Query 016808
Match_columns 382
No_of_seqs 140 out of 1270
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 04:08:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016808.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016808hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfd_A Acyl-COA dehydrogenase; 100.0 1.1E-68 3.8E-73 512.3 34.8 363 6-380 29-393 (393)
2 2d29_A Acyl-COA dehydrogenase; 100.0 8.2E-68 2.8E-72 505.4 40.6 349 33-381 33-386 (387)
3 1ukw_A Acyl-COA dehydrogenase; 100.0 5.2E-68 1.8E-72 505.5 37.9 347 33-380 31-378 (379)
4 3r7k_A Probable acyl COA dehyd 100.0 1.1E-67 3.8E-72 506.8 38.7 345 33-378 55-401 (403)
5 2vig_A Short-chain specific ac 100.0 1.5E-67 5.1E-72 504.1 39.2 349 33-381 32-381 (391)
6 2dvl_A Acyl-COA dehydrogenase; 100.0 2.6E-67 8.9E-72 499.4 39.7 343 33-380 29-372 (372)
7 2jif_A Short/branched chain sp 100.0 1.8E-67 6.1E-72 505.1 38.7 348 33-381 55-403 (404)
8 3p4t_A Putative acyl-COA dehyd 100.0 2.3E-67 7.8E-72 504.6 39.2 345 33-378 52-399 (403)
9 3nf4_A Acyl-COA dehydrogenase; 100.0 1.2E-67 4.1E-72 504.4 37.0 345 33-380 42-387 (387)
10 1egd_A Medium chain acyl-COA d 100.0 3.2E-67 1.1E-71 502.7 39.5 348 33-381 42-393 (396)
11 1buc_A Butyryl-COA dehydrogena 100.0 1.9E-67 6.6E-72 502.4 37.4 348 33-380 31-383 (383)
12 1r2j_A Protein FKBI; polyketid 100.0 1.3E-67 4.6E-72 500.1 34.0 358 6-380 3-363 (366)
13 2pg0_A Acyl-COA dehydrogenase; 100.0 8E-67 2.8E-71 498.2 39.4 344 33-378 36-383 (385)
14 1ivh_A Isovaleryl-COA dehydrog 100.0 9.1E-67 3.1E-71 499.2 37.6 348 34-381 40-392 (394)
15 1rx0_A Acyl-COA dehydrogenase 100.0 1.8E-66 6.1E-71 496.8 39.3 363 6-381 29-393 (393)
16 3ii9_A Glutaryl-COA dehydrogen 100.0 1.7E-67 5.9E-72 504.5 30.1 346 33-380 45-391 (396)
17 3swo_A Glutaryl-COA dehydrogen 100.0 4.3E-66 1.5E-70 495.3 37.5 342 33-381 52-394 (399)
18 2eba_A Putative glutaryl-COA d 100.0 6.3E-66 2.1E-70 492.1 38.3 343 33-380 37-381 (385)
19 3sf6_A Glutaryl-COA dehydrogen 100.0 8.9E-66 3E-70 493.6 37.1 341 33-380 56-398 (403)
20 2ix5_A Acyl-coenzyme A oxidase 100.0 1.7E-65 6E-70 494.9 38.2 342 34-380 82-424 (436)
21 4hr3_A Putative acyl-COA dehyd 100.0 1.2E-65 4.3E-70 494.8 36.8 344 38-381 58-411 (415)
22 3mpi_A Glutaryl-COA dehydrogen 100.0 1.2E-65 4.3E-70 492.1 31.7 344 33-378 31-382 (397)
23 3owa_A Acyl-COA dehydrogenase; 100.0 1.3E-64 4.4E-69 504.1 37.2 339 38-381 65-425 (597)
24 1siq_A GCD, glutaryl-COA dehyd 100.0 8.5E-64 2.9E-68 478.5 36.8 342 33-380 40-384 (392)
25 2z1q_A Acyl-COA dehydrogenase; 100.0 1.7E-63 5.7E-68 496.4 35.8 340 37-381 59-415 (577)
26 2uxw_A VERY-long-chain specifi 100.0 2.4E-62 8.1E-67 489.2 35.2 345 34-378 75-428 (607)
27 3mkh_A Nitroalkane oxidase; ox 100.0 2.7E-62 9.2E-67 474.7 32.5 340 40-381 48-417 (438)
28 2c12_A Nitroalkane oxidase; ox 100.0 1.5E-61 5.1E-66 469.4 36.2 340 40-380 46-419 (439)
29 2wbi_A Acyl-COA dehydrogenase 100.0 1E-61 3.5E-66 468.7 32.1 340 39-381 68-419 (428)
30 3mxl_A Nitrososynthase; flavin 100.0 8.1E-60 2.8E-64 451.8 26.0 338 33-380 34-393 (395)
31 2rfq_A 3-HSA hydroxylase, oxyg 100.0 4.5E-59 1.5E-63 446.4 28.9 332 33-380 30-386 (394)
32 2or0_A Hydroxylase; APC7385, r 100.0 4.7E-59 1.6E-63 448.8 26.8 332 33-380 43-401 (414)
33 2jbr_A P-hydroxyphenylacetate 100.0 6.5E-59 2.2E-63 448.7 27.4 332 33-380 58-414 (422)
34 3m9v_A FAD-dependent oxidoredu 100.0 7.2E-58 2.5E-62 443.7 30.5 339 33-381 45-405 (439)
35 3djl_A Protein AIDB; alpha hel 100.0 3.1E-52 1.1E-56 410.1 33.6 327 40-381 89-442 (541)
36 1w07_A Acyl-COA oxidase; oxido 100.0 1.6E-51 5.6E-56 415.0 29.7 335 37-380 56-440 (659)
37 2ddh_A Acyl-COA oxidase; beta 100.0 1.3E-48 4.5E-53 393.2 30.0 318 58-380 75-437 (661)
38 1u8v_A Gamma-aminobutyrate met 100.0 1.6E-38 5.3E-43 309.2 28.2 253 97-357 118-404 (490)
39 2yyk_A 4-hydroxyphenylacetate- 100.0 7.5E-38 2.6E-42 304.0 29.8 265 104-378 122-422 (481)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 4.3E-33 1.5E-37 270.2 25.1 238 102-347 127-392 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 100.0 2.9E-28 9.8E-33 236.8 25.1 244 106-356 134-400 (517)
42 3owa_A Acyl-COA dehydrogenase; 94.7 0.28 9.7E-06 48.5 12.4 120 257-380 469-591 (597)
