BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016798
(382 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZB8|AB29B_ARATH ABC transporter B family member 29, chloroplastic OS=Arabidopsis
thaliana GN=ABCB29 PE=1 SV=1
Length = 634
Score = 525 bits (1351), Expect = e-148, Method: Compositional matrix adjust.
Identities = 255/379 (67%), Positives = 323/379 (85%)
Query: 1 MATQMLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAIL 60
M M+V SP L+L+SA+VIPS+AL+IAYLG+RLRKIS+++ ++ A LS YLNEVLPAIL
Sbjct: 209 MTAHMIVASPALTLVSAMVIPSVALLIAYLGDRLRKISRKAQIASAQLSTYLNEVLPAIL 268
Query: 61 FVKANNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSG 120
FVKANNAE+ ES RF+R A +DL E KK+KMK+LIPQ VQ++Y G+L I C G+++++G
Sbjct: 269 FVKANNAEISESVRFQRFARADLDERFKKKKMKSLIPQIVQVMYLGSLSIFCVGAVILAG 328
Query: 121 GSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVS 180
S ++VSF+ SL F+I+P+Q +GKAYNE KQGEPAIERLFDLT +SKVIE+P+A+
Sbjct: 329 SSLSSSAIVSFVASLAFLIDPVQDLGKAYNELKQGEPAIERLFDLTSLESKVIERPEAIQ 388
Query: 181 LDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYD 240
L+ + G+V+ C+ISFKY +NM VLD LNLHI+AGETVAL+GPSGGGK+TL KLLLRLY+
Sbjct: 389 LEKVAGEVELCDISFKYDENMLPVLDGLNLHIKAGETVALVGPSGGGKTTLIKLLLRLYE 448
Query: 241 PLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
P SG I++D D+++I+L+SLR+HVGLVSQD TLFSGT+A+NIGYRDL T IDM+RVE
Sbjct: 449 PSSGSIIIDKIDIKDIKLESLRKHVGLVSQDTTLFSGTIADNIGYRDLTTGIDMKRVELA 508
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+TANADEF+R LP+GYNT +GPRGSSLSGGQ+QRLAIARALYQ SS+LILDEATSALDS
Sbjct: 509 AKTANADEFIRNLPEGYNTGVGPRGSSLSGGQKQRLAIARALYQKSSILILDEATSALDS 568
Query: 361 RSELLVRQAVDRLLGHHTV 379
SELLVR+A++R++ HTV
Sbjct: 569 LSELLVREALERVMQDHTV 587
>sp|Q2LVL0|MSBA_SYNAS Lipid A export ATP-binding/permease protein MsbA OS=Syntrophus
aciditrophicus (strain SB) GN=msbA PE=3 SV=1
Length = 601
Score = 247 bits (631), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 222/371 (59%), Gaps = 11/371 (2%)
Query: 12 LSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKANNAEMCE 71
L++I+ +V P IA G+++R ++ ++ +++ SL+ L E + V+A E E
Sbjct: 175 LAIIAMIVFPLTIYPIAKFGQKMRSVATRTQVTMGSLTTLLQETISGTRIVRAFCMEAHE 234
Query: 72 SARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFG----ALFILCGGSLLVSGGSFDGCS 127
+ RF R + LK + AL ++ + G A I GG ++ G S G +
Sbjct: 235 NQRFARENEKLMHLALKSVSINALSSPFME--FLGGIGIAAIIFYGGYQVIKGSSTPG-T 291
Query: 128 LVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHINGD 187
SF+T+L+ + EP++ + N +QG +R+F + ++++ +AV L I+
Sbjct: 292 FFSFLTALIMLYEPVKRLTNVNNTIQQGIAGAQRVFSIIDLVPDIVDRDEAVELPRISEK 351
Query: 188 VKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSGCIL 247
++ NISF Y D+ P VL +NL IRAGE VA +G SGGGK+TL L+ R YD +G IL
Sbjct: 352 IEIRNISFAY-DDTP-VLRNINLTIRAGEVVAFVGMSGGGKTTLVNLIPRFYDVTAGQIL 409
Query: 248 VDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTARTANAD 307
+D HD++++ L SLRR +G+V+Q LF+ TV NI Y + + AR ANA
Sbjct: 410 IDGHDIRDVSLISLRRQIGIVTQQTILFNDTVRNNIAYGS--QGCSEKEIIEAARAANAH 467
Query: 308 EFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSELLVR 367
+F+ LP+GY+T IG G+ LSGG+RQR++IARAL +N+ +LILDEATS+LD+ +E+ V+
Sbjct: 468 DFIVNLPEGYDTVIGELGTKLSGGERQRISIARALLKNAPILILDEATSSLDTEAEMEVQ 527
Query: 368 QAVDRLLGHHT 378
+A++RL+ T
Sbjct: 528 EALERLMKGRT 538
>sp|Q1QX69|MSBA_CHRSD Lipid A export ATP-binding/permease protein MsbA
OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB 13768) GN=msbA PE=3 SV=1
Length = 579
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 217/377 (57%), Gaps = 11/377 (2%)
Query: 1 MATQMLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAIL 60
+ + +L + +L+LI V P + LV+ Y +R R++S++ S+ ++ +E L
Sbjct: 152 LVSYLLWTNWMLTLIFMAVTPLIGLVVNYTSKRFRRLSRRIQNSMGDVTHVASEALSGYR 211
Query: 61 FVKANNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYF----GALFILCGGSL 116
V+ + AE E ARF + + + +K KA+ +QL+ G +++ +L
Sbjct: 212 VVRTHGAEAYEKARFAEASDYNREQSMKVALTKAVSTPVIQLLVALSLAGLVWLAMSPAL 271
Query: 117 LVSGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKP 176
+ S V+FIT+ M +P++ + + + ++G A + LF L + +V E
Sbjct: 272 M---ASMTPGEFVAFITAASLMAKPVRQLTEVNSTIQKGLSASQELFGLLEQPPEVDEGS 328
Query: 177 DAVSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLL 236
+ I+G V+F + F+Y ++ VL ++L + GE +A++G SG GKSTL L+
Sbjct: 329 YVPA--RIDGRVRFEGVRFRYGEDQAEVLKGIDLDVPQGEMIAIVGRSGSGKSTLVSLMP 386
Query: 237 RLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMER 296
R Y P G +L+DD D+Q L LR+ + LVSQ +TLF+ T+A NI Y D E
Sbjct: 387 RFYRPTEGRVLLDDVDIQEYALSPLRQRIALVSQQVTLFNTTIAANIAYGH--PDADREA 444
Query: 297 VEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATS 356
VE AR+A A EF+ LP GY+T +G G LSGGQRQRLAIARA+++++ +L+LDEATS
Sbjct: 445 VESAARSAYAHEFIERLPNGYDTVVGDNGVMLSGGQRQRLAIARAIFKDAPLLVLDEATS 504
Query: 357 ALDSRSELLVRQAVDRL 373
ALD+ SE ++QA++R+
Sbjct: 505 ALDTESERYIQQALERV 521
>sp|P71082|YGAD_BACSU Putative multidrug export ATP-binding/permease protein YgaD
OS=Bacillus subtilis (strain 168) GN=ygaD PE=3 SV=2
Length = 580
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 215/378 (56%), Gaps = 9/378 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
ML + L+LIS ++ P + + Y RLRK++++ ++A + +L+E + + +++
Sbjct: 157 MLTLDVKLTLISIVLFPLYGISVKYFYGRLRKLTRERSQALAQVQGHLHERIQGMPVIRS 216
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGA--LFILCGGSLLVSGGS 122
E E A+F L + ++ A V I A + I C G +++G
Sbjct: 217 FAIEDHEQAQFNEKNGHFLDKAIRHTNWNAKTFAVVNTITDLAPLIVIACAGYFVINGPL 276
Query: 123 FDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLD 182
G ++V+F+ + M P++ + + Q +++R+F+ ++ +KP+A+ D
Sbjct: 277 TVG-TMVAFVGYIDRMYNPVRRLINSSTTLTQSIASMDRVFEFIDEPYELTDKPNAIKAD 335
Query: 183 HINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPL 242
I G V+F N+SF+Y + +L ++L + GETVAL+G SGGGKSTL L+ R YD
Sbjct: 336 QIRGGVEFQNVSFQYEKDKENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRFYDVT 395
Query: 243 SGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKID--MERVEHT 300
SG +L+D D+++ SLR VG+V QD LFS T+ ENI + K D +E +
Sbjct: 396 SGRLLIDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIA----IGKPDATLEEIIEA 451
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA EF+ + P+GY T +G RG LSGGQ+QR++IAR +N +LILDEATSALD
Sbjct: 452 AKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDL 511
Query: 361 RSELLVRQAVDRLLGHHT 378
SE +++A+D+L T
Sbjct: 512 ESEHYIQEAMDKLAKDRT 529
>sp|Q6AJW3|MSBA_DESPS Lipid A export ATP-binding/permease protein MsbA OS=Desulfotalea
psychrophila (strain LSv54 / DSM 12343) GN=msbA PE=3
SV=1
Length = 572
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 215/370 (58%), Gaps = 9/370 (2%)
Query: 12 LSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKANNAEMCE 71
L+LI L+IP A+ I G+ RK+S ++ A +S L+E + VKA E E
Sbjct: 161 LALICFLIIPLAAIPIVKFGKIFRKLSTKTQEETAEVSNMLHETISGSRIVKAFCREDYE 220
Query: 72 SARFRRLAHSDLCELLKKRKMKALIPQTVQLI--YFGALFILCGGSLLVSGGSFDGCSLV 129
RF R + +K K + +++I + A I GGS +++G + G +
Sbjct: 221 VERFHRQVETLFTITMKNAKYRVFQSPLMEIIGGFAVAGIIWVGGSEVINGSATPG-TFF 279
Query: 130 SFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHINGDVK 189
+F+T+++ +P++ V + + +QG + +R+F + K ++ +KP+A SL ++
Sbjct: 280 AFLTAMITAYDPVKRVSQVNSTIQQGLASAQRVFAILDIKPEIEDKPEATSLAPFKESIE 339
Query: 190 FCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSGCILVD 249
