Query 016801
Match_columns 382
No_of_seqs 197 out of 1732
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 04:00:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016801.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016801hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tj7_A Argininosuccinate lyase 100.0 1E-84 3.6E-89 665.8 31.2 322 60-381 2-324 (457)
2 2e9f_A Argininosuccinate lyase 100.0 3.7E-85 1.3E-89 670.0 27.8 323 59-381 3-327 (462)
3 1k7w_A Delta 2 crystallin; eye 100.0 9.3E-85 3.2E-89 668.0 27.2 323 59-381 8-330 (468)
4 3r6q_A Aspartase; aspartate am 100.0 5E-78 1.7E-82 616.6 33.1 323 45-374 4-358 (468)
5 1fur_A Fumarase C, FUMC; hydro 100.0 5.4E-78 1.8E-82 617.2 32.7 317 46-369 4-353 (467)
6 4adm_A Fumarase C, fumarate hy 100.0 1.3E-77 4.3E-82 616.1 31.5 323 44-375 30-381 (495)
7 1vdk_A Fumarase C, fumarate hy 100.0 2.3E-77 7.8E-82 612.7 33.4 317 46-369 3-353 (466)
8 1jsw_A L-aspartase, L-aspartat 100.0 1.9E-77 6.5E-82 615.0 31.8 317 46-369 5-356 (478)
9 1yfm_A Fumarase, YFUM; lyase, 100.0 1.5E-77 5.3E-82 615.4 31.0 317 46-369 28-378 (488)
10 3ocf_A Fumarate lyase:delta cr 100.0 2.7E-77 9.2E-82 611.3 31.7 324 44-374 21-378 (478)
11 3e04_A Fumarase, fumarate hydr 100.0 2.2E-76 7.5E-81 604.2 30.3 317 45-369 29-380 (490)
12 3gtd_A Fumarase C, fumarate hy 100.0 6.1E-76 2.1E-80 600.4 32.5 319 45-370 24-375 (482)
13 4hgv_A Fumarase C, fumarate hy 100.0 3.6E-75 1.2E-79 598.7 30.9 329 45-380 35-396 (495)
14 1q5n_A 3-carboxy-CIS,CIS-mucon 100.0 1.4E-72 4.9E-77 576.3 26.5 306 59-380 5-323 (454)
15 3c8t_A Fumarate lyase; structu 100.0 7E-72 2.4E-76 570.6 30.2 299 59-380 5-317 (451)
16 1c3c_A Protein (adenylosuccina 100.0 1.2E-71 4.2E-76 565.7 29.3 284 82-380 13-304 (429)
17 2pfm_A Adenylosuccinate lyase; 100.0 3E-71 1E-75 564.8 29.0 285 81-380 22-316 (444)
18 4eei_A Adenylosuccinate lyase; 100.0 5.4E-71 1.9E-75 561.3 27.1 282 84-381 16-306 (438)
19 1dof_A Adenylosuccinate lyase; 100.0 7.9E-71 2.7E-75 555.4 27.6 290 62-380 6-305 (403)
20 1re5_A 3-carboxy-CIS,CIS-mucon 100.0 5.7E-71 2E-75 563.8 24.1 284 81-380 18-319 (450)
21 2fel_A 3-carboxy-CIS,CIS-mucon 100.0 8.9E-69 3.1E-73 532.7 22.2 297 59-378 8-314 (359)
22 1yis_A Adenylosuccinate lyase; 100.0 4.3E-66 1.5E-70 531.3 26.1 287 84-378 27-329 (478)
23 2qga_B Adenylosuccinate lyase; 100.0 6.5E-67 2.2E-71 535.6 19.8 305 60-381 9-340 (465)
24 2ptr_A Adenylosuccinate lyase; 100.0 6.6E-66 2.3E-70 527.8 26.1 298 60-380 10-339 (462)
25 3bhg_A Adenylosuccinate lyase; 100.0 2.4E-65 8.1E-70 523.3 22.6 303 60-381 13-343 (459)
26 2j91_A Adenylosuccinate lyase; 100.0 8.9E-65 3E-69 523.7 24.5 287 83-377 53-354 (503)
27 3fxd_A Protein ICMQ; helix bun 21.7 1.4E+02 0.0049 20.9 4.4 20 107-126 4-23 (57)
No 1
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=1e-84 Score=665.81 Aligned_cols=322 Identities=46% Similarity=0.758 Sum_probs=312.7
Q ss_pred ccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccc-cCC
Q 016801 60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWR-TDR 138 (382)
Q Consensus 60 ~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~-~~~ 138 (382)
+|||+||++.+++.+++|+.++.+|+.++++++.+++|||++|+++|+||++++++|.++|++|..+...++|+++ ..+
T Consensus 2 ~~~~gr~~~~~~~~~~~f~~s~~~d~~l~~~~i~~~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~ 81 (457)
T 1tj7_A 2 ALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDA 81 (457)
T ss_dssp -CCCTTCSSCCCHHHHHHHCCHHHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHCGGGGGGSCC
T ss_pred cccccccccchHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhHhcCCcCcCCCCC
Confidence 6999999999999999999999999999999999999999999999999999999999999999988888889887 568
Q ss_pred cchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccc
Q 016801 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (382)
Q Consensus 139 ~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~ 218 (382)
||+||++|+++.+++|+.|+|||+|+||||++||+++|++|+++..|.+.|..|+++|.++|++|++++||||||+||||
T Consensus 82 ~dv~~~v~~~l~e~~g~~g~~vH~g~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~~~GrTHlQ~A~ 161 (457)
T 1tj7_A 82 EDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQ 161 (457)
T ss_dssp SSHHHHHHHHHHHHHGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEETTEEEE
T ss_pred CcHHHHHHHHHHHHccccccceecCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCcCCe
Confidence 99999999999999998889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHH
Q 016801 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298 (382)
Q Consensus 219 P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~ 298 (382)
||||||+|++|+++|.||++||++++++++.+||||||++||++++|++++++.|||+.+..|+++|+++||++++++++
T Consensus 162 P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~~~~~~~la~~LGl~~~~~n~~~~~~~rD~~~e~~~~ 241 (457)
T 1tj7_A 162 PVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSA 241 (457)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCBCTTCTTTTCCSSCCCHHHHHHHHTCSSBCSCHHHHHHCCHHHHHHHHH
T ss_pred echHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCCCCCHHHHHHHcCCCCCCCChHHHHHccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 299 l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
++.++++|+|||+||++|+|+|||||++|+.+.+||||||||+||+.+|.++++|++|+|++.+++++++++|++||||+
T Consensus 242 l~~~a~~L~kia~Di~ll~s~e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~RDl 321 (457)
T 1tj7_A 242 AAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDM 321 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTTCCEECCGGGCBCCTTCTTCCBCHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHhhcch
Confidence 99999999999999999999999999998777789999999999999999999999999999999999999999999999
Q ss_pred ccC
Q 016801 379 QTG 381 (382)
Q Consensus 379 qe~ 381 (382)
|++
T Consensus 322 ~~~ 324 (457)
T 1tj7_A 322 QED 324 (457)
T ss_dssp GGH
T ss_pred hhH
Confidence 975
No 2
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=3.7e-85 Score=669.97 Aligned_cols=323 Identities=56% Similarity=0.911 Sum_probs=305.1
Q ss_pred cccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCC
Q 016801 59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDR 138 (382)
Q Consensus 59 ~~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~ 138 (382)
++|||+||++.|++.+++|+.+..+|+.++++++.+|+|||++|+++|+||++++++|.++|++|..+...++|+++.++
T Consensus 3 ~~~~g~r~~~~t~~~~~~f~~s~~~d~~l~~~~i~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~f~~~~~~ 82 (462)
T 2e9f_A 3 HRTWGGRFGEGPDALAARFNASLAFDRALWREDLWQNRVHARMLHAVGLLSAEELEAILKGLDRIEEEIEAGTFPWREEL 82 (462)
T ss_dssp -----------CCSHHHHHHCCHHHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHTCSCCCGGG
T ss_pred ccccCCccchhhHHHHHhccCCCccCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhHhcccCCcCCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999988888899998889
Q ss_pred cchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--cccccccccc
Q 016801 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGL--IVPGYTHLQR 216 (382)
Q Consensus 139 ~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~--~~~GrTHlQ~ 216 (382)
||+||++|+++.+++|+.|+|||+|+||||++||+++|++|+++..|.+.|..|+++|.++|++|+|+ +||||||+||
T Consensus 83 ~dv~~~~~~~l~e~~g~~g~~vH~g~SsnDv~~Ta~~l~lr~~l~~l~~~l~~L~~~L~~~A~~~~~~~~~~~GrTHlQ~ 162 (462)
T 2e9f_A 83 EDVHMNLEARLTELVGPPGGKLHTARSRNDQVATDLRLYLRGAIDELLALLLALRRVLVREAEKHLDPLYVLPGYTHLQR 162 (462)
T ss_dssp CSHHHHHHHHHHHHHCTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCEEEEEETTEE
T ss_pred CchHHHHHHHHHHHccccccceecCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcCccccCcccCcc
Confidence 99999999999999998899999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHH
Q 016801 217 AQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFL 296 (382)
Q Consensus 217 A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~ 296 (382)
||||||||+|++|+++|.|+++||++++++++.+||||+|++||++++|++++++.|||+.+..|+++|+++||++++++
T Consensus 163 A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~~~~~~~~a~~LG~~~~~~n~~~~~~~rD~~~e~~ 242 (462)
T 2e9f_A 163 AQPVLLAHWFLAYYEMLKRDAGRLEDAKERLNESPLGAAALAGTGFPIDRHFTARELGFKAPMRNSLDAVASRDFALEVL 242 (462)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEECTTCCSSSCCSSCCCHHHHHHHTTCSEECSCHHHHHHCCHHHHHHH
T ss_pred CeeccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccccCCCCCCHHHHHHHhCCCCCCCCcHHHHHccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhh
Q 016801 297 SANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 376 (382)
Q Consensus 297 ~~l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~r 376 (382)
++++.++++|+|||+||++|+|+|||||++|+.+.+||||||||+||+.+|.++++|++|+|++.+++++++|+|++|||
T Consensus 243 ~~l~~~a~~L~kia~Dl~ll~s~e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~r 322 (462)
T 2e9f_A 243 SALNIGMLHLSRMAEELILYSTEEFGFVEVPDAFATGSSIMPQKKNPDILELIRAKAGRVLGAFVGLSAVVKGLPLAYNK 322 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTTCCEECCGGGCEECSSSSSCEECHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSBCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCcEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCchHhhh
Confidence 99999999999999999999999999999987777899999999999999999999999999999999999999999999
Q ss_pred hhccC
Q 016801 377 DLQTG 381 (382)
Q Consensus 377 D~qe~ 381 (382)
|+|++
T Consensus 323 Dl~~~ 327 (462)
T 2e9f_A 323 DLQED 327 (462)
T ss_dssp GGGGG
T ss_pred chhhh
Confidence 99986
No 3
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=100.00 E-value=9.3e-85 Score=667.96 Aligned_cols=323 Identities=46% Similarity=0.755 Sum_probs=304.8
Q ss_pred cccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCC
Q 016801 59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDR 138 (382)
Q Consensus 59 ~~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~ 138 (382)
+++||+||++.+++.+++|+.+..+|+.++++++.+++|||++|+++|+||++++++|.++|++|..+...++|+++.++
T Consensus 8 ~~~~~~r~~~~~~~~~~~f~~s~~~d~~~~~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~f~~~~~~ 87 (468)
T 1k7w_A 8 DKLWGGRFSGSTDPIMEKLNSSIAYDQRLSEVDIQGSMAYAKALEKAGILTKTELEKILSGLEKISEEWSKGVFVVKQSD 87 (468)
T ss_dssp -----------CCHHHHHHHCCHHHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHTCCCCCTTC
T ss_pred ccccccccchhHHHHHHHccCCCcccHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhhhcccCccCCCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999988888899998889
Q ss_pred cchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccc
Q 016801 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (382)
Q Consensus 139 ~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~ 218 (382)
||+||++|+++.+++|+.|+|||+|+||||++||+++|++|+.+..|.+.|..|+++|.++|++|++++||||||+||||
T Consensus 88 ~dv~m~~~~~l~e~~g~~g~~vH~g~SsnDv~~Ta~~l~lr~~l~~l~~~L~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~ 167 (468)
T 1k7w_A 88 EDIHTANERRLKELIGDIAGKLHTGRSRNDQVVTDLKLFMKNSLSIISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQ 167 (468)
T ss_dssp CSHHHHHHHHHHHHHCGGGGGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEE
T ss_pred CchHHHHHHHHHHHccccccceecCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEeeccccCcCCc
Confidence 99999999999999998899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHH
Q 016801 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298 (382)
Q Consensus 219 P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~ 298 (382)
||||||+|++|+++|.||++||.+++++++.+||||+|++||++++|++++++.|||+.+..|+++|+++||++++++++
T Consensus 168 P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~ 247 (468)
T 1k7w_A 168 PIRWSQFLLSHAVALTRDSERLGEVKKRINVLPLGSGALAGNPLDIDREMLRSELEFASISLNSMDAISERDFVVEFLSF 247 (468)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHHHHHHHSEECTTCTTTTCCTTCCCHHHHHHHHTCSEECSCHHHHHHCCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCChHHHHHHcCCCCCCCChHHHHHccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 299 l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
++.++++|+|||+||++|+|+|||||++|+.+.+||||||||+||+.+|.++++|++|+|++.+++++++++|++||||+
T Consensus 248 l~~la~~L~kia~Dl~ll~s~e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~rDl 327 (468)
T 1k7w_A 248 ATLLMIHLSKMAEDLIIYSTSEFGFLTLSDAFSTGASLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDL 327 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTTCCEECCGGGCEEETTEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhCCchHhhhhh
Confidence 99999999999999999999999999998777789999999999999999999999999999999999999999999999
Q ss_pred ccC
Q 016801 379 QTG 381 (382)
Q Consensus 379 qe~ 381 (382)
|++
T Consensus 328 ~~~ 330 (468)
T 1k7w_A 328 QED 330 (468)
T ss_dssp GGH
T ss_pred hhh
Confidence 985
No 4
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=100.00 E-value=5e-78 Score=616.60 Aligned_cols=323 Identities=24% Similarity=0.288 Sum_probs=298.2
Q ss_pred Cchhhhccc---cCccccccccCCCCcchHHHHHhcccc-ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 016801 45 KHKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGL 120 (382)
Q Consensus 45 ~~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al 120 (382)
.+|+|+|.+ ++|. +.|||.| |.|++++|+.+ ..+++.++++++.||+|+|++|+++|+||++++++|.++|
T Consensus 4 ~~r~e~d~~g~~~vp~-~~~yg~q----t~ra~~nf~i~~~~~~~~~i~a~~~vk~A~A~a~~~~Gil~~~~a~aI~~a~ 78 (468)
T 3r6q_A 4 DVRIEKDFLGEKEIPK-DAYYGVQ----TIRATENFPITGYRIHPELIKSLGIVKKSAALANMEVGLLDKEVGQYIVKAA 78 (468)
T ss_dssp -CEEEEETTEEEEECT-TCCCCHH----HHHHHHHCCSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred CCCCccccCCCccCCc-ccccCHH----HHHHHHccccCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 468888876 8898 8999998 99999999866 6788999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCcccccC----CcchhHHH-H---HHHHHHhC-CCCce--ec------cCCChhhHHHHHHHHHHHHHHH
Q 016801 121 DEIERQIEAGKFMWRTD----REDVHMNI-E---AALTDIIG-EPAKK--LH------TARSRNDQVLTDFRLWCRDAID 183 (382)
Q Consensus 121 ~~i~~~~~~~~f~~~~~----~~dv~~a~-e---~~l~e~~G-~~g~~--lH------~G~SsnDi~~Ta~~L~lr~~l~ 183 (382)
++|..++..++|++++. ++++||++ | +++.|++| +.|+| +| +||||||++||+++|++|+.+.
