BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 016795
         (382 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2YEQ|A Chain A, Structure Of Phod
 pdb|2YEQ|B Chain B, Structure Of Phod
          Length = 527

 Score = 30.0 bits (66), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 25/103 (24%)

Query: 248 LWPNAMYTY--KLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNE 305
           L PN +Y Y  K GH L       S   + K  P PG +  Q    F    +        
Sbjct: 82  LEPNKVYYYRFKTGHEL-------SPVGKTKTLPAPGANVPQMTFAFASCQQ-------- 126

Query: 306 YNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYA---NGYISQ 345
              ++ G     + + ++   +D+VFH+GD  Y    N Y+S+
Sbjct: 127 ---YEHGYYTAYKHMAKE--KLDLVFHLGDYIYEYGPNEYVSK 164


>pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
 pdb|1KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
 pdb|1KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
 pdb|1KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
 pdb|3KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
 pdb|3KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
 pdb|3KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
 pdb|3KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
 pdb|4KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
 pdb|4KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
 pdb|4KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
 pdb|4KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
          Length = 432

 Score = 29.6 bits (65), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 27/123 (21%)

Query: 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGK 297
           G+IH   +R+L  N  Y Y++G R  N T      + F   P  G D      + GD+G 
Sbjct: 85  GFIHHTTIRKLKYNTKYYYEVGLR--NTT----RRFSFITPPQTGLDVPYTFGLIGDLG- 137

Query: 298 DEADGSNEYNNFQRGSLNTTRQLIQ-DLKNIDIVFHIGDICYANGYISQ-------WDQF 349
                       Q    NTT    +   K    V  +GD+ YA+ Y +        W +F
Sbjct: 138 ------------QSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRF 185

Query: 350 TAQ 352
           T +
Sbjct: 186 TER 188


>pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc24201
 pdb|4DSY|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc24201
 pdb|4DSY|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc24201
 pdb|4DSY|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc24201
 pdb|4DT2|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc27209
 pdb|4DT2|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc27209
 pdb|4DT2|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc27209
 pdb|4DT2|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc27209
 pdb|4DHL|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Mo07123
 pdb|4DHL|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Mo07123
 pdb|4DHL|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Mo07123
 pdb|4DHL|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Mo07123
          Length = 426

 Score = 29.6 bits (65), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 27/123 (21%)

Query: 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGK 297
           G+IH   +R+L  N  Y Y++G R  N T      + F   P  G D      + GD+G 
Sbjct: 79  GFIHHTTIRKLKYNTKYYYEVGLR--NTT----RRFSFITPPQTGLDVPYTFGLIGDLG- 131

Query: 298 DEADGSNEYNNFQRGSLNTTRQLIQ-DLKNIDIVFHIGDICYANGYISQ-------WDQF 349
                       Q    NTT    +   K    V  +GD+ YA+ Y +        W +F
Sbjct: 132 ------------QSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRF 179

Query: 350 TAQ 352
           T +
Sbjct: 180 TER 182


>pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Fluoride
 pdb|2QFP|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Fluoride
 pdb|2QFP|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Fluoride
 pdb|2QFP|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Fluoride
 pdb|2QFR|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase With Bound Sulfate
 pdb|2QFR|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase With Bound Sulfate
          Length = 424

 Score = 29.6 bits (65), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 27/123 (21%)

Query: 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGK 297
           G+IH   +R+L  N  Y Y++G R  N T      + F   P  G D      + GD+G 
Sbjct: 77  GFIHHTTIRKLKYNTKYYYEVGLR--NTT----RRFSFITPPQTGLDVPYTFGLIGDLG- 129

Query: 298 DEADGSNEYNNFQRGSLNTTRQLIQ-DLKNIDIVFHIGDICYANGYISQ-------WDQF 349
                       Q    NTT    +   K    V  +GD+ YA+ Y +        W +F
Sbjct: 130 ------------QSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRF 177

Query: 350 TAQ 352
           T +
Sbjct: 178 TER 180


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.320    0.137    0.441 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,174,063
Number of Sequences: 62578
Number of extensions: 614092
Number of successful extensions: 1055
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1054
Number of HSP's gapped (non-prelim): 6
length of query: 382
length of database: 14,973,337
effective HSP length: 101
effective length of query: 281
effective length of database: 8,652,959
effective search space: 2431481479
effective search space used: 2431481479
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)