43 2z1q_A Acyl-COA dehydrogenase; 81.3 35 0.0012 33.2 14.9 101 273-381 469-570 (577)
44 2uxw_A VERY-long-chain specifi 79.5 25 0.00085 34.6 13.1 70 272-341 506-576 (607)
No 1
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=1.1e-68 Score=512.27 Aligned_cols=363 Identities=34% Similarity=0.551 Sum_probs=336.8
Q ss_pred cHHHHhHHhhhhhhcccccccccccccccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCch
Q 016808 6 GARSLCASFFTKKQKHSAAFSSTSLLFDDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSV 84 (382)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~ 84 (382)
.+++++++.+.+.... .|+.+.+| ++|+.|++.||+++.+|++|||.|+++.+.+.++|++++.|+++
T Consensus 29 ~~r~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~ 97 (393)
T 3pfd_A 29 AIRALAEKEIAPYAAE-----------VDEKARFPEEALAALNSSGFSAIHVPEEYGGQGADSVATCIVIEEVARVDCSA 97 (393)
T ss_dssp HHHHHHHHHTGGGHHH-----------HHHTTCCCHHHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhCchHHHH-----------HhhhCCCCHHHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHHHHHHHhhCchH
Confidence 4455555555443322 45667788 99999999999999999999999999999999999999999999
Q ss_pred hhHHhhhhhHHHHHHHhcCCHHHHHhhhhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCC
Q 016808 85 GLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVA 164 (382)
Q Consensus 85 a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a 164 (382)
++++..|. .+...+..+|+++|+++|++++.+|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+.+|
T Consensus 98 ~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~A 176 (393)
T 3pfd_A 98 SLIPAVNK-LGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVADGDDWILNGSKCWITNGGKS 176 (393)
T ss_dssp HHHHHHHH-HTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTC
T ss_pred HHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEcCCEEEEeeEEEEecCCccc
Confidence 99777776 77778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHH
Q 016808 165 QTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLER 244 (382)
Q Consensus 165 ~~~lv~a~~~~~~~~~~~~~flVp~~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~ 244 (382)
||++|+++++++++.+++++|+||++.|||++.++|+++|++++++++|+||||+||++++||.++.|+......+...|
T Consensus 177 d~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~~~~l~~~r 256 (393)
T 3pfd_A 177 TWYTVMAVTDPDKGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTR 256 (393)
T ss_dssp SEEEEEEESCGGGGGGGEEEEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHTTH
T ss_pred CEEEEEEEeCCCCCCCceEEEEEECCCCCeEecCCCCcccCCCCCceEEEEccEEEcHHHcCCCCCchHHHHHHHHHHHH
Confidence 99999999876545568999999999999999999999999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-ChhhhhHHHHH
Q 016808 245 LVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKV-DPKDCAGVILC 323 (382)
Q Consensus 245 ~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~ak~~ 323 (382)
+.+++.++|+++++++.+++|+++|.+||+|+.++|.+|++|++|.+++++++++++++++.++.+.+ ....++++|++
T Consensus 257 ~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~ 336 (393)
T 3pfd_A 257 PTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERGEGDLGFISAASKCF 336 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988765 66788999999
Q ss_pred HHHHHHHHHHHHHHhhcCceecccchHHHHHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 324 AAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 324 ~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
+++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|++.+++
T Consensus 337 a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~ll~ 393 (393)
T 3pfd_A 337 ASDVAMEVTTDAVQLFGGYGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSRALLR 393 (393)
T ss_dssp HHHHHHHHHHHHHHHTGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhchhhccCCChHHHHHHhhcceeeecCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999875
No 2
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=8.2e-68 Score=505.42 Aligned_cols=349 Identities=39% Similarity=0.618 Sum_probs=331.4
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+.+.+| +.|+.|++.||+++.+|++|||.|+++.+.+.++|+++++|+++++.+..|..++...+..+|+++|+++|
