Query 016803
Match_columns 382
No_of_seqs 207 out of 1158
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 04:02:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016803.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016803hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kf6d_ f.21.2.2 (D:) Fumarate 10.0 34 0.0025 26.9 0.5 41 156-205 49-89 (119)
2 d1k8ua_ a.39.1.2 (A:) Calcycli 4.5 72 0.0052 22.9 -0.3 17 198-214 13-29 (89)
3 d1xk4c1 a.39.1.2 (C:4-86) Calc 3.8 90 0.0066 22.4 -0.2 19 198-216 14-32 (83)
4 d3cr5x1 a.39.1.2 (X:0-89) Calc 3.7 92 0.0067 22.6 -0.3 19 198-216 13-31 (90)
5 d1ksoa_ a.39.1.2 (A:) Calcycli 3.1 1.2E+02 0.0085 21.8 -0.2 17 198-214 13-29 (93)
6 d2epra1 g.37.1.1 (A:350-384) P 3.1 2.3E+02 0.016 17.2 1.2 17 196-212 19-35 (35)
7 d1j55a_ a.39.1.2 (A:) Calcycli 2.9 1.3E+02 0.0097 21.9 -0.1 54 198-254 13-73 (94)
8 d1qlsa_ a.39.1.2 (A:) Calcycli 2.6 1.5E+02 0.011 21.6 -0.1 19 198-216 13-31 (95)
9 d1oxja1 a.60.1.2 (A:594-655) R 2.5 1.9E+02 0.014 19.1 0.5 12 149-162 40-51 (62)
10 d1dsqa_ g.40.1.1 (A:) Nucleic 2.4 2.2E+02 0.016 16.1 0.5 13 48-60 11-23 (26)
No 1
>d1kf6d_ f.21.2.2 (D:) Fumarate reductase subunit FrdD {Escherichia coli [TaxId: 562]}
Probab=10.02 E-value=34 Score=26.91 Aligned_cols=41 Identities=29% Similarity=0.409 Sum_probs=26.4
Q ss_pred chhhhhhcCCCCCCCChHHHHHHHHHhHhhccCchhhhhhhhhhhccCCC
Q 016803 156 TLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCD 205 (382)
Q Consensus 156 T~G~HRl~sHRSfka~~~l~~~L~~~gtlA~Qgs~~~Wv~~HR~HHk~sD 205 (382)
...|+|.. +|-.+..-+.++..+-.+. -|...||.||---|
T Consensus 49 a~~y~~i~---aFa~s~iG~l~ll~~i~lp------lWh~~HRihHglHD 89 (119)
T d1kf6d_ 49 ALSYERVL---AFAQSFIGRVFLFLMIVLP------LWCGLHRMHHAMHD 89 (119)
T ss_dssp TTSHHHHH---HHHTSHHHHHHHHHHHHHH------HHHHHHHHHHHHHH
T ss_pred ccCHHHHH---HHHhhHHHHHHHHHHHHHH------HHHHHHHHHHHHhh
Confidence 36788884 3555666666654433332 39999999986555
No 2
>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}
Probab=4.47 E-value=72 Score=22.93 Aligned_cols=17 Identities=24% Similarity=0.419 Sum_probs=13.6
Q ss_pred hhhccCCCCCCCCCCCC
Q 016803 198 RYHHQFCDSERDPHSPI 214 (382)
Q Consensus 198 R~HHk~sDTd~DPHsp~ 214 (382)
..-|+|+|+|+|..+-.
T Consensus 13 ~vF~kya~~dg~~~~ls 29 (89)
T d1k8ua_ 13 AIFHKYSGREGDKHTLS 29 (89)
T ss_dssp HHHHHHHTSSSCTTEEE
T ss_pred HHHHHHcccCCCCCeec
Confidence 45689999999998654
No 3
>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}
Probab=3.78 E-value=90 Score=22.38 Aligned_cols=19 Identities=21% Similarity=0.329 Sum_probs=15.4
Q ss_pred hhhccCCCCCCCCCCCCCc
Q 016803 198 RYHHQFCDSERDPHSPIEG 216 (382)
Q Consensus 198 R~HHk~sDTd~DPHsp~rG 216 (382)
..-|+|+.+++|++.=.++
T Consensus 14 ~vFhkYa~~~G~~~tLsk~ 32 (83)
T d1xk4c1 14 NTFHQYSVKLGHPDTLNQG 32 (83)
T ss_dssp HHHHHHHTTSSSTTSBCHH
T ss_pred HHHHHHhCcCCCcccCCHH
Confidence 3569999999999997743
No 4
>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}
Probab=3.70 E-value=92 Score=22.61 Aligned_cols=19 Identities=26% Similarity=0.392 Sum_probs=15.1
Q ss_pred hhhccCCCCCCCCCCCCCc
Q 016803 198 RYHHQFCDSERDPHSPIEG 216 (382)
Q Consensus 198 R~HHk~sDTd~DPHsp~rG 216 (382)
+.-|+|+++++|++.-.++
T Consensus 13 ~vFhkYa~~~G~~~tLsk~ 31 (90)
T d3cr5x1 13 DVFHQYSGREGDKHKLKKS 31 (90)
T ss_dssp HHHHHHHTSSSSTTSBCHH
T ss_pred HHHHHHhccCCCcCcCCHH
Confidence 4569999999999886643
No 5
>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}
Probab=3.14 E-value=1.2e+02 Score=21.85 Aligned_cols=17 Identities=6% Similarity=-0.021 Sum_probs=13.7
Q ss_pred hhhccCCCCCCCCCCCC
Q 016803 198 RYHHQFCDSERDPHSPI 214 (382)
Q Consensus 198 R~HHk~sDTd~DPHsp~ 214 (382)
..-|+|+|+|+|.+.-.
