Query 016801
Match_columns 382
No_of_seqs 197 out of 1732
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 02:56:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016801.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016801hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0165 ArgH Argininosuccinate 100.0 8.1E-91 1.8E-95 695.0 34.5 323 59-381 3-325 (459)
2 KOG1316 Argininosuccinate lyas 100.0 8.4E-88 1.8E-92 639.9 27.0 324 59-382 6-329 (464)
3 PLN02646 argininosuccinate lya 100.0 8.1E-85 1.8E-89 668.7 33.0 323 59-381 16-338 (474)
4 PRK00855 argininosuccinate lya 100.0 3E-80 6.5E-85 634.6 35.3 323 59-381 4-326 (459)
5 TIGR00838 argH argininosuccina 100.0 8.9E-80 1.9E-84 630.7 34.6 321 61-381 1-322 (455)
6 PRK12425 fumarate hydratase; P 100.0 3.8E-78 8.3E-83 617.5 33.3 328 46-380 2-362 (464)
7 PRK04833 argininosuccinate lya 100.0 7.6E-78 1.6E-82 615.5 34.8 322 60-381 2-324 (455)
8 PRK06389 argininosuccinate lya 100.0 3E-77 6.4E-82 601.7 32.1 313 60-381 2-317 (434)
9 PRK13353 aspartate ammonia-lya 100.0 3E-76 6.4E-81 605.7 34.0 330 44-380 3-364 (473)
10 PRK12273 aspA aspartate ammoni 100.0 5.7E-76 1.2E-80 603.4 34.2 330 45-381 4-367 (472)
11 PRK06705 argininosuccinate lya 100.0 3.8E-76 8.2E-81 608.4 32.3 320 60-381 10-331 (502)
12 cd01357 Aspartase Aspartase. T 100.0 2.5E-75 5.3E-80 595.9 33.6 327 47-380 1-359 (450)
13 PRK00485 fumC fumarate hydrata 100.0 4E-75 8.7E-80 596.7 33.9 326 46-378 4-362 (464)
14 PRK14515 aspartate ammonia-lya 100.0 4.1E-75 9E-80 595.8 33.7 330 42-379 7-368 (479)
15 PRK12308 bifunctional arginino 100.0 1.1E-74 2.4E-79 612.7 35.0 322 60-381 2-324 (614)
16 PLN00134 fumarate hydratase; P 100.0 1.2E-73 2.7E-78 583.9 34.3 319 51-376 2-352 (458)
17 TIGR00979 fumC_II fumarate hyd 100.0 1.8E-73 3.9E-78 582.6 33.3 323 47-376 2-357 (458)
18 cd01334 Lyase_I Lyase class I 100.0 1.5E-73 3.4E-78 562.0 30.2 294 88-381 1-297 (325)
19 cd01359 Argininosuccinate_lyas 100.0 2.5E-73 5.4E-78 580.6 32.8 301 81-381 2-302 (435)
20 cd01362 Fumarase_classII Class 100.0 1.9E-71 4.1E-76 567.7 33.4 327 47-380 1-360 (455)
21 TIGR00839 aspA aspartate ammon 100.0 4.2E-71 9E-76 565.8 33.4 323 47-376 1-358 (468)
22 cd01596 Aspartase_like asparta 100.0 4.1E-70 8.8E-75 556.9 33.4 323 50-379 7-358 (450)
23 COG0114 FumC Fumarase [Energy 100.0 3.9E-70 8.5E-75 529.2 28.5 318 45-369 2-352 (462)
24 COG1027 AspA Aspartate ammonia 100.0 8.2E-70 1.8E-74 525.5 28.8 322 44-372 2-357 (471)
25 PRK02186 argininosuccinate lya 100.0 1.9E-69 4E-74 593.8 34.6 311 70-381 418-732 (887)
26 cd01595 Adenylsuccinate_lyase_ 100.0 3.2E-70 7E-75 548.9 24.3 293 81-381 4-304 (381)
27 cd01360 Adenylsuccinate_lyase_ 100.0 8.8E-69 1.9E-73 539.2 28.1 290 83-381 12-303 (387)
28 TIGR02426 protocat_pcaB 3-carb 100.0 1.5E-68 3.3E-73 528.5 28.0 288 81-379 14-308 (338)
29 cd01597 pCLME prokaryotic 3-ca 100.0 3.1E-68 6.6E-73 543.3 27.7 288 82-378 15-310 (437)
30 PF00206 Lyase_1: Lyase; Inte 100.0 1.9E-68 4.1E-73 523.1 20.6 294 65-358 2-312 (312)
31 PRK08470 adenylosuccinate lyas 100.0 1.8E-67 3.9E-72 537.2 28.6 285 83-380 15-305 (442)
32 PRK07492 adenylosuccinate lyas 100.0 1E-66 2.2E-71 530.1 28.9 289 83-380 15-308 (435)
33 TIGR00928 purB adenylosuccinat 100.0 1.2E-66 2.5E-71 531.3 27.8 288 83-380 15-311 (435)
34 PRK08540 adenylosuccinate lyas 100.0 1E-66 2.2E-71 533.5 26.4 291 82-381 19-318 (449)
35 PRK05975 3-carboxy-cis,cis-muc 100.0 4.7E-66 1E-70 512.5 27.7 300 59-379 8-315 (351)
36 PRK07380 adenylosuccinate lyas 100.0 2.6E-65 5.5E-70 519.4 31.0 287 83-380 15-305 (431)
37 PRK09053 3-carboxy-cis,cis-muc 100.0 2E-65 4.3E-70 524.2 29.1 282 81-378 20-319 (452)
38 PRK06390 adenylosuccinate lyas 100.0 1.2E-65 2.6E-70 525.5 26.1 293 82-381 19-318 (451)
39 COG0015 PurB Adenylosuccinate 100.0 1.7E-62 3.8E-67 492.1 29.6 281 84-379 16-311 (438)
40 cd03302 Adenylsuccinate_lyase_ 100.0 4.8E-62 1E-66 496.8 26.1 287 84-378 16-315 (436)
41 KOG1317 Fumarase [Energy produ 100.0 1.3E-59 2.7E-64 444.5 19.3 318 44-369 26-377 (487)
42 PRK09285 adenylosuccinate lyas 100.0 1.2E-58 2.6E-63 472.9 27.7 297 60-380 10-339 (456)
43 cd01598 PurB PurB_like adenylo 100.0 1.1E-58 2.4E-63 468.9 25.4 286 81-380 4-317 (425)
44 PLN02848 adenylosuccinate lyas 100.0 4.5E-56 9.8E-61 453.6 27.9 284 83-380 31-342 (458)
45 cd01594 Lyase_I_like Lyase cla 100.0 5.1E-39 1.1E-43 300.5 23.5 175 159-380 36-211 (231)
46 KOG2700 Adenylosuccinate lyase 100.0 2.3E-34 5E-39 283.0 18.4 272 94-378 38-328 (481)
47 PRK08937 adenylosuccinate lyas 99.8 1.1E-19 2.3E-24 169.3 8.4 81 298-381 22-103 (216)
48 KOG2700 Adenylosuccinate lyase 93.2 1.6 3.5E-05 44.8 12.7 162 159-355 182-351 (481)
49 PF10925 DUF2680: Protein of u 86.7 4.2 9.1E-05 30.2 7.0 47 86-132 11-57 (59)
50 PF11348 DUF3150: Protein of u 34.7 97 0.0021 29.8 6.0 47 82-128 45-98 (257)
51 KOG4797 Transcriptional regula 33.3 1.2E+02 0.0026 25.4 5.3 38 167-204 54-91 (123)
52 CHL00180 rbcR LysR transcripti 25.4 1.7E+02 0.0036 27.9 6.0 50 203-253 46-95 (305)
53 TIGR02890 spore_yteA sporulati 21.4 5.8E+02 0.013 22.7 9.1 42 226-269 60-101 (159)
54 PF14735 HAUS4: HAUS augmin-li 20.9 4.1E+02 0.0088 25.3 7.4 85 145-248 45-130 (238)
No 1
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-91 Score=695.01 Aligned_cols=323 Identities=59% Similarity=0.892 Sum_probs=319.4
Q ss_pred cccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCC
Q 016801 59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDR 138 (382)
Q Consensus 59 ~~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~ 138 (382)
.++|||||++++++.+..|+.|+.+|++++++++.+.+||+++|.+.|+|+++++++|+++|.+|.+++..++|.+++..
T Consensus 3 ~~lwggRf~~~~~~~~~~~~~Si~~D~~l~~~di~~s~AH~~mL~~~Gii~~ee~~~I~~~L~~l~~e~~~g~~~~~~~~ 82 (459)
T COG0165 3 NKLWGGRFSGGPDPLVKEFNASISFDKRLAEYDIAGSIAHAKMLAKQGIITEEEAAKILEGLEELLEEIRAGKFELDPDD 82 (459)
T ss_pred CCCCCCCccCCCcHHHHHHhccchhHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCCccCCCcc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999888889999999
Q ss_pred cchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccc
Q 016801 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (382)
Q Consensus 139 ~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~ 218 (382)
||+|+++|++|.+++|+.||++|+||||||+|.|+++||+|+.+..|...+..|+++|+++|++|.+++||||||+|+||
T Consensus 83 EDvH~aiE~~L~~~iG~~ggkLhtgRSRNDQVatd~rL~lr~~~~~l~~~i~~l~~aL~~~Ae~~~~~imPGyTHlQ~AQ 162 (459)
T COG0165 83 EDVHTAIEARLIERIGDVGGKLHTGRSRNDQVATDLRLWLRDKLLELLELIRILQKALLDLAEEHAETVMPGYTHLQRAQ 162 (459)
T ss_pred ccHHHHHHHHHHHHHhhhhchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccCCcccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHH
Q 016801 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298 (382)
Q Consensus 219 P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~ 298 (382)
|+|||||+.+|+++|.||++||.+++++++.+|||+||++||++++||+++|++|||+.+..|+++++++||+++|++++
T Consensus 163 Pvtf~H~llay~~~l~RD~~Rl~d~~~rvn~sPLGagAlaGt~~~iDR~~tA~lLGF~~~~~Nsldavs~Rdf~le~l~~ 242 (459)
T COG0165 163 PVTFAHHLLAYAEMLARDIERLRDALKRVNVSPLGAGALAGTPFPIDRERTAELLGFDAVTRNSLDAVSDRDFILEFLSA 242 (459)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccCCCCCCCCHHHHHHHcCCchhhcCchhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 299 l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
+++++++|||||+||++|+|.|||+|++||++++|||||||||||+.+|++|+++++|.|+..++++.+||+|++||||+
T Consensus 243 ~s~~~~~LSRlaedlI~wss~EfgfI~l~D~~sTGSSIMPQKKNPD~~ELiRgk~grv~G~l~~ll~~~k~lPlaYnrDl 322 (459)
T COG0165 243 AALIMVHLSRLAEDLILWSSPEFGFIELPDEFSTGSSIMPQKKNPDVLELIRGKAGRVIGALTGLLTIMKGLPLAYNRDL 322 (459)
T ss_pred HHHHHHHHHHHHHHHHHHccccCceEeCCcccccccccCCCCCCCcHHHHHHHhhhhhHHHHHHHHHHHhcCcccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC
Q 016801 379 QTG 381 (382)
Q Consensus 379 qe~ 381 (382)
||+
T Consensus 323 Qed 325 (459)
T COG0165 323 QED 325 (459)
T ss_pred Hhh
Confidence 997
No 2
>KOG1316 consensus Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-88 Score=639.91 Aligned_cols=324 Identities=56% Similarity=0.843 Sum_probs=320.8
Q ss_pred cccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCC
Q 016801 59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDR 138 (382)
Q Consensus 59 ~~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~ 138 (382)
.++|||||+++++|.++.|+.|++||++++++++.+.+|+|+++++.|+|++++.+.|.+++++|..++..+.|.+.|+.
T Consensus 6 ~KlWGGRFtg~~dp~m~~fn~Si~ydk~ly~~Dv~gSkaya~~L~~~glit~~e~dkil~gLe~i~~ew~~~kf~~~p~d 85 (464)
T KOG1316|consen 6 QKLWGGRFTGAVDPLMEKFNASIPYDKRLYEADVDGSKAYAKALEKAGLITEAELDKILKGLEKIRREWAAGKFKLNPND 85 (464)
T ss_pred hhhhccccCCCCCHHHHHhhccCccchHHHHhhhhhhHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHhcCceEeCCCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccc
Q 016801 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (382)
Q Consensus 139 ~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~ 218 (382)
||+|++||++|.|++|+.++++|+||||||+|.|.++||+|+.++.++..+..|+++++++|+.+.|++||||||+|.||
T Consensus 86 EDvHtanErrL~eliG~~agKlHTgRSRNDQV~TDlRLw~r~~i~~~~~~l~~L~~~~v~rAe~~~dvlmpGYTHLQRAQ 165 (464)
T KOG1316|consen 86 EDVHTANERRLTELIGEIAGKLHTGRSRNDQVVTDLRLWLRDAIDTILGLLWNLIRVLVDRAEAELDVLMPGYTHLQRAQ 165 (464)
T ss_pred hhhhhHHHHHHHHHHhhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCeeccChhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHH
Q 016801 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298 (382)
Q Consensus 219 P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~ 298 (382)
|+.|.||+..++..|.||..||.+++.|++.+|||+||+||++++|||+++++.|||..+..|++++++.||+++||+++
T Consensus 166 pvrwsH~LlSha~~l~~D~~Rl~q~~~R~n~~PLGagALAGnpl~iDR~~la~~LgF~~v~~NSm~AvsDRDFVvef~fw 245 (464)
T KOG1316|consen 166 PVRWSHWLLSHAEQLTRDLGRLVQIRKRLNQLPLGAGALAGNPLGIDREFLAEELGFEGVIMNSMDAVSDRDFVVEFLFW 245 (464)
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHhccCCcccchhcCCCCCccHHHHHHhcCCcccchhhhhccccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 299 l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
.++++.+|||+|+|+++|++.|||+|.++|++.+|||+||||+||+.+|++|+++++|+|..+++++.+||+|++||||+
T Consensus 246 ~sm~m~HlSRlaEdlIiy~t~EF~Fv~lSDaySTGSSlMPQKKNpDslELlRgksgrV~gdl~g~lmt~KG~PstYnkDl 325 (464)
T KOG1316|consen 246 ASMVMTHLSRLAEDLIIYSTKEFGFVTLSDAYSTGSSLMPQKKNPDSLELLRGKSGRVFGDLTGLLMTLKGLPSTYNKDL 325 (464)
T ss_pred HHHHHHHHHHHhhHhheeeccccCceeeccccccCcccCCCCCCCCHHHHhccccceehhhhHHHHHHhcCCccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCC
Q 016801 379 QTGR 382 (382)
Q Consensus 379 qe~~ 382 (382)
|||.
T Consensus 326 QeDK 329 (464)
T KOG1316|consen 326 QEDK 329 (464)
T ss_pred hhhh
Confidence 9983
No 3
>PLN02646 argininosuccinate lyase
Probab=100.00 E-value=8.1e-85 Score=668.71 Aligned_cols=323 Identities=83% Similarity=1.265 Sum_probs=316.4
Q ss_pred cccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCC
Q 016801 59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDR 138 (382)
Q Consensus 59 ~~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~ 138 (382)
+++|++||++++++.+..|+.++.+|++++++++.+.+||++||.+.|+||++++++|.++|++|..+...++|+++++.
T Consensus 16 ~~~w~~r~~~~~~~~~~~~~~s~~~d~~l~~~di~~~~Aha~~L~~~Gii~~~~a~~I~~al~~i~~~~~~~~f~~~~~~ 95 (474)
T PLN02646 16 KKLWGGRFEEGVTPAVEKFNESISFDKRLYKEDIMGSKAHASMLAKQGIITDEDRDSILDGLDEIEKEIEAGKFEWRPDR 95 (474)
T ss_pred hhhhcCCCCCCccHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCCcCCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999988777899999988
Q ss_pred cchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccc
Q 016801 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (382)
Q Consensus 139 ~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~ 218 (382)
||+|+++|+++.+++|+.|+|+|+|+||||+++|+++|++|+.+..|.+.|.+|+++|.++|++|+|++||||||+|+||
T Consensus 96 ed~h~~iE~~L~e~~G~~g~~lH~grSrND~v~Ta~~L~lr~~l~~l~~~L~~L~~~L~~~A~~~~dtvmpGrTHlQ~Aq 175 (474)
T PLN02646 96 EDVHMNNEARLTELIGEPAKKLHTARSRNDQVATDTRLWCRDAIDVIRKRIKTLQVALVELAEKNVDLVVPGYTHLQRAQ 175 (474)
T ss_pred CchHHHHHHHHHHHhchhhCcccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEecccCCccce
Confidence 99999999999999998889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHH
Q 016801 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298 (382)
Q Consensus 219 P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~ 298 (382)
||||||||++|+++|.|+++||.+++++++.+||||||++||++++|++++|++|||..+..|+++++++||++++++++
T Consensus 176 PiT~G~~l~~~~~~l~rd~~RL~~~~~r~~~~pLGgga~aGt~~~idr~~~A~~LGf~~~~~n~~da~~~RD~~~e~~~~ 255 (474)
T PLN02646 176 PVLLSHWLLSHVEQLERDAGRLVDCRPRVNFCPLGSCALAGTGLPIDRFMTAKDLGFTAPMRNSIDAVSDRDFVLEFLFA 255 (474)
T ss_pred eecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhcCCCCCCCHHHHHHHhCCCCCCCChHHHHhccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 299 l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
++.++++|+|||+||++|+++||||+.+|+++++|||||||||||+.+|.++++|++|+|+..++++.++|+|++||||+
T Consensus 256 la~ia~~LsRia~Dl~l~ss~e~g~v~~~d~~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 335 (474)
T PLN02646 256 NSITAIHLSRLGEEWVLWASEEFGFVTPSDAVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTVLALCKGLPTAYNRDL 335 (474)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeeeeCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHhhhHHHHHHhcCCchHhhcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC
Q 016801 379 QTG 381 (382)
Q Consensus 379 qe~ 381 (382)
|++
T Consensus 336 q~~ 338 (474)
T PLN02646 336 QED 338 (474)
T ss_pred hhH
Confidence 986
No 4
>PRK00855 argininosuccinate lyase; Provisional
Probab=100.00 E-value=3e-80 Score=634.64 Aligned_cols=323 Identities=61% Similarity=0.915 Sum_probs=315.1
Q ss_pred cccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCC
Q 016801 59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDR 138 (382)
Q Consensus 59 ~~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~ 138 (382)
+++||+|++++|++.+.+|..++.+|++++++++.+++||+.+|.+.|+||++++++|.++|+++..+...++|++++.+
T Consensus 4 ~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~Aha~~l~~~G~l~~~~a~~i~~al~~i~~~~~~~~~~~~~~~ 83 (459)
T PRK00855 4 NKLWGGRFSEGPDELVERFTASISFDKRLAEEDIAGSIAHARMLAKQGILSEEEAEKILAGLDEILEEIEAGKFEFSPEL 83 (459)
T ss_pred ccccccCCCcchHHHHHHcccCccchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhcccCCcccCCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999988777899998889
Q ss_pred cchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccc
Q 016801 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (382)
Q Consensus 139 ~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~ 218 (382)
+|+|+++|+++.+++|+.++|||+|+||||+++|+++|++|+.+..|.+.|.+|+++|.++|++|++++||||||+||||
T Consensus 84 ~d~~~~ie~~l~~~~g~~g~~iH~g~SrnD~~~Ta~~L~~r~~l~~l~~~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~ 163 (459)
T PRK00855 84 EDIHMAIEARLTERIGDVGGKLHTGRSRNDQVATDLRLYLRDEIDEIAELLLELQKALLDLAEEHADTIMPGYTHLQRAQ 163 (459)
T ss_pred CcHHHHHHHHHHHHhccccCcccCCCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEeecCcCCccce
Confidence 99999999999999998789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHH
Q 016801 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298 (382)
Q Consensus 219 P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~ 298 (382)
|+|||||+++|+++|.|+++||.+++++++.+||||++++||++++|+++++++|||..+..|+++|+++||++++++++
T Consensus 164 P~T~G~~l~~~~~~L~r~~~rL~~~~~~~~~~plGgaag~gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~e~~~~ 243 (459)
T PRK00855 164 PVTFGHHLLAYAEMLARDLERLRDARKRVNRSPLGSAALAGTTFPIDRERTAELLGFDGVTENSLDAVSDRDFALEFLSA 243 (459)
T ss_pred eecHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhcCCCCCcCHHHHHHHcCCCCCCCCHHHHHHccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 299 l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
++.++++|+|||+||++|+++||||+.+|+++++||||||||+||+.+|.++++|.+++|+..+++..++++|++||||+
T Consensus 244 l~~la~~L~ria~Dl~l~ss~e~gei~~p~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rD~ 323 (459)
T PRK00855 244 ASLLMVHLSRLAEELILWSSQEFGFVELPDAFSTGSSIMPQKKNPDVAELIRGKTGRVYGNLTGLLTVMKGLPLAYNRDL 323 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCCeEeCCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHhcCchHHhhhhh
Confidence 99999999999999999999999999999888899999999999999999999999999999999999999999999999
Q ss_pred ccC
Q 016801 379 QTG 381 (382)
Q Consensus 379 qe~ 381 (382)
|+.
T Consensus 324 ~~~ 326 (459)
T PRK00855 324 QED 326 (459)
T ss_pred hhh
Confidence 974
No 5
>TIGR00838 argH argininosuccinate lyase. This model describes argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens.
Probab=100.00 E-value=8.9e-80 Score=630.74 Aligned_cols=321 Identities=53% Similarity=0.833 Sum_probs=312.4
Q ss_pred cccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCCcc
Q 016801 61 LWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDRED 140 (382)
Q Consensus 61 lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~~d 140 (382)
+|++||++++++.+..|..++.+|++++++++.+++||++|+.+.|+||++++++|.++|+++..+...++|++++..||
T Consensus 1 ~~~~r~~~~~~~~~~~~~~~~~~d~~l~~~~i~~~~Ah~~~L~~~G~l~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~d 80 (455)
T TIGR00838 1 LWGGRFTGGMDPRVAKFNASLSFDKELAEYDIEGSIAHTKMLKKAGILTEEEAAKIIEGLNELKEEGREGPFILDPDDED 80 (455)
T ss_pred CCCccCCCCccHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCcCCCCCcCc
Confidence 69999998889989999989999999999999999999999999999999999999999999998877778988888899
Q ss_pred hhHHHHHHHHHHhC-CCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccc
Q 016801 141 VHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQP 219 (382)
Q Consensus 141 v~~a~e~~l~e~~G-~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P 219 (382)
+|+++|+++.+++| +.|+|+|+|+||||+++|+++|++|+.+..|.+.|..|+++|.++|++|+|++||||||+|||||
T Consensus 81 ~~~~ie~~l~e~~g~~~g~~iH~g~SrnD~~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P 160 (455)
T TIGR00838 81 IHMAIERELIDRVGEDLGGKLHTGRSRNDQVATDLRLYLRDHVLELAEALLDLQDALIELAEKHVETLMPGYTHLQRAQP 160 (455)
T ss_pred HHHHHHHHHHHHhCCCccCCccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEeeccccccccee
Confidence 99999999999999 88899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHHH
Q 016801 220 VLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSAN 299 (382)
Q Consensus 220 ~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l 299 (382)
|||||||++|+++|.|+++||.+++++++.+|||||+++||++++|++++++.|||..+..|+++|+++||+++++++++
T Consensus 161 ~T~G~~~~~~~~~L~r~~~rL~~~~~~~~~~plGg~a~aGt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~e~~~~l 240 (455)
T TIGR00838 161 ITLAHHLLAYAEMLLRDYERLQDALKRVNVSPLGSGALAGTGFPIDREYLAELLGFDAVTENSLDAVSDRDFILELLFVA 240 (455)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhcccCCCCCCCHHHHHHHcCCCCCcCCHHHHHhCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhc
Q 016801 300 SIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQ 379 (382)
Q Consensus 300 ~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~q 379 (382)
+.++++|+|||+||++|+++|||||.+|+.+++||||||||+||+.+|.++++|.++.|+..+++.+++++|++||||+|
T Consensus 241 ~~~a~~L~ria~Dl~l~ss~e~gei~lp~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rd~~ 320 (455)
T TIGR00838 241 ALIMVHLSRFAEDLILWSTGEFGFVELPDEFSSGSSIMPQKKNPDVAELIRGKTGRVQGNLTGMLMTLKALPLAYNRDLQ 320 (455)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCccCCCCCCcCChHHHHHHHHHHHHhhhHHHHHHHHhcCChHhhhhhH
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred cC
Q 016801 380 TG 381 (382)
Q Consensus 380 e~ 381 (382)
+.
