Query 016792
Match_columns 382
No_of_seqs 262 out of 821
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 03:51:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016792.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016792hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2baya1 g.44.1.2 (A:1-56) Pre- 99.0 7.8E-11 5.7E-15 83.2 3.6 53 323-381 1-54 (56)
2 d2c2la2 g.44.1.2 (A:225-304) S 99.0 9.4E-11 6.8E-15 88.8 3.0 53 321-378 6-58 (80)
3 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.0 1.5E-10 1.1E-14 91.8 4.0 58 319-379 18-75 (103)
4 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 98.9 2.3E-10 1.7E-14 86.1 3.9 53 321-378 7-59 (78)
5 d1rmda2 g.44.1.1 (A:1-86) V(D) 98.9 3.3E-10 2.4E-14 86.9 4.2 53 321-378 22-74 (86)
6 d1fbva4 g.44.1.1 (A:356-434) C 98.8 1.5E-09 1.1E-13 81.9 4.2 53 323-380 24-76 (79)
7 d1g25a_ g.44.1.1 (A:) TFIIH Ma 98.7 4.3E-09 3.1E-13 76.2 4.1 58 323-382 4-63 (65)
8 d1wgma_ g.44.1.2 (A:) Ubiquiti 98.7 3.8E-09 2.8E-13 82.9 3.6 51 322-378 22-73 (98)
9 d1ur6b_ g.44.1.1 (B:) Not-4 N- 98.6 6.7E-09 4.9E-13 71.8 2.7 49 324-374 2-51 (52)
10 d1bora_ g.44.1.1 (A:) Acute pr 98.5 7E-09 5.1E-13 72.8 1.3 46 322-376 6-51 (56)
11 d1jm7b_ g.44.1.1 (B:) bard1 RI 98.5 9.6E-09 7E-13 80.2 0.4 52 319-378 19-71 (97)
12 d1chca_ g.44.1.1 (A:) Immediat 98.4 3.7E-08 2.7E-12 71.8 2.7 45 324-373 7-51 (68)
13 d1iyma_ g.44.1.1 (A:) EL5 RING 98.2 2.5E-07 1.8E-11 64.4 2.4 47 323-372 6-53 (55)
14 d1v87a_ g.44.1.1 (A:) Deltex p 98.2 4.7E-07 3.5E-11 72.3 4.4 53 323-375 26-95 (114)
15 d3dplr1 g.44.1.1 (R:19-106) RI 98.0 1.7E-06 1.3E-10 65.9 3.9 37 337-376 51-87 (88)
16 d1wima_ g.44.1.1 (A:) UbcM4-in 97.7 5.1E-06 3.7E-10 63.7 2.4 48 322-369 5-57 (94)
17 d1vyxa_ g.44.1.3 (A:) IE1B pro 97.5 2.4E-05 1.8E-09 54.8 3.4 49 322-374 6-59 (60)
18 d1uuja_ a.221.1.1 (A:) Lissenc 93.4 0.075 5.4E-06 38.1 5.7 32 107-138 7-38 (76)
19 d2nxpa1 d.379.1.1 (A:195-343) 87.7 0.9 6.6E-05 36.4 8.0 63 167-229 29-91 (149)
20 d1wila_ g.50.1.3 (A:) Hypothet 86.4 0.44 3.2E-05 34.3 4.6 63 308-371 1-76 (89)
21 d2j4ba1 d.379.1.1 (A:18-148) T 78.6 1.4 9.8E-05 34.5 5.2 61 167-228 11-71 (131)
22 d2gmga1 a.4.5.82 (A:1-105) Hyp 74.9 0.2 1.5E-05 37.9 -0.8 29 336-372 66-94 (105)
23 d2adra1 g.37.1.1 (A:102-130) A 71.9 0.67 4.8E-05 26.6 1.2 15 362-376 2-16 (29)
24 d1weoa_ g.44.1.1 (A:) Cellulos 70.2 3.7 0.00027 29.4 5.1 56 317-374 11-70 (93)
25 d2g0ua1 a.2.20.1 (A:1-84) BsaL 69.7 8.2 0.0006 27.4 7.0 53 10-71 18-70 (84)
26 d1wjpa2 g.37.1.1 (A:43-66) Zin 66.6 0.67 4.9E-05 25.1 0.3 15 364-378 2-16 (26)
27 d1a1ia2 g.37.1.1 (A:132-159) Z 65.7 0.75 5.4E-05 26.2 0.4 15 362-376 3-17 (28)
28 d2ct1a2 g.37.1.1 (A:8-43) Tran 65.7 0.86 6.2E-05 27.4 0.7 17 361-377 7-23 (36)
29 d2efla1 a.238.1.4 (A:1-288) Fo 64.4 36 0.0026 28.1 14.1 32 68-99 181-212 (288)
30 d1sp1a_ g.37.1.1 (A:) Transcri 63.5 1.4 0.0001 25.1 1.4 15 362-376 2-16 (29)
31 d1hxia_ a.118.8.1 (A:) Peroxin 61.2 14 0.00099 26.6 7.4 90 114-212 22-111 (112)
32 d2dmda2 g.37.1.1 (A:8-33) Zinc 60.4 1.3 9.3E-05 24.0 0.7 15 363-377 2-16 (26)
33 d1vd4a_ g.41.3.1 (A:) Transcri 60.2 1.9 0.00014 29.2 1.8 39 322-375 14-52 (62)
34 d2j9ub1 g.41.11.1 (B:115-161) 59.8 2.3 0.00016 26.8 1.9 31 321-351 2-40 (47)
35 d2j49a1 d.379.1.1 (A:149-282) 59.2 2.8 0.0002 32.7 3.0 62 166-228 12-73 (134)
36 d1aipc1 a.5.2.2 (C:2-53) Elong 58.3 4.5 0.00032 26.3 3.4 22 151-172 18-41 (52)
37 d1xb2b1 a.5.2.2 (B:56-111) Elo 57.0 4.5 0.00033 26.7 3.2 22 151-172 20-43 (56)
38 d2jnya1 b.171.1.1 (A:1-59) Unc 56.2 1.5 0.00011 29.5 0.7 15 318-332 6-20 (59)
39 d2epqa1 g.37.1.1 (A:380-411) P 55.8 1.3 9.1E-05 25.2 0.2 15 362-376 3-17 (32)
40 d2cota2 g.37.1.1 (A:7-44) Zinc 55.2 2 0.00015 25.9 1.1 16 361-376 11-26 (38)
41 d1p7aa_ g.37.1.1 (A:) Kruppel- 55.2 2.3 0.00016 25.5 1.4 16 361-376 10-25 (37)
42 d1srka_ g.37.1.1 (A:) Zinc fin 54.9 1.9 0.00014 25.7 1.0 16 361-376 6-21 (35)
43 d1efub3 a.5.2.2 (B:1-54) Elong 52.9 6.1 0.00044 25.8 3.4 22 151-172 20-43 (54)
44 d2ca5a1 a.2.20.1 (A:20-78) Mxi 51.7 27 0.002 22.7 7.5 37 28-66 4-40 (59)
45 d2hf1a1 b.171.1.1 (A:2-60) Hyp 51.4 1.8 0.00013 29.1 0.4 14 320-333 5-18 (59)
46 d1elra_ a.118.8.1 (A:) Hop {Hu 50.0 41 0.003 24.3 9.5 97 112-213 8-107 (128)
47 d2ak3a2 g.41.2.1 (A:125-161) M 49.6 2.2 0.00016 25.8 0.6 19 321-339 1-20 (37)
48 d2fiya1 e.59.1.1 (A:19-308) Fd 48.8 0.69 5E-05 41.3 -2.7 12 361-372 203-214 (290)
49 d1ubdc4 g.37.1.1 (C:381-408) Y 48.4 4.1 0.0003 22.9 1.6 17 362-378 2-20 (28)
50 d1brfa_ g.41.5.1 (A:) Rubredox 47.9 0.61 4.4E-05 30.8 -2.4 10 362-371 35-44 (53)
51 d1njqa_ g.37.1.3 (A:) SUPERMAN 47.7 2 0.00015 25.9 0.2 17 361-377 4-20 (37)
52 d6rxna_ g.41.5.1 (A:) Rubredox 47.3 0.81 5.9E-05 29.1 -1.8 10 362-371 29-38 (45)
53 d1tjca_ a.118.8.1 (A:) Prolyl 46.2 32 0.0023 23.7 7.0 57 155-212 14-73 (95)
54 d1x4pa1 a.217.1.1 (A:8-60) Arg 45.6 19 0.0014 22.6 4.7 46 150-195 4-51 (53)
55 d1vq0a2 g.81.1.1 (A:231-287) H 45.4 3.8 0.00027 27.0 1.3 29 347-375 15-43 (57)
56 d2drpa2 g.37.1.1 (A:140-165) T 44.3 2.5 0.00018 22.7 0.2 14 363-376 2-15 (26)
57 d2glia3 g.37.1.1 (A:168-197) F 43.8 4.1 0.0003 23.3 1.1 16 362-377 2-19 (30)
58 d1nnqa2 g.41.5.1 (A:135-171) R 43.4 4.9 0.00035 24.2 1.5 15 321-335 4-18 (37)
59 d1x6ea2 g.37.1.1 (A:41-66) Zin 40.9 3.7 0.00027 22.7 0.6 15 362-376 2-16 (26)
60 d1x6ea1 g.37.1.1 (A:8-40) Zinc 40.5 4.5 0.00033 23.6 1.0 16 361-376 6-21 (33)
61 d1zfda_ g.37.1.1 (A:) SWI5 zin 40.2 5.9 0.00043 22.9 1.5 16 362-377 3-20 (32)
62 d2pk7a1 b.171.1.1 (A:3-61) Unc 39.9 4.1 0.0003 27.1 0.8 12 321-332 5-16 (59)
63 d1iroa_ g.41.5.1 (A:) Rubredox 39.6 1 7.4E-05 29.7 -2.3 10 362-371 36-45 (53)
64 d1sp2a_ g.37.1.1 (A:) Transcri 38.9 5.4 0.00039 22.9 1.1 16 362-377 2-19 (31)
65 d1x6ha2 g.37.1.1 (A:8-43) Tran 38.5 4.4 0.00032 24.0 0.7 16 361-376 7-22 (36)
66 d2csha1 g.37.1.1 (A:8-60) Zinc 36.8 8.7 0.00063 24.2 2.1 35 342-376 7-44 (53)
67 d1p91a_ c.66.1.33 (A:) rRNA me 34.5 4.3 0.00032 34.8 0.3 24 323-346 2-25 (268)
68 d2dlqa2 g.37.1.1 (A:35-62) GLI 34.3 6.5 0.00047 21.4 0.9 13 363-375 2-14 (28)
69 d1ubdc3 g.37.1.1 (C:351-380) Y 34.1 5 0.00036 22.8 0.4 16 362-377 2-19 (30)
70 d1a1ia1 g.37.1.1 (A:103-131) Z 33.8 5.1 0.00037 22.7 0.4 17 362-378 2-20 (29)
71 d2c2la1 a.118.8.1 (A:24-224) S 32.5 92 0.0067 23.2 9.1 89 114-211 10-98 (201)
72 d1ncsa_ g.37.1.1 (A:) SWI5 zin 31.6 7.3 0.00053 24.5 1.0 19 360-378 16-36 (47)
73 d1bboa1 g.37.1.1 (A:1-28) Enha 31.1 9.7 0.0007 21.0 1.3 14 363-376 2-15 (28)
74 d1w3ba_ a.118.8.1 (A:) O-GlcNA 31.0 1.1E+02 0.008 24.7 9.4 54 114-171 5-58 (388)
75 d1fxka_ a.2.5.1 (A:) Prefoldin 30.5 87 0.0063 22.3 9.7 65 27-91 26-105 (107)
76 d1hz4a_ a.118.8.2 (A:) Transcr 30.3 1.2E+02 0.0089 24.0 11.5 104 109-212 214-318 (366)
77 d1vzya2 g.81.1.1 (A:234-290) H 30.3 6.4 0.00047 25.7 0.6 29 347-375 16-45 (57)
78 d1oqya1 a.5.2.1 (A:160-200) DN 29.8 24 0.0017 21.3 3.2 19 151-169 19-39 (41)
79 d2cpwa1 a.5.2.1 (A:8-58) Cbl-i 29.7 21 0.0015 22.6 3.1 21 152-172 28-51 (51)
80 d1weva_ g.50.1.2 (A:) PHD fing 29.2 4 0.00029 29.0 -0.8 48 323-370 17-71 (88)
81 d1yuza2 g.41.5.1 (A:167-202) N 29.1 12 0.00088 22.2 1.6 9 363-371 21-29 (36)
82 d1wjia_ a.5.2.1 (A:) Tudor dom 28.8 22 0.0016 23.5 3.2 23 152-174 25-49 (63)
83 d2crna1 a.5.2.1 (A:8-58) Suppr 26.6 30 0.0021 21.8 3.4 21 153-173 19-42 (51)
84 d1a17a_ a.118.8.1 (A:) Protein 26.3 1.1E+02 0.0083 22.3 10.0 111 74-205 23-134 (159)
85 d1wgna_ a.5.2.1 (A:) Ubiquitin 25.8 27 0.002 23.1 3.2 23 151-173 34-58 (63)
86 d1xjha_ g.81.1.1 (A:) HSP33, C 25.7 8.3 0.0006 25.6 0.5 30 346-375 20-50 (62)
87 d1vqoz1 g.41.8.1 (Z:10-82) Rib 25.5 13 0.00094 25.6 1.5 10 362-371 27-36 (73)
88 d2epsa1 g.37.1.1 (A:408-446) P 25.2 8.6 0.00063 23.2 0.4 16 361-376 4-19 (39)
89 d2c2la1 a.118.8.1 (A:24-224) S 25.2 1.2E+02 0.0091 22.4 8.6 82 74-172 17-98 (201)
90 d1x5wa2 g.37.1.1 (A:36-64) Zin 25.0 11 0.0008 20.9 0.8 12 361-372 1-12 (29)
91 d1wiva_ a.5.2.1 (A:) Ubiquitin 24.9 29 0.0021 23.6 3.4 23 151-173 44-68 (73)
92 d1whca_ a.5.2.1 (A:) UBA/UBX 3 24.9 27 0.002 23.1 3.1 23 152-174 25-50 (64)
93 d1a6sa_ a.61.1.4 (A:) GAG poly 24.5 49 0.0035 23.1 4.4 52 206-260 10-61 (87)
94 d2id6a1 a.4.1.9 (A:1-75) Trans 24.2 51 0.0037 21.7 4.7 61 107-169 5-66 (75)
95 d1dx8a_ g.41.5.1 (A:) Rubredox 24.0 4.3 0.00032 28.0 -1.3 10 362-371 40-49 (70)
96 d1ibia1 g.39.1.3 (A:117-144) C 23.4 12 0.00085 20.7 0.7 9 364-372 3-11 (28)
97 d1xmka1 a.4.5.19 (A:294-366) Z 23.4 29 0.0021 23.8 3.0 47 107-162 3-50 (73)
98 d1koha2 d.58.7.2 (A:105-200) m 23.2 25 0.0018 25.4 2.8 41 339-382 18-58 (96)
99 d2dlqa4 g.37.1.1 (A:8-34) GLI- 22.6 15 0.0011 19.7 1.1 13 363-375 1-13 (27)
100 d2hs5a2 a.78.1.1 (A:94-231) Pu 22.4 48 0.0035 24.1 4.6 29 145-173 98-126 (138)
101 d1jj2y_ g.41.8.1 (Y:) Ribosoma 22.4 16 0.0012 25.1 1.4 10 362-371 27-36 (73)
102 d1jr3a1 a.80.1.1 (A:243-368) g 22.0 42 0.0031 24.4 4.2 23 150-172 7-29 (126)
103 d1veka_ a.5.2.1 (A:) Ubiquitin 21.9 31 0.0023 24.1 3.1 23 152-174 45-70 (84)
104 d1zbpa1 e.61.1.1 (A:2-265) Hyp 21.3 60 0.0044 27.1 5.5 55 153-212 3-57 (264)
105 d1a1ia3 g.37.1.1 (A:160-187) Z 21.0 9.8 0.00071 21.0 0.0 17 362-378 3-19 (28)
106 d1wa8a1 a.25.3.1 (A:1-99) ESAT 20.8 1.2E+02 0.0089 20.7 7.0 70 8-91 8-78 (99)
107 d2np5a1 a.4.1.9 (A:9-77) Trans 20.4 52 0.0038 21.2 3.9 58 107-166 3-61 (69)
108 d2akla2 g.41.3.5 (A:3-40) Hypo 20.4 17 0.0013 21.7 1.1 15 362-376 3-17 (38)
109 d2efka1 a.238.1.4 (A:10-288) C 20.2 2E+02 0.014 22.9 14.5 30 68-97 172-201 (279)
110 d2gfna1 a.4.1.9 (A:4-80) Proba 20.1 41 0.003 22.3 3.4 62 107-170 8-70 (77)
No 1
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.00 E-value=7.8e-11 Score=83.17 Aligned_cols=53 Identities=9% Similarity=0.268 Sum_probs=46.3
Q ss_pred eeccccccccCCCCCCeecc-CchhhhHHHHHHHHhcCCCccccCCCCCcCCcccccccc
Q 016792 323 FVCPVSKEQTSDDNPPMIMS-CGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLY 381 (382)
Q Consensus 323 ~~Cpi~~~~~~~~Npp~~l~-cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~ 381 (382)
++||||++.+.+ ||++| |||+|++++|.+|.+.+ .+||.|++..+.+++.++.
T Consensus 1 l~C~Ic~~~~~~---Pv~~~~cGh~fc~~cI~~~l~~~---~~CP~c~~~l~~~dLipik 54 (56)
T d2baya1 1 MLCAISGKVPRR---PVLSPKSRTIFEKSLLEQYVKDT---GNDPITNEPLSIEEIVEIV 54 (56)
T ss_dssp CCCTTTCSCCSS---EEEETTTTEEEEHHHHHHHHHHH---SBCTTTCCBCCGGGCEECC
T ss_pred CCCccCCchHHh---cCccCCCCCcccHHHHHHHHhhc---cCCCccCCcCCHHhceeCC
Confidence 589999999976 88875 99999999999998764 3899999999999987663
No 2
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.97 E-value=9.4e-11 Score=88.80 Aligned_cols=53 Identities=19% Similarity=0.177 Sum_probs=45.6
Q ss_pred cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 321 SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
.-|.||||++.|.+ ||++||||+||+.||.++...+ ...||.|+...+.+++.
T Consensus 6 ~~l~CpIc~~l~~d---Pv~~~cGhtfc~~ci~~~l~~~--~~~cP~c~~~l~~~~l~ 58 (80)
T d2c2la2 6 DYLCGKISFELMRE---PCITPSGITYDRKDIEEHLQRV--GHFNPVTRSPLTQEQLI 58 (80)
T ss_dssp STTBCTTTCSBCSS---EEECSSCCEEETTHHHHHHHHT--CSSCTTTCCCCCGGGCE
T ss_pred ccccCcCcCchhhh---hcccCCcCeecHHHHHHHHhcC--CccCCCccccccccccc
Confidence 36799999999988 9999999999999999987654 35899999988877654
No 3
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.96 E-value=1.5e-10 Score=91.82 Aligned_cols=58 Identities=24% Similarity=0.670 Sum_probs=49.1
Q ss_pred cccceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQ 379 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~ 379 (382)
+.+.+.||||.+.+.+ |+.+||||+||+.||.++.+...+..+||.|+..+...+++.
T Consensus 18 l~~~l~CpIC~~~~~~---pv~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~l~~ 75 (103)
T d1jm7a_ 18 MQKILECPICLELIKE---PVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQE 75 (103)
T ss_dssp HHHHTSCSSSCCCCSS---CCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBC
T ss_pred cccCcCCCccCchhCC---eEEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCChhhCCc
Confidence 4566899999999976 899999999999999999866544679999999998777654
No 4
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.93 E-value=2.3e-10 Score=86.08 Aligned_cols=53 Identities=32% Similarity=0.481 Sum_probs=46.2
Q ss_pred cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 321 SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
+.|.||||.+.|.+ ||+++|||+||+.||.++...+ ..+||.|+.....++++
T Consensus 7 ~~l~CpIc~~~m~d---PV~~~cgh~fc~~ci~~~~~~~--~~~cP~~~~~l~~~~l~ 59 (78)
T d1t1ha_ 7 EYFRCPISLELMKD---PVIVSTGQTYERSSIQKWLDAG--HKTCPKSQETLLHAGLT 59 (78)
T ss_dssp SSSSCTTTSCCCSS---EEEETTTEEEEHHHHHHHHTTT--CCBCTTTCCBCSSCCCE
T ss_pred ccCCCcCcCchhhC---ceEccCCCcchHHHHHHHHHHC--CCCCCcccccCCccccc
Confidence 46899999999988 9999999999999999987654 35899999998877654
No 5
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.91 E-value=3.3e-10 Score=86.86 Aligned_cols=53 Identities=25% Similarity=0.469 Sum_probs=46.2
Q ss_pred cceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 321 SIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
..+.||||.+.+.+ |+++||||+||+.||.++.+.. ..+||.|+..+...++.
T Consensus 22 ~~l~C~IC~~~~~~---pv~~~CgH~FC~~Ci~~~~~~~--~~~CP~Cr~p~~~~~l~ 74 (86)
T d1rmda2 22 KSISCQICEHILAD---PVETSCKHLFCRICILRCLKVM--GSYCPSCRYPCFPTDLE 74 (86)
T ss_dssp HHTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHT--CSBCTTTCCBCCGGGCB
T ss_pred cCcCCccCCcchhc---ceecCCCChhhHHHHHHHHhhC--CCcCcccCCCCChhhcc
Confidence 56899999999977 9999999999999999997654 34899999998887765
No 6
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79 E-value=1.5e-09 Score=81.85 Aligned_cols=53 Identities=23% Similarity=0.639 Sum_probs=43.9
Q ss_pred eeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccccc
Q 016792 323 FVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQL 380 (382)
Q Consensus 323 ~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v 380 (382)
.+||||.+.+.+ |+++||||+||++||.+|...+ ..+||.|+......+...|
T Consensus 24 ~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~wl~~~--~~~CP~Cr~~i~~~~~i~i 76 (79)
T d1fbva4 24 QLCKICAENDKD---VKIEPCGHLMCTSCLTSWQESE--GQGCPFCRCEIKGTEPIVV 76 (79)
T ss_dssp TBCTTTSSSBCC---EECSSSCCEECHHHHHHHHHTT--CCSCTTTCCCCCCCCCSSC
T ss_pred CCCccCCCcCCC---eEEeCCCCeeeHHHHHHHHHHC--cCcCCCCCcCccCCceeec
Confidence 479999998765 8999999999999999997653 3589999999887665443
No 7
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.70 E-value=4.3e-09 Score=76.23 Aligned_cols=58 Identities=24% Similarity=0.497 Sum_probs=45.6
Q ss_pred eeccccccccC--CCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 323 FVCPVSKEQTS--DDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 323 ~~Cpi~~~~~~--~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
..||||.+.+. .+-+.+..||||+|+.+||.+|.+.+ ..+||+|++.+..++.+...|
T Consensus 4 ~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~--~~~CP~CR~~i~~~~~~~~~f 63 (65)
T d1g25a_ 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRG--AGNCPECGTPLRKSNFRVQLF 63 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTT--SSSCTTTCCCCSSCCCEEECC
T ss_pred CCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcC--cCCCCCCCcCcccccccccCC
Confidence 47999988642 23334668999999999999997654 347999999999998887665
No 8
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.68 E-value=3.8e-09 Score=82.90 Aligned_cols=51 Identities=20% Similarity=0.344 Sum_probs=44.5
Q ss_pred ceeccccccccCCCCCCeeccCch-hhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGH-VLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGh-v~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
-|.||||++.|.+ ||++|||| +|++.||.++.+.+ .+||.|++....++++
T Consensus 22 ~f~CPI~~~lm~d---PV~~~~~~~ty~r~~I~~~l~~~---~~~P~~~~~l~~~~L~ 73 (98)
T d1wgma_ 22 EFLDPIMSTLMCD---PVVLPSSRVTVDRSTIARHLLSD---QTDPFNRSPLTMDQIR 73 (98)
T ss_dssp TTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHTTTS---CBCTTTCSBCCTTTSE
T ss_pred HhCCcCchhHHHH---HHhcccccchhhHHHHHHHHHhc---CCcccccccccchhhc
Confidence 5999999999998 99999875 89999999997653 4899999998887764
No 9
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.61 E-value=6.7e-09 Score=71.81 Aligned_cols=49 Identities=22% Similarity=0.497 Sum_probs=40.4
Q ss_pred eccccccccCCCCC-CeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 324 VCPVSKEQTSDDNP-PMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 324 ~Cpi~~~~~~~~Np-p~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
-||||.+.+++.+. +..++|||+|+.+++.+|.+.. ..+||.|++.+..
T Consensus 2 eCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~--~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 2 ECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDE--NGLCPACRKPYPE 51 (52)
T ss_dssp EETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTS--CCBCTTTCCBCSC
T ss_pred CCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhc--CCCCCccCCcCCC
Confidence 59999998876554 4567999999999999998764 4589999998764
No 10
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.55 E-value=7e-09 Score=72.82 Aligned_cols=46 Identities=20% Similarity=0.603 Sum_probs=39.0
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~ 376 (382)
.+.||||.+.+.+ |+++||||+|++.+|++ ...+||.|+..+..+.
T Consensus 6 ~l~C~IC~~~~~~---p~~lpCgH~fC~~Ci~~------~~~~CP~Cr~~~~~~~ 51 (56)
T d1bora_ 6 FLRCQQCQAEAKC---PKLLPCLHTLCSGCLEA------SGMQCPICQAPWPLGA 51 (56)
T ss_dssp CSSCSSSCSSCBC---CSCSTTSCCSBTTTCSS------SSSSCSSCCSSSSCCS
T ss_pred CCCCcccCcccCC---CEEecCCCHHhHHHHHc------CCCcCcCCCCcccCCC
Confidence 3689999998865 89999999999999852 2579999999988764
No 11
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.47 E-value=9.6e-09 Score=80.24 Aligned_cols=52 Identities=15% Similarity=0.517 Sum_probs=42.4
Q ss_pred cccceeccccccccCCCCCCeec-cCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccc
Q 016792 319 FHSIFVCPVSKEQTSDDNPPMIM-SCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 319 ~hS~~~Cpi~~~~~~~~Npp~~l-~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~ 378 (382)
+...+.||||.+.+.+ |+++ +|||+||+.||.++.. -+||.|+......+++
T Consensus 19 l~~~l~C~IC~~~~~~---pv~~~~CgH~fC~~Ci~~~~~-----~~CP~Cr~~~~~~~l~ 71 (97)
T d1jm7b_ 19 LEKLLRCSRCTNILRE---PVCLGGCEHIFCSNCVSDCIG-----TGCPVCYTPAWIQDLK 71 (97)
T ss_dssp HHHTTSCSSSCSCCSS---CBCCCSSSCCBCTTTGGGGTT-----TBCSSSCCBCSCSSCC
T ss_pred hhhcCCCccCCchhhc---CceeCCCCCchhHHHHHHHHh-----ccccccCCcCchhhCc
Confidence 3456799999999976 7775 8999999999998863 2699999988777654
No 12
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=98.43 E-value=3.7e-08 Score=71.75 Aligned_cols=45 Identities=29% Similarity=0.709 Sum_probs=38.5
Q ss_pred eccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCC
Q 016792 324 VCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDID 373 (382)
Q Consensus 324 ~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~ 373 (382)
.||||.+.+. +|++.+||||+|+.+|+.+|.+.+ .+||.|+..+.
T Consensus 7 ~C~IC~~~~~--~~~~~~~C~H~Fc~~Ci~~w~~~~---~~CP~CR~~i~ 51 (68)
T d1chca_ 7 RCPICLEDPS--NYSMALPCLHAFCYVCITRWIRQN---PTCPLCKVPVE 51 (68)
T ss_dssp CCSSCCSCCC--SCEEETTTTEEESTTHHHHHHHHS---CSTTTTCCCCC
T ss_pred CCccCCcCcc--CCcEEeCCCCcCcHHHHHHHHHhC---CcCCCCCcchH
Confidence 5999999885 467889999999999999998764 48999998754
No 13
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=98.20 E-value=2.5e-07 Score=64.42 Aligned_cols=47 Identities=21% Similarity=0.545 Sum_probs=39.6
Q ss_pred eeccccccccCCCCCCeec-cCchhhhHHHHHHHHhcCCCccccCCCCCcC
Q 016792 323 FVCPVSKEQTSDDNPPMIM-SCGHVLCRQSINKMSKNHSRTFKCPYCPSDI 372 (382)
Q Consensus 323 ~~Cpi~~~~~~~~Npp~~l-~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~ 372 (382)
..||||.+.+.+...++.+ +|||+|+.+++.+|.+.+ ..||+|+...
T Consensus 6 ~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~---~~CP~CR~~i 53 (55)
T d1iyma_ 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSH---STCPLCRLTV 53 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTC---CSCSSSCCCS
T ss_pred CCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHhC---CcCCCCCCEe
Confidence 4699999999877667776 599999999999998664 4899999764
No 14
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.20 E-value=4.7e-07 Score=72.25 Aligned_cols=53 Identities=17% Similarity=0.295 Sum_probs=40.0
Q ss_pred eeccccccccCCC--------------C-CCeeccCchhhhHHHHHHHHhcCC--CccccCCCCCcCCcc
Q 016792 323 FVCPVSKEQTSDD--------------N-PPMIMSCGHVLCRQSINKMSKNHS--RTFKCPYCPSDIDAA 375 (382)
Q Consensus 323 ~~Cpi~~~~~~~~--------------N-pp~~l~cGhv~~~~~l~~l~~~~~--~~~kCP~c~~~~~~~ 375 (382)
-.||||.+.+.+. . ..++++|||+|+.+||.+|.+... +.++||.|+..+...
T Consensus 26 ~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T d1v87a_ 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred ccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhccC
Confidence 3699998876431 1 235689999999999999987532 368999999887654
No 15
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.00 E-value=1.7e-06 Score=65.86 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=31.3
Q ss_pred CCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccc
Q 016792 337 PPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 337 pp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~ 376 (382)
+++.+||||+|...||.+|.+.+ -.||.|+.++....
T Consensus 51 ~~~~~~C~H~FH~~Ci~~Wl~~~---~~CP~CR~~~~~~~ 87 (88)
T d3dplr1 51 TVAWGVCNHAFHFHCISRWLKTR---QVCPLDNREWEFQK 87 (88)
T ss_dssp CEEEETTSCEEEHHHHHHHHTTC---SBCSSSCSBCCEEE
T ss_pred CeEEccccCcccHHHHHHHHHHC---CcCCCCCCcccccc
Confidence 46779999999999999998764 37999999987653
No 16
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.74 E-value=5.1e-06 Score=63.69 Aligned_cols=48 Identities=13% Similarity=0.347 Sum_probs=38.1
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHh-----cCCCccccCCCC
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSK-----NHSRTFKCPYCP 369 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~-----~~~~~~kCP~c~ 369 (382)
.-.||||-+.+..++.|.+++|||.||++|+.++.+ +....++||.|+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~ 57 (94)
T d1wima_ 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAA 57 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTT
T ss_pred CCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCC
Confidence 347999999988888788889999999999998754 222357999753
No 17
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=97.53 E-value=2.4e-05 Score=54.79 Aligned_cols=49 Identities=14% Similarity=0.294 Sum_probs=37.2
Q ss_pred ceeccccccccCCCCCCeeccC-----chhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSC-----GHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~c-----Ghv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
..+|+||.+.+++ +...|| ||+|...+|.+|....+ ..+||.|++.|+.
T Consensus 6 ~~~C~IC~~~~~~---~~~~~c~c~~c~h~~H~~Cl~~W~~~~~-~~~CP~Cr~~~~~ 59 (60)
T d1vyxa_ 6 VPVCWICNEELGN---ERFRACGCTGELENVHRSCLSTWLTISR-NTACQICGVVYNT 59 (60)
T ss_dssp CCEETTTTEECSC---CCCCSCCCSSGGGSCCHHHHHHHHHHHT-CSBCTTTCCBCCC
T ss_pred CCCCccCCccCCC---ceeEecccCCCCCEEcHHHHHHHHhhCC-CCCCcccCCeeec
Confidence 4589999987654 344444 69999999999975432 4689999999875
No 18
>d1uuja_ a.221.1.1 (A:) Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.38 E-value=0.075 Score=38.10 Aligned_cols=32 Identities=19% Similarity=0.188 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHhCCCc
Q 016792 107 THTVSQIIASHFYRQGLFEVGDCFISETKESE 138 (382)
Q Consensus 107 ~~~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~ 138 (382)
+..+|+.|++||..+|+.+++..|.+|+++..
T Consensus 7 ~eeL~kaI~~Yl~~~~~~~~~~~l~~e~~l~~ 38 (76)
T d1uuja_ 7 RDELNRAIADYLRSNGYEEAYSVFKKEAELDM 38 (76)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHCCcHHHHHHHHHHHCCCC
Confidence 46899999999999999999999999998864
No 19
>d2nxpa1 d.379.1.1 (A:195-343) TAF5 subunit of TFIID {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.73 E-value=0.9 Score=36.41 Aligned_cols=63 Identities=13% Similarity=0.111 Sum_probs=52.0
Q ss_pred HHHHhcchHhhhcCCchhhhchHHHHHHHHHcCCHHHHHHHHHHhcCCchhhhHHHHHHHHHh
Q 016792 167 KWAAANSDKLTQNGSDLQLKLHSLQFVEILRKGSREEALKYARANLAPFASNHVNEIQKLMAC 229 (382)
Q Consensus 167 ~W~~~n~~~L~~~~s~LeF~L~~q~fIeLl~~~~~~eAl~yar~~l~~f~~~~~~eiq~lm~~ 229 (382)
.|+.+.-+.-+..=+.+-|=+...-|++|+.+|...+|..|..++-+-|...|.++|++|.+.
T Consensus 29 ~wv~~sld~yK~EL~~lLyPvFvh~yL~Lv~~~~~~~A~~F~~kf~~~~~~~~~~~I~~L~~i 91 (149)
T d2nxpa1 29 HFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSL 91 (149)
T ss_dssp HHHHTSCHHHHHHHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGSCGGGHHHHHHHHTC
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhchhhhHHHHHHHHHHHcC
Confidence 577776554444346789999999999999999999999999988777888899999999764
No 20
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.41 E-value=0.44 Score=34.27 Aligned_cols=63 Identities=14% Similarity=0.198 Sum_probs=43.1
Q ss_pred CccccCCcccccccceeccccccccCCCCCCeeccCchhhhHHHHHHHH-hcC------------CCccccCCCCCc
Q 016792 308 PVPVELDKEFQFHSIFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMS-KNH------------SRTFKCPYCPSD 371 (382)
Q Consensus 308 p~~i~Lp~~~~~hS~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~-~~~------------~~~~kCP~c~~~ 371 (382)
|++|++.+.-+.-|--.|+|| +.++.+.-.=.--||.||-..||+++. .++ +.--.|+||..-
T Consensus 1 ~~~i~~~~re~v~~D~mC~vC-~v~t~~~l~pCRvCtRv~H~~CL~r~gyl~~e~a~e~~e~A~T~~GWSC~~C~nl 76 (89)
T d1wila_ 1 GSSGSSGPREPVVNDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CCCCCCCSCCCCCCSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CcccccCcccCCCcCcccccc-CcccccceecceeecchhhHHHHHHhcccccHHHHHHHHhhcCCCCcchhhhcch
Confidence 556666655567778899999 666665532233589999999999984 111 123789999653
No 21
>d2j4ba1 d.379.1.1 (A:18-148) TAF5 subunit of TFIID {Encephalitozoon cuniculi [TaxId: 6035]}
Probab=78.56 E-value=1.4 Score=34.51 Aligned_cols=61 Identities=15% Similarity=0.274 Sum_probs=47.3
Q ss_pred HHHHhcchHhhhcCCchhhhchHHHHHHHHHcCCHHHHHHHHHHhcCCchhhhHHHHHHHHH
Q 016792 167 KWAAANSDKLTQNGSDLQLKLHSLQFVEILRKGSREEALKYARANLAPFASNHVNEIQKLMA 228 (382)
Q Consensus 167 ~W~~~n~~~L~~~~s~LeF~L~~q~fIeLl~~~~~~eAl~yar~~l~~f~~~~~~eiq~lm~ 228 (382)
.|+.++-+.-+..=+.+-|=+...-|++|+.+|...+|..|..++-+.|. .|.++|+++.+
T Consensus 11 ~wv~~sld~yK~EL~~lLyPvFvh~yL~Lv~~~~~~~A~~F~~kf~~d~~-~~~~~i~~L~~ 71 (131)
T d2j4ba1 11 TWIEDSLDLFKNDLLPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDHY-NKSEEIKQFES 71 (131)
T ss_dssp HHHHHSCHHHHHHHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC---CHHHHHHHTT
T ss_pred HHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHccchHH-HHHHHHHHHHc
Confidence 67777655444334578899999999999999999999999998666563 57888998866
No 22
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=74.86 E-value=0.2 Score=37.89 Aligned_cols=29 Identities=28% Similarity=0.674 Sum_probs=21.2
Q ss_pred CCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcC
Q 016792 336 NPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDI 372 (382)
Q Consensus 336 Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~ 372 (382)
.||....||.||. + ++. ..-+||.|..+.
T Consensus 66 ~Pp~CrkCGfvFr-~---~~k----kPSRCP~CKSE~ 94 (105)
T d2gmga1 66 KPAQCRKCGFVFK-A---EIN----IPSRCPKCKSEW 94 (105)
T ss_dssp CCCBBTTTCCBCC-C---CSS----CCSSCSSSCCCC
T ss_pred eChhhhhcCCeec-c---cCC----CCCCCCCCCCcc
Confidence 4799999999993 2 221 235999998874
No 23
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=71.91 E-value=0.67 Score=26.57 Aligned_cols=15 Identities=20% Similarity=0.654 Sum_probs=12.7
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++||+|++.|+..+
T Consensus 2 p~~C~~C~k~F~~~~ 16 (29)
T d2adra1 2 SFVCEVCTRAFARQE 16 (29)
T ss_dssp CBCCTTTCCCBSCHH
T ss_pred cCCCCCCCCCCCCch
Confidence 589999999998764
No 24
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=70.16 E-value=3.7 Score=29.40 Aligned_cols=56 Identities=18% Similarity=0.371 Sum_probs=41.3
Q ss_pred cccccceecccccccc--CC-CCCCee-ccCchhhhHHHHHHHHhcCCCccccCCCCCcCCc
Q 016792 317 FQFHSIFVCPVSKEQT--SD-DNPPMI-MSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDA 374 (382)
Q Consensus 317 ~~~hS~~~Cpi~~~~~--~~-~Npp~~-l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~ 374 (382)
.+-.+--+|-||++.. +. ..+.|. --||--+|+.|.+-=.+.+ .--||.|+..|..
T Consensus 11 ~~~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG--~q~CpqCkt~Ykr 70 (93)
T d1weoa_ 11 LKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREG--TQNCPQCKTRYKR 70 (93)
T ss_dssp CSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTS--CSSCTTTCCCCCC
T ss_pred hhhcccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhcc--CccCcccCChhhh
Confidence 4456677999999975 22 333333 5899999999998766655 4689999998864
No 25
>d2g0ua1 a.2.20.1 (A:1-84) BsaL needle protein {Burkholderia pseudomallei [TaxId: 28450]}
Probab=69.73 E-value=8.2 Score=27.40 Aligned_cols=53 Identities=6% Similarity=0.134 Sum_probs=35.0
Q ss_pred HHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHhhhhhhhhH
Q 016792 10 FDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQDIAPLGQLE 71 (382)
Q Consensus 10 ~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 71 (382)
++.|...|... ++.+-++++.|++.|.. +| +....|+++|.++.++.....++
T Consensus 18 l~~v~~~f~~~-------~~~~~~~v~~Al~aL~~-~p-sdPa~LA~yQ~~lseysl~rNaq 70 (84)
T d2g0ua1 18 LTGIGRAFDDG-------VKDLNKQLQDAQANLTK-NP-SDPTALANYQMIMSEYNLYRNAQ 70 (84)
T ss_dssp HHHHHGGGCTT-------THHHHHHHHHHHHHHHH-ST-TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHHh-CC-CCHHHHHHHHHHHHHHHHHHHhh
Confidence 45555554442 33444677888888887 55 44578999999999876554443
No 26
>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.56 E-value=0.67 Score=25.11 Aligned_cols=15 Identities=27% Similarity=0.789 Sum_probs=11.6
Q ss_pred ccCCCCCcCCccccc
Q 016792 364 KCPYCPSDIDAAQCR 378 (382)
Q Consensus 364 kCP~c~~~~~~~~~~ 378 (382)
.||||.-.|...+.+
T Consensus 2 vcpycslrf~sp~lk 16 (26)
T d1wjpa2 2 VCPYCSLRFFSPELK 16 (26)
T ss_dssp CCTTTCCCBSSHHHH
T ss_pred CCCcceeeeCCHHHh
Confidence 599999888766554
No 27
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=65.70 E-value=0.75 Score=26.16 Aligned_cols=15 Identities=20% Similarity=0.722 Sum_probs=12.7
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|++|++.|..++
T Consensus 3 Py~C~~C~k~F~~~~ 17 (28)
T d1a1ia2 3 PFQCRICMRNFSRSD 17 (28)
T ss_dssp CEECTTTCCEESCHH
T ss_pred CccCCCCcCEecccc
Confidence 589999999998764
No 28
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.68 E-value=0.86 Score=27.43 Aligned_cols=17 Identities=12% Similarity=0.557 Sum_probs=13.8
Q ss_pred CccccCCCCCcCCcccc
Q 016792 361 RTFKCPYCPSDIDAAQC 377 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~~ 377 (382)
..|+|++|++.|..+.-
T Consensus 7 kP~~C~~C~k~F~~~~~ 23 (36)
T d2ct1a2 7 KPYECYICHARFTQSGT 23 (36)
T ss_dssp CSEECTTTCCEESCHHH
T ss_pred CCEeCCCCcccccchHH
Confidence 46999999999987643
No 29
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.42 E-value=36 Score=28.08 Aligned_cols=32 Identities=13% Similarity=0.255 Sum_probs=19.3
Q ss_pred hhhHhhHHHHHHHHHHHHHHHhhcCCCChHhh
Q 016792 68 GQLEGTQKELNIALSKYTKILEKSFNPDISKA 99 (382)
Q Consensus 68 ~~~~~~~k~~~~~~~k~~k~idk~f~~~l~~~ 99 (382)
.++.+.++++...+..+.+.....|..+++..
T Consensus 181 ~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~~~~ 212 (288)
T d2efla1 181 QMAEDSKADYSSILQKFNHEQHEYYHTHIPNI 212 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556666777777777666666555444443
No 30
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.49 E-value=1.4 Score=25.09 Aligned_cols=15 Identities=33% Similarity=0.919 Sum_probs=12.7
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.|.|++|++.|..++
T Consensus 2 py~C~~C~k~F~~~s 16 (29)
T d1sp1a_ 2 KFACPECPKRFMRSD 16 (29)
T ss_dssp CSCCTTTTCCCSCSH
T ss_pred CEECCcCCCeecchH
Confidence 589999999998764
No 31
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=61.24 E-value=14 Score=26.57 Aligned_cols=90 Identities=11% Similarity=0.008 Sum_probs=56.9
Q ss_pred HHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHHHH
Q 016792 114 IASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQFV 193 (382)
Q Consensus 114 I~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~fI 193 (382)
++..+.+.|.++-|..+.++.=... +.....+..+..+ ....|+++.|+.+.+.- +.-..... ..+..--+
T Consensus 22 ~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~a~~~lg~~--~~~~~~~~~A~~~~~~a---l~~~p~~~--~a~~~la~ 92 (112)
T d1hxia_ 22 EGLSMLKLANLAEAALAFEAVCQKE--PEREEAWRSLGLT--QAENEKDGLAIIALNHA---RMLDPKDI--AVHAALAV 92 (112)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHH---HHHCTTCH--HHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHhhhcccc--cccchhhhhhhhh--hhhhhhHHHhhcccccc---cccccccc--cchHHHHH
Confidence 4677899999999888877762222 3344445445444 36689999999998753 22222222 22233334
Q ss_pred HHHHcCCHHHHHHHHHHhc
Q 016792 194 EILRKGSREEALKYARANL 212 (382)
Q Consensus 194 eLl~~~~~~eAl~yar~~l 212 (382)
-....|+..+|+++.++.+
T Consensus 93 ~y~~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 93 SHTNEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHh
Confidence 4455688999999988754
No 32
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.39 E-value=1.3 Score=24.03 Aligned_cols=15 Identities=20% Similarity=0.410 Sum_probs=12.5
Q ss_pred cccCCCCCcCCcccc
Q 016792 363 FKCPYCPSDIDAAQC 377 (382)
Q Consensus 363 ~kCP~c~~~~~~~~~ 377 (382)
-||+.|++-|+..|-
T Consensus 2 hkc~~c~kcfsrkdk 16 (26)
T d2dmda2 2 HKCEVCGKCFSRKDK 16 (26)
T ss_dssp CCBTTTTBCCCCHHH
T ss_pred CccchhhhHhcchhH
Confidence 489999999988764
No 33
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.20 E-value=1.9 Score=29.17 Aligned_cols=39 Identities=26% Similarity=0.695 Sum_probs=23.7
Q ss_pred ceeccccccccCCCCCCeeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCcc
Q 016792 322 IFVCPVSKEQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 322 ~~~Cpi~~~~~~~~Npp~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~ 375 (382)
.|+||.|+..++. ==..+|..-..+.|.|-+|+.+...+
T Consensus 14 ~y~Cp~C~~~ys~---------------Lda~~L~d~~~~~F~C~~C~~el~eD 52 (62)
T d1vd4a_ 14 SFKCPVCSSTFTD---------------LEANQLFDPMTGTFRCTFCHTEVEED 52 (62)
T ss_dssp EEECSSSCCEEEH---------------HHHHHHEETTTTEEBCSSSCCBCEEC
T ss_pred ceECCCCCCCcch---------------hhHHHhcCcCCCeEEecCCCCEEecC
Confidence 5788876555443 33333332334589999999886543
No 34
>d2j9ub1 g.41.11.1 (B:115-161) Vacuolar protein-sorting-associated protein 36, VPS36 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=59.79 E-value=2.3 Score=26.79 Aligned_cols=31 Identities=23% Similarity=0.478 Sum_probs=20.3
Q ss_pred cceecccccc------ccCC--CCCCeeccCchhhhHHH
Q 016792 321 SIFVCPVSKE------QTSD--DNPPMIMSCGHVLCRQS 351 (382)
Q Consensus 321 S~~~Cpi~~~------~~~~--~Npp~~l~cGhv~~~~~ 351 (382)
|.++||||+- +++. .+.|..-.||-....+-
T Consensus 2 s~W~CPICm~~Ne~~~e~~~n~~~~p~C~nCGV~~D~em 40 (47)
T d2j9ub1 2 STWVCPICMVSNETQGEFTKDTLPTPICINCGVPADYEL 40 (47)
T ss_dssp EEEECTTTCCEEEESSCCCTTCSSCCBCTTTCCBCCHHH
T ss_pred cceecceeeeeccceeeeccCCCCCCcccccCCccCHHH
Confidence 5789999953 2222 35667788887766553
No 35
>d2j49a1 d.379.1.1 (A:149-282) TAF5 subunit of TFIID {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=59.21 E-value=2.8 Score=32.71 Aligned_cols=62 Identities=16% Similarity=0.248 Sum_probs=45.0
Q ss_pred HHHHHhcchHhhhcCCchhhhchHHHHHHHHHcCCHHHHHHHHHHhcCCchhhhHHHHHHHHH
Q 016792 166 LKWAAANSDKLTQNGSDLQLKLHSLQFVEILRKGSREEALKYARANLAPFASNHVNEIQKLMA 228 (382)
Q Consensus 166 l~W~~~n~~~L~~~~s~LeF~L~~q~fIeLl~~~~~~eAl~yar~~l~~f~~~~~~eiq~lm~ 228 (382)
-.|+..+-+.-+..=+.+-|=+...-|++|+.+| ..+|.+|..++-+-|...|.++|+++.+
T Consensus 12 r~wv~~sld~yK~EL~~lLyPvFvh~yL~Lv~~~-~~~A~~F~~~f~~~~~~~~~~~i~~L~~ 73 (134)
T d2j49a1 12 KNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKN-PVYARRFFDRFSPDFKDFHGSEINRLFS 73 (134)
T ss_dssp HHHHHTSCTTTHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHGGGGHHHHHHHHHTTTT
T ss_pred HHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHhhHHHHHHHHHHHHHHHc
Confidence 4677665433332225688888889999999986 5688888887777777778888888755
No 36
>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=58.35 E-value=4.5 Score=26.26 Aligned_cols=22 Identities=14% Similarity=0.166 Sum_probs=18.0
Q ss_pred HHHHHHHH--cCChHHHHHHHHhc
Q 016792 151 YQILEAMK--SGNLEPALKWAAAN 172 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n 172 (382)
....++|. +||++.|++|+++.
T Consensus 18 ~dcKkAL~e~~gD~ekA~e~Lr~~ 41 (52)
T d1aipc1 18 MDVKRALEDAGWDEEKAVQLLRER 41 (52)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHH
Confidence 45677776 69999999999875
No 37
>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=57.04 E-value=4.5 Score=26.66 Aligned_cols=22 Identities=23% Similarity=0.468 Sum_probs=18.1
Q ss_pred HHHHHHHH--cCChHHHHHHHHhc
Q 016792 151 YQILEAMK--SGNLEPALKWAAAN 172 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n 172 (382)
....++|. +||++.|++|+++.
T Consensus 20 ~dcKkAL~e~~gD~ekA~e~Lrkk 43 (56)
T d1xb2b1 20 INCKKALETCGGDLKQAESWLHKQ 43 (56)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHH
Confidence 45677776 69999999999875
No 38
>d2jnya1 b.171.1.1 (A:1-59) Uncharacterized protein Cgl1405/cg1592 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=56.25 E-value=1.5 Score=29.45 Aligned_cols=15 Identities=27% Similarity=0.600 Sum_probs=11.6
Q ss_pred ccccceecccccccc
Q 016792 318 QFHSIFVCPVSKEQT 332 (382)
Q Consensus 318 ~~hS~~~Cpi~~~~~ 332 (382)
..=.+++||+|+...
T Consensus 6 ~LL~iL~CP~ck~~L 20 (59)
T d2jnya1 6 QLLEVLACPKDKGPL 20 (59)
T ss_dssp GGTCCCBCTTTCCBC
T ss_pred HHHHHhcCCCCCCEe
Confidence 345689999999865
No 39
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.82 E-value=1.3 Score=25.22 Aligned_cols=15 Identities=20% Similarity=0.716 Sum_probs=11.6
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.|.||.|...|...|
T Consensus 3 p~~cpic~qrfkrkd 17 (32)
T d2epqa1 3 PYSCPVCGLRFKRKD 17 (32)
T ss_dssp SSEETTTTEECSCHH
T ss_pred CcccchHHHHhhccc
Confidence 478999988887654
No 40
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.24 E-value=2 Score=25.93 Aligned_cols=16 Identities=25% Similarity=0.696 Sum_probs=13.4
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 11 kpy~C~~CgK~F~~~s 26 (38)
T d2cota2 11 RRYKCDECGKSFSHSS 26 (38)
T ss_dssp CSSBCSSSCCBCSCHH
T ss_pred CCEecCCCCceeeCHH
Confidence 4799999999998654
No 41
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}
Probab=55.22 E-value=2.3 Score=25.53 Aligned_cols=16 Identities=25% Similarity=0.866 Sum_probs=13.4
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
+.|+|+.|++.|...+
T Consensus 10 KPy~C~~C~k~F~~~~ 25 (37)
T d1p7aa_ 10 KPFQCPDCDRSFSRSD 25 (37)
T ss_dssp SSBCCTTTCCCBSSHH
T ss_pred cCeEeCCCCCEecCHH
Confidence 4799999999998654
No 42
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=54.88 E-value=1.9 Score=25.67 Aligned_cols=16 Identities=31% Similarity=0.669 Sum_probs=13.1
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
+.|+|++|++.|....
T Consensus 6 kPy~C~~C~k~F~~~~ 21 (35)
T d1srka_ 6 RPFVCRICLSAFTTKA 21 (35)
T ss_dssp SCEECSSSCCEESSHH
T ss_pred ccccCCCCCCcccChH
Confidence 4699999999987653
No 43
>d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=52.94 E-value=6.1 Score=25.77 Aligned_cols=22 Identities=18% Similarity=0.302 Sum_probs=18.1
Q ss_pred HHHHHHHH--cCChHHHHHHHHhc
Q 016792 151 YQILEAMK--SGNLEPALKWAAAN 172 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n 172 (382)
....++|. +||++.|++|+++.
T Consensus 20 ~dCKkAL~e~~gD~ekA~e~Lr~k 43 (54)
T d1efub3 20 MDCKKALTEANGDIELAIENMRKS 43 (54)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHH
Confidence 45677777 69999999999875
No 44
>d2ca5a1 a.2.20.1 (A:20-78) MxiH needle protein {Shigella flexneri [TaxId: 623]}
Probab=51.74 E-value=27 Score=22.67 Aligned_cols=37 Identities=16% Similarity=0.274 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHhhhh
Q 016792 28 IDLIVQEIEKALETVKSASHLDDKYVLTELKRRLQDIAP 66 (382)
Q Consensus 28 id~~~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 66 (382)
++.+-+.|+.|.+.|.. +|.|| ..|++-+.++.+...
T Consensus 4 v~~l~~~l~~Al~~L~~-~pSdp-~~LA~YQ~klsEYnl 40 (59)
T d2ca5a1 4 TQTLQGELTLALDKLAK-NPSNP-QLLAEYQSKLSEYTL 40 (59)
T ss_dssp HHHHHHHHHHHHHHHHH-CTTCH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc-CCCCH-HHHHHHHHHHHHHHH
Confidence 35566789999999988 66555 677888888876543
No 45
>d2hf1a1 b.171.1.1 (A:2-60) Hypothetical protein CV3345 {Chromobacterium violaceum [TaxId: 536]}
Probab=51.41 E-value=1.8 Score=29.06 Aligned_cols=14 Identities=36% Similarity=0.681 Sum_probs=10.6
Q ss_pred ccceeccccccccC
Q 016792 320 HSIFVCPVSKEQTS 333 (382)
Q Consensus 320 hS~~~Cpi~~~~~~ 333 (382)
=.+++||+|+....
T Consensus 5 L~iL~CP~ck~~L~ 18 (59)
T d2hf1a1 5 LEILVCPLCKGPLV 18 (59)
T ss_dssp EEECBCTTTCCBCE
T ss_pred hhhhcCCCCCCeee
Confidence 35889999988553
No 46
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.00 E-value=41 Score=24.27 Aligned_cols=97 Identities=8% Similarity=0.126 Sum_probs=57.0
Q ss_pred HHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhh---ch
Q 016792 112 QIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLK---LH 188 (382)
Q Consensus 112 rlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~---L~ 188 (382)
+-+++.+++.|.|+-|...-.++=... +.....+..+.. -..+.|+++.|+.++..-= .+........+. .+
T Consensus 8 k~~G~~~~~~~~y~~Ai~~y~~al~~~--p~~~~~~~~~a~--~~~~~~~~~~A~~~~~~al-~l~~~~~~~~~~~a~~~ 82 (128)
T d1elra_ 8 KELGNDAYKKKDFDTALKHYDKAKELD--PTNMTYITNQAA--VYFEKGDYNKCRELCEKAI-EVGRENREDYRQIAKAY 82 (128)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHH--HHHHHTCHHHHHHHHHHHH-HHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC--cccHHHHHhHHH--HHHHcCchHHHHHHHHHHH-HhCcccHHHHHHHHHHH
Confidence 357888999999988877665542111 233333333322 2334699999999998752 233333333332 22
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHhcC
Q 016792 189 SLQFVEILRKGSREEALKYARANLA 213 (382)
Q Consensus 189 ~q~fIeLl~~~~~~eAl~yar~~l~ 213 (382)
...-......++..+|+.+.++.+.
T Consensus 83 ~~lg~~~~~~~~~~~A~~~~~kal~ 107 (128)
T d1elra_ 83 ARIGNSYFKEEKYKDAIHFYNKSLA 107 (128)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 2223334456789999999887654
No 47
>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=49.57 E-value=2.2 Score=25.83 Aligned_cols=19 Identities=26% Similarity=0.420 Sum_probs=14.1
Q ss_pred cceeccccccccCCC-CCCe
Q 016792 321 SIFVCPVSKEQTSDD-NPPM 339 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~-Npp~ 339 (382)
|.++||-||..+... |||-
T Consensus 1 sR~vc~~cG~~Yh~~~~pPk 20 (37)
T d2ak3a2 1 ARWIHPGSGRVYNIEFNPPK 20 (37)
T ss_dssp CEEEETTTTEEEETTTBCCS
T ss_pred CceeeCCcCChhhhccCCcc
Confidence 578899998887654 6664
No 48
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=48.84 E-value=0.69 Score=41.35 Aligned_cols=12 Identities=25% Similarity=0.592 Sum_probs=9.5
Q ss_pred CccccCCCCCcC
Q 016792 361 RTFKCPYCPSDI 372 (382)
Q Consensus 361 ~~~kCP~c~~~~ 372 (382)
.+.+||+|+.+-
T Consensus 203 ~R~~C~~Cg~~~ 214 (290)
T d2fiya1 203 VRIKCSHCEESK 214 (290)
T ss_dssp CTTSCSSSCCCS
T ss_pred ccccCCCCCCCC
Confidence 378999998764
No 49
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.37 E-value=4.1 Score=22.91 Aligned_cols=17 Identities=18% Similarity=0.716 Sum_probs=13.6
Q ss_pred ccccCC--CCCcCCccccc
Q 016792 362 TFKCPY--CPSDIDAAQCR 378 (382)
Q Consensus 362 ~~kCP~--c~~~~~~~~~~ 378 (382)
.|+||+ |++.|..++-.
T Consensus 2 Pf~C~~~gC~K~F~~~~~L 20 (28)
T d1ubdc4 2 PYVCPFDGCNKKFAQSTNL 20 (28)
T ss_dssp CCCCCSTTCCCCCSSTTTT
T ss_pred CcCCCCCCcCCcCCCHHHH
Confidence 589998 99999877643
No 50
>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=47.93 E-value=0.61 Score=30.79 Aligned_cols=10 Identities=30% Similarity=1.019 Sum_probs=8.2
Q ss_pred ccccCCCCCc
Q 016792 362 TFKCPYCPSD 371 (382)
Q Consensus 362 ~~kCP~c~~~ 371 (382)
...||.|+..
T Consensus 35 dw~CP~C~a~ 44 (53)
T d1brfa_ 35 DWVCPICGAP 44 (53)
T ss_dssp TCBCTTTCCB
T ss_pred CCCCcCCCCc
Confidence 5899999864
No 51
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=47.73 E-value=2 Score=25.91 Aligned_cols=17 Identities=29% Similarity=0.964 Sum_probs=13.5
Q ss_pred CccccCCCCCcCCcccc
Q 016792 361 RTFKCPYCPSDIDAAQC 377 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~~ 377 (382)
+.++|++|++.|.-.++
T Consensus 4 r~~~C~~C~k~F~s~qA 20 (37)
T d1njqa_ 4 RSYTCSFCKREFRSAQA 20 (37)
T ss_dssp SSEECTTTCCEESSHHH
T ss_pred CccCCCCCCCccCCccc
Confidence 46899999999876544
No 52
>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}
Probab=47.31 E-value=0.81 Score=29.09 Aligned_cols=10 Identities=30% Similarity=0.939 Sum_probs=8.1
Q ss_pred ccccCCCCCc
Q 016792 362 TFKCPYCPSD 371 (382)
Q Consensus 362 ~~kCP~c~~~ 371 (382)
.++||.|+..
T Consensus 29 dw~CP~C~a~ 38 (45)
T d6rxna_ 29 DWCCPVCGVS 38 (45)
T ss_dssp TCBCTTTCCB
T ss_pred CCCCcCCCCc
Confidence 5799999864
No 53
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.24 E-value=32 Score=23.67 Aligned_cols=57 Identities=14% Similarity=0.205 Sum_probs=33.6
Q ss_pred HHHHcCChHHHHHHHHhcchHhhhcCCchhh---hchHHHHHHHHHcCCHHHHHHHHHHhc
Q 016792 155 EAMKSGNLEPALKWAAANSDKLTQNGSDLQL---KLHSLQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 155 ~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF---~L~~q~fIeLl~~~~~~eAl~yar~~l 212 (382)
.....||...|+.|.++--..... +..-.+ ..+..--.-..+.|+..+|+.|.++-+
T Consensus 14 ~~~~~g~y~~A~~~~~~Al~~~~~-~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL 73 (95)
T d1tjca_ 14 VAYTEADYYHTELWMEQALRQLDE-GEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLL 73 (95)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHT-TCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHhh-hhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHH
Confidence 346789999999999875322222 111111 111111222446789999999988754
No 54
>d1x4pa1 a.217.1.1 (A:8-60) Arginine/serine-rich-splicing factor 14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.56 E-value=19 Score=22.58 Aligned_cols=46 Identities=17% Similarity=0.322 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCChHHHHHHHHhcchH--hhhcCCchhhhchHHHHHHH
Q 016792 150 MYQILEAMKSGNLEPALKWAAANSDK--LTQNGSDLQLKLHSLQFVEI 195 (382)
Q Consensus 150 ~~~I~~~L~~gdl~~Al~W~~~n~~~--L~~~~s~LeF~L~~q~fIeL 195 (382)
+.+.+..|-.|.+.|--.-+..+.|. .....++|||+-++++.-|+
T Consensus 4 IeqlV~~ii~G~LspkeR~~~k~~P~yWFLsde~SlEyKYYkLkLae~ 51 (53)
T d1x4pa1 4 IDQLVKRVIEGSLSPKERTLLKEDPAYWFLSDENSLEYKYYKLKLAEM 51 (53)
T ss_dssp HHHHHHHHHHTCSCHHHHHHHHHSGGGCTTTCCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHhhcCCCeEEeecccchhHHHHHhhHHHh
Confidence 34667788899999988888877775 44667899999999998776
No 55
>d1vq0a2 g.81.1.1 (A:231-287) HSP33, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=45.38 E-value=3.8 Score=26.99 Aligned_cols=29 Identities=17% Similarity=0.410 Sum_probs=22.2
Q ss_pred hhHHHHHHHHhcCCCccccCCCCCcCCcc
Q 016792 347 LCRQSINKMSKNHSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 347 ~~~~~l~~l~~~~~~~~kCP~c~~~~~~~ 375 (382)
++.+-++.|...+.-.+.|.||++.+.++
T Consensus 15 l~~~el~~m~~eg~iev~C~FC~~~Y~f~ 43 (57)
T d1vq0a2 15 LDKKELEDMRKEGKGEVVCKWCNTRYVFS 43 (57)
T ss_dssp SCHHHHHHHHHHTCEEEECTTTCCEEEEC
T ss_pred CCHHHHHHHHHcCCeEEEeECCCCEEEEC
Confidence 55677778876654479999999998765
No 56
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}
Probab=44.25 E-value=2.5 Score=22.68 Aligned_cols=14 Identities=21% Similarity=0.954 Sum_probs=11.1
Q ss_pred cccCCCCCcCCccc
Q 016792 363 FKCPYCPSDIDAAQ 376 (382)
Q Consensus 363 ~kCP~c~~~~~~~~ 376 (382)
+.||+|=++|+..+
T Consensus 2 ypcp~cfkeftrkd 15 (26)
T d2drpa2 2 YPCPFCFKEFTRKD 15 (26)
T ss_dssp EECTTTCCEESCHH
T ss_pred cCCchhhHHhcccc
Confidence 46999998888765
No 57
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.79 E-value=4.1 Score=23.27 Aligned_cols=16 Identities=19% Similarity=0.605 Sum_probs=12.9
Q ss_pred ccccCC--CCCcCCcccc
Q 016792 362 TFKCPY--CPSDIDAAQC 377 (382)
Q Consensus 362 ~~kCP~--c~~~~~~~~~ 377 (382)
.++|++ |++.|..++-
T Consensus 2 p~~C~~~gCgk~F~~~~~ 19 (30)
T d2glia3 2 PHKCTFEGCRKSYSRLEN 19 (30)
T ss_dssp CCCCCSTTCCCCCSSHHH
T ss_pred CeeCCCCCCCceECChhH
Confidence 589999 9999987643
No 58
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=43.39 E-value=4.9 Score=24.15 Aligned_cols=15 Identities=20% Similarity=0.820 Sum_probs=9.7
Q ss_pred cceeccccccccCCC
Q 016792 321 SIFVCPVSKEQTSDD 335 (382)
Q Consensus 321 S~~~Cpi~~~~~~~~ 335 (382)
.+++|+|||-...++
T Consensus 4 ~~~~C~vCG~i~~g~ 18 (37)
T d1nnqa2 4 KVYICPICGYTAVDE 18 (37)
T ss_dssp CEEECTTTCCEEESC
T ss_pred cEEECCCCCCEecCC
Confidence 367787777665543
No 59
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.85 E-value=3.7 Score=22.74 Aligned_cols=15 Identities=20% Similarity=0.574 Sum_probs=12.1
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
.++|+.|++.|..+.
T Consensus 2 Py~C~eCgK~F~~~s 16 (26)
T d1x6ea2 2 PYKCLECGKAFSQNS 16 (26)
T ss_dssp CEECSSSCCEESSHH
T ss_pred CccCCCCcCeeccCc
Confidence 479999999987653
No 60
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.53 E-value=4.5 Score=23.59 Aligned_cols=16 Identities=13% Similarity=0.536 Sum_probs=13.0
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
+.++|++|++.|....
T Consensus 6 kpy~C~~Cgk~F~~~~ 21 (33)
T d1x6ea1 6 KPYGCVECGKAFSRSS 21 (33)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCeeCCCCCCEeCchH
Confidence 4799999999987643
No 61
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.17 E-value=5.9 Score=22.89 Aligned_cols=16 Identities=13% Similarity=0.411 Sum_probs=13.2
Q ss_pred ccccCC--CCCcCCcccc
Q 016792 362 TFKCPY--CPSDIDAAQC 377 (382)
Q Consensus 362 ~~kCP~--c~~~~~~~~~ 377 (382)
.|+|++ |++.|+.++-
T Consensus 3 P~~C~~pgC~k~F~r~~~ 20 (32)
T d1zfda_ 3 PYSCDHPGCDKAFVRNHD 20 (32)
T ss_dssp SBCCCCTTCCCCBSSSHH
T ss_pred CeECcCCCCCCeeCCHHH
Confidence 689988 9999987653
No 62
>d2pk7a1 b.171.1.1 (A:3-61) Uncharacterized protein PFL1779 {Pseudomonas fluorescens [TaxId: 294]}
Probab=39.91 E-value=4.1 Score=27.14 Aligned_cols=12 Identities=33% Similarity=0.827 Sum_probs=9.6
Q ss_pred cceecccccccc
Q 016792 321 SIFVCPVSKEQT 332 (382)
Q Consensus 321 S~~~Cpi~~~~~ 332 (382)
.+++||+|+...
T Consensus 5 ~iL~CP~ck~~L 16 (59)
T d2pk7a1 5 DILACPICKGPL 16 (59)
T ss_dssp GTCCCTTTCCCC
T ss_pred hheECCCCCCcc
Confidence 478999998754
No 63
>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}
Probab=39.63 E-value=1 Score=29.66 Aligned_cols=10 Identities=30% Similarity=0.999 Sum_probs=8.3
Q ss_pred ccccCCCCCc
Q 016792 362 TFKCPYCPSD 371 (382)
Q Consensus 362 ~~kCP~c~~~ 371 (382)
.+.||.|+..
T Consensus 36 dw~CP~C~a~ 45 (53)
T d1iroa_ 36 DWVCPLCGVG 45 (53)
T ss_dssp TCBCTTTCCB
T ss_pred CCCCcCCCCc
Confidence 5899999864
No 64
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.89 E-value=5.4 Score=22.86 Aligned_cols=16 Identities=25% Similarity=0.712 Sum_probs=12.1
Q ss_pred ccccC--CCCCcCCcccc
Q 016792 362 TFKCP--YCPSDIDAAQC 377 (382)
Q Consensus 362 ~~kCP--~c~~~~~~~~~ 377 (382)
.|+|| .|++.|..++-
T Consensus 2 pf~C~~~~C~k~F~~~~~ 19 (31)
T d1sp2a_ 2 PFMCTWSYCGKRFTRSDE 19 (31)
T ss_dssp CCBCCSTTCCCBCSSHHH
T ss_pred cCCCcCCCCCcCcCChhH
Confidence 58996 59999987653
No 65
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.52 E-value=4.4 Score=23.99 Aligned_cols=16 Identities=19% Similarity=0.644 Sum_probs=13.1
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
..++|++|++.|....
T Consensus 7 kPy~C~~C~k~F~~~~ 22 (36)
T d1x6ha2 7 KPYACSHCDKTFRQKQ 22 (36)
T ss_dssp CCEECSSSSCEESSHH
T ss_pred CCEECCCCCCCcCCHh
Confidence 4699999999987654
No 66
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.83 E-value=8.7 Score=24.23 Aligned_cols=35 Identities=17% Similarity=0.409 Sum_probs=22.9
Q ss_pred cCchhhhHHHHHHH-Hh--cCCCccccCCCCCcCCccc
Q 016792 342 SCGHVLCRQSINKM-SK--NHSRTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 342 ~cGhv~~~~~l~~l-~~--~~~~~~kCP~c~~~~~~~~ 376 (382)
.||-.+....-... .+ .+...++|++|++.|....
T Consensus 7 ~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~ 44 (53)
T d2csha1 7 QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKH 44 (53)
T ss_dssp TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSH
T ss_pred CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHH
Confidence 57777765544433 22 2335699999999987654
No 67
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}
Probab=34.47 E-value=4.3 Score=34.85 Aligned_cols=24 Identities=25% Similarity=0.516 Sum_probs=13.3
Q ss_pred eeccccccccCCCCCCeeccCchh
Q 016792 323 FVCPVSKEQTSDDNPPMIMSCGHV 346 (382)
Q Consensus 323 ~~Cpi~~~~~~~~Npp~~l~cGhv 346 (382)
|.||+|+..++.+..-+.=++||.
T Consensus 2 f~CP~C~~~L~~~~~~l~C~~~h~ 25 (268)
T d1p91a_ 2 FSCPLCHQPLSREKNSYICPQRHQ 25 (268)
T ss_dssp BBCTTTCCBCEEETTEEECTTCCE
T ss_pred ccCCCCChhhhcCCCeEECCCCCc
Confidence 788888876654332232233554
No 68
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.27 E-value=6.5 Score=21.40 Aligned_cols=13 Identities=31% Similarity=0.662 Sum_probs=9.9
Q ss_pred cccCCCCCcCCcc
Q 016792 363 FKCPYCPSDIDAA 375 (382)
Q Consensus 363 ~kCP~c~~~~~~~ 375 (382)
|+||.|++.+-..
T Consensus 2 f~c~kcgkcyfrk 14 (28)
T d2dlqa2 2 FECPKCGKCYFRK 14 (28)
T ss_dssp CBCTTTCCBCSSH
T ss_pred CccccchhhhhhH
Confidence 7899999876543
No 69
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.07 E-value=5 Score=22.83 Aligned_cols=16 Identities=19% Similarity=0.638 Sum_probs=12.5
Q ss_pred ccccCC--CCCcCCcccc
Q 016792 362 TFKCPY--CPSDIDAAQC 377 (382)
Q Consensus 362 ~~kCP~--c~~~~~~~~~ 377 (382)
.|+||+ |++.|..++-
T Consensus 2 p~~C~~~gCgk~F~~~~~ 19 (30)
T d1ubdc3 2 PFQCTFEGCGKRFSLDFN 19 (30)
T ss_dssp CEECCSTTCCCEESCHHH
T ss_pred CccCCCCCCCceECcHHH
Confidence 589988 9999886643
No 70
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.84 E-value=5.1 Score=22.65 Aligned_cols=17 Identities=18% Similarity=0.579 Sum_probs=13.1
Q ss_pred ccccCC--CCCcCCccccc
Q 016792 362 TFKCPY--CPSDIDAAQCR 378 (382)
Q Consensus 362 ~~kCP~--c~~~~~~~~~~ 378 (382)
.|+|++ |++.|..++-.
T Consensus 2 p~~C~~~gC~k~F~~~~~L 20 (29)
T d1a1ia1 2 PYACPVESCDRRFSRSADL 20 (29)
T ss_dssp CEECCSTTCCCEESSHHHH
T ss_pred CeECCCCCCCcEECchhHh
Confidence 589988 99998876543
No 71
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.47 E-value=92 Score=23.20 Aligned_cols=89 Identities=12% Similarity=0.060 Sum_probs=47.7
Q ss_pred HHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHHHH
Q 016792 114 IASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQFV 193 (382)
Q Consensus 114 I~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~fI 193 (382)
.++-++..|.|+.|.....++=... +.....+..+..+ .++.|+++.|+.+++.- + +.+++. ..-+...-.
T Consensus 10 ~Gn~~~~~g~~~~Ai~~~~kal~~~--p~~~~~~~~lg~~--y~~~~~~~~Ai~~~~~a---l-~l~p~~-~~a~~~lg~ 80 (201)
T d2c2la1 10 QGNRLFVGRKYPEAAACYGRAITRN--PLVAVYYTNRALC--YLKMQQPEQALADCRRA---L-ELDGQS-VKAHFFLGQ 80 (201)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC--SCCHHHHHHHHHH--HHHTTCHHHHHHHHHHH---T-TSCTTC-HHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHhHHHH--HhhhhhhhhhhHHHHHH---H-HhCCCc-HHHHHHHHH
Confidence 3677788888887777766542111 2223333333333 35578888888888763 1 122211 111222222
Q ss_pred HHHHcCCHHHHHHHHHHh
Q 016792 194 EILRKGSREEALKYARAN 211 (382)
Q Consensus 194 eLl~~~~~~eAl~yar~~ 211 (382)
-+.+.|+..+|+.+.++-
T Consensus 81 ~~~~l~~~~~A~~~~~~a 98 (201)
T d2c2la1 81 CQLEMESYDEAIANLQRA 98 (201)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHH
Confidence 334567788888777753
No 72
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.59 E-value=7.3 Score=24.47 Aligned_cols=19 Identities=21% Similarity=0.602 Sum_probs=15.0
Q ss_pred CCccccCC--CCCcCCccccc
Q 016792 360 SRTFKCPY--CPSDIDAAQCR 378 (382)
Q Consensus 360 ~~~~kCP~--c~~~~~~~~~~ 378 (382)
.+.++|++ |++.|...+-.
T Consensus 16 ekpy~C~~~~C~k~F~~~~~L 36 (47)
T d1ncsa_ 16 DKTFECLFPGCTKTFKRRYNI 36 (47)
T ss_dssp TTEEECCCTTCCCEECSSSSH
T ss_pred CCCeECCcCCCCccccCchHH
Confidence 35799988 99999877643
No 73
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.15 E-value=9.7 Score=21.03 Aligned_cols=14 Identities=14% Similarity=0.451 Sum_probs=10.3
Q ss_pred cccCCCCCcCCccc
Q 016792 363 FKCPYCPSDIDAAQ 376 (382)
Q Consensus 363 ~kCP~c~~~~~~~~ 376 (382)
+.||||+..+.-..
T Consensus 2 YvC~~Cg~~C~KPS 15 (28)
T d1bboa1 2 YICEECGIRAKKPS 15 (28)
T ss_dssp CBCTTTCCBCSSHH
T ss_pred ccccccCcccCCHH
Confidence 57999998765443
No 74
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.98 E-value=1.1e+02 Score=24.73 Aligned_cols=54 Identities=15% Similarity=0.220 Sum_probs=25.1
Q ss_pred HHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHh
Q 016792 114 IASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAA 171 (382)
Q Consensus 114 I~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~ 171 (382)
++...++.|.++.|....++.--.. +...+.+..+..+ ....|+++.|+++++.
T Consensus 5 la~~~~~~G~~~~A~~~~~~~l~~~--p~~~~~~~~la~~--~~~~~~~~~A~~~~~~ 58 (388)
T d1w3ba_ 5 LAHREYQAGDFEAAERHCMQLWRQE--PDNTGVLLLLSSI--HFQCRRLDRSAHFSTL 58 (388)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHH--HHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHH--HHHcCCHHHHHHHHHH
Confidence 3455566666666666555431111 1122222222222 2235666666666654
No 75
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=30.48 E-value=87 Score=22.28 Aligned_cols=65 Identities=17% Similarity=0.290 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC--------------ChHHHHHHHHHHHHhh-hhhhhhHhhHHHHHHHHHHHHHHHhhc
Q 016792 27 VIDLIVQEIEKALETVKSASHL--------------DDKYVLTELKRRLQDI-APLGQLEGTQKELNIALSKYTKILEKS 91 (382)
Q Consensus 27 ~id~~~~~l~~~~~~~~~~~~~--------------~~~~~l~~l~~~~~~~-~~~~~~~~~~k~~~~~~~k~~k~idk~ 91 (382)
.++.-+++.+.+.++|...++. +...++..|...+..+ ..++++++..+.....+.++.+.|.+.
T Consensus 26 ~le~q~~E~~~vl~eL~~l~~d~~vyk~vG~vLv~~~~~e~~~~l~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~~~ 105 (107)
T d1fxka_ 26 TVEMQINETQKALEELSRAADDAEVYKSSGNILIRVAKDELTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQEA 105 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCcccHHHHHhcchhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555556666553321 2367778888877665 456677777777777777777776643
No 76
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=30.34 E-value=1.2e+02 Score=23.96 Aligned_cols=104 Identities=11% Similarity=-0.015 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchHhhhcC-Cchhhhc
Q 016792 109 TVSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAAANSDKLTQNG-SDLQLKL 187 (382)
Q Consensus 109 ~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~~n~~~L~~~~-s~LeF~L 187 (382)
.+....+.++...|.++.|....++.--................-.-.+..|+.+.|+.+++.-.......+ ....-..
T Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 293 (366)
T d1hz4a_ 214 NANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRN 293 (366)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHHH
Confidence 345567788888899988888777653221011111111112222334567999999999886543333222 1222233
Q ss_pred hHHHHHHHHHcCCHHHHHHHHHHhc
Q 016792 188 HSLQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 188 ~~q~fIeLl~~~~~~eAl~yar~~l 212 (382)
+...-.-..+.|+..+|+++.++-+
T Consensus 294 ~~~la~~~~~~g~~~~A~~~l~~Al 318 (366)
T d1hz4a_ 294 LLLLNQLYWQAGRKSDAQRVLLDAL 318 (366)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3333344556789999988887643
No 77
>d1vzya2 g.81.1.1 (A:234-290) HSP33, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=30.34 E-value=6.4 Score=25.72 Aligned_cols=29 Identities=17% Similarity=0.354 Sum_probs=21.0
Q ss_pred hhHHHHHHHHhc-CCCccccCCCCCcCCcc
Q 016792 347 LCRQSINKMSKN-HSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 347 ~~~~~l~~l~~~-~~~~~kCP~c~~~~~~~ 375 (382)
++.+-+..|... +.-.+.|.+|++.+.++
T Consensus 16 l~~~el~~~~~e~g~iev~C~fC~~~Y~f~ 45 (57)
T d1vzya2 16 LGKKEIQDMIEEDGQAEAVCHFCNEKYLFT 45 (57)
T ss_dssp TCHHHHHHHHHHHSEEEEECTTTCCEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEEeeCCCCEEEEC
Confidence 566777777554 33369999999988764
No 78
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.83 E-value=24 Score=21.28 Aligned_cols=19 Identities=16% Similarity=0.342 Sum_probs=15.0
Q ss_pred HHHHHHHH--cCChHHHHHHH
Q 016792 151 YQILEAMK--SGNLEPALKWA 169 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~ 169 (382)
.+.+.+|+ ++|++.|++|+
T Consensus 19 ~~a~~AL~~~~~N~e~A~~~L 39 (41)
T d1oqya1 19 ERVVAALRASYNNPHRAVEYL 39 (41)
T ss_dssp HHHHHHHHHSCSSTTHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHH
Confidence 35577787 68999999995
No 79
>d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.73 E-value=21 Score=22.63 Aligned_cols=21 Identities=14% Similarity=0.373 Sum_probs=15.0
Q ss_pred HHHHHHH---cCChHHHHHHHHhc
Q 016792 152 QILEAMK---SGNLEPALKWAAAN 172 (382)
Q Consensus 152 ~I~~~L~---~gdl~~Al~W~~~n 172 (382)
+.+.+|. +++++.|++|+=+|
T Consensus 28 ~a~~AL~~t~n~~ve~A~~WLl~H 51 (51)
T d2cpwa1 28 RAQKALASTGGRSVQTACDWLFSH 51 (51)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCCHHHHHHHHHcC
Confidence 4456665 34799999998654
No 80
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.21 E-value=4 Score=29.00 Aligned_cols=48 Identities=15% Similarity=0.413 Sum_probs=29.8
Q ss_pred eeccccccccCCCCCCeec--cCchhhhHHHHH-----HHHhcCCCccccCCCCC
Q 016792 323 FVCPVSKEQTSDDNPPMIM--SCGHVLCRQSIN-----KMSKNHSRTFKCPYCPS 370 (382)
Q Consensus 323 ~~Cpi~~~~~~~~Npp~~l--~cGhv~~~~~l~-----~l~~~~~~~~kCP~c~~ 370 (382)
++|.||+....+++..|+. .|+..|-..|+. .+.+.....+.||.|-.
T Consensus 17 ~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~ 71 (88)
T d1weva_ 17 LACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTR 71 (88)
T ss_dssp CSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHH
T ss_pred CCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCc
Confidence 4799998765554445553 677777777754 23333333578998854
No 81
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=29.05 E-value=12 Score=22.17 Aligned_cols=9 Identities=44% Similarity=0.907 Sum_probs=6.1
Q ss_pred cccCCCCCc
Q 016792 363 FKCPYCPSD 371 (382)
Q Consensus 363 ~kCP~c~~~ 371 (382)
-+||.|+..
T Consensus 21 e~CPvCg~~ 29 (36)
T d1yuza2 21 EKCPICFRP 29 (36)
T ss_dssp SBCTTTCCB
T ss_pred CcCCCCCCc
Confidence 468888654
No 82
>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.81 E-value=22 Score=23.46 Aligned_cols=23 Identities=26% Similarity=0.276 Sum_probs=17.4
Q ss_pred HHHHHHH--cCChHHHHHHHHhcch
Q 016792 152 QILEAMK--SGNLEPALKWAAANSD 174 (382)
Q Consensus 152 ~I~~~L~--~gdl~~Al~W~~~n~~ 174 (382)
+.+.+|+ ++|++.|++|+-+|..
T Consensus 25 ~a~~AL~~~~~~~e~A~~wL~~~~~ 49 (63)
T d1wjia_ 25 ASRQALMDNGNNLEAALNVLLTSNK 49 (63)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHSS
T ss_pred HHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 4455565 5799999999998854
No 83
>d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.60 E-value=30 Score=21.83 Aligned_cols=21 Identities=29% Similarity=0.469 Sum_probs=16.0
Q ss_pred HHHHHH---cCChHHHHHHHHhcc
Q 016792 153 ILEAMK---SGNLEPALKWAAANS 173 (382)
Q Consensus 153 I~~~L~---~gdl~~Al~W~~~n~ 173 (382)
.+.+|. +++++.|++|+-+|.
T Consensus 19 a~~Al~~t~n~~ve~A~~Wl~~h~ 42 (51)
T d2crna1 19 ALKALAATGRKTAEEALAWLHDHC 42 (51)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHS
T ss_pred HHHHHHHHCCCCHHHHHHHHHHcC
Confidence 344553 568999999999885
No 84
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.25 E-value=1.1e+02 Score=22.25 Aligned_cols=111 Identities=14% Similarity=0.146 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCChHhhhccccCCHHHHHHHHHHHHHHhCcHHHHHHHHHHh-CCCcchhhhHHHHHHHHH
Q 016792 74 QKELNIALSKYTKILEKSFNPDISKAYRNIEFDTHTVSQIIASHFYRQGLFEVGDCFISET-KESECSAAILSIFEDMYQ 152 (382)
Q Consensus 74 ~k~~~~~~~k~~k~idk~f~~~l~~~~~~~~~~~~~lnrlI~~hLlR~G~~e~a~~f~~Es-~~~~~~~~~~~~f~~~~~ 152 (382)
.+++..++.-|.++|.- .++.. ..-..++.-++..|.++.|....+.+ .+. +.....+..+
T Consensus 23 ~~~y~~A~~~~~~al~~--~p~~~-----------~~~~~lg~~~~~~~~~~~A~~~~~kal~~~---p~~~~a~~~~-- 84 (159)
T d1a17a_ 23 AKDYENAIKFYSQAIEL--NPSNA-----------IYYGNRSLAYLRTECYGYALGDATRAIELD---KKYIKGYYRR-- 84 (159)
T ss_dssp TTCHHHHHHHHHHHHHH--STTCH-----------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTCHHHHHHH--
T ss_pred cCCHHHHHHHhhhcccc--chhhh-----------hhhhhhHHHHHhccccchHHHHHHHHHHHc---ccchHHHHHH--
Confidence 45666777777777762 23221 22245677778888888877766654 221 2333334333
Q ss_pred HHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHHHHHHHHcCCHHHHH
Q 016792 153 ILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQFVEILRKGSREEAL 205 (382)
Q Consensus 153 I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~fIeLl~~~~~~eAl 205 (382)
..-....|+++.|+++++.- +.-..++.++.....+.-.++..+...+|+
T Consensus 85 g~~~~~~g~~~eA~~~~~~a---~~~~p~~~~~~~~l~~~~~~~~~~~~~~a~ 134 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETV---VKVKPHDKDAKMKYQECNKIVKQKAFERAI 134 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHH---HHHSTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23344679999999998764 222233444444333333344433344444
No 85
>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.78 E-value=27 Score=23.07 Aligned_cols=23 Identities=39% Similarity=0.465 Sum_probs=18.1
Q ss_pred HHHHHHHH--cCChHHHHHHHHhcc
Q 016792 151 YQILEAMK--SGNLEPALKWAAANS 173 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n~ 173 (382)
.+.+.+|+ .+|++.|++|+-.|.
T Consensus 34 ~~a~~AL~~~~~n~e~A~~~Lls~~ 58 (63)
T d1wgna_ 34 ECVLRAMKKKGENIEQILDYLFAHS 58 (63)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 45677776 589999999997763
No 86
>d1xjha_ g.81.1.1 (A:) HSP33, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.72 E-value=8.3 Score=25.57 Aligned_cols=30 Identities=13% Similarity=0.334 Sum_probs=21.4
Q ss_pred hhhHHHHHHHHhc-CCCccccCCCCCcCCcc
Q 016792 346 VLCRQSINKMSKN-HSRTFKCPYCPSDIDAA 375 (382)
Q Consensus 346 v~~~~~l~~l~~~-~~~~~kCP~c~~~~~~~ 375 (382)
.++.+-+..|... +.-.+.|.||++.+.++
T Consensus 20 ~l~~~El~~~~~e~g~iev~C~fC~~~Y~f~ 50 (62)
T d1xjha_ 20 TLPDEEVDSILAEDGEIDMHCDYCGNHYLFN 50 (62)
T ss_dssp TSCHHHHHHHHHHHSEEEEECTTTCCEEEEE
T ss_pred hcCHHHHHHHHhcCCCEEEEeeCCCCEEEEC
Confidence 3566777777544 33369999999998765
No 87
>d1vqoz1 g.41.8.1 (Z:10-82) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=25.51 E-value=13 Score=25.65 Aligned_cols=10 Identities=40% Similarity=1.065 Sum_probs=8.7
Q ss_pred ccccCCCCCc
Q 016792 362 TFKCPYCPSD 371 (382)
Q Consensus 362 ~~kCP~c~~~ 371 (382)
..+||+|+..
T Consensus 27 ky~Cp~Cgk~ 36 (73)
T d1vqoz1 27 DHACPNCGED 36 (73)
T ss_dssp CBCCSSSSCS
T ss_pred CccCCCCCCc
Confidence 7899999875
No 88
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.22 E-value=8.6 Score=23.17 Aligned_cols=16 Identities=13% Similarity=0.571 Sum_probs=13.2
Q ss_pred CccccCCCCCcCCccc
Q 016792 361 RTFKCPYCPSDIDAAQ 376 (382)
Q Consensus 361 ~~~kCP~c~~~~~~~~ 376 (382)
+.++|.+|++.|..+.
T Consensus 4 Kpy~C~~Cgk~F~~~~ 19 (39)
T d2epsa1 4 KPYICQSCGKGFSRPD 19 (39)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCccCCCCCCCcCChH
Confidence 4699999999988654
No 89
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.19 E-value=1.2e+02 Score=22.36 Aligned_cols=82 Identities=11% Similarity=0.006 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCChHhhhccccCCHHHHHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHH
Q 016792 74 QKELNIALSKYTKILEKSFNPDISKAYRNIEFDTHTVSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQI 153 (382)
Q Consensus 74 ~k~~~~~~~k~~k~idk~f~~~l~~~~~~~~~~~~~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I 153 (382)
.+++..++..|.++|+. .|+- ..+..-++.-+.+.|.++.|....+.+=- . ++.....+..+..+
T Consensus 17 ~g~~~~Ai~~~~kal~~--~p~~-----------~~~~~~lg~~y~~~~~~~~Ai~~~~~al~-l-~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 17 GRKYPEAAACYGRAITR--NPLV-----------AVYYTNRALCYLKMQQPEQALADCRRALE-L-DGQSVKAHFFLGQC 81 (201)
T ss_dssp TTCHHHHHHHHHHHHHH--CSCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHTT-S-CTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh--CCCC-----------HHHHHhHHHHHhhhhhhhhhhHHHHHHHH-h-CCCcHHHHHHHHHH
Confidence 45677778888888874 2221 12333456678999999988888877632 2 24444455444444
Q ss_pred HHHHHcCChHHHHHHHHhc
Q 016792 154 LEAMKSGNLEPALKWAAAN 172 (382)
Q Consensus 154 ~~~L~~gdl~~Al~W~~~n 172 (382)
. ...|+++.|+.+.+.-
T Consensus 82 ~--~~l~~~~~A~~~~~~a 98 (201)
T d2c2la1 82 Q--LEMESYDEAIANLQRA 98 (201)
T ss_dssp H--HHTTCHHHHHHHHHHH
T ss_pred H--HHCCCHHHHHHHHHHH
Confidence 4 3459999999998753
No 90
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.96 E-value=11 Score=20.86 Aligned_cols=12 Identities=58% Similarity=1.292 Sum_probs=9.0
Q ss_pred CccccCCCCCcC
Q 016792 361 RTFKCPYCPSDI 372 (382)
Q Consensus 361 ~~~kCP~c~~~~ 372 (382)
+.|||-||.-..
T Consensus 1 rPFkC~~CsFDt 12 (29)
T d1x5wa2 1 RPFKCNYCSFDT 12 (29)
T ss_dssp CSEECSSSSCEE
T ss_pred CCcccceecccc
Confidence 369999997544
No 91
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.91 E-value=29 Score=23.57 Aligned_cols=23 Identities=35% Similarity=0.531 Sum_probs=17.8
Q ss_pred HHHHHHHH--cCChHHHHHHHHhcc
Q 016792 151 YQILEAMK--SGNLEPALKWAAANS 173 (382)
Q Consensus 151 ~~I~~~L~--~gdl~~Al~W~~~n~ 173 (382)
.+.+.+|+ ++|++.|++|+-.|.
T Consensus 44 ~~a~~AL~~~~~n~e~Av~~Lls~~ 68 (73)
T d1wiva_ 44 DVARKALKASGGDIEKATDWVFNNS 68 (73)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 34566776 589999999998874
No 92
>d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.86 E-value=27 Score=23.09 Aligned_cols=23 Identities=22% Similarity=0.508 Sum_probs=16.5
Q ss_pred HHHHHHH---cCChHHHHHHHHhcch
Q 016792 152 QILEAMK---SGNLEPALKWAAANSD 174 (382)
Q Consensus 152 ~I~~~L~---~gdl~~Al~W~~~n~~ 174 (382)
+.+.+|+ +.+++.|++|+-+|..
T Consensus 25 ~a~~AL~~t~n~~~e~A~~Wl~~h~~ 50 (64)
T d1whca_ 25 RAEKALALTGNQGIEAAMDWLMEHED 50 (64)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHCCC
Confidence 3345554 4579999999998853
No 93
>d1a6sa_ a.61.1.4 (A:) GAG polyprotein M-domain {Rous sarcoma virus [TaxId: 11886]}
Probab=24.50 E-value=49 Score=23.10 Aligned_cols=52 Identities=17% Similarity=0.277 Sum_probs=34.2
Q ss_pred HHHHHhcCCchhhhHHHHHHHHHhHcccCCCCCCCchhhcccCChHHHHHHHHHH
Q 016792 206 KYARANLAPFASNHVNEIQKLMACLIWARKLESCPYPQLVSQTNWVTVAEELTRQ 260 (382)
Q Consensus 206 ~yar~~l~~f~~~~~~eiq~lm~~L~f~~~~~~spy~~Ll~~~~w~~l~~~F~~e 260 (382)
..+++|.....+ -.+||..+.+.|.-.. .-.+| .++++|.+|+.+...|...
T Consensus 10 ~~ck~~~gk~sp-skKei~a~ls~L~~eG-~l~sP-~di~~pg~Wd~~TAaLaqr 61 (87)
T d1a6sa_ 10 SACKTYCGKTSP-SKKEIGAMLSLLQKEG-LLMSP-SDLYSPGSWDPITAALSQR 61 (87)
T ss_dssp HHHHHHHTTTSS-CSSHHHHHHHTGGGTT-CTTCG-GGGGSTTTTHHHHHHHHHT
T ss_pred HHHHHHcCCCCC-cHHHHHHHHHHHHHcc-CcCCc-hhhcCCCchHHHHHHHHHH
Confidence 345556555443 3457887777766543 23355 7999999999987777654
No 94
>d2id6a1 a.4.1.9 (A:1-75) Transcriptional regulator TM1030 {Thermotoga maritima [TaxId: 2336]}
Probab=24.22 E-value=51 Score=21.65 Aligned_cols=61 Identities=11% Similarity=0.077 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHhCcHHH-HHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHH
Q 016792 107 THTVSQIIASHFYRQGLFEV-GDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWA 169 (382)
Q Consensus 107 ~~~lnrlI~~hLlR~G~~e~-a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~ 169 (382)
++.|-+.-...+.+.|+-.+ -..+++++|+.. ..++.-|.....++.++...-.+...+++
T Consensus 5 R~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~--~~iY~~F~~k~~Ll~~~~~~~~~~~~~~~ 66 (75)
T d2id6a1 5 RDAILKAAVEVFGKKGYDRATTDEIAEKAGVAK--GLIFHYFKNKEELYYQAYMSVTEKLQKEF 66 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHHHHHTCCT--HHHHHHHSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccccCHHHHHHHhCCCH--HHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45566677888999997654 667889999976 66777777777777766544444444443
No 95
>d1dx8a_ g.41.5.1 (A:) Rubredoxin {Guillardia theta [TaxId: 55529]}
Probab=24.03 E-value=4.3 Score=28.00 Aligned_cols=10 Identities=50% Similarity=1.202 Sum_probs=8.2
Q ss_pred ccccCCCCCc
Q 016792 362 TFKCPYCPSD 371 (382)
Q Consensus 362 ~~kCP~c~~~ 371 (382)
...||.|+..
T Consensus 40 dW~CP~Cga~ 49 (70)
T d1dx8a_ 40 SFMCPACRSP 49 (70)
T ss_dssp TCBCTTTCCB
T ss_pred CCCCcCCCCc
Confidence 5899999864
No 96
>d1ibia1 g.39.1.3 (A:117-144) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=23.42 E-value=12 Score=20.68 Aligned_cols=9 Identities=33% Similarity=1.010 Sum_probs=7.2
Q ss_pred ccCCCCCcC
Q 016792 364 KCPYCPSDI 372 (382)
Q Consensus 364 kCP~c~~~~ 372 (382)
+||.|++..
T Consensus 3 ~CpRC~~~V 11 (28)
T d1ibia1 3 KCSRCGDSV 11 (28)
T ss_dssp ECTTTSSEE
T ss_pred cCcccchhH
Confidence 799998754
No 97
>d1xmka1 a.4.5.19 (A:294-366) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.36 E-value=29 Score=23.76 Aligned_cols=47 Identities=13% Similarity=0.204 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHH-cCCh
Q 016792 107 THTVSQIIASHFYRQGLFEVGDCFISETKESECSAAILSIFEDMYQILEAMK-SGNL 162 (382)
Q Consensus 107 ~~~lnrlI~~hLlR~G~~e~a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~-~gdl 162 (382)
...+.+-|++||...|- .+|-.++++.|+.. .. +.++++-+|. .|++
T Consensus 3 ~~d~eekI~~~L~~~g~-~~Al~iak~lGl~k--ak------eVN~~LY~L~k~g~v 50 (73)
T d1xmka1 3 MAEIKEKICDYLFNVSD-SSALNLAKNIGLTK--AR------DINAVLIDMERQGDV 50 (73)
T ss_dssp HHHHHHHHHHHHHHTCC-EEHHHHHHHHCGGG--HH------HHHHHHHHHHHTTSE
T ss_pred hHHHHHHHHHHHHHcCC-chHHHHHHHhCCCc--HH------HHhHHHHHHHHCCCe
Confidence 45678899999999994 67888999999865 21 2466666665 3543
No 98
>d1koha2 d.58.7.2 (A:105-200) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.24 E-value=25 Score=25.41 Aligned_cols=41 Identities=15% Similarity=0.356 Sum_probs=29.3
Q ss_pred eeccCchhhhHHHHHHHHhcCCCccccCCCCCcCCccccccccC
Q 016792 339 MIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 382 (382)
Q Consensus 339 ~~l~cGhv~~~~~l~~l~~~~~~~~kCP~c~~~~~~~~~~~v~f 382 (382)
|.+|+|+-|.++-|.++.+.- -.=|+.|..++...-+-.||
T Consensus 18 VtIp~G~kYdK~wLl~~iq~~---~pv~F~Pv~fh~~~~~a~Ff 58 (96)
T d1koha2 18 ITIPYGRKYDKAWLLSMIQSK---SSVPFTPIEFHYENTRAQFF 58 (96)
T ss_dssp CCBTTCTTSCHHHHHHHHHHT---CSSCCCCBSCCEETTEECCE
T ss_pred EEecCccccCHHHHHHHHHhc---CCCCceeEEEEEcCCEEEEE
Confidence 668999999999998876542 23356788888776555543
No 99
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.58 E-value=15 Score=19.67 Aligned_cols=13 Identities=23% Similarity=0.698 Sum_probs=9.6
Q ss_pred cccCCCCCcCCcc
Q 016792 363 FKCPYCPSDIDAA 375 (382)
Q Consensus 363 ~kCP~c~~~~~~~ 375 (382)
+.||.|.+.|...
T Consensus 1 vqcp~c~k~f~sk 13 (27)
T d2dlqa4 1 VECPTCHKKFLSK 13 (27)
T ss_dssp CCCTTTCCCCSSH
T ss_pred CcCcchHHHHHHh
Confidence 3699998887543
No 100
>d2hs5a2 a.78.1.1 (A:94-231) Putative transcriptional regulator RHA1_ro03477 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=22.39 E-value=48 Score=24.10 Aligned_cols=29 Identities=21% Similarity=0.214 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHhcc
Q 016792 145 SIFEDMYQILEAMKSGNLEPALKWAAANS 173 (382)
Q Consensus 145 ~~f~~~~~I~~~L~~gdl~~Al~W~~~n~ 173 (382)
..+.+...|+++|..||.+.|.+++..|=
T Consensus 98 ~~~~~H~~i~~ai~~~d~~~A~~~~~~Hl 126 (138)
T d2hs5a2 98 PYLTRNHEIYDALAAGNTEAAGQLLKTYL 126 (138)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34566789999999999999999998873
No 101
>d1jj2y_ g.41.8.1 (Y:) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=22.38 E-value=16 Score=25.15 Aligned_cols=10 Identities=40% Similarity=0.959 Sum_probs=8.5
Q ss_pred ccccCCCCCc
Q 016792 362 TFKCPYCPSD 371 (382)
Q Consensus 362 ~~kCP~c~~~ 371 (382)
..+||+|++.
T Consensus 27 ky~Cp~Cgk~ 36 (73)
T d1jj2y_ 27 KHKCPVCGFK 36 (73)
T ss_dssp CBCCSSSCCS
T ss_pred CccCCCCCCC
Confidence 6899999864
No 102
>d1jr3a1 a.80.1.1 (A:243-368) gamma subunit {Escherichia coli [TaxId: 562]}
Probab=22.02 E-value=42 Score=24.41 Aligned_cols=23 Identities=22% Similarity=0.232 Sum_probs=20.2
Q ss_pred HHHHHHHHHcCChHHHHHHHHhc
Q 016792 150 MYQILEAMKSGNLEPALKWAAAN 172 (382)
Q Consensus 150 ~~~I~~~L~~gdl~~Al~W~~~n 172 (382)
+..+.++|.+||...|++++++.
T Consensus 7 ~~~L~~~I~~~d~~~~L~~l~~i 29 (126)
T d1jr3a1 7 ALSLVEAMVEANGERVMALINEA 29 (126)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 56789999999999999999875
No 103
>d1veka_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=21.90 E-value=31 Score=24.10 Aligned_cols=23 Identities=22% Similarity=0.427 Sum_probs=16.9
Q ss_pred HHHHHHH---cCChHHHHHHHHhcch
Q 016792 152 QILEAMK---SGNLEPALKWAAANSD 174 (382)
Q Consensus 152 ~I~~~L~---~gdl~~Al~W~~~n~~ 174 (382)
+.+.+|+ +++++.|++|+-+|..
T Consensus 45 ~a~~AL~~t~n~~~e~A~~Wl~~h~~ 70 (84)
T d1veka_ 45 HCQKAAINTSNAGVEEAMNWLLSHMD 70 (84)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHcCC
Confidence 3455553 4689999999998864
No 104
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=21.27 E-value=60 Score=27.11 Aligned_cols=55 Identities=18% Similarity=0.146 Sum_probs=40.5
Q ss_pred HHHHHHcCChHHHHHHHHhcchHhhhcCCchhhhchHHHHHHHHHcCCHHHHHHHHHHhc
Q 016792 153 ILEAMKSGNLEPALKWAAANSDKLTQNGSDLQLKLHSLQFVEILRKGSREEALKYARANL 212 (382)
Q Consensus 153 I~~~L~~gdl~~Al~W~~~n~~~L~~~~s~LeF~L~~q~fIeLl~~~~~~eAl~yar~~l 212 (382)
..++|..|+++.|++.+++. ++... =...++..-+--++..|+..+|+...++-+
T Consensus 3 ~~~aL~~G~l~eAl~~l~~a---l~~~P--~d~~ar~~La~lL~~~G~~e~A~~~l~~a~ 57 (264)
T d1zbpa1 3 WKNALSEGQLQQALELLIEA---IKASP--KDASLRSSFIELLCIDGDFERADEQLMQSI 57 (264)
T ss_dssp HHHHTTTTCHHHHHHHHHHH---HHTCT--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHH---HHHCC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 46788999999999999873 44432 334455555666778899999998888654
No 105
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.00 E-value=9.8 Score=21.05 Aligned_cols=17 Identities=24% Similarity=0.604 Sum_probs=13.9
Q ss_pred ccccCCCCCcCCccccc
Q 016792 362 TFKCPYCPSDIDAAQCR 378 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~~~ 378 (382)
.|.|-.|+..|..++-+
T Consensus 3 Pf~C~~CgrkFArsder 19 (28)
T d1a1ia3 3 PFACDICGRKFARSDER 19 (28)
T ss_dssp CEECTTTCCEESSHHHH
T ss_pred Ccccchhhhhhhcchhh
Confidence 58899999999887755
No 106
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.84 E-value=1.2e+02 Score=20.66 Aligned_cols=70 Identities=4% Similarity=0.072 Sum_probs=34.2
Q ss_pred HHHHHHHhhhhhchhhhHHHHHHHHHHHHHHHHHHhhc-CCCChHHHHHHHHHHHHhhhhhhhhHhhHHHHHHHHHHHHH
Q 016792 8 DAFDRVAKKQKLSCSKTQEVIDLIVQEIEKALETVKSA-SHLDDKYVLTELKRRLQDIAPLGQLEGTQKELNIALSKYTK 86 (382)
Q Consensus 8 ~~~~~~~~k~~~~~~~~~~~id~~~~~l~~~~~~~~~~-~~~~~~~~l~~l~~~~~~~~~~~~~~~~~k~~~~~~~k~~k 86 (382)
.++.+.+.++.. ....|+..++.|....+.|... .+ ........... +......+++..|..+..
T Consensus 8 ~~l~~~A~~~~~----~~~~l~~~l~~l~~~v~~l~~~W~G-~A~~af~~~~~---------~w~~~~~~l~~~L~~i~~ 73 (99)
T d1wa8a1 8 ATLAQEAGNFER----ISGDLKTQIDQVESTAGSLQGQWRG-AAGTAAQAAVV---------RFQEAANKQKQELDEIST 73 (99)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHTSCCS-SHHHHHHHHHH---------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHH---------HHHHHHHHHHHHHHHHHH
Confidence 345555555544 4455555556666666666543 22 23333333222 233334555555555665
Q ss_pred HHhhc
Q 016792 87 ILEKS 91 (382)
Q Consensus 87 ~idk~ 91 (382)
.|++.
T Consensus 74 ~L~~a 78 (99)
T d1wa8a1 74 NIRQA 78 (99)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 107
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=20.43 E-value=52 Score=21.17 Aligned_cols=58 Identities=10% Similarity=0.015 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHhCcHHH-HHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHH
Q 016792 107 THTVSQIIASHFYRQGLFEV-GDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPAL 166 (382)
Q Consensus 107 ~~~lnrlI~~hLlR~G~~e~-a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al 166 (382)
++.|-....+-|.+.|+-.+ -..+++++|+.. ..+..-|.....++.++...-++...
T Consensus 3 ~e~i~~aa~~l~~~~G~~~~ti~~Ia~~agvs~--~~iy~~F~sK~~L~~~~~~~~~~~~~ 61 (69)
T d2np5a1 3 PERLAAALFDVAAESGLEGASVREVAKRAGVSI--GAVQHHFSTKDEMFAFALRTLVDKLL 61 (69)
T ss_dssp HHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCH--HHHHHHCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccccCHHHHHHHhCCCH--HHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 45566778888999998764 667888999976 56666677777777766544333333
No 108
>d2akla2 g.41.3.5 (A:3-40) Hypothetical protein PA0128, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.40 E-value=17 Score=21.71 Aligned_cols=15 Identities=27% Similarity=0.560 Sum_probs=11.9
Q ss_pred ccccCCCCCcCCccc
Q 016792 362 TFKCPYCPSDIDAAQ 376 (382)
Q Consensus 362 ~~kCP~c~~~~~~~~ 376 (382)
-..||.|..++...+
T Consensus 3 lP~CP~C~seytYed 17 (38)
T d2akla2 3 LPPCPQCNSEYTYED 17 (38)
T ss_dssp SCCCTTTCCCCCEEC
T ss_pred CCcCCCCCCcceEcC
Confidence 358999999988765
No 109
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.19 E-value=2e+02 Score=22.87 Aligned_cols=30 Identities=10% Similarity=0.214 Sum_probs=16.8
Q ss_pred hhhHhhHHHHHHHHHHHHHHHhhcCCCChH
Q 016792 68 GQLEGTQKELNIALSKYTKILEKSFNPDIS 97 (382)
Q Consensus 68 ~~~~~~~k~~~~~~~k~~k~idk~f~~~l~ 97 (382)
.++...++++...+.++-...+..|..+++
T Consensus 172 ~~~~~~~~~y~~~l~~~n~~~~~~~~~~~p 201 (279)
T d2efka1 172 HMAEESKNEYAAQLQRFNRDQAHFYFSQMP 201 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555666666666666666554444333
No 110
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=20.13 E-value=41 Score=22.28 Aligned_cols=62 Identities=13% Similarity=0.078 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHhCcHHH-HHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 016792 107 THTVSQIIASHFYRQGLFEV-GDCFISETKESECSAAILSIFEDMYQILEAMKSGNLEPALKWAA 170 (382)
Q Consensus 107 ~~~lnrlI~~hLlR~G~~e~-a~~f~~Es~~~~~~~~~~~~f~~~~~I~~~L~~gdl~~Al~W~~ 170 (382)
+..|-..-..-|.+.|+-.+ -..+++++|+.. ..+..-|.....+..++...-.+...+++.
T Consensus 8 r~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~--~~lY~~F~~K~~L~~~~~~~~~~~~~~~~~ 70 (77)
T d2gfna1 8 RRALADAVLALIAREGISAVTTRAVAEESGWST--GVLNHYFGSRHELLLAALRRAGDIQGDRYR 70 (77)
T ss_dssp HHHHHHHHHHHHHHHCGGGCCHHHHHHHHSSCH--HHHHHHTSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccccCHHHHHHHHCCCH--HHHHHHCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666788999998764 577899999976 566666777777777766544444444443
Done!