T Consensus 79 ~~i~~~~~~~~f~~~~~~~g~gt~~nmnvnevia~~~~e~~G~~~g~y~~vHpndhVn~g~SsnDv~~Ta~~L~~r~~l~ 158 (468)
T 3r6q_A 79 DEVIEGKWNDQFIVDPIQGGAGTSINMNANEVIANRALELMGEEKGNYSKISPNSHVNMSQSTNDAFPTATHIAVLSLLN 158 (468)
T ss_dssp HHHHTTTTGGGCCSCSSCSSTTHHHHHHHHHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCccccCCCccHHhccccccccccHHHHHHHHHHHHhccccCCcCccCCccCCCCCCChHhHHHHHHHHHHHHHHH
Confidence 99998887888987652 67888753 3 67888999 55665 77 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCC
Q 016801 184 TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLP 263 (382)
Q Consensus 184 ~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~ 263 (382)
.|.+.|..|+++|.+||++|+|++||||||+|||||+||||+|++|+++|.||++||++++++++.+||||||+ ||+++
T Consensus 159 ~l~~~L~~L~~~L~~~A~~~~~~v~~GrTHlQ~A~PiT~G~~~~~~~~~l~rd~~RL~~~~~~l~~~~lGgtAv-GT~~~ 237 (468)
T 3r6q_A 159 QLIETTKYMQQEFMKKADEFAGVIKMGRTHLQDAVPILLGQEFEAYARVIARDIERIANTRNNLYDINMGATAV-GTGLN 237 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTHHHHTEECTTCTTT-SSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHccCcEEecCcCCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCeec-CCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred CChHH-------HHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cceeecCCCCCC
Q 016801 264 IDRFM-------TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVST 332 (382)
Q Consensus 264 ~~~~~-------la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e---~gev~l~~~~~~ 332 (382)
+|+++ +++.|||+. +..|+++|+++||++++++++++.++++|+|||+||++|+|+| ||||.+| +.++
T Consensus 238 ~~~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~Kia~DlrllsS~pr~g~gei~lp-~~~~ 316 (468)
T 3r6q_A 238 ADPEYISIVTEHLAKFSGHPLRSAQHLVDATQNTDCYTEVSSALKVCMINMSKIANDLRLMASGPRAGLSEIVLP-ARQP 316 (468)
T ss_dssp CCHHHHHHHHHHHHHHHCSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSCCCEECC-CCSC
T ss_pred CChHHHHHHHHHHHHHhCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeEEECC-CCCC
Confidence 99876 799999996 5789999999999999999999999999999999999999888 9999998 5799
Q ss_pred CCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcch
Q 016801 333 GSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAY 374 (382)
Q Consensus 333 GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~ 374 (382)
||||||||+||+.+|.++++|++|+|++.++++++++.++..
T Consensus 317 GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~a~~~g~~el 358 (468)
T 3r6q_A 317 GSSIMPGKVNPVMPEVMNQVAFQVFGNDLTITSASEAGQFEL 358 (468)
T ss_dssp CCTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTB
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcCchhh
Confidence 999999999999999999999999999999999888765543
No 5
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=100.00 E-value=5.4e-78 Score=617.18 Aligned_cols=317 Identities=22% Similarity=0.281 Sum_probs=296.8
Q ss_pred chhhhccc---cCccccccccCCCCcchHHHHHhccccccc-cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 016801 46 HKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTESISY-DKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLD 121 (382)
Q Consensus 46 ~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~~~~-d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~ 121 (382)
+|+|+|.+ ++|. ++|||++ |++.+++|+.+..+ |++++++++.+|+|||++|+++|+||++++++|.++|+
T Consensus 4 ~r~e~d~~g~~~vp~-~~~~g~~----t~r~~~~f~~s~~~~~~~~i~a~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~ 78 (467)
T 1fur_A 4 VRSEKDSMGAIDVPA-DKLWGAQ----TQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAAD 78 (467)
T ss_dssp CEEEEETTEEEEECT-TCCCCHH----HHHHHHHCCCSSCBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred cCccccCCCCccCCc-ccccchh----hHHHHHhccCCCccCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 57788766 8898 8899986 99999999998666 99999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCccccc----CCcchhHHHHHHH----HHHhC-CCCce--ec------cCCChhhHHHHHHHHHHHHHHHH
Q 016801 122 EIERQIEAGKFMWRT----DREDVHMNIEAAL----TDIIG-EPAKK--LH------TARSRNDQVLTDFRLWCRDAIDT 184 (382)
Q Consensus 122 ~i~~~~~~~~f~~~~----~~~dv~~a~e~~l----~e~~G-~~g~~--lH------~G~SsnDi~~Ta~~L~lr~~l~~ 184 (382)
+|..+...++|++++ .++|+||+++..+ .|++| +.|+| +| +||||||++||+++|++|+++..
T Consensus 79 ~i~~~~~~~~f~~~~~q~g~~~~~~mn~~~via~~a~e~~G~~~g~~~~lHp~~~Vn~g~SsnD~~~Ta~~L~lr~~l~~ 158 (467)
T 1fur_A 79 EVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRK 158 (467)
T ss_dssp HHHTTTTGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCSSTTCSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccccchhhhccccccccccHHHHHHHHHHHHhCcccccccccCchhhcccCCChhhHHHHHHHHHHHHHHHH
Confidence 999887778888765 3689998777544 89998 77777 88 99999999999999999999997
Q ss_pred -HHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCC
Q 016801 185 -IVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLP 263 (382)
Q Consensus 185 -L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~ 263 (382)
|.+.|..|+++|.+||++|++++||||||+||||||||||+|++|+++|.||++||++++++++.+||||||+ ||+++
T Consensus 159 ~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGgtAv-GT~~~ 237 (467)
T 1fur_A 159 QLIPQLKTLTQTLNEKSRAFADIVKIGRTNLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAV-GTGLN 237 (467)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTEECTTCTTT-SSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEeeccccCccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCcchh-cCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred CChHH-------HHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cceeecCCCCCC
Q 016801 264 IDRFM-------TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVST 332 (382)
Q Consensus 264 ~~~~~-------la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e---~gev~l~~~~~~ 332 (382)
+|+++ +++.|||+. +.+|+++|+++||++++++++++.++++|+|||+||++|+|+| ||||.+|+ .++
T Consensus 238 ~~~~~~~~v~~~la~~LGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~~r~~~gei~lp~-~~~ 316 (467)
T 1fur_A 238 THPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPE-NEP 316 (467)
T ss_dssp SCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCSEECCC-CSC
T ss_pred CChhHHHHHHHHHHHHhCCCCccCCCHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCceeEECCC-CCC
Confidence 99876 999999995 7889999999999999999999999999999999999999887 99999986 579
Q ss_pred CCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcC
Q 016801 333 GSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKG 369 (382)
Q Consensus 333 GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~ 369 (382)
||||||||+||+.+|.++++|++|+|++.+++.+.++
T Consensus 317 GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~ 353 (467)
T 1fur_A 317 GSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGAS 353 (467)
T ss_dssp CCTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999998775
No 6
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=100.00 E-value=1.3e-77 Score=616.10 Aligned_cols=323 Identities=25% Similarity=0.303 Sum_probs=288.5
Q ss_pred CCchhhhccc---cCccccccccCCCCcchHHHHHhcccc-ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 016801 44 PKHKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRG 119 (382)
Q Consensus 44 ~~~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~a 119 (382)
..+|+|+|.+ ++|+ ++|||++ |+|.+++|+.+ ..+++.++++++.||+|+|++|+++|+||++++++|.++
T Consensus 30 ~~~r~e~d~~g~~~vp~-~~~~G~~----t~r~~~~F~is~~~~~~~~I~a~~~vk~A~A~a~~~~Gil~~~~a~aI~~a 104 (495)
T 4adm_A 30 ANYRIEHDTMGEVRVPA-KALWRAQ----TQRAVENFPISGRGLERTQIRALGLLKGACAQVNSDLGLLAPEKADAIIAA 104 (495)
T ss_dssp -CEEEEEETTEEEEEET-TCSCCHH----HHHHHHHCCSSSCBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred cccCCccCcCCCccCCh-hhhcCch----hHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 3578888876 8898 8999997 99999999977 357889999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCccccc---C-CcchhHHHHHHHHH--HhCCCCceec------cCCChhhHHHHHHHHHHHHHHH-HHH
Q 016801 120 LDEIERQIEAGKFMWRT---D-REDVHMNIEAALTD--IIGEPAKKLH------TARSRNDQVLTDFRLWCRDAID-TIV 186 (382)
Q Consensus 120 l~~i~~~~~~~~f~~~~---~-~~dv~~a~e~~l~e--~~G~~g~~lH------~G~SsnDi~~Ta~~L~lr~~l~-~L~ 186 (382)
|++|..++..++|++++ + ++|+||+++..+.+ ++| |+|+| +||||||++||+++|++|+.+. .|.
T Consensus 105 ~~ei~~~~~~~~f~~~~~q~g~gt~~nmnvnevia~ra~lG--G~~vH~~dhVn~g~SsNDv~~Ta~~L~lr~~l~~~l~ 182 (495)
T 4adm_A 105 AAEIADGQHDDQFPIDVFQTGSGTSSNMNTNEVIASIAAKG--GVTLHPNDDVNMSQSSNDTFPTATHIAATEAAVAHLI 182 (495)
T ss_dssp HHHHHTTSCGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHT--TCCCCTTTTTTTTCCHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHhCcccCCCCcchhhccccccccccHHHHHHHHHHhC--CCccCcccccCCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 99999988888998875 2 68899988887777 456 55566 5999999999999999999996 699
Q ss_pred HHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCCh
Q 016801 187 RSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDR 266 (382)
Q Consensus 187 ~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~ 266 (382)
+.|..|+++|.+||++|+|++||||||+|||||+||||+|++|+++|.||++||++++++++.+||||||+ ||++++++
T Consensus 183 ~~L~~L~~~L~~kA~e~~d~v~~GrTHlQ~A~PiT~G~~~~~~a~~l~rd~~RL~~~~~~l~~~~LGgtAv-GT~~~~~~ 261 (495)
T 4adm_A 183 PALQQLHDALAAKALDWHTVVKSGRTHLMDAVPVTLGQEFSGYARQIEAGIERVRACLPRLGELAIGGTAV-GTGLNAPD 261 (495)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTEECTTCTTT-SSCTTSCT
T ss_pred HHHHHHHHHHHHHHHHccCCeeeccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeee-cCCccCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998 99999987
Q ss_pred HH-------HHHHcCC-C-CCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccceeecCCCCCCCC
Q 016801 267 FM-------TAEALEF-T-APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVSTGS 334 (382)
Q Consensus 267 ~~-------la~~LG~-~-~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~---e~gev~l~~~~~~GS 334 (382)
++ +++.||| + .+..|+++|+++||++++++++++.++++|+|||+||++|+|+ |||||.+| ++++||
T Consensus 262 ~~~~~v~~~la~~lG~~~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~e~gei~lp-~~q~GS 340 (495)
T 4adm_A 262 DFGVRVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLP-DLQPGS 340 (495)
T ss_dssp THHHHHHHHHHHHHCCTTCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSTTSCCCEECC-CC----
T ss_pred hHHHHHHHHHHHHhCCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceEECC-CCCCCC
Confidence 54 9999999 4 4788999999999999999999999999999999999999995 59999998 479999
Q ss_pred CCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchh
Q 016801 335 SIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYN 375 (382)
Q Consensus 335 SiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~ 375 (382)
|||||||||+.+|.++++|++|+|++.+++++.++.++..|
T Consensus 341 SiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln 381 (495)
T 4adm_A 341 SIMPGKVNPVLPEAVTQVAAQVIGNDAAIAWGGANGAFELN 381 (495)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBC
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcChHHhh
Confidence 99999999999999999999999999999999888777654
No 7
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=100.00 E-value=2.3e-77 Score=612.70 Aligned_cols=317 Identities=22% Similarity=0.273 Sum_probs=295.9
Q ss_pred chhhhccc---cCccccccccCCCCcchHHHHHhcccccc-c--cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 016801 46 HKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTESIS-Y--DKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRG 119 (382)
Q Consensus 46 ~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~~~-~--d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~a 119 (382)
+|+|+|.+ ++|. ++|||++ |++.+++|+.+.. + |+.++++++.+++|||++|+++|+||++++++|.++
T Consensus 3 ~r~e~d~~g~~~vp~-~~~~g~~----t~~~~~~f~~s~~~~~~~~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a 77 (466)
T 1vdk_A 3 YRIERDTMGEVRVPA-DKYWGAQ----TQRSLENFRIGTDRFRMPLEIIRAYGMLKKAAARANLELGELPEEIAKAIIQA 77 (466)
T ss_dssp -CEEEETTEEEECCT-TCCCCHH----HHHHHHHCCSSTTTCBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred ccccccCCCCcCCCc-ccccchh----hHHHHHhccCCCccccCcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 57777766 8998 8899986 9999999998843 6 899999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCccccc----CCcchhHHHHHHH----HHHhC-CCC-ceec------cCCChhhHHHHHHHHHHHHHHH
Q 016801 120 LDEIERQIEAGKFMWRT----DREDVHMNIEAAL----TDIIG-EPA-KKLH------TARSRNDQVLTDFRLWCRDAID 183 (382)
Q Consensus 120 l~~i~~~~~~~~f~~~~----~~~dv~~a~e~~l----~e~~G-~~g-~~lH------~G~SsnDi~~Ta~~L~lr~~l~ 183 (382)
|++|..+...++|++++ .++|+||+++..+ .|++| +.| +++| +||||||++||+++|++|+++.