T Consensus 321 ~~ 322 (455)
T TIGR00838 321 ED 322 (455)
T ss_pred hh
Confidence 74
No 6
>PRK12425 fumarate hydratase; Provisional
Probab=100.00 E-value=3.8e-78 Score=617.52 Aligned_cols=328 Identities=20% Similarity=0.261 Sum_probs=303.7
Q ss_pred chhhhccc---cCccccccccCCCCcchHHHHHhcccc-ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 016801 46 HKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLD 121 (382)
Q Consensus 46 ~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~ 121 (382)
+|+|+|.+ ++|. +.|||.+ |.|++++|+.+ ..+++.+|+++..+++|||+||.++|+|+++++++|.++|+
T Consensus 2 ~r~e~d~~g~~~~p~-~~~~g~~----t~ra~~nf~~~~~~~~~~~i~a~~~ik~Aha~~l~~~G~l~~~~~~~I~~al~ 76 (464)
T PRK12425 2 SRTETDSLGPIEVPE-DAYWGAQ----TQRSLINFAIGKERMPLAVLHALALIKKAAARVNDRNGDLPADIARLIEQAAD 76 (464)
T ss_pred CCcCcccCCCCCCcc-cccchHH----HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 45666655 8898 8999998 99999999977 67779999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCcc---cccC-CcchhHHH----HHHHHHHhC-CCCce--------eccCCChhhHHHHHHHHHHHHHH-H
Q 016801 122 EIERQIEAGKFM---WRTD-REDVHMNI----EAALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRDAI-D 183 (382)
Q Consensus 122 ~i~~~~~~~~f~---~~~~-~~dv~~a~----e~~l~e~~G-~~g~~--------lH~G~SsnDi~~Ta~~L~lr~~l-~ 183 (382)
+|..+...++|+ ++++ +||+||++ ++++.+++| +.|++ ||+||||||+++|+++|++|+.+ .
T Consensus 77 ei~~~~~~~~f~~~~~~~g~~ed~~mnvnevi~~~~~e~~G~~~g~~~~vhpn~~vh~g~S~ND~~~Ta~~L~~r~~l~~ 156 (464)
T PRK12425 77 EVLDGQHDDQFPLVVWQTGSGTQSNMNVNEVIAGRANELAGNGRGGKSPVHPNDHVNRSQSSNDCFPTAMHIAAAQAVHE 156 (464)
T ss_pred HHHcCcccCCCCccCCCCCCcchHHHHHHHHHHHHHHHHhCcccccccccCchhcccCCCChhhHHHHHHHHHHHHHHHH
Confidence 999988888998 5555 89999987 678888898 57777 99999999999999999999999 5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCC
Q 016801 184 TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLP 263 (382)
Q Consensus 184 ~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~ 263 (382)
.|.+.|.+|+++|.+||++|++++||||||+||||||||||||++|+++|.||++||++++++++.+|+||||+ ||+++
T Consensus 157 ~l~~~L~~l~~~L~~~A~~~~~tim~GrTHlQ~A~PiT~G~~~~a~~~~l~rd~~RL~~~~~r~~~~plGggAv-GT~~~ 235 (464)
T PRK12425 157 QLLPAIAELSGGLAEQSARHAKLVKTGRTHMMDATPITFGQELSAFVAQLDYAERAIRAALPAVCELAQGGTAV-GTGLN 235 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeecccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchh-cCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred CChH-------HHHHHcCCCCC-CCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c--cceeecCCCCCC
Q 016801 264 IDRF-------MTAEALEFTAP-MRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE-E--FGFITPSDSVST 332 (382)
Q Consensus 264 ~~~~-------~la~~LG~~~~-~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~-e--~gev~l~~~~~~ 332 (382)
+|+. .+++.|||+.+ .+|.++++++||+++|++++++.++++|+|||+||++|+|+ + |||+.+|+ .++
T Consensus 236 ~~~~~~~~~~~~La~~LG~~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llsS~p~~g~~ei~lp~-~~~ 314 (464)
T PRK12425 236 APHGFAEAIAAELAALSGLPFVTAPNKFAALAGHEPLVSLSGALKTLAVALMKIANDLRLLGSGPRAGLAEVRLPA-NEP 314 (464)
T ss_pred CCccHHHHHHHHHHHHhCCCCcccccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCceEEECCC-CCC
Confidence 9752 35788899984 78999999999999999999999999999999999999987 4 89999984 599
Q ss_pred CCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 333 GSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 333 GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
||||||||+||+.+|.++++|++|+|++.+++.++++.++.+|+|.+.
T Consensus 315 GSSiMPqK~NP~~~E~i~~~a~~v~G~~~~v~~~~~~~~~q~n~~~~~ 362 (464)
T PRK12425 315 GSSIMPGKVNPTQCEALSMLACQVMGNDATIGFAASQGHLQLNVFKPV 362 (464)
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhhcchH
Confidence 999999999999999999999999999999999999988888887653
No 7
>PRK04833 argininosuccinate lyase; Provisional
Probab=100.00 E-value=7.6e-78 Score=615.48 Aligned_cols=322 Identities=47% Similarity=0.784 Sum_probs=307.0
Q ss_pred ccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcC-CcccccCC
Q 016801 60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAG-KFMWRTDR 138 (382)
Q Consensus 60 ~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~-~f~~~~~~ 138 (382)
.+|+++|+.++++.+..|..+..+|..+.++++.+.+||+++++++|+||++++++|.++|+++..+...+ .+.++++.
T Consensus 2 ~~~~~r~~~~~~~~~~~~~~~~~~d~~l~~~~i~~~~Aha~~l~e~Gii~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~ 81 (455)
T PRK04833 2 ALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTADEQQQLEEALNELLEEVRANPQQILASDA 81 (455)
T ss_pred cCcccccCCcchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhhhcCCcccCCCCC
Confidence 58999999877888889999999999999999999999999999999999999999999999997654222 45566778
Q ss_pred cchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccc
Q 016801 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (382)
Q Consensus 139 ~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~ 218 (382)
+|+|..+|+++.+++|+.|+|+|+|+||||+++|+++|++|+.+..+.+.|..|+++|.++|++|++++||||||+||||
T Consensus 82 edv~~~ie~~L~~~~g~~g~~lH~grSrnD~~~Ta~rl~~r~~l~~l~~~l~~l~~~L~~~A~~~~~tvm~GrTH~Q~Aq 161 (455)
T PRK04833 82 EDIHSWVEGKLIDKVGDLGKKLHTGRSRNDQVATDLKLWCKDQVAELLTALRQLQSALVETAENNQDAVMPGYTHLQRAQ 161 (455)
T ss_pred chHHHHHHHHHHHHhccccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEeccccCccce
Confidence 99999999999999998899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHH
Q 016801 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298 (382)
Q Consensus 219 P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~ 298 (382)
|+||||||++|+++|.|+.+||.+++++++.+||||||++||++++|+++++++|||..+..|+++++++||++++++++
T Consensus 162 P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgaA~~GT~~~~dr~~~a~~LGf~~~~~n~~~a~~~rd~~~e~~~~ 241 (455)
T PRK04833 162 PVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGSGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSD 241 (455)
T ss_pred eccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCCCHHHHHHHhCCCCCCCCHHHHHhccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 299 l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
++.++++|+|||+||++|+++|||++++++++++||||||||+||+.+|.++++|+++.|+..+++.+++++|++||||+
T Consensus 242 l~~~a~~L~ria~Dl~l~ss~e~g~~el~~~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~rd~ 321 (455)
T PRK04833 242 ASISMVHLSRFAEDLIFFNSGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMLMTLKGLPLAYNKDM 321 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCceeeCCCCCCCcccCCCCCCChHHHHHHHHHHHHHhhHHHHHHHHhCChHHHhhhh
Confidence 99999999999999999999999998888899999999999999999999999999999999999999999999999999
Q ss_pred ccC
Q 016801 379 QTG 381 (382)
Q Consensus 379 qe~ 381 (382)
|+.
T Consensus 322 ~~~ 324 (455)
T PRK04833 322 QED 324 (455)
T ss_pred hhh
Confidence 984
No 8
>PRK06389 argininosuccinate lyase; Provisional
Probab=100.00 E-value=3e-77 Score=601.68 Aligned_cols=313 Identities=27% Similarity=0.349 Sum_probs=298.0
Q ss_pred ccccCCCCcchH-HHHHhc-cccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccC
Q 016801 60 KLWGGRFEESVT-DAVEKF-TESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTD 137 (382)
Q Consensus 60 ~lwg~~~~~~~~-~~~~~f-~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~ 137 (382)
++|+|||+++++ +.++.| ..++.+|++++++++.+.+||++|+++.|+||++++++|.++++++.+ +.|.+++.
T Consensus 2 klw~gr~~~~~~~~~~~~~~~~s~~~D~~l~~~di~~~~AH~~mL~~~gii~~~e~~~i~~~L~~i~~----~~~~~~~~ 77 (434)
T PRK06389 2 KIWSGGAGEELENDFYDNIVKDDIDADKNLIKYEIINLLAYHVALAQRRLITEKAPKCVINALIDIYK----NGIEIDLD 77 (434)
T ss_pred CCcccccCCCCchHHHHHHHCCCHHHHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHc----CCCcCCCC
Confidence 599999999888 778888 889999999999999999999999999999999999999999999865 56888888
Q ss_pred CcchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccc
Q 016801 138 REDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRA 217 (382)
Q Consensus 138 ~~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A 217 (382)
.||+|+++|++|.+++|+.|+++|+||||||++.|+++|++|+.+..+...+..|+++|+++ |.|++||||||+|+|
T Consensus 78 ~EDvh~~iE~~L~~~~G~~gg~lhtgRSRNDqvat~~RL~~r~~~~~~~~~l~~l~~~l~~~---~~dtimpGyTHlQ~A 154 (434)
T PRK06389 78 LEDVHTAIENFVIRRCGDMFKNFRLFLSRNEQVHADLNLFIIDKIIEIEKILYEIIKVIPGF---NLKGRLPGYTHFRQA 154 (434)
T ss_pred CCchHHHHHHHHHHHhchhhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccCceeccccccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999964 999999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHH-HHHHH
Q 016801 218 QPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDF-VLEFL 296 (382)
Q Consensus 218 ~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~-~~e~~ 296 (382)
||+|||||+++|+++|.|+++||.+++++++.+|||+|+.+||.+++|++++|++|||+.+..|+.++..++|. +++++
T Consensus 155 qP~TfG~~l~a~a~~L~rd~~RL~~~~~r~~~~pLGaga~~Gt~~~idr~~~A~lLGf~~~~~n~~~a~~~~~~~~~e~~ 234 (434)
T PRK06389 155 MPMTVNTYINYIKSILYHHINNLDSFLMDLREMPYGYGSGYGSPSSVKFNQMSELLGMEKNIKNPVYSSSLYIKTIENIS 234 (434)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCCchhhHHHHHHHhCCCCCCCCCchhhhccchHHHHHH
Confidence 99999999999999999999999999999999999998888999999999999999999988888876556555 88999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhh
Q 016801 297 SANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 376 (382)
Q Consensus 297 ~~l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~r 376 (382)
++++.++++|+|||+||++|+++ |++++|+++++|||||||||||+.+|.++++|+++.|..++++...+|+|++|+|
T Consensus 235 ~~la~la~~LsRiA~Dl~l~ss~--g~ielpd~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~n~~~~y~~ 312 (434)
T PRK06389 235 YLISSLAVDLSRICQDIIIYYEN--GIITIPDEFTTGSSLMPNKRNPDYLELFQGIAAESISVLSFIAQSELNKTTGYHR 312 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC--CEEEecCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhH
Confidence 99999999999999999999997 8888888899999999999999999999999999999999999999999999999
Q ss_pred hhccC
Q 016801 377 DLQTG 381 (382)
Q Consensus 377 D~qe~ 381 (382)
|+||+
T Consensus 313 D~q~~ 317 (434)
T PRK06389 313 DFQIV 317 (434)
T ss_pred HHHHH
Confidence 99985
No 9
>PRK13353 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=3e-76 Score=605.65 Aligned_cols=330 Identities=26% Similarity=0.301 Sum_probs=305.8
Q ss_pred CCchhhhccc---cCccccccccCCCCcchHHHHHhcccc-ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 016801 44 PKHKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRG 119 (382)
Q Consensus 44 ~~~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~a 119 (382)
..+|+|+|.+ ++|. +.|||.+ |.|++.+|+.+ ..++.+++++++.+++||+++|+++|+||++++++|.++
T Consensus 3 ~~~r~~~d~~g~~~~~~-~~~~g~~----t~r~~~~f~~~~~~~~~~~i~a~~~ve~A~a~~l~~~Glip~~~a~~I~~a 77 (473)
T PRK13353 3 KNMRIEHDLLGEKEVPA-EAYYGIQ----TLRAVENFPITGYKIHPELIRAFAQVKKAAALANADLGLLPRRIAEAIVQA 77 (473)
T ss_pred CCcccccccCCCCCCcc-cccchHH----HHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 3577788766 7898 8999998 99999999875 577789999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCcccccC----CcchhHH----HHHHHHHHhC-CCCce--------eccCCChhhHHHHHHHHHHHHHH
Q 016801 120 LDEIERQIEAGKFMWRTD----REDVHMN----IEAALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRDAI 182 (382)
Q Consensus 120 l~~i~~~~~~~~f~~~~~----~~dv~~a----~e~~l~e~~G-~~g~~--------lH~G~SsnDi~~Ta~~L~lr~~l 182 (382)
|++|..+...++|++++. ++|+||+ +++++.+++| +.|+| ||+|+||||+++|+++|++|+.+
T Consensus 78 l~~i~~~~~~d~f~~~~~~~~~~~~~~~n~~~vi~~~l~e~~g~~~g~~~~~hp~d~vH~GrSrnD~v~Ta~~L~~r~~l 157 (473)
T PRK13353 78 CDEILAGKLHDQFIVDPIQGGAGTSTNMNANEVIANRALELLGGEKGDYHYVSPNDHVNMAQSTNDVFPTAIRIAALNLL 157 (473)
T ss_pred HHHHHhccccCCCCcchhhccccchhcchhhHHHHHHHHHHhCccccCCccCCcccCccCCCChhhHHHHHHHHHHHHHH
Confidence 999987655578877653 5687665 6788889998 55775 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCC
Q 016801 183 DTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGL 262 (382)
Q Consensus 183 ~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~ 262 (382)
..|.+.|..|+++|.++|++|+|++||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+ ||++
T Consensus 158 ~~l~~~L~~l~~~L~~~A~~~~~~im~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~Av-GT~~ 236 (473)
T PRK13353 158 EGLLAAMGALQDVFEEKAAEFDHVIKMGRTQLQDAVPITLGQEFSAYARALKRDRKRIQQAREHLYEVNLGGTAV-GTGL 236 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeeeccccCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccc-cCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCChHH-------HHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccceeecCCCCC
Q 016801 263 PIDRFM-------TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVS 331 (382)
Q Consensus 263 ~~~~~~-------la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~---e~gev~l~~~~~ 331 (382)
++|+++ ++++|||+. +..|+++++++||++++++++++.++++|+|||+||++|+|+ |||||.+|+ ++
T Consensus 237 ~~~~~~~~~~~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~la~la~~l~riA~Dl~llss~pr~e~gev~lp~-~~ 315 (473)
T PRK13353 237 NADPEYIERVVKHLAAITGLPLVGAEDLVDATQNTDAFVEVSGALKVCAVNLSKIANDLRLLSSGPRTGLGEINLPA-VQ 315 (473)
T ss_pred cCChhHHHHHHHHHHHHhCCCCccccchHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCceEEECCC-CC
Confidence 999864 678999994 677999999999999999999999999999999999999977 899999987 99
Q ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 332 TGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 332 ~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
+|||||||||||+.+|.++++|++|.|+..+++.+.++.|++||++.|+
T Consensus 316 ~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~ 364 (473)
T PRK13353 316 PGSSIMPGKVNPVMPEVVNQIAFQVIGNDVTITLAAEAGQLELNVMEPV 364 (473)
T ss_pred CCCCCCCCCcCChHHHHHHHHHHHHHhHHHHHHHHHHcCChhhhhhhhh
Confidence 9999999999999999999999999999999999999999999998875
No 10
>PRK12273 aspA aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=5.7e-76 Score=603.42 Aligned_cols=330 Identities=26% Similarity=0.277 Sum_probs=303.5
Q ss_pred Cchhhhccc---cCccccccccCCCCcchHHHHHhcccc-cccc--HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 016801 45 KHKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISYD--KALYKHDIMGSKAHASMLAKQGLISDSDKNSILR 118 (382)
Q Consensus 45 ~~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d--~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~ 118 (382)
.+|+|.|.+ ++|. +.|||.+ |++++++|+.+ ..++ .+++++++++++||++||+++|+||++++++|.+
T Consensus 4 ~~r~~~~~~~~~~~~~-~~~~~~~----t~~~~~~f~~~~~~~~~~~~~~~~~l~ve~A~a~al~~~Gii~~~~a~~I~~ 78 (472)
T PRK12273 4 NTRIEKDLLGEREVPA-DAYYGIH----TLRAVENFPISGVKISDYPELIRALAMVKKAAALANKELGLLDEEKADAIVA 78 (472)
T ss_pred CcccccccCCCcCCcc-cccchHH----HHHHHHcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 467778766 7898 8899998 99999999863 3444 8999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCcccccC----CcchhHHHHHH----HHHHhC-CCCce--ec------cCCChhhHHHHHHHHHHHHH
Q 016801 119 GLDEIERQIEAGKFMWRTD----REDVHMNIEAA----LTDIIG-EPAKK--LH------TARSRNDQVLTDFRLWCRDA 181 (382)
Q Consensus 119 al~~i~~~~~~~~f~~~~~----~~dv~~a~e~~----l~e~~G-~~g~~--lH------~G~SsnDi~~Ta~~L~lr~~ 181 (382)
+|.++..+...++|+++.. .+|.|+++|.. +.+++| +.++| +| +|+||||+++|+++|++|++
T Consensus 79 al~~i~~~~~~~~~~~~~~~~~~~e~~~~~v~~~i~~~~~e~~g~~~~~~~~vHp~d~v~~GrSrnD~v~Ta~~L~lr~~ 158 (472)
T PRK12273 79 ACDEILAGKLHDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDAYPTAIRIALLLS 158 (472)
T ss_pred HHHHHHhccccCCcccchhhccccchhhhHHHHHHHHHHHHHhCcccCCcceeCCCCCCCCCCCchHHHHHHHHHHHHHH
Confidence 9999977655567876553 77888877755 457889 66667 99 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCC
Q 016801 182 IDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTG 261 (382)
Q Consensus 182 l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~ 261 (382)
+..|.+.|.+|+++|.++|++|+|++||||||+|||||+|||||+++|+++|.|+++||.+++++++.+||||||+ ||+
T Consensus 159 l~~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~AqP~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~plGg~Av-GT~ 237 (472)
T PRK12273 159 LRKLLDALEQLQEAFEAKAKEFADILKMGRTQLQDAVPMTLGQEFGAYAVALAEDRKRLYRAAELLREVNLGATAI-GTG 237 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCEEeecccCccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccce-eCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCChHH-------HHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cceeecCCCC
Q 016801 262 LPIDRFM-------TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSV 330 (382)
Q Consensus 262 ~~~~~~~-------la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e---~gev~l~~~~ 330 (382)
+++|+++ +++.|||.. +..|+++++++||+++|++++++.++++|+|||+||++|+|+| ||||.+|+ +
T Consensus 238 ~~i~~~~~~~v~~~~A~~LGf~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~rlA~Di~llss~e~~e~gev~lp~-~ 316 (472)
T PRK12273 238 LNAPPGYIELVVEKLAEITGLPLVPAEDLIEATQDTGAFVEVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLPA-V 316 (472)
T ss_pred CCCChhHHHHHHHHHHHHcCCCcccCcCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCceEEECCC-C
Confidence 9999864 699999995 6679999999999999999999999999999999999999776 99999984 9
Q ss_pred CCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhccC
Q 016801 331 STGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQTG 381 (382)
Q Consensus 331 ~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe~ 381 (382)
++|||||||||||+.+|.++++|+++.|+..+++++++++|++||+|.|+.
T Consensus 317 ~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 367 (472)
T PRK12273 317 QAGSSIMPGKVNPVIPEVVNQVCFQVIGNDTTVTMAAEAGQLELNVMEPVI 367 (472)
T ss_pred CCcCCCCCcccCcHHHHHHHHHHHHHhhhHHHHHHHHHcCCchhhhhhhhh
Confidence 999999999999999999999999999999999999999999999998863
No 11
>PRK06705 argininosuccinate lyase; Provisional
Probab=100.00 E-value=3.8e-76 Score=608.38 Aligned_cols=320 Identities=29% Similarity=0.424 Sum_probs=303.7
Q ss_pred ccccCCCCcchHHHHHhcccccccc-HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCC
Q 016801 60 KLWGGRFEESVTDAVEKFTESISYD-KALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDR 138 (382)
Q Consensus 60 ~lwg~~~~~~~~~~~~~f~~~~~~d-~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~ 138 (382)
.+||+||++++.+.+. |..++.+| ..++..++.+++||++|++++|+||++++++|.++++++.+ ...+.+.+++..
T Consensus 10 ~~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ve~Aha~~l~~~GiIp~e~a~~I~~al~~~~~-~~~~~l~~~~~~ 87 (502)
T PRK06705 10 KSEGADFPGKTYVDCV-LQHVFNFQRNYLLKDMFQVHKAHIVMLTEENLMKKEEAKFILHALKKVEE-IPEEQLLYTEQH 87 (502)
T ss_pred HHhcccCCCCcchhHH-hhcccchhHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhhh-cccCccccCCCC
Confidence 6899999998888888 88777665 57788999999999999999999999999999999988732 344566667779
Q ss_pred cchhHHHHHHHHHHhC-CCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccc
Q 016801 139 EDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRA 217 (382)
Q Consensus 139 ~dv~~a~e~~l~e~~G-~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A 217 (382)
||+|+.+|..+.+..| +.|+|+|+|+||||+++|+++|++|+.+..+.+.|..|+++|.++|++|+|++||||||+|+|
T Consensus 88 edv~~~ie~~l~~~~G~~~g~~lH~GrSrnD~v~Ta~~L~lr~~l~~l~~~l~~l~~~l~~~A~~~~~t~m~g~TH~Q~A 167 (502)
T PRK06705 88 EDLFFLVEHLISQEAKSDFVSNMHIGRSRNDMGVTMYRMSLRRYVLRLMEHHLLLQESILQLAADHKETIMPAYTHTQPA 167 (502)
T ss_pred CchHHHHHHHHHHhcCchhhccccCCCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEecccCCccc
Confidence 9999999999999998 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHH
Q 016801 218 QPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLS 297 (382)
Q Consensus 218 ~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~ 297 (382)
||||||||+++|+++|.|+++||.+++++++.+|||||+++||++++|+++++++|||+.+..|+++++++||+++|+++
T Consensus 168 qP~T~G~~l~~~~~~l~r~~~rL~~~~~r~~~~plGgaag~gt~~~~~r~~~a~~LGf~~~~~ns~~a~~~rD~~~e~~~ 247 (502)
T PRK06705 168 QPTTFGHYTLAIYDTMQRDLERMKKTYKLLNQSPMGAAALSTTSFPIKRERVADLLGFTNVIENSYDAVAGADYLLEVSS 247 (502)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCchhhhhccCCchHHHHHHHHHcCCCCCcCCHHHHHhccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhh
Q 016801 298 ANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRD 377 (382)
Q Consensus 298 ~l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD 377 (382)
++++++++|+|||+||++|+++|||+|++++++++|||||||||||+.+|.++++|+++.|+..+++..++++|.+|++|
T Consensus 248 ~la~~~~~L~Ria~Dl~~~ss~e~g~iel~e~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~l~~~~~~~~~~~~d 327 (502)
T PRK06705 248 LLMVMMTNTSRWIHDFLLLATKEYDGITVARPYVQISSIMPQKRNPVSIEHARAITSSALGEAFTVFQMIHNTPFGDIVD 327 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCeeeecCCCCCccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhh
Confidence 99999999999999999999999998888889999999999999999999999999999999999999999999999999
Q ss_pred hccC
Q 016801 378 LQTG 381 (382)
Q Consensus 378 ~qe~ 381 (382)
+|++
T Consensus 328 ~q~~ 331 (502)
T PRK06705 328 TEDD 331 (502)
T ss_pred hHhh
Confidence 9975
No 12
>cd01357 Aspartase Aspartase. This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid.
Probab=100.00 E-value=2.5e-75 Score=595.92 Aligned_cols=327 Identities=26% Similarity=0.301 Sum_probs=300.7
Q ss_pred hhhhccc---cCccccccccCCCCcchHHHHHhcccc-ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 016801 47 KTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDE 122 (382)
Q Consensus 47 r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~ 122 (382)
|+|+|.+ ++|. +.|||.+ |.+.+.+|+.. ..+|.+++++++.+++||++||+++|+||++++++|.++|++
T Consensus 1 ~~~~~~~~~~~~~~-~~~~g~~----t~~~~~~~~~~~~~~d~~~i~~~l~ve~A~a~al~~~Giip~~~a~~I~~al~~ 75 (450)
T cd01357 1 RIEHDLLGEREVPA-DAYYGIQ----TLRALENFPISGLKIHPELIRALAMVKKAAALANAELGLLDEEKAEAIVKACDE 75 (450)
T ss_pred CCCcccCCCcCCcc-cccchHH----HHHHHHcCCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 4556655 7898 8899998 99999999864 688999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcccccC----CcchhHHHH----HHHHHHhC-CCCce--------eccCCChhhHHHHHHHHHHHHHHHHH
Q 016801 123 IERQIEAGKFMWRTD----REDVHMNIE----AALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRDAIDTI 185 (382)
Q Consensus 123 i~~~~~~~~f~~~~~----~~dv~~a~e----~~l~e~~G-~~g~~--------lH~G~SsnDi~~Ta~~L~lr~~l~~L 185 (382)
+..+...++|++++. .+|+|++.+ ..+.+++| +.|+| ||+|+||||+++|+++|++|+.+..+
T Consensus 76 i~~~~~~d~~~~~~~~~~~~~~~~~~~~~vi~~~~~e~~g~~~g~~~~~h~~~~vH~GrSrnD~v~Ta~~L~lr~~l~~l 155 (450)
T cd01357 76 IIAGKLHDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDVYPTALRLALILLLRKL 155 (450)
T ss_pred HHhccccCCCccchhhccccchhhhhHhHHHHHHHHHHhCccccCCcccCCcccccCCCChHhHHHHHHHHHHHHHHHHH
Confidence 876544467776543 468776554 55677899 66777 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCC
Q 016801 186 VRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPID 265 (382)
Q Consensus 186 ~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~ 265 (382)
.+.|..|+++|.++|++|++++||||||+|+|||+|||||+++|+++|.|+.+||..++++++.+||||||+ ||++++|
T Consensus 156 ~~~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~Av-Gt~~~~~ 234 (450)
T cd01357 156 LDALAALQEAFQAKAREFADVLKMGRTQLQDAVPMTLGQEFGAYATALKRDRARIYKARERLREVNLGGTAI-GTGINAP 234 (450)
T ss_pred HHHHHHHHHHHHHHHHHccCCEeeccccCcccccchHHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCce-eCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999898 9999999
Q ss_pred hHH-------HHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cceeecCCCCCCCC
Q 016801 266 RFM-------TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVSTGS 334 (382)
Q Consensus 266 ~~~-------la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e---~gev~l~~~~~~GS 334 (382)
+++ +++.|||.. +..|+++++++||++++++++++.++++|+|||+||++|+|+| ||||.+| .+++||
T Consensus 235 ~~~~~~v~~~~a~~LGl~~~~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~riA~Di~l~ss~e~~~~gev~~p-~~~~GS 313 (450)
T cd01357 235 PGYIELVVEKLSEITGLPLKRAENLIDATQNTDAFVEVSGALKRLAVKLSKIANDLRLLSSGPRAGLGEINLP-AVQPGS 313 (450)
T ss_pred hhHHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceeEECC-CCCCcC
Confidence 876 999999995 5679999999999999999999999999999999999999776 9999998 699999
Q ss_pred CCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 335 SIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 335 SiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
|||||||||+.+|.++++|+++.|+..+++.+.++.|++||+|.|+
T Consensus 314 SiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~ 359 (450)
T cd01357 314 SIMPGKVNPVIPEVVNQVAFQVIGNDLTITMAAEAGQLELNVFEPV 359 (450)
T ss_pred CCCCCCcCcHHHHHHHHHHHHHhhHHHHHHHHHhcCcchhhcchHH
Confidence 9999999999999999999999999999989899999999999875
No 13
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=100.00 E-value=4e-75 Score=596.70 Aligned_cols=326 Identities=24% Similarity=0.314 Sum_probs=296.4
Q ss_pred chhhhccc---cCccccccccCCCCcchHHHHHhcccc-ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 016801 46 HKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLD 121 (382)
Q Consensus 46 ~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~ 121 (382)
+|+|+|.+ ++|+ ++|||++ +++.+++|+.+ ..+|.+++++++.+++||+++|+++|+||++.+++|.++|+
T Consensus 4 ~r~e~d~~g~~~~~~-~~l~g~~----~~~~~~~f~~s~~~~~~~~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~al~ 78 (464)
T PRK00485 4 TRIEKDSMGEVEVPA-DALWGAQ----TQRSLENFPIGGERMPRELIRALALLKKAAARVNAELGLLDAEKADAIVAAAD 78 (464)
T ss_pred cccccccCCCcCCcc-ccccchh----hHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 56666654 8898 7899998 88999999877 89999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCccccc----CCcchhHHH----HHHHHHHhC-C--------CCceeccCCChhhHHHHHHHHHHHHHH-H
Q 016801 122 EIERQIEAGKFMWRT----DREDVHMNI----EAALTDIIG-E--------PAKKLHTARSRNDQVLTDFRLWCRDAI-D 183 (382)
Q Consensus 122 ~i~~~~~~~~f~~~~----~~~dv~~a~----e~~l~e~~G-~--------~g~~lH~G~SsnDi~~Ta~~L~lr~~l-~ 183 (382)
+|..+..+++|+.++ ..+|+|+++ +..+.+..| + .++|||+|+||||+++|+++|++|+++ .
T Consensus 79 ~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~g~~~~~~~~~h~~~~vh~G~SrnD~v~Ta~~L~lr~~l~~ 158 (464)
T PRK00485 79 EVIAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAIVE 158 (464)
T ss_pred HHHhCccccCCCcchhhccccccccccHHHHHHHHHHHhcCccccccCccCccccCCCCCCchhHHHHHHHHHHHHHHHH
Confidence 997654457787765 477887766 455555567 5 667788999999999999999999999 7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCC
Q 016801 184 TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLP 263 (382)
Q Consensus 184 ~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~ 263 (382)
.|.+.|.+|+++|.++|++|+|++||||||+|+||||||||||++|+++|.|+++||.+++++++.+||||||+ ||+++
T Consensus 159 ~l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~PiTfG~~~~~~~~~l~R~~~RL~~~~~r~~~~pLGg~Av-GT~~~ 237 (464)
T PRK00485 159 RLLPALEHLRDTLAAKAEEFADIVKIGRTHLQDATPLTLGQEFSGYAAQLEHGIERIEAALPHLYELALGGTAV-GTGLN 237 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeeeeecCcCceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccc-cCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887 99999
Q ss_pred CChH-------HHHHHcCCC-CCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccceeecCCCCCC
Q 016801 264 IDRF-------MTAEALEFT-APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVST 332 (382)
Q Consensus 264 ~~~~-------~la~~LG~~-~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~---e~gev~l~~~~~~ 332 (382)
+|++ ++|+.|||+ .+..|.++++++||+++|++++++.++++|+|||+||++|+|+ |||||.+|+ .++
T Consensus 238 ~~~~~~~~v~~~~A~~LGl~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~ria~Dl~l~ss~~~~e~gev~lp~-~~~ 316 (464)
T PRK00485 238 AHPGFAERVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLASGPRCGLGEISLPE-NEP 316 (464)
T ss_pred CChhHHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCceEEcCC-CCC
Confidence 9987 499999999 6788999999999999999999999999999999999999976 599999987 479
Q ss_pred CCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 333 GSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 333 GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
|||||||||||+.+|.++++|+++.|+..++++..++.|++++.+.
T Consensus 317 GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~e~~~~~ 362 (464)
T PRK00485 317 GSSIMPGKVNPTQCEALTMVCAQVMGNDAAVTFAGSQGNFELNVFK 362 (464)
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHhhhHHHHHHHhccCcccccccC
Confidence 9999999999999999999999999999999988788877665543
No 14
>PRK14515 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=4.1e-75 Score=595.83 Aligned_cols=330 Identities=24% Similarity=0.266 Sum_probs=300.7
Q ss_pred CCCCchhhhccc---cCccccccccCCCCcchHHHHHhcc-ccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 016801 42 AEPKHKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFT-ESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSIL 117 (382)
Q Consensus 42 ~~~~~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~-~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~ 117 (382)
.++.+|+|.|.+ ++|. +.|||.+ |.|++++|+ .+..+|+++|++++.+++|||++|.++|+|+++++++|.
T Consensus 7 ~~~~~r~e~d~~g~~~~p~-~~~~g~~----t~ra~~~f~~~~~~~~~~~i~~~~~v~~A~a~~l~~~G~l~~~~~~~I~ 81 (479)
T PRK14515 7 VKNGVRIEKDFLGEKEVPN-YAYYGVQ----TMRAVENFPITGYKIHEGLIKAFAIVKKAAALANTDVGRLELNKGGAIA 81 (479)
T ss_pred CCCCCccccccCCCCCCcc-cccchHH----HHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Confidence 346788888866 7898 8999999 999999995 458899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCcccccC--Ccc------hhHHHHHHHHHHhC-CCCce--------eccCCChhhHHHHHHHHHHHH
Q 016801 118 RGLDEIERQIEAGKFMWRTD--RED------VHMNIEAALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRD 180 (382)
Q Consensus 118 ~al~~i~~~~~~~~f~~~~~--~~d------v~~a~e~~l~e~~G-~~g~~--------lH~G~SsnDi~~Ta~~L~lr~ 180 (382)
++|++|..+...++|++++. +++ +|.++|+++.+++| +.|+| ||+||||||+++|+++|++|+
T Consensus 82 ~al~ei~~~~~~~~f~~~~~~~g~~t~~nmnvnevie~~~~~~~G~~~g~~~~~hpnd~vn~grS~ND~v~Ta~~L~~~~ 161 (479)
T PRK14515 82 EAAQEILDGKWHDHFIVDPIQGGAGTSMNMNANEVIANRALELLGMEKGDYHYISPNSHVNMAQSTNDAFPTAIHIATLN 161 (479)
T ss_pred HHHHHHHcCcccCCCCCCcccCCCcccccchHHHHHHHHHHHHhCcccCCccccCccccCCCCCCchhHHHHHHHHHHHH
Confidence 99999999888889998763 344 45559999999999 55774 559999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCC
Q 016801 181 AIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGT 260 (382)
Q Consensus 181 ~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt 260 (382)
.+..|.+.|..|+++|.++|++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+ ||
T Consensus 162 ~l~~l~~~L~~L~~~L~~~A~~~~~~vm~GrTHlQ~A~PiT~G~~~~~~a~~l~r~~~RL~~~~~~l~~~pLG~gAv-GT 240 (479)
T PRK14515 162 ALEGLLQTMGYMHDVFELKAEQFDHVIKMGRTHLQDAVPIRLGQEFKAYSRVLERDMKRIQQSRQHLYEVNMGATAV-GT 240 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccchhccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccc-cC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCCCChHH-------HHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cceeecCCC
Q 016801 261 GLPIDRFM-------TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDS 329 (382)
Q Consensus 261 ~~~~~~~~-------la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e---~gev~l~~~ 329 (382)
++++|+++ +++.+|+.. +..|+++++++||++++++++++.++++|+|||+||++|+|+| +||+.+|+
T Consensus 241 ~~~~~~~~~~~~l~~la~~~gl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~kiA~Dl~llsS~p~~g~~Ei~lp~- 319 (479)
T PRK14515 241 GLNADPEYIEAVVKHLAAISELPLVGAEDLVDATQNTDAYTEVSAALKVCMMNMSKIANDLRLMASGPRVGLAEIMLPA- 319 (479)
T ss_pred CCCCChhHHHHHHHHHHHHhCCCCCCCcchHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCeeEEeCCC-
Confidence 99999875 444566653 3458999999999999999999999999999999999999875 45677986
Q ss_pred CCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhc
Q 016801 330 VSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQ 379 (382)
Q Consensus 330 ~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~q 379 (382)
+++||||||||+||+.+|.++++|++|+|++.+++++.++.+++||. +|
T Consensus 320 ~~~GSSiMP~KrNP~~~E~i~~~a~~v~G~~~~~~~~~~~~~le~n~-~~ 368 (479)
T PRK14515 320 RQPGSSIMPGKVNPVMPEVINQIAFQVIGNDHTICLASEAGQLELNV-ME 368 (479)
T ss_pred CCCCcCCCCcccCchHHHHHHHHHHHHHhHHHHHHHHHhcccHHHHH-hc
Confidence 79999999999999999999999999999999999999999999886 54
No 15
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=100.00 E-value=1.1e-74 Score=612.75 Aligned_cols=322 Identities=46% Similarity=0.783 Sum_probs=306.6
Q ss_pred ccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcC-CcccccCC
Q 016801 60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAG-KFMWRTDR 138 (382)
Q Consensus 60 ~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~-~f~~~~~~ 138 (382)
.+|++||++++++.+..|+.+..+|+.+...++.+.+||++++++.|+||++++++|.+++.++..+...+ .+...+..
T Consensus 2 ~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~e~i~~~~A~a~~l~~~Giip~~~a~~I~~~l~~~~~~~~~~~~~~~~~~~ 81 (614)
T PRK12308 2 ALWGGRFSQAADTRFKQFNDSLRFDYRLAEQDIVGSIAWSKALLSVGVLSEEEQQKLELALNELKLEVMEDPEQILLSDA 81 (614)
T ss_pred cccccCCCCcccHHHHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCcc
Confidence 58999999999999999999999999999898999999999999999999999999999999886443222 45556668
Q ss_pred cchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccc
Q 016801 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (382)
Q Consensus 139 ~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~ 218 (382)
+|+|.++|+.|.+++|+.++|+|+|+||||+++|+++|++|+.+..|.+.|.+|+++|.++|++|++++||||||+||||
T Consensus 82 ed~h~~ie~~L~~~~g~~~~~iH~g~S~nD~~~Ta~~L~~r~~~~~l~~~l~~l~~~l~~~a~~~~~t~m~grTH~Q~A~ 161 (614)
T PRK12308 82 EDIHSWVEQQLIGKVGDLGKKLHTGRSRNDQVATDLKLWCRQQGQQLLLALDQLQQQMVNVAERHQGTVLPGYTHLQRAQ 161 (614)
T ss_pred ccHHHHHHHHHHHHhcccccceecCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEeecCcCCcccE
Confidence 99999999999999998899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHH
Q 016801 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298 (382)
Q Consensus 219 P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~ 298 (382)
|+|||||+++|+++|.|+++||.+++++++.+|||||+++||++++|++++++.|||..+..|+++++++||++++++++
T Consensus 162 P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgga~agt~~~~~r~~~a~~LG~~~~~~n~~da~~~rd~~~e~~~~ 241 (614)
T PRK12308 162 PVTFAHWCLAYVEMFERDYSRLEDALTRLDTCPLGSGALAGTAYPIDREALAHNLGFRRATRNSLDSVSDRDHVMELMSV 241 (614)
T ss_pred EecHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhccccCCCCCCCHHHHHHHhCCCCCcCCHHHHHcCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 299 l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
++.++++|+|||+||++|+++|+|++++++++++||||||||+||+.+|.++++|+++.|+..+++.+++++|++||||+
T Consensus 242 l~~~~~~l~ria~Dl~~~ss~e~g~~el~~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rd~ 321 (614)
T PRK12308 242 ASISMLHLSRLAEDLIFYNSGESGFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGALAGMMMTVKALPLAYNKDM 321 (614)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCCEEeCccCCCccccCcCccCCcHHHHHHHHHHHHhhHHHHHHHHHcCCchhhccch
Confidence 99999999999999999999999988888889999999999999999999999999999999999999999999999999
Q ss_pred ccC
Q 016801 379 QTG 381 (382)
Q Consensus 379 qe~ 381 (382)
|+.
T Consensus 322 ~~~ 324 (614)
T PRK12308 322 QED 324 (614)
T ss_pred hhh
Confidence 974
No 16
>PLN00134 fumarate hydratase; Provisional
Probab=100.00 E-value=1.2e-73 Score=583.87 Aligned_cols=319 Identities=22% Similarity=0.304 Sum_probs=296.2
Q ss_pred ccccCccccccccCCCCcchHHHHHhcccc---ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Q 016801 51 CKMSASKEVKLWGGRFEESVTDAVEKFTES---ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQI 127 (382)
Q Consensus 51 ~~~~~p~~~~lwg~~~~~~~~~~~~~f~~~---~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~ 127 (382)
+.+++|. +.|||.+ |.|++++|+.+ ...+..++++++.+++||++||.+.|+||++++++|.++|++|..+.
T Consensus 2 g~~~~p~-~~~~g~~----t~ra~~nf~~~~~~~~~~~~~i~a~~~v~~A~a~~l~~~G~l~~~~a~~I~~al~ei~~~~ 76 (458)
T PLN00134 2 GPIQVPA-DKLWGAQ----TQRSLQNFEIGGERERMPEPIVRAFGIVKKAAAKVNMEYGLLDPDIGKAIMQAADEVAEGK 76 (458)
T ss_pred CCccCCc-ccchhHH----HHHHHHhcCCCCCccCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCc
Confidence 3467898 8899998 99999999877 47789999999999999999999999999999999999999999887
Q ss_pred hcCCccccc---C-----CcchhHHHHHHHHHHhC-CCCce--ec------cCCChhhHHHHHHHHHHHHH-HHHHHHHH
Q 016801 128 EAGKFMWRT---D-----REDVHMNIEAALTDIIG-EPAKK--LH------TARSRNDQVLTDFRLWCRDA-IDTIVRSI 189 (382)
Q Consensus 128 ~~~~f~~~~---~-----~~dv~~a~e~~l~e~~G-~~g~~--lH------~G~SsnDi~~Ta~~L~lr~~-l~~L~~~l 189 (382)
..++|++++ + ++++|.++|+++.|++| +.|+| +| +|+||||+++|+++|++|+. +..|.+.|
T Consensus 77 ~~~~f~~~~~~~g~g~~~~~~v~evie~~l~e~~g~~~g~~~~lHp~d~vh~G~S~nDiv~Ta~~L~~~~~~~~~l~~~l 156 (458)
T PLN00134 77 LDDHFPLVVWQTGSGTQTNMNANEVIANRAAEILGGPVGEKSPVHPNDHVNRSQSSNDTFPTAMHIAAATEIHSRLIPAL 156 (458)
T ss_pred ccCCccccccccCCcccccCcHHHHHHHHHHHHhCcccCCccccCcccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 778998876 3 45567779999999999 57888 88 99999999999999999955 77899999
Q ss_pred HHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHH-
Q 016801 190 QRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFM- 268 (382)
Q Consensus 190 ~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~- 268 (382)
.+|+++|.++|++|+|++||||||+|+|||+||||||++|+++|.|+++||.+++++++.+||||||+ ||++++|+++
T Consensus 157 ~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~Av-GT~~~~~~~~~ 235 (458)
T PLN00134 157 KELHESLRAKSFEFKDIVKIGRTHLQDAVPLTLGQEFSGYATQVKYGLNRVQCTLPRLYELAQGGTAV-GTGLNTKKGFD 235 (458)
T ss_pred HHHHHHHHHHHHHhcCCccccccccCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeee-cCCccCChhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999898 9999999874
Q ss_pred ------HHHHcCCCCC-CCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccceeecCCCCCCCCCCCC
Q 016801 269 ------TAEALEFTAP-MRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVSTGSSIMP 338 (382)
Q Consensus 269 ------la~~LG~~~~-~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~---e~gev~l~~~~~~GSSiMP 338 (382)
+++.|||+.+ ..|.++++++||++++++++++.++++|+|||+||++|+|+ |||||.+|+ .++||||||
T Consensus 236 ~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~p~~e~gev~lp~-~~~GSSiMP 314 (458)
T PLN00134 236 EKIAAAVAEETGLPFVTAPNKFEALAAHDAFVELSGALNTVAVSLMKIANDIRLLGSGPRCGLGELNLPE-NEPGSSIMP 314 (458)
T ss_pred HHHHHHHHHHhCCCCCCCccHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcceEECCC-CCCCCCCCC
Confidence 9999999975 78899999999999999999999999999999999999976 799999986 589999999
Q ss_pred CCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhh
Q 016801 339 QKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 376 (382)
Q Consensus 339 ~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~r 376 (382)
||+||+.+|.++++|+++.|++.++++..++.++.+|.
T Consensus 315 ~KrNPv~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~ 352 (458)
T PLN00134 315 GKVNPTQCEALTMVCAQVMGNHVAITVGGSAGHFELNV 352 (458)
T ss_pred CCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhc
Confidence 99999999999999999999999999887777777763
No 17
>TIGR00979 fumC_II fumarate hydratase, class II. Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs.
Probab=100.00 E-value=1.8e-73 Score=582.63 Aligned_cols=323 Identities=22% Similarity=0.264 Sum_probs=294.6
Q ss_pred hhhhc---cccCccccccccCCCCcchHHHHHhcccc-ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 016801 47 KTVLC---KMSASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDE 122 (382)
Q Consensus 47 r~~~~---~~~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~ 122 (382)
|+|+| .+++|+ ++|||.+ |++++++|+.+ ..++..++++++.|++||+++|+++|+||++.+++|.++|++
T Consensus 2 r~e~d~~g~~~~p~-~~~~g~~----t~r~~~~f~~~~~~~~~~~i~a~~~ve~A~a~a~~~~Giip~~~a~~I~~a~~~ 76 (458)
T TIGR00979 2 RIEKDSMGEIQVPA-DKYWGAQ----TQRSLENFKIGTEKMPLELIHAFAILKKAAAIVNEDLGKLDAKKADAIVQAADE 76 (458)
T ss_pred CCccccCCCCCCcc-cchhhHH----HHHHHhcCcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 45554 558999 8899887 99999999876 567789999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcccc----cCCcchhH----HHHHHHHHHhC-CCCc--eec------cCCChhhHHHHHHHHHHHHHH-HH
Q 016801 123 IERQIEAGKFMWR----TDREDVHM----NIEAALTDIIG-EPAK--KLH------TARSRNDQVLTDFRLWCRDAI-DT 184 (382)
Q Consensus 123 i~~~~~~~~f~~~----~~~~dv~~----a~e~~l~e~~G-~~g~--~lH------~G~SsnDi~~Ta~~L~lr~~l-~~ 184 (382)
+..+..+++|+.+ ...+++|| .++.++.+++| +.|+ |+| +|+||||++||+++|++|+.+ ..
T Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~m~~~~via~~l~e~~g~~~g~~~~vH~~d~vn~G~S~nDiv~Ta~~L~lr~~l~~~ 156 (458)
T TIGR00979 77 ILAGKLDDHFPLVVWQTGSGTQSNMNVNEVIANRAIELLGGKLGSKQPVHPNDHVNKSQSSNDTFPTAMHIAAVLAIKNQ 156 (458)
T ss_pred HHhccccCCCceecccccccccccccHHHHHHHHHHHHcCcccCCCceeCCCCCCCCCCCcccHHHHHHHHHHHHHHHHH
Confidence 9876555778766 23555544 44558999998 6644 599 699999999999999999999 59
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCC
Q 016801 185 IVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPI 264 (382)
Q Consensus 185 L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~ 264 (382)
|.+.|.+|+++|.++|++|+|++|+||||+||||||||||||++|+++|.|+++||..++++++.+||||||+ ||++++
T Consensus 157 l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~Av-GT~~~~ 235 (458)
T TIGR00979 157 LIPALENLKKTLDAKSKEFAHIVKIGRTHLQDATPLTLGQEFSGYVAQLEHGLERIAYSLPHLYELAIGGTAV-GTGLNT 235 (458)
T ss_pred HHHHHHHHHHHHHHHHHHccCCeeecccccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChh-cCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999899 999999
Q ss_pred ChH-------HHHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccceeecCCCCCCC
Q 016801 265 DRF-------MTAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVSTG 333 (382)
Q Consensus 265 ~~~-------~la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~---e~gev~l~~~~~~G 333 (382)
|++ ++++.|||+. +..|+++++++||++++++++++.++++|+|||+||++|+|+ |||||.+|+ +++|
T Consensus 236 ~~~~~~~v~~~~a~~LGl~~~~~~n~~~~~~~rD~~~e~~~~La~la~~L~kia~Dl~llss~~~~e~gev~~p~-~~~G 314 (458)
T TIGR00979 236 HPGFDEKVAEEIAKETGLPFVTAPNKFEALAAHDAIVEAHGALKTLAASLMKIANDIRWLGSGPRCGLGELFIPE-NEPG 314 (458)
T ss_pred ChhHHHHHHHHHHHHhCCCCeecCcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCceeEECCC-CCCC
Confidence 987 5999999997 678888999999999999999999999999999999999965 699999986 8999
Q ss_pred CCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhh
Q 016801 334 SSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 376 (382)
Q Consensus 334 SSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~r 376 (382)
|||||||+||+.+|.++++|+++.|+..+++.++++.++.+|.
T Consensus 315 SSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~ 357 (458)
T TIGR00979 315 SSIMPGKVNPTQCEALTMVCVQVMGNDATIGFAGSQGNFELNV 357 (458)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHhhHHHHHHHHHhccchhhh
Confidence 9999999999999999999999999999999999988877774
No 18
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions. The Lyase class I family contains class II fumarase, aspartase, adenylosuccinate lyase (ASL), argininosuccinate lyase (ASAL), prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. It belongs to the Lyase_I superfamily. Proteins of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits.