T Consensus 33 ~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~ 112 (387)
T 2d29_A 33 RDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYYDGALALTVASHNSLATGHILLAGSEAQKEAF 112 (387)
T ss_dssp HHHHCCCCHHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHH
T ss_pred HhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 45567788 99999999999999999999999999999999999999999999988877754677889999999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCC----CCCCeEEEEE
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKA----GSKGITAFII 187 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~----~~~~~~~flV 187 (382)
++++.+|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+..|||++|+++++++. +.+++++|+|
T Consensus 113 l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~~~~~g~~~flV 192 (387)
T 2d29_A 113 LPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVVMARTDPPPSPERKHQGISAFAF 192 (387)
T ss_dssp HHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECSCCSCGGGTTTTEEEEEE
T ss_pred HHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEeCCEEEEEeEEeccCCCCcCCEEEEEEEeCCccccCCCCCCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999987442 4557899999
Q ss_pred eCCCCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016808 188 EKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVR 267 (382)
Q Consensus 188 p~~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~ 267 (382)
|++.|||++.++|+++|++++++++|+||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|++
T Consensus 193 ~~~~pGv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~ 272 (387)
T 2d29_A 193 FRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAK 272 (387)
T ss_dssp ECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCeeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888888999999999999999999999999999
Q ss_pred hhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceeccc
Q 016808 268 QREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNE 347 (382)
Q Consensus 268 ~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~ 347 (382)
+|.+||+|+.++|.+|++|++|.+++++++++++++++.++.+.+....++++|+++++.+.++++.++|++||.||+++
T Consensus 273 ~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~ 352 (387)
T 2d29_A 273 GREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLEAAQAKLFASEAAVKACDEAIQILGGYGYVKD 352 (387)
T ss_dssp HCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTT
T ss_pred hCccCCcchHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCC
Confidence 99999999999999999999999999999999999999999877677889999999999999999999999999999999
Q ss_pred chHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 016808 348 YATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 348 ~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
+|++|+|||++...+++|++++++..+++.++++
T Consensus 353 ~~~~r~~Rda~~~~i~~G~~~i~~~~ia~~~l~~ 386 (387)
T 2d29_A 353 YPVERYWRDARLTRIGEGTSEILKLVIARRLLEA 386 (387)
T ss_dssp SSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHhhCccccCCHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999875
No 3
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=5.2e-68 Score=505.46 Aligned_cols=347 Identities=37% Similarity=0.576 Sum_probs=330.3
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+.+.+| +.|+.|.+.||+++.+|++|||.|+++.+.+.++|+++++|+++++.+..|. .+...+..+|+++|+++|
T Consensus 31 ~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~ 109 (379)
T 1ukw_A 31 YDEKEEVPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAYACMGIYTIPMASD-LGITPVLLAGTEEQKERF 109 (379)
T ss_dssp HHHHTCCCHHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHHCCHHHHHHH
T ss_pred HhhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHH
Confidence 45567788 9999999999999999999999999999999999999999999998888775 788899999999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCCC
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGM 191 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~~ 191 (382)
++++.+|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+..|||++|+++++++++.+++++|+||++.