T Consensus 78 ~~~i~~~~~~~~f~~~~~q~~~~~~~~mn~~~via~~a~e~~g~~~g~~~lHp~~~Vn~g~SsnD~~~Ta~~L~lr~~l~ 157 (466)
T 1vdk_A 78 AEEVVQGKWDDHFPLVVFQTGSGTQTNMNVNEVIANRASEILGKPLGSKYAHPNDHVNRGQSSNDTFPTAMYVAVALALH 157 (466)
T ss_dssp HHHHHTTTTGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTSCSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccccCCCchhhhccccccccccHHHHHHHHHHHHhCccccccccccccCcCCCCChhhHHHHHHHHHHHHHHH
Confidence 99999887778888876 3789999877655 88899 677 7888 9999999999999999999998
Q ss_pred -HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCC
Q 016801 184 -TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGL 262 (382)
Q Consensus 184 -~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~ 262 (382)
.|.+.|..|+++|.+||++|++++||||||+||||||||||||++|+++|.||++||++++++++.+||||||+ ||++
T Consensus 158 ~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~Av-GT~~ 236 (466)
T 1vdk_A 158 QRLYPAVEGLIRTFTAKAQAFDQIVKVGRTHLMDAVPITLGQEIGSWAAQLKTTLAAVKEMEKGLYNLAIGGTAV-GTGL 236 (466)
T ss_dssp HTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHGGGGEECTTCTTT-SSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCeeeccccCccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCChHH-------HHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cceeecCCCCC
Q 016801 263 PIDRFM-------TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVS 331 (382)
Q Consensus 263 ~~~~~~-------la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e---~gev~l~~~~~ 331 (382)
++|+++ +++.|||+. +..|+++++++||++++++++++.++++|+|||+||++|+|+| ||||.+|+ .+
T Consensus 237 ~~~~~~~~~v~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~~r~~~gei~lp~-~~ 315 (466)
T 1vdk_A 237 NAHPRFGELVAKYLAEETGLPFRVAENRFAALAAHDELVNVMGAIRTLAGALMKIGNDVRWLASGPYAGIGEITIPA-NE 315 (466)
T ss_dssp TSCTTHHHHHHHHHHHHHSSCCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSSSSCCSEECCC-CS
T ss_pred cCCchHHHHHHHHHHHHcCCCCCCCcchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeEECCC-CC
Confidence 999865 899999995 7899999999999999999999999999999999999999887 99999986 57
Q ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcC
Q 016801 332 TGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKG 369 (382)
Q Consensus 332 ~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~ 369 (382)
+|||||||||||+.+|.++++|++|+|++.+++.++++
T Consensus 316 ~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~ 353 (466)
T 1vdk_A 316 PGSSIMPGKVNPTQVEALTMVVVRVYGNDHTVAFAGSQ 353 (466)
T ss_dssp CCSSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHc
Confidence 99999999999999999999999999999999998876
No 8
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=1.9e-77 Score=614.98 Aligned_cols=317 Identities=25% Similarity=0.282 Sum_probs=297.5
Q ss_pred chhhhccc---cCccccccccCCCCcchHHHHHhccccc-cc--cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 016801 46 HKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTESI-SY--DKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRG 119 (382)
Q Consensus 46 ~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~~-~~--d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~a 119 (382)
+|+|+|.+ ++|. ++|||++ |++.+++|+.+. .+ |++++++++.+|+|||++|+++|+||++++++|.++
T Consensus 5 ~r~e~d~~g~~~vp~-~~~~g~~----t~r~~~~f~~s~~~~~~~~~~i~~~~~ve~A~a~a~~~~Gii~~~~a~~I~~a 79 (478)
T 1jsw_A 5 IRIEEDLLGTREVPA-DAYYGVH----TLRAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAA 79 (478)
T ss_dssp EEEEECSSCEEEEES-SCCCCHH----HHHHHHHCCSCSCCSCCTTSHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred cCcccccCCCcCCCC-ccccchH----HHHHHHhCCCcCccccCcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 68888866 8898 8999997 999999999874 66 889999999999999999999999999999999999
Q ss_pred HHHHH-HHhhcCCccccc----CCcchhHHHH----HHHHHHhC-CCCc--eec------cCCChhhHHHHHHHHHHHHH
Q 016801 120 LDEIE-RQIEAGKFMWRT----DREDVHMNIE----AALTDIIG-EPAK--KLH------TARSRNDQVLTDFRLWCRDA 181 (382)
Q Consensus 120 l~~i~-~~~~~~~f~~~~----~~~dv~~a~e----~~l~e~~G-~~g~--~lH------~G~SsnDi~~Ta~~L~lr~~ 181 (382)
|++|. ++...++|++++ .++|+||++| +++.+++| +.|+ ++| +||||||++||+++|++|++
T Consensus 80 ~~~i~~~~~~~~~f~v~~~~~g~~~~~~mnv~~vIa~~~~e~~g~~~g~~~~lHpnd~Vn~g~SsnDv~~Ta~~L~lr~~ 159 (478)
T 1jsw_A 80 CDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSS 159 (478)
T ss_dssp HHHHSTTTCSTTCCCCCSSCCSTTHHHHHHHHHHHHHHHHHTTTSCCTTSCSSCCCCCCSCSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcchhccCCccchhhccCcccccccHHHHHHHHHHHHcCccccccccccccccccCCCChhhHHHHHHHHHHHHH
Confidence 99999 887788898876 4789998766 47788898 5665 666 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCC
Q 016801 182 IDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTG 261 (382)
Q Consensus 182 l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~ 261 (382)
+..|.+.|..|+++|.+||++|++++||||||+||||||||||||++|+++|.|+++||.+++++++.+||||||+ ||+
T Consensus 160 l~~l~~~L~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~rd~~RL~~~~~~~~~~~lGg~Av-GT~ 238 (478)
T 1jsw_A 160 LIKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATAI-GTG 238 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGCEEECCGGGSCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHTTEECCSCCSS-SSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCeeeccccCccceeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccc-cCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCChHH-------HHHHcCCC-CCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccceeecCCCC
Q 016801 262 LPIDRFM-------TAEALEFT-APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSV 330 (382)
Q Consensus 262 ~~~~~~~-------la~~LG~~-~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~---e~gev~l~~~~ 330 (382)
+++|+++ +++.|||+ .+..|+++++++||+++|++++++.++++|+|||+||++|+|+ |||||.+|+ +
T Consensus 239 ~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gei~lp~-~ 317 (478)
T 1jsw_A 239 LNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPE-L 317 (478)
T ss_dssp SSCTTTHHHHHHHHHHHHHCCCCEECSCSSSBTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTTSCCCEECCC-C
T ss_pred ccCCcchHHHHHHHHHHHcCCCCCcCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCceeEECCC-C
Confidence 9999876 99999999 4788999999999999999999999999999999999999987 699999986 8
Q ss_pred CCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcC
Q 016801 331 STGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKG 369 (382)
Q Consensus 331 ~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~ 369 (382)
++||||||||+||+.+|.++++|++|+|++.+++..+++
T Consensus 318 ~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~ 356 (478)
T 1jsw_A 318 QAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEA 356 (478)
T ss_dssp SCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHHHHhHHHHHHHHHhc
Confidence 999999999999999999999999999999999988886
No 9
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=100.00 E-value=1.5e-77 Score=615.38 Aligned_cols=317 Identities=21% Similarity=0.274 Sum_probs=291.0
Q ss_pred chhhhccc---cCccccccccCCCCcchHHHHHhcccccc---ccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 016801 46 HKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTESIS---YDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRG 119 (382)
Q Consensus 46 ~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~~~---~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~a 119 (382)
+|+|+|.+ ++|. ++|||++ |++.+++|+.+.. +|+.++++++.+|+|||++|+++|+||++++++|.++
T Consensus 28 ~r~e~d~~g~~~vp~-~~~~g~~----t~r~~~~f~~s~~~~~~~~~~i~a~~~v~~A~A~a~~~~Gil~~~~a~aI~~a 102 (488)
T 1yfm_A 28 FRTETDAFGEIHVPA-DKYWGAQ----TQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESLGGLDPKISKAIQQA 102 (488)
T ss_dssp EEEECSSSCCEEEES-SCCCCHH----HHHHHTTCCTTGGGGBCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred cCcccccCCCcCCCc-cchhchH----HHHHHHhccCCCCcccCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 68888876 8898 8999996 9999999998854 7899999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCccccc----CCcchhHHHHHH----HHHHhC-CCC-ceec------cCCChhhHHHHHHHHHHHHHHH
Q 016801 120 LDEIERQIEAGKFMWRT----DREDVHMNIEAA----LTDIIG-EPA-KKLH------TARSRNDQVLTDFRLWCRDAID 183 (382)
Q Consensus 120 l~~i~~~~~~~~f~~~~----~~~dv~~a~e~~----l~e~~G-~~g-~~lH------~G~SsnDi~~Ta~~L~lr~~l~ 183 (382)
|++|..+...++|++++ .++|+||+++.. +.|++| +.| +++| +||||||++||+++|++|+++.
T Consensus 103 ~~ei~~~~~~~~f~~~~~q~g~~t~~nmn~~evia~~a~e~lG~~~g~~~vHp~d~Vn~g~SsNDv~~Ta~~L~lr~~l~ 182 (488)
T 1yfm_A 103 ADEVASGKLDDHFPLVVFQTGSGTQSNMNANEVISNRAIEILGGKIGSKQVHPNNHCNQSQSSNDTFPTVMHIAASLQIQ 182 (488)
T ss_dssp HHHHHHTSSGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHC---------CCCCCCCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccccCCCcchhhccccccccccHHHHHHHHHHHHhCccccCCccCcccCcCCCCChhhHHHHHHHHHHHHHHH
Confidence 99999988788898876 378999876653 468888 666 7777 9999999999999999999998
Q ss_pred -HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCC
Q 016801 184 -TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGL 262 (382)
Q Consensus 184 -~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~ 262 (382)
.|++.|..|+++|.+||++|+|++||||||+|||+||||||+|++|+++|.|+++||++++++++.+||||||+ ||++
T Consensus 183 ~~l~~~L~~L~~~L~~~A~e~~~~v~~GrTHlQ~A~PiT~G~~~~~~~~~l~rd~~RL~~~~~~l~~~~lGgtAv-GT~~ 261 (488)
T 1yfm_A 183 NELIPELTNLKNALEAKSKEFDHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAV-GTGL 261 (488)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTEECTTCTTT-SSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEeeceecCccceEeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccc-cCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCChHH-------HHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cceeecCCCCC
Q 016801 263 PIDRFM-------TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVS 331 (382)
Q Consensus 263 ~~~~~~-------la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e---~gev~l~~~~~ 331 (382)
++|+++ +++.|||+. +.+|+++++++||++++++++++.++++|+|||+||++|+|+| ||||.+|+ .+
T Consensus 262 ~~~~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsS~pr~g~gei~lp~-~~ 340 (488)
T 1yfm_A 262 NTKPGFDVKIAEQISKETGLKFQTAPNRFEALAAHDAIVECSGALNTLACSLFKIAQDIRYLGSGPRCGYHELMLPE-NE 340 (488)
T ss_dssp TSCTTHHHHHHHHHHHHHSSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCC-CS
T ss_pred cCChhHHHHHHHHHHHHhCCCCccCccHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCceeEECCC-CC
Confidence 999865 899999995 7889999999999999999999999999999999999999887 99999985 67
Q ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcC
Q 016801 332 TGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKG 369 (382)
Q Consensus 332 ~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~ 369 (382)
+||||||||+||+.+|.++++|++|+|++.+++.+.++
T Consensus 341 ~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~ 378 (488)
T 1yfm_A 341 PGSSIMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQ 378 (488)
T ss_dssp CCCTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcCCCcccccCcHHHHHHHHHHHHHHhHHHHHHHHHhc
Confidence 99999999999999999999999999999999998776
No 10
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=100.00 E-value=2.7e-77 Score=611.33 Aligned_cols=324 Identities=24% Similarity=0.265 Sum_probs=287.2
Q ss_pred CCchhhhccc---cCccccccccCCCCcchHHHHHhcccc-ccc--cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 016801 44 PKHKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISY--DKALYKHDIMGSKAHASMLAKQGLISDSDKNSIL 117 (382)
Q Consensus 44 ~~~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~--d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~ 117 (382)
.-+|+|+|.+ ++|. ++|||.| |.|++++|+++ ..+ ++.++++++.||+|+|++|+++|+||++++++|.
T Consensus 21 ~~~r~e~d~~g~~~vp~-~~~yG~q----t~Ra~~nf~i~~~~~~~~~~~i~a~~~vk~A~A~an~~~G~l~~~~a~aI~ 95 (478)
T 3ocf_A 21 SMTRREQDSLGERDIPM-DAYFGIQ----TLRAVENFSLSDVALNHIPALVRALAMVKKAAATANYKLRQLPEPKYAAIV 95 (478)
T ss_dssp --CEEEEETTEEEEECT-TCSSCHH----HHHHHHHCCCSSCBGGGSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred CCcccccccCCCccCCc-ccccCHH----HHHHHHhccccCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 4578888876 8898 8999998 99999999876 333 3799999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCccccc---C-CcchhHHH-H---HHHHHHhC-CCCce--ec------cCCChhhHHHHHHHHHHHH
Q 016801 118 RGLDEIERQIEAGKFMWRT---D-REDVHMNI-E---AALTDIIG-EPAKK--LH------TARSRNDQVLTDFRLWCRD 180 (382)
Q Consensus 118 ~al~~i~~~~~~~~f~~~~---~-~~dv~~a~-e---~~l~e~~G-~~g~~--lH------~G~SsnDi~~Ta~~L~lr~ 180 (382)
++|++|..++..++|+++. + ++++||++ | +++.|++| +.|+| +| +||||||++||+++|++|+
T Consensus 96 ~a~~ei~~g~~~~~f~~~~~q~g~gt~~nmnvnevia~~a~e~~G~~~G~~~~vHpndhVn~g~SsNDv~~Ta~~L~~~~ 175 (478)
T 3ocf_A 96 AACDDIIDGLLMEQFVVDVFQGGAGTSSNMNANEVIANRALEHLGRPRGDYQTIHPNDDVNMSQSTNDVYPTAVRLALLL 175 (478)
T ss_dssp HHHHHHHTTTTGGGCCCBTTCSSTTHHHHHHHHHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCccccCCCcchhhccCCccccchHHHHHHHHHHHHhchhcCCCCccCCCCCCCCCCChhhHHHHHHHHHHHH
Confidence 9999999888888898765 2 67888643 3 67889999 67877 88 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCC
Q 016801 181 AIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGT 260 (382)
Q Consensus 181 ~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt 260 (382)
.+..|.+.|..|+++|.+||++|+|++||||||+|||+|+||||+|++|+++|.||++||++++++++.+||||||+ ||
T Consensus 176 ~l~~L~~~L~~L~~~L~~kA~e~~d~v~~GRTHlQ~A~PiTlG~~~~~~a~~l~rd~~RL~~~~~~l~~~~lGgtAv-GT 254 (478)
T 3ocf_A 176 SQNQVQTALHRLIAAFEAKGREFATVIKIGRTQLQDAVPITLGQEFEAFAATLREDTARLEEVAALFREVNLGGTAI-GT 254 (478)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHGGGEECTTC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcEeecccccccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhHhCCCCeee-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCCCCh-------HHHHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccceeecCCC
Q 016801 261 GLPIDR-------FMTAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDS 329 (382)
Q Consensus 261 ~~~~~~-------~~la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~---e~gev~l~~~ 329 (382)
++++|+ +++++.|||+. +.+|.++++++||++++++++++.++++|+|||+||++|+|+ +||||.+| +
T Consensus 255 g~~~~~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp-~ 333 (478)
T 3ocf_A 255 RINASHAYAEQAIVELSQISGIELKATGNLVEASWDTGAFVTFSGILRRIAVKLSKIANDLRLLSSGPRSGLGEIRLP-A 333 (478)
T ss_dssp ------CHHHHHHHHHHHHHTSCCEECSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSSSSCCCEECC-C
T ss_pred CcCCChhHHHHHHHHHHHhcCCCCccCCChhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeEEECC-C
Confidence 999986 45799999995 688999999999999999999999999999999999999987 49999998 5
Q ss_pred CCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcch
Q 016801 330 VSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAY 374 (382)
Q Consensus 330 ~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~ 374 (382)
+++||||||||+||+.+|.++++|++|+|++.+++++.++.++..