Probab=100.00 E-value=1.5e-73 Score=561.96 Aligned_cols=294 Identities=42% Similarity=0.566 Sum_probs=277.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCCcchhHHHHHHHHHHhCCC-CceeccCCCh
Q 016801 88 YKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEP-AKKLHTARSR 166 (382)
Q Consensus 88 ~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G~~-g~~lH~G~Ss 166 (382)
+++++.+++||+++|.++|+||+++++.|.++|.++..+.....+......+|.|+++|+.+.+++|+. ++|+|+|+||
T Consensus 1 ~~~~l~ve~A~a~al~~~Gli~~~~a~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~g~~~~~~lH~G~S~ 80 (325)
T cd01334 1 IRADLQVEKAHAKALAELGLLPKEAAEAILAALDEILEGIAADQVEQEGSGTHDVMAVEEVLAERAGELNGGYVHTGRSS 80 (325)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhCccccCeeeCCCCccHHHHHHHHHHHHhccccCCCCccCCCC
Confidence 367889999999999999999999999999999998866543333445568899999999999999955 9999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016801 167 NDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVR 246 (382)
Q Consensus 167 nDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~ 246 (382)
||+++|+++|++|+.+..+.+.|.+++++|.++|++|+|++||||||+|||||||||||+++|+++|.|+++||.+++++
T Consensus 81 nDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (325)
T cd01334 81 NDIVDTALRLALRDALDILLPALKALIDALAAKAEEHKDTVMPGRTHLQDAQPTTLGHELAAWAAELERDLERLEEALKR 160 (325)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEeecccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccccCCCC--CCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccee
Q 016801 247 MNFCPLGACALAGTGL--PIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFI 324 (382)
Q Consensus 247 ~~~~~lGggA~aGt~~--~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e~gev 324 (382)
++.+|||+||++|+.+ +++++++++.|||..+.+|+++++++||+++|++++++.++++|+|||+|+++|+++||||+
T Consensus 161 ~~~~~lG~gA~g~~~~~~~~~~~~~a~~LG~~~~~~~~~~a~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~~~~e~gev 240 (325)
T cd01334 161 LNVLPLGGGAVGTGANAPPIDRERVAELLGFFGPAPNSTQAVSDRDFLVELLSALALLAVSLSKIANDLRLLSSGEFGEV 240 (325)
T ss_pred hhhcCCcHhHHhCcCCCCcchHHHHHHHhcCcCcCcCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeE
Confidence 9999999999977778 89999999999997788899899999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhccC
Q 016801 325 TPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQTG 381 (382)
Q Consensus 325 ~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe~ 381 (382)
.+|+..++|||||||||||+.+|.++++|+++.|...+++.++++.|.+|++|.|++
T Consensus 241 ~~~~~~~~gSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 297 (325)
T cd01334 241 ELPDAKQPGSSIMPQKVNPVILELVRGLAGRVIGNLAALLEALKGGPLEDNVDSPVE 297 (325)
T ss_pred ECCCCCCCCcccCCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHhcCchhhhcccHHH
Confidence 999877999999999999999999999999999999999999999999999999875
No 19
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL). This group contains ASAL and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASAL is a cytosolic enzyme which catalyzes the reversible breakdown of argininosuccinate to arginine and fumarate during arginine biosynthesis. In ureotelic species ASAL also catalyzes a reaction involved in the production of urea. Included in this group are the major soluble avian eye lens proteins from duck, delta 1 and delta 2 crystallin. Of these two isoforms only delta 2 has retained ASAL activity. These crystallins may have evolved by, gene recruitment of ASAL followed by gene duplication.
Probab=100.00 E-value=2.5e-73 Score=580.57 Aligned_cols=301 Identities=57% Similarity=0.881 Sum_probs=288.9
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCCcchhHHHHHHHHHHhCCCCcee
Q 016801 81 ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKL 160 (382)
Q Consensus 81 ~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G~~g~~l 160 (382)
+.+|++++++++.+++||+++|+++|+||++.+++|.++|+++..+...+.|..++..+|+|+++|+++.+++|+.++||
T Consensus 2 ~~~d~~~~~~~~~ve~A~a~al~~~Gii~~~~a~~I~~al~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~g~~~~~i 81 (435)
T cd01359 2 ISFDRRLFEEDIAGSIAHAVMLAEQGILTEEEAAKILAGLAKIRAEIEAGAFELDPEDEDIHMAIERRLIERIGDVGGKL 81 (435)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhcccCCccCCCCCCcHHHHHHHHHHHHHHHHHhhh
Confidence 45788999999999999999999999999999999999999998765567888777789999999999999999888999
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHH
Q 016801 161 HTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRL 240 (382)
Q Consensus 161 H~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL 240 (382)
|+|+||||+++|+++|++|+++..|.+.|.+|+++|.++|++|+|++||||||+|||||+|||||+++|+++|.|+++||
T Consensus 82 H~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL 161 (435)
T cd01359 82 HTGRSRNDQVATDLRLYLRDALLELLELLLDLQRALLDRAEEHADTIMPGYTHLQRAQPITFGHYLLAYAEMLERDLERL 161 (435)
T ss_pred hccCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEecCCCCCccceeccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 016801 241 QDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE 320 (382)
Q Consensus 241 ~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e 320 (382)
.+++++++.+||||++++||++++|++++++.|||..+..|.++++++||++++++++++.++++|+|||+||++|+++|
T Consensus 162 ~~~~~~~~~~~lGgaag~gt~~~~~~~~~a~~LG~~~~~~~~~~a~~~rd~~~e~~~~l~~~a~~l~ria~Dl~l~~~~e 241 (435)
T cd01359 162 ADAYKRVNVSPLGAGALAGTTFPIDRERTAELLGFDGPTENSLDAVSDRDFVLEFLSAAALLMVHLSRLAEDLILWSTQE 241 (435)
T ss_pred HHHHHHhCcCCcccccccCCCCCCCHHHHHHHcCCCCCccCHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999998899999999999999999988888778889999999999999999999999999999999999
Q ss_pred cceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhccC
Q 016801 321 FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQTG 381 (382)
Q Consensus 321 ~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe~ 381 (382)
||||.+|+++.+||||||||+||+.+|.++++|.++.|+..+++.+++++|++|+||+|+.
T Consensus 242 ~gev~lpe~~~~GSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~~d~~~~ 302 (435)
T cd01359 242 FGFVELPDAYSTGSSIMPQKKNPDVLELIRGKAGRVIGALAGLLTTLKGLPLAYNKDLQED 302 (435)
T ss_pred CCeeeCCCCCCCccccCCCCCCCcHHHHHHHHHHHHhhHHhHHHHHhcCCCCccchhHHHh
Confidence 9999998888899999999999999999999999999999999999999999999999864
No 20
>cd01362 Fumarase_classII Class II fumarases. This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=1.9e-71 Score=567.68 Aligned_cols=327 Identities=23% Similarity=0.302 Sum_probs=293.7
Q ss_pred hhhhccc---cCccccccccCCCCcchHHHHHhcccc-ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 016801 47 KTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDE 122 (382)
Q Consensus 47 r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~ 122 (382)
|+|+|.+ ++|+ .+|||.+ |.+.+++|+.+ ...++.++++++.+++||+++|+++|+||++.+++|.++|++
T Consensus 1 ~~~~~~~~~~~~~~-~~~~g~~----~~~~~~~f~~~~~~~~~~~i~~~l~ve~A~a~al~~~GiIp~~~a~~I~~al~~ 75 (455)
T cd01362 1 RIEKDSMGEVEVPA-DALWGAQ----TQRSLENFPIGGERMPRELIRALGLLKKAAAQANAELGLLDEEKADAIVQAADE 75 (455)
T ss_pred CCCcccCCCcCCcc-ccchhHH----HHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 4555544 7898 8899876 89999999755 456689999999999999999999999999999999999999
Q ss_pred HHHHhhcCCccccc----CCcchhHHHH----HHHHHHhC---------CCCceeccCCChhhHHHHHHHHHHHHHHH-H
Q 016801 123 IERQIEAGKFMWRT----DREDVHMNIE----AALTDIIG---------EPAKKLHTARSRNDQVLTDFRLWCRDAID-T 184 (382)
Q Consensus 123 i~~~~~~~~f~~~~----~~~dv~~a~e----~~l~e~~G---------~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~-~ 184 (382)
|.....+++|+.++ ..+++|++++ ....+..| +.++|||+|+||||+++|+++|++|+++. .
T Consensus 76 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~~~~~~~vH~G~SrnDiv~Ta~~L~lr~~l~~~ 155 (455)
T cd01362 76 VIAGKLDDHFPLVVWQTGSGTQTNMNVNEVIANRAIELLGGVLGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAALALQER 155 (455)
T ss_pred HHhcccccCCceehhhccccccccccHHHHHHHHHHHhcCcccCCcCcCCccccccCCCCchhHHHHHHHHHHHHHHHHH
Confidence 97653456777665 4667666544 33346667 34667999999999999999999999995 5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCC
Q 016801 185 IVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPI 264 (382)
Q Consensus 185 L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~ 264 (382)
+.+.|.+|+++|.++|++|++++||||||+|+|||+||||||++|+++|.|+++||..++++++.+||||||+ ||++++
T Consensus 156 l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~ 234 (455)
T cd01362 156 LLPALKHLIDALDAKADEFKDIVKIGRTHLQDATPLTLGQEFSGYAAQLEHAIARIEAALPRLYELALGGTAV-GTGLNA 234 (455)
T ss_pred HHHHHHHHHHHHHHHHHHccCCeeeccccCCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcCCeec-cCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998887 999999
Q ss_pred ChH-------HHHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccceeecCCCCCCC
Q 016801 265 DRF-------MTAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVSTG 333 (382)
Q Consensus 265 ~~~-------~la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~---e~gev~l~~~~~~G 333 (382)
|++ ++++.|||.. +..|.++++++||++++++++++.++++|+|||+||++|+|+ |||||.+|+ +++|
T Consensus 235 ~~~~~~~v~~~~a~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~l~ria~Dl~~~~s~~~~e~gev~~~~-~~~G 313 (455)
T cd01362 235 HPGFAEKVAAELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLGSGPRCGLGELSLPE-NEPG 313 (455)
T ss_pred ChhHHHHHHHHHHHHhCCCCccCCCHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCCceEECCC-CCCC
Confidence 975 7899999994 678999999999999999999999999999999999999965 799999986 7999
Q ss_pred CCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 334 SSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 334 SSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
|||||||+||+.+|.++++|.++.|+..+++.++++.++.+|.|.++
T Consensus 314 SS~MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~ 360 (455)
T cd01362 314 SSIMPGKVNPTQCEALTMVAAQVMGNDAAITIAGSSGNFELNVFKPV 360 (455)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHhhhHHHHHHHHhcCchhhhhcchH
Confidence 99999999999999999999999999999999999999999987654
No 21
>TIGR00839 aspA aspartate ammonia-lyase. Fumarate hydratase scores as high as 570 bits against this model.
Probab=100.00 E-value=4.2e-71 Score=565.78 Aligned_cols=323 Identities=25% Similarity=0.252 Sum_probs=292.4
Q ss_pred hhhhc---cccCccccccccCCCCcchHHHHHhcccc-cccc--HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 016801 47 KTVLC---KMSASKEVKLWGGRFEESVTDAVEKFTES-ISYD--KALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGL 120 (382)
Q Consensus 47 r~~~~---~~~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d--~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al 120 (382)
|+|.| .+++|. +.|||.+ |+|++++|..+ .+++ .+++++++.+++||+++|+++|+||++.+++|.++|
T Consensus 1 r~~~~~~~~~~~~~-~~~~~~~----~~r~~~~~~~~~~~~~~~~~~i~~~l~ve~A~a~al~e~GiIp~~~a~~I~~al 75 (468)
T TIGR00839 1 RIEEDLLGEREVPA-DAYYGIH----TLRASENFYISNNKISDIPEFVRGMVMVKKAAALANKELGTIPESIANAIVAAC 75 (468)
T ss_pred CCCcccCCCCCCcc-cccchHH----HHHHHHcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Confidence 34444 458898 9999988 89999999853 3444 899999999999999999999999999999999999
Q ss_pred HHHHH-HhhcCCcccccC----CcchhHHH----HHHHHHHhC-CCCceecc--------CCChhhHHHHHHHHHHHHHH
Q 016801 121 DEIER-QIEAGKFMWRTD----REDVHMNI----EAALTDIIG-EPAKKLHT--------ARSRNDQVLTDFRLWCRDAI 182 (382)
Q Consensus 121 ~~i~~-~~~~~~f~~~~~----~~dv~~a~----e~~l~e~~G-~~g~~lH~--------G~SsnDi~~Ta~~L~lr~~l 182 (382)
+++.. +...+.|++++. ++|+|+++ |..+.+.+| +.|+|+|+ |+||||+++|+++|++|+.+
T Consensus 76 ~~~~d~~~~~~~~~l~~~~~~~g~~~~~~v~~vie~~l~e~~g~~~g~~~H~~p~~~v~~G~S~nD~v~Ta~~L~lr~~l 155 (468)
T TIGR00839 76 DEILNNGKCHDQFPVDVYQGGAGTSVNMNTNEVIANLALELMGHQKGEYQYLNPNDHVNKSQSTNDAYPTGFRIAVYSSL 155 (468)
T ss_pred HHHHhcccccccccccHHHccCccccccchHHHHHHHHHHHhCccccCeeecCCCCCCCCCCChhhHHHHHHHHHHHHHH
Confidence 88754 222345665542 46677654 888999999 78999995 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCC
Q 016801 183 DTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGL 262 (382)
Q Consensus 183 ~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~ 262 (382)
..+.+.|..|+++|.++|++|+|++||||||+|+|||+|||||+++|+++|.|+++||.+++++++.+||||||+ ||++
T Consensus 156 ~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~Av-GT~~ 234 (468)
T TIGR00839 156 IKLVDAINQLRDGFEQKAKEFADILKMGRTQLQDAVPMTLGQEFEAFSILLEEEVKNIKRTAELLLEVNLGATAI-GTGL 234 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCeeeccccCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcce-eCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999898 9999
Q ss_pred CCChHHH-------HHHcCCCCC-CCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cceeecCCCCC
Q 016801 263 PIDRFMT-------AEALEFTAP-MRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVS 331 (382)
Q Consensus 263 ~~~~~~l-------a~~LG~~~~-~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e---~gev~l~~~~~ 331 (382)
++|+++. ++.|||+.+ ..|+++++++||+++|++++++.++++|+|||+||++|+|+| +|||.+| .++
T Consensus 235 ~~~~~~~~~v~~~~a~~LGl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~~s~~~~~~~ev~~~-~~~ 313 (468)
T TIGR00839 235 NTPPEYSPLVVKKLAEVTGLPCVPAENLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLP-ELQ 313 (468)
T ss_pred cCChhHHHHHHHHHHHHhCCCCCCCccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceEEeCC-CCC
Confidence 9997655 999999975 579999999999999999999999999999999999999775 7899998 699
Q ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhh
Q 016801 332 TGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 376 (382)
Q Consensus 332 ~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~r 376 (382)
+||||||||+||+.+|.++++|+++.|+..+++.+.++.+++++.
T Consensus 314 ~gSS~MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~ 358 (468)
T TIGR00839 314 AGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTLAAEAGQLQLNV 358 (468)
T ss_pred CCCCCCCCCcCcHHHHHHHHHHHHHHhHHHHHHHHHhcCChHhhh
Confidence 999999999999999999999999999999999988998888764
No 22
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=4.1e-70 Score=556.86 Aligned_cols=323 Identities=25% Similarity=0.288 Sum_probs=294.2
Q ss_pred hccccCccccccccCCCCcchHHHHHhcccc-ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhh
Q 016801 50 LCKMSASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIE 128 (382)
Q Consensus 50 ~~~~~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~ 128 (382)
++.+++|+ ..|||++ +++.+.+|+.+ -.++..++++++.+++||+++|++.|+||++++++|.++|+++..+..
T Consensus 7 ~~~~~~~~-~~~~g~~----~~~~~~~~~~~~~~~~~~~i~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~i~~~~~ 81 (450)
T cd01596 7 LGEVEVPA-DAYYGAQ----TQRALENFPISGERMPPELIRALALVKKAAALANAELGLLDEEKADAIVQACDEVIAGKL 81 (450)
T ss_pred CCCCCCcc-cccccHh----HHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcc
Confidence 34568999 7799996 89999999876 456789999999999999999999999999999999999999976544
Q ss_pred cCCccccc----CCcchhHHHHH----HHHHHhC-CCCce--------eccCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016801 129 AGKFMWRT----DREDVHMNIEA----ALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRDAIDTIVRSIQR 191 (382)
Q Consensus 129 ~~~f~~~~----~~~dv~~a~e~----~l~e~~G-~~g~~--------lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~ 191 (382)
++.|+.+. ..+|+|+++|. .+.+.+| ..|+| +|+|+||||+++|+++|++|+.+..+.+.|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~h~~~~v~h~g~SrnD~v~t~~~L~lr~~l~~l~~~l~~ 161 (450)
T cd01596 82 DDQFPLDVWQTGSGTSTNMNVNEVIANRALELLGGKKGKYPVHPNDDVNNSQSSNDDFPPAAHIAAALALLERLLPALEQ 161 (450)
T ss_pred cCCCcccHHhccCcccccchHHHHHHHHHHHHhccccCCcccCCCcccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56776654 36788877664 4446778 45777 66999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHH---
Q 016801 192 LQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFM--- 268 (382)
Q Consensus 192 L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~--- 268 (382)
|+++|.++|++|+|++||||||+|+|||+|||||+++|+++|.|+++||..++++++.+||||||+ ||++++|+++
T Consensus 162 l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGg~A~-Gt~~~~~~~~~~~ 240 (450)
T cd01596 162 LQDALDAKAEEFADIVKIGRTHLQDAVPLTLGQEFSGYAAQLARDIARIEAALERLRELNLGGTAV-GTGLNAPPGYAEK 240 (450)
T ss_pred HHHHHHHHHHHhcCCeeeccccccCCeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcce-eCCCCCChhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999898 9999999765
Q ss_pred ----HHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccceeecCCCCCCCCCCCCCC
Q 016801 269 ----TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVSTGSSIMPQK 340 (382)
Q Consensus 269 ----la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~---e~gev~l~~~~~~GSSiMP~K 340 (382)
+|+.|||+. +..|.++|+++||++++++++++.++++|+|||+||++|+|+ |||||.+|+ +++||||||||
T Consensus 241 v~~~~a~~LGl~~~~~~n~~d~~~~rd~~~e~~~~la~~~~~l~ria~Dl~~~ss~~~~e~gev~~~~-~~~GSS~MPqK 319 (450)
T cd01596 241 VAAELAELTGLPFVTAPNLFEATAAHDALVEVSGALKTLAVSLSKIANDLRLLSSGPRAGLGEINLPA-NQPGSSIMPGK 319 (450)
T ss_pred HHHHHHHHhCCCCccCcCHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCeeEECCC-CCCCCCCCCCC
Confidence 799999995 778999999999999999999999999999999999999965 699999987 89999999999
Q ss_pred CCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhc
Q 016801 341 KNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQ 379 (382)
Q Consensus 341 ~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~q 379 (382)
|||+.+|.++++++++.|+..+++...++.|++++.+.+
T Consensus 320 rNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~e~~~~~~ 358 (450)
T cd01596 320 VNPVIPEAVNMVAAQVIGNDTAITMAGSAGQLELNVFKP 358 (450)
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHhhcCcccccchhh
Confidence 999999999999999999999999999999998877654
No 23
>COG0114 FumC Fumarase [Energy production and conversion]
Probab=100.00 E-value=3.9e-70 Score=529.21 Aligned_cols=318 Identities=23% Similarity=0.292 Sum_probs=292.7
Q ss_pred Cchhhhccc---cCccccccccCCCCcchHHHHHhcccc-ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 016801 45 KHKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGL 120 (382)
Q Consensus 45 ~~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al 120 (382)
.+|+|+|.| ++|+ ++|||.| |+|.+++|+.+ ..+++.+++++..+|+|+|++|.++|.||++.+++|.+++
T Consensus 2 ~~R~E~Dt~G~i~Vpa-d~~wgAQ----TqRs~~nF~ig~~~mp~~~I~Al~~lKkaaA~~N~~LG~L~~~~a~aI~~Aa 76 (462)
T COG0114 2 TYRIEHDTMGEVEVPA-DALWGAQ----TQRSLENFPIGGEKMPREIIRALGLLKKAAAQVNADLGLLDPEKADAIIAAA 76 (462)
T ss_pred CcccccccCccccccH-HHHHHHH----HHHHHhcCCcccccCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 468888877 8899 9999999 99999999987 5589999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCcccc---cC-CcchhH-HHH---HHHHHHhC-CCCc--------eeccCCChhhHHHHHHHHHHHHHHH
Q 016801 121 DEIERQIEAGKFMWR---TD-REDVHM-NIE---AALTDIIG-EPAK--------KLHTARSRNDQVLTDFRLWCRDAID 183 (382)
Q Consensus 121 ~~i~~~~~~~~f~~~---~~-~~dv~~-a~e---~~l~e~~G-~~g~--------~lH~G~SsnDi~~Ta~~L~lr~~l~ 183 (382)
++|+.++++++||++ +| ++..|| +|| +++.+.+| +.|. +|.+||||||++|||+++....++.
T Consensus 77 dev~~Gk~d~~FPl~VwQTGSGTqsNMN~NEVIanrA~e~~gg~~g~~~~VHPNDhVN~sQSSNDtfPTAmhIAa~~~v~ 156 (462)
T COG0114 77 DEVLAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAVV 156 (462)
T ss_pred HHHHcCcccCCCCeEEEecCCCccccccHHHHHHHHHHHHhCcccCCCCCCCCCCcCCcccccCcchhhHHHHHHHHHHH
Confidence 999999999999864 44 455443 566 78888888 4442 3449999999999999999999996
Q ss_pred -HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCC
Q 016801 184 -TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGL 262 (382)
Q Consensus 184 -~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~ 262 (382)
+|++.|+.|+++|.+|+++|.+++++||||+|||.|+||||+|++|+.+|.+..+|++.+.+.+..+++||+|+ |||+
T Consensus 157 ~~LiPaL~~L~~~L~~Ka~~~~~iVKiGRTHLqDAtPlTlGQE~sGy~~ql~~~~~~i~~~l~~l~eLAiGGTAV-GTGl 235 (462)
T COG0114 157 NRLIPALKHLIKTLAAKAEEFADVVKIGRTHLQDATPLTLGQEFSGYAAQLEHALERIEASLPHLYELAIGGTAV-GTGL 235 (462)
T ss_pred HHhHHHHHHHHHHHHHHHHHHhhhhhcCcccccccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCccc-ccCc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCChH-------HHHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cceeecCCCCC
Q 016801 263 PIDRF-------MTAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVS 331 (382)
Q Consensus 263 ~~~~~-------~la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e---~gev~l~~~~~ 331 (382)
|.+++ ++++.+|+.+ +.+|.|.+.+++|.+++++++|..+|++|.|||||||||.|+| +||+.+| +.+
T Consensus 236 Na~p~f~ekva~~i~~~TG~~F~~a~NkF~al~~hd~lv~~~Gal~~lA~~L~KIAnDiR~l~SGPr~GLgEi~lP-ene 314 (462)
T COG0114 236 NAHPEFGEKVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALRTLAVSLMKIANDIRWLGSGPRCGLGEIELP-ENE 314 (462)
T ss_pred CCCccHHHHHHHHHHHHhCCCcccCCcHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccC-CCC
Confidence 99874 4889999996 6899999999999999999999999999999999999999999 7999997 789
Q ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcC
Q 016801 332 TGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKG 369 (382)
Q Consensus 332 ~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~ 369 (382)
+||||||+|+||++||.+.++|.||+|+++++..+...
T Consensus 315 PGSSIMPGKVNPtq~EA~tmv~~QV~Gnd~ai~~ags~ 352 (462)
T COG0114 315 PGSSIMPGKVNPTQCEALTMVAAQVIGNDAAIAFAGSQ 352 (462)
T ss_pred CCccCCCCCCCchhHHHHHHHHHHHHcchHHHHHhhcc
Confidence 99999999999999999999999999999999877544
No 24
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.2e-70 Score=525.55 Aligned_cols=322 Identities=25% Similarity=0.287 Sum_probs=298.5
Q ss_pred CCchhhhccc---cCccccccccCCCCcchHHHHHhcccc-cccc--HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 016801 44 PKHKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISYD--KALYKHDIMGSKAHASMLAKQGLISDSDKNSIL 117 (382)
Q Consensus 44 ~~~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d--~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~ 117 (382)
..+|+|+|-+ ++|. +.|||-+ |.|++++|+++ ...+ ..|+++++.||+|+|.+|.|+|.||++.+++|.