T Consensus 110 l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~ 189 (379)
T 1ukw_A 110 LRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAEWVVVFATVNPELRHKGVVALVVERGT 189 (379)
T ss_dssp HGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTEEEEEEEEESCGGGGGGGEEEEEEETTC
T ss_pred HHHHhCCCceEEEEecCCCCCcChhhCeEEEEEeCCEEEEEEEEecccCCCcCCEEEEEEEcCCCCCCCceEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998644344578999999999
Q ss_pred CCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 016808 192 PGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQ 271 (382)
Q Consensus 192 ~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~ 271 (382)
|||++.++|+++|++++++++|+||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++|.+
T Consensus 190 ~Gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~ 269 (379)
T 1ukw_A 190 PGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEARKYAKEREA 269 (379)
T ss_dssp TTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBS
T ss_pred CCeEecCccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCee
Confidence 99999999999999999999999999999999999999999988888889999999999999999999999999999999
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchHH
Q 016808 272 FGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATG 351 (382)
Q Consensus 272 ~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~ 351 (382)
||+|+.++|.+|++|++|.+++++++++++.+++.++.+.+....++++|+++++.+.++++.++|++||.||++++|++
T Consensus 270 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~ 349 (379)
T 1ukw_A 270 FGEPIANFQAIQFKLVDMLIGIETARMYTYYAAWLADQGLPHAHASAIAKAYASEIAFEAANQAIQIHGGYGYVREFPVE 349 (379)
T ss_dssp SSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHH
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhCCeecCCCChHH
Confidence 99999999999999999999999999999999999988777778899999999999999999999999999999999999
Q ss_pred HHHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 352 RLLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 352 r~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
|+|||++...+++|++++++..+++.+++
T Consensus 350 r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 378 (379)
T 1ukw_A 350 KLLRDVKLNQIYEGTNEIQRLIIARHILA 378 (379)
T ss_dssp HHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHhcCceecCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999875
No 4
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=1.1e-67 Score=506.76 Aligned_cols=345 Identities=30% Similarity=0.455 Sum_probs=330.4
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhc-cCchhhHHhhhhhHHHHHHHhcCCHHHHHh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRA-SGSVGLSYGAHSNLCINQLVRHGSPAQKDK 110 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~-~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~ 110 (382)
.|+.+.+| +.|+.|.+.||+++.+|++|||.|+++.+.+.++|++++. |+++++.+..+...+...+..+|+++|+++
T Consensus 55 ~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~ 134 (403)
T 3r7k_A 55 WEHVGEIPRDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIER 134 (403)
T ss_dssp HHHHTSCCTHHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHHHHHHTTCCHHHHHHHCTHHHHSHHHHHHCCHHHHHH
T ss_pred HHhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHhcCCchHHHHHHHHhhHHHHHHHHhCCHHHHHH
Confidence 45677888 9999999999999999999999999999999999999998 999988877555578889999999999999
Q ss_pred hhhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCC
Q 016808 111 YLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKG 190 (382)
Q Consensus 111 ~l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~ 190 (382)
|++++.+|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+..||+++|+++++++ +.+++++|+||++
T Consensus 135 ~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~-~~~g~~~flV~~~ 213 (403)
T 3r7k_A 135 YVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITSGVRADFVTTAVRTGGP-GYGGVSLLVIDKN 213 (403)
T ss_dssp HHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEECSSS-SGGGEEEEEEETT
T ss_pred HHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEECCEEEEEEEEEcccCCccCCEEEEEEEcCCC-CCCceEEEEEeCC
Confidence 999999999999999999999999999999999999999999999999999999999999999765 5568999999999
Q ss_pred CCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 016808 191 MPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQRE 270 (382)
Q Consensus 191 ~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~ 270 (382)
.|||++.++|+++|++++++++|+||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++|.
T Consensus 214 ~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~ 293 (403)
T 3r7k_A 214 SPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERE 293 (403)
T ss_dssp CTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred CCCeEecCcccccCCCCCCceEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchH
Q 016808 271 QFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYAT 350 (382)
Q Consensus 271 ~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l 350 (382)
+||+|+.++|.+|++|++|.+++++++++++++++.++.+.+...+++++|+++++.+.++++.++|++||.||++++++
T Consensus 294 ~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~G~~~~~~~ 373 (403)
T 3r7k_A 294 TFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEI 373 (403)
T ss_dssp ETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHH
T ss_pred cCCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEecCCchH
Confidence 99999999999999999999999999999999999999888788889999999999999999999999999999999999
Q ss_pred HHHHHhhccCcccCChHHHHHHHHHHHH
Q 016808 351 GRLLRDAKLYEIGAGTSEIRRMIIGRAL 378 (382)
Q Consensus 351 ~r~~rda~~~~~~~g~~~~~~~~l~~~l 378 (382)
+|+|||++.+.+++|++++++..+++.+
T Consensus 374 ~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 401 (403)
T 3r7k_A 374 ERHYRDCRILGIGGGTNEIMNEVIAKRI 401 (403)
T ss_dssp HHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred HHHHHHhCcceeecCHHHHHHHHHHHHh
Confidence 9999999999999999999999999976
No 5
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=1.5e-67 Score=504.14 Aligned_cols=349 Identities=40% Similarity=0.612 Sum_probs=331.3
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+.+.+| +.|+.|++.||+++.+|++|||.|+++.+.+.++|+++++|+++++.+..|...+...+..+|+++|+++|
T Consensus 32 ~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~ 111 (391)
T 2vig_A 32 VDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAW 111 (391)
T ss_dssp HHHHTCCCHHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHCCHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 45567788 99999999999999999999999999999999999999999999988887743677889999999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCCC
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGM 191 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~~ 191 (382)
++++.+|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+..||+++|+++++++++.+++++|+||++.