F ++SF Y +L +NL + AGE +A++GPSGGGK+TL L+ R D G I +D
Sbjct: 340 FHDVSFSYGTEK--ILSHINLKVPAGEALAIVGPSGGGKTTLTNLIPRFIDLQEGSITID 397
Query: 250 DHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY-RDLMTKIDMERVEHTARTANADE 308
D++++ +SLR + +V+Q LF+ T+ NI Y +D T+ E + A+ A+A
Sbjct: 398 GTDIRDVTTNSLRNQIAMVTQQTILFNDTIRNNIAYGKDSCTE---EEIRRAAKAAHALT 454
Query: 309 FVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSELLVRQ 368
F+ LP G++T +G G+ LSGGQRQR++IARAL ++ +LILDEATSALD+ SE V++
Sbjct: 455 FIEELPNGFDTALGEGGAKLSGGQRQRISIARALLADAPILILDEATSALDTESEREVQK 514
Query: 369 AVDRLLGHHT 378
A++ L+ + T
Sbjct: 515 ALENLMQNRT 524
>sp|Q9KQW9|MSBA_VIBCH Lipid A export ATP-binding/permease protein MsbA OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=msbA PE=1 SV=1
Length = 582
Score = 224 bits (571), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 216/378 (57%), Gaps = 4/378 (1%)
Query: 3 TQMLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFV 62
T M S LSL+ +V P +A I+++ +R RKIS+ ++ +++ ++L V
Sbjct: 158 TLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVV 217
Query: 63 KANNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALF-ILCGGSLLVSGG 121
+ + E RF ++++S + +K +++ +Q+I ALF +L S+
Sbjct: 218 LSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRA 277
Query: 122 SFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSL 181
+ +++ ++ P++ + +EF++G A + LF L +++
Sbjct: 278 ELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETE--RDNGKYEA 335
Query: 182 DHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
+ +NG+V +++F Y L ++ I G+TVAL+G SG GKST+A L R YD
Sbjct: 336 ERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDV 395
Query: 242 LSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTA 301
SG I +D HDV++ +L +LRRH LVSQ++ LF+ T+A NI Y + E++E A
Sbjct: 396 DSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYA-AEGEYTREQIEQAA 454
Query: 302 RTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSR 361
R A+A EF+ +PQG +T IG G+SLSGGQRQR+AIARAL +++ VLILDEATSALD+
Sbjct: 455 RQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTE 514
Query: 362 SELLVRQAVDRLLGHHTV 379
SE ++ A+D L + TV
Sbjct: 515 SERAIQAALDELQKNKTV 532
>sp|Q9JI39|ABCBA_MOUSE ATP-binding cassette sub-family B member 10, mitochondrial OS=Mus
musculus GN=Abcb10 PE=2 SV=1
Length = 715
Score = 222 bits (565), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 219/388 (56%), Gaps = 22/388 (5%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M +SP L+ V+P ++++ G LRK+SK + S+A + E + I ++A
Sbjct: 272 MFFVSPSLATFVLSVVPPISVLAVIYGRYLRKLSKATQDSLAEATQLAEERIGNIRTIRA 331
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGA---------LFILCGGS 115
EM E ++ + +LL+ + +AL + +FGA L +L G
Sbjct: 332 FGKEMTEVEKY----TGRVDQLLQLAQKEAL----ARAGFFGAAGLSGNLIVLSVLYKGG 383
Query: 116 LLVSGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEK 175
LL+ L SF+ ++ I G+ Y+E +G A RL++L + + + +
Sbjct: 384 LLMGSAHMTVGELSSFLMYAFWVGLSIGGLSSFYSELMKGLGAGGRLWELLERQPR-LPF 442
Query: 176 PDAVSLDH--INGDVKFCNISFKYADNMPL-VLDQLNLHIRAGETVALIGPSGGGKSTLA 232
+ + LD G ++F N+ F Y + V +L I +G AL+GPSG GKST+
Sbjct: 443 NEGMVLDEKTFQGALEFRNVHFTYPARPEVSVFQDFSLSIPSGSVTALVGPSGSGKSTVV 502
Query: 233 KLLLRLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY-RDLMTK 291
LLLRLYDP SG + +D HD++ + LR +G VSQ+ LFS +VAENI Y D ++
Sbjct: 503 SLLLRLYDPNSGTVSLDGHDIRQLNPVWLRSKIGTVSQEPVLFSCSVAENIAYGADNLSS 562
Query: 292 IDMERVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLIL 351
+ ++VE A ANA EF+R+ PQG++T +G +G LSGGQ+QR+AIARAL +N +L+L
Sbjct: 563 VTAQQVERAAEVANAAEFIRSFPQGFDTVVGEKGILLSGGQKQRIAIARALLKNPKILLL 622
Query: 352 DEATSALDSRSELLVRQAVDRLLGHHTV 379
DEATSALD+ +E LV++A+DRL+ TV
Sbjct: 623 DEATSALDAENEHLVQEALDRLMEGRTV 650
>sp|Q9HUG8|MSBA_PSEAE Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=msbA PE=3 SV=1
Length = 603
Score = 221 bits (564), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 217/374 (58%), Gaps = 4/374 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
+L ++ L+L+ ++P +A+++ + RK SK+ +++ ++ +E + V++
Sbjct: 176 LLWMNWKLTLVMLAILPVIAVMVTTASRKFRKQSKKIQVAMGDVTHVASETIQGYRVVRS 235
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSGGSFD 124
E E RF + S+ + L+ K A+ +QL+ + A+ IL L + G +
Sbjct: 236 FGGEAYEEKRFLDASQSNTDKQLRMTKTGAVYTPMLQLVIYVAMAILMFLVLWLRGDASA 295
Query: 125 GCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHI 184
G LV++IT+ + +PI+ + + + ++G E +F+ + E V + +
Sbjct: 296 G-DLVAYITAAGLLPKPIRQLSEVSSTVQRGVAGAESIFE--QLDEAAEEDQGTVEKERV 352
Query: 185 NGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSG 244
+G ++ N+SF+Y VLD ++ G+ +AL+G SG GKSTLA L+ R Y G
Sbjct: 353 SGRLEVRNLSFRYPGTDKQVLDDISFIAEPGQMIALVGRSGSGKSTLANLVPRFYQHNDG 412
Query: 245 CILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTARTA 304
IL+D +V++ RL +LRRH+ LV+Q +TLF+ +VA NI Y DL E +E A+ A
Sbjct: 413 KILLDGVEVEDYRLRNLRRHIALVTQQVTLFNDSVANNIAYGDL-AGAPREEIERAAKAA 471
Query: 305 NADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSEL 364
NA EF+ LPQG++T +G G LSGGQRQRLAIARAL +++ +LILDEATSALD+ SE
Sbjct: 472 NAKEFIDNLPQGFDTEVGENGVLLSGGQRQRLAIARALLKDAPLLILDEATSALDTESER 531
Query: 365 LVRQAVDRLLGHHT 378
++ A+D ++ T
Sbjct: 532 HIQAALDEVMKGRT 545
>sp|Q2YU20|Y1799_STAAB Putative multidrug export ATP-binding/permease protein SAB1799c
OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=SAB1799c PE=3 SV=1
Length = 578
Score = 221 bits (563), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 205/373 (54%), Gaps = 9/373 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A T+ + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNANFLTRALKHTRWNAYSFATINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + +++F+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIYHVNFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-V 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKVANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRL 373
SE ++++A+D L
Sbjct: 511 ESESIIQEALDVL 523
>sp|Q2G2M9|Y2003_STAA8 Putative multidrug export ATP-binding/permease protein
SAOUHSC_02003 OS=Staphylococcus aureus (strain NCTC
8325) GN=SAOUHSC_02003 PE=3 SV=1
Length = 578
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 204/373 (54%), Gaps = 9/373 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRL 373
SE ++++A+D L
Sbjct: 511 ESESIIQEALDVL 523
>sp|Q6GFJ1|Y1956_STAAR Putative multidrug export ATP-binding/permease protein SAR1956
OS=Staphylococcus aureus (strain MRSA252) GN=SAR1956
PE=3 SV=1
Length = 578
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 204/373 (54%), Gaps = 9/373 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRL 373
SE ++++A+D L
Sbjct: 511 ESESIIQEALDVL 523
>sp|Q5HEQ8|Y1924_STAAC Putative multidrug export ATP-binding/permease protein SACOL1924
OS=Staphylococcus aureus (strain COL) GN=SACOL1924 PE=3
SV=1
Length = 578
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 204/373 (54%), Gaps = 9/373 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRL 373
SE ++++A+D L
Sbjct: 511 ESESIIQEALDVL 523
>sp|Q99T13|Y1866_STAAM Putative multidrug export ATP-binding/permease protein SAV1866
OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=SAV1866 PE=1 SV=1
Length = 578
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 204/373 (54%), Gaps = 9/373 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRL 373
SE ++++A+D L
Sbjct: 511 ESESIIQEALDVL 523
>sp|Q2FFM9|Y1847_STAA3 Putative multidrug export ATP-binding/permease protein
SAUSA300_1847 OS=Staphylococcus aureus (strain USA300)
GN=SAUSA300_1847 PE=3 SV=1
Length = 578
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 204/373 (54%), Gaps = 9/373 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRL 373
SE ++++A+D L
Sbjct: 511 ESESIIQEALDVL 523
>sp|Q7A0J1|Y1806_STAAW Putative multidrug export ATP-binding/permease protein MW1806
OS=Staphylococcus aureus (strain MW2) GN=MW1806 PE=3
SV=1
Length = 578
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 204/373 (54%), Gaps = 9/373 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRL 373
SE ++++A+D L
Sbjct: 511 ESESIIQEALDVL 523
>sp|Q6G868|Y1788_STAAS Putative multidrug export ATP-binding/permease protein SAS1788
OS=Staphylococcus aureus (strain MSSA476) GN=SAS1788
PE=3 SV=1
Length = 578
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 204/373 (54%), Gaps = 9/373 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRL 373
SE ++++A+D L
Sbjct: 511 ESESIIQEALDVL 523
>sp|Q7A4T3|Y1683_STAAN Putative multidrug export ATP-binding/permease protein SA1683
OS=Staphylococcus aureus (strain N315) GN=SA1683 PE=1
SV=1
Length = 578
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 204/373 (54%), Gaps = 9/373 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRL 373
SE ++++A+D L
Sbjct: 511 ESESIIQEALDVL 523
>sp|O06967|BMRA_BACSU Multidrug resistance ABC transporter ATP-binding/permease protein
BmrA OS=Bacillus subtilis (strain 168) GN=bmrA PE=1 SV=1
Length = 589
Score = 219 bits (557), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 211/361 (58%), Gaps = 19/361 (5%)
Query: 26 VIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKANNAEMCESARFRRLAHSDLCE 85
++ +G ++ IS+++ A + LN++LP I VKA+NAE E R ++ S L +
Sbjct: 180 ILVPIGRKMFSISRETQDETARFTGLLNQILPEIRLVKASNAEDVEYGR-GKMGISSLFK 238
Query: 86 L-LKKRKMKALIPQTVQLIYFGALFILCG-GSLLVSGGSFDGCSLVSFITSLVFMIEPIQ 143
L +++ K+++L+ + L+ AL + G G + VS G +LV+FI L +I P+
Sbjct: 239 LGVREAKVQSLVGPLISLVLMAALVAVIGYGGMQVSSGELTAGALVAFILYLFQIIMPMG 298
Query: 144 GVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHING---DVKFCNISFKYADN 200
+ + + ++ A ER+ ++ E+ D V+ I ++ +SF Y +
Sbjct: 299 QITTFFTQLQKSIGATERMIEIL-----AEEEEDTVTGKQIENAHLPIQLDRVSFGYKPD 353
Query: 201 MPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSGCILVDDHDVQNIRLDS 260
L+L +++ I AG+ A++GPSGGGK+TL KLL R Y P +G I + D V L+S
Sbjct: 354 Q-LILKEVSAVIEAGKVTAIVGPSGGGKTTLFKLLERFYSPTAGTIRLGDEPVDTYSLES 412
Query: 261 LRRHVGLVSQDITLFSGTVAENIGY---RDLMTKIDMERVEHTARTANADEFVRTLPQGY 317
R H+G VSQ+ L SGT+ ENI Y RD+ D E +E A A A F++ LP +
Sbjct: 413 WREHIGYVSQESPLMSGTIRENICYGLERDVT---DAE-IEKAAEMAYALNFIKELPNQF 468
Query: 318 NTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSELLVRQAVDRLLGHH 377
+T +G RG LSGGQRQR+AIARAL +N S+L+LDEATS+LDS+SE V+QA++ L+
Sbjct: 469 DTEVGERGIMLSGGQRQRIAIARALLRNPSILMLDEATSSLDSQSEKSVQQALEVLMEGR 528
Query: 378 T 378
T
Sbjct: 529 T 529
>sp|Q5E0F2|MSBA_VIBF1 Lipid A export ATP-binding/permease protein MsbA OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=msbA PE=3 SV=1
Length = 582
Score = 218 bits (554), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 217/384 (56%), Gaps = 20/384 (5%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSL+ ++ P +A I+ + +R RKISK ++ SL+A ++L V +
Sbjct: 160 MFWNSWQLSLVLVVIAPVVAFAISNVSKRFRKISKNMQTAMGSLTATSEQMLKGHKVVLS 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQ-----TVQLIY-FGALFILCGGSLLV 118
+ ES RF +++ ++++ MK ++ Q +Q+I F + +L S+
Sbjct: 220 YGGQKVESERFDNISNH-----MRQQNMKMVVAQGLANPIIQMIASFALVTVLYLASVDS 274
Query: 119 SGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA 178
+ + +++ ++ P++G+ ++F++G A + LF+L EK D
Sbjct: 275 IKETLTPGTFTVVFSAMFGLLRPLKGLTSVTSDFQRGMAACQTLFELMDMDK---EKDDG 331
Query: 179 -VSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLR 237
+ D + GD+K N++F Y L ++ + AG+T+AL+G SG GKST+A L R
Sbjct: 332 TIEKDTVKGDIKVDNVTFTYPTADGPALRNVSFDLPAGKTIALVGRSGSGKSTIANLFTR 391
Query: 238 LYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY--RDLMTKIDME 295
YD SG I +D +++ RL +LR+H LVSQ++ LF+ TVA NI Y T++++E
Sbjct: 392 FYDVDSGEISLDGDKIEDYRLPNLRKHFALVSQNVHLFNDTVANNIAYASEGKFTRLEIE 451
Query: 296 RVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEAT 355
+ A A A +F+ + G++T IG G+SLSGGQRQR+AIARAL QN+ VLILDEAT
Sbjct: 452 K---AAELAYASDFINKMDDGFDTMIGENGASLSGGQRQRIAIARALLQNAPVLILDEAT 508
Query: 356 SALDSRSELLVRQAVDRLLGHHTV 379
SALD+ SE ++ A+D L TV
Sbjct: 509 SALDTESEKAIQSALDELQKDKTV 532
>sp|Q60AA3|MSBA_METCA Lipid A export ATP-binding/permease protein MsbA OS=Methylococcus
capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
GN=msbA PE=3 SV=1
Length = 601
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 229/383 (59%), Gaps = 20/383 (5%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M+ +PVLSL+ ++ P + L + ++ +R R++S + S+ +S EV+ A VK
Sbjct: 165 MVYQNPVLSLVFLVLGPVLGLSVRFVSKRFRRLSMRIQESMGKVSHVTQEVIDAQRIVKV 224
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMK-----ALIPQTVQLIYF-GALFILCGGSLLV 118
N + E+A+F + +KR+MK AL + LI G IL SL
Sbjct: 225 FNGKDYEAAKFATENDRN-----QKRQMKLIATDALGGGVIHLISVAGVAGILYVVSLDS 279
Query: 119 SGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLF---DLTKFKSKVIEK 175
+ SL++FI ++ M+ PI+ + + + ++G A + +F DL + + +
Sbjct: 280 VRQTITPGSLMAFIAAMAMMLSPIRRLSQVVSVMQRGIAAGDSIFAMLDLPRERDR---- 335
Query: 176 PDAVSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLL 235
+SL G +++ ++S Y D +D ++L I AG+TVAL+G SG GK++L +LL
Sbjct: 336 -GRISLKRARGSIEYRHVSLVYDDRHGAAVDDVSLVIPAGKTVALVGQSGSGKTSLVRLL 394
Query: 236 LRLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDME 295
RLY+ +G IL+D HD++ + L+SLRR + V Q++TLF+ TVA NI Y + ++ ++
Sbjct: 395 PRLYEATAGEILIDGHDIRELTLESLRRQIAYVGQEVTLFNDTVASNIAY-GCLDRVGLD 453
Query: 296 RVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEAT 355
V AR ANA +F+ TLPQG++T +G +G LSGGQRQR+AIARAL +N+ +LILDEAT
Sbjct: 454 AVREAARAANALDFIETLPQGFDTLVGQQGIVLSGGQRQRIAIARALLKNAPILILDEAT 513
Query: 356 SALDSRSELLVRQAVDRLLGHHT 378
SALD+ SE V+QA++ L+ + T
Sbjct: 514 SALDAESERYVQQALEVLMQNRT 536
>sp|Q9NRK6|ABCBA_HUMAN ATP-binding cassette sub-family B member 10, mitochondrial OS=Homo
sapiens GN=ABCB10 PE=1 SV=2
Length = 738
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 217/391 (55%), Gaps = 24/391 (6%)
Query: 3 TQMLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFV 62
+ M +SP L+ V+P ++++ G LRK++K + S+A + E + + V
Sbjct: 305 SMMFFVSPNLATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTV 364
Query: 63 KANNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGA---------LFILCG 113
+A EM E ++ S + +++ + +A + +FGA L +L
Sbjct: 365 RAFGKEMTEIEKY----ASKVDHVMQLARKEAF----ARAGFFGATGLSGNLIVLSVLYK 416
Query: 114 GSLLVSGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVI 173
G LL+ L SF+ ++ I G+ Y+E +G A RL++L + + K+
Sbjct: 417 GGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLP 476
Query: 174 EKPDAVSLDH--INGDVKFCNISFKYA--DNMPLVLDQLNLHIRAGETVALIGPSGGGKS 229
+ V L+ G ++F N+ F Y +P+ D +L I +G AL+GPSG GKS
Sbjct: 477 FN-EGVILNEKSFQGALEFKNVHFAYPARPEVPIFQD-FSLSIPSGSVTALVGPSGSGKS 534
Query: 230 TLAKLLLRLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY-RDL 288