T Consensus 334 ~q~GSSiMP~K~NPv~~E~i~~~a~~V~G~~~~i~~a~~~g~lel 378 (478)
T 3ocf_A 334 VQPGSSIMPGKVNPVIPESVNQVCYQVIGNDLTVTMAAESGQLQL 378 (478)
T ss_dssp CSCCBTTBTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTB
T ss_pred CCCcCCCCCcccCcHHHHHHHHHHHHHHhHHHHHHHHHhcCcchh
Confidence 899999999999999999999999999999999998888766553
No 11
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.2e-76 Score=604.17 Aligned_cols=317 Identities=21% Similarity=0.270 Sum_probs=288.2
Q ss_pred Cchhhhccc---cCccccccccCCCCcchHHHHHhcccc-c--cccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 016801 45 KHKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-I--SYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILR 118 (382)
Q Consensus 45 ~~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~--~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~ 118 (382)
.+|+|+|.+ ++|+ ++|||.| |.|++++|+++ . .+++.+|+++..+|+|+|++|.++| ||++.+++|.+
T Consensus 29 ~~r~e~D~~G~~~vp~-~~~~g~q----t~ra~~nf~i~~~~~~~~~~~i~a~~~vkkAaA~an~~~G-l~~~~a~aI~~ 102 (490)
T 3e04_A 29 SFRIEYDTFGELKVPN-DKYYGAQ----TVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYG-LDPKIANAIMK 102 (490)
T ss_dssp CEEEEEETTEEEEEET-TCCCCHH----HHHHHHHCCCSCGGGBCCHHHHHHHHHHHHHHHHHGGGGT-CCHHHHHHHHH
T ss_pred CCCcccccCcCccCcc-hhhhhHH----HHHHHHcccccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-CCHHHHHHHHH
Confidence 478888876 8898 9999999 99999999977 2 5788999999999999999999999 99999999999
Q ss_pred HHHHHHHHhhcCCccccc---C-CcchhH----HHHHHHHHHhC-CCCce--------eccCCChhhHHHHHHHHHHHHH
Q 016801 119 GLDEIERQIEAGKFMWRT---D-REDVHM----NIEAALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRDA 181 (382)
Q Consensus 119 al~~i~~~~~~~~f~~~~---~-~~dv~~----a~e~~l~e~~G-~~g~~--------lH~G~SsnDi~~Ta~~L~lr~~ 181 (382)
+|++|..++..++|+++. + ++++|| ++|+++.|++| +.|+| ||+||||||++||+++|++++.
T Consensus 103 a~~ev~~g~~~~~Fp~~~~q~Gsgt~~nmn~NEvia~ra~e~~G~~~g~~~~vHpndhVn~gqSsND~~~Ta~~l~~~~~ 182 (490)
T 3e04_A 103 AADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIE 182 (490)
T ss_dssp HHHHHHTTSCGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTSCCSSCCCCCCTTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcccCCceeeecCCCCCcccccHHHHHHHHHHHHhCcccCCCCCCCcccccCCCCChhhHHHHHHHHHHHHH
Confidence 999999998888998654 4 667776 46799999999 66765 4469999999999999999988
Q ss_pred HH-HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCC
Q 016801 182 ID-TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGT 260 (382)
Q Consensus 182 l~-~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt 260 (382)
+. .|.+.|.+|+++|.+||++|+|++||||||+|||+|+||||+|++|+++|.|+++||++++++++.+||||||+ ||
T Consensus 183 ~~~~L~~~L~~L~~aL~~kA~e~~d~v~~GRTHlQ~A~PiTlG~~~~~~a~~l~rd~~RL~~~~~~l~~~~lGgtAv-GT 261 (490)
T 3e04_A 183 VHEVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAV-GT 261 (490)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTCTTTSEECTTCTTT-SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCceeeccccCccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc-cC
Confidence 85 69999999999999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred CCCCChHH-------HHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccceeecCCC
Q 016801 261 GLPIDRFM-------TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDS 329 (382)
Q Consensus 261 ~~~~~~~~-------la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~---e~gev~l~~~ 329 (382)
++++++++ +++.|||+. +.+|+++++++||+++|++++++.++++|+|||+||++|+|+ +||||.+| +
T Consensus 262 g~~~~~~~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~ve~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp-~ 340 (490)
T 3e04_A 262 GLNTRIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILP-E 340 (490)
T ss_dssp CTTSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECC-C
T ss_pred CCcCChhHHHHHHHHHHHHhCCCCcCCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEECC-C
Confidence 99998755 999999997 688999999999999999999999999999999999999986 49999998 5
Q ss_pred CCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcC
Q 016801 330 VSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKG 369 (382)
Q Consensus 330 ~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~ 369 (382)
+++||||||||+||+.+|.++++|++|+|++.+++.+..+
T Consensus 341 ~~~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~ai~~a~~~ 380 (490)
T 3e04_A 341 NEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSN 380 (490)
T ss_dssp CSCC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999999999999999999999876554
No 12
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=100.00 E-value=6.1e-76 Score=600.40 Aligned_cols=319 Identities=22% Similarity=0.262 Sum_probs=294.1
Q ss_pred Cchhhhccc---cCccccccccCCCCcchHHHHHhcccc-ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 016801 45 KHKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGL 120 (382)
Q Consensus 45 ~~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al 120 (382)
.+|+|+|.+ ++|+ ++|||.| |.|++++|+++ ..+|+.++++++.+|+|+|++|.++|+||++.+++|.++|
T Consensus 24 ~~r~e~d~~g~~~vp~-~~~~g~q----t~Ra~~nf~i~~~~~~~~~i~a~~~vk~AaA~an~~~G~l~~~~a~aI~~a~ 98 (482)
T 3gtd_A 24 NYRIESDSFGEIQIEE-KFYWGAQ----TQRSLNNFKISKQKMPKILIRALAILKKCAAQVNYEFGDLEYKIATSIDKAI 98 (482)
T ss_dssp CEEEEEETTEEEEEET-TCCCCHH----HHHHHHHCCCCSCBCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred cCcCccccCCCccCCc-ccccCHH----HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 578888876 8898 8999999 99999999976 6788999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCccccc---C-CcchhH----HHHHHHHHHhC-CCCce--------eccCCChhhHHHHHHHHHHHHHHH
Q 016801 121 DEIERQIEAGKFMWRT---D-REDVHM----NIEAALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRDAID 183 (382)
Q Consensus 121 ~~i~~~~~~~~f~~~~---~-~~dv~~----a~e~~l~e~~G-~~g~~--------lH~G~SsnDi~~Ta~~L~lr~~l~ 183 (382)
++|..++..++|+++. + +++.|| .+++++.|++| +.|+| ||+||||||++||+++|++++.+.
T Consensus 99 ~ev~~g~~~~~fp~~~~q~gsGt~~Nmn~NevIa~ra~e~~G~~~g~~~~vHpndhVn~gqSsND~~~Ta~~l~~~~~~~ 178 (482)
T 3gtd_A 99 DRILAGEFEDNFPLVVWQTGSGTQTNMNMNEVIASIANEELTGKKGGKFPVHPNDHVNKGQSSNDSFPTAMHIATVLATK 178 (482)
T ss_dssp HHHHHTTTTTSCCCBSSSCTTCHHHHHHHHHHHHHHHHHHHHSCCCSSSSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcccCCCeehhccCCCccccchHHHHHHHHHHHHhCcccCCcCcCCccccCCCCCChhhHHHHHHHHHHHHHHH
Confidence 9999998889998765 3 556664 35689999998 66654 557999999999999999999985
Q ss_pred -HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCC
Q 016801 184 -TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGL 262 (382)
Q Consensus 184 -~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~ 262 (382)
.|.+.|..|+++|.+||++|+|++|+||||+|||+|+||||+|++|+++|.|+++||++++++++.+||||||+ ||++
T Consensus 179 ~~L~~~L~~L~~~L~~kA~e~~d~v~~GrTHlQ~A~P~TlG~~~~~~~~~l~rd~~RL~~~~~~l~~~~lGgtAv-GT~~ 257 (482)
T 3gtd_A 179 QQLIPALNNLLTYLQDKSKDWDKIIKIGRTHLQDATPLTLKQEFSGYITQIEYALERIEDALKKVYLLAQGGTAV-GTGI 257 (482)
T ss_dssp HTHHHHHHHHHHHHHHHHTTGGGCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHTTTTEECTTCTTT-SSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcEeeccccCccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc-cCCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred CCChH-------HHHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccceeecCCCCC
Q 016801 263 PIDRF-------MTAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVS 331 (382)
Q Consensus 263 ~~~~~-------~la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~---e~gev~l~~~~~ 331 (382)
+++++ ++++.|||+. +.+|+++++++||+++|++++++.++++|+|||+||++|+|+ +||||.+| +++
T Consensus 258 ~~~~~~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp-~~~ 336 (482)
T 3gtd_A 258 NSKIGFDIKFAQKVAEFTQQPFKTAPNKFESLAAHDALVEFSGTLNTIAVSLMKIANDIRLLGSGPRCGLGELHLP-ENE 336 (482)
T ss_dssp TSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECC-CCS
T ss_pred cCCchhHHHHHHHHHHHhCCCCccccchhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCeeEEECC-CCC
Confidence 99875 5999999997 678999999999999999999999999999999999999986 49999998 579
Q ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCC
Q 016801 332 TGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGL 370 (382)
Q Consensus 332 ~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~ 370 (382)
+||||||||+||+.+|.++++|++|+|++.+++.+..+.
T Consensus 337 ~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g 375 (482)
T 3gtd_A 337 PGSSIMPGKVNPTQVEALTMVCTQVMGNHVTVTIAGSNG 375 (482)
T ss_dssp CCCSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999998766543
No 13
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.6e-75 Score=598.68 Aligned_cols=329 Identities=19% Similarity=0.224 Sum_probs=294.3
Q ss_pred Cchhhhccc---cCccccccccCCCCcchHHHHHhcccc-ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 016801 45 KHKTVLCKM---SASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGL 120 (382)
Q Consensus 45 ~~r~~~~~~---~~p~~~~lwg~~~~~~~~~~~~~f~~~-~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al 120 (382)
++|+|+|.+ ++|. ++|||.| |.|++++|+++ ..+++.+|+++..||+|+|++|.++|+||++.+++|.++|
T Consensus 35 ~~r~e~d~~g~~~vp~-~~~~g~q----t~ra~~nf~i~~~~~~~~~i~a~~~vk~AaA~an~~lG~l~~~~a~aI~~A~ 109 (495)
T 4hgv_A 35 STRTETDTFGPIEVAS-DRYWGAQ----AQRSLGNFKIGWEKQPLAIVRALGIVKQAAARANMALGRLDPAIGDAIVKAA 109 (495)
T ss_dssp CEEEEEETTEEEEEET-TCCCCHH----HHHHHHHCCCCSCBCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred CCeeeecCCCCccCCC-ccchHHH----HHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 678899876 8899 9999999 99999999976 6788999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCccccc---C-CcchhH-HHH---HHHHHHhC-C--------CCceeccCCChhhHHHHHHHHHHHHHH-
Q 016801 121 DEIERQIEAGKFMWRT---D-REDVHM-NIE---AALTDIIG-E--------PAKKLHTARSRNDQVLTDFRLWCRDAI- 182 (382)
Q Consensus 121 ~~i~~~~~~~~f~~~~---~-~~dv~~-a~e---~~l~e~~G-~--------~g~~lH~G~SsnDi~~Ta~~L~lr~~l- 182 (382)
+||..++..++|+++. + ++..|| +|| +++.|++| + ++++||+||||||++|||++|++++.+
T Consensus 110 ~ei~~g~~~~~F~~d~~q~gsgt~~nmn~nevian~a~e~lg~~~g~~~~vhpnd~Vh~gqSsnDv~~TA~~l~~~~~~~ 189 (495)
T 4hgv_A 110 QEVIDGKLDEHFPLVVWQTGSGTQSNMNANEVVSNRAIELLGGVMGSKKPVHPNDHVNMSQSSNDTYPTAMHIACAERVI 189 (495)
T ss_dssp HHHHTTSSGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTTTCSCCCCCCCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCchhhccchhhhhhccccccCcchhHHHHHHHHHHcCcccCCCCCCCHHHhccCCCChhhHHHHHHHHHHHHHHH
Confidence 9999999899998765 3 445554 444 78888887 3 335699999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCC
Q 016801 183 DTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGL 262 (382)
Q Consensus 183 ~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~ 262 (382)
+.|++.|..|+++|.+||++|++++|+||||+|||+|+||||+|++|+++|.|+++||+++++++..+++||||+ ||+.