T Consensus 2 ~~~R~E~D~lGe~~ip~-evYyGI~----TlRA~eNF~Is~~~~~~~p~~i~a~~~VKKAaAlaN~elg~l~~~~~~aIv 76 (471)
T COG1027 2 TDMRIERDLLGEREIPA-EVYYGIH----TLRAVENFPISGLKISDVPEFIRAMAMVKKAAALANKELGALPKEIADAIV 76 (471)
T ss_pred CcchhhhhhcccccCcc-hhhhhhH----HHHHHhcCCCcCCcccccHHHHHHHHHHHHHHHHhhhhhCCCCHHHHHHHH
Confidence 3567777755 8898 8999998 89999999987 4444 799999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCccccc---C-CcchhH-HHH---HHHHHHhC-CCCce--ec------cCCChhhHHHHHHHHHHHH
Q 016801 118 RGLDEIERQIEAGKFMWRT---D-REDVHM-NIE---AALTDIIG-EPAKK--LH------TARSRNDQVLTDFRLWCRD 180 (382)
Q Consensus 118 ~al~~i~~~~~~~~f~~~~---~-~~dv~~-a~e---~~l~e~~G-~~g~~--lH------~G~SsnDi~~Ta~~L~lr~ 180 (382)
+||++|+.++..++|++++ | ++++|| +|| ++..|++| +.|+| +| ++||+||++||+++|.+..
T Consensus 77 ~ACDeil~Gk~~dqFvvD~~QGGAGTS~NMN~NEVIAN~AlE~lG~~KGeY~~~hPndhVNmsQSTND~yPTa~ria~~~ 156 (471)
T COG1027 77 KACDEILDGKCHDQFVVDVYQGGAGTSTNMNANEVIANRALELLGHEKGEYQYLHPNDHVNMSQSTNDAYPTAFRIAVYK 156 (471)
T ss_pred HHHHHHHcCccccccceeccccCCCccccccHHHHHHHHHHHHhcCCCCceeeeCCccccchhhcccccchhHHHHHHHH
Confidence 9999999998899999876 3 667765 677 88899999 77876 44 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCC
Q 016801 181 AIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGT 260 (382)
Q Consensus 181 ~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt 260 (382)
.+..|.+.+..|++++..|++||+|++++||||+|||+|||+|++|.+|+..|.||+.||..+.+++..++|||+|+ ||
T Consensus 157 ~l~~L~~al~~L~~af~~Ka~EF~~ilKmGRTqLQDAvPmtlGqEF~Afa~~l~ed~~ri~~~~~~l~evNlGgTAi-GT 235 (471)
T COG1027 157 SLRKLIDALEDLIEAFERKAKEFADILKMGRTQLQDAVPMTLGQEFGAFAVALKEDIKRIYRAAELLLEVNLGGTAI-GT 235 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcChhhhcccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCceee-cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCCCChHH-------HHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cceeecCCC
Q 016801 261 GLPIDRFM-------TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDS 329 (382)
Q Consensus 261 ~~~~~~~~-------la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e---~gev~l~~~ 329 (382)
|.+.+++| +++.+|++. +++|.++++++.|.+++++++++.+|+.|+||||||||++|+| +|||.+| +
T Consensus 236 GiNa~~~Y~~~vv~~l~evtg~~~~~A~~Lieatq~~~afv~vsg~lk~~Av~LsKI~NDlRLLsSGPr~Gl~EI~LP-~ 314 (471)
T COG1027 236 GINAPKGYIELVVKKLAEVTGLPLVPAENLIEATQDTGAFVMVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLP-A 314 (471)
T ss_pred CcCCChhHHHHHHHHHHHHhCCCCccchhHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccCcccccCC-C
Confidence 99998754 999999994 7899999999999999999999999999999999999999999 8999997 7
Q ss_pred CCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCc
Q 016801 330 VSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL 372 (382)
Q Consensus 330 ~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~ 372 (382)
.|+||||||+|+||+++|.+.++|.+|+|++.++.++.+.--+
T Consensus 315 ~Q~GSSIMPgKVNPVipEvvnQvcf~ViGnD~tit~AaeaGQL 357 (471)
T COG1027 315 VQAGSSIMPGKVNPVIPEVVNQVCFKVIGNDTTITMAAEAGQL 357 (471)
T ss_pred CCCCCCCCCCCcCchhHHHHHHHHHHHhcchHHHHHHHHhcch
Confidence 9999999999999999999999999999999999998775433
No 25
>PRK02186 argininosuccinate lyase; Provisional
Probab=100.00 E-value=1.9e-69 Score=593.82 Aligned_cols=311 Identities=32% Similarity=0.417 Sum_probs=290.5
Q ss_pred hHHHHHhccc--cccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCCcchhHHHHH
Q 016801 70 VTDAVEKFTE--SISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEA 147 (382)
Q Consensus 70 ~~~~~~~f~~--~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~~dv~~a~e~ 147 (382)
|..++..|.. ...-+.+.+++++.+++||++|++++|+||++++++|.+++.++.... ...+..++..+|+|+++|+
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ah~~~l~~~gii~~~~a~~I~~~l~~~~~~~-~~~~~~~~~~~~~~~~~e~ 496 (887)
T PRK02186 418 PPEAQAIVYGPGASEAPLAELDHLAAIDEAHLVMLGDTGIVAPERARPLLDAHRRLRDAG-FAPLLARPAPRGLYMLYEA 496 (887)
T ss_pred ChhhhceecCCCcchhhhhhhHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHhH-HhhCcCCCCCcchHHHHHH
Confidence 4555555542 234457899999999999999999999999999999999998885432 2356666667889999999
Q ss_pred HHHHHhC-CCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHH
Q 016801 148 ALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLL 226 (382)
Q Consensus 148 ~l~e~~G-~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~ 226 (382)
.|.+++| +.++|+|+|+||||+++|+++|++|+.+..|.+.|..|+++|.++|++|+|++||||||+|||||||||||+
T Consensus 497 ~L~~~~g~~~~~~lH~grSrnD~v~T~~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~g~TH~Q~A~P~T~G~~~ 576 (887)
T PRK02186 497 YLIERLGEDVGGVLQTARSRNDINATTTKLHLREATSRAFDALWRLRRALVFKASANVDCALPIYSQYQPALPGSLGHYL 576 (887)
T ss_pred HHHHHhChhhhcccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEeecCccCCccccccHHHHH
Confidence 9999999 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHH
Q 016801 227 LAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHL 306 (382)
Q Consensus 227 ~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L 306 (382)
++|+++|.||++||.+++++++.+||||++++||++++|++++|++|||..+..|+++|+++||+++|++++++.++++|
T Consensus 577 ~~~~~~l~r~~~rl~~~~~r~~~~plG~aag~gt~~~~~~~~~a~~LGf~~~~~n~~da~~~rd~~~e~~~~l~~~~~~l 656 (887)
T PRK02186 577 LAVDGALARETHALFALFEHIDVCPLGAGAGGGTTFPIDPEFVARLLGFEQPAPNSLDAVASRDGVLHFLSAMAAISTVL 656 (887)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCHHHHHHHcCCCCCccCHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh-ccC
Q 016801 307 SRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL-QTG 381 (382)
Q Consensus 307 ~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~-qe~ 381 (382)
+|||+||++|++.|||||.+|+++++|||||||||||+.+|.++++|+++.|+..++++..+++|++|+.|. |++
T Consensus 657 ~ria~Dl~~~~~~e~g~i~~~~~~~~gSSiMPqKrNP~~~E~ir~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 732 (887)
T PRK02186 657 SRLAQDLQLWTTREFALVSLPDALTGGSSMLPQKKNPFLLEFVKGRAGVVAGALASASAALGKTPFSNSFEAGSPM 732 (887)
T ss_pred HHHHHHHHHHhCCCCCcEECCCccccccCCCCCCCCCcHHHHHHHHHHHHhhHHHHHHHHHccCCcccccchhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999998884 775
No 26
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like. This group contains ASL, prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). pCMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone, in the beta-ketoadipate pathway. ASL deficiency has been linked t
Probab=100.00 E-value=3.2e-70 Score=548.94 Aligned_cols=293 Identities=27% Similarity=0.263 Sum_probs=265.6
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccc-cCCcchhHHHHHHHHHHhCC-CCc
Q 016801 81 ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWR-TDREDVHMNIEAALTDIIGE-PAK 158 (382)
Q Consensus 81 ~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~-~~~~dv~~a~e~~l~e~~G~-~g~ 158 (382)
++.|.+++++++++++||++++++.|+||++++++|.++++.+..+... -+... ..+||+ +++|+.+.+++|+ .++
T Consensus 4 ~~s~~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~l~~~~~d~~~-~~~~~~~~~~~v-~~~e~~L~~~~g~~~~~ 81 (381)
T cd01595 4 IFSEENKLRTWLDVEAALAEAQAELGLIPKEAAEEIRAAADVFEIDAER-IAEIEKETGHDV-IAFVYALAEKCGEDAGE 81 (381)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhcccCCHHH-HHHHHHHhCcCc-HHHHHHHHHHhhhHhhh
Confidence 3456799999999999999999999999999999999998876322211 11222 247888 9999999999995 899
Q ss_pred eeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHH
Q 016801 159 KLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAG 238 (382)
Q Consensus 159 ~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~ 238 (382)
|+|+|+||||+++|+++|++|+.+..+.+.|.+|+++|.++|++|+|++||||||+|||||||||||+++|+++|.|+++
T Consensus 82 ~vH~g~S~nDi~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~dt~m~grTH~Q~A~P~T~G~~~~~~~~~L~r~~~ 161 (381)
T cd01595 82 YVHFGATSQDINDTALALQLRDALDIILPDLDALIDALAKLALEHKDTPMLGRTHGQHALPTTFGKKFAVWAAELLRHLE 161 (381)
T ss_pred HeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHhhcCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCcccccCCCC----CCChHHHHHHcCCCCCCCCchhhcc-chHHHHHHHHHHHHHHHHHHHHHHHH
Q 016801 239 RLQDCRVRMNFCPLGACALAGTGL----PIDRFMTAEALEFTAPMRNSIDAVS-DRDFVLEFLSANSIIAIHLSRLGEEW 313 (382)
Q Consensus 239 rL~~~~~~~~~~~lGggA~aGt~~----~~~~~~la~~LG~~~~~~n~~~~~~-~rD~~~e~~~~l~~la~~L~kia~Dl 313 (382)
||.+++++++.+||||++.+|+++ +.+++++++.|||.. |.++|+. +||+++|++++++.++++|+|||+||
T Consensus 162 rL~~~~~~~~~~~lGga~G~g~~~~~~~~~~~~~~a~~LGl~~---~~~~~~~~~rd~~~e~~~~l~~~~~~l~ria~Dl 238 (381)
T cd01595 162 RLEEARERVLVGGISGAVGTHASLGPKGPEVEERVAEKLGLKV---PPITTQIEPRDRIAELLSALALIAGTLEKIATDI 238 (381)
T ss_pred HHHHHHHhchhhhcccHhhhHhhcCCcHHHHHHHHHHHcCCCC---CCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999876666666 667899999999963 3466755 99999999999999999999999999
Q ss_pred HHhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhccC
Q 016801 314 VLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQTG 381 (382)
Q Consensus 314 ~llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe~ 381 (382)
++|+|.|||||.+|+ ++++||||||||+||+.+|.++++|+++.|+..+++..+ |++|+||+|+.
T Consensus 239 ~~~~s~e~gev~~~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~---~~~~erd~~~~ 304 (381)
T cd01595 239 RLLQRTEIGEVEEPFEKGQVGSSTMPHKRNPIDSENIEGLARLVRALAAPALENL---VQWHERDLSDS 304 (381)
T ss_pred HHHHhccccceeccccCCCCCCccCCCcCCcHHHHHHHHHHHHHHHHHHHHHHhh---hHhhccCCcHH
Confidence 999999999999986 789999999999999999999999999999999999885 99999999863
No 27
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=8.8e-69 Score=539.16 Aligned_cols=290 Identities=22% Similarity=0.264 Sum_probs=261.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCCcchhHHHHHHHHHHhCCCCceecc
Q 016801 83 YDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHT 162 (382)
Q Consensus 83 ~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G~~g~~lH~ 162 (382)
.|..++++++.+++||++++.++|+||++++++|.++++.+..... .+. ...+||+ +++|+.+.+++|+.++|+|+
T Consensus 12 s~~~~~~~~l~ve~A~a~~l~~~Glip~~~a~~I~~~l~~~~~~~~--~~~-~~~~~dv-~~~e~~L~~~~g~~~~~lH~ 87 (387)
T cd01360 12 SEENKFRKWLEVEAAVCEAWAKLGVIPAEAAEEIRKKAKFDVERVK--EIE-AETKHDV-IAFVTAIAEYCGEAGRYIHF 87 (387)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhcCHHHHH--HHH-HHhCCCh-HHHHHHHHHHHHHhhhheeC
Confidence 4568999999999999999999999999999999999865433221 111 1236777 78999999999988999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Q 016801 163 ARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQD 242 (382)
Q Consensus 163 G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~ 242 (382)
|+||||+++|+++|++|+.+..+.+.|.+|+++|.++|++|++++||||||+|||||+|||||+++|+++|.|+++||.+
T Consensus 88 G~S~nDi~~ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~l~~~~~~L~r~~~rL~~ 167 (387)
T cd01360 88 GLTSSDVVDTALALQLREALDIILKDLKELLEVLKKKALEHKDTVMVGRTHGIHAEPTTFGLKFALWYAEFKRHLERLKE 167 (387)
T ss_pred CCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeehhhcCCcceeehHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccCCcccccCCCCC-CChHHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 016801 243 CRVRMNFCPLGACALAGTGLP-IDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEF 321 (382)
Q Consensus 243 ~~~~~~~~~lGggA~aGt~~~-~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e~ 321 (382)
++++++.+||||++.+|++++ .+++++++.|||+.+..| +++++||+++|++++++.++++|+|||+||++|++.||
T Consensus 168 ~~~~~~~~~lgga~Gt~~~~~~~~~~~~a~~LG~~~~~~~--~~~~~rD~~~e~~~~la~~~~~L~ria~Dl~~~s~~e~ 245 (387)
T cd01360 168 ARERILVGKISGAVGTYANLGPEVEERVAEKLGLKPEPIS--TQVIQRDRHAEYLSTLALIASTLEKIATEIRHLQRTEV 245 (387)
T ss_pred HHHHhHhhccchHhhcCccCCHHHHHHHHHHcCCCCCCCC--CcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999998765666676 468999999999875433 46799999999999999999999999999999999999
Q ss_pred ceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhccC
Q 016801 322 GFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQTG 381 (382)
Q Consensus 322 gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe~ 381 (382)
|||.+|. ++++||||||||+||+.+|.++++|+.+.|+.. ...+++|++|+||+|+.
T Consensus 246 gel~e~~~~~~~GSS~MPqKrNP~~~E~i~~~a~~~~g~~~---~~~~~~~~~~~rd~~~~ 303 (387)
T cd01360 246 LEVEEPFSKGQKGSSAMPHKRNPILSENICGLARVIRSNVI---PALENVALWHERDISHS 303 (387)
T ss_pred cceecCCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHHHHH---HHHhhhHHhcCCCcchh
Confidence 9998764 577999999999999999999999999999986 45578999999999974
No 28
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase. Members of this family are 3-carboxy-cis,cis-muconate cycloisomerase, the enzyme the catalyzes the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=1.5e-68 Score=528.48 Aligned_cols=288 Identities=25% Similarity=0.283 Sum_probs=255.4
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcc-cccCCcchhHHHHHHHHHHhC-CCCc
Q 016801 81 ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFM-WRTDREDVHMNIEAALTDIIG-EPAK 158 (382)
Q Consensus 81 ~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~-~~~~~~dv~~a~e~~l~e~~G-~~g~ 158 (382)
++.|.+++++++.||+||+++|+++|+||++.+++|.++|+++..+.. ++. ......+.++++|+.+.+.+| +.|+
T Consensus 14 i~sd~~~i~~~~~ve~A~a~al~~~Gii~~~~a~~I~~a~~~~~~d~~--~~~~~~~~~~~~~~~~~~~l~~~~g~~~g~ 91 (338)
T TIGR02426 14 LFSDRAFLRAMLDFEAALARAQADAGLIPAEAAAAIEAACAAAAPDLE--ALAHAAATAGNPVIPLVKALRKAVAGEAAR 91 (338)
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhccCCCCHH--HHHhHHHhcCCcHHHHHHHHHHHhCccccC
Confidence 445679999999999999999999999999999999999987632211 000 001123334688999999999 6899
Q ss_pred eeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHH
Q 016801 159 KLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAG 238 (382)
Q Consensus 159 ~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~ 238 (382)
|||+|+||||+++|+++|++|+.+..+.+.+.+|+++|.++|++|+|++||||||+|||||+||||||++|+++|.|+++
T Consensus 92 ~vH~G~S~nD~~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G~~l~~~~~~l~r~~~ 171 (338)
T TIGR02426 92 YVHRGATSQDVIDTSLMLQLRDALDLLLADLGRLADALADLAARHRDTPMTGRTLLQQAVPTTFGLKAAGWLAAVLRARD 171 (338)
T ss_pred cccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceecccCCCcCeehhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCcccccCCC-----CCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 016801 239 RLQDCRVRMNFCPLGACALAGTG-----LPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEW 313 (382)
Q Consensus 239 rL~~~~~~~~~~~lGggA~aGt~-----~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl 313 (382)
||.+++++++.+||||++.+|++ +++ ++++++.|||+.+.. +|+++||+++|++++++.++++|+|||+||
T Consensus 172 rL~~~~~~~~~~~lGgavGtg~~~~~~~~~v-~~~~a~~LGl~~~~~---~~~~~rd~~~e~~~~l~~la~~l~ria~Dl 247 (338)
T TIGR02426 172 RLAALRTRALPLQFGGAAGTLAALGTRGGAV-AAALAARLGLPLPAL---PWHTQRDRIAEFGSALALVAGALGKIAGDI 247 (338)
T ss_pred HHHHHHHHhHhcCCcchhccCCCccchHHHH-HHHHHHHhCcCCCCC---cchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999985544443 223 689999999997653 378999999999999999999999999999
Q ss_pred HHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhc
Q 016801 314 VLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQ 379 (382)
Q Consensus 314 ~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~q 379 (382)
++|+++||||+.+ ++++||||||||+||+.+|.++++|+++.|+..+++.. .+.+|+||.-
T Consensus 248 ~l~s~~e~gei~~--~~~~GSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~---~~~~~Er~~~ 308 (338)
T TIGR02426 248 ALLSQTEVGEVFE--AGGGGSSAMPHKRNPVGAALLAAAARRVPGLAATLHAA---LPQEHERSLG 308 (338)
T ss_pred HHHhcCCCChhhh--CCCCCcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHh---chHhhccCCC
Confidence 9999999999987 56899999999999999999999999999999988776 8899999964
No 29
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.
Probab=100.00 E-value=3.1e-68 Score=543.34 Aligned_cols=288 Identities=24% Similarity=0.265 Sum_probs=258.9
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCCcch--hHHHHHHHHHHhC-CCCc
Q 016801 82 SYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDV--HMNIEAALTDIIG-EPAK 158 (382)
Q Consensus 82 ~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~~dv--~~a~e~~l~e~~G-~~g~ 158 (382)
+.|.+++++++.||+||+++|.++|+||++++++|.++++++..+. +.+. ....++. +.++|..+.+++| +.|+
T Consensus 15 ~s~~~~i~~~~~ve~A~a~~l~~~Gii~~~~a~~I~~al~~~~~~~--~~~~-~~~~~~~~~v~a~e~~l~e~~g~~~g~ 91 (437)
T cd01597 15 FSDENRVQAMLDVEAALARAQAELGVIPKEAAAEIAAAADVERLDL--EALA-EATARTGHPAIPLVKQLTAACGDAAGE 91 (437)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhccccCCCH--HHHH-HHHHHhCCCcHHHHHHHHHHcCccccC
Confidence 3456999999999999999999999999999999999987762111 1121 1112223 3689999999999 5699
Q ss_pred eeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHH
Q 016801 159 KLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAG 238 (382)
Q Consensus 159 ~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~ 238 (382)
|+|+|+||||+++|+++|++|+.+..+.+.|..|+++|.++|++|+|++||||||+|||||+||||||++|+++|.|+++
T Consensus 92 ~lH~grSrnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~ 171 (437)
T cd01597 92 YVHWGATTQDIIDTALVLQLRDALDLLERDLDALLDALARLAATHRDTPMVGRTHLQHALPITFGLKVAVWLSELLRHRE 171 (437)
T ss_pred eeecCccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeehhhcCccceechHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCcccccCCCCCCC----hHHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016801 239 RLQDCRVRMNFCPLGACALAGTGLPID----RFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWV 314 (382)
Q Consensus 239 rL~~~~~~~~~~~lGggA~aGt~~~~~----~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ 314 (382)
||..++++++.+||||++.+|+.++.+ ++++++.|||+.+. .+|+++||++++++++++.++++|+|||+||+
T Consensus 172 rL~~~~~~~~~~~lGga~Gtg~~~~~~~~~~~~~~a~~LGf~~~~---~~~~~~rd~~~e~~~~l~~~a~~l~rla~Dl~ 248 (437)
T cd01597 172 RLDELRPRVLVVQFGGAAGTLASLGDQGLAVQEALAAELGLGVPA---IPWHTARDRIAELASFLALLTGTLGKIARDVY 248 (437)
T ss_pred HHHHHHHhhhhhccccccccccccCCcHHHHHHHHHHHcCCCCCC---CccccCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988777777764 78999999999765 35689999999999999999999999999999
Q ss_pred HhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 315 LWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 315 llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
+|++.||||+.+|+ ++++||||||||+||+.+|.++++|.+++|+..+++.. ...+|+||+
T Consensus 249 l~s~~e~gel~~~~~~~~~GSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~---~~~~~erd~ 310 (437)
T cd01597 249 LLMQTEIGEVAEPFAKGRGGSSTMPHKRNPVGCELIVALARRVPGLAALLLDA---MVQEHERDA 310 (437)
T ss_pred HHhccccceeecccCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHh---chhhcccCC
Confidence 99999999999986 68999999999999999999999999999998877765 448999998
No 30
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F ....
Probab=100.00 E-value=1.9e-68 Score=523.05 Aligned_cols=294 Identities=37% Similarity=0.511 Sum_probs=260.8
Q ss_pred CCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhh-cCCcccccCCcchhH
Q 016801 65 RFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIE-AGKFMWRTDREDVHM 143 (382)
Q Consensus 65 ~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~-~~~f~~~~~~~dv~~ 143 (382)
||..++++....|+.+..+|..+.++++.+++|+++|+++.|+||++.+++|.++|+++..+.. .+.|+++...+++|.
T Consensus 2 r~~~~~~~~~~~~s~~~~~~~~l~~~~~~~e~a~~~a~a~~g~i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (312)
T PF00206_consen 2 RYEVPTDEMYAIFSDRARFDFWLAEYDIRVEAALAKALAEAGIIPKEAADAIVKALEEILEDGDLDDAFELDEIEEDIGH 81 (312)
T ss_dssp EEEEETTHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHTCTHGHHHHCSCSSSHHH
T ss_pred CcCCchHHHHHHHCHHHHhCCEeeccHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhccccccchhhhhccchh
Confidence 4555567777778776666666666777799999999999999999999999999999998533 336777776677766
Q ss_pred HHHHHHHHHhC-------CCCceeccCCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccccccc
Q 016801 144 NIEAALTDIIG-------EPAKKLHTARSRNDQVLTDFRLWCRDAI-DTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQ 215 (382)
Q Consensus 144 a~e~~l~e~~G-------~~g~~lH~G~SsnDi~~Ta~~L~lr~~l-~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ 215 (382)
.++..+.+.+| +.++|+|+|+||||+++|+++|++|+.+ ..|.+.|..|+++|.++|++|++|+||||||+|
T Consensus 82 ~~~~~l~~~~~e~~~~~~~~~~~vH~G~Ts~Di~~Ta~~l~lr~~~~~~l~~~l~~l~~~L~~~a~~~~~t~~~grTh~Q 161 (312)
T PF00206_consen 82 AVEANLNEVLGELLGEPPEAGGWVHYGRTSNDIVDTALRLQLRDALLELLLERLKALIDALAELAEEHKDTPMPGRTHGQ 161 (312)
T ss_dssp HHHHHHHHHHHHHHTHSSGGGGGTTTT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEETTE
T ss_pred HHHHHHHHHhhhhhhccccccccccCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcCceeccccccc
Confidence 66655555544 7889999999999999999999999999 569999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChH---HHHHHcC-CCC---CCCCchhhccc
Q 016801 216 RAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRF---MTAEALE-FTA---PMRNSIDAVSD 288 (382)
Q Consensus 216 ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~---~la~~LG-~~~---~~~n~~~~~~~ 288 (382)
||+|||||+||++|+++|.|+++||++++++++.+|||||+.+||++++|++ .+++.|| |.. +..|..+|+++
T Consensus 162 ~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgga~g~gt~~~~~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~ 241 (312)
T PF00206_consen 162 PAQPTTFGHKLAAWADELARDLERLEEARKRLNVSPLGGAVGAGTSLGIDREFQERVAEELGEFTGLGVPAPNWHDAVSS 241 (312)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEETTTTTTTSSHTTSHHHHHHHHHHHHHHHHCSTEECSSHHHHHHC
T ss_pred cccceeHHHHHHHHHHHHHHHHHHHHHhHhHHHHHhccCCCccccccccCcchhhhHHhhhhhhhhcccchhhccccccc
Confidence 9999999999999999999999999999999999999998888999999987 8999998 655 77888999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHh
Q 016801 289 RDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIG 358 (382)
Q Consensus 289 rD~~~e~~~~l~~la~~L~kia~Dl~llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G 358 (382)
||++++++++++.++++|+|||+||++|+++|+||+++|. ..++|||+||||+||+.+|.++++|++|+|
T Consensus 242 rd~~~e~~~~l~~l~~~l~kia~Dl~~~~s~e~g~~~~~~~~~~~GSS~MP~K~NP~~~E~i~~~a~~v~G 312 (312)
T PF00206_consen 242 RDRLAELASALALLAGTLSKIAEDLRLLSSTEIGEVEEPFPEGQVGSSIMPHKRNPVILENIRGLARQVIG 312 (312)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTSSEEEEGGGSSSCSSSSTTCEETHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeecccccccCCCccCCCCCCCHHHHHHHHhhhcCcC
Confidence 9999999999999999999999999999999999999874 456699999999999999999999999987
No 31
>PRK08470 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.8e-67 Score=537.21 Aligned_cols=285 Identities=22% Similarity=0.293 Sum_probs=252.6
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HHHHHhhcCCcccccCCcchhHHHHHHHHHHhCCCCceec
Q 016801 83 YDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLD-EIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLH 161 (382)
Q Consensus 83 ~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~-~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G~~g~~lH 161 (382)
.|.+.+++++.|++||+++++++|+||++.+++|.++++ ++..- .... ...+||+ .++++.+.+.+|+.++|||
T Consensus 15 s~~~~~~~~l~ve~A~a~al~~~G~Ip~~~a~~I~~~~~~d~~~~---~~~~-~~~~~dv-~~~v~~L~e~~g~~~~~vH 89 (442)
T PRK08470 15 TMQAKYDAWLEVEKAAVKAWNKLGLIPDSDCEKICKNAKFDIARI---DEIE-KTTKHDL-IAFLTSVSESLGEESRFVH 89 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccchHHH---HHHH-HccCCCh-HHHHHHHHHHcccccccee
Confidence 456899999999999999999999999999999998873 12110 0011 2347888 6778999999998899999
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Q 016801 162 TARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQ 241 (382)
Q Consensus 162 ~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~ 241 (382)
+|+||||++||+++|++|+.+..+.+.|..|+++|.++|++|++++||||||+|||+|||||||+++|+++|.|+++||.
T Consensus 90 ~G~TsnDi~dTa~~L~lr~~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~RL~ 169 (442)
T PRK08470 90 YGMTSSDCIDTAVALQMRDSLKLIIEDVKNLMEAIKKRALEHKDTLMVGRSHGIHGEPITFGLVLAIWYDEIKRHLKALE 169 (442)
T ss_pred cCCChhchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecccCCCcCeehhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccCCcccccCCC--CCCC-hHHHHHHcCCCCC-CCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016801 242 DCRVRMNFCPLGACALAGTG--LPID-RFMTAEALEFTAP-MRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWA 317 (382)
Q Consensus 242 ~~~~~~~~~~lGggA~aGt~--~~~~-~~~la~~LG~~~~-~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~lls 317 (382)
+++++++.+|||| |+ ||+ ++.+ ++++++.|||..+ ..| ++++||+++|++++++.++++|+|||+||++|+
T Consensus 170 ~~~~~~~~~~lgG-Av-Gt~a~~~~~v~~~~a~~LGl~~~~~~~---~v~~RD~~~e~~~~La~~a~~L~ria~Di~~l~ 244 (442)
T PRK08470 170 HTMEVISVGKISG-AM-GNFAHAPLELEELVCEELGLKPAPVSN---QVIQRDRYARLASALALLASSCEKIAVAIRHLQ 244 (442)
T ss_pred HHHHHhhhhcCcc-hh-cccccCChHHHHHHHHHcCCCCCCCCC---CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999975 44 443 3333 6889999999954 322 579999999999999999999999999999999
Q ss_pred ccccceeecC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 318 SEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 318 s~e~gev~l~-~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
++||+|+.++ .++++|||||||||||+.+|.++++|+++.|+. ...++|+|++|+||+|.
T Consensus 245 ~~E~~ev~e~~~~g~~GSS~MPhKrNPv~~E~i~~~a~~~~~~~---~~~~~~~~~~~eRD~~~ 305 (442)
T PRK08470 245 RTEVYEAEEYFSKGQKGSSAMPHKRNPVLSENITGLCRVIRSFA---TPALENVALWHERDISH 305 (442)
T ss_pred ccccceecccCCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHH---HHHHHhchHhhccCCch
Confidence 9999999875 467899999999999999999999999999996 45567799999999985
No 32
>PRK07492 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1e-66 Score=530.13 Aligned_cols=289 Identities=21% Similarity=0.236 Sum_probs=255.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCCcchhHHHHHHHHHHhCCCCceecc
Q 016801 83 YDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHT 162 (382)
Q Consensus 83 ~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G~~g~~lH~ 162 (382)
.|...++.+++||.|++++++++|+||++.+++|.+++.....+...-.-.....+||+ .++|+.+.+.+|+.++|||+
T Consensus 15 s~~~~~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~~~~~~d~~~~~~~~~~~~h~v-~a~~~~L~~~~g~~~~~vH~ 93 (435)
T PRK07492 15 EPETKFRIWFEIEAHACEAQAELGVIPKEAAETIWEKGKDAEFDVARIDEIEAVTKHDV-IAFLTHLAEFVGPDARFVHQ 93 (435)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCcccCCCHHHHHHHHHHhCCCh-HHHHHHHHHHhhHhhhhhcC
Confidence 34588999999999999999999999999999998775220000000000001136776 78999999999977999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Q 016801 163 ARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQD 242 (382)
Q Consensus 163 G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~ 242 (382)
|+||||++||+++|++|+++..|.+.|.+|+++|.++|++|+|++||||||+|||+|||||+||++|+++|.|+++||.+
T Consensus 94 G~Ts~Di~dTa~~L~lr~~~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~ 173 (435)
T PRK07492 94 GMTSSDVLDTCLNVQLVRAADLLLADLDRVLAALKKRAFEHKDTPTIGRSHGIHAEPTTFGLKLARFYAEFARNRERLVA 173 (435)
T ss_pred CCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEeeccCCccceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccCCcccccCCCCCCCh---HHHHHHcCCCCCCCCchhh-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016801 243 CRVRMNFCPLGACALAGTGLPIDR---FMTAEALEFTAPMRNSIDA-VSDRDFVLEFLSANSIIAIHLSRLGEEWVLWAS 318 (382)
Q Consensus 243 ~~~~~~~~~lGggA~aGt~~~~~~---~~la~~LG~~~~~~n~~~~-~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss 318 (382)
++++++.+||| ||+ ||++++|+ +++++.|||+.+ +.+| +.+||++++++++++.++++|+|||+||++|++
T Consensus 174 ~~~~~~~~~lg-GAv-GT~~~~~~~~~~~~a~~LGl~~~---~~~~~v~~RD~~~e~~~~la~~~~~L~ria~Di~~l~~ 248 (435)
T PRK07492 174 AREEIATCAIS-GAV-GTFANIDPRVEEHVAKKLGLKPE---PVSTQVIPRDRHAMFFATLGVIASSIERLAIEIRHLQR 248 (435)
T ss_pred HHHhhhhccCc-ccc-cCCccCChHHHHHHHHHhCCCCC---CccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999996 566 99999998 789999999863 3455 699999999999999999999999999999999
Q ss_pred cccceeecC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 319 EEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 319 ~e~gev~l~-~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
+||+|+.++ .++++|||+||||+||+.+|.++++++.+.|+. ...++|+|++|+||+|.
T Consensus 249 ~e~~El~e~~~~g~~GSS~MPhKrNP~~~E~i~~~a~~~~~~~---~~~~~~~~~~~eRD~~~ 308 (435)
T PRK07492 249 TEVLEAEEFFSPGQKGSSAMPHKRNPVLTENLTGLARLVRSYV---VPAMENVALWHERDISH 308 (435)
T ss_pred cccchhccccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHH---HHHHHhcchhhccCChH
Confidence 999999864 468899999999999999999999999999995 45667799999999974
No 33
>TIGR00928 purB adenylosuccinate lyase. This family consists of adenylosuccinate lyase, the enzyme that catalyzes step 8 in the purine biosynthesis pathway for de novo synthesis of IMP and also the final reaction in the two-step sequence from IMP to AMP.
Probab=100.00 E-value=1.2e-66 Score=531.33 Aligned_cols=288 Identities=25% Similarity=0.293 Sum_probs=257.6
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCc-ccc-cCCcchhHHHHHHHHHHhCCCCcee
Q 016801 83 YDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKF-MWR-TDREDVHMNIEAALTDIIGEPAKKL 160 (382)
Q Consensus 83 ~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f-~~~-~~~~dv~~a~e~~l~e~~G~~g~~l 160 (382)
.|..++++++.+++||+++++++|+||+++++.|.++ .++.. ...+.+ ... ..+||+ +++|+.+.+.+|+.++|+
T Consensus 15 s~~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~-~~~~~-~d~~~l~~~~~~~~~~v-~~~e~~l~~~~g~~~~~v 91 (435)
T TIGR00928 15 SEENKFKTWLDVEVALLRALAELGVIPAEAVKEIRAK-ANFTD-VDLARIKEIEAVTRHDV-KAVVYALKEKCGAEGEFI 91 (435)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhh-CCCCc-cCHHHHHHHHHHHCcCh-HHHHHHHHHHhhhhhhhe
Confidence 3458999999999999999999999999999999887 21110 000000 011 126777 899999999999889999
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHH
Q 016801 161 HTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRL 240 (382)
Q Consensus 161 H~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL 240 (382)
|+|+||||+++|+++|++|+.+..+.+.|..|+++|.++|++|+|++||||||+||||||||||||++|+++|.|+++||
T Consensus 92 h~g~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL 171 (435)
T TIGR00928 92 HFGATSNDIVDTALALLLRDALEIILPKLKQLIDRLKDLAVEYKDTVMLGRTHGQHAEPTTLGKKFALWADEMKRQLERL 171 (435)
T ss_pred eecccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHhHHhcCCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccccCCcccccCCCCCCCh------HHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016801 241 QDCRVRMNFCPLGACALAGTGLPIDR------FMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWV 314 (382)
Q Consensus 241 ~~~~~~~~~~~lGggA~aGt~~~~~~------~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ 314 (382)
.+++++++.+|+|| ++ ||++++++ +++++.|||+.+.. +. ++++||++++++++++.++++|+|||+||+
T Consensus 172 ~~~~~~~~~~~lgG-a~-Gt~~~~~~~~~~~~~~~a~~LGl~~~~~-~~-~~~~rD~~~e~~~~l~~la~~L~ria~Dl~ 247 (435)
T TIGR00928 172 LQAKERIKVGGISG-AV-GTHAAAYPLVEEVEERVTEFLGLKPVPI-ST-QIEPRDRHAELLDALALLATTLEKFAVDIR 247 (435)
T ss_pred HHHHHHhHhhcccc-hh-hhHhhccccHHHHHHHHHHhcCCCCCCC-Cc-cccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999975 65 99999988 89999999998763 33 789999999999999999999999999999
Q ss_pred HhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 315 LWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 315 llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
+|++.||+|+.+|. ++++||||||||+||+.+|.++++|.++.|+..+++. ++|++|+||+|+
T Consensus 248 l~s~~~~~el~~~~~~~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~---~~~~~~erd~~~ 311 (435)
T TIGR00928 248 LLQRTEHFEVEEPFGKGQVGSSAMPHKRNPIDFENVCGLARVIRSVLSPALE---NVPLWHERDLTD 311 (435)
T ss_pred HHHhccccceecccCCCCCCcCCCCcCcCcHHHHHHHHHHHHHHHHHHHHHH---HhhHHhccCChH
Confidence 99999999998763 5689999999999999999999999999999987765 469999999986
No 34
>PRK08540 adenylosuccinate lyase; Reviewed
Probab=100.00 E-value=1e-66 Score=533.49 Aligned_cols=291 Identities=22% Similarity=0.278 Sum_probs=257.4
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--HHHHhhcCCcccccCCcchhHHHHHHHHHHhC-CCCc
Q 016801 82 SYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDE--IERQIEAGKFMWRTDREDVHMNIEAALTDIIG-EPAK 158 (382)
Q Consensus 82 ~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~--i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G-~~g~ 158 (382)
+.|..++++++.|++||+++++++|+||++.+++|.++|.+ +..+.. .... ...++|+ +++|+.|.+++| +.++
T Consensus 19 ~s~~~~~~~~l~ve~A~a~~l~~~Giip~~~a~~I~~~l~~~~i~~~~~-~~~~-~~~~~~v-~~~e~~L~~~~~~~~~~ 95 (449)
T PRK08540 19 WSEENKLQKMLDVEAALARAEAELGLIPEEAAEEINRKASTKYVKLERV-KEIE-AEIHHDI-MAVVKALSEVCEGDAGE 95 (449)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccCCHHHH-HHHH-HHhCCCc-HHHHHHHHHHhhhhhhc
Confidence 34568999999999999999999999999999999999876 532211 0111 1125666 899999999995 8899
Q ss_pred eeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHH
Q 016801 159 KLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAG 238 (382)
Q Consensus 159 ~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~ 238 (382)
|+|+|+||||+++|+++|++|+.+..+.+.|..|+++|.++|++|++++|+||||+|||||+||||||++|+++|.|+++
T Consensus 96 ~vH~g~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~ 175 (449)
T PRK08540 96 YVHFGATSNDIIDTATALQLKDSLEILEEKLKKLRGVLLKKAEEHKNTVCIGRTHGQHAVPTTYGMRFAIWASEIQRHLE 175 (449)
T ss_pred ceecCccHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhcCCCcCeehhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCc-----ccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 016801 239 RLQDCRVRMNFCPLGA-----CALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEW 313 (382)
Q Consensus 239 rL~~~~~~~~~~~lGg-----gA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl 313 (382)
||.+++++++.+|||| +++.|++++++ +++++.|||+.+..| +++++||++++++++++.++++|+|||+||
T Consensus 176 rL~~~~~~~~~~~lGgavGt~~a~~~~~~~i~-~~~a~~LGl~~~~~~--~~~~~rd~~~e~~~~l~~~a~~l~kia~Dl 252 (449)
T PRK08540 176 RLEQLKPRVCVGQMTGAVGTQAAFGEKGIEIQ-KRVMEILGLKPVLIS--NQVIQRDRHAEFMMFLANIATTLDKIGLEI 252 (449)
T ss_pred HHHHHHHhhheccccccccchhhCCCccHHHH-HHHHHHcCCCCCCCc--CCccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 22333345554 689999999976544 357999999999999999999999999999
Q ss_pred HHhcccccceeecC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhccC
Q 016801 314 VLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQTG 381 (382)
Q Consensus 314 ~llss~e~gev~l~-~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe~ 381 (382)
++|++.|||||.++ +++++||||||||+||+.+|.++++|.++.|.... .++++|++|+||+|+.
T Consensus 253 ~l~s~~e~gei~e~~~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~g~~~~---~~~~~~~~~~rd~~~~ 318 (449)
T PRK08540 253 RNLQRTEIGEVEEEFGKKQVGSSTMPHKRNPITSEQICGLARVVRSNVEP---ALLNNPLWDERDLTNS 318 (449)
T ss_pred HHHHhhhhhhhhcccCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHH---HHhcchhhhccCCchh
Confidence 99999999999864 57899999999999999999999999999998754 5578999999999974
No 35
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=4.7e-66 Score=512.52 Aligned_cols=300 Identities=22% Similarity=0.225 Sum_probs=257.5
Q ss_pred cccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCccccc-C
Q 016801 59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRT-D 137 (382)
Q Consensus 59 ~~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~-~ 137 (382)
+.+++.+|+ +.+....| .|..++++++.||+|++++|+++|+||++.+++|.++|+++..+.. .+.-.. .
T Consensus 8 ~~~~~~~~~--~~~~~~~~-----s~~~~i~a~l~vE~A~a~a~~~~G~Ip~~~a~~I~~a~~~~~~d~~--~~~~~~~~ 78 (351)
T PRK05975 8 HPFLSGLFG--DDEIAALF-----SAEADIAAMLAFEAALAEAEAEHGIIPAEAAERIAAACETFEPDLA--ALRHATAR 78 (351)
T ss_pred cchhhccCC--CHHHHHHc-----CcHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCCCCHH--HHhhHHHh
Confidence 345555553 23333344 4568999999999999999999999999999999999977532211 111001 1
Q ss_pred CcchhHHHHHHHHHHhC-CCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccc
Q 016801 138 REDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQR 216 (382)
Q Consensus 138 ~~dv~~a~e~~l~e~~G-~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~ 216 (382)
.++...++++.+.+.+| +.++|||+|+||||++||+++|++|+.+..|.+.|..|+++|.++|++|+|++|+||||+||
T Consensus 79 ~g~~v~~~v~~l~~~~g~~~~~~vH~G~TsnDi~dTa~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~grTH~Q~ 158 (351)
T PRK05975 79 DGVVVPALVRQLRAAVGEEAAAHVHFGATSQDVIDTSLMLRLKAASEILAARLGALIARLDALEATFGQNALMGHTRMQA 158 (351)
T ss_pred cCCcHHHHHHHHHHHhCchhhCcccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecccCCCc
Confidence 22223578889999998 77899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCC------CCCChHHHHHHcCCCCCCCCchhhccchH
Q 016801 217 AQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTG------LPIDRFMTAEALEFTAPMRNSIDAVSDRD 290 (382)
Q Consensus 217 A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~------~~~~~~~la~~LG~~~~~~n~~~~~~~rD 290 (382)
|+||||||||++|+++|.|+++||.+++++++.+||||++ ||+ .+.+++++++.|||..+ .+|+++||
T Consensus 159 A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lGGAv--Gt~~~~~~~~~~~~~~~a~~LGl~~~----~~~~~~rD 232 (351)
T PRK05975 159 AIPITVADRLASWRAPLLRHRDRLEALRADVFPLQFGGAA--GTLEKLGGKAAAVRARLAKRLGLEDA----PQWHSQRD 232 (351)
T ss_pred CeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccHh--ccCccCCCcHHHHHHHHHHHhCcCCC----cchhhccH
Confidence 9999999999999999999999999999999999999743 553 24568899999999743 16889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCC
Q 016801 291 FVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGL 370 (382)
Q Consensus 291 ~~~e~~~~l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~ 370 (382)
++++++++++.++++|+|||+||++|+++| ||+.+|. ++||||||||+||+.+|.++++++.+.++..++..+ +
T Consensus 233 ~~~e~~~~la~la~~l~kiA~Di~ll~s~e-gev~~~~--~~GSS~MPhKrNPv~~E~i~~~ar~~~~~~~~~~~~---~ 306 (351)
T PRK05975 233 FIADFAHLLSLVTGSLGKFGQDIALMAQAG-DEISLSG--GGGSSAMPHKQNPVAAETLVTLARFNATQVSGLHQA---L 306 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcccCCC--CCccCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHhc---c
Confidence 999999999999999999999999999999 9999974 699999999999999999999999999999877765 8
Q ss_pred Ccchhhhhc
Q 016801 371 PLAYNRDLQ 379 (382)
Q Consensus 371 p~~~~rD~q 379 (382)
+.+|+||..
T Consensus 307 ~~~~er~~~ 315 (351)
T PRK05975 307 VHEQERSGA 315 (351)
T ss_pred cchhccCCc
Confidence 999999964
No 36
>PRK07380 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=2.6e-65 Score=519.38 Aligned_cols=287 Identities=20% Similarity=0.234 Sum_probs=256.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCCcchhHHHHHHHHHHhCCCCceecc
Q 016801 83 YDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHT 162 (382)
Q Consensus 83 ~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G~~g~~lH~ 162 (382)
.|..+++++++||.|++++++++|+||++.+++|.+++ ++..+.-. . .-...+||+ +++++.+.+.+|+.++|||+
T Consensus 15 s~~~~~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~-~~d~~~i~-~-~~~~~~h~v-~a~v~~l~~~~g~~~~~vH~ 90 (431)
T PRK07380 15 TDTAKFQTWLDVEIAVCEAQAELGKIPQEAVEEIKAKA-NFDPQRIL-E-IEAEVRHDV-IAFLTNVNEYVGDAGRYIHL 90 (431)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcc-CCCHHHHH-H-HHHHhCCCh-HHHHHHHHHHHHHhhccccC
Confidence 34589999999999999999999999999999998754 12100000 0 001236777 77899999999988999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Q 016801 163 ARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQD 242 (382)
Q Consensus 163 G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~ 242 (382)
|+||||++||+++|++|+.+..+.+.|.+++++|.++|++|+|++|+||||+|||+||||||||++|+++|.|+++||.+
T Consensus 91 G~Ts~Di~dTa~~L~lr~~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~ 170 (431)
T PRK07380 91 GMTSSDVLDTGLALQLVASLDLLLEELEDLIQAIRYQAREHRNTVMIGRSHGIHAEPITFGFKLAGWLAETLRNRERLVR 170 (431)
T ss_pred CCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeechhcCccceechHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccCCcccccCCCCCCChH---HHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 016801 243 CRVRMNFCPLGACALAGTGLPIDRF---MTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE 319 (382)
Q Consensus 243 ~~~~~~~~~lGggA~aGt~~~~~~~---~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~ 319 (382)
++++++.+|| +||+ ||++++|++ ++++.|||..+.. + .++.+||++++++++++.++++|+|||+||++|++.
T Consensus 171 ~~~~~~~~~l-~GAv-Gt~~~~~~~~~~~~a~~LGl~~~~~-~-~~v~~rd~~~e~~~~la~~a~~L~kia~Di~~l~~~ 246 (431)
T PRK07380 171 LREDIAVGQI-SGAV-GTYANTDPRVEAITCQKLGLKPDTA-S-TQVISRDRHAEYVQTLALVGASLERFATEIRNLQRT 246 (431)
T ss_pred HHHHHhccCc-chhh-cCcccCChhHHHHHHHHcCCCCCCC-C-CCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999 5788 999999987 8999999997643 2 367999999999999999999999999999999999
Q ss_pred ccceeecC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 320 EFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 320 e~gev~l~-~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
+++|+.++ .++++|||+||||+||+.+|.++++|+.+.|+..+ .++|+|++|+||+|.
T Consensus 247 ~~~el~e~~~~g~~GSS~MPhKrNP~~~E~i~~~a~~~~g~~~~---~~~~~~~~~eRD~~~ 305 (431)
T PRK07380 247 DVLEVEEYFAKGQKGSSAMPHKRNPIRSERLSGLARVLRSYAVA---ALENVALWHERDISH 305 (431)
T ss_pred CceeecccCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHH---HHHhchhhhccCchH
Confidence 99999754 46789999999999999999999999999999985 467799999999985
No 37
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=2e-65 Score=524.19 Aligned_cols=282 Identities=28% Similarity=0.315 Sum_probs=251.1
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccc---cC-Ccchh--HHHHHHHHHHhC
Q 016801 81 ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWR---TD-REDVH--MNIEAALTDIIG 154 (382)
Q Consensus 81 ~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~---~~-~~dv~--~a~e~~l~e~~G 154 (382)
++.|++++++++.||+|+|++|+++|+||++.+++|.++|++ ++|+++ .+ +++-| .++++.+.+.+|
T Consensus 20 i~s~~~~i~a~l~ve~A~A~a~~~~G~ip~~~a~~I~~a~~~-------~~~d~~~~~~~~~~~~~~~~~lv~~l~~~~~ 92 (452)
T PRK09053 20 IFSDRATVQRMLDFEAALARAEAACGVIPAAAVAPIEAACDA-------ERLDLDALAQAAALAGNLAIPLVKQLTAQVA 92 (452)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhccc-------cCCCHHHHHHHHhhcCCchHHHHHHHHHHhc
Confidence 345669999999999999999999999999999999999865 224332 11 22222 567788888885
Q ss_pred ----CCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHH
Q 016801 155 ----EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYV 230 (382)
Q Consensus 155 ----~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a 230 (382)
+.++|||+|+||||++||+++|++|+.+..|.+.|..|+++|.+||++|+|++|+||||+|||+||||||||++|+
T Consensus 93 ~~~~~~~~~vH~G~SsnDi~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~GrTH~Q~A~P~T~G~~~~~~~ 172 (452)
T PRK09053 93 ARDAEAARYVHWGATSQDIIDTGLVLQLRDALDLLEPDLDRLCDALATLAARHRATPMVGRTWLQQALPVTLGLKFAGWL 172 (452)
T ss_pred ccCcchhccccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeehhccCCcceechHHHHHHHHH
Confidence 6689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccccCCcccccCCC-------CCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHH
Q 016801 231 EQLERDAGRLQDCRVRMNFCPLGACALAGTG-------LPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIA 303 (382)
Q Consensus 231 ~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~-------~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la 303 (382)
++|.|+++||.+++++++.+||||++ ||+ +++ ++++++.|||+.+.. .|+++||++++++++++.++
T Consensus 173 ~~l~r~~~RL~~~~~~~~~~~lGgav--Gt~~~~~~~~~~v-~~~~a~~LGl~~~~~---~~~~~rD~~~e~~~~la~la 246 (452)
T PRK09053 173 DALLRHRQRLAALRPRALVLQFGGAA--GTLASLGEQALPV-AQALAAELQLALPAL---PWHTQRDRIAEFASALGLLA 246 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhccccchh--hcccccccchHHH-HHHHHHHcCCCCCCC---CcccccHHHHHHHHHHHHHH
Confidence 99999999999999999999999763 553 334 578999999997653 46799999999999999999
Q ss_pred HHHHHHHHHHHHhcccccceeecC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 304 IHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 304 ~~L~kia~Dl~llss~e~gev~l~-~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
++|+|||+||++|+++|||||.+| +.+++||||||||+||+.+|.++++|+++.|+..+++. +++.+|+||.
T Consensus 247 ~~L~kia~Di~ll~~~e~gev~e~~~~~~~GSSiMP~KrNPv~~E~i~~~a~~v~g~~~~~~~---~~~~~~erd~ 319 (452)
T PRK09053 247 GTLGKIARDVSLLMQTEVGEVFEPAAAGKGGSSTMPHKRNPVGCAAVLTAATRAPGLVATLFA---AMPQEHERAL 319 (452)
T ss_pred HHHHHHHHHHHHHhccccchhhccccCCCCCcCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH---hChhhhcccC
Confidence 999999999999999999999765 57889999999999999999999999999999998755 5799999997
No 38
>PRK06390 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.2e-65 Score=525.54 Aligned_cols=293 Identities=22% Similarity=0.194 Sum_probs=253.2
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCccccc-CCcchhHHHHHHHHHHhCCCCcee
Q 016801 82 SYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRT-DREDVHMNIEAALTDIIGEPAKKL 160 (382)
Q Consensus 82 ~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~-~~~dv~~a~e~~l~e~~G~~g~~l 160 (382)
+.|..+++++++++.||+++++++|+||++++++|.+++.....+... -..... .+||+ +++|+.+.+.+|+.++|+
T Consensus 19 ~s~~~~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~~~~d~~~-~~~~~~~~~~dv-~~~~~~L~~~~g~~~~~i 96 (451)
T PRK06390 19 FDDENRLRYMLKVEAAIAKAEYEYGIIPRDAFLDIKNAVDSNSVRLER-VREIESEIKHDV-MALVEALSEQCSAGKNYV 96 (451)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccCCHHH-HHHHHHHhCCCc-HHHHHHHHHHhhhhhhhe
Confidence 345689999999999999999999999999999999988654222111 001122 27888 899999999999889999
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHH
Q 016801 161 HTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRL 240 (382)
Q Consensus 161 H~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL 240 (382)
|+|+||||+++|+++|++|+.+..|.+.|..|+++|.++|++|++++||||||+||||||||||||++|+++|.|+++||
T Consensus 97 H~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL 176 (451)
T PRK06390 97 HFGVTSNDINDTATALQIHDFVSIIKDDIKNLMETLIKLIDEYKDSPMMGRTHGQHASPITFGLKFAVYLDEMSRHLDRL 176 (451)
T ss_pred ecCccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhhCCCcCeehhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccc----cCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016801 241 QDCRVRMNFC----PLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLW 316 (382)
Q Consensus 241 ~~~~~~~~~~----~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll 316 (382)
.+++++++.+ |+|.++.+|++++.+++++++.|||+.+ |..+++++||++++++++++.++++|+|||+||++|
T Consensus 177 ~~~~~r~~~~~~~gavGt~a~~g~~~~~~~~~~a~~LGl~~~--~~~~~~~~rD~~~e~~~~l~~la~~l~kia~Di~l~ 254 (451)
T PRK06390 177 TEMGDRAFAGKVLGPVGTGAALGKDALDIQNRVMEILGIYSE--IGSTQIVNRDRYIEYLSVINGISVTLEKIATEIRNL 254 (451)
T ss_pred HHHHHHhhhhccCChhcChhhCCCcHHHHHHHHHHHcCCCCC--CCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999954 4544554455555668899999999975 344678999999999999999999999999999999
Q ss_pred cccccceee--cCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhccC
Q 016801 317 ASEEFGFIT--PSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQTG 381 (382)
Q Consensus 317 ss~e~gev~--l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe~ 381 (382)
+++|+||+. +++++++||||||||+||+.+|.++++|..+.+.....+ .+.+.+|+||+|+.
T Consensus 255 ss~e~g~v~E~~~~~~~~GSSiMP~KrNPv~~E~i~~~a~~~~~l~~~~~---~~~~~~~erd~~~~ 318 (451)
T PRK06390 255 QRPEIDEVSEYFDEESQVGSSSMPSKVNPINSENVVSLSRFIRSLIIPEY---EAGVTWHERDLTNS 318 (451)
T ss_pred hccccchhhcccccCCCCCccCCCCCCCcHHHHHHHHHHHHHHHhHHHHH---HhhhHhhccCCcch
Confidence 999999996 345699999999999999999999999977777776222 23555699999863
No 39
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.7e-62 Score=492.13 Aligned_cols=281 Identities=28% Similarity=0.323 Sum_probs=254.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-------HHHHHhhcCCcccccCCcchhHHHHHHHHHHhC-C
Q 016801 84 DKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLD-------EIERQIEAGKFMWRTDREDVHMNIEAALTDIIG-E 155 (382)
Q Consensus 84 d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~-------~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G-~ 155 (382)
+...+++|++||.|+++|++++|+||++.++.|.+++. +|.+.. ...+||+ ++++..+.+.|| +
T Consensus 16 ~~~~~~~~l~vE~ala~A~aelG~Ip~~a~~~I~~~~~~~~~d~~~i~eie-------~~t~HdV-~a~v~~l~e~~~~~ 87 (438)
T COG0015 16 EEAKLRAWLKVEAALARAQAELGVIPAEAAAEIDAAAAFAEFDLERIKEIE-------AETGHDV-KALVRALAEKVGEE 87 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhcccccCHHHHHHHH-------HHhCCCc-HHHHHHHHHhcCcc
Confidence 34889999999999999999999999999999988852 222211 1247888 899999999999 8
Q ss_pred CCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHH
Q 016801 156 PAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLER 235 (382)
Q Consensus 156 ~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r 235 (382)
.++|||+|.|||||+||+..|++|++++.|.+.|.++++.|.++|.+|+|++|+||||+|||+|||||.+++.|+++|.|
T Consensus 88 ~~~~VH~GaTS~DI~Dta~~L~lk~a~~ii~~~l~~l~~~L~~~A~~~k~t~m~GRTHgq~A~PtT~G~k~A~w~~el~R 167 (438)
T COG0015 88 ASEYVHFGATSQDIIDTALALQLKEALDLILPDLKRLIEALAELALEHKDTPMLGRTHGQPAEPTTFGKKFANWLAELLR 167 (438)
T ss_pred cccceecccchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeecccccCCCCccchHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccCCcccccCCCCCCC------hHHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHH
Q 016801 236 DAGRLQDCRVRMNFCPLGACALAGTGLPID------RFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRL 309 (382)
Q Consensus 236 ~~~rL~~~~~~~~~~~lGggA~aGt~~~~~------~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~ki 309 (382)
+++||.++.+++..+.+| ||+ ||....+ ++++++.|||..+. ...|+.+||+++++.++|+.++++|.||
T Consensus 168 ~~~rL~~~~~~~~~g~i~-Ga~-Gt~Aa~~~~~~~ve~~v~e~LGL~~~p--~stq~~~RD~~ae~~~~La~i~~sl~k~ 243 (438)
T COG0015 168 HLERLEEAEERIIVGKIG-GAV-GTLAALGDLGAEVEERVAEKLGLKPAP--ISTQVSPRDRIAEFFSALALLAGSLEKF 243 (438)
T ss_pred HHHHHHHHHhhhhhhccc-cch-hhHhhcCchhHHHHHHHHHHcCCCCCC--CCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 566 8865543 47899999998532 1359999999999999999999999999
Q ss_pred HHHHHHhcccccceeecC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhc
Q 016801 310 GEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQ 379 (382)
Q Consensus 310 a~Dl~llss~e~gev~l~-~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~q 379 (382)
|.||++|++.|++||++| .++|+|||+||||+||+.+|.+.++++.+.++...++.. ++++|+||+.
T Consensus 244 a~dIr~l~~~e~~Ev~E~f~~gq~GSSaMPHKrNPi~~E~~~glar~~r~~~~~~~e~---~~~whERdlt 311 (438)
T COG0015 244 ARDIRLLQRTEVGEVEEPFAKGQVGSSAMPHKRNPIDSENVTGLARVARALVSTLLEN---LVLWHERDLT 311 (438)
T ss_pred HHHHHHHHhccccccccccCCCCCCCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHH---hHHHHhcccc
Confidence 999999999999999875 689999999999999999999999999999999877776 6999999985
No 40
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2. This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting.
Probab=100.00 E-value=4.8e-62 Score=496.80 Aligned_cols=287 Identities=19% Similarity=0.150 Sum_probs=245.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhhcCCcccccCCcchhHHHHHHHHHHhCCCCceecc
Q 016801 84 DKALYKHDIMGSKAHASMLAKQGL-ISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHT 162 (382)
Q Consensus 84 d~~l~~a~i~v~~A~a~a~~e~Gi-I~~~~a~~I~~al~~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G~~g~~lH~ 162 (382)
|.+.++++++++.|++++++++|+ ||++.++.|.+++.++..+. -.-.-...+||+ .++++.+.+.+|+.++|+|+
T Consensus 16 ~~~~~~~~l~~e~ala~a~~~~g~~ip~~~a~~i~~~~~~~d~~~--i~~~e~~~~hdv-~a~~~~l~~~~~~~~~~vH~ 92 (436)
T cd03302 16 PRKKFSTWRKLWLWLAEAEKELGLDISDEQIEEMKANVENIDFEI--AAAEEKKLRHDV-MAHVHAFGLLCPAAAGIIHL 92 (436)
T ss_pred hHHHHHHHHHHHHHHHHhhHHhCCCCCHHHHHHHHHhhhcCCHHH--HHHHHHHhCcCc-hHHHHHHHHHhHhccCeeee
Confidence 448899999999999999999999 99999999988762211000 000011237787 66788899999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Q 016801 163 ARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQD 242 (382)
Q Consensus 163 G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~ 242 (382)
|+||||+++|++.|++|+++..|.+.|..|+++|.++|++|+|++||||||+|||+||||||||++|+++|.|+++||..
T Consensus 93 G~TS~Di~dta~~L~lr~a~~~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P~TfG~~~a~~~~~L~r~~~RL~~ 172 (436)
T cd03302 93 GATSCFVTDNTDLIQIRDALDLILPKLAAVIDRLAEFALEYKDLPTLGFTHYQPAQLTTVGKRACLWIQDLLMDLRNLER 172 (436)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeccccCCccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccCCcc----cccCCCCCCCh-------HHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHH
Q 016801 243 CRVRMNFCPLGAC----ALAGTGLPIDR-------FMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGE 311 (382)
Q Consensus 243 ~~~~~~~~~lGgg----A~aGt~~~~~~-------~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~ 311 (382)
++++++.+++||. +..|+.++.|+ +++++.|||..+. |...++.+||+++|++++++.++++|+|||+
T Consensus 173 ~~~~~~~~~~~GavGt~a~~~~~~~~dr~~~~~v~~~~a~~LGl~~~~-~~~~~v~~rD~~~e~~~~la~~a~~L~riA~ 251 (436)
T cd03302 173 LRDDLRFRGVKGTTGTQASFLDLFEGDHDKVEALDELVTKKAGFKKVY-PVTGQTYSRKVDIDVLNALSSLGATAHKIAT 251 (436)
T ss_pred HHHHHHhhcCcChhhhhHHHHhcCCchHHHHHHHHHHHHHHcCCCCCC-CchhhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988777642 22233456665 6899999999764 3445789999999999999999999999999
Q ss_pred HHHHhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 312 EWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 312 Dl~llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
||++|++ +||+.+|. ++++||||||||+||+.+|.++++|+++.|+..+++....+ .+|+||+
T Consensus 252 Dl~l~~s--~~el~e~~~~g~~GSS~MPhKrNPv~~E~i~~~a~~~~g~~~~~~~~~~~--~~~Erd~ 315 (436)
T cd03302 252 DIRLLAN--LKEVEEPFEKGQIGSSAMPYKRNPMRSERCCSLARHLMNLASNAAQTAST--QWFERTL 315 (436)
T ss_pred HHHHHhh--CceecccccCCCCCcccCCCccCcHHHHHHHHHHHHHHhhHHHHHHHhhc--cccccCC
Confidence 9999999 99999863 67899999999999999999999999999999999865443 3455553
No 41
>KOG1317 consensus Fumarase [Energy production and conversion]
Probab=100.00 E-value=1.3e-59 Score=444.53 Aligned_cols=318 Identities=22% Similarity=0.281 Sum_probs=287.3
Q ss_pred CCchhhhccc---cCccccccccCCCCcchHHHHHhcccc---ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 016801 44 PKHKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES---ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSIL 117 (382)
Q Consensus 44 ~~~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~---~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~ 117 (382)
.++|.|.|.+ ++|. ++|||+| |.|...+|.+. .+++..+++++-..++|+|..|.+.| +++..+++|.
T Consensus 26 ~~fR~E~DtfGe~~VP~-DkyyGAQ----T~Rs~~NF~IGg~~ERMP~pii~AfGiLKkaaA~vN~~~G-LDpkis~Ai~ 99 (487)
T KOG1317|consen 26 SSFRTERDTFGEIEVPA-DKYYGAQ----TQRSLQNFKIGGERERMPEPIIQAFGILKKAAAEVNQEYG-LDPKISKAIS 99 (487)
T ss_pred cchhhhccccCcccccc-hhhhhHH----HHHHhhccccCCccccCchHHHHHHHHHHHHHHHHhHhhC-CChHHHHHHH
Confidence 3667777654 8998 9999999 89999999864 57778999999999999999999999 8999999999
Q ss_pred HHHHHHHHHhhcCCccc---ccC-Ccchh-HHHH---HHHHHHhC-CCCce-ec------cCCChhhHHHHHHHHHHHHH
Q 016801 118 RGLDEIERQIEAGKFMW---RTD-REDVH-MNIE---AALTDIIG-EPAKK-LH------TARSRNDQVLTDFRLWCRDA 181 (382)
Q Consensus 118 ~al~~i~~~~~~~~f~~---~~~-~~dv~-~a~e---~~l~e~~G-~~g~~-lH------~G~SsnDi~~Ta~~L~lr~~ 181 (382)
++++++..++..++||+ +.+ ++..| +++| ++.+|++| +.|.+ +| .+|||||.+||++++..-..
T Consensus 100 ~AadeV~~GKL~dhFPLvvwQTGSGTQsNMN~NEVIsNrAieilGg~~GsK~VHPNdHvN~SQSSNDTFPtamHIa~~~e 179 (487)
T KOG1317|consen 100 QAADEVASGKLNDHFPLVVWQTGSGTQSNMNANEVISNRAIEILGGKLGSKKVHPNDHVNKSQSSNDTFPTAMHIAAATE 179 (487)
T ss_pred HHHHHHhcCcccccCceeEEecCCCccccCcHHHHHHHHHHHHhcccccCcccCCccccccccccCCccchHHHHHHHHH
Confidence 99999999999999984 554 44433 3555 89999998 55542 44 89999999999999999988
Q ss_pred HH-HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCC
Q 016801 182 ID-TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGT 260 (382)
Q Consensus 182 l~-~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt 260 (382)
+. .|++.|..|.++|..|++||+|++++||||.|||+|.|+||+|++|++++...++|++.+.+|+..+..||+|+ ||
T Consensus 180 i~~~L~P~l~~L~~aL~aKs~EfkdIiKIGRTHtqDAvPLTLGQEFsgY~qQ~~ngl~Rv~~~lpr~y~LA~GGTAV-GT 258 (487)
T KOG1317|consen 180 INSRLIPALTNLRDALEAKSKEFKDIIKIGRTHTQDAVPLTLGQEFSGYVQQVTNGLQRVAATLPRLYQLAQGGTAV-GT 258 (487)
T ss_pred HHHhhhHHHHHHHHHHHhhhHHHHHHHHhcccccccccccchhhhhhhHHHHHHHHHHHHHhhhhHHHHHhcCCccc-cc
Confidence 86 69999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCCCCh-------HHHHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cceeecCCC
Q 016801 261 GLPIDR-------FMTAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDS 329 (382)
Q Consensus 261 ~~~~~~-------~~la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e---~gev~l~~~ 329 (382)
|++..+ +++++++||++ .++|.+++.+.+|.++|++++|..++++|.||++|||++.|+| +||+.+| +
T Consensus 259 GLNTr~GFaeK~a~~va~ltgLpFvtApNkFEALAahDA~VE~~GalNt~A~SlmKianDIRfLGSGPRcGlgEL~LP-E 337 (487)
T KOG1317|consen 259 GLNTRKGFAEKIAARVAELTGLPFVTAPNKFEALAAHDAMVEVSGALNTIAVSLMKIANDIRFLGSGPRCGLGELMLP-E 337 (487)
T ss_pred cccccccHHHHHHHHHHHHhCCCceecccHHHHHHhhhhHHHhcccHHHHHHHHHHHhhhhhhccCCCCCCccccccC-C
Confidence 998753 45999999997 5789999999999999999999999999999999999999999 7999997 7
Q ss_pred CCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcC
Q 016801 330 VSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKG 369 (382)
Q Consensus 330 ~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~ 369 (382)
..+||||||+|+||..||.+.++|.||+|+.+++.....|
T Consensus 338 NEPGSSIMPGKVNPTQcEamTmvcaQVMGN~vAvtvgGsn 377 (487)
T KOG1317|consen 338 NEPGSSIMPGKVNPTQCEAMTMVCAQVMGNHVAVTVGGSN 377 (487)
T ss_pred CCCCcccCCCCCCcHHHHHHHHHHHHHhcCceEEEecccC
Confidence 8999999999999999999999999999999887665444
No 42
>PRK09285 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.2e-58 Score=472.94 Aligned_cols=297 Identities=21% Similarity=0.238 Sum_probs=245.2
Q ss_pred ccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCC---CCHHHHHH---HHHHHHHHHHHhhcCCcc
Q 016801 60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGL---ISDSDKNS---ILRGLDEIERQIEAGKFM 133 (382)
Q Consensus 60 ~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~Gi---I~~~~a~~---I~~al~~i~~~~~~~~f~ 133 (382)
..|+++|+.++.+....|+ |.+++++++.+|.|++++++++|+ ||+..++. |.+.+.++ ..+.+.
T Consensus 10 ~p~~~ry~~~~~e~~~~~s-----~~~~~~~~l~vE~A~a~a~a~~g~~~~ip~~~~~~~~~i~~~~~~~----~~~d~~ 80 (456)
T PRK09285 10 SPLDGRYASKTAALRPIFS-----EFGLIRYRVQVEVEWLIALAAHPGIPEVPPFSAEANAFLRAIVENF----SEEDAA 80 (456)
T ss_pred CCCccccCCCCHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh----CcccHH
Confidence 4677888654455555664 468999999999999999999999 88777777 66655222 111111
Q ss_pred c-----ccCCcchhHHHHHHHHHHhC------CCCceeccCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 016801 134 W-----RTDREDVHMNIEAALTDIIG------EPAKKLHTARSRNDQVLTDFRLWCRDAIDT-IVRSIQRLQVALVKLAL 201 (382)
Q Consensus 134 ~-----~~~~~dv~~a~e~~l~e~~G------~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~-L~~~l~~L~~~L~~~A~ 201 (382)
. +..+||+ +++|+.+.+.+| +.++|||+|+||||++||+++|++|+.+.. |.+.|..|+++|.++|+
T Consensus 81 ~i~~~e~~~~hdv-~a~~~~l~~~~~~~~~~~~~~~~vH~G~Ts~Di~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~ 159 (456)
T PRK09285 81 RIKEIERTTNHDV-KAVEYFLKEKLAGLPELEAVSEFIHFACTSEDINNLSHALMLKEAREEVLLPALRELIDALKELAH 159 (456)
T ss_pred HHHHHHHHhCCCh-HHHHHHHHHHhcccCcchhHHhHccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1125666 789999999997 467999999999999999999999999998 99999999999999999
Q ss_pred hcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCC-C-----C------CChHHH
Q 016801 202 KNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTG-L-----P------IDRFMT 269 (382)
Q Consensus 202 ~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~-~-----~------~~~~~l 269 (382)
+|+|++|+||||+|||+|||||+||++|+++|.|+++||.++ ...+.+| ||+ ||. . + +++. +
T Consensus 160 ~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~---~~~g~~~-GAv-Gt~~a~~~~~~~~~~~~v~~~-~ 233 (456)
T PRK09285 160 EYADVPMLSRTHGQPATPTTLGKEMANVAYRLERQLKQLEAV---EILGKIN-GAV-GNYNAHLAAYPEVDWHAFSRE-F 233 (456)
T ss_pred HcCCCeeeceecCCCCeeehHHHHHHHHHHHHHHHHHHHHHH---HHhhhcc-ccc-ccHHHHhhhcCCccHHHHHHH-H
Confidence 999999999999999999999999999999999999999999 2334443 565 663 1 2 4344 4
Q ss_pred HHHcCCCCCCCCchhh-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeec-CCCCCCCCCCCCCCCCccHHH
Q 016801 270 AEALEFTAPMRNSIDA-VSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITP-SDSVSTGSSIMPQKKNPDPME 347 (382)
Q Consensus 270 a~~LG~~~~~~n~~~~-~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e~gev~l-~~~~~~GSSiMP~K~NP~~~E 347 (382)
++.|||.. |+++| +.+||++++++++++.++++|+|||+|+++|++ +||+.+ ++++++|||+|||||||+.+|
T Consensus 234 ~~~LGL~~---~~~~~~v~~rD~~~e~~~~la~~a~~L~kia~Di~ll~~--~~e~~e~~~~~~~GSS~MPhKrNPv~~E 308 (456)
T PRK09285 234 VESLGLTW---NPYTTQIEPHDYIAELFDAVARFNTILIDLDRDVWGYIS--LGYFKQKTKAGEIGSSTMPHKVNPIDFE 308 (456)
T ss_pred HHHhCCCC---CCCccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chhhhccCCCCCCCCCCCCCCcCchHHH
Confidence 55999975 35676 699999999999999999999999999999999 666553 368999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHcCC-Ccchhhhhcc
Q 016801 348 LVRGKSARVIGDLVTLLTLCKGL-PLAYNRDLQT 380 (382)
Q Consensus 348 ~i~~~a~~v~G~~~~~~~~~~~~-p~~~~rD~qe 380 (382)
.++++++.+.+....++.. + .++|+||++.
T Consensus 309 ~i~~~a~~~~~~~~~~~~~---~~~~~~eRD~~~ 339 (456)
T PRK09285 309 NSEGNLGLANALLEHLAAK---LPISRWQRDLTD 339 (456)
T ss_pred HHHHHHHHHHHHHHHHHhh---ccHHhhCCcCch
Confidence 9999999999888776654 6 6789999985
No 43
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL). This subgroup contains EcASL, the product of the purB gene in Escherichia coli, and related proteins. It is a member of the Lyase class I family of the Lyase_I superfamily. Members of the Lyase class I family function as homotetramers to catalyze similar beta-elimination reactions in which a Calpha-N or Calpha-O bond is cleaved with the subsequent release of fumarate as one of the products. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two non-sequential steps in the de novo purine biosynthesis pathway: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=1.1e-58 Score=468.86 Aligned_cols=286 Identities=21% Similarity=0.178 Sum_probs=238.7
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCCCCH------HHHHHHHHHHHHHH-HHhhcCCcccccCCcchhHHHHHHHHHHh
Q 016801 81 ISYDKALYKHDIMGSKAHASMLAKQGLISD------SDKNSILRGLDEIE-RQIEAGKFMWRTDREDVHMNIEAALTDII 153 (382)
Q Consensus 81 ~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~------~~a~~I~~al~~i~-~~~~~~~f~~~~~~~dv~~a~e~~l~e~~ 153 (382)
++.|..+++++++||.|++++++++|+||+ +.++.|.+++.... .+...-.-.-...++|+ .++|+.+.+.+
T Consensus 4 ~~s~~~~~~~~l~vE~ala~a~a~~g~Ip~~~~~~~~aa~~i~~~~~~~~~~d~~~~~~~~~~~~hdv-~al~~~l~~~~ 82 (425)
T cd01598 4 YFSEYALIKYRVQVEVEWLIALSNLEEIPEVPPLTKEELKFLRAIIENFSEEDALRIKEIEATTNHDV-KAVEYFLKEKF 82 (425)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHhhcCccCHHHHHHHHHHHCCCc-HHHHHHHHHHh
Confidence 345678999999999999999999999999 99999988764311 01000000001236777 78999999999
Q ss_pred C------CCCceeccCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHH
Q 016801 154 G------EPAKKLHTARSRNDQVLTDFRLWCRDAID-TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLL 226 (382)
Q Consensus 154 G------~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~-~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~ 226 (382)
| +.++|+|+|+||||++||+++|++|+.+. .|.+.|.+|+++|.++|++|+|++|+||||+|||+||||||||
T Consensus 83 g~~~~~~~~~~~vH~G~TsnDi~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~~~~dt~m~GrTH~Q~A~P~TfG~~~ 162 (425)
T cd01598 83 ETLGLLKKIKEFIHFACTSEDINNLAYALMIKEARNEVILPLLKEIIDSLKKLAKEYADVPMLSRTHGQPATPTTLGKEL 162 (425)
T ss_pred cccccchhhhhHhccCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecccCCccCeehhHHHHH
Confidence 7 35679999999999999999999999994 6789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCC-----------CCChHHHHHHcCCCCCCCCchhh-ccchHHHHH
Q 016801 227 LAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGL-----------PIDRFMTAEALEFTAPMRNSIDA-VSDRDFVLE 294 (382)
Q Consensus 227 ~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~-----------~~~~~~la~~LG~~~~~~n~~~~-~~~rD~~~e 294 (382)
++|+++|.|+++||.++. ..+.+| |++ ||.. ....+.+++.|||..+ +.+| +++||+++|
T Consensus 163 a~w~~~L~r~~~RL~~~~---~~g~~g-Gav-Gt~~~~~~~~~~~~~~~~~~~~a~~LgL~~~---~~~~~v~~rD~~~e 234 (425)
T cd01598 163 AVFVYRLERQYKQLKQIE---ILGKFN-GAV-GNFNAHLVAYPDVDWRKFSEFFVTSLGLTWN---PYTTQIEPHDYIAE 234 (425)
T ss_pred HHHHHHHHHHHHHHHHHH---Hhheee-Cch-hhhhhhhhccCcccHHHHHHHHHHHhCcCCC---CcccchhccHHHHH
Confidence 999999999999999994 344465 455 6521 1125679999999864 3566 799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccceee-cCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCC-Cc
Q 016801 295 FLSANSIIAIHLSRLGEEWVLWASEEFGFIT-PSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGL-PL 372 (382)
Q Consensus 295 ~~~~l~~la~~L~kia~Dl~llss~e~gev~-l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~-p~ 372 (382)
++++++.++++|+|||+||++|++. ||+. +++++++||||||||+||+.+|.++++++.+.+....++.. + ++
T Consensus 235 ~~~~La~la~~L~kia~Di~ll~s~--ge~~e~~~~~~~GSS~MPhKrNPv~~E~i~~~a~~a~~~~~~~~~~---~~~~ 309 (425)
T cd01598 235 LFDALARINTILIDLCRDIWGYISL--GYFKQKVKKGEVGSSTMPHKVNPIDFENAEGNLGLSNALLNHLSAK---LPIS 309 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC--cceeecCCCCCCCcCCCCCCcCchHHHHHHHHHHHHHHHHHHHHhh---hhhh
Confidence 9999999999999999999999997 5555 34689999999999999999999999999999888766654 5 68
Q ss_pred chhhhhcc
Q 016801 373 AYNRDLQT 380 (382)
Q Consensus 373 ~~~rD~qe 380 (382)
+|+||+|+
T Consensus 310 ~~eRD~~~ 317 (425)
T cd01598 310 RLQRDLTD 317 (425)
T ss_pred hhcccccc
Confidence 89999985
No 44
>PLN02848 adenylosuccinate lyase
Probab=100.00 E-value=4.5e-56 Score=453.57 Aligned_cols=284 Identities=19% Similarity=0.230 Sum_probs=233.6
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCC---CH---HHHHHHHHHHHHHHH-HhhcCCcccccCCcchhHHHHHHHHHHhC-
Q 016801 83 YDKALYKHDIMGSKAHASMLAKQGLI---SD---SDKNSILRGLDEIER-QIEAGKFMWRTDREDVHMNIEAALTDIIG- 154 (382)
Q Consensus 83 ~d~~l~~a~i~v~~A~a~a~~e~GiI---~~---~~a~~I~~al~~i~~-~~~~~~f~~~~~~~dv~~a~e~~l~e~~G- 154 (382)
.|..++++++.||.|+++++++.|+| |+ +.++.|.+++.++.. +...-.-.....+||+ .++|+.+.+++|
T Consensus 31 Sd~a~~~~~l~vE~ala~a~a~~g~i~~~P~i~~~aa~~i~~~~~~~~~~d~~~~~~~e~~t~hdv-~a~~~~l~~~~~~ 109 (458)
T PLN02848 31 SEFGLIRYRVLVEVKWLLKLSQIPEVTEVPPFSDEANSFLEGIIAGFSVDDALEVKKIERVTNHDV-KAVEYFLKQKCKS 109 (458)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCHhhHHHHHHHHHHhCCCc-HHHHHHHHHHhcc
Confidence 34589999999999999999999997 76 999999887633210 0000000001237777 788999999996
Q ss_pred --C---CCceeccCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHH
Q 016801 155 --E---PAKKLHTARSRNDQVLTDFRLWCRDAIDT-IVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLA 228 (382)
Q Consensus 155 --~---~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~-L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~ 228 (382)
+ .++|+|+|+|||||+||+++|++|+++.. |.+.|..|+++|.++|++|++++|+||||+|||+|||||++|++
T Consensus 110 ~~~~~~~~~~vH~G~TsqDi~dTa~~L~lr~a~~~~l~~~L~~l~~aL~~lA~~~~dt~m~GRTH~Q~A~PiTfG~~~a~ 189 (458)
T PLN02848 110 HPELAKVLEFFHFACTSEDINNLSHALMLKEGVNSVVLPTMDEIIKAISSLAHEFAYVPMLSRTHGQPASPTTLGKEMAN 189 (458)
T ss_pred ccchhhhhCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccCccceeehHHHHHHH
Confidence 2 45899999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccCCcccccCC------CCC-CChHH----HHHHcCCCC-CCCCchhhccchHHHHHHH
Q 016801 229 YVEQLERDAGRLQDCRVRMNFCPLGACALAGT------GLP-IDRFM----TAEALEFTA-PMRNSIDAVSDRDFVLEFL 296 (382)
Q Consensus 229 ~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt------~~~-~~~~~----la~~LG~~~-~~~n~~~~~~~rD~~~e~~ 296 (382)
|+++|.|+++||.++. ..+.+| ||+ || +++ +|+.. +++.|||.. +. .+++++||+++|++
T Consensus 190 w~~~L~r~~~rL~~~~---l~g~~~-GAv-Gt~aa~~~~~~~~d~~~v~~~la~~LGL~~~~~---~~~v~~rD~~~e~~ 261 (458)
T PLN02848 190 FAYRLSRQRKQLSEVK---IKGKFA-GAV-GNYNAHMSAYPEVDWPAVAEEFVTSLGLTFNPY---VTQIEPHDYMAELF 261 (458)
T ss_pred HHHHHHHHHHHHHHHH---hccEee-ccc-chhhhhhhccCCCCHHHHHHHHHHHhCCCCCCc---hhhHhccHHHHHHH
Confidence 9999999999999872 234554 444 54 233 65444 555799984 32 34579999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccceeecC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCc-ch
Q 016801 297 SANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL-AY 374 (382)
Q Consensus 297 ~~l~~la~~L~kia~Dl~llss~e~gev~l~-~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~-~~ 374 (382)
++++.++.+|+|||+|++.|+ |+||+.++ .++++||||||||+||+.+|.++++++.+.|....++ +++|. +|
T Consensus 262 ~~La~~a~~l~kia~Di~~~~--e~ge~~e~~~~~~~GSS~MP~KrNPv~~E~i~~~a~~~~~~~~~~~---~~~~~~~~ 336 (458)
T PLN02848 262 NAVSRFNNILIDFDRDIWSYI--SLGYFKQITKAGEVGSSTMPHKVNPIDFENSEGNLGLANAELSHLS---MKLPISRM 336 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhh--hcCCcccccCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHHH---hcCcchhh
Confidence 999999999999999988777 67777643 4689999999999999999999999999999999877 67444 49
Q ss_pred hhhhcc
Q 016801 375 NRDLQT 380 (382)
Q Consensus 375 ~rD~qe 380 (382)
+||++.
T Consensus 337 eRD~~~ 342 (458)
T PLN02848 337 QRDLTD 342 (458)
T ss_pred ccccch
Confidence 999864
No 45
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions. Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respective
Probab=100.00 E-value=5.1e-39 Score=300.51 Aligned_cols=175 Identities=43% Similarity=0.529 Sum_probs=168.9
Q ss_pred eeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHH
Q 016801 159 KLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAG 238 (382)
Q Consensus 159 ~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~ 238 (382)
.+|+|+|+||+.+|++++++++.+..+.+.+..+.+++..++++|++++||||||+|+|+|+||||+|.+|.+.|.|+.+
T Consensus 36 ~~h~g~s~~d~~~t~~~~~~~~~l~~l~~~l~~~~~~l~~~a~~~~~~~~~~~th~q~A~p~t~g~~~~~~~~~l~~~~~ 115 (231)
T cd01594 36 LVHKGRSSNDIGTTALRLALRDALDDLLPLLKALIDALALKAEAHKGTVMPGRTHLQDAQPVTLGYELRAWAQVLGRDLE 115 (231)
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEeecccccccCccccHHHHHHHHHHHHHHHHH
Confidence 45999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016801 239 RLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWAS 318 (382)
Q Consensus 239 rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss 318 (382)
||.++ +++++++.++.++.+|+|||+|+++|++
T Consensus 116 rL~~~-----------------------------------------------~~~~~~~~l~~~~~~l~r~a~d~~~~~~ 148 (231)
T cd01594 116 RLEEA-----------------------------------------------AVAEALDALALAAAHLSKIAEDLRLLLS 148 (231)
T ss_pred HHHHH-----------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99998 8899999999999999999999999999
Q ss_pred cccceeecCCC-CCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 319 EEFGFITPSDS-VSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 319 ~e~gev~l~~~-~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
.|++++.+|+. .++|||+||||+||+.+|.+++++..+.|....+.....+.+.+|+.|.|.
T Consensus 149 ~~~~~~~~~~~~~~~gSS~mp~k~Np~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 211 (231)
T cd01594 149 GEFGELGEPFLPGQPGSSIMPQKVNPVAAELVRGLAGLVIGNLVAVLTALKGGPERDNEDSPS 211 (231)
T ss_pred CCCCeeeCccCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHhcccccccccCHH
Confidence 99999888754 799999999999999999999999999999999999999999999999775
No 46
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.3e-34 Score=283.01 Aligned_cols=272 Identities=20% Similarity=0.142 Sum_probs=226.6
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCccc-cc----CCcchhHHHHHHHHHHhCCCCceeccCCChhh
Q 016801 94 GSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMW-RT----DREDVHMNIEAALTDIIGEPAKKLHTARSRND 168 (382)
Q Consensus 94 v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~-~~----~~~dv~~a~e~~l~e~~G~~g~~lH~G~SsnD 168 (382)
+..|.|.....++.||++.++++...++- ....|.. .+ -.+|| |+....+.+.|..+.|++|+|.|+.+
T Consensus 38 ~~lA~ae~~lgL~~itk~ai~e~~s~~~~-----e~~d~~~l~~ee~r~~hdV-mahvh~~~~~cp~aagiihlgatsc~ 111 (481)
T KOG2700|consen 38 LWLAEAEKELGLTTITKEAIEEMKSSRDI-----ENIDFTALSPEEGRYRHDV-MAHVHSFGELCPIAAGIIHLGATSCF 111 (481)
T ss_pred HhhhhhhhcCCcccchHHHHHHHHhhccc-----cccchhhcChhhhhhcccH-HHHHHHHHhhcchhcceEEeeeeeee
Confidence 34566666666667999988888765432 1122321 11 16777 88888999999877779999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 016801 169 QVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMN 248 (382)
Q Consensus 169 i~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~ 248 (382)
+.|.+-.+.+|++.+.+++.|..+++.|...+.+|+++++.||||+|+|+|+|||++.+-|..+|.+++++|..+..++.
T Consensus 112 vtdnadli~~rd~~k~i~~~l~~vIdrls~~~~~~k~~~~~g~Th~q~A~l~tfgkr~~~~~qel~~~l~~f~~~~~~~~ 191 (481)
T KOG2700|consen 112 VTDNADLIELRDASKLILPYLAGVIDRLSQFADKYKEKPTLGRTHLQPAQLTTFGKRMCLWIQELLRDLERFHRARTDVR 191 (481)
T ss_pred ecCCccceechhHHHHHHHHHHHHHHHHHHHHHHhccceecccccCccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcccccCCCC-------CCCh------HHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016801 249 FCPLGACALAGTGL-------PIDR------FMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVL 315 (382)
Q Consensus 249 ~~~lGggA~aGt~~-------~~~~------~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~l 315 (382)
...++| |. ||.. +... +.+++.+||..+.. ...++.+|+...+..+.+++++++..|+|.|+++
T Consensus 192 ~~~~kg-a~-gtqasf~~l~~~~~~kv~~ld~Lv~k~~gf~~~~~-~TGQt~sr~~~~~~~~~la~lgat~~k~~Tdirl 268 (481)
T KOG2700|consen 192 FRGLKG-AT-GTQASFLSLFLGDMDKVEKLDSLVTKELGFVPMYI-VTGQTYSRKTDAEEVAPLASLGATAHKYATDIRL 268 (481)
T ss_pred cccccc-ch-hhHHHHHHhhcccHHHHHHHHHHHHHHhCCCcccc-ccCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999974 55 7732 2222 25789999986442 1247889999999999999999999999999999
Q ss_pred hcccccceeecC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 316 WASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 316 lss~e~gev~l~-~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
+++ |+|+.+| ++.+.|||.||+||||+.+|.++++++.+++.....+.. +..-|++|++
T Consensus 269 l~~--~~ev~epFea~q~gsSaMp~krNpm~~E~itslar~l~~~v~~al~~--~~~qw~Ertl 328 (481)
T KOG2700|consen 269 LAK--FAEVEEPFEAHQIGSSAMPYKRNPMRCERITSLARHLRPYVTQALNT--ASVQWHERTL 328 (481)
T ss_pred HHH--HHHhhccccccccccccCCCCCCCchhHHHhHHHHHHHHHHHHHhhh--HHHHHhhccc
Confidence 999 9999876 789999999999999999999999999999988877641 1223566654
No 47
>PRK08937 adenylosuccinate lyase; Provisional
Probab=99.80 E-value=1.1e-19 Score=169.28 Aligned_cols=81 Identities=31% Similarity=0.343 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhh
Q 016801 298 ANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 376 (382)
Q Consensus 298 ~l~~la~~L~kia~Dl~llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~r 376 (382)
+++.++++|+|||+||++|++.||||+.+|. ++++||||||||+||+.+|.++++|.++.|+..+++... |.+|+|
T Consensus 22 ~l~~i~~~l~ria~Dl~~~~s~e~gei~~~~~~~~~gSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~---~~~~er 98 (216)
T PRK08937 22 VLALIATSLEKFANEIRLLQRSEIREVEEPFAKGQKGSSAMPHKRNPIGSERITGLARVLRSYLVTALENV---PLWHER 98 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccceeecccccCCCCCccCCCccCcHHHHHHHHHHHHHHHHHHHHHHHh---HHHhcc
Confidence 9999999999999999999999999999984 899999999999999999999999999999999999885 899999
Q ss_pred hhccC
Q 016801 377 DLQTG 381 (382)
Q Consensus 377 D~qe~ 381 (382)
|+++.
T Consensus 99 d~~~~ 103 (216)
T PRK08937 99 DLSHS 103 (216)
T ss_pred CCchh
Confidence 98863
No 48
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=93.19 E-value=1.6 Score=44.78 Aligned_cols=162 Identities=13% Similarity=0.030 Sum_probs=86.1
Q ss_pred eeccCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHH-----
Q 016801 159 KLHTARSRNDQVLTDFRLWCRDAID-TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQ----- 232 (382)
Q Consensus 159 ~lH~G~SsnDi~~Ta~~L~lr~~l~-~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~----- 232 (382)
.+|..+++-|+---.-......++. .+.....++++...--+++..=.+|.-+| +|++-|.+.|.+++..+..
T Consensus 182 ~f~~~~~~~~~~~~kga~gtqasf~~l~~~~~~kv~~ld~Lv~k~~gf~~~~~~T-GQt~sr~~~~~~~~~la~lgat~~ 260 (481)
T KOG2700|consen 182 RFHRARTDVRFRGLKGATGTQASFLSLFLGDMDKVEKLDSLVTKELGFVPMYIVT-GQTYSRKTDAEEVAPLASLGATAH 260 (481)
T ss_pred HHHHhhhhhhccccccchhhHHHHHHhhcccHHHHHHHHHHHHHHhCCCcccccc-CCcCCchhHHHHHHHHHHHHHHHH
Confidence 3555555555544433444455554 34555555554444445778888999999 9999999999988766543
Q ss_pred -HHHHHHHHHHHHhhcccccCCcccccCC-CCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHH
Q 016801 233 -LERDAGRLQDCRVRMNFCPLGACALAGT-GLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLG 310 (382)
Q Consensus 233 -l~r~~~rL~~~~~~~~~~~lGggA~aGt-~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia 310 (382)
+.-|++-|.+..+. ..||-.+-. |+ ..|- ..|++.. |++.. ++.+|.-..
T Consensus 261 k~~Tdirll~~~~ev--~epFea~q~-gsSaMp~--------------krNpm~~--------E~its---lar~l~~~v 312 (481)
T KOG2700|consen 261 KYATDIRLLAKFAEV--EEPFEAHQI-GSSAMPY--------------KRNPMRC--------ERITS---LARHLRPYV 312 (481)
T ss_pred HHHHHHHHHHHHHHh--hcccccccc-ccccCCC--------------CCCCchh--------HHHhH---HHHHHHHHH
Confidence 33344433332221 124433222 22 1111 1233211 22211 122222222
Q ss_pred HHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHH
Q 016801 311 EEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSAR 355 (382)
Q Consensus 311 ~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~ 355 (382)
.+.-- .+.+.- -+...|+|.||+|.||+.++...+.-..
T Consensus 313 ~~al~-----~~~~qw-~Ertl~dSa~~rivlP~~Fl~ad~~L~~ 351 (481)
T KOG2700|consen 313 TQALN-----TASVQW-HERTLDDSANRRIVLPDAFLTADGNLGT 351 (481)
T ss_pred HHHhh-----hHHHHH-hhcccccccccceechHHHHHHHHHHHH
Confidence 22211 122221 2568899999999999999998876653
No 49
>PF10925 DUF2680: Protein of unknown function (DUF2680); InterPro: IPR024485 Members in this family of proteins are annotated as YckD however currently no function is known.
Probab=86.65 E-value=4.2 Score=30.20 Aligned_cols=47 Identities=21% Similarity=0.369 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCc
Q 016801 86 ALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKF 132 (382)
Q Consensus 86 ~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f 132 (382)
.|...++..+++..--..+-|.|+++.|+.|.+.+++-..-....+|
T Consensus 11 ~l~~qm~e~kK~~idk~Ve~G~iTqeqAd~ik~~id~~~~~~~qnGf 57 (59)
T PF10925_consen 11 ALYKQMLELKKQIIDKYVEAGVITQEQADAIKKHIDQRQEYMQQNGF 57 (59)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 67788999999999999999999999999999998876655443344
No 50
>PF11348 DUF3150: Protein of unknown function (DUF3150); InterPro: IPR021496 This bacterial family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=34.71 E-value=97 Score=29.79 Aligned_cols=47 Identities=17% Similarity=0.229 Sum_probs=39.5
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHhh
Q 016801 82 SYDKALYKHDIMGSKAHASMLAKQGL-------ISDSDKNSILRGLDEIERQIE 128 (382)
Q Consensus 82 ~~d~~l~~a~i~v~~A~a~a~~e~Gi-------I~~~~a~~I~~al~~i~~~~~ 128 (382)
-+|+..++-+-.++..+-+...+.|+ ||.+.++.|...+++|..++.
T Consensus 45 i~dp~~L~~f~~lk~~A~r~~~~~G~rFlgG~aVP~~~~~~l~~~L~~i~~eF~ 98 (257)
T PF11348_consen 45 ICDPDALKPFSKLKKRAERLCLKVGVRFLGGYAVPEDKAEELAEELEDIKTEFE 98 (257)
T ss_pred eeChHHcCHHHHHHHHHHHHHHHcCCcccceeEcCHHHHHHHHHHHHHHHHHHH
Confidence 46777778888888888888889987 999999999999999987744
No 51
>KOG4797 consensus Transcriptional regulator [Transcription]
Probab=33.32 E-value=1.2e+02 Score=25.41 Aligned_cols=38 Identities=21% Similarity=0.268 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016801 167 NDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNE 204 (382)
Q Consensus 167 nDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~ 204 (382)
-|.+-|-+..++|+..+.|.+.+.+|.+....+-+|+.
T Consensus 54 MDLVKtHLmfAVREEVe~Lk~qI~eL~er~~~Le~EN~ 91 (123)
T KOG4797|consen 54 MDLVKTHLMFAVREEVEVLKEQIRELEERNSALERENS 91 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999999999998888877763
No 52
>CHL00180 rbcR LysR transcriptional regulator; Provisional
Probab=25.36 E-value=1.7e+02 Score=27.95 Aligned_cols=50 Identities=12% Similarity=0.018 Sum_probs=40.5
Q ss_pred cCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC
Q 016801 203 NEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLG 253 (382)
Q Consensus 203 ~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lG 253 (382)
.-++...=|| ...-.||..|..|..++..+.+.++++.+....+...+-|
T Consensus 46 ~lg~~Lf~R~-~r~~~lT~~G~~l~~~a~~ll~~~~~~~~~~~~~~~~~~g 95 (305)
T CHL00180 46 QLNIPLFDRS-KNKASLTEAGELLLRYGNRILALCEETCRALEDLKNLQRG 95 (305)
T ss_pred HhCCEEEEec-CCCceECHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Confidence 3456666676 4568999999999999999999999999888877655544
No 53
>TIGR02890 spore_yteA sporulation protein, yteA family. Members of this predicted regulatory protein are found only in endospore-forming members of the Firmicutes group of bacteria, and in nearly every such species; Clostridium perfringens seems to be an exception. The member from Bacillus subtilis, the model system for the study of the sporulation program, has been designated both yteA and yzwB. Some (but not all) members of this family show a strong sequence match to PFAM family pfam01258 the C4-type zinc finger protein, DksA/TraR family, but only one of the four key Cys residues is conserved. All members of this protein family share an additional C-terminal domain. The function of proteins in this family is unknown. YteA was detected in mature spores of Bacillus subtilis by Kuwana, et al., and appears to be expressed under control of sigma-K.
Probab=21.40 E-value=5.8e+02 Score=22.65 Aligned_cols=42 Identities=21% Similarity=0.267 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHH
Q 016801 226 LLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMT 269 (382)
Q Consensus 226 ~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~l 269 (382)
..+......+.+.+|+.++.|+..+.+|-.- ..|-+|+.+++
T Consensus 60 ~~~l~~~~~~~L~~Ie~AL~Ri~~G~YG~Ce--~CGe~I~~~RL 101 (159)
T TIGR02890 60 DIALREHEERELREIEHALQKIENGTYGICE--VCGKPIPYERL 101 (159)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCeec--ccCCcccHHHH
Confidence 3456667777788999999999998887655 34556655554
No 54
>PF14735 HAUS4: HAUS augmin-like complex subunit 4
Probab=20.88 E-value=4.1e+02 Score=25.34 Aligned_cols=85 Identities=15% Similarity=0.101 Sum_probs=57.9
Q ss_pred HHHHHHHHhCCCCceec-cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHH
Q 016801 145 IEAALTDIIGEPAKKLH-TARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQ 223 (382)
Q Consensus 145 ~e~~l~e~~G~~g~~lH-~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G 223 (382)
+|.+|.++|-....|.| -..+.++.+..+....+-+.+..-...+..+...+.+.. ..+.
T Consensus 45 iE~~Lk~KC~~Lls~~~p~~~~~s~~l~~ak~~~L~~~l~~ek~~~~~~k~~~~e~~-------------------~~l~ 105 (238)
T PF14735_consen 45 IEERLKKKCFSLLSYHQPDSESSSEGLKAAKSWQLPELLREEKQRLEKEKAQLRELL-------------------VLLE 105 (238)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccchhhHhHHHhHHHHHHHHHHHHHHHHHHHHHHH-------------------HHHH
Confidence 46666666653333444 446666666677777777777777777777766665532 3445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc
Q 016801 224 HLLLAYVEQLERDAGRLQDCRVRMN 248 (382)
Q Consensus 224 ~~~~~~a~~l~r~~~rL~~~~~~~~ 248 (382)
..++.|...|.++++.|........
T Consensus 106 ~q~~~y~~vL~~cl~~L~~li~~~r 130 (238)
T PF14735_consen 106 RQFATYYQVLLQCLQLLQKLIEKHR 130 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6889999999999999999876543
Done!