T+ LLLRLYDP SG I +D HD++ + LR +G VSQ+ LFS ++AENI Y D
Sbjct: 535 TVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADD 594
Query: 289 MTKIDMERVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSV 348
+ + E ++ A ANA F+R PQG+NT +G +G LSGGQ+QR+AIARAL +N +
Sbjct: 595 PSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKI 654
Query: 349 LILDEATSALDSRSELLVRQAVDRLLGHHTV 379
L+LDEATSALD+ +E LV++A+DRL+ TV
Sbjct: 655 LLLDEATSALDAENEYLVQEALDRLMDGRTV 685
>sp|Q7N6C6|MSBA_PHOLL Lipid A export ATP-binding/permease protein MsbA OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=msbA PE=3
SV=1
Length = 581
Score = 214 bits (546), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 207/376 (55%), Gaps = 6/376 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSLI ++ P ++LVI + +R R ISK S+ ++A ++L V
Sbjct: 159 MFYYSWQLSLILIVIAPIVSLVIRVVSKRFRSISKNMQNSMGQVTASAEQMLKGHKEVLI 218
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI F F+L S +
Sbjct: 219 FGGQNVETERFNKVSNHMRQQGMKMVSASSISDPIIQLIASFALAFVLYAASFPDIMETL 278
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA-VSLD 182
+ +S++ ++ P++ + +F++G A + LF + + EK D + L
Sbjct: 279 TAGKITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFSILDMEQ---EKDDGKLELK 335
Query: 183 HINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPL 242
NGD++F N++F Y L ++++I AG+ VAL+G SG GKST+A LL R YD
Sbjct: 336 KANGDIEFRNVTFCYPTKELPALQNISMYIPAGKIVALVGRSGSGKSTIANLLTRFYDVN 395
Query: 243 SGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTAR 302
G I +D HD++ +L SLR V LVSQ++ LF+ TVA NI Y + E +E A
Sbjct: 396 EGNIFLDGHDLREYKLSSLRGQVALVSQNVHLFNDTVANNIAYAS-ENRYSREEIEKAAE 454
Query: 303 TANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRS 362
A A +F+R L G +T IG G LSGGQRQR+AIARAL ++S VLILDEATSALD+ S
Sbjct: 455 MAYAMDFIRKLDNGLDTMIGENGVLLSGGQRQRIAIARALLRDSPVLILDEATSALDTES 514
Query: 363 ELLVRQAVDRLLGHHT 378
E ++ A+D L + T
Sbjct: 515 ERAIQAALDELQKNRT 530
>sp|Q8XXB6|MSBA_RALSO Lipid A export ATP-binding/permease protein MsbA OS=Ralstonia
solanacearum (strain GMI1000) GN=msbA PE=3 SV=1
Length = 592
Score = 214 bits (545), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 214/377 (56%), Gaps = 20/377 (5%)
Query: 12 LSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYL-NEVLPAILFVKANNAEMC 70
L+L+ A+++P + +++ + RLR ++++ H ++ + +AY+ E VK + E
Sbjct: 174 LTLVVAVILPVIGFLMSRINRRLRSLNRE-HQNLTNEAAYVVEEAAGGYKVVKLHGGEAY 232
Query: 71 ESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLL------VSGGSFD 124
ES RF + + ++ L Q + AL ++ +++ + G F
Sbjct: 233 ESRRFNAMTNRLRGYAMRMAVAGGLNQPVTQFLAALALSVILAIAMVQAQANQTTVGGFT 292
Query: 125 GCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVS-LDH 183
G F+ +++ +I P++ + ++G A E +F L IE D +D
Sbjct: 293 G-----FVMAMLLLISPLKHLTDVNQPMQRGLTAAEFIFGLI---DTPIEPQDGGKHIDR 344
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GD++F +++F+Y + LD ++LH++AGE VAL+GPSG GK+TL LL R ++P S
Sbjct: 345 ARGDLRFEHVTFRYGPDGRAALDSIDLHVKAGEIVALVGPSGSGKTTLVNLLPRFFEPTS 404
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY--RDLMTKIDMERVEHTA 301
G I++D + ++ L LRR + VSQD+ LF+ T+A N+ Y RD ++IDM RV
Sbjct: 405 GRIVLDGDALADLSLQDLRRQIAFVSQDVVLFNDTIAANVAYGARD-ASEIDMARVRRAL 463
Query: 302 RTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSR 361
A + V LP G +T+IG GS LSGGQRQRLAIARA+Y+++ +LILDEATSALDS
Sbjct: 464 EAAYLTDVVDNLPDGVDTNIGDNGSKLSGGQRQRLAIARAVYKDAPILILDEATSALDSE 523
Query: 362 SELLVRQAVDRLLGHHT 378
SE V+ A++ L+ T
Sbjct: 524 SERQVQAALEALMQGRT 540
>sp|Q5RKI8|ABCB8_RAT ATP-binding cassette sub-family B member 8, mitochondrial OS=Rattus
norvegicus GN=Abcb8 PE=2 SV=1
Length = 714
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 215/384 (55%), Gaps = 20/384 (5%)
Query: 7 VISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKANN 66
++SP L+L+ A+V P++ V +G LRK+S+Q IA + +E L ++ V+A
Sbjct: 271 ILSPRLTLMLAVVTPALMGVGTLMGSGLRKLSRQCQEQIARATGVADEALGSVRTVRAFA 330
Query: 67 AEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYF-----GALFILCGGSLLVSGG 121
E E R++ S C+ + + AL Q + I F G LFI GGSL V+G
Sbjct: 331 MEKREEERYQAELESCCCKAEELGRGIALF-QGLSNIAFNCMVLGTLFI--GGSL-VAGQ 386
Query: 122 SFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSL 181
G L+SF+ + + + + + + +G A R+F+ S VI S+
Sbjct: 387 QLKGGDLMSFLVASQTVQRSMASLSVLFGQVVRGLSAGARVFEYMSL-SPVIPLTGGYSI 445
Query: 182 --DHINGDVKFCNISFKYADNMPL-VLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRL 238
+ G + F N+SF Y VL L + G+ VAL+G SGGGK+T+A LL R
Sbjct: 446 PSKDLRGSITFQNVSFSYPCRPGFNVLKNFTLKLPPGKIVALVGQSGGGKTTVASLLERF 505
Query: 239 YDPLSGCILVDDHDVQNIRLDSLRRHV-GLVSQDITLFSGTVAENIGYRDLMTKIDM--E 295
YDP +G + +D HD++ + LR V G +SQ+ LF+ T+ ENI + K+D E
Sbjct: 506 YDPTAGVVTLDGHDLRTLDPSWLRGQVIGFISQEPVLFATTIMENIRF----GKLDASDE 561
Query: 296 RVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEAT 355
V AR ANA EF+ + P GY+T +G RG++LSGGQ+QRLAIARAL + +VLILDEAT
Sbjct: 562 EVYTAARKANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALIKRPTVLILDEAT 621
Query: 356 SALDSRSELLVRQAVDRLLGHHTV 379
SALD+ SE +V++A+DR TV
Sbjct: 622 SALDAESERIVQEALDRASAGRTV 645
>sp|Q3J7R8|MSBA_NITOC Lipid A export ATP-binding/permease protein MsbA OS=Nitrosococcus
oceani (strain ATCC 19707 / NCIMB 11848) GN=msbA PE=3
SV=1
Length = 597
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 219/386 (56%), Gaps = 26/386 (6%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M ++ +L+LI + P +AL+I ++ R R+IS++ S+ +S E + VK
Sbjct: 161 MAYLNGLLTLIILVTAPLIALIIWWVSHRFRRISRKIQNSMGDVSQVAQETIEGHREVKI 220
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYF----GALFILCGGSLL--V 118
+ E+ RF ++ + + +K A+ VQLI G + + S+L +
Sbjct: 221 FGGQTYEAERFDQVNEQNRRQTMKMAATDAISQPVVQLIAVLGLAGVIHLATRESMLAQI 280
Query: 119 SGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA 178
S G+F +SFIT+++ ++ P++ + K ++G A + +F L + E P+A
Sbjct: 281 SVGTF-----ISFITAMMLLLGPVKRLTKINGTLQRGIAAAQSIFGL------LAETPEA 329
Query: 179 ----VSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKL 234
SL G ++F ++SF Y VL+ ++L I+ +T+AL+G SG GKSTL L
Sbjct: 330 DRGQQSLRRARGAIRFEHLSFCYEPAKGPVLENIDLEIKPYQTIALVGHSGSGKSTLVSL 389
Query: 235 LLRLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM--TKI 292
L R Y+ SG IL+D+ D+Q +RL LRR + LVSQ I LF+ T+A NI Y +K
Sbjct: 390 LARFYETTSGRILIDEMDIQTLRLTELRRQIALVSQQIILFNDTIAHNIAYGSYQQTSKQ 449
Query: 293 DMERVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILD 352
D+ R A A+A EF+ LP G +T IG +G LSGGQRQRLAIARAL +++ +LILD
Sbjct: 450 DIIR---AAEAAHAMEFINRLPDGLDTVIGEKGVLLSGGQRQRLAIARALLKDAPILILD 506
Query: 353 EATSALDSRSELLVRQAVDRLLGHHT 378
EAT++LD+ +E ++ A++ L+ T
Sbjct: 507 EATASLDTEAERHIQAALETLMRQRT 532
>sp|Q9PEE7|MSBA_XYLFA Lipid A export ATP-binding/permease protein MsbA OS=Xylella
fastidiosa (strain 9a5c) GN=msbA PE=3 SV=1
Length = 589
Score = 212 bits (540), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 208/384 (54%), Gaps = 22/384 (5%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
ML S ++L LV P +A V+ + +R R+IS S A L ++ L VK
Sbjct: 164 MLWYSWTVTLAILLVAPLLAWVMQRVAKRYRRISHHIQESNAQLMQAADQALSNYQDVKV 223
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSG---- 120
A+ E R+ RLA+ +L +K ++L VQL+ L +L LL++G
Sbjct: 224 YAAQESELERYARLANINLGLAIKVESTRSLSSAAVQLLGAVGLAML----LLIAGHEAL 279
Query: 121 -GSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAV 179
G VS +TS++ +I ++ + N + G + +RLF V++ PD +
Sbjct: 280 AGRLSPGDFVSLMTSMIAVIPALKQLTNVQNMLQSGIASAQRLF-------SVLDSPDEL 332
Query: 180 S-----LDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKL 234
L G ++F I+ +Y VLD ++ G A++G SG GKS+L KL
Sbjct: 333 DTGRRPLGRARGFIEFRGITARYPGRSAPVLDSVSFVAAPGTVTAIVGRSGSGKSSLIKL 392
Query: 235 LLRLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDM 294
+ R Y+P SG IL+D H +Q+ L LRR + LV Q + LF G++AENI Y + M ++
Sbjct: 393 IPRFYEPESGQILLDGHPLQDYLLADLRRQIALVGQQVMLFDGSIAENIAYGE-MRQVVS 451
Query: 295 ERVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEA 354
E +E ANA +FV LP+G +G +G LSGGQRQRLAIARA+ +++ +LILDEA
Sbjct: 452 EEIERVVVDANAQDFVNQLPEGLQFQVGVKGGRLSGGQRQRLAIARAMLKDAPILILDEA 511
Query: 355 TSALDSRSELLVRQAVDRLLGHHT 378
T+ALD+ SE LV+ A+ RL+ T
Sbjct: 512 TAALDNESERLVQDALQRLMPERT 535
>sp|Q7NZU6|MSBA_CHRVO Lipid A export ATP-binding/permease protein MsbA OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=msbA PE=3 SV=1
Length = 584
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/378 (37%), Positives = 208/378 (55%), Gaps = 9/378 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
ML L+LI +V+P++ + +G+RLR +++Q+ +A ++ L E + +K
Sbjct: 159 MLTTDWQLTLICLVVMPAVTYCMRLVGQRLRGLARQNQQHMAQMTQVLAESIQCQRAIKV 218
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALF-ILCGGSLLVSGGSF 123
+ E ARF A S +K+ A QL+ AL IL L G
Sbjct: 219 YGGQEREMARFDHTATSVRRNQVKQSAASAANTGVTQLMIACALAAILYFAGLRAQHGGL 278
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVS-LD 182
+ F+T+++ + P++ + ++G A E +F F + E D S L
Sbjct: 279 TAGDFMVFLTAMLGLFAPVKRISSVSQAMQRGLAAAESVF---AFIDEPGEPDDGASALP 335
Query: 183 HINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPL 242
G + F +SF Y + L ++L I+ GETVAL+G SG GK+TLA L+ R Y+P
Sbjct: 336 ATRGRLSFDAVSFAYPNVDSPALSGIDLEIQPGETVALVGSSGSGKTTLASLVPRFYEPS 395
Query: 243 SGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY-RDLMTKIDMERVEHTA 301
+G +L+D + +I L LR H+ LVSQ + LF+ TVA NI Y R+ ++ E + A
Sbjct: 396 AGRLLLDGVPLADIPLRQLRGHIALVSQQVELFNDTVAANIAYGREDASR---EEIVEAA 452
Query: 302 RTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSR 361
R ANA EF+ LP G T IG G+ LSGGQRQRLAIARAL +N+ +LILDEATSALD++
Sbjct: 453 RAANAMEFIEGLPDGLETVIGENGARLSGGQRQRLAIARALLKNAPLLILDEATSALDTQ 512
Query: 362 SELLVRQAVDRLLGHHTV 379
SE LV+ A++ L+ + T
Sbjct: 513 SERLVQAALENLMKNRTT 530
>sp|Q3KJ31|MSBA_PSEPF Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
fluorescens (strain Pf0-1) GN=msbA PE=3 SV=1
Length = 600
Score = 212 bits (539), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 213/374 (56%), Gaps = 4/374 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
+L ++ L+L+ ++P +A+++ ++ RK SK+ L++ ++ +E + V++
Sbjct: 174 LLFMNWKLTLVMVAILPLIAVMVRTASKKFRKQSKKIQLAMGDVTHVASETIQGYRVVRS 233
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSGGSFD 124
E E RF + + + L+ + A+ +QL+ + A+ IL L + G +
Sbjct: 234 FGGEAYEEKRFLDASQGNTDKQLRMTRTGAIYTPLLQLVIYSAMAILMFLVLYLRGDASA 293
Query: 125 GCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHI 184
G +V++IT + +PI+ + + + ++G E +F+ + +V V D +
Sbjct: 294 G-DMVAYITLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEPEV--DTGTVERDSV 350
Query: 185 NGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSG 244
+G + N+SF Y VLD ++ + G+ VAL+G SG GKSTLA L+ R Y G
Sbjct: 351 SGRLDVRNLSFTYPGTERQVLDDISFSVEPGQMVALVGRSGSGKSTLANLIPRFYHHDKG 410
Query: 245 CILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTARTA 304
IL+D +V+ +L +LRRH+ V+Q +TLFS TVA NI Y DL E +E AR A
Sbjct: 411 EILIDGVEVEQYKLLNLRRHIAQVTQHVTLFSDTVANNIAYGDL-AGAPREDIEKAARDA 469
Query: 305 NADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSEL 364
A +F+ LP+G +T +G G LSGGQRQRLAIARAL +N+ +LILDEATSALD+ SE
Sbjct: 470 YAMDFIAQLPEGLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESER 529
Query: 365 LVRQAVDRLLGHHT 378
++ A+D+++ T
Sbjct: 530 HIQAALDQVMKGRT 543
>sp|P55469|Y4GM_RHISN Uncharacterized ABC transporter ATP-binding protein y4gM
OS=Rhizobium sp. (strain NGR234) GN=NGR_a03510 PE=3 SV=1
Length = 586
Score = 211 bits (538), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 206/385 (53%), Gaps = 24/385 (6%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M++ P+LSL+SA V P L + L ++RKI + SI + + E I VKA
Sbjct: 162 MVIQQPLLSLVSAAVGPGAILGVRVLTRKVRKIMELEIASIGQIIQSVQETSTGIRIVKA 221
Query: 65 NNAEMCESARFRRLAHSDLCELLKK-----RKMKALIPQTVQLIYFG-ALFILCGGSLLV 118
E RR + ++ ++ R A P L F A I G L++
Sbjct: 222 FALEDF----MRRRMDKYIGDVERRANSIARLEAASSPIMETLSGFAIAGVIALSGVLVL 277
Query: 119 SGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA 178
G+ G L+SFIT+L+ EP + + + + + ++ L ++ EK A
Sbjct: 278 QQGNTPG-ELMSFITALLLAYEPAKRLARMRISLESALVGVRMMYQLADHPIELTEKNSA 336
Query: 179 VSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRL 238
+ L G+++F +++F Y + L LN+ AG+T AL+GPSG GKS++ L++RL
Sbjct: 337 IPLPEGPGEIRFKDVNFSYKNGERL-FQNLNVTFPAGKTTALVGPSGAGKSSIINLIMRL 395
Query: 239 YDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENI-----GYRDLMTKID 293
YDP G + VD HD++++ SLR +G V QD LFSGT+ NI G D
Sbjct: 396 YDPDVGSVTVDGHDLKDVTFRSLRDRIGFVGQDTFLFSGTIKYNISLGREGASD------ 449
Query: 294 MERVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDE 353
E + A+TANA +F+ +P GY+T +G G LSGGQ+QR+ IARA+ +N+ +LI DE
Sbjct: 450 -EEIIEAAKTANAHDFIMKMPHGYDTEVGENGIKLSGGQKQRITIARAMLRNAEILIFDE 508
Query: 354 ATSALDSRSELLVRQAVDRLLGHHT 378
ATSALDS SE+ +RQA+ RL T
Sbjct: 509 ATSALDSESEIQIRQALARLTRKRT 533
>sp|Q9CXJ4|ABCB8_MOUSE ATP-binding cassette sub-family B member 8, mitochondrial OS=Mus
musculus GN=Abcb8 PE=2 SV=1
Length = 717
Score = 211 bits (536), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 215/384 (55%), Gaps = 20/384 (5%)
Query: 7 VISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKANN 66
++SP L+L+ A+V P++ V +G LRK+S+Q IA + +E L + V+A
Sbjct: 271 MLSPRLTLMLAVVTPALMGVGTLMGSGLRKLSRQCQEQIARATGVADEALGNVRTVRAFA 330
Query: 67 AEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYF-----GALFILCGGSLLVSGG 121
E E R++ S C+ + + AL Q + I F G LFI GGSL V+G
Sbjct: 331 MEKREEERYQAELESCCCKAEELGRGIALF-QGLSNIAFNCMVLGTLFI--GGSL-VAGQ 386
Query: 122 SFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSL 181
G L+SF+ + + + + + + +G A R+F+ S VI +
Sbjct: 387 QLKGGDLMSFLVASQTVQRSMASLSVLFGQVVRGLSAGARVFEYMAL-SPVIPLTGGYCI 445
Query: 182 DH--INGDVKFCNISFKYADNMPL-VLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRL 238
+ I G + F N++F Y VL L + +G+ VAL+G SGGGK+T+A LL R
Sbjct: 446 PNKDIRGSITFQNVTFSYPCRPGFNVLKDFTLKLPSGKIVALVGQSGGGKTTVASLLERF 505
Query: 239 YDPLSGCILVDDHDVQNIRLDSLRRHV-GLVSQDITLFSGTVAENIGYRDLMTKIDM--E 295
YDP +G + +D HD++ + LR V G +SQ+ LF+ T+ ENI + K+D E
Sbjct: 506 YDPEAGSVTLDGHDLRTLNPSWLRGQVIGFISQEPVLFATTIMENIRF----GKLDASDE 561
Query: 296 RVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEAT 355
V AR ANA EF+ + P GY+T +G RG++LSGGQ+QRLAIARAL + +VLILDEAT
Sbjct: 562 EVYTAAREANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALIKQPTVLILDEAT 621
Query: 356 SALDSRSELLVRQAVDRLLGHHTV 379
SALD+ SE +V++A+DR TV
Sbjct: 622 SALDAESERVVQEALDRASAGRTV 645
>sp|Q4KJB2|MSBA_PSEF5 Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=msbA PE=3
SV=1
Length = 601
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 213/374 (56%), Gaps = 4/374 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
+L ++ L+L+ ++P +A+++ ++ RK SK+ +++ ++ +E + V++
Sbjct: 174 LLWMNWRLTLVMIAILPLIAVMVRTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRS 233
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSGGSFD 124
E E RF + + + L+ + A+ +QL+ + A+ +L L + G +
Sbjct: 234 FGGETYEQQRFLAASQGNTDKQLRMTRTGAIYTPLLQLVIYSAMAVLMFLVLYLRGDASA 293
Query: 125 GCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHI 184
G +V++IT + +PI+ + + + ++G E +F+ + +V V I
Sbjct: 294 G-EMVAYITMAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEPEV--DRGTVERASI 350
Query: 185 NGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSG 244
NG ++ N+SF Y VLD ++ I G+ VAL+G SG GKSTLA L+ R Y G
Sbjct: 351 NGHLEVRNLSFTYPGTERQVLDDISFSIEPGKMVALVGRSGSGKSTLANLIPRFYHHDKG 410
Query: 245 CILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTARTA 304
IL+D +V++ RL +LRRH+ V+Q +TLFS TVA NI Y DL E +E A A
Sbjct: 411 QILLDGTEVEDFRLLNLRRHIAQVTQHVTLFSDTVANNIAYGDL-AGAPREDIEKAAADA 469
Query: 305 NADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSEL 364
A +F+ LP+G +T +G G LSGGQRQRLAIARAL +N+ +LILDEATSALD+ SE
Sbjct: 470 YAMDFIAQLPEGLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESER 529
Query: 365 LVRQAVDRLLGHHT 378
++ A+D+++ T
Sbjct: 530 HIQAALDKVMKGRT 543
>sp|Q080T2|MSBA_SHEFN Lipid A export ATP-binding/permease protein MsbA OS=Shewanella
frigidimarina (strain NCIMB 400) GN=msbA PE=3 SV=1
Length = 600
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 210/378 (55%), Gaps = 9/378 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSL ++ P M +VI+ + +R RK+SKQ ++ ++A +++ V
Sbjct: 177 MFYYSWKLSLCILVIGPIMGVVISVVSKRFRKVSKQIQSAMGGVTATTEQMIKGHKNVLV 236
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLI-YFGALFILCGGSLLVSGGSF 123
+ E RF ++ + + +K +++ + +I F F+L +
Sbjct: 237 FGGQKTEVERFFQVNDRNRYQNMKLAVAQSISQPLIMVIGSFALAFVLYAATWDSMKTDL 296
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPD--AVSL 181
+ + + +++ M++PI+ + + EF++G A +F+L +PD S+
Sbjct: 297 TAGTFAAILGAMLAMLQPIKNLTRVNAEFQRGIAACTTVFELLD----TAPEPDNGVFSI 352
Query: 182 DHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
D + G + F N++F Y L+ +N ++ G+TVAL+G SG GKST+A L+ R Y
Sbjct: 353 DRVEGKLAFDNVTFAYPGQEKSALNGINFEVKPGKTVALVGRSGSGKSTIASLITRFYGD 412
Query: 242 LS-GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
LS G I +DD + + +L SLR V LVSQ +TLF+ T+A NI Y ++ E++ H
Sbjct: 413 LSTGDIRLDDTSIYDYQLKSLRNQVALVSQQVTLFNDTIANNIAYA-YPGEVTREQIVHA 471
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A A A EF+ TLP+G +T +G G LSGGQRQR+AIARA+ +++ VLILDEATSALD+
Sbjct: 472 AELAYAMEFIDTLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDT 531
Query: 361 RSELLVRQAVDRLLGHHT 378
SE +++ +D L + T
Sbjct: 532 ESEKAIQKGLDNLRHNRT 549
>sp|P45861|YWJA_BACSU Uncharacterized ABC transporter ATP-binding protein YwjA
OS=Bacillus subtilis (strain 168) GN=ywjA PE=3 SV=1
Length = 575
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 201/373 (53%), Gaps = 10/373 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
ML I+ L+L++ +++P + + Y +++ K + I SA + + I V+A
Sbjct: 149 MLFINWQLALLTFIIMPIVIWLALYFNKKMTKAFTTLNKDIGDFSARVENNIGGIRLVQA 208
Query: 65 NNAEMCESARF----RRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSG 120
E E RF +R + L K ++ + L F LF+L G+ V
Sbjct: 209 FGNEAFEKERFAVNNQRFRVTKLSSYKIMAKNGSI---SYMLTRFVTLFVLLCGTWFVIR 265
Query: 121 GSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVS 180
GS V+F+ + PI + + +G + +L + + + + PD+
Sbjct: 266 GSLSYGEFVAFVLLTNVLFRPIDKINAIIEMYPRGIAGFKSYMELMETEPDIQDSPDSKD 325
Query: 181 LDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYD 240
+ + G++++ ++SF Y D+ VL+ +NL I+AGETVA +GPSG GKSTL LL R Y+
Sbjct: 326 VSGLKGNIRYKHVSFGYDDHHN-VLNDINLSIQAGETVAFVGPSGAGKSTLCSLLPRFYE 384
Query: 241 PLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
G I +D ++++ L SLR +G+V QD+ LFSGT+ ENI Y L E +
Sbjct: 385 ASEGDITIDGISIKDMTLSSLRGQIGVVQQDVFLFSGTLRENIAYGRLGAS--EEDIWQA 442
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
+ A+ +E V +P G +T IG RG LSGGQ+QRL+IAR +N S+LILDEATSALD+
Sbjct: 443 VKQAHLEELVHNMPDGLDTMIGERGVKLSGGQKQRLSIARMFLKNPSILILDEATSALDT 502
Query: 361 RSELLVRQAVDRL 373
+E +++A+ L
Sbjct: 503 ETEAAIQKALQEL 515
>sp|Q87EF0|MSBA_XYLFT Lipid A export ATP-binding/permease protein MsbA OS=Xylella
fastidiosa (strain Temecula1 / ATCC 700964) GN=msbA PE=3
SV=1
Length = 589
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 208/384 (54%), Gaps = 22/384 (5%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
ML S ++L LV P +A V+ + +R R+IS S A L ++ L VK
Sbjct: 164 MLWYSWTVTLAILLVAPLLAWVMQRVAKRYRRISHHIQESNAQLMQAADQALSNYQDVKV 223
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSG---- 120
A+ E R+ RLA+ +L +K +++ VQL+ L +L LL++G
Sbjct: 224 YAAQESELERYARLANINLGLAVKVESTRSISSAAVQLLGAVGLAML----LLIAGHEAL 279
Query: 121 -GSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAV 179
G VS +TS++ +I ++ + N + G + +RLF V++ PD +
Sbjct: 280 AGRLSPGDFVSLMTSMIAVIPALKQLTNVQNMLQSGIASAQRLF-------SVLDSPDEL 332
Query: 180 S-----LDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKL 234
L G ++F I+ +Y VLD ++ G A++G SG GKS+L KL
Sbjct: 333 DTGRRPLGRARGLIEFRGITARYPGRSAPVLDSVSFVAAPGTVTAIVGRSGSGKSSLIKL 392
Query: 235 LLRLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDM 294
+ R Y+P SG IL+D H +Q+ L LRR + LV Q + LF G++A+NI Y + M ++
Sbjct: 393 IPRFYEPESGQILLDGHPLQDYLLADLRRQIALVGQQVMLFDGSIADNIAYGE-MRQVVS 451
Query: 295 ERVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEA 354
E +E ANA +FV LP+G +G +G LSGGQRQRLAIARA+ +++ +LILDEA
Sbjct: 452 EEIERVVVDANAQDFVNQLPEGLQFQVGVKGGRLSGGQRQRLAIARAMLKDAPILILDEA 511
Query: 355 TSALDSRSELLVRQAVDRLLGHHT 378
T+ALD+ SE LV+ A+ RL+ T
Sbjct: 512 TAALDNESERLVQDALQRLMPERT 535
>sp|Q8EDF0|MSBA_SHEON Lipid A export ATP-binding/permease protein MsbA OS=Shewanella
oneidensis (strain MR-1) GN=msbA PE=3 SV=1
Length = 601
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 210/378 (55%), Gaps = 9/378 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSL ++ P M +VI + R RK+SKQ ++ +SA +++ V A
Sbjct: 178 MFYNSWKLSLCILVIGPIMGVVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLA 237
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLI-YFGALFILCGGSLLVSGGSF 123
+ E+ARF ++ + + +K +A+ + +I F F+L SL
Sbjct: 238 FGGQETETARFAKINDRNRHQNMKLAVAQAVSQPLIMVIGSFALAFVLYAASLDSMKADL 297
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA--VSL 181
+ + + +++ M++PI+ + + EF++G A +F+L + + D ++
Sbjct: 298 TAGTFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLD----TVPESDTGTYTV 353
Query: 182 DHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
G+++F N+SF Y L++++ + G+T+AL+G SG GKST+A L+ R Y
Sbjct: 354 ARAKGNLRFDNVSFSYEGQERRALEKIDFEVSQGQTLALVGRSGSGKSTIASLVTRFYTG 413
Query: 242 L-SGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
L SG IL+DD + + L SLR V LVSQ +TLF+ T+A NI Y ++ E++
Sbjct: 414 LESGDILLDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYA-YPGEVTREQIIEA 472
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A A+A EF+ LP G +T +G G LSGGQRQR+AIARA+ +++ VLILDEATSALD+
Sbjct: 473 ATLAHAMEFIEQLPDGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDT 532
Query: 361 RSELLVRQAVDRLLGHHT 378
SE ++Q +D L + T
Sbjct: 533 ESEKAIQQGLDNLRQNRT 550
>sp|Q0HTS8|MSBA_SHESR Lipid A export ATP-binding/permease protein MsbA OS=Shewanella sp.
(strain MR-7) GN=msbA PE=3 SV=1
Length = 601
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 209/378 (55%), Gaps = 9/378 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSL ++ P M LVI + R RK+SKQ ++ +SA +++ V A
Sbjct: 178 MFYNSWKLSLCILVIGPIMGLVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLA 237
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLI-YFGALFILCGGSLLVSGGSF 123
+ E+ARF ++ + + +K +A+ + +I F F+L SL
Sbjct: 238 FGGQETETARFAKINDRNRHQNMKLAVAQAVSQPLIMVIGSFALAFVLYAASLDSMKADL 297
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA--VSL 181
+ + + +++ M++PI+ + + EF++G A +F+L + + D ++
Sbjct: 298 TAGTFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLD----TLPESDTGTYTV 353
Query: 182 DHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
G+++F N+SF Y LD+++ + G+T+AL+G SG GKST+A L+ R Y
Sbjct: 354 KRAKGNLRFDNVSFSYEGQERRALDKIDFEVTQGQTLALVGRSGSGKSTIASLVTRFYTG 413
Query: 242 L-SGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
L SG I +DD + + L SLR V LVSQ +TLF+ T+A NI Y + E++
Sbjct: 414 LESGDIKLDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYA-YPGEATREQIIQA 472
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A A+A EF+ LP+G +T +G G LSGGQRQR+AIARA+ +++ VLILDEATSALD+
Sbjct: 473 ATLAHAMEFIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDT 532
Query: 361 RSELLVRQAVDRLLGHHT 378
SE ++Q +D L + T
Sbjct: 533 ESEKAIQQGLDNLRQNRT 550
>sp|Q0HHH4|MSBA_SHESM Lipid A export ATP-binding/permease protein MsbA OS=Shewanella sp.
(strain MR-4) GN=msbA PE=3 SV=1
Length = 601
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 209/378 (55%), Gaps = 9/378 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSL ++ P M LVI + R RK+SKQ ++ +SA +++ V A
Sbjct: 178 MFYNSWKLSLCILVIGPIMGLVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLA 237
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLI-YFGALFILCGGSLLVSGGSF 123
+ E+ARF ++ + + +K +A+ + +I F F+L SL
Sbjct: 238 FGGQETETARFAKINDRNRHQNMKLAVAQAVSQPLIMVIGSFALAFVLYAASLDSMKADL 297
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA--VSL 181
+ + + +++ M++PI+ + + EF++G A +F+L + + D ++
Sbjct: 298 TAGTFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLD----TLPESDTGTYTV 353
Query: 182 DHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
G+++F N+SF Y LD+++ + G+T+AL+G SG GKST+A L+ R Y
Sbjct: 354 KRAKGNLRFDNVSFSYEGQERRALDKIDFEVTQGQTLALVGRSGSGKSTIASLVTRFYTG 413
Query: 242 L-SGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
L SG I +DD + + L SLR V LVSQ +TLF+ T+A NI Y + E++
Sbjct: 414 LESGDIKLDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYA-YPGEATREQIIQA 472
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A A+A EF+ LP+G +T +G G LSGGQRQR+AIARA+ +++ VLILDEATSALD+
Sbjct: 473 ATLAHAMEFIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDT 532
Query: 361 RSELLVRQAVDRLLGHHT 378
SE ++Q +D L + T
Sbjct: 533 ESEKAIQQGLDNLRQNRT 550
>sp|Q5PGH0|MSBA_SALPA Lipid A export ATP-binding/permease protein MsbA OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=msbA PE=3
SV=1
Length = 582
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 206/375 (54%), Gaps = 4/375 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LS+I ++ P +++ I + +R R ISK ++ ++ ++L V
Sbjct: 160 MFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLI 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGAL-FILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI AL F+L S S
Sbjct: 220 FGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSL 279
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
++ +S++ ++ P++ + +F++G A + LF + + + E + D
Sbjct: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVI--DR 337
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GD++F N++F Y L +NL I AG+TVAL+G SG GKST+A L+ R YD
Sbjct: 338 ATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 397
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G IL+D HD++ L SLR V LVSQ++ LF+ TVA NI Y + E++E AR
Sbjct: 398 GHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYAR-TEEYSREQIEEAARM 456
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ + G +T IG G LSGGQRQR+AIARAL ++S +LILDEATSALD+ SE
Sbjct: 457 AYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESE 516
Query: 364 LLVRQAVDRLLGHHT 378
++ A+D L + T
Sbjct: 517 RAIQAALDELQKNRT 531
>sp|P63359|MSBA_SALTY Lipid A export ATP-binding/permease protein MsbA OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=msbA PE=1 SV=1
Length = 582
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 206/375 (54%), Gaps = 4/375 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LS+I ++ P +++ I + +R R ISK ++ ++ ++L V
Sbjct: 160 MFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLI 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGAL-FILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI AL F+L S S
Sbjct: 220 FGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSL 279
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
++ +S++ ++ P++ + +F++G A + LF + + + E + D
Sbjct: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVI--DR 337
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GD++F N++F Y L +NL I AG+TVAL+G SG GKST+A L+ R YD
Sbjct: 338 ATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 397
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G IL+D HD++ L SLR V LVSQ++ LF+ TVA NI Y + E++E AR
Sbjct: 398 GHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYAR-TEEYSREQIEEAARM 456
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ + G +T IG G LSGGQRQR+AIARAL ++S +LILDEATSALD+ SE
Sbjct: 457 AYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESE 516
Query: 364 LLVRQAVDRLLGHHT 378
++ A+D L + T
Sbjct: 517 RAIQAALDELQKNRT 531
>sp|P63360|MSBA_SALTI Lipid A export ATP-binding/permease protein MsbA OS=Salmonella
typhi GN=msbA PE=3 SV=1
Length = 582
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 206/375 (54%), Gaps = 4/375 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LS+I ++ P +++ I + +R R ISK ++ ++ ++L V
Sbjct: 160 MFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLI 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGAL-FILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI AL F+L S S
Sbjct: 220 FGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSL 279
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
++ +S++ ++ P++ + +F++G A + LF + + + E + D
Sbjct: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVI--DR 337
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GD++F N++F Y L +NL I AG+TVAL+G SG GKST+A L+ R YD
Sbjct: 338 ATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 397
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G IL+D HD++ L SLR V LVSQ++ LF+ TVA NI Y + E++E AR
Sbjct: 398 GHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYAR-TEEYSREQIEEAARM 456
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ + G +T IG G LSGGQRQR+AIARAL ++S +LILDEATSALD+ SE
Sbjct: 457 AYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESE 516
Query: 364 LLVRQAVDRLLGHHT 378
++ A+D L + T
Sbjct: 517 RAIQAALDELQKNRT 531
>sp|Q57R14|MSBA_SALCH Lipid A export ATP-binding/permease protein MsbA OS=Salmonella
choleraesuis (strain SC-B67) GN=msbA PE=3 SV=1
Length = 582
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 206/375 (54%), Gaps = 4/375 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LS+I ++ P +++ I + +R R ISK ++ ++ ++L V
Sbjct: 160 MFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLI 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGAL-FILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI AL F+L S S
Sbjct: 220 FGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSL 279
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
++ +S++ ++ P++ + +F++G A + LF + + + E + D
Sbjct: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVI--DR 337
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GD++F N++F Y L +NL I AG+TVAL+G SG GKST+A L+ R YD
Sbjct: 338 ATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 397
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G IL+D HD++ L SLR V LVSQ++ LF+ TVA NI Y + E++E AR
Sbjct: 398 GHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYAR-TEEYSREQIEEAARM 456
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ + G +T IG G LSGGQRQR+AIARAL ++S +LILDEATSALD+ SE
Sbjct: 457 AYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESE 516
Query: 364 LLVRQAVDRLLGHHT 378
++ A+D L + T
Sbjct: 517 RAIQAALDELQKNRT 531
>sp|Q4QPI4|MSBA_HAEI8 Lipid A export ATP-binding/permease protein MsbA OS=Haemophilus
influenzae (strain 86-028NP) GN=msbA PE=3 SV=1
Length = 587
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 216/383 (56%), Gaps = 17/383 (4%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S L+L+ ++ P +A++I + + RK+SK S+ L+A ++L V +
Sbjct: 164 MFYTSWELTLVLFVIGPIIAVLITIVSKIFRKLSKNLQDSMGELTATTEQMLKGHKVVIS 223
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQT-----VQLIYFGALF--ILCGGSLL 117
+ E RF +++++ ++++ MK + + VQ+I AL + + L
Sbjct: 224 FGGQFVEEERFNKVSNN-----MRRKGMKMVTADSISDPVVQIIASLALVAVLFLATTPL 278
Query: 118 VSGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPD 177
++ + S +S++ M+ P++ + ++F++G A + LF + + EK +
Sbjct: 279 IAEDNLSAGSFTVVFSSMLAMMRPLKSLTNVNSQFQRGMAACQTLFAILDLEP---EKDN 335
Query: 178 AV-SLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLL 236
+ G ++F N+SF Y L L+ ++ + AG+TVAL+G SG GKST+A L+
Sbjct: 336 GTYKAEPAKGALEFKNVSFAYQGKEELALNNISFSVPAGKTVALVGRSGSGKSTIANLVT 395
Query: 237 RLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMER 296
R YD G IL+D ++Q+ RL +LR + +VSQ + LF+ T+A NI Y K E
Sbjct: 396 RFYDIEQGEILLDGVNIQDYRLSNLRENCAVVSQQVHLFNDTIANNIAYAA-QDKYSREE 454
Query: 297 VEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATS 356
+ A+ A A EF+ LPQG++T IG G+SLSGGQRQRLAIARAL +NS VLILDEATS
Sbjct: 455 IIAAAKAAYALEFIEKLPQGFDTVIGENGASLSGGQRQRLAIARALLRNSPVLILDEATS 514
Query: 357 ALDSRSELLVRQAVDRLLGHHTV 379
ALD+ SE ++ A+D L TV
Sbjct: 515 ALDTESERAIQSALDELKKDRTV 537
>sp|Q54W24|ABCB4_DICDI ABC transporter B family member 4 OS=Dictyostelium discoideum
GN=abcB4 PE=3 SV=1
Length = 767
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 205/377 (54%), Gaps = 7/377 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
+++ISP LSL ++P+M V + L+ +S +S + A + E + I V+A
Sbjct: 341 LILISPKLSLGMMTILPTMVSVGTFYAGWLKSLSVRSQRAQAQSTIVAEEAIGNIRTVQA 400
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGA--LFILCGGSLLVSGGS 122
+ + ES RF L L + ++ I Q V + + L + G LVS G
Sbjct: 401 FSNQHYESERFIEKNQHSLA-LSTESGVQIGIFQGVTSLALNSVSLLVYWYGGTLVSRGE 459
Query: 123 FDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLD 182
G L SFI + M + + + ++R+ +L + +I L
Sbjct: 460 MTGGQLTSFIIHTMNMQSSFSQLSILFTQIMSAMGGMQRITELIN-RVPLINSNQGFKLR 518
Query: 183 HINGDVKFCNISFKYADNMPL-VLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
+ G++KF N+ FKY + VL+ LNL ++ G+ VAL G SGGGKST+A LL R YD
Sbjct: 519 ELKGEIKFINVDFKYPTRPHVHVLNGLNLTLKPGQVVALAGSSGGGKSTIAGLLERFYDI 578
Query: 242 LSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTA 301
+G I +D + ++ + LR +G+VSQ+ +LF+ T+ EN+ Y + D + A
Sbjct: 579 SNGDITIDGYSIKQLNAKWLRSRIGIVSQEPSLFATTILENLRYGNPNATED--EIIEAA 636
Query: 302 RTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSR 361
+ ANA +F+ P+GY T +G RG LSGGQ+QR+AIARA+ +N ++ILDEATSALDS+
Sbjct: 637 KLANAHQFISNFPKGYETIVGERGVQLSGGQKQRIAIARAILKNPQIIILDEATSALDSQ 696
Query: 362 SELLVRQAVDRLLGHHT 378
SELLV+ A+D L+ T
Sbjct: 697 SELLVQTALDNLMKGRT 713
>sp|Q1RDU4|MSBA_ECOUT Lipid A export ATP-binding/permease protein MsbA OS=Escherichia
coli (strain UTI89 / UPEC) GN=msbA PE=3 SV=1
Length = 582
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 206/375 (54%), Gaps = 4/375 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LS+I ++ P +++ I + +R R ISK ++ ++ ++L V
Sbjct: 160 MFYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLI 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGAL-FILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI AL F+L S S
Sbjct: 220 FGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSL 279
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
++ +S++ ++ P++ + +F++G A + LF + + + E + +
Sbjct: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVI--ER 337
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GDV+F N++F Y L +NL I AG+TVAL+G SG GKST+A L+ R YD
Sbjct: 338 ATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 397
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G IL+D HD++ L SLR V LVSQ++ LF+ TVA NI Y + E++E AR
Sbjct: 398 GEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYAR-TEQYSREQIEEAARM 456
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ + G +T IG G LSGGQRQR+AIARAL ++S +LILDEATSALD+ SE
Sbjct: 457 AYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESE 516
Query: 364 LLVRQAVDRLLGHHT 378
++ A+D L + T
Sbjct: 517 RAIQAALDELQKNRT 531
>sp|Q8FJB1|MSBA_ECOL6 Lipid A export ATP-binding/permease protein MsbA OS=Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=msbA
PE=3 SV=1
Length = 582
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 206/375 (54%), Gaps = 4/375 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LS+I ++ P +++ I + +R R ISK ++ ++ ++L V
Sbjct: 160 MFYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLI 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGAL-FILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI AL F+L S S
Sbjct: 220 FGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSL 279
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
++ +S++ ++ P++ + +F++G A + LF + + + E + +
Sbjct: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVI--ER 337
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GDV+F N++F Y L +NL I AG+TVAL+G SG GKST+A L+ R YD
Sbjct: 338 ATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 397
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G IL+D HD++ L SLR V LVSQ++ LF+ TVA NI Y + E++E AR
Sbjct: 398 GEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYAR-TEQYSREQIEEAARM 456
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ + G +T IG G LSGGQRQR+AIARAL ++S +LILDEATSALD+ SE
Sbjct: 457 AYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESE 516
Query: 364 LLVRQAVDRLLGHHT 378
++ A+D L + T
Sbjct: 517 RAIQAALDELQKNRT 531
>sp|Q0TJD9|MSBA_ECOL5 Lipid A export ATP-binding/permease protein MsbA OS=Escherichia
coli O6:K15:H31 (strain 536 / UPEC) GN=msbA PE=3 SV=1
Length = 582
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 206/375 (54%), Gaps = 4/375 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LS+I ++ P +++ I + +R R ISK ++ ++ ++L V
Sbjct: 160 MFYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLI 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGAL-FILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI AL F+L S S
Sbjct: 220 FGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSL 279
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
++ +S++ ++ P++ + +F++G A + LF + + + E + +
Sbjct: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVI--ER 337
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GDV+F N++F Y L +NL I AG+TVAL+G SG GKST+A L+ R YD
Sbjct: 338 ATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 397
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G IL+D HD++ L SLR V LVSQ++ LF+ TVA NI Y + E++E AR
Sbjct: 398 GEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYAR-TEQYSREQIEEAARM 456
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ + G +T IG G LSGGQRQR+AIARAL ++S +LILDEATSALD+ SE
Sbjct: 457 AYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESE 516
Query: 364 LLVRQAVDRLLGHHT 378
++ A+D L + T
Sbjct: 517 RAIQAALDELQKNRT 531
>sp|Q32E34|MSBA_SHIDS Lipid A export ATP-binding/permease protein MsbA OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=msbA PE=3 SV=1
Length = 582
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 206/375 (54%), Gaps = 4/375 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LS+I ++ P +++ I + +R R ISK ++ ++ ++L V
Sbjct: 160 MFYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLI 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGAL-FILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI AL F+L S S
Sbjct: 220 FGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSL 279
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
++ +S++ ++ P++ + +F++G A + LF + + + E + +
Sbjct: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVI--ER 337
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GDV+F N++F Y L +NL I AG+TVAL+G SG GKST+A L+ R YD
Sbjct: 338 ATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 397
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G IL+D HD++ L SLR V LVSQ++ LF+ TVA NI Y + E++E AR
Sbjct: 398 GEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYAR-TEQYSREQIEEAARM 456
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ + G +T IG G LSGGQRQR+AIARAL ++S +LILDEATSALD+ SE
Sbjct: 457 AYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESE 516
Query: 364 LLVRQAVDRLLGHHT 378
++ A+D L + T
Sbjct: 517 RAIQAALDELQKNRT 531
>sp|Q31YT6|MSBA_SHIBS Lipid A export ATP-binding/permease protein MsbA OS=Shigella boydii
serotype 4 (strain Sb227) GN=msbA PE=3 SV=1
Length = 582
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 206/375 (54%), Gaps = 4/375 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LS+I ++ P +++ I + +R R ISK ++ ++ ++L V
Sbjct: 160 MFYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLI 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGAL-FILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI AL F+L S S
Sbjct: 220 FGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSL 279
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
++ +S++ ++ P++ + +F++G A + LF + + + E + +
Sbjct: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVI--ER 337
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GDV+F N++F Y L +NL I AG+TVAL+G SG GKST+A L+ R YD
Sbjct: 338 ATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 397
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G IL+D HD++ L SLR V LVSQ++ LF+ TVA NI Y + E++E AR
Sbjct: 398 GEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYAR-TEQYSREQIEEAARM 456
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ + G +T IG G LSGGQRQR+AIARAL ++S +LILDEATSALD+ SE
Sbjct: 457 AYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESE 516
Query: 364 LLVRQAVDRLLGHHT 378
++ A+D L + T
Sbjct: 517 RAIQAALDELQKNRT 531
>sp|P60752|MSBA_ECOLI Lipid A export ATP-binding/permease protein MsbA OS=Escherichia
coli (strain K12) GN=msbA PE=1 SV=1
Length = 582
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 206/375 (54%), Gaps = 4/375 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LS+I ++ P +++ I + +R R ISK ++ ++ ++L V
Sbjct: 160 MFYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLI 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGAL-FILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI AL F+L S S
Sbjct: 220 FGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSL 279
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
++ +S++ ++ P++ + +F++G A + LF + + + E + +
Sbjct: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVI--ER 337
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GDV+F N++F Y L +NL I AG+TVAL+G SG GKST+A L+ R YD
Sbjct: 338 ATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 397
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G IL+D HD++ L SLR V LVSQ++ LF+ TVA NI Y + E++E AR
Sbjct: 398 GEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYAR-TEQYSREQIEEAARM 456
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ + G +T IG G LSGGQRQR+AIARAL ++S +LILDEATSALD+ SE
Sbjct: 457 AYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESE 516
Query: 364 LLVRQAVDRLLGHHT 378
++ A+D L + T
Sbjct: 517 RAIQAALDELQKNRT 531
>sp|P60753|MSBA_ECO57 Lipid A export ATP-binding/permease protein MsbA OS=Escherichia
coli O157:H7 GN=msbA PE=3 SV=1
Length = 582
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 206/375 (54%), Gaps = 4/375 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LS+I ++ P +++ I + +R R ISK ++ ++ ++L V
Sbjct: 160 MFYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLI 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGAL-FILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI AL F+L S S
Sbjct: 220 FGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSL 279
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
++ +S++ ++ P++ + +F++G A + LF + + + E + +
Sbjct: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVI--ER 337
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GDV+F N++F Y L +NL I AG+TVAL+G SG GKST+A L+ R YD
Sbjct: 338 ATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 397
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G IL+D HD++ L SLR V LVSQ++ LF+ TVA NI Y + E++E AR
Sbjct: 398 GEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYAR-TEQYSREQIEEAARM 456
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ + G +T IG G LSGGQRQR+AIARAL ++S +LILDEATSALD+ SE
Sbjct: 457 AYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESE 516
Query: 364 LLVRQAVDRLLGHHT 378
++ A+D L + T
Sbjct: 517 RAIQAALDELQKNRT 531
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,907,113
Number of Sequences: 539616
Number of extensions: 5303721
Number of successful extensions: 33357
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3742
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 23914
Number of HSP's gapped (non-prelim): 5154
length of query: 382
length of database: 191,569,459
effective HSP length: 119
effective length of query: 263
effective length of database: 127,355,155
effective search space: 33494405765
effective search space used: 33494405765
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)