T Consensus 190 ~~L~~~L~~L~~~L~~kA~~~~~~~~~GRTHlQ~A~P~TlG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGgtAv-Gtg~ 268 (495)
T 4hgv_A 190 HDLLPALKHLHKALEEKVKAFDHIIKIGRTHTQDATPLTLGQEFSGYAAQVASSIKRIEMTLPGLCELAQGGTAV-GTGL 268 (495)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTHHHHTEECTTCTTT-SSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeeecccCCCCceeecHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchh-hhcc
Confidence 569999999999999999999999999999999999999999999999999999999999999999999999998 8877
Q ss_pred CCCh-------HHHHHHcCCCC-CCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cceeecCCCCC
Q 016801 263 PIDR-------FMTAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVS 331 (382)
Q Consensus 263 ~~~~-------~~la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e---~gev~l~~~~~ 331 (382)
+.++ +.+++.+||.+ +.+|+++|+++||++++++++++.++++|+|||+|||+|+|+| ++|+.+| +++
T Consensus 269 ~~~~~~~~~v~~~la~~~gl~f~~a~n~~~~~~~rD~~~e~~~~L~~la~~L~Kia~Dirll~S~~~~g~~Ei~~p-~~q 347 (495)
T 4hgv_A 269 NAPVGFAEKVAEEIAAITGIGFTSAPNKFEALAAHDSMVFSHGAINATAAALFKIANDIRFLGSGPRSGLGELSLP-ENE 347 (495)
T ss_dssp TSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECC-CCS
T ss_pred cCchhHHHHHHHHHHHHhCCCccccCCHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEEecC-cCC
Confidence 6653 35788889985 6789999999999999999999999999999999999999987 4566664 789
Q ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 332 TGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 332 ~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
+||||||||+||+.+|.++++|++|+|++.++..+.++.++++|.|.++
T Consensus 348 ~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~~~~e~n~~~~~ 396 (495)
T 4hgv_A 348 PGSSIMPGKVNPTQCEALTQVCVQVFGNHAALTFAGSQGHFELNVYNPL 396 (495)
T ss_dssp CCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHH
T ss_pred cccccCccccChHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchH
Confidence 9999999999999999999999999999999999999999999988765
No 14
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=100.00 E-value=1.4e-72 Score=576.26 Aligned_cols=306 Identities=24% Similarity=0.304 Sum_probs=260.9
Q ss_pred cccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcc--ccc
Q 016801 59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFM--WRT 136 (382)
Q Consensus 59 ~~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~--~~~ 136 (382)
+.+|++||.. .+....| .|+.++++++.+++|||++|+++|+||++.+++|.++|++|...+..+.+. ...
T Consensus 5 ~~~~~~ry~~--~~~~~~~-----sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~ 77 (454)
T 1q5n_A 5 SQLYASLFYQ--RDVTEIF-----SDRALVSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTAIDKIDFDALATATGL 77 (454)
T ss_dssp -CTTHHHHSC--HHHHHHT-----SHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTHHHHCCHHHHHHHHHH
T ss_pred CCccccccCc--HHHHHHc-----CcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhhhcCCHHHHHHHhhc
Confidence 5689889865 2333344 466999999999999999999999999999999999999775332111111 112
Q ss_pred CCcchhHHHHHHHHHHh----CCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q 016801 137 DREDVHMNIEAALTDII----GEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYT 212 (382)
Q Consensus 137 ~~~dv~~a~e~~l~e~~----G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrT 212 (382)
..||+ +++|..+.+++ |+.++|||+||||||++||+++|++|+.+..|.+.|..|+++|.+||++|+|++|||||
T Consensus 78 ~~~dV-ia~~~~l~e~~g~~~g~~~~~vH~g~SsnD~~~Ta~~L~~r~~l~~l~~~l~~L~~~L~~~A~~~~~~~~~GrT 156 (454)
T 1q5n_A 78 AGNIA-IPFVKQLTAIVKDADEDAARYVHWGATSQDILDTACILQCRDALAIVQNQVQQCYETALSQAQTYRHQVMMGRT 156 (454)
T ss_dssp HSSSH-HHHHHHHHHHHHTTCTTGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cCCcH-HHHHHHHHHHhccccCCccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccc
Confidence 36788 78999999999 78899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCC------ChHHHHHHcCCCCCCCCchhhc
Q 016801 213 HLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPI------DRFMTAEALEFTAPMRNSIDAV 286 (382)
Q Consensus 213 HlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~------~~~~la~~LG~~~~~~n~~~~~ 286 (382)
|+||||||||||||++|+++|.|+++||.+++++++.+|||| |+ ||+.+. +++++++.|||+.+.. +++
T Consensus 157 HlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-Av-GT~~~~~~~~~~~~~~~a~~LG~~~~~~---~~~ 231 (454)
T 1q5n_A 157 WLQQALPITLGHKLARWASAFKRDLDRINAIKARVLVAQLGG-AV-GSLASLQDQGSIVVEAYAKQLKLGQTAC---TWH 231 (454)
T ss_dssp TTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHSBCCCCC-TT-SSCGGGTTCHHHHHHHHHHHHTCBCCSS---CCS
T ss_pred cCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-Hh-hcCcccccccHHHHHHHHHHhCcCCCCC---CCc
Confidence 999999999999999999999999999999999999999997 55 887744 7899999999997653 357
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHH
Q 016801 287 SDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLT 365 (382)
Q Consensus 287 ~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~ 365 (382)
.+||++++++++++.++++|+|||+||++|++.||||+.+|. ++++||||||||+||+.+|.++++|++|+|++.+++.
T Consensus 232 ~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~ 311 (454)
T 1q5n_A 232 GERDRIVEIASVLGIITGNVGKMARDWSLMMQTEIAEVFEPTAKGRGGSSTMPHKRNPVAAASVLAAANRVPALMSSIYQ 311 (454)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECCC-------------CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhccccccCCCCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999875 4899999999999999999999999999999998874
Q ss_pred HHcCCCcchhhhhcc
Q 016801 366 LCKGLPLAYNRDLQT 380 (382)
Q Consensus 366 ~~~~~p~~~~rD~qe 380 (382)
++|.+||||+|+
T Consensus 312 ---~~~~~~erd~~~ 323 (454)
T 1q5n_A 312 ---SMVQEHERSLGA 323 (454)
T ss_dssp ---TTCCCTTSCSSH
T ss_pred ---hccchhcccccc
Confidence 699999999997
No 15
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=100.00 E-value=7e-72 Score=570.59 Aligned_cols=299 Identities=23% Similarity=0.265 Sum_probs=258.1
Q ss_pred cccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCccc----
Q 016801 59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMW---- 134 (382)
Q Consensus 59 ~~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~---- 134 (382)
+.+|++||+. .+....| .|+.++++++.+++|||++|+++|+||++.+++|.++|++ ++|.+
T Consensus 5 ~~~~~~ry~~--~~~~~~~-----sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~-------~~~~~~~~~ 70 (451)
T 3c8t_A 5 SPLYGRSFAD--DKMRELF-----SAQSFISRCVETEVALARAQARLGIIPEDAAAGITAAART-------FAPEMERLR 70 (451)
T ss_dssp -CCSSCCCSC--HHHHHHT-----SHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH-------CCCCHHHHH
T ss_pred CCccccccCc--HHHHHHc-----CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhhh-------cCCCHHHHH
Confidence 5689999975 2334444 4569999999999999999999999999999999999874 12221
Q ss_pred ---ccCCcchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Q 016801 135 ---RTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGY 211 (382)
Q Consensus 135 ---~~~~~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~Gr 211 (382)
....+|| +++|..+.+++|+.|++||+||||||++||+++|++|+.+..|.+.|..|+++|.+||++|++++||||
T Consensus 71 ~~~~~~~~dV-ia~~~~l~e~~g~~g~~vH~g~SsnDv~~Ta~~L~lr~~l~~l~~~l~~L~~~L~~~A~~~~~~~~~Gr 149 (451)
T 3c8t_A 71 DDTEIVGYPI-LPLVEQLSAHAGEAGKYLHWGATTQDIMDTATVLQIRDGLALISRRIESVRKALAALARNHRDTPMAGR 149 (451)
T ss_dssp HHHHHHSSSH-HHHHHHHHHHHGGGGGGSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHhhcCCCcH-HHHHHHHHHHcccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCceeecc
Confidence 1236788 689999999999778999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCC------ChHHHHHHcCCCCCCCCchhh
Q 016801 212 THLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPI------DRFMTAEALEFTAPMRNSIDA 285 (382)
Q Consensus 212 THlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~------~~~~la~~LG~~~~~~n~~~~ 285 (382)
||+||||||||||+|++|+++|.|+++||.+++++++.+|||| |+ ||+.++ +++++++.|||+.+.. ++
T Consensus 150 THlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-Av-GT~~~~~~~~~~~~~~~a~~LGl~~~~~---~~ 224 (451)
T 3c8t_A 150 THLQHALPVTFGYKAAVWLSAFDRHAARLEEISPRVLVVEFSG-AS-GTLASLGTRGLDVQRELARELNLGVPSI---TW 224 (451)
T ss_dssp ETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCBCCCCC-TT-SSCGGGTTCHHHHHHHHHHHHTCBCCSS---CC
T ss_pred cCCCCceeehHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hh-hcCcccccccHHHHHHHHHHhCCCCCCC---CC
Confidence 9999999999999999999999999999999999999999997 65 888887 7899999999997653 35
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHH
Q 016801 286 VSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLL 364 (382)
Q Consensus 286 ~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~ 364 (382)
+.+||++++++++++.++++|+|||+||++|++.||||+.+|. ++++||||||||+||+.+|.++++|++|+|++.+++
T Consensus 225 ~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~ 304 (451)
T 3c8t_A 225 HSARDAVAETVQFLALVSGSLGKLAMDISIMMTTELGEVAEPFVRHRGASSTMPQKQNPVSCELILAGARIVRNHATSML 304 (451)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECC---------------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999999999999999999999999999999999875 489999999999999999999999999999999988
Q ss_pred HHHcCCCcchhhhhcc
Q 016801 365 TLCKGLPLAYNRDLQT 380 (382)
Q Consensus 365 ~~~~~~p~~~~rD~qe 380 (382)
.+ +|.+||||+|+
T Consensus 305 ~~---~~~~~erd~~~ 317 (451)
T 3c8t_A 305 DA---MIHDFERATGP 317 (451)
T ss_dssp HH---TCCCTTCCHHH
T ss_pred hc---Cchhhcccccc
Confidence 54 89999999997
No 16
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=100.00 E-value=1.2e-71 Score=565.69 Aligned_cols=284 Identities=20% Similarity=0.213 Sum_probs=258.1
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH----HHHHHHhhcCCcccccCCcchhHHHHHHHHHHhCCCC
Q 016801 82 SYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGL----DEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPA 157 (382)
Q Consensus 82 ~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al----~~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G~~g 157 (382)
+.|++++++++.+|+||+++|+++|+||++.+++|.++| +.+..+.. ...||+ +++|..+.+++|+.|
T Consensus 13 ~sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~d~~~i~~~~~-------~~~~dV-ia~~~~l~e~~g~~g 84 (429)
T 1c3c_A 13 WTEEAKYRRWLEVELAVTRAYEELGMIPKGVTERIRNNAKIDVELFKKIEE-------KTNHDV-VAFVEGIGSMIGEDS 84 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHCCCCHHHHHHHHH-------HHCCHH-HHHHHHHHHHHGGGG
T ss_pred cChHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhCCCCHHHHHHHHh-------ccCCCh-HHHHHHHHHHcCccc
Confidence 345699999999999999999999999999999999995 55554421 236788 789999999999778
Q ss_pred ceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHH
Q 016801 158 KKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDA 237 (382)
Q Consensus 158 ~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~ 237 (382)
+|||+||||||++||+++|++|+.+..|.+.|..|+++|.++|++|+|++||||||+||||||||||+|++|+++|.|++
T Consensus 85 ~~vH~g~SsnD~~~Ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~ 164 (429)
T 1c3c_A 85 RFFHYGLTSSDVLDTANSLALVEAGKILLESLKEFCDVLWEVANRYKHTPTIGRTHGVHAEPTSFGLKVLGWYSEMKRNV 164 (429)
T ss_dssp GGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred ccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCcCCCcCcCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCcccccCCCCCCCh---HHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016801 238 GRLQDCRVRMNFCPLGACALAGTGLPIDR---FMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWV 314 (382)
Q Consensus 238 ~rL~~~~~~~~~~~lGggA~aGt~~~~~~---~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ 314 (382)
+||.+++++++.+|||| |+ ||+.++++ +++++.|||+.+..| |++.+||++++++++++.++++|+|||+||+
T Consensus 165 ~rL~~~~~~~~~~~lGg-Av-Gt~~~~~~~~~~~~a~~LGl~~~~~~--d~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ 240 (429)
T 1c3c_A 165 QRLERAIEEVSYGKISG-AV-GNYANVPPEVEEKALSYLGLKPEPVS--TQVVPRDRHAFYLSTLAIVAAGIERIAVEIR 240 (429)
T ss_dssp HHHHHHHHHTCEECCCC-TT-SSCSSSCHHHHHHHHHHTTCEECSSC--SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCch-hh-cCCccCCHHHHHHHHHHcCCCCCCCC--cCccCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 55 99888877 899999999976554 6888999999999999999999999999999
Q ss_pred HhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 315 LWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 315 llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
+|++.||||+.+|. ++++||||||||+||+.+|.++++|++|+|++.+++. ++|.+||||+|+
T Consensus 241 ll~~~e~~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~---~~~~~~erd~~~ 304 (429)
T 1c3c_A 241 HLQRTEVLEVEEPFRKGQRGSSAMPHKKNPITCERLTGLSRMMRAYVDPSLE---NIALWHERDISH 304 (429)
T ss_dssp HHTSTTTCSEECCCCC-----CCCTTCCCCHHHHHHHHHHHHHHHTHHHHHH---TTCCSTTCCSHH
T ss_pred HHhccccchhccccccCCCcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh---cCCccccccccc
Confidence 99999999999875 4899999999999999999999999999999998855 589999999997
No 17
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=100.00 E-value=3e-71 Score=564.78 Aligned_cols=285 Identities=23% Similarity=0.257 Sum_probs=262.8
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH----HHHHHHhhcCCcccccCCcchhHHHHHHHHHHh--C
Q 016801 81 ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGL----DEIERQIEAGKFMWRTDREDVHMNIEAALTDII--G 154 (382)
Q Consensus 81 ~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al----~~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~--G 154 (382)
++.|++++++++.+++|||++|+++|+||++.+++|.++| +.+..+.. ...+|+ +++|..+.+++ |
T Consensus 22 i~sd~~~i~~~~~v~~A~a~a~~~~G~i~~~~a~~I~~a~~~d~~~i~~~~~-------~~~~dV-ia~~~~l~e~~g~g 93 (444)
T 2pfm_A 22 IWTEENKFKAWLEVEILACEAWAELGDIPKEDVKKIREHASFDIDRIYEIEK-------ETRHDV-VAFTRAVSETPALG 93 (444)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHCCCCHHHHHHHHH-------HHCCHH-HHHHHHHHTCTTCC
T ss_pred HcChHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhCCCCHHHHHHHhc-------cCCCCH-HHHHHHHHHHcCCC
Confidence 3456799999999999999999999999999999999985 55544421 246788 78999999999 7
Q ss_pred CCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHH
Q 016801 155 EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLE 234 (382)
Q Consensus 155 ~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~ 234 (382)
+.|+|||+||||||++||+++|++|+++..|.+.|..|+++|.++|++|++++||||||+||||||||||+|++|+++|.
T Consensus 94 ~~g~~vH~g~SsnDv~~Ta~~L~lr~~l~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~ 173 (444)
T 2pfm_A 94 EERKWVHYGLTSTDVVDTALSYILKQANEIILKDLENFVSILANKAKEHKYTIMMGRTHGVHAEPTTFGLKLGLWYEEMK 173 (444)
T ss_dssp GGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHH
T ss_pred cccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccCCccceeccHHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccCCcccccCCCCCCCh---HHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHH
Q 016801 235 RDAGRLQDCRVRMNFCPLGACALAGTGLPIDR---FMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGE 311 (382)
Q Consensus 235 r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~---~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~ 311 (382)
|+++||.+++++++.+|||| |+ ||+.++++ +++++.|||+.+..| |++.+||++++++++++.++++|+|||+
T Consensus 174 r~~~rL~~~~~~~~~~~lGg-Av-Gt~~~~~~~~~~~~a~~LGl~~~~~~--d~~~~rD~~~e~~~~l~~la~~L~kia~ 249 (444)
T 2pfm_A 174 RNVERFKQAANTVRVGKLSG-AV-GTYANIDPFVEKYVCENLGLEAAPIS--TQTLQRDRHAHYMSTLALIATSIEKMAV 249 (444)
T ss_dssp HHHHHHHHHHHHTCEECCCC-TT-SSCTTSCHHHHHHHHHHTTCEECSSC--SSSCCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCCch-hh-ccCCcCCHHHHHHHHHHhCCCCCCCC--cCccCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999997 55 99888876 899999999976554 6888999999999999999999999999
Q ss_pred HHHHhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 312 EWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 312 Dl~llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
||++|++.||||+.+|. ++++||||||||+||+.+|.++++|++|+|++.+++. ++|.+||||+|+
T Consensus 250 Dl~ll~~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~---~~~~~~erd~~~ 316 (444)
T 2pfm_A 250 EIRGLQKSETREVEEAFAKGQKGSSAMPHKRNPIGSENMTGLARVIRGYMMTAYE---NVPLWHERDISH 316 (444)
T ss_dssp HHHHHTSTTTCSEECCCCTTCCSCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHH---TSCCCTTCCSHH
T ss_pred HHHHHhcccccccccccccCCCcCccCCcccCCHHHHHHHHHHHHHHHHHHHHHH---hCcccccccccc
Confidence 99999999999999875 4899999999999999999999999999999998855 579999999997
No 18
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=100.00 E-value=5.4e-71 Score=561.34 Aligned_cols=282 Identities=18% Similarity=0.219 Sum_probs=246.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH----HHHHHhhcCCcccccCCcchhHHHHHHHHHHhCCC-Cc
Q 016801 84 DKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLD----EIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEP-AK 158 (382)
Q Consensus 84 d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~----~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G~~-g~ 158 (382)
|...++++++|+.|+++++++ |+||++.+++|.++++ ++.+. ....+||++ ++|+.+.+.+|+. ++
T Consensus 16 ~~~~~~~~l~ve~Ala~a~~~-GlIp~~~~~~i~~~~~~d~~~i~~~-------e~~~~hdV~-a~~~~l~e~~g~~~~~ 86 (438)
T 4eei_A 16 DENKYAKMLEVELAILEALED-RMVPKGTAAEIRARAQIRPERVDEI-------EKVTKHDII-AFCTSIAEQFTAETGK 86 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG-TTSCTTHHHHHHHHCCCCHHHHHHH-------HHHHSCHHH-HHHHHHHTTSCTTTTT
T ss_pred hHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHhhCCCCHHHHHHH-------HHhcCCCHH-HHHHHHHHHcCHHhhc
Confidence 447899999999999999999 9999999999987741 12111 112478884 8999999999966 99
Q ss_pred eeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHH
Q 016801 159 KLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAG 238 (382)
Q Consensus 159 ~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~ 238 (382)
|||+|+||||++||+++|++|+.+..|.+.|..|+++|.++|++|+|++||||||+||||||||||+|++|+++|.||++
T Consensus 87 ~iH~G~SsnDv~~Ta~~L~lr~~~~~l~~~L~~l~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~ 166 (438)
T 4eei_A 87 FFHFGVTSSDIIDSALSLQIRDSMSYVIKDLEALCDSLLTKAEETKEIITMGRSHGMFAEPMSFGQKFLGAYVEFKRRLK 166 (438)
T ss_dssp TTTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEETHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccCccCCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCcccccCCCCCCCh---HHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016801 239 RLQDCRVRMNFCPLGACALAGTGLPIDR---FMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVL 315 (382)
Q Consensus 239 rL~~~~~~~~~~~lGggA~aGt~~~~~~---~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~l 315 (382)
||++++++++.+||| ||+ ||+.++++ +++++.|||+.. +|+ +++.+||++++++++++.++++|+|||+||++
T Consensus 167 rL~~~~~~~~~~~lg-GAv-GT~~~~~~~~~~~~a~~LG~~~~-~~~-~~v~~rD~~~e~~~~l~~~a~~L~kia~Di~l 242 (438)
T 4eei_A 167 DLKDFQKDGLTVQFS-GAV-GNYCILTTEDEKKAADILGLPVE-EVS-TQVIPRDRIAKLISIHGLIASAIERLAVEIRH 242 (438)
T ss_dssp HHHHHHHTTCCBCCC-CTT-SCCSSSCHHHHHHHHHHHTCCBC-SSC-SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHhcCc-cHh-hCcccccHHHHHHHHHHcCCCCC-Ccc-ccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 576 99999998 789999999843 454 78999999999999999999999999999999
Q ss_pred hcccccceeecC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhccC
Q 016801 316 WASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQTG 381 (382)
Q Consensus 316 lss~e~gev~l~-~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe~ 381 (382)
|++.||||+.+| +++++||||||||+||+.+|.++++|++|+|+..+ .++++|++||||+|+.
T Consensus 243 l~~~e~gel~~~f~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~---~~~~~~~~~erdl~~~ 306 (438)
T 4eei_A 243 LHRSDVFEVYEGFSKGQKGSSTMPHKKNPISTENLTGMARMLRSHVSI---ALENCVLWHERDISHS 306 (438)
T ss_dssp HHSTTTCSEECCC------------CCCCHHHHHHHHHHHHHHHHHHH---HHHTTCCCTTCCSHHH
T ss_pred HhccccceeccccccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHH---HHhccchhcCccchhh
Confidence 999999999986 67899999999999999999999999999999853 5779999999999964
No 19
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=100.00 E-value=7.9e-71 Score=555.39 Aligned_cols=290 Identities=22% Similarity=0.248 Sum_probs=249.0
Q ss_pred ccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH---HHHHHHHhhcCCcccccCC
Q 016801 62 WGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRG---LDEIERQIEAGKFMWRTDR 138 (382)
Q Consensus 62 wg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~a---l~~i~~~~~~~~f~~~~~~ 138 (382)
|++||.. +.+.. ++.|++++++++.+|+|||++|+++|+||++.+++|.++ ++.+..+ .....
T Consensus 6 ~~~ry~~---~~~~~----i~sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~d~~~~~~~-------~~~~~ 71 (403)
T 1dof_A 6 FDWRYGS---EEIRR----LFTNEAIINAYLEVERALVCALEELGVAERGCCEKVNKASVSADEVYRL-------ERETG 71 (403)
T ss_dssp GGTTSSC---HHHHT----TSSHHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHCCCCTTTC---------------
T ss_pred cccccCc---HHHHH----HcChHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHH-------hhccC
Confidence 6667753 33432 456789999999999999999999999999999999877 1111111 01135
Q ss_pred cchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccc
Q 016801 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (382)
Q Consensus 139 ~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~ 218 (382)
+|+ +++|..+.+++| |++||+||||||++||+++|++|+.+..|.+.|..|+++|.+||++|+|++||||||+||||
T Consensus 72 ~dV-ia~~~~l~e~~G--g~~vH~g~SsnD~~~Ta~~l~~r~~l~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~ 148 (403)
T 1dof_A 72 HDI-LSLVLLLEQKSG--CRYVHYGATSNDIIDTAWALLIRRALAAVKEKARAVGDQLASMARKYKTLEMVGRTHGQWAE 148 (403)
T ss_dssp CHH-HHHHHHHHHHHC--CSCTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEE
T ss_pred CcH-HHHHHHHHHHcC--CCcccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccCcccc
Confidence 777 689999999999 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCC------ChHHHHHHcCCCCCCCCchhhcc-chHH
Q 016801 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPI------DRFMTAEALEFTAPMRNSIDAVS-DRDF 291 (382)
Q Consensus 219 P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~------~~~~la~~LG~~~~~~n~~~~~~-~rD~ 291 (382)
||||||+|++|+++|.|| +||++++++++.+|||| |+ ||+.+. +++++++.|||+.+. .+++. +||+
T Consensus 149 P~T~G~~~~~~~~~l~r~-~rL~~~~~~~~~~~lGg-Av-Gt~~~~~~~~~~~~~~~a~~lGl~~~~---~~~~~~~rD~ 222 (403)
T 1dof_A 149 PITLGFKFANYYYELYIA-CRQLALAEEFIRAKIGG-AV-GTMASWGELGLEVRRRVAERLGLPHHV---ITTQVAPRES 222 (403)
T ss_dssp EEEHHHHHHHHHHHHHHH-HHHHHHHHHHCCBCCCC-TT-SSCGGGGGGHHHHHHHHHHHTTCCBCS---SCSSSCCHHH
T ss_pred cCcHHHHHHHHHHHHHHH-HHHHHHHHHhcccCccH-HH-hhCcccccccHHHHHHHHHHhCcCCCC---CcchhhccHH
Confidence 999999999999999999 99999999999999997 55 887755 788999999999754 45677 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCC
Q 016801 292 VLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLP 371 (382)
Q Consensus 292 ~~e~~~~l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p 371 (382)
++|++++++.++++|+|||+||++|++.|||||++| . +||||||||+||+.+|.++++|++|+|++.+++. ++|
T Consensus 223 ~~e~~~~l~~~a~~L~kia~Dl~ll~~~e~~ei~lp--~-~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~---~~~ 296 (403)
T 1dof_A 223 FAVLASALALMAAVFERLAVEIRELSRPEIGEVVEG--G-GGSSAMPHKANPTASERIVSLARYVRALTHVAFE---NVA 296 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCSEESC--C----------CCCHHHHHHHHHHHHHHHHHHHHHH---TTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCccCeEeCC--C-CccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH---cCc
Confidence 999999999999999999999999999999999997 5 9999999999999999999999999999998855 689
Q ss_pred cchhhhhcc
Q 016801 372 LAYNRDLQT 380 (382)
Q Consensus 372 ~~~~rD~qe 380 (382)
.+||||+|+
T Consensus 297 ~~~erd~~~ 305 (403)
T 1dof_A 297 LWHERDLTN 305 (403)
T ss_dssp CCTTCCGGG
T ss_pred ccccccccc
Confidence 999999997
No 20
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=100.00 E-value=5.7e-71 Score=563.84 Aligned_cols=284 Identities=28% Similarity=0.327 Sum_probs=252.3
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccc-------cCCcchhHHHHHHHHHHh
Q 016801 81 ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWR-------TDREDVHMNIEAALTDII 153 (382)
Q Consensus 81 ~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~-------~~~~dv~~a~e~~l~e~~ 153 (382)
++.|+.++++++.+++|||++|+++|+||++++++|.++|++ ++|+++ ...+|++ ++|..+.+++
T Consensus 18 i~s~~~~i~~~~~v~~A~a~a~~~~G~i~~~~a~~I~~a~~~-------~~f~~~~~~~~~~~~~~dV~-a~~~~l~e~~ 89 (450)
T 1re5_A 18 IFSDRGRLQGMLDFEAALARAEASAGLVPHSAVAAIEAACQA-------ERYDTGALANAIATAGNSAI-PLVKALGKVI 89 (450)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHCCG-------GGSCHHHHHHHHHHHSSSHH-HHHHHHHHHH
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhc-------CCCCHHHHHHHHhccCccHH-HHHHHHHHHh
Confidence 445679999999999999999999999999999999999853 112211 2378886 8898899999
Q ss_pred C---CC-CceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHH
Q 016801 154 G---EP-AKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAY 229 (382)
Q Consensus 154 G---~~-g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~ 229 (382)
| +. ++|||+||||||++||+++|++|+.+..|.+.|..|+++|.+||++|+|++||||||+||||||||||||++|
T Consensus 90 g~~~~~~~~~vh~g~SsnD~~~Ta~~l~lr~~l~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~ 169 (450)
T 1re5_A 90 ATGVPEAERYVHLGATSQDAMDTGLVLQLRDALDLIEADLGKLADTLSQQALKHADTPLVGRTWLQHATPVTLGMKLAGV 169 (450)
T ss_dssp HHHCGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHH
T ss_pred CCCCCcccccccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCccCccCcHHHHHHHH
Confidence 8 66 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCCh------HHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHH
Q 016801 230 VEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDR------FMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIA 303 (382)
Q Consensus 230 a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~------~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la 303 (382)
+++|.|+++||.+++++++.+|||| |+ ||+.++++ +++++.|||+.+.. +|+++||++++++++++.++
T Consensus 170 ~~~l~r~~~rL~~~~~~~~~~~lGG-Av-Gt~~~~~~~~~~~~~~la~~LG~~~~~~---~~~~~rD~~~e~~~~l~~la 244 (450)
T 1re5_A 170 LGALTRHRQRLQELRPRLLVLQFGG-AS-GSLAALGSKAMPVAEALAEQLKLTLPEQ---PWHTQRDRLVEFASVLGLVA 244 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHSBCCCCC-TT-SSCGGGGGGHHHHHHHHHHHHTCBCCSS---CCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhcCCcc-hh-cCCcccCcchHHHHHHHHHHhCcCCCCc---ccccccHHHHHHHHHHHHHH
Confidence 9999999999999999999999995 76 99999998 89999999997653 48999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhcc
Q 016801 304 IHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT 380 (382)
Q Consensus 304 ~~L~kia~Dl~llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~qe 380 (382)
++|+|||+||++|++.||||+.+|. ++++||||||||+||+.+|.++++|++|+|++.+++ +++|.+||||+|+
T Consensus 245 ~~L~kia~Dl~ll~~~e~~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~---~~~~~~~erd~~~ 319 (450)
T 1re5_A 245 GSLGKFGRDISLLMQTEAGEVFEPSAPGKGGSSTMPHKRNPVGAAVLIGAATRVPGLLSTLF---AAMPQEHERSLGL 319 (450)
T ss_dssp HHHHHHHHHHHHHTSTTTCCEECCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHH---HTCCCCTTBCSST
T ss_pred HHHHHHHHHHHHHhccCcceeecccccCCCccccCCCCcCCHHHHHHHHHHHHHHHHHHHHH---HhChhhccccccc
Confidence 9999999999999999999999875 489999999999999999999999999999999887 5689999999997
No 21
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A
Probab=100.00 E-value=8.9e-69 Score=532.67 Aligned_cols=297 Identities=23% Similarity=0.217 Sum_probs=245.6
Q ss_pred cccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCccccc--
Q 016801 59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRT-- 136 (382)
Q Consensus 59 ~~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~-- 136 (382)
+.+|+.+|+. .+.... +.|..++++++.+|+|++++|+++|+||++++++|.++|+++..+.. .++.
T Consensus 8 ~~l~~~~~~~--~~m~~~-----fs~~~~i~~~~~ve~A~a~a~~~~G~i~~~~a~~I~~~~~~i~~~~~----~~~~~~ 76 (359)
T 2fel_A 8 HPFLSGLFGD--SEIIEL-----FSAKADIDAMIRFETALAQAEAEASIFADDEAEAIVSGLSEFAADMS----ALRHGV 76 (359)
T ss_dssp CTTTHHHHCC--HHHHGG-----GSHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTCCCCHH----HHHHHH
T ss_pred ccccccccCC--HHHHHH-----cCcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHhccccHH----HHHhhc
Confidence 4566655532 233333 34568999999999999999999999999999999999987542211 0111
Q ss_pred -CCcchhHHHHHHHHHHhC-CCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccc
Q 016801 137 -DREDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHL 214 (382)
Q Consensus 137 -~~~dv~~a~e~~l~e~~G-~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHl 214 (382)
..++.++++++.+.+.+| +.+++||+|+||||++||+++|++|+++..|.+.|..|+++|.++|++|+|++||||||+
T Consensus 77 ~~~~~~~~~~~~~l~~~~g~~~~~~vH~G~SsnDv~~Ta~~l~lr~~l~~l~~~L~~l~~~L~~~A~~~~~~~~~GrTHl 156 (359)
T 2fel_A 77 AKDGVVVPELIRQMRAAVAGQAADKVHFGATSQDVIDTSLMLRLKMAAEIIATRLGHLIDTLGDLASRDGHKPLTGYTRM 156 (359)
T ss_dssp HHHSSSHHHHHHHHHTTSCGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEETT
T ss_pred cccCCcHHHHHHHHHHHcCccccchhcCCCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcEeeccccC
Confidence 122344677888888998 679999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCC------CChHHHHHHcCCCCCCCCchhhccc
Q 016801 215 QRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLP------IDRFMTAEALEFTAPMRNSIDAVSD 288 (382)
Q Consensus 215 Q~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~------~~~~~la~~LG~~~~~~n~~~~~~~ 288 (382)
||||||||||+|++|+++|.||++||++++++++.+||||++ ||+.+ .+++++++.|||+.+. +|+++
T Consensus 157 Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgav--GT~~~~~~~~~~~~~~~a~~LG~~~~~----~~~~~ 230 (359)
T 2fel_A 157 QAAIGITVADRAAGWIAPLERHLLRLETFAQNGFALQFGGAA--GTLEKLGDNAGAVRADLAKRLGLADRP----QWHNQ 230 (359)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCSBCCCCCTT--SSCTTTGGGHHHHHHHHHHHHTCBCCC----CCTTC
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHh--ccCccCcchHHHHHHHHHHHhCcCCCc----hHHhc
Confidence 999999999999999999999999999999999999999853 66544 4678999999998763 68899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHc
Q 016801 289 RDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCK 368 (382)
Q Consensus 289 rD~~~e~~~~l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~ 368 (382)
||+++|++++++.++++|+|||+||++|+|.| ||+.+| +++|||||||||||+.+|.++++|++|.|+..+.+.++
T Consensus 231 RD~~~e~~~~l~~~a~~L~kia~Dirll~s~e-~Ei~~~--~~~GSS~MP~K~NP~~~E~i~~~a~~v~~~~~~~~~~~- 306 (359)
T 2fel_A 231 RDGIAEFANLLSLVTGTLGKFGQDIALMAEIG-SEIRLS--GGGGSSAMPHKQNPVNAETLVTLARFNAVQISALHQSL- 306 (359)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-TTEEEC--------------CCHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CeecCC--CCCCCccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 99999999999999999999999999999999 999986 45999999999999999999999999999999988774
Q ss_pred CCCcchhhhh
Q 016801 369 GLPLAYNRDL 378 (382)
Q Consensus 369 ~~p~~~~rD~ 378 (382)
+.+++||+
T Consensus 307 --~~~~er~~ 314 (359)
T 2fel_A 307 --VQEQERSG 314 (359)
T ss_dssp --CCCSSBCH
T ss_pred --hccCCCCC
Confidence 45666653
No 22
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=100.00 E-value=4.3e-66 Score=531.30 Aligned_cols=287 Identities=19% Similarity=0.158 Sum_probs=248.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHhhcCCcccccCCcchhHHHHHHHHHHhCCCCceec
Q 016801 84 DKALYKHDIMGSKAHASMLAKQGL--ISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLH 161 (382)
Q Consensus 84 d~~l~~a~i~v~~A~a~a~~e~Gi--I~~~~a~~I~~al~~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G~~g~~lH 161 (382)
|...++.++++++|++++++++|+ ||++++++|.++++++..+...+ +. ...+||+|..+|. +.+.+|+.++|||
T Consensus 27 ~~~~~~~~~~~e~Ala~a~~~~Gl~~i~~~~~~~I~~~l~~i~~~~~~~-~e-~~~~~DV~a~v~~-l~e~~g~~~~~iH 103 (478)
T 1yis_A 27 ETNKATLWRQLWIWLAEAEKELGLKQVTQDAIDEMKSNRDVFDWPFIRS-EE-RKLKHDVMAHNHA-FGKLCPTAAGIIH 103 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHTTTCCCHHHHHH-HH-HHSSCHHHHHHHH-HHHHCTTTGGGTT
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhCCHHHHhh-HH-HhcCCcHHHHHHH-HHHhhhhchhhee
Confidence 347899999999999999999999 99999999998876554332211 11 3458999888774 8999999999999
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Q 016801 162 TARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQ 241 (382)
Q Consensus 162 ~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~ 241 (382)
+|+||||+.+|+..|++|+++..|.+.|..|+++|.++|++|+|++||||||+||||||||||+|++|+++|.||++||.
T Consensus 104 ~G~TS~Di~~ta~~L~lr~~l~~l~~~L~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~rd~~rL~ 183 (478)
T 1yis_A 104 LGATSCFVQDNADLIAYRDSIDHILKRFATVIDRLAAFSLKNKEVVTVGRTHYQTASLVTVGKRGVLWAQELLMAFQSLS 183 (478)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecccCCccceeccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccCCcccccCCC------CCCCh-------HHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHH
Q 016801 242 DCRVRMNFCPLGACALAGTG------LPIDR-------FMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSR 308 (382)
Q Consensus 242 ~~~~~~~~~~lGggA~aGt~------~~~~~-------~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~k 308 (382)
++++++..+++|| ++ ||+ +++|+ +++++.|||+.+..|+ .|+++||+++|++++++.++++|+|
T Consensus 184 ~~~~~l~~lg~gg-~~-GT~a~~~~~f~~d~~~~~~v~~~~a~~LG~~~~~~~s-~~~~~rd~~~e~~~~l~~~a~~L~k 260 (478)
T 1yis_A 184 EFRDKMRFRGIKG-AT-GTQDSFLTLFAGDESKVEALDELVTKKANFSNRFLIT-GQTYSRQQDSQLVFSLSLLGAAAKK 260 (478)
T ss_dssp HHHHHCCBCCSCT-TT-SSCHHHHHHTTTCHHHHHHHHHHHHHHTTCSCBCSSC-SSSCCTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccc-hh-ccchhhhcccCcchhhHHHHHHHHHHHhCcCCCCCcc-ccccCChHHHHHHHHHHHHHHHHHH
Confidence 9999998877764 44 998 88888 8999999999766666 4899999999999999999999999
Q ss_pred HHHHHHHhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801 309 LGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (382)
Q Consensus 309 ia~Dl~llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~ 378 (382)
||+||++|+| +||+.+|. ++++||||||||+||+.+|.++++|++|+|++.+++...+++++.+|.+.
T Consensus 261 ia~Di~ll~s--~~el~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~er~~~~ 329 (478)
T 1yis_A 261 VCTDIRVLQA--FGELLEPFEKDQIGSSAMPYKKNPMKSERCCALSRKLINAPQEALTILADQGLERTLDD 329 (478)
T ss_dssp HHHHHHHHHH--TTSEECC-------------CCCCHHHHHHHHHHHHHHTSHHHHHHHHHTCCTTCCGGG
T ss_pred HHHHHHHHhh--hhheeccccCCCCccccCCcccCCHHHHHHHHHHHHHHHhHHHHHHHhccCCcccCcch
Confidence 9999999999 99999874 57999999999999999999999999999999999999898876555544
No 23
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=100.00 E-value=6.5e-67 Score=535.57 Aligned_cols=305 Identities=16% Similarity=0.214 Sum_probs=256.3
Q ss_pred ccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHhhcCCcc----c
Q 016801 60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQ-GLISDSDKNSILRGLDEIERQIEAGKFM----W 134 (382)
Q Consensus 60 ~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~-GiI~~~~a~~I~~al~~i~~~~~~~~f~----~ 134 (382)
.+|++||++++++... +++|.+++++++.+++||+++++++ |+||++.+++|.+ +.++..++..+.+. +
T Consensus 9 s~~~gRy~~~~~~~~~-----~~sd~~~~~~~i~ve~A~~~ala~~~gii~~~~~~~i~~-l~~~~~~~~~~d~~~i~~~ 82 (465)
T 2qga_B 9 SPIDGRYKKACGELSA-----FFSEHALIKHRIIVEVRWLLFLNEEELFFEKVTDHSVEV-LNQIATNITDSDIARVKAI 82 (465)
T ss_dssp STTTTTTHHHHGGGGG-----TSSHHHHHHHHHHHHHHHHHHHHHHTSSSCCCCHHHHHH-HHHHHHCCCHHHHHHHHHH
T ss_pred CcccccccCCcHHHHH-----HhCHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHH-HHHHHHhhccccHHHHHHH
Confidence 4699999765555433 4467899999999999999999999 9999999999874 44443332111111 1
Q ss_pred -ccCCcchhHHHHHHHHHHhC--------CCCceeccCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcC
Q 016801 135 -RTDREDVHMNIEAALTDIIG--------EPAKKLHTARSRNDQVLTDFRLWCRDAID-TIVRSIQRLQVALVKLALKNE 204 (382)
Q Consensus 135 -~~~~~dv~~a~e~~l~e~~G--------~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~-~L~~~l~~L~~~L~~~A~~~~ 204 (382)
....||+ +++|+.+.+++| +.++|||+|+||||++||+++|++|+++. .|.+.|..|+++|.++|++|+
T Consensus 83 e~~~~hDV-~a~e~~l~e~~g~~~~~~~~~~~~~iH~g~SsnDv~~Ta~~L~lr~~l~~~l~~~L~~l~~~L~~~A~~~~ 161 (465)
T 2qga_B 83 EEETNHDV-KAVEYFVKEKLKNSKREDLLKIKEYVHYLCTSEDINNVAYATCLKACLNDVVIPCLEKIMLKLKDLAVEYS 161 (465)
T ss_dssp HHHHSCHH-HHHHHHHHHHHHTSCCHHHHHHGGGTTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTT
T ss_pred hhccCCCh-HHHHHHHHHHhcccccccchhhhhhccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 2248999 999999999998 56899999999999999999999999999 799999999999999999999
Q ss_pred CccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCC------CCC------CChHHHHHH
Q 016801 205 GLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGT------GLP------IDRFMTAEA 272 (382)
Q Consensus 205 ~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt------~~~------~~~~~la~~ 272 (382)
|++||||||+||||||||||+|++|+++|.|+++||++++ .+++|+||+ || .+| +++.++++.
T Consensus 162 ~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~----~~~~~~GAv-GT~~a~~~~~p~~d~~~~~~~~~~~~ 236 (465)
T 2qga_B 162 HVPLLSRTHGQPASSTTFGKEMANFYARIHHHVGVIRRVK----VCAKFNGAV-GNFNAHKVASKDTDWVNTIGLFLKKH 236 (465)
T ss_dssp TCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHSC----CEECCCCTT-SSCHHHHHHCTTCCHHHHHHHHHHHH
T ss_pred CcEeeccccCcccccchHHHHHHHHHHHHHHHHHHHHHHH----Hhccccchh-cCccccccccCcccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999887 578888998 99 234 556667777
Q ss_pred cCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHH
Q 016801 273 LEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGK 352 (382)
Q Consensus 273 LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~ 352 (382)
|||+.+. ++ +++++||++++++++++.++++|+|||+||++|+|+++. .+.++++++|||||||||||+.+|.++++
T Consensus 237 LGl~~~~-~~-~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~~~~-~e~~~~~~~GSSiMP~K~NP~~~e~~~g~ 313 (465)
T 2qga_B 237 FNLTYSI-YC-TQIQDHDYICELCDGLARANGTLIDLCVDIWLYISNNLL-KLKVKEKEVGSSTMPHKVNPIDFENAEGN 313 (465)
T ss_dssp HCCEECC-CC-SSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSE-EEC-------CCSCTTCCCCHHHHHHHHH
T ss_pred hCCCCCC-Cc-cchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce-eeeCCCCCCCCCCCCCCCChHHHHHHHHH
Confidence 9998653 33 789999999999999999999999999999999998873 33457899999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHcCCCcchhhhhccC
Q 016801 353 SARVIGDLVTLLTLCKGLPLAYNRDLQTG 381 (382)
Q Consensus 353 a~~v~G~~~~~~~~~~~~p~~~~rD~qe~ 381 (382)
++.+.|....++..+ +|++||||+|++
T Consensus 314 ~~~~~~~~~~~~~~l--~~~~~erdl~~s 340 (465)
T 2qga_B 314 LHIANAFFKLFSSKL--PTSRLQRDLSDS 340 (465)
T ss_dssp HHHHHHHHHHHHHHT--TCCSTTBCTHHH
T ss_pred HHHHHHHHHHHHHhh--cchhhhhhhhhh
Confidence 999999998888775 688999999974
No 24
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=100.00 E-value=6.6e-66 Score=527.76 Aligned_cols=298 Identities=20% Similarity=0.211 Sum_probs=261.2
Q ss_pred ccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHc-CC--CC---HHHHHHHHHHHHHHHHHhhcCCcc
Q 016801 60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQ-GL--IS---DSDKNSILRGLDEIERQIEAGKFM 133 (382)
Q Consensus 60 ~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~-Gi--I~---~~~a~~I~~al~~i~~~~~~~~f~ 133 (382)
.+|++||++++++..+.|+ |++++++++.+|+||+++|+++ |+ || ++++++|.++|+++..+. +.
T Consensus 10 s~~~gRy~~~~~~~~~~fs-----d~~~i~~~~~ve~A~a~ala~~g~i~~ip~i~~~~a~~I~~~~~~i~~g~----~~ 80 (462)
T 2ptr_A 10 SPVDGRYGDKVSALRGIFS-----EYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAADAIGYLDAIVASFSEED----AA 80 (462)
T ss_dssp STTTTTTGGGSGGGGGTTS-----HHHHHHHHHHHHHHHHHHHHHCTTCTTSCCCCHHHHHHHHHHHHTCCHHH----HH
T ss_pred CcccccccCchHHHHHHCC-----cHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHhccCC----HH
Confidence 3699999887778788876 6799999999999999999999 66 33 899999999998774431 11
Q ss_pred -c----ccCCcchhHHHHHHHHHHhCC------CCceeccCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 016801 134 -W----RTDREDVHMNIEAALTDIIGE------PAKKLHTARSRNDQVLTDFRLWCRDAIDT-IVRSIQRLQVALVKLAL 201 (382)
Q Consensus 134 -~----~~~~~dv~~a~e~~l~e~~G~------~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~-L~~~l~~L~~~L~~~A~ 201 (382)
+ ...++|+ +++|..+.+++|+ .++|||+||||||++||+++|++|+.+.. |.+.|..|+++|.+||+
T Consensus 81 ~~~~~~~~~~~dv-~av~~~l~e~~g~~g~~~~~~~~vH~g~SsnDv~~Ta~~L~lr~~l~~~l~~~L~~L~~~L~~~A~ 159 (462)
T 2ptr_A 81 RIKTIERTTNHDV-KAVEYFLKEKVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGLKDLAV 159 (462)
T ss_dssp HHHHHHHHHSCHH-HHHHHHHHHHHTTSHHHHTTGGGTTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccccCCCH-HHHHHHHHHHhccccCCcchhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1237888 8999999999984 57899999999999999999999999994 99999999999999999
Q ss_pred hcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCC------C------CChHHH
Q 016801 202 KNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGL------P------IDRFMT 269 (382)
Q Consensus 202 ~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~------~------~~~~~l 269 (382)
+|++++||||||+||||||||||+|++|+++|.|+++||.+++ ..+.+| ||+ ||+. + ++ +.+
T Consensus 160 ~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~---~~~~~~-GAv-GT~~~~~~~~~~~~~~~v~-~~~ 233 (462)
T 2ptr_A 160 QYRDIPLLSRTAGQPATPSTIGKEMANVAYRMERQYRQLNQVE---ILGKIN-GAV-GNYNAHIAAYPEVDWHQFS-EEF 233 (462)
T ss_dssp HTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC---CEECCC-CTT-SSCHHHHHHCTTSCHHHHH-HHH
T ss_pred HccCCEeeccccCeeceechHHHHHHHHHHHHHHHHHHHHHHH---HHhccC-chh-cchhhcccccCcccHHHHH-HHH
Confidence 9999999999999999999999999999999999999999988 355665 577 8854 2 32 345
Q ss_pred HHHcCCCCCCCCchh-hccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHH
Q 016801 270 AEALEFTAPMRNSID-AVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMEL 348 (382)
Q Consensus 270 a~~LG~~~~~~n~~~-~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~ 348 (382)
++.|||. .|+++ ++++||++++++++++.++++|+|||+||++|+|+|+ ..++++++++||||||||+||+.+|.
T Consensus 234 ~~~LGl~---~n~~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~s~~~-~~E~~~~~~~GSSiMP~K~NP~~~E~ 309 (462)
T 2ptr_A 234 VTSLGIQ---WNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYIALNH-FKQKTIAGEIGSSTMPHKVNPIDFEN 309 (462)
T ss_dssp HHHTTCE---ECCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-EEECCCTTCCSCSSCTTCCCCHHHHH
T ss_pred HHHhCCC---CCchhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-hhccCCCCCCcCCCCCCCCCcHHHHH
Confidence 6669994 57889 5999999999999999999999999999999999998 55566799999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHcCCC-cchhhhhcc
Q 016801 349 VRGKSARVIGDLVTLLTLCKGLP-LAYNRDLQT 380 (382)
Q Consensus 349 i~~~a~~v~G~~~~~~~~~~~~p-~~~~rD~qe 380 (382)
++++|++|+|+..+++.+ +| .+||||+|+
T Consensus 310 i~~~a~~v~g~~~~~~~~---~~~~~~erd~~~ 339 (462)
T 2ptr_A 310 SEGNLGLSNAVLQHLASK---LPVSRWQRDLTD 339 (462)
T ss_dssp HHHHHHHHHHHHHHHHHH---TTCCSTTCCTHH
T ss_pred HHHHHHHHHHHHHHHHHh---hhhhcccccccc
Confidence 999999999999998876 66 689999986
No 25
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.4e-65 Score=523.27 Aligned_cols=303 Identities=19% Similarity=0.199 Sum_probs=252.7
Q ss_pred ccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHc-CC--C---CHHHHHHHHHHHHHHHHHhhc--CC
Q 016801 60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQ-GL--I---SDSDKNSILRGLDEIERQIEA--GK 131 (382)
Q Consensus 60 ~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~-Gi--I---~~~~a~~I~~al~~i~~~~~~--~~ 131 (382)
.+|++||++++++....|+ |++++++++.+++||++++++. |+ | +++++++|.++++++..+... .+
T Consensus 13 s~~~gRy~~~~~~~~~~fs-----d~~~~~~~l~ve~a~~~ala~~~gi~~ip~i~~~~~~~i~~~~~~~~~~d~~~~~~ 87 (459)
T 3bhg_A 13 SPIDGRYVNKTRALSPYFS-----EFALTYYRLMVEIKWFESLAANDTIPEVPALDNKARKFLSDLISNFNESEAEKIKE 87 (459)
T ss_dssp STTTTTTHHHHGGGTTTSS-----HHHHHHHHHHHHHHHHHHHHTCTTCTTSCCCCHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CcccccccCChHHHHHHcC-----HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccccHHHHHH
Confidence 4699999876666666765 6799999999999999999999 88 4 489999999988665321100 00
Q ss_pred cccccCCcchhHHHHHHHHHHhCC------CCceeccCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcC
Q 016801 132 FMWRTDREDVHMNIEAALTDIIGE------PAKKLHTARSRNDQVLTDFRLWCRDAID-TIVRSIQRLQVALVKLALKNE 204 (382)
Q Consensus 132 f~~~~~~~dv~~a~e~~l~e~~G~------~g~~lH~G~SsnDi~~Ta~~L~lr~~l~-~L~~~l~~L~~~L~~~A~~~~ 204 (382)
.+ ...+||+ +++|+.+.+++|+ .++|||+|+||||++||+++|++|+++. .|.+.|..|+++|.++|++|+
T Consensus 88 ~e-~~~~~Dv-~a~e~~l~e~~g~~~~~~~~~~~iH~g~SsnDv~~Ta~~L~lr~~l~~~l~~~L~~l~~~L~~~A~~~~ 165 (459)
T 3bhg_A 88 FE-KQTNHDV-KAVEYYLQDKFQENEQLKSCVAFIHFACTSEDINNLAYALMIKQAIAQVIQPTIAEIMGSITLLGKQHA 165 (459)
T ss_dssp HT-TTCSSHH-HHHHHHHHHHHTTSTTGGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTT
T ss_pred HH-HhcCCCh-HHHHHHHHHHhcccccCchhhhhhcCCCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 00 2348999 9999999999983 4789999999999999999999999999 699999999999999999999
Q ss_pred CccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCC------CCC------CChHHHHHH
Q 016801 205 GLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGT------GLP------IDRFMTAEA 272 (382)
Q Consensus 205 ~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt------~~~------~~~~~la~~ 272 (382)
|++||||||+||||||||||+|++|+++|.|+++||++++ .++.|+||+ || .++ +++ .+++.
T Consensus 166 ~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~----~~~~~~GAv-GT~~a~~~~~~~~~~~~~~~-~~~~~ 239 (459)
T 3bhg_A 166 DVAMLSRTHGQPATPTTMGKELVNFVARLKRPQQQLAEVL----IPAKFNGAV-GNYNAHVAAYPEVDWRKHCA-NFVTS 239 (459)
T ss_dssp TCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC----CEECCCCSS-SSCHHHHHHCTTSCHHHHHH-HHHHH
T ss_pred CCEeeccccCccceechHHHHHHHHHHHHHHHHHHHHHHH----Hhhcccccc-ccccccccccCcccHHHHHH-HHHHH
Confidence 9999999999999999999999999999999999999987 467778898 99 122 433 45555
Q ss_pred cCCCCCCCCchh-hccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHH
Q 016801 273 LEFTAPMRNSID-AVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRG 351 (382)
Q Consensus 273 LG~~~~~~n~~~-~~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~ 351 (382)
|||.. |+++ ++++||++++++++++.++++|+|||+||++|+|+++ ..++++++++|||||||||||+.+|.+++
T Consensus 240 LGl~~---~~~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~~~-~~e~~~~~~~GSSiMP~K~NP~~~e~~~g 315 (459)
T 3bhg_A 240 LGLSF---NAYTTQIEPHDGIAEVSQIMVRINNILLDYTQDIWSYISLGY-FKQKTIAEEVGSSTMPHKVNPIDFENAEG 315 (459)
T ss_dssp TTCEE---CSSCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-EEECC------CCSSCCCCCTHHHHHHHH
T ss_pred hCCCC---CccccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-eehccCCCCCCCCCCCCCcChHHHHHHHH
Confidence 99973 4566 7899999999999999999999999999999999887 33456789999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHcCCCcchhhhhccC
Q 016801 352 KSARVIGDLVTLLTLCKGLPLAYNRDLQTG 381 (382)
Q Consensus 352 ~a~~v~G~~~~~~~~~~~~p~~~~rD~qe~ 381 (382)
+++.+.|....++..+ .+++||||+|++
T Consensus 316 ~~~l~~~~~~~~~~~l--~~~~~~rdl~~s 343 (459)
T 3bhg_A 316 NLGLSNALFIHFANKL--TQSRMQRDLSDS 343 (459)
T ss_dssp HHHHHHHHHHHHHHHT--TCCSTTCCTHHH
T ss_pred HHHHHHHHHHHHHHHH--HHHHhcccchhh
Confidence 9999999988776652 357999999974
No 26
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=100.00 E-value=8.9e-65 Score=523.68 Aligned_cols=287 Identities=19% Similarity=0.181 Sum_probs=247.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhhcCCcccccCCcchhHHHHHHHHHHhCCCCceec
Q 016801 83 YDKALYKHDIMGSKAHASMLAKQGL-ISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLH 161 (382)
Q Consensus 83 ~d~~l~~a~i~v~~A~a~a~~e~Gi-I~~~~a~~I~~al~~i~~~~~~~~f~~~~~~~dv~~a~e~~l~e~~G~~g~~lH 161 (382)
.|...++.|+++++|++++++++|+ ||++++++|.++++++..+...+ +. ...+||+|..++ .+.+.+|+.++|||
T Consensus 53 S~~~~~~~~~~~e~Ala~a~~~~Gl~i~~e~~~~I~~~l~~i~~~~~~~-~e-~~~~hDV~a~v~-~l~e~~g~~~~~iH 129 (503)
T 2j91_A 53 SDRYKFRTWRQLWLWLAEAEQTLGLPITDEQIREMKSNLENIDFKMAAE-EE-KRLRHDVMAHVH-TFGHCCPKAAGIIH 129 (503)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTSSCCCHHHHHH-HH-HHHSCHHHHHHH-HHHHHCTTTGGGTT
T ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCHHHHhh-hh-hhcCCcHHHHHH-HHHHHhcccccccc
Confidence 3458999999999999999999999 99999999998765543332111 11 234899987777 58999999999999
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Q 016801 162 TARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQ 241 (382)
Q Consensus 162 ~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~a~~l~r~~~rL~ 241 (382)
+|+||||+.+|+..|++|+++..|++.|..|+++|.++|++|++++||||||+||||||||||+|++|+++|.|+++||+
T Consensus 130 ~G~TS~Di~dta~~L~lr~al~~l~~~L~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~rd~~RL~ 209 (503)
T 2j91_A 130 LGATSCYVGDNTDLIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLCMDLQNLK 209 (503)
T ss_dssp TTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcEeeccccCccceecchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccCCcccccCCC------CCCCh-------HHHHHHcCCCCCCCCchhhccchHHHHHHHHHHHHHHHHHHH
Q 016801 242 DCRVRMNFCPLGACALAGTG------LPIDR-------FMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSR 308 (382)
Q Consensus 242 ~~~~~~~~~~lGggA~aGt~------~~~~~-------~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~k 308 (382)
+++++++.+.+|| ++ ||+ +++|+ +++++.|||+.+.+|+ .|+++||++++++++++.++++|+|
T Consensus 210 ~~~~~l~~lg~gG-~~-GT~a~~~~~f~~D~~~~~~v~~~~a~~LGl~~~~~~s-~~~~~rd~~~e~~~~la~la~~L~k 286 (503)
T 2j91_A 210 RVRDDLRFRGVKG-TT-GTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIIT-GQTYTRKVDIEVLSVLASLGASVHK 286 (503)
T ss_dssp HHHHHCCBCCSCC-TT-SSCHHHHHHTTTCHHHHHHHHHHHHHHTTCSCBCSCC-SSSCCTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccccccc-cc-cchhhhccccCCchHHHHHHHHHHHHHhCCCCCCCcc-cccccChHHHHHHHHHHHHHHHHHH
Confidence 9999998877754 44 998 78887 8899999999766665 4899999999999999999999999
Q ss_pred HHHHHHHhcccccceeecCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhh
Q 016801 309 LGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRD 377 (382)
Q Consensus 309 ia~Dl~llss~e~gev~l~~-~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD 377 (382)
||+||++|+| +||+.+|. ++++||||||||+||+.+|.++++|++|+|++.+++...+++++.+|.+
T Consensus 287 ia~Dirll~s--~~ei~ep~~~~q~GSSiMP~K~NPv~~E~i~~~a~~v~g~~~~~~~~~~~~~~erd~~ 354 (503)
T 2j91_A 287 ICTDIRLLAN--LKEMEEPFEKQQIGSSAMPYKRNPMRSERCCSLARHLMTLVMDPLQTASVQWFERTLD 354 (503)
T ss_dssp HHHHHHHHHH--HTSEECCC-----------CCCCCHHHHHHHHHHHHHHHTTHHHHHHHHTCCTTCCGG
T ss_pred HHHHHHHHhc--cceeeccccCCCCCCCCCccccCcHHHHHHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence 9999999999 99999874 5789999999999999999999999999999999998888876544443
No 27
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=21.69 E-value=1.4e+02 Score=20.94 Aligned_cols=20 Identities=30% Similarity=0.556 Sum_probs=16.7
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 016801 107 LISDSDKNSILRGLDEIERQ 126 (382)
Q Consensus 107 iI~~~~a~~I~~al~~i~~~ 126 (382)
-++++.+++|.+++++.++.
T Consensus 4 ~lt~eq~~aILkaLdeaIe~ 23 (57)
T 3fxd_A 4 QLSDEQKETILKALNDAIEK 23 (57)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHc
Confidence 36889999999999997754
Done!