T Consensus 13 ~vF~kya~~dGd~~~ls 29 (93)
T d1ksoa_ 13 CTFQEYAGRCGDKYKLC 29 (93)
T ss_dssp HHHHHHHTSSSCTTCEE
T ss_pred HHHHHHcCcCCCCCeEC
Confidence 45689999999998655
No 6
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.08 E-value=2.3e+02 Score=17.18 Aligned_cols=17 Identities=29% Similarity=0.413 Sum_probs=13.3
Q ss_pred hhhhhccCCCCCCCCCC
Q 016803 196 THRYHHQFCDSERDPHS 212 (382)
Q Consensus 196 ~HR~HHk~sDTd~DPHs 212 (382)
-|..-|+.|-++.-|++
T Consensus 19 yhlnrhklshs~ekpys 35 (35)
T d2epra1 19 YHLNRHKLSHSGEKPYS 35 (35)
T ss_dssp HHHHHHGGGSCSCCCCC
T ss_pred HHHHhhhcccCCCCCCC
Confidence 37777888888888875
No 7
>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}
Probab=2.90 E-value=1.3e+02 Score=21.87 Aligned_cols=54 Identities=9% Similarity=0.105 Sum_probs=29.2
Q ss_pred hhhccCCCCCCCCCCCCCch----hhhhhhcccccc---hhhhhhCCCCCCCccCCCceeeeeh
Q 016803 198 RYHHQFCDSERDPHSPIEGF----WFSHMSWLFDKD---SVLERCGGPNNVGDLEKQPFYRFLR 254 (382)
Q Consensus 198 R~HHk~sDTd~DPHsp~rGF----~~sH~GWll~~~---~~~~~~g~~~d~~DL~~Dp~v~fq~ 254 (382)
..-|+|+.+++|+..-.++= .-.-++=.+... ..+.+. ...-|.-.|--+-|++
T Consensus 13 ~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~---m~~LD~n~Dg~vdF~E 73 (94)
T d1j55a_ 13 DVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKL---LKDLDANGDAQVDFSE 73 (94)
T ss_dssp HHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHH---HHHHCSSSSSSEEHHH
T ss_pred HHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHH---HHHhcCCCCCcCCHHH
Confidence 35699999999998765332 222222223221 112211 1123667888999976
No 8
>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}
Probab=2.59 E-value=1.5e+02 Score=21.64 Aligned_cols=19 Identities=0% Similarity=0.004 Sum_probs=15.0
Q ss_pred hhhccCCCCCCCCCCCCCc
Q 016803 198 RYHHQFCDSERDPHSPIEG 216 (382)
Q Consensus 198 R~HHk~sDTd~DPHsp~rG 216 (382)
+.-|+|+.+++|+..-.++
T Consensus 13 ~vFhkYa~~~G~~~tLsk~ 31 (95)
T d1qlsa_ 13 AIFQKHAGRDGNNTKISKT 31 (95)
T ss_dssp HHHHHHHTTSSCTTCBCHH
T ss_pred HHHHHHhCcCCCcCcCCHH
Confidence 4569999999999876643
No 9
>d1oxja1 a.60.1.2 (A:594-655) RNA-binding protein Smaug {Drosophila melanogaster [TaxId: 7227]}
Probab=2.54 E-value=1.9e+02 Score=19.13 Aligned_cols=12 Identities=17% Similarity=0.410 Sum_probs=8.3
Q ss_pred HHhhhhcchhhhhh
Q 016803 149 VTGLLGITLSFHRN 162 (382)
Q Consensus 149 ltg~lGIT~G~HRl 162 (382)
+.- +||+.| ||-
T Consensus 40 L~~-lGI~~G-hRk 51 (62)
T d1oxja1 40 LQS-VGVTKG-ASH 51 (62)
T ss_dssp HHH-TTCCHH-HHH
T ss_pred HHH-cCCCHH-HHH
Confidence 345 888886 775
No 10
>d1dsqa_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]}
Probab=2.43 E-value=2.2e+02 Score=16.08 Aligned_cols=13 Identities=23% Similarity=0.220 Sum_probs=8.7
Q ss_pred eehhhccccCchh
Q 016803 48 VYHVYKYNKRESL 60 (382)
Q Consensus 48 ~~~~~~~~~~~~~ 60 (382)
+-|.++.||.|..
T Consensus 11 tghikkdck~e~~ 23 (26)
T d1dsqa_ 11 TGHIKRDCKEEXX 23 (26)
T ss_dssp BSSCTTTTTCC--
T ss_pred cccchhhhhhhhc
Confidence 3588888988763
Done!