T Consensus 112 l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~ 191 (391)
T 2vig_A 112 VTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKSISAFLVPMPT 191 (391)
T ss_dssp TGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECCSSSTTSCEEEEEEESSC
T ss_pred HHHHhCCCceEEEEecCCCCCCCcccceeEEEEeCCEEEEeeEEEeecCCCcCCEEEEEEEeCCCCCCCceEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998654345578999999999
Q ss_pred CCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 016808 192 PGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQ 271 (382)
Q Consensus 192 ~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~ 271 (382)
|||++.++|+++|++++++++|+||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++|.+
T Consensus 192 pGv~v~~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~ 271 (391)
T 2vig_A 192 PGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMA 271 (391)
T ss_dssp TTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred CCeEecCccccccCCCCCeeEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 99999999999999999999999999999999999999999988888889999999999999999999999999999999
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchHH
Q 016808 272 FGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATG 351 (382)
Q Consensus 272 ~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~ 351 (382)
||+|+.++|.+|++|++|.+++++++++++.+++.++.+.+...+++++|+++++.+.++++.++|++||.||++++|++
T Consensus 272 fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~ 351 (391)
T 2vig_A 272 FGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKDNKKPFIKEAAMAKLAASEAATAISHQAIQILGGMGYVTEMPAE 351 (391)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHH
T ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCCeEecCCChHH
Confidence 99999999999999999999999999999999999998776678899999999999999999999999999999999999
Q ss_pred HHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 016808 352 RLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 352 r~~rda~~~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
|+|||++...+++|++++++..+++.++++
T Consensus 352 r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~ 381 (391)
T 2vig_A 352 RHYRDARITEIYEGTSEIQRLVIAGHLLRS 381 (391)
T ss_dssp HHHHHHHHHTTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcceeecCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999998863
No 6
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=2.6e-67 Score=499.40 Aligned_cols=343 Identities=40% Similarity=0.647 Sum_probs=328.2
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+.+.+| +.|+.|.+.||+++.+|++|||.|+++.+.+.++|+++++|+++++.+..|...+...+..+|+++|+++|
T Consensus 29 ~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~ 108 (372)
T 2dvl_A 29 YDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRY 108 (372)
T ss_dssp HHHTTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTSHHHHHHHHHCCHHHHHHT
T ss_pred HHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHhhhHHHHHHHHhCCHHHHHHH
Confidence 45567788 99999999999999999999999999999999999999999999988888744677889999999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCCC
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGM 191 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~~ 191 (382)
++++.+|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+..||+++|++++++ ++.+|+||++.
T Consensus 109 l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~-----g~~~flV~~~~ 183 (372)
T 2dvl_A 109 LVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHAHLYVVMARTEK-----GISAFLVEKGT 183 (372)
T ss_dssp HHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEETT-----EEEEEEEETTC
T ss_pred HHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecCCCcCCEEEEEEEeCC-----CcEEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999863 68999999999
Q ss_pred CCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 016808 192 PGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQ 271 (382)
Q Consensus 192 ~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~ 271 (382)
|||++.+.|+++|++++++++|+||||+||+++++|.++.|+......+...|+.+++.++|+++++++.+++|+++|.+
T Consensus 184 pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~ 263 (372)
T 2dvl_A 184 PGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEEREQ 263 (372)
T ss_dssp TTEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred CCeEecCcccccccCcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999999999999999988888899999999999999999999999999999999
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchHH
Q 016808 272 FGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATG 351 (382)
Q Consensus 272 ~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~ 351 (382)
||+|+.++|.+|++|++|.+++++++++++.+++.++.+.+....++++|+++++.+.++++.++|++||.||++++|++
T Consensus 264 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~ 343 (372)
T 2dvl_A 264 FGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLFASAAAVEVTREAVQVLGGYGYHRDYRVE 343 (372)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGGGSHH
T ss_pred cCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcCeecCCCCcHH
Confidence 99999999999999999999999999999999999998877778899999999999999999999999999999999999
Q ss_pred HHHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 352 RLLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 352 r~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
|+|||++...+++|++++++..+++.+++
T Consensus 344 r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 372 (372)
T 2dvl_A 344 RYYRDAKVTEIYEGTSEIQRLVIARELYR 372 (372)
T ss_dssp HHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHhhcceecCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999874
No 7
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=1.8e-67 Score=505.07 Aligned_cols=348 Identities=34% Similarity=0.570 Sum_probs=329.2
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+.+.+| +.|++|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+..|...+..++..+|+++|+++|
T Consensus 55 ~d~~~~~~~~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~ 134 (404)
T 2jif_A 55 MDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATY 134 (404)
T ss_dssp HHHHTCCCHHHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHH
T ss_pred HhhcCCCCHHHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 45567788 99999999999999999999999999999999999999999999988887765667889999999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCCC
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGM 191 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~~ 191 (382)
+|++.+|. ++++++|||+.|||...+.|+|++++|||+|||+|.|+||+..||+++|+++++++++.+++++|+||++.
T Consensus 135 l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~is~a~~Ad~~~v~ar~~~~~~~~g~~~flV~~~~ 213 (404)
T 2jif_A 135 LPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDT 213 (404)
T ss_dssp HHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESCGGGGGGGEEEEEEETTC
T ss_pred HHHHhCCC-cceEEecCCCCCCChhhceeEEEEeCCEEEEEeEEEeecCCcccCEEEEEEEeCCCCCCCceEEEEEecCC
Confidence 99999985 78999999999999999999999999999999999999999999999999998654444578999999999
Q ss_pred CCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 016808 192 PGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQ 271 (382)
Q Consensus 192 ~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~ 271 (382)
|||++.+.|+++|++++++++|.||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++|.+
T Consensus 214 pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~ 293 (404)
T 2jif_A 214 PGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQ 293 (404)
T ss_dssp TTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred CCeEeccCcccccCCCCceEEEEEccEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 99999999999999999999999999999999999999999988888888999999999999999999999999999999
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchHH
Q 016808 272 FGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATG 351 (382)
Q Consensus 272 ~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~ 351 (382)
||+|+.++|.+|++|++|.+++++++++++.+++.++.+.+...+++++|+++++.+.++++.++|++||.||++++|++
T Consensus 294 fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~~~~~~ 373 (404)
T 2jif_A 294 FGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVE 373 (404)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHH
T ss_pred cCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCcceecCCCcHH
Confidence 99999999999999999999999999999999999998877777899999999999999999999999999999999999
Q ss_pred HHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 016808 352 RLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 352 r~~rda~~~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
|+|||++...+++|++++++..+++.++++
T Consensus 374 r~~Rda~~~~i~~Gt~ei~~~~ia~~~~~~ 403 (404)
T 2jif_A 374 KYFRDAKIGTIYEGASNIQLNTIAKHIDAE 403 (404)
T ss_dssp HHHHHHGGGGTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHhhccceeecCCHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999864
No 8
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=2.3e-67 Score=504.62 Aligned_cols=345 Identities=31% Similarity=0.464 Sum_probs=330.3
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCch-hhHHhhhhhHHHHHHHhcCCHHHHHh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSV-GLSYGAHSNLCINQLVRHGSPAQKDK 110 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~-a~~~~~~~~~~~~~l~~~g~~~~~~~ 110 (382)
.|+.+.++ ++|+.|++.||+++.+|++|||.|+++.+.+.++|+++++|+++ ++.+..|...+...+..+|+++|+++
T Consensus 52 ~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~ 131 (403)
T 3p4t_A 52 WERAGEIPRELHRKAAELGLLGAGFPEDAGGSGGDGADPVVICEEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDT 131 (403)
T ss_dssp HHHHTSCCHHHHHHHHHTTCTTBTSCGGGTCCBCCTHHHHHHHHHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHH
T ss_pred HhhcCCCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHH
Confidence 45677788 99999999999999999999999999999999999999999999 88777776577788999999999999
Q ss_pred hhhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCC
Q 016808 111 YLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKG 190 (382)
Q Consensus 111 ~l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~ 190 (382)
|++++.+|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+..||+++|+++++++ +.+++++|+||++
T Consensus 132 ~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~-~~~g~~~flV~~~ 210 (403)
T 3p4t_A 132 YVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLDGDHYVINGAKTYITSGVRADYVVTAARTGGP-GAGGVSLIVVDKG 210 (403)
T ss_dssp THHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECSSS-SGGGEEEEEEETT
T ss_pred HHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEeCCEEEEEEEEEEecCCcccCEEEEEEEeCCC-CCCceEEEEEeCC
Confidence 999999999999999999999999999999999999999999999999999999999999999764 5568999999999
Q ss_pred CCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 016808 191 MPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQRE 270 (382)
Q Consensus 191 ~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~ 270 (382)
.|||++.++|+++|++++++++|+||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++|.
T Consensus 211 ~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~ 290 (403)
T 3p4t_A 211 TPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAERVGLATQAYAGAQRCLDLTVEWCRNRD 290 (403)
T ss_dssp CTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred CCCeEecCCCCcccCCCCCeeEEEEcceEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-hhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccch
Q 016808 271 QFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVD-PKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYA 349 (382)
Q Consensus 271 ~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~ 349 (382)
+||+|+.++|.+|++|++|.+++++++++++++++.++.+.+. ...++++|+++++.+.++++.++|++||.||+++++
T Consensus 291 ~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~ 370 (403)
T 3p4t_A 291 TFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGETNLIAEVCFAKNTAVEAGEWVANQAVQLFGGMGYMAESE 370 (403)
T ss_dssp ETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSH
T ss_pred cCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhChhhccCCCc
Confidence 9999999999999999999999999999999999999988766 788999999999999999999999999999999999
Q ss_pred HHHHHHhhccCcccCChHHHHHHHHHHHH
Q 016808 350 TGRLLRDAKLYEIGAGTSEIRRMIIGRAL 378 (382)
Q Consensus 350 l~r~~rda~~~~~~~g~~~~~~~~l~~~l 378 (382)
++|+|||++...+++|++++++..+++.+
T Consensus 371 ~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 399 (403)
T 3p4t_A 371 VERQYRDMRILGIGGGTTEILTSLAAKTL 399 (403)
T ss_dssp HHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcceeccCHHHHHHHHHHHHc
Confidence 99999999999999999999999999987
No 9
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=1.2e-67 Score=504.43 Aligned_cols=345 Identities=34% Similarity=0.592 Sum_probs=323.4
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+.+.+| +.|+.|++.||+++.+|++|||.|+++.+.+.++|+++++|+++++.+..|. .+...+..+|+++|+++|
T Consensus 42 ~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~ 120 (387)
T 3nf4_A 42 HEKDETYPEGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAARWASVAVAVSVHS-LSSHPLLVFGTEEQKKRW 120 (387)
T ss_dssp HHHHTCCCTTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HHTHHHHHHSCHHHHHHH
T ss_pred HhhhCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHH
Confidence 45677888 9999999999999999999999999999999999999999999999888887 778889999999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCCC
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGM 191 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~~ 191 (382)
++++.+|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+..||+++|+++++ ++.+++.+|+||++.
T Consensus 121 l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~--~~~~g~~~flV~~~~ 198 (387)
T 3nf4_A 121 LPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSWITHGGKADFYTLFARTG--EGSRGVSCFLVPADQ 198 (387)
T ss_dssp HHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECC----CCCEEEEEEETTC
T ss_pred HHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEeCCEEEEEeEEecccCCcccCEEEEEEEeC--CCCCceEEEEEECCC
Confidence 999999999999999999999999999999999999999999999999999999999999987 245678999999999
Q ss_pred CCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 016808 192 PGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQ 271 (382)
Q Consensus 192 ~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~ 271 (382)
|||++.++|+++|++++++++|+||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++|.+
T Consensus 199 pGv~~~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~ 278 (387)
T 3nf4_A 199 PGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQIAFSALDSGRLGIAAVATGLAQAALDEAVAYANERTA 278 (387)
T ss_dssp TTEEECCCCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCeEecCcccccccCCCCeeEEEEeeEEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchHH
Q 016808 272 FGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATG 351 (382)
Q Consensus 272 ~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~ 351 (382)
||+|+.++|.+|++|+++.+++++++++++++++.++.+.+...+++++|+++++.+.++++.++|++||.||++++|++
T Consensus 279 fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~G~~~~~~~~ 358 (387)
T 3nf4_A 279 FGRKIIDHQGLGFLLADMAAAVATARATYLDAARRRDQGRPYSQQASIAKLTATDAAMKVTTDAVQVFGGVGYTRDYRVE 358 (387)
T ss_dssp ---CTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHH
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCcHhhcCCCcHH
Confidence 99999999999999999999999999999999999998887888899999999999999999999999999999999999
Q ss_pred HHHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 352 RLLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 352 r~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
|+|||++...+++|++++++..+++.+++
T Consensus 359 r~~Rda~~~~i~~Gt~ei~~~~ia~~l~~ 387 (387)
T 3nf4_A 359 RYMREAKIMQIFEGTNQIQRLVIARGLTR 387 (387)
T ss_dssp HHHHHHHHHTTSSSCHHHHHHHHHHTTC-
T ss_pred HHHhHhhcCeeecChHHHHHHHHHHHHhC
Confidence 99999999999999999999999998864
No 10
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=3.2e-67 Score=502.67 Aligned_cols=348 Identities=36% Similarity=0.532 Sum_probs=329.2
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+.+.+| +.|+.|++.||+++.+|++|||.|+++.+.+.++|+++++|+++++.+ .|..++...+..+|+++|+++|
T Consensus 42 ~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~ 120 (396)
T 1egd_A 42 YDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAI-EGNSLGQMPIIIAGNDQQKKKY 120 (396)
T ss_dssp HHHHCCCCHHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHH-HHHHHHTHHHHHHCCHHHHHHH
T ss_pred HHhhCCCCHHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHHHHHhhCccHHHHH-HhhhHHHHHHHHhCCHHHHHHH
Confidence 45567788 999999999999999999999999999999999999999999999877 5654666678899999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCC---CCeEEEEEe
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS---KGITAFIIE 188 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~---~~~~~flVp 188 (382)
+|++.+|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+..||+++|+++++++.+. +++++|+||
T Consensus 121 l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~~~~g~~~flV~ 200 (396)
T 1egd_A 121 LGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVE 200 (396)
T ss_dssp HHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEECCCCTTSCGGGTEEEEEEE
T ss_pred HHHHhCCCceEEEEecCCCCCcchhhCeeEEEEeCCEEEEEEEEEcccCCcccCEEEEEEEeCCCCCCCCCCCeEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999998754333 578999999
Q ss_pred CCCCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016808 189 KGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQ 268 (382)
Q Consensus 189 ~~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~ 268 (382)
++.|||++.++|+++|++++++++|+||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++
T Consensus 201 ~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~ 280 (396)
T 1egd_A 201 ADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKERPVVAAGAVGLAQRALDEATKYALE 280 (396)
T ss_dssp TTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCeeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999988888888999999999999999999999999999
Q ss_pred hhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccc
Q 016808 269 REQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEY 348 (382)
Q Consensus 269 r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~ 348 (382)
|.+||+|+.++|.+|++|++|.+++++++++++.+++.++.+.+...+++++|+++++.+.++++.++|++||.||++++
T Consensus 281 R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~ 360 (396)
T 1egd_A 281 RKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEY 360 (396)
T ss_dssp CEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTBTTS
T ss_pred CccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCC
Confidence 99999999999999999999999999999999999999998877778899999999999999999999999999999999
Q ss_pred hHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 016808 349 ATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 349 ~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
+++|+|||++...+++|++++++..+++.++++
T Consensus 361 ~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~ 393 (396)
T 1egd_A 361 PVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDK 393 (396)
T ss_dssp SHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHhhCeeecCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999875
No 11
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.9e-67 Score=502.35 Aligned_cols=348 Identities=40% Similarity=0.626 Sum_probs=330.9
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCC---CCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHH
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLG---LGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQK 108 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~---~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~ 108 (382)
.|+.+.+| +.|++|++.||+++.+|++|||.| +++.+.+.++|+++++|+++++++..|...+...+..+|+++|+
T Consensus 31 ~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~ 110 (383)
T 1buc_A 31 RDHKGIYDKELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQK 110 (383)
T ss_dssp HHHHTCCCHHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHHHHCCHHHH
T ss_pred HhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHHHHHhhChHHHHHHHhhhhHHHHHHHHhCCHHHH
Confidence 45667788 999999999999999999999999 99999999999999999999998888754778899999999999
Q ss_pred HhhhhhhhcCCceeEEEecCCCCCCCcCCceeEEEEe-CCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEE
Q 016808 109 DKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRV-DGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 187 (382)
Q Consensus 109 ~~~l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~-~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flV 187 (382)
++|++++.+|+.++++++|||++|||...+.|+|+++ +|||+|||+|.|+||+..||+++|+++++++.+.+++++|+|
T Consensus 111 ~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV 190 (383)
T 1buc_A 111 EKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKSKGNHGITAFIL 190 (383)
T ss_dssp HHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEETTTTCSEEEEEEESCSSSSTTSEEEEEE
T ss_pred HHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEEEeccCCCCcCCEEEEEEEeCCCCCCCceEEEEE
Confidence 9999999999999999999999999999999999999 999999999999999999999999999875545568999999
Q ss_pred eCCCCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016808 188 EKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVR 267 (382)
Q Consensus 188 p~~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~ 267 (382)
|++.|||++.++|+++|++++++++|+||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|++
T Consensus 191 ~~~~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~ 270 (383)
T 1buc_A 191 EDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSK 270 (383)
T ss_dssp ETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCeEecCccccccccCCceeEEEEccEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998999999999999999999999999999999999998888888899999999999999999999999999
Q ss_pred hhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceeccc
Q 016808 268 QREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNE 347 (382)
Q Consensus 268 ~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~ 347 (382)
+|.+||+|+.++|.+|++|++|.+++++++++++++++.++.+.+....++++|+++++.+.++++.++|++||.||+++
T Consensus 271 ~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~ 350 (383)
T 1buc_A 271 QRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDAAIAKRVASDVAMRVTTEAVQIFGGYGYSEE 350 (383)
T ss_dssp HCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTT
T ss_pred hCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCC
Confidence 99999999999999999999999999999999999999998877777889999999999999999999999999999999
Q ss_pred chHHHHHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 348 YATGRLLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 348 ~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
+|++|+|||++...+++|++++++..+++.+++
T Consensus 351 ~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 383 (383)
T 1buc_A 351 YPVARHMRDAKITQIYEGTNEVQLMVTGGALLR 383 (383)
T ss_dssp SSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHTC
T ss_pred ChHHHHHHHhhcccccCCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999874
No 12
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.3e-67 Score=500.14 Aligned_cols=358 Identities=27% Similarity=0.369 Sum_probs=326.7
Q ss_pred cHHHHhHHhhhhhhcccccccccccccccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCch
Q 016808 6 GARSLCASFFTKKQKHSAAFSSTSLLFDDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSV 84 (382)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~ 84 (382)
.+++++++.+.+.... .|+.+.+| +.|++|++.||+++.+|++|||.|+++.+.+.++|+++++|+++
T Consensus 3 ~~r~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~ 71 (366)
T 1r2j_A 3 ERDALLTDLