445455555544443
No 320
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.11 E-value=18 Score=22.41 Aligned_cols=16 Identities=13% Similarity=0.642 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~F~~~~ 26 (46)
T 2em3_A 11 KPYECKVCSKAFTQKA 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCeECCCCCcccCCHH
Confidence 3689999999887543
No 321
>3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp}
Probab=27.10 E-value=2.7e+02 Score=23.12 Aligned_cols=40 Identities=13% Similarity=0.162 Sum_probs=26.6
Q ss_pred HHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhhcCCCCh
Q 016792 11 DRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKSASHLDD 50 (382)
Q Consensus 11 ~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~~~~~~~ 50 (382)
.++.+++--+...+++.+|.+...|+.+..+|...+|.+|
T Consensus 61 td~ye~ai~n~~sA~~~~d~lekKl~~aq~kL~~L~P~~P 100 (158)
T 3tul_A 61 TDLYEASIKKTDTAKSVYDAATKKLTQAQNKLQSLDPADP 100 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence 3444444444455889999999999999999998877776
No 322
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.09 E-value=21 Score=22.07 Aligned_cols=16 Identities=19% Similarity=0.590 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2emh_A 11 RPYICTVCGKAFTDRS 26 (46)
T ss_dssp CSEECTTTCCEESSHH
T ss_pred CCcCCCCCCchhCCHH
Confidence 4699999999887643
No 323
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=27.04 E-value=18 Score=31.17 Aligned_cols=54 Identities=24% Similarity=0.458 Sum_probs=40.2
Q ss_pred ccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 318 QFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 318 ~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
.|| .-|.|..|+..+.....++....|.+||+.+-.++... .-+|+.|.+.+..
T Consensus 27 ~wH~~CF~C~~C~~~L~~~g~~~~~~~g~~yC~~cy~~~~~~---~~~C~~C~~~I~~ 81 (188)
T 1rut_X 27 YWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGN---SGACSACGQSIPA 81 (188)
T ss_dssp EECGGGCBCTTTCCBHHHHCSEEEEETTEEECHHHHHHHHSC---CEECTTTCCEECT
T ss_pred EecccCcccCCCCcccccCCceEEEeCCcccccccccccccc---CCccccCCCcccc
Confidence 466 57999999998865233677889999999999887532 1378888887654
No 324
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.02 E-value=20 Score=22.20 Aligned_cols=16 Identities=19% Similarity=0.540 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ene_A 11 KPYKCNECGKVFRHNS 26 (46)
T ss_dssp SSEECSSSCCEESSHH
T ss_pred CCeECCCCCchhCChH
Confidence 3689999999887543
No 325
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.97 E-value=20 Score=22.26 Aligned_cols=16 Identities=19% Similarity=0.613 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2emf_A 11 KHFECTECGKAFTRKS 26 (46)
T ss_dssp CCEECSSSCCEESCHH
T ss_pred CCeECCCCCchhCCHH
Confidence 3689999999887643
No 326
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=26.96 E-value=2.6e+02 Score=22.81 Aligned_cols=93 Identities=15% Similarity=0.055 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhch
Q 016792 109 TVSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLH 188 (382)
Q Consensus 109 ~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~ 188 (382)
.+...++..+.+.|.++.|....+++-... +.....+..+..+. +..|+.+.|+++++.--.. .+-....+
T Consensus 126 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~l~~~~--~~~~~~~~A~~~~~~~~~~-----~~~~~~~~ 196 (243)
T 2q7f_A 126 DLFYMLGTVLVKLEQPKLALPYLQRAVELN--ENDTEARFQFGMCL--ANEGMLDEALSQFAAVTEQ-----DPGHADAF 196 (243)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHH--HHHTCCHHHHHHHHHHHHH-----CTTCHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhC--CccHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHh-----CcccHHHH
Q ss_pred HHHHHHHHHcCCHHHHHHHHHH
Q 016792 189 SLQFVEILRKGSREEALKYARA 210 (382)
Q Consensus 189 ~q~fIeLl~~~~~~eAl~yar~ 210 (382)
..--.-..+.|+..+|+.+.++
T Consensus 197 ~~la~~~~~~~~~~~A~~~~~~ 218 (243)
T 2q7f_A 197 YNAGVTYAYKENREKALEMLDK 218 (243)
T ss_dssp HHHHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHH
No 327
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.95 E-value=21 Score=22.14 Aligned_cols=16 Identities=13% Similarity=0.509 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytj_A 11 KPYICAECGKAFTIRS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCeECCCCChhhCCHH
Confidence 4699999999887543
No 328
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=26.87 E-value=2.2e+02 Score=22.08 Aligned_cols=95 Identities=9% Similarity=0.008 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHh-CC---------Ccc------hhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcch
Q 016792 111 SQIIASHFYRQGLFEVGDCFISET-KE---------SEC------SAAILSIFEDMYQILEAMKSGNLEPALKWAAANSD 174 (382)
Q Consensus 111 nrlI~~hLlR~G~~e~a~~f~~Es-~~---------~~~------~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~ 174 (382)
-+-.+..+++.|.++.|.....++ .+ ... .+.....+. +.-.-.+..|+++.|+.++..-
T Consensus 14 ~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--nla~~~~~~~~~~~A~~~~~~a-- 89 (162)
T 3rkv_A 14 LRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYA--NMSQCYLNIGDLHEAEETSSEV-- 89 (162)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHH--HHHHHHHHHTCHHHHHHHHHHH--
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHH--HHHHHHHhcCcHHHHHHHHHHH--
Confidence 345678888888887776655443 11 000 011112222 2222344579999999999864
Q ss_pred HhhhcCCchhhhchHHHHHHHHHcCCHHHHHHHHHHhc
Q 016792 175 KLTQNGSDLQLKLHSLQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 175 ~L~~~~s~LeF~L~~q~fIeLl~~~~~~eAl~yar~~l 212 (382)
|.-.... ...+...-.-+...|+..+|+.+.++-+
T Consensus 90 -l~~~p~~--~~a~~~~g~~~~~~g~~~~A~~~~~~al 124 (162)
T 3rkv_A 90 -LKREETN--EKALFRRAKARIAAWKLDEAEEDLKLLL 124 (162)
T ss_dssp -HHHSTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -HhcCCcc--hHHHHHHHHHHHHHhcHHHHHHHHHHHH
Confidence 2222222 2233333444567799999999988754
No 329
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.82 E-value=21 Score=22.03 Aligned_cols=16 Identities=13% Similarity=0.407 Sum_probs=12.4
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2en8_A 11 KSHTCDECGKNFCYIS 26 (46)
T ss_dssp SSEECTTTCCEESSHH
T ss_pred CCeECCCcCcccCCHH
Confidence 3689999999887543
No 330
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=26.80 E-value=57 Score=28.22 Aligned_cols=52 Identities=27% Similarity=0.557 Sum_probs=29.5
Q ss_pred eeccccccccCCCC-CCeeccCc------hh----hhHHHHHHHHhc-CCCccccCCCCCcCCc
Q 016792 323 FVCPVSKEQTSDDN-PPMIMSCG------HV----LCRQSINKMSKN-HSRTFKCPYCPSDIDA 374 (382)
Q Consensus 323 ~~Cpi~~~~~~~~N-pp~~l~cG------hv----~~~~~l~~l~~~-~~~~~kCP~c~~~~~~ 374 (382)
..||||+...+++. .-.|+-|. |. ++.+-.+.+... .+..+.||.|......
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 46999999887754 23455553 22 223223333211 0125999999887654
No 331
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.76 E-value=22 Score=22.03 Aligned_cols=16 Identities=19% Similarity=0.540 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2eq0_A 11 KPYKCHECGKVFRRNS 26 (46)
T ss_dssp CCEECTTTCCEESSHH
T ss_pred CCeECCCCCchhCCHH
Confidence 4699999999887643
No 332
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.75 E-value=21 Score=22.11 Aligned_cols=16 Identities=19% Similarity=0.675 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eml_A 11 KPYECSVCGKAFSHRQ 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeeCCCcCCccCCHH
Confidence 4689999999887643
No 333
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.69 E-value=17 Score=22.37 Aligned_cols=16 Identities=13% Similarity=0.515 Sum_probs=12.3
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~F~~~~ 26 (44)
T 2eox_A 11 KSYNCNECGKAFTRIF 26 (44)
T ss_dssp CCEEETTTTEEESSSH
T ss_pred CCeECcccCcccCCHH
Confidence 3689999998887654
No 334
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.62 E-value=21 Score=22.11 Aligned_cols=16 Identities=19% Similarity=0.559 Sum_probs=12.2
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2yu8_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp SSEECSSSCCEESSSH
T ss_pred CCeECCcCCchhCCHH
Confidence 3689999998887654
No 335
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=26.58 E-value=2.2e+02 Score=21.82 Aligned_cols=94 Identities=12% Similarity=0.119 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchH
Q 016792 110 VSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHS 189 (382)
Q Consensus 110 lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~ 189 (382)
+...++..+.+.|.++.|....++.-... +.....+..+. .-....|+++.|++++++-- ...... ...+.
T Consensus 78 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~~~---~~~~~~--~~~~~ 148 (186)
T 3as5_A 78 VATVLGLTYVQVQKYDLAVPLLIKVAEAN--PINFNVRFRLG--VALDNLGRFDEAIDSFKIAL---GLRPNE--GKVHR 148 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHH--HHHHHTTCHHHHHHHHHHHH---HHCTTC--HHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcC--cHhHHHHHHHH--HHHHHcCcHHHHHHHHHHHH---hcCccc--hHHHH
Confidence 33456777788888888777666542111 11122222222 22345789999999887642 111111 12222
Q ss_pred HHHHHHHHcCCHHHHHHHHHHhc
Q 016792 190 LQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 190 q~fIeLl~~~~~~eAl~yar~~l 212 (382)
.--.-....|+..+|+.+.++-+
T Consensus 149 ~la~~~~~~~~~~~A~~~~~~~~ 171 (186)
T 3as5_A 149 AIAFSYEQMGRHEEALPHFKKAN 171 (186)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHH
Confidence 22223345688888888877543
No 336
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=26.55 E-value=12 Score=30.86 Aligned_cols=53 Identities=9% Similarity=0.142 Sum_probs=33.0
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCC--CCCcCCccc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPY--CPSDIDAAQ 376 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~--c~~~~~~~~ 376 (382)
...||+|+......++-..+.-..++....+.+...+- .++||+ |.....+.+
T Consensus 66 ~~~CP~Cr~~~~~~~~~~~l~~~~~~~d~~~~~~i~~L--~v~Cpn~GC~~~~~l~~ 120 (141)
T 3knv_A 66 PQNCAACVHEGIYEEGISILESSSAFPDNAARREVESL--PAVCPSDGCTWKGTLKE 120 (141)
T ss_dssp CEECHHHHHTTCCCTTTTEECGGGCEECHHHHHHHHTS--EEECCSTTCCCEEEHHH
T ss_pred CCCCCCCCCcccccccccccchhhhcccHHHHHHHccc--ccccCCCCCCCEeEHHH
Confidence 36899999865443322345555677667777665543 789985 666555443
No 337
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=26.54 E-value=22 Score=21.97 Aligned_cols=16 Identities=19% Similarity=0.565 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2em9_A 11 KPYNCKECGKSFRWAS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCeECCccccccCChH
Confidence 4689999999887543
No 338
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=26.53 E-value=21 Score=22.78 Aligned_cols=16 Identities=13% Similarity=0.542 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..|+|++|++.|....
T Consensus 6 kp~~C~~C~k~F~~~~ 21 (48)
T 3iuf_A 6 KPYACDICGKRYKNRP 21 (48)
T ss_dssp SCEECTTTCCEESSHH
T ss_pred cCEECCCcCcccCCHH
Confidence 3699999999887543
No 339
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.52 E-value=22 Score=22.02 Aligned_cols=16 Identities=13% Similarity=0.650 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ep2_A 11 KPYECSICGKSFTKKS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCcCCCCCCcccCCHH
Confidence 4689999999887543
No 340
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.47 E-value=22 Score=25.44 Aligned_cols=41 Identities=10% Similarity=0.181 Sum_probs=31.9
Q ss_pred cccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhc
Q 016792 317 FQFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKN 358 (382)
Q Consensus 317 ~~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~ 358 (382)
..|| .-|.|..|+..+.+.. .+....|.+||+.+-.++...
T Consensus 25 ~~wH~~CF~C~~C~~~L~~~~-~f~~~~~~~yC~~C~~~~~~~ 66 (73)
T 1wig_A 25 KHYHPSCALCVRCGQMFAEGE-EMYLQGSSIWHPACRQAARTE 66 (73)
T ss_dssp CCBCTTTSCCSSSCCCCCSSC-CCEEETTEEECTTHHHHTSSS
T ss_pred CCCCCCcCEeCCCCCCCCCCC-eeEeeCCEEEChHHChHhhcc
Confidence 3677 4699999999987433 567789999999999887543
No 341
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.45 E-value=21 Score=22.12 Aligned_cols=16 Identities=19% Similarity=0.559 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2ytk_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCEeCCcCCCccCCHH
Confidence 4689999999887543
No 342
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=26.42 E-value=23 Score=30.32 Aligned_cols=23 Identities=17% Similarity=0.236 Sum_probs=16.8
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhC
Q 016792 113 IIASHFYRQGLFEVGDCFISETK 135 (382)
Q Consensus 113 lI~~hLlR~G~~e~a~~f~~Es~ 135 (382)
+-+..--+.||.++|..|...+.
T Consensus 27 ~~A~~A~~eG~~~iA~~F~~~A~ 49 (170)
T 3pwf_A 27 IFAEKAEQEGFPNIAKLFRAIAY 49 (170)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCHHHHHHHHHHHHH
Confidence 34556667888888888877664
No 343
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.31 E-value=22 Score=22.10 Aligned_cols=16 Identities=13% Similarity=0.474 Sum_probs=12.4
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2em5_A 11 KSHQCHECGRGFTLKS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeECCcCCCccCCHH
Confidence 3689999999887543
No 344
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.29 E-value=22 Score=21.76 Aligned_cols=16 Identities=19% Similarity=0.694 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 9 k~~~C~~C~k~f~~~~ 24 (44)
T 2emx_A 9 KPFGCSCCEKAFSSKS 24 (44)
T ss_dssp CCEECSSSSCEESSHH
T ss_pred cCccCCCCCcccCCHH
Confidence 3689999999887644
No 345
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=26.27 E-value=1.7e+02 Score=20.48 Aligned_cols=94 Identities=13% Similarity=-0.028 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHH
Q 016792 111 SQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSL 190 (382)
Q Consensus 111 nrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q 190 (382)
-..++..+++.|.++.|..+.+++-... +.....+..+.. -.+..|+.+.|+.+++..- ....... ..+..
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~a~--~~~~~~~~~~A~~~~~~~~---~~~~~~~--~~~~~ 77 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKLD--PHNHVLYSNRSA--AYAKKGDYQKAYEDGCKTV---DLKPDWG--KGYSR 77 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHH--HHHHHTCHHHHHHHHHHHH---HHCTTCH--HHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHC--CCcHHHHHHHHH--HHHhhccHHHHHHHHHHHH---HhCcccH--HHHHH
Confidence 3456777888999988888776652211 122222322222 2345799999999987642 2111222 22222
Q ss_pred HHHHHHHcCCHHHHHHHHHHhcC
Q 016792 191 QFVEILRKGSREEALKYARANLA 213 (382)
Q Consensus 191 ~fIeLl~~~~~~eAl~yar~~l~ 213 (382)
.-.-+...|+..+|+.+.++-+.
T Consensus 78 ~a~~~~~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 78 KAAALEFLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhHHHHHHHHHHHHH
Confidence 23334567899999999887554
No 346
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.25 E-value=15 Score=22.90 Aligned_cols=16 Identities=13% Similarity=0.521 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eoz_A 11 KPYSCNVCGKAFVLSA 26 (46)
T ss_dssp CSEEETTTTEEESSHH
T ss_pred CCeECcccChhhCCHH
Confidence 3689999999887543
No 347
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=26.22 E-value=2.6e+02 Score=22.54 Aligned_cols=117 Identities=9% Similarity=0.020 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcC---------
Q 016792 110 VSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNG--------- 180 (382)
Q Consensus 110 lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~--------- 180 (382)
+...++.-+.+.|.++.|....+++-... +.....+..+..+ ....|+.+.|+++++.--.......
T Consensus 39 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~lg~~--~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 114 (213)
T 1hh8_A 39 ICFNIGCMYTILKNMTEAEKAFTRSINRD--KHLAVAYFQRGML--YYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 114 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC--ccchHHHHHHHHH--HHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcc
Confidence 45567788889999988887776652111 2222333333332 3457999999999876432111110
Q ss_pred --CchhhhchHHHHHHHHHcCCHHHHHHHHHHhcCCchhhhHHHHHHHHHhH
Q 016792 181 --SDLQLKLHSLQFVEILRKGSREEALKYARANLAPFASNHVNEIQKLMACL 230 (382)
Q Consensus 181 --s~LeF~L~~q~fIeLl~~~~~~eAl~yar~~l~~f~~~~~~eiq~lm~~L 230 (382)
..-....+...-.-+.+.|+..+|+.+.++-+.-........+...+..+
T Consensus 115 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~ 166 (213)
T 1hh8_A 115 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECV 166 (213)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGGGHHHHHHHHH
T ss_pred ccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccccchHHHHHHHH
Confidence 00111233333334556789999999998765543322233444444443
No 348
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.20 E-value=18 Score=26.05 Aligned_cols=36 Identities=17% Similarity=0.307 Sum_probs=21.8
Q ss_pred CchhhhHHHHHHHHhc-CCCccccCCCCCcCCccccc
Q 016792 343 CGHVLCRQSINKMSKN-HSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 343 cGhv~~~~~l~~l~~~-~~~~~kCP~c~~~~~~~~~~ 378 (382)
||-.+....|+.=... +...+.||+|++.+...+..
T Consensus 23 C~~~~~~~~L~~H~~~c~~~~~~C~~C~~~~~~~~l~ 59 (75)
T 2d9k_A 23 CDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLK 59 (75)
T ss_dssp SCCEECHHHHHHHHHHHHHCEEECSSSCCEEETTGGG
T ss_pred cChHhhHHHHHHHHhHcCCCceEcccCCCcCcHHHHH
Confidence 5555555555543221 22479999999987765543
No 349
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=26.10 E-value=3e+02 Score=23.32 Aligned_cols=98 Identities=10% Similarity=0.066 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHhCC--------CcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhh--
Q 016792 109 TVSQIIASHFYRQGLFEVGDCFISETKE--------SECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQ-- 178 (382)
Q Consensus 109 ~lnrlI~~hLlR~G~~e~a~~f~~Es~~--------~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~-- 178 (382)
..-..++..+.+.|.++.|..+.+++-. .. ......+..+..+ ....|+++.|++++.+--....+
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~--~~~~~~~~~la~~--~~~~g~~~~A~~~~~~al~~~~~~~ 103 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDH--PDVATMLNILALV--YRDQNKYKDAANLLNDALAIREKTL 103 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSS--HHHHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCC--HHHHHHHHHHHHH--HHHCCCHHHHHHHHHHHHHHHHHHh
Q ss_pred -cCCchhhhchHHHHHHHHHcCCHHHHHHHHHH
Q 016792 179 -NGSDLQLKLHSLQFVEILRKGSREEALKYARA 210 (382)
Q Consensus 179 -~~s~LeF~L~~q~fIeLl~~~~~~eAl~yar~ 210 (382)
.+.......+..--.-+...|+..+|+.+.++
T Consensus 104 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 136 (311)
T 3nf1_A 104 GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKR 136 (311)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHH
No 350
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.93 E-value=23 Score=21.93 Aligned_cols=16 Identities=19% Similarity=0.586 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2em7_A 11 KPYKCEECGKGFICRR 26 (46)
T ss_dssp CSEECSSSCCEESCHH
T ss_pred cCccCCCccchhCCHH
Confidence 4689999999887543
No 351
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=25.93 E-value=33 Score=29.15 Aligned_cols=39 Identities=23% Similarity=0.533 Sum_probs=30.7
Q ss_pred cccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHH
Q 016792 317 FQFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKM 355 (382)
Q Consensus 317 ~~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l 355 (382)
..|| .-|.|-.|+..+...+..+....|.+||+.+..++
T Consensus 141 ~~~H~~CF~C~~C~~~L~~g~~f~~~~~g~~yC~~cy~~~ 180 (182)
T 2jtn_A 141 FVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETA 180 (182)
T ss_dssp EECCTTTCCCTTTCCCCCTTCEEEECTTSCEECHHHHHHH
T ss_pred CCEEeCCCcCCCCCCCCCCCCceEEccCCEEECHHHHHHh
Confidence 4566 78999999998876554556779999999988765
No 352
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.90 E-value=23 Score=21.99 Aligned_cols=16 Identities=19% Similarity=0.600 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2eoo_A 11 RPYGCNECGKNFGRHS 26 (46)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCEEccccCcccCCHH
Confidence 3689999999887643
No 353
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.90 E-value=23 Score=21.87 Aligned_cols=16 Identities=25% Similarity=0.505 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2emm_A 11 RPHKCNECGKSFIQSA 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeeCCCCChhhCCHH
Confidence 4689999999887643
No 354
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.87 E-value=22 Score=22.04 Aligned_cols=16 Identities=13% Similarity=0.478 Sum_probs=12.4
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2emy_A 11 NPYECHECGKAFSRKY 26 (46)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred cCcCCCCCCcccCcHH
Confidence 3689999999887543
No 355
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=25.51 E-value=53 Score=20.43 Aligned_cols=10 Identities=0% Similarity=0.145 Sum_probs=8.1
Q ss_pred CccccCCCCC
Q 016792 361 RTFKCPYCPS 370 (382)
Q Consensus 361 ~~~kCP~c~~ 370 (382)
..|+|++|++
T Consensus 39 k~~~C~~C~k 48 (48)
T 2epr_A 39 KPYSSGPSSG 48 (48)
T ss_dssp CCCCSCCCCC
T ss_pred CCccCCCCCC
Confidence 4699999974
No 356
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=25.16 E-value=1.8e+02 Score=20.48 Aligned_cols=94 Identities=13% Similarity=0.203 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchH
Q 016792 110 VSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHS 189 (382)
Q Consensus 110 lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~ 189 (382)
.-..++..+.+.|.++.|..+.++.-... +.....+..+ ..-....|+.+.|+.+++.--. ....+. ..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~l--a~~~~~~~~~~~A~~~~~~~~~---~~~~~~--~~~~ 81 (125)
T 1na0_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELD--PNNAEAWYNL--GNAYYKQGDYDEAIEYYQKALE---LDPNNA--EAWY 81 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHH--HHHHHHTTCHHHHHHHHHHHHH---HCTTCH--HHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHC--cCcHHHHHHH--HHHHHHhCCHHHHHHHHHHHHH---hCCccH--HHHH
Confidence 34457788889999998888776652111 1112222222 2223457999999999876421 111111 1111
Q ss_pred HHHHHHHHcCCHHHHHHHHHHhc
Q 016792 190 LQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 190 q~fIeLl~~~~~~eAl~yar~~l 212 (382)
.--.-+...|+..+|+.+.++-+
T Consensus 82 ~la~~~~~~~~~~~A~~~~~~~~ 104 (125)
T 1na0_A 82 NLGNAYYKQGDYDEAIEYYQKAL 104 (125)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHH
Confidence 22223446788999998887643
No 357
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.12 E-value=21 Score=22.17 Aligned_cols=16 Identities=19% Similarity=0.526 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2em8_A 11 KPYKCVECGKGYKRRL 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeECcccCchhCCHH
Confidence 4689999999887543
No 358
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=25.11 E-value=41 Score=23.95 Aligned_cols=47 Identities=13% Similarity=0.106 Sum_probs=35.6
Q ss_pred ccc-cceeccccccccCCCCCCeeccCchhhhH-HHHHHHHhcCCCccccCCCCCc
Q 016792 318 QFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCR-QSINKMSKNHSRTFKCPYCPSD 371 (382)
Q Consensus 318 ~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~-~~l~~l~~~~~~~~kCP~c~~~ 371 (382)
.|| .-|.|..|+..++.. ++....|.+||+ .+..++. ..+|-.|+..
T Consensus 22 ~~H~~CF~C~~C~~~L~~~--~~~~~~g~~yC~~~cy~~~f-----~~~C~~C~~~ 70 (76)
T 1iml_A 22 DWHRPCLKCEKCGKTLTSG--GHAEHEGKPYCNHPCYSAMF-----GPKGFGRGGA 70 (76)
T ss_dssp EEETTTCBCTTTCCBCCTT--TEEEETTEEEETTTHHHHHS-----SCCCSSCCCS
T ss_pred cccCCCCCccccCccCCCC--ceECcCCeEeeCHHHHHHHh-----CccCCCcCCc
Confidence 455 579999999998765 577889999998 5887653 2478888643
No 359
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.10 E-value=16 Score=22.60 Aligned_cols=16 Identities=25% Similarity=0.679 Sum_probs=12.4
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (45)
T 2epu_A 11 KPFECTHCGKSFRAKG 26 (45)
T ss_dssp CSEEETTTTEEESSHH
T ss_pred cCccCCCCCCccCChH
Confidence 3689999999887543
No 360
>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=25.08 E-value=60 Score=22.89 Aligned_cols=24 Identities=25% Similarity=0.227 Sum_probs=18.3
Q ss_pred HHHHHHHH--cCChHHHHHHHHhcch
Q 016792 151 YQILEAMK--SGNLEPALKWAAANSD 174 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n~~ 174 (382)
.+.+.+|+ ++|++.|++|+-.+..
T Consensus 24 ~~a~~AL~~~~~nve~A~e~L~~~~~ 49 (63)
T 1wji_A 24 EASRQALMDNGNNLEAALNVLLTSNK 49 (63)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 34566776 5899999999988753
No 361
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=25.04 E-value=24 Score=21.83 Aligned_cols=16 Identities=19% Similarity=0.636 Sum_probs=12.4
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2el6_A 11 NPYKCSQCEKSFSGKL 26 (46)
T ss_dssp CSEECSSSSCEESSHH
T ss_pred CCeECCCCCcccCCHH
Confidence 3689999999887543
No 362
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=25.03 E-value=59 Score=27.14 Aligned_cols=50 Identities=18% Similarity=0.359 Sum_probs=37.6
Q ss_pred ccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcc
Q 016792 318 QFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 318 ~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~ 375 (382)
.|| .-|.|..|+..++..+ + ...|.+||+.+-.++.. .+|..|.+.+...
T Consensus 28 ~wH~~CF~C~~C~~~L~~~~--f-~~~g~~yC~~~y~~~f~-----~~C~~C~~~I~~~ 78 (169)
T 2rgt_A 28 HWHSKCLKCSDCHVPLAERC--F-SRGESVYCKDDFFKRFG-----TKCAACQLGIPPT 78 (169)
T ss_dssp EECTTTSBCTTTCCBCCSCC--E-ESSSCEECHHHHHHHHS-----CBCTTTCCBCCTT
T ss_pred EEccccCccCCCCCcCCCCC--c-ccCCeeeeccccccccc-----ccccccccccCCC
Confidence 566 6799999999987653 4 57899999999887642 3777777766543
No 363
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=24.89 E-value=2.3e+02 Score=21.49 Aligned_cols=94 Identities=14% Similarity=0.058 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchH
Q 016792 110 VSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHS 189 (382)
Q Consensus 110 lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~ 189 (382)
.-..++..+++.|.++.|.....++-... +.....+..+ ..-....|+++.|++++..-- ....... ..+.
T Consensus 15 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~~--a~~~~~~~~~~~A~~~~~~a~---~~~~~~~--~~~~ 85 (166)
T 1a17_A 15 ELKTQANDYFKAKDYENAIKFYSQAIELN--PSNAIYYGNR--SLAYLRTECYGYALGDATRAI---ELDKKYI--KGYY 85 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHH--HHHHHHTTCHHHHHHHHHHHH---HHCTTCH--HHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhC--CCChHHHHHH--HHHHHHcCCHHHHHHHHHHHH---HhCcccH--HHHH
Confidence 34567788888999988887766542111 1122222222 222355799999999997642 2111221 2222
Q ss_pred HHHHHHHHcCCHHHHHHHHHHhc
Q 016792 190 LQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 190 q~fIeLl~~~~~~eAl~yar~~l 212 (382)
..-.-+...|+..+|+.+.++-+
T Consensus 86 ~~a~~~~~~~~~~~A~~~~~~a~ 108 (166)
T 1a17_A 86 RRAASNMALGKFRAALRDYETVV 108 (166)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHH
Confidence 23333456788999998888654
No 364
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.85 E-value=56 Score=22.88 Aligned_cols=24 Identities=33% Similarity=0.585 Sum_probs=18.3
Q ss_pred HHHHHHHH--cCChHHHHHHHHhcch
Q 016792 151 YQILEAMK--SGNLEPALKWAAANSD 174 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n~~ 174 (382)
.+.+.+|+ ++|++.|++|+-.|.+
T Consensus 24 ~~a~~AL~~t~~nve~A~e~L~~~~~ 49 (63)
T 2dak_A 24 DQALKALRATNNSLERAVDWIFSHID 49 (63)
T ss_dssp HHHHHHHHHTTSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 35566666 5899999999988754
No 365
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.82 E-value=51 Score=23.67 Aligned_cols=40 Identities=20% Similarity=0.479 Sum_probs=30.8
Q ss_pred cccc-cceeccccccccCCCCCCee-ccCchhhhHHHHHHHHh
Q 016792 317 FQFH-SIFVCPVSKEQTSDDNPPMI-MSCGHVLCRQSINKMSK 357 (382)
Q Consensus 317 ~~~h-S~~~Cpi~~~~~~~~Npp~~-l~cGhv~~~~~l~~l~~ 357 (382)
..|| .-|.|..|+..+.+.. .+. ...|.+||+.+-.++..
T Consensus 35 ~~~H~~CF~C~~C~~~L~~g~-~f~~~~~~~~~C~~c~~~~~~ 76 (81)
T 1x6a_A 35 FKYHPECFACMSCKVIIEDGD-AYALVQHATLYCGKCHNEVVS 76 (81)
T ss_dssp CCBCTTSCBCTTTCCBCCTTS-CEEECSSSCEEEHHHHHHHHC
T ss_pred ceeccccCCccCCCCccCCCC-cEEEeeCCEEECHHHHHHHhc
Confidence 4567 6799999999986543 455 48999999999887653
No 366
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.76 E-value=25 Score=21.76 Aligned_cols=16 Identities=13% Similarity=0.494 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2emp_A 11 KPYMCNECGKAFSVYS 26 (46)
T ss_dssp CSEECSSSCCEESCHH
T ss_pred cCeECCCCCchhCCHH
Confidence 3689999999887543
No 367
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=24.68 E-value=24 Score=22.98 Aligned_cols=15 Identities=27% Similarity=0.645 Sum_probs=11.9
Q ss_pred CccccCCCCCcCCcc
Q 016792 361 RTFKCPYCPSDIDAA 375 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~ 375 (382)
..++|+.|++.|...
T Consensus 23 k~~~C~~C~k~f~~~ 37 (54)
T 1yui_A 23 QPATCPICYAVIRQS 37 (54)
T ss_dssp CCEECTTTCCEESSH
T ss_pred CCccCCCCCcccCCH
Confidence 468999999988654
No 368
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=24.68 E-value=47 Score=26.23 Aligned_cols=40 Identities=20% Similarity=0.461 Sum_probs=30.7
Q ss_pred cccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHh
Q 016792 317 FQFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSK 357 (382)
Q Consensus 317 ~~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~ 357 (382)
..|| .-|.|-.|+..+.... .+....|.+||+.+..++..
T Consensus 30 ~~~H~~CF~C~~C~~~L~~g~-~f~~~~g~~yC~~cy~~~~~ 70 (123)
T 2l3k_A 30 KVYHLECFKCAACQKHFSVGD-RYLLINSDIVCEQDIYEWTK 70 (123)
T ss_dssp CCCCTTTCBCTTTCCBCCTTC-EEEECSSSEEEGGGHHHHHH
T ss_pred cccccccCccccCCCCCCCCC-cEEeeCCEEEcHHHhHHHhc
Confidence 4566 7899999999985433 46777899999998887743
No 369
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.63 E-value=47 Score=24.53 Aligned_cols=38 Identities=18% Similarity=0.312 Sum_probs=30.7
Q ss_pred cccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHH
Q 016792 317 FQFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMS 356 (382)
Q Consensus 317 ~~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~ 356 (382)
..|| .-|.|..|+..+... .+....|.+||+.+..++.
T Consensus 45 ~~~H~~CF~C~~C~~~L~~~--~f~~~~g~~yC~~cy~~~f 83 (90)
T 2dar_A 45 KSWHPEEFNCAHCKNTMAYI--GFVEEKGALYCELCYEKFF 83 (90)
T ss_dssp EEECTTTCBCSSSCCBCSSS--CBEESSSCEECHHHHHHHT
T ss_pred ccccccCCccCCCCCCCCCC--EeEeECCEEECHHHHHHHc
Confidence 3567 569999999998754 4678899999999988764
No 370
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=24.45 E-value=16 Score=28.31 Aligned_cols=47 Identities=17% Similarity=0.363 Sum_probs=33.0
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcC
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDI 372 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~ 372 (382)
+.-.+.|.-|=. .|--++-=+-|.+|..||..|.+.+ -.||.|+...
T Consensus 25 ~~G~~nCKsCWf----~~k~LV~C~dHYLCl~CLtlmL~~S---drCpIC~~pL 71 (99)
T 2ko5_A 25 HLGPQFCKSCWF----ENKGLVECNNHYLCLNCLTLLLSVS---NRCPICKMPL 71 (99)
T ss_dssp CSCCCCCCSSCS----CCSSEEECSSCEEEHHHHHHTCSSS---SEETTTTEEC
T ss_pred ccCcccChhhcc----ccCCeeeecchhhHHHHHHHHHhhc---cCCcccCCcC
Confidence 444566666654 3334555667999999999998765 4899998653
No 371
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.36 E-value=25 Score=21.69 Aligned_cols=16 Identities=25% Similarity=0.627 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2enc_A 11 KPFKCEECGKGFYTNS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCcCCCCCCCcCCChH
Confidence 4689999999887543
No 372
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.34 E-value=2.2e+02 Score=21.08 Aligned_cols=98 Identities=9% Similarity=0.057 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhh-hHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhh
Q 016792 108 HTVSQIIASHFYRQGLFEVGDCFISETKESECSAA-ILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLK 186 (382)
Q Consensus 108 ~~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~-~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~ 186 (382)
...-..++..+++.|.++.|....++.-....+.. ....+..+. .-.+..|+++.|++++...- .....+ ..
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~~~---~~~~~~--~~ 100 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRA--ACHLKLEDYDKAETEASKAI---EKDGGD--VK 100 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH--HHHHHTTCHHHHHHHHHHHH---HHTSCC--HH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHHHHHccHHHHHHHHHHHH---hhCccC--HH
Confidence 34455678888999999888887776532220111 122222222 22356799999999997642 211122 22
Q ss_pred chHHHHHHHHHcCCHHHHHHHHHHhc
Q 016792 187 LHSLQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 187 L~~q~fIeLl~~~~~~eAl~yar~~l 212 (382)
.+...-.-+...|+..+|+.+.++-+
T Consensus 101 ~~~~~a~~~~~~~~~~~A~~~~~~al 126 (148)
T 2dba_A 101 ALYRRSQALEKLGRLDQAVLDLQRCV 126 (148)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 22333334556789999999988654
No 373
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=24.13 E-value=2.7e+02 Score=22.16 Aligned_cols=93 Identities=15% Similarity=0.042 Sum_probs=57.4
Q ss_pred HHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHH
Q 016792 112 QIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQ 191 (382)
Q Consensus 112 rlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~ 191 (382)
..++..+++.|.++.|....+.+-... +.....+..+..+. ...|+.+.|++.++.-- .+...+....| .-
T Consensus 40 ~~lg~~~~~~g~~~eA~~~~~~al~~~--P~~~~~~~~lg~~~--~~~g~~~~Ai~~~~~al-~l~P~~~~~~~----~l 110 (151)
T 3gyz_A 40 YSYAYDFYNKGRIEEAEVFFRFLCIYD--FYNVDYIMGLAAIY--QIKEQFQQAADLYAVAF-ALGKNDYTPVF----HT 110 (151)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHH--HHTTCHHHHHHHHHHHH-HHSSSCCHHHH----HH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHH--HHHccHHHHHHHHHHHH-hhCCCCcHHHH----HH
Confidence 356788899999998888876652212 23333333333322 35799999999987642 22222222322 33
Q ss_pred HHHHHHcCCHHHHHHHHHHhcC
Q 016792 192 FVEILRKGSREEALKYARANLA 213 (382)
Q Consensus 192 fIeLl~~~~~~eAl~yar~~l~ 213 (382)
-.-+.+.|+..+|+.+.++-+.
T Consensus 111 g~~~~~lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 111 GQCQLRLKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 3445678999999999987554
No 374
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.11 E-value=26 Score=21.66 Aligned_cols=16 Identities=19% Similarity=0.625 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytd_A 11 KPYKCSECGKAFHRHT 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCeECCCCCCeeCChH
Confidence 3689999999887543
No 375
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.10 E-value=23 Score=21.82 Aligned_cols=16 Identities=19% Similarity=0.559 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 ~~~~C~~C~k~F~~~~ 26 (46)
T 2eoe_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSSEETTTTEECSSHH
T ss_pred CCeECCCcChhhCCHH
Confidence 4689999999887643
No 376
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=24.04 E-value=1.5e+02 Score=19.21 Aligned_cols=38 Identities=13% Similarity=0.432 Sum_probs=21.6
Q ss_pred HHHHHHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhh
Q 016792 6 IKDAFDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKS 44 (382)
Q Consensus 6 ~~~~~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~ 44 (382)
+++.+.|+ ||-++....-.+.++++|..|.+..+++++
T Consensus 8 lrkkiarl-kkdnlqlerdeqnlekiianlrdeiarlen 45 (52)
T 3he5_B 8 LRKKIARL-KKDNLQLERDEQNLEKIIANLRDEIARLEN 45 (52)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hhhhhhhhhhHhhHHHHHHHHHHHHHHHHH
Confidence 34555555 555555555566667666666555555543
No 377
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=24.02 E-value=34 Score=18.84 Aligned_cols=15 Identities=27% Similarity=0.826 Sum_probs=11.6
Q ss_pred ccccC--CCCCcCCccc
Q 016792 362 TFKCP--YCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP--~c~~~~~~~~ 376 (382)
.++|+ .|++.|....
T Consensus 2 p~~C~~~~C~k~f~~~~ 18 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSD 18 (31)
T ss_dssp CCBCCSTTCCCBCSSHH
T ss_pred CcCCcCCCCCcccCCHh
Confidence 47898 9999987543
No 378
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=23.88 E-value=4.4e+02 Score=24.47 Aligned_cols=90 Identities=12% Similarity=0.190 Sum_probs=59.3
Q ss_pred CCHHHHHHHHHHHHHHhCcHHHHHHHHHHhCCC-------------------cchhhhHHHHHHHHHHHHHHHcCChHHH
Q 016792 105 FDTHTVSQIIASHFYRQGLFEVGDCFISETKES-------------------ECSAAILSIFEDMYQILEAMKSGNLEPA 165 (382)
Q Consensus 105 ~~~~~lnrlI~~hLlR~G~~e~a~~f~~Es~~~-------------------~~~~~~~~~f~~~~~I~~~L~~gdl~~A 165 (382)
+-...++.+|+.++.++|.+..|+.-.- .|.. . .+...+.| -.+.|+.-|.-||+..|
T Consensus 131 ~Gdp~LH~~~a~~~~~e~~~~~A~~H~i-~~~~~s~~~~a~~l~~w~~~~~~~-~~~e~dlf-~~RaVL~yL~l~n~~~A 207 (312)
T 2wpv_A 131 FGDPYLHNTIGSKLLEGDFVYEAERYFM-LGTHDSMIKYVDLLWDWLCQVDDI-EDSTVAEF-FSRLVFNYLFISNISFA 207 (312)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHHH-TSCHHHHHHHHHHHHHHHHHTTCC-CHHHHHHH-HHHHHHHHHHTTBHHHH
T ss_pred CCCHHHHHHHHHHHhhcCCHHHHHHHHH-hCCCccHHHHHHHHHHHHHhcCCC-CcchHHHH-HHHHHHHHHHhcCHHHH
Confidence 3456899999999999998877776221 1110 1 12334445 45677888888999999
Q ss_pred HHHHHhcchHhhh-----------cCCchhh--hchHHHHHHHHH
Q 016792 166 LKWAAANSDKLTQ-----------NGSDLQL--KLHSLQFVEILR 197 (382)
Q Consensus 166 l~W~~~n~~~L~~-----------~~s~LeF--~L~~q~fIeLl~ 197 (382)
-.-...-...+.+ .++.+.| ..-.++|+.+|-
T Consensus 208 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~pllnF~~lLl 252 (312)
T 2wpv_A 208 HESKDIFLERFIEKFHPKYEKIDKNGYEIVFFEDYSDLNFLQLLL 252 (312)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEETTEEEEEESSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcccccccccccccCCCCCCCCccHHHHHHHH
Confidence 8887766555532 2355565 467788888763
No 379
>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=23.84 E-value=70 Score=21.19 Aligned_cols=22 Identities=14% Similarity=0.292 Sum_probs=17.5
Q ss_pred HHHHHHHH--cCChHHHHHHHHhc
Q 016792 151 YQILEAMK--SGNLEPALKWAAAN 172 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n 172 (382)
.+++.+|+ .||++.|++|+-.+
T Consensus 23 ~~a~~AL~~~~~n~e~A~e~L~~g 46 (49)
T 1ify_A 23 ERVVAALRASYNNPHRAVEYLLTG 46 (49)
T ss_dssp HHHHHHHHTTTSCSHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhC
Confidence 46677887 58999999998664
No 380
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=23.81 E-value=2.2e+02 Score=21.25 Aligned_cols=65 Identities=8% Similarity=0.038 Sum_probs=36.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHhhhhhhhhHhhHHHHHHHHHHHHHHH
Q 016792 22 SKTQEVIDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQDIAPLGQLEGTQKELNIALSKYTKIL 88 (382)
Q Consensus 22 ~~~~~~id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~k~~~~~~~k~~k~i 88 (382)
...+..+|.+..=|.++...+....+.. .-+..++..+++...+..--..|+..-..+...|..+
T Consensus 5 ~~f~~~l~el~~WL~e~e~~l~~~~~~~--~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L 69 (118)
T 3uul_A 5 DSYQIALEEVLTWLLSAEDTFQEQDDIS--DDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQL 69 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCCCC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888999999999988887643221 1123344444443344433334444444455555444
No 381
>2o6n_A RH4B designed peptide; right-handed, tetramer, de novo protein; HET: CGU; 1.10A {Synthetic} SCOP: k.17.1.1 PDB: 1tgg_A*
Probab=23.64 E-value=1.1e+02 Score=18.37 Aligned_cols=31 Identities=29% Similarity=0.381 Sum_probs=18.9
Q ss_pred chHHHHHHHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHh
Q 016792 3 LNDIKDAFDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVK 43 (382)
Q Consensus 3 ~~~~~~~~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~ 43 (382)
.+..++|+.-++||.+- .+++++..|+.+|+
T Consensus 4 ieqakkeiaylikkake----------eileeikkakqeia 34 (35)
T 2o6n_A 4 IEQAKKEIAYLIKKAKE----------EILEEIKKAKQEIA 34 (35)
T ss_dssp HHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHhc
Confidence 45566777777776443 45566666766653
No 382
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=23.63 E-value=2.4e+02 Score=21.24 Aligned_cols=67 Identities=16% Similarity=0.298 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCC--------------hHHHHHHHHHHHHhh-hhhhhhHhhHHHHHHHHHHHHHHHhh
Q 016792 26 EVIDLIVQEIEKALETVKSASHLD--------------DKYVLTELKRRLQDI-APLGQLEGTQKELNIALSKYTKILEK 90 (382)
Q Consensus 26 ~~id~~~~~l~~~~~~~~~~~~~~--------------~~~~l~~l~~~~~~~-~~~~~~~~~~k~~~~~~~k~~k~idk 90 (382)
+.++.-++++..+.++|...++.. ...+...|...++.+ ..++.+++..+.+...+.++.+.|..
T Consensus 25 ~~l~~~~~e~~~~~~EL~~l~~d~~vy~~iG~vfv~~~~~e~~~~L~~~~e~i~~~i~~le~~~~~~~~~l~~lk~~l~~ 104 (107)
T 1fxk_A 25 QTVEMQINETQKALEELSRAADDAEVYKSSGNILIRVAKDELTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQE 104 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCchHHHHHhHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666667777777776643221 267777777777665 34567777777777777777766665
Q ss_pred cC
Q 016792 91 SF 92 (382)
Q Consensus 91 ~f 92 (382)
.|
T Consensus 105 ~~ 106 (107)
T 1fxk_A 105 AM 106 (107)
T ss_dssp TC
T ss_pred Hh
Confidence 54
No 383
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=23.55 E-value=23 Score=21.87 Aligned_cols=16 Identities=19% Similarity=0.555 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ema_A 11 KRYKCNECGKVFSRNS 26 (46)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred cCcCCCCCcchhCCHH
Confidence 3689999999887543
No 384
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.50 E-value=27 Score=21.58 Aligned_cols=16 Identities=19% Similarity=0.646 Sum_probs=12.6
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2ep0_A 11 KPYKCDVCHKSFRYGS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeeCcccCcccCChH
Confidence 4689999999887643
No 385
>3zx6_A HAMP, methyl-accepting chemotaxis protein I; signaling, HAMP domain, TSR receptor, fusion; 2.65A {Archaeoglobus fulgidus}
Probab=23.49 E-value=4.4e+02 Score=24.37 Aligned_cols=31 Identities=10% Similarity=0.214 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhhhhhchhhhHHHHHHHHHHH
Q 016792 5 DIKDAFDRVAKKQKLSCSKTQEVIDLIVQEI 35 (382)
Q Consensus 5 ~~~~~~~~~~~k~~~~~~~~~~~id~~~~~l 35 (382)
-|-+|+-+|+.+-+.........|+.+.+.+
T Consensus 185 VVAdEVRkLAe~t~~at~~I~~~i~~~~~~v 215 (341)
T 3zx6_A 185 VVAGEVRNLAQRSAQAAREIKSLIEDSVGKV 215 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667888887764443333334444333333
No 386
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.43 E-value=27 Score=21.52 Aligned_cols=16 Identities=13% Similarity=0.260 Sum_probs=12.5
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2yso_A 11 KSHQCRECGEIFFQYV 26 (46)
T ss_dssp CCEECTTTCCEESSHH
T ss_pred CCEEccccChhhCCHH
Confidence 3689999999887543
No 387
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=23.17 E-value=50 Score=28.01 Aligned_cols=50 Identities=18% Similarity=0.359 Sum_probs=37.0
Q ss_pred ccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcc
Q 016792 318 QFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 318 ~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~ 375 (382)
.|| .-|.|..|+..++..+ + ...|.+||+.+-.++. ..+|..|.+.+...
T Consensus 82 ~wH~~CF~C~~C~~~L~~~~--f-~~~g~~yC~~~y~~~f-----~~kC~~C~~~I~~~ 132 (182)
T 2jtn_A 82 HWHSKCLKCSDCHVPLAERC--F-SRGESVYCKDDFFKRF-----GTKCAACQLGIPPT 132 (182)
T ss_dssp EECSSTTSCTTTCCCCSSCC--E-EETTEEECHHHHHHTT-----SCCCTTTCCCCCSS
T ss_pred eEccccCccCCCCCccCCCc--e-eECCEeeecCcccccc-----ccccccCCCccCCC
Confidence 566 6799999999987653 4 4799999999987653 24777777765543
No 388
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=23.02 E-value=75 Score=22.38 Aligned_cols=24 Identities=21% Similarity=0.432 Sum_probs=18.2
Q ss_pred HHHHHHHH---cCChHHHHHHHHhcch
Q 016792 151 YQILEAMK---SGNLEPALKWAAANSD 174 (382)
Q Consensus 151 ~~I~~~L~---~gdl~~Al~W~~~n~~ 174 (382)
.+.+.+|+ ++|++.|++|+-+|.+
T Consensus 24 ~~a~~AL~~t~~~nve~A~ewLl~~~~ 50 (64)
T 1whc_A 24 GRAEKALALTGNQGIEAAMDWLMEHED 50 (64)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHhCCC
Confidence 35566665 5899999999988754
No 389
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=22.96 E-value=1.5e+02 Score=29.83 Aligned_cols=20 Identities=5% Similarity=0.169 Sum_probs=7.8
Q ss_pred hHhhHHHHHHHHHHHHHHHh
Q 016792 70 LEGTQKELNIALSKYTKILE 89 (382)
Q Consensus 70 ~~~~~k~~~~~~~k~~k~id 89 (382)
|...+++...-|.|+-..||
T Consensus 136 LQsnLedq~~kIQRLEvDId 155 (562)
T 3ghg_A 136 LQKNVRAQLVDMKRLEVDID 155 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333333333444443343
No 390
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.73 E-value=22 Score=22.05 Aligned_cols=16 Identities=19% Similarity=0.619 Sum_probs=12.4
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ysp_A 11 KPYKCEKCGKGYNSKF 26 (46)
T ss_dssp CSEEETTTTEEESCHH
T ss_pred CCeECCCCCCccCCHH
Confidence 4689999999887543
No 391
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.65 E-value=38 Score=22.90 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=20.5
Q ss_pred cCchhhhHHHHHHHHh-cCCCccccC-CCCCcCCcc
Q 016792 342 SCGHVLCRQSINKMSK-NHSRTFKCP-YCPSDIDAA 375 (382)
Q Consensus 342 ~cGhv~~~~~l~~l~~-~~~~~~kCP-~c~~~~~~~ 375 (382)
-||-.+.+..|..-.+ .+...++|+ .|++.|...
T Consensus 15 ~C~k~f~~~~L~~H~~~~~~~p~~C~~~C~k~f~~~ 50 (66)
T 2eod_A 15 YCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAR 50 (66)
T ss_dssp SSCCEEEHHHHHHHHHHCSSSEEECTTCCSCCEEET
T ss_pred ccCCccCHHHHHHHHHHcCCcCccCCcccCcccccH
Confidence 3555555444544222 233469999 999987654
No 392
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.64 E-value=1.3e+02 Score=21.37 Aligned_cols=14 Identities=21% Similarity=0.297 Sum_probs=11.4
Q ss_pred cccCCCCCcCCccc
Q 016792 363 FKCPYCPSDIDAAQ 376 (382)
Q Consensus 363 ~kCP~c~~~~~~~~ 376 (382)
++|++|++.|....
T Consensus 63 ~~C~~C~k~f~~~~ 76 (95)
T 2ej4_A 63 EECPREGKSFKAKY 76 (95)
T ss_dssp TTCSSTTCCCSSHH
T ss_pred cCCCCCCcccCCHH
Confidence 89999999987543
No 393
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=22.32 E-value=63 Score=27.60 Aligned_cols=39 Identities=23% Similarity=0.467 Sum_probs=32.0
Q ss_pred cccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHh
Q 016792 317 FQFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSK 357 (382)
Q Consensus 317 ~~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~ 357 (382)
..|| .-|.|..|+..+... ++....|.+||+.+..++..
T Consensus 28 ~~wH~~CF~C~~C~~~L~~~--~~~~~~g~~yC~~cy~~~f~ 67 (192)
T 1b8t_A 28 SSFHKSCFLCMVCKKNLDST--TVAVHGDEIYCKSCYGKKYG 67 (192)
T ss_dssp EEECTTTCBCTTTCCBCCSS--SEEEETTEEEEHHHHHHHHS
T ss_pred ceecCCCCcCcccCCcCCCC--eeEecCCEeeChhhhHhhcC
Confidence 3566 789999999998764 47778999999999998853
No 394
>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=22.25 E-value=75 Score=23.06 Aligned_cols=23 Identities=35% Similarity=0.531 Sum_probs=18.0
Q ss_pred HHHHHHHH--cCChHHHHHHHHhcc
Q 016792 151 YQILEAMK--SGNLEPALKWAAANS 173 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n~ 173 (382)
.+.+.+|+ +||++.|++|+-.|.
T Consensus 44 ~~a~~AL~~t~~nve~Ave~L~~~~ 68 (73)
T 1wiv_A 44 DVARKALKASGGDIEKATDWVFNNS 68 (73)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhCC
Confidence 35566776 589999999998774
No 395
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=22.22 E-value=4.4e+02 Score=25.35 Aligned_cols=11 Identities=0% Similarity=0.099 Sum_probs=5.0
Q ss_pred HHHHHHHHHHH
Q 016792 52 YVLTELKRRLQ 62 (382)
Q Consensus 52 ~~l~~l~~~~~ 62 (382)
..+..+.+.++
T Consensus 88 ~y~~~~~~~lk 98 (390)
T 1deq_A 88 TLTKNIVELMR 98 (390)
T ss_pred HHHHHHHHHHH
Confidence 34444444444
No 396
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.99 E-value=22 Score=21.99 Aligned_cols=16 Identities=13% Similarity=0.538 Sum_probs=12.4
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2en6_A 11 KPYGCNECGKTFSQKS 26 (46)
T ss_dssp CCEEETTTTEEESSHH
T ss_pred cCeECCCCCcccCchH
Confidence 3689999999887543
No 397
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=21.96 E-value=59 Score=26.02 Aligned_cols=21 Identities=24% Similarity=0.188 Sum_probs=18.0
Q ss_pred HHHHHHHH--cCChHHHHHHHHh
Q 016792 151 YQILEAMK--SGNLEPALKWAAA 171 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~ 171 (382)
.+|+++|+ +||.+.|++|+-.
T Consensus 91 ~~a~~AL~~~~nd~erAlewL~~ 113 (118)
T 4ae4_A 91 KDIKEVLLLHNNDQDNALEDLMA 113 (118)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHH
Confidence 57889987 6999999999864
No 398
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.85 E-value=24 Score=21.86 Aligned_cols=16 Identities=25% Similarity=0.661 Sum_probs=12.4
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|+.|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2en1_A 11 KPFKCEECGKRFTQNS 26 (46)
T ss_dssp CSEEETTTTEEESSHH
T ss_pred CCeeCCCCCcccCCHH
Confidence 4689999999887543
No 399
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=21.83 E-value=3.5e+02 Score=22.49 Aligned_cols=20 Identities=15% Similarity=-0.009 Sum_probs=9.4
Q ss_pred HHHHHHHHhCcHHHHHHHHH
Q 016792 113 IIASHFYRQGLFEVGDCFIS 132 (382)
Q Consensus 113 lI~~hLlR~G~~e~a~~f~~ 132 (382)
.++..+.+.|.++.|....+
T Consensus 48 ~l~~~~~~~~~~~~A~~~~~ 67 (275)
T 1xnf_A 48 ERGVLYDSLGLRALARNDFS 67 (275)
T ss_dssp HHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHHH
Confidence 34444445555554444443
No 400
>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=21.81 E-value=79 Score=22.29 Aligned_cols=23 Identities=22% Similarity=0.450 Sum_probs=17.7
Q ss_pred HHHHHHHH--cC-ChHHHHHHHHhcc
Q 016792 151 YQILEAMK--SG-NLEPALKWAAANS 173 (382)
Q Consensus 151 ~~I~~~L~--~g-dl~~Al~W~~~n~ 173 (382)
.+.+.+|+ .| |++.|++|+-+|.
T Consensus 34 ~~a~~AL~~t~~~nve~A~ewL~~~~ 59 (64)
T 2cpw_A 34 ARAQKALASTGGRSVQTACDWLFSHS 59 (64)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHSCC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHhCC
Confidence 45667776 35 8999999998774
No 401
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=21.53 E-value=20 Score=30.16 Aligned_cols=10 Identities=40% Similarity=0.836 Sum_probs=8.0
Q ss_pred cccCCCCCcC
Q 016792 363 FKCPYCPSDI 372 (382)
Q Consensus 363 ~kCP~c~~~~ 372 (382)
..||.|+...
T Consensus 149 ~~Cp~CG~~~ 158 (165)
T 2lcq_A 149 GVCPDCGSKV 158 (165)
T ss_dssp GBCTTTCCBE
T ss_pred CcCCCCCCcc
Confidence 4899999863
No 402
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=21.41 E-value=3.3e+02 Score=26.94 Aligned_cols=62 Identities=15% Similarity=0.269 Sum_probs=33.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHhhhhhhhhHhhHHHHHHHHHHHHHHHhh
Q 016792 22 SKTQEVIDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQDIAPLGQLEGTQKELNIALSKYTKILEK 90 (382)
Q Consensus 22 ~~~~~~id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~k~~~~~~~k~~k~idk 90 (382)
.+.++.|+.-+++|+...++|.+.+ ......+..|+..+ ++.+....+....++++.+.|++
T Consensus 92 ~k~q~~V~~~LqeLe~~l~~lsn~T-s~~~~~i~~Iq~sl------k~~Q~Qi~en~n~~~~~~~~~e~ 153 (464)
T 1m1j_B 92 LKQEKTVKPVLRDLKDRVAKFSDTS-TTMYQYVNMIDNKL------VKTQKQRKDNDIILSEYNTEMEL 153 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhHhHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHh------hcccccccchhhHHHHHHHHHHH
Confidence 3566777777777777777776511 01222333333333 33444455555556666655553
No 403
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.30 E-value=35 Score=23.96 Aligned_cols=37 Identities=16% Similarity=0.323 Sum_probs=29.2
Q ss_pred cccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHH
Q 016792 317 FQFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKM 355 (382)
Q Consensus 317 ~~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l 355 (382)
..|| .-|.|..|+..++. .++....|.+||+.+-.++
T Consensus 29 ~~wH~~CF~C~~C~~~L~~--~~f~~~~g~~yC~~c~~~~ 66 (72)
T 1x4l_A 29 RQWHNDCFNCKKCSLSLVG--RGFLTERDDILCPDCGKDI 66 (72)
T ss_dssp CEECTTTCBCSSSCCBCTT--SCCEECSSSEECHHHHHTC
T ss_pred cccCcccCEeccCCCcCCC--CccEeECCEEEChhHcCcc
Confidence 3567 56999999998864 3677789999999988654
No 404
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=21.15 E-value=34 Score=24.36 Aligned_cols=35 Identities=17% Similarity=0.419 Sum_probs=27.3
Q ss_pred ccc-cceeccccccccCCCCCCeeccCchhhhHHHHHH
Q 016792 318 QFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINK 354 (382)
Q Consensus 318 ~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~ 354 (382)
.|| +-|.|..|+..++.. ++....|.+||+.+-.+
T Consensus 41 ~~H~~CF~C~~C~~~L~~~--~f~~~~~~~yC~~cy~~ 76 (77)
T 2egq_A 41 SWHDYCFHCKKCSVNLANK--RFVFHQEQVYCPDCAKK 76 (77)
T ss_dssp EEETTTCBCSSSCCBCTTS--CCCEETTEECCHHHHHH
T ss_pred eeCcccCEehhcCCCCCCC--ccEeECCEEEChHHhcc
Confidence 566 569999999988743 57788899999887654
No 405
>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.02 E-value=88 Score=23.35 Aligned_cols=23 Identities=13% Similarity=0.424 Sum_probs=17.1
Q ss_pred HHHHHHH--cCChHHHHHHHHhcch
Q 016792 152 QILEAMK--SGNLEPALKWAAANSD 174 (382)
Q Consensus 152 ~I~~~L~--~gdl~~Al~W~~~n~~ 174 (382)
+.+.+|+ ++|++.|++|+-+|..
T Consensus 45 ~a~~AL~~t~~nve~A~ewL~~~~~ 69 (83)
T 2dai_A 45 RATKALQLNHMSVPQAMEWLIEHAE 69 (83)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHGGG
T ss_pred HHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 3445555 6899999999988753
No 406
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=20.99 E-value=2.6e+02 Score=27.08 Aligned_cols=116 Identities=15% Similarity=0.124 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCChHhhhccccCCHHHHHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHH
Q 016792 74 QKELNIALSKYTKILEKSFNPDISKAYRNIEFDTHTVSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQI 153 (382)
Q Consensus 74 ~k~~~~~~~k~~k~idk~f~~~l~~~~~~~~~~~~~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I 153 (382)
.+++..++.-+.++|+. .++. ...-..++.-+.+.|.++.|....+++-... +.....+..+..+
T Consensus 19 ~g~~~~A~~~~~~Al~~--~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~--p~~~~~~~~lg~~ 83 (477)
T 1wao_1 19 AKDYENAIKFYSQAIEL--NPSN-----------AIYYGNRSLAYLRTECYGYALGDATRAIELD--KKYIKGYYRRAAS 83 (477)
T ss_dssp TTCHHHHHHHHHHHHHH--CTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC--TTCHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHh--CCcc-----------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--CCCHHHHHHHHHH
Confidence 45566677777777763 2221 2334457778889999998888776652212 2233333333332
Q ss_pred HHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHHHHHHHHcCCHHHHHHHHH
Q 016792 154 LEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQFVEILRKGSREEALKYAR 209 (382)
Q Consensus 154 ~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~fIeLl~~~~~~eAl~yar 209 (382)
....|+.+.|+++.++- +.....+-+.....-....+++.|+..+|+++.+
T Consensus 84 --~~~~g~~~eA~~~~~~a---l~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 84 --NMALGKFRAALRDYETV---VKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp --HHHHTCHHHHHHHHHHH---HHHSTTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred --HHHcCCHHHHHHHHHHH---HHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 23469999999999864 2222222222222223334556677888888877
No 407
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=20.97 E-value=59 Score=23.83 Aligned_cols=21 Identities=24% Similarity=0.727 Sum_probs=12.6
Q ss_pred HHHHHHhcCCCccccCCCCCc
Q 016792 351 SINKMSKNHSRTFKCPYCPSD 371 (382)
Q Consensus 351 ~l~~l~~~~~~~~kCP~c~~~ 371 (382)
-+.++.........||+|++.
T Consensus 16 ~vkkie~~q~~ky~C~fCgk~ 36 (73)
T 1ffk_W 16 RVRDVEIKHKKKYKCPVCGFP 36 (73)
T ss_pred HHHHHHHhcccCccCCCCCCc
Confidence 344443333346899999874
No 408
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.92 E-value=51 Score=22.89 Aligned_cols=38 Identities=26% Similarity=0.538 Sum_probs=31.0
Q ss_pred ccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHh
Q 016792 318 QFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSK 357 (382)
Q Consensus 318 ~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~ 357 (382)
.|| .-|.|-.|+..+.+. .+....|.+||+.+-.++..
T Consensus 26 ~~H~~CF~C~~C~~~L~~~--~f~~~~g~~yC~~c~~~~~~ 64 (70)
T 2d8x_A 26 SWHPECFRCDLCQEVLADI--GFVKNAGRHLCRPCHNREKA 64 (70)
T ss_dssp EECTTTSBCSSSCCBCSSS--CCEEETTEEECHHHHHHHHC
T ss_pred cccccCCEeCCCCCcCCCC--ccEeECCeEECHHHhhhhcC
Confidence 566 569999999998765 46678999999999887754
No 409
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=20.90 E-value=3.9e+02 Score=22.76 Aligned_cols=88 Identities=8% Similarity=-0.032 Sum_probs=0.0
Q ss_pred HHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHHHH
Q 016792 114 IASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQFV 193 (382)
Q Consensus 114 I~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~fI 193 (382)
.+..+++.|.++.|..+.++.--.. +.....+..+..+ ....|+++.|++++...-.. .+-....+..--.
T Consensus 27 ~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~l~~~--~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~la~ 97 (327)
T 3cv0_A 27 EGLSMLKLANLAEAALAFEAVCQAA--PEREEAWRSLGLT--QAENEKDGLAIIALNHARML-----DPKDIAVHAALAV 97 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHH-----CTTCHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhC--CCCHHHHHHHHHH--HHHcCCHHHHHHHHHHHHhc-----CcCCHHHHHHHHH
Q ss_pred HHHHcCCHHHHHHHHHH
Q 016792 194 EILRKGSREEALKYARA 210 (382)
Q Consensus 194 eLl~~~~~~eAl~yar~ 210 (382)
-+...|+..+|+.+.++
T Consensus 98 ~~~~~~~~~~A~~~~~~ 114 (327)
T 3cv0_A 98 SHTNEHNANAALASLRA 114 (327)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHH
No 410
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=20.85 E-value=3.5e+02 Score=22.23 Aligned_cols=96 Identities=13% Similarity=0.056 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHhCC--CcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhh
Q 016792 109 TVSQIIASHFYRQGLFEVGDCFISETKE--SECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLK 186 (382)
Q Consensus 109 ~lnrlI~~hLlR~G~~e~a~~f~~Es~~--~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~ 186 (382)
.+...++..+.+.|.++.|....++.-. .. +.....+..+. .-.+..|+++.|++++++-- ........
T Consensus 106 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~--~~~~~~~~~la--~~~~~~g~~~~A~~~~~~~~---~~~~~~~~-- 176 (252)
T 2ho1_A 106 RVLNNYGGFLYEQKRYEEAYQRLLEASQDTLY--PERSRVFENLG--LVSLQMKKPAQAKEYFEKSL---RLNRNQPS-- 176 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTC--TTHHHHHHHHH--HHHHHTTCHHHHHHHHHHHH---HHCSCCHH--
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhCccC--cccHHHHHHHH--HHHHHcCCHHHHHHHHHHHH---hcCcccHH--
Confidence 3445677888899999999888877643 22 22223332222 23356799999999998642 21112222
Q ss_pred chHHHHHHHHHcCCHHHHHHHHHHhcC
Q 016792 187 LHSLQFVEILRKGSREEALKYARANLA 213 (382)
Q Consensus 187 L~~q~fIeLl~~~~~~eAl~yar~~l~ 213 (382)
.+..--.-+...|+..+|+.+.++-+.
T Consensus 177 ~~~~la~~~~~~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 177 VALEMADLLYKEREYVPARQYYDLFAQ 203 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 122222234567899999999987654
No 411
>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=20.80 E-value=67 Score=24.15 Aligned_cols=25 Identities=20% Similarity=0.203 Sum_probs=19.4
Q ss_pred HHHHHHHH--cCChHHHHHHHHhcchH
Q 016792 151 YQILEAMK--SGNLEPALKWAAANSDK 175 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n~~~ 175 (382)
.+++.+|+ +||++.|++|+-.|...
T Consensus 44 ~~A~~AL~~t~gdve~A~e~L~sh~~~ 70 (83)
T 1veg_A 44 VVAEAALRVFGGNVQLAAQTLAHHGGS 70 (83)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 35567776 58999999999987653
No 412
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.70 E-value=67 Score=23.70 Aligned_cols=38 Identities=24% Similarity=0.447 Sum_probs=30.5
Q ss_pred cccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHH
Q 016792 317 FQFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMS 356 (382)
Q Consensus 317 ~~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~ 356 (382)
..|| .-|.|-.|+..+... ++....|.+||+.+..++.
T Consensus 36 ~~~H~~CF~C~~C~~~L~~~--~~~~~~g~~yC~~~y~~~f 74 (91)
T 2d8y_A 36 QVFHISCFRCSYCNNKLSLG--TYASLHGRIYCKPHFNQLF 74 (91)
T ss_dssp SEEETTTCBCTTTCCBCCTT--TCCCSSSCCCCHHHHHHHS
T ss_pred CEECCCCCeeCCCCCCCCCC--CcEeECCEEECHHHHHHHh
Confidence 3566 679999999988764 3677899999999998764
No 413
>3ter_A Mammalian stromal interaction molecule-1; dimer, metal binding protein; 2.55A {Caenorhabditis elegans}
Probab=20.63 E-value=2.6e+02 Score=22.86 Aligned_cols=12 Identities=42% Similarity=0.537 Sum_probs=5.5
Q ss_pred HHHHHHHHHhhh
Q 016792 6 IKDAFDRVAKKQ 17 (382)
Q Consensus 6 ~~~~~~~~~~k~ 17 (382)
.+++.||+-||.
T Consensus 64 Ake~~eKlkKKr 75 (136)
T 3ter_A 64 AIEMVDRLQKKQ 75 (136)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHhh
Confidence 344555555553
No 414
>3sxm_A Transcriptional regulator, GNTR family; transcription factor, metal-binding, structur genomics, PSI-2, protein structure initiative; 1.55A {Thermotoga maritima} PDB: 3sxk_A 3sxz_A
Probab=20.57 E-value=1e+02 Score=24.07 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHHHHcCChHHHHHHHHhcc
Q 016792 143 ILSIFEDMYQILEAMKSGNLEPALKWAAANS 173 (382)
Q Consensus 143 ~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~ 173 (382)
......+...|+++|++||.+.|-+.+..|-
T Consensus 96 ~~~~~~eH~~I~~Ai~~~D~~~A~~~~~~Hl 126 (140)
T 3sxm_A 96 YVVSNREHKELIERIISGDKEGAIEKLKEHL 126 (140)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3455677899999999999999999998873
No 415
>2p06_A Hypothetical protein AF_0060; MCSG, PSI2, MAD, structural genomics, singleton, predicted C region AF_0060; 2.10A {Archaeoglobus fulgidus dsm 4304} SCOP: a.204.1.3
Probab=20.36 E-value=80 Score=23.69 Aligned_cols=45 Identities=20% Similarity=0.383 Sum_probs=30.3
Q ss_pred hCcHHHHHHHHHHhCCC-----------c------c-hhhhHHHHHHHHHHHHHHHcCChHHH
Q 016792 121 QGLFEVGDCFISETKES-----------E------C-SAAILSIFEDMYQILEAMKSGNLEPA 165 (382)
Q Consensus 121 ~G~~e~a~~f~~Es~~~-----------~------~-~~~~~~~f~~~~~I~~~L~~gdl~~A 165 (382)
..||..|+.|.+|..-. . + ...+...|.+|..+++++...||+-.
T Consensus 22 mdyfrlaekflremhakymkrvsrpgntprpwfdfseerllsrlfeemdelreavekedwenl 84 (114)
T 2p06_A 22 MDYFRLAEKFLREMHAKYMKRVSRPGNTPRPWFDFSEERLLSRLFEEMDELREAVEKEDWENL 84 (114)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSTTCCSCHHHHSCHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHccCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677777777664321 1 0 12355689999999999999888643
No 416
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=20.20 E-value=67 Score=27.44 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=38.1
Q ss_pred cccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCc
Q 016792 317 FQFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSD 371 (382)
Q Consensus 317 ~~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~ 371 (382)
..|| +-|.|..|+..++.. .+....|.+||+.+-.++. ..+|..|+..
T Consensus 136 ~~~H~~CF~C~~C~~~L~~~--~~~~~~g~~yC~~cy~~~f-----~~kc~~C~~~ 184 (192)
T 1b8t_A 136 KSWHKSCFRCAKCGKSLEST--TLADKDGEIYCKGCYAKNF-----GPKGFGFGQG 184 (192)
T ss_dssp EEECTTTCBCTTTCCBCCSS--SEEEETTEEEEHHHHHHHT-----CCCCCCCCCC
T ss_pred CccchhcCCccccCCCCCCC--cccccCCEEeCHHHHHHhc-----CCcCCCCCCc
Confidence 3566 679999999998654 4678999999999998774 2488888865
No 417
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=20.17 E-value=1.6e+02 Score=30.00 Aligned_cols=119 Identities=16% Similarity=0.210 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHH-hCcH---HHHHHHHHHhC--CCcchhhhHHHHHHHHHHHHHHHcCC--hHHHHHHHHhcchHhhh-
Q 016792 108 HTVSQIIASHFYR-QGLF---EVGDCFISETK--ESECSAAILSIFEDMYQILEAMKSGN--LEPALKWAAANSDKLTQ- 178 (382)
Q Consensus 108 ~~lnrlI~~hLlR-~G~~---e~a~~f~~Es~--~~~~~~~~~~~f~~~~~I~~~L~~gd--l~~Al~W~~~n~~~L~~- 178 (382)
+.-.-+++--|+| +||. |+-+.|..+.| ....-..+..-...+++-..-...|+ ++.|+.|...+=..+..
T Consensus 124 Dl~~~al~FRlLR~hGy~Vs~dvF~~Fkd~~G~~F~~~l~~dv~glL~LY~As~l~~~gE~iLdeA~~Ft~~~L~~~~~~ 203 (569)
T 2j5c_A 124 DLYSTALRFRLLRQYDFSVSQEVFDCFKNAKGTDFKPSLVDDTRGLLQLYEASFLSAQGEETLRLARDFATKFLQKRVLV 203 (569)
T ss_dssp CHHHHHHHHHHHHHTTCCCCGGGGGGGBCSSSSSBCGGGGGCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHTTSSCC--
T ss_pred ChhhhhHHhHHHHhcCCCcCHHHHhcccCCCCCccccchhhccHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHhh
Confidence 3445577888888 6775 55566665655 22100123333333444332222333 78899998776222211
Q ss_pred c-C--------Cchhh----hchHH---HHHHHHHcCC--HHHHHHHHHHhcCCchhhhHHHHHHH
Q 016792 179 N-G--------SDLQL----KLHSL---QFVEILRKGS--REEALKYARANLAPFASNHVNEIQKL 226 (382)
Q Consensus 179 ~-~--------s~LeF----~L~~q---~fIeLl~~~~--~~eAl~yar~~l~~f~~~~~~eiq~l 226 (382)
. . ..|++ .|.++ .||+...+.+ -..-++.|+-.|.-.+..|.+|++.+
T Consensus 204 ~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~EL~~l 269 (569)
T 2j5c_A 204 DKDINLLSSIERALELPTHWRVQMPNARSFIDAYKRRPDMNPTVLELAKLDFNMVQAQFQQELKEA 269 (569)
T ss_dssp --CHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHhcCccccCcHHHHHHHHHHHhccCccccHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 1 1 12332 33333 4677665432 34567888887777777777777654
No 418
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.12 E-value=60 Score=22.46 Aligned_cols=38 Identities=13% Similarity=0.322 Sum_probs=30.4
Q ss_pred cccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHH
Q 016792 317 FQFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMS 356 (382)
Q Consensus 317 ~~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~ 356 (382)
..|| .-|.|..|+..++. ..+....|.+||+.+..++.
T Consensus 25 ~~~H~~CF~C~~C~~~L~~--~~~~~~~~~~yC~~cy~~~f 63 (69)
T 2cur_A 25 QPWHADCFVCVTCSKKLAG--QRFTAVEDQYYCVDCYKNFV 63 (69)
T ss_dssp EEECTTTTBCTTTCCBCTT--SCEEECSSCEEEHHHHHHHH
T ss_pred cccccCcCEECCCCCCCCC--CccEeECCEEECHHHhHHHh
Confidence 3566 56999999998864 35778899999999988764
No 419
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.01 E-value=74 Score=22.12 Aligned_cols=39 Identities=18% Similarity=0.299 Sum_probs=31.1
Q ss_pred cccc-cceeccccccccCCCCCCeeccCchhhhHHHHHHHHh
Q 016792 317 FQFH-SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSK 357 (382)
Q Consensus 317 ~~~h-S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~ 357 (382)
..|| .-|.|..|+..++. ..+....|.+||+.+-.++..
T Consensus 27 ~~~H~~CF~C~~C~~~L~~--~~~~~~~~~~yC~~cy~~~~~ 66 (72)
T 1x61_A 27 RVFHVGCFVCSTCRAQLRG--QHFYAVERRAYCEGCYVATLE 66 (72)
T ss_dssp SEECTTTCBCSSSCCBCTT--SCEEESSSCEEEHHHHHHHHH
T ss_pred CeEcccCCcccccCCcCCc--CcCEeeCCeEECHHHHHHHHc
Confidence 3566 46999999999853 467788999999999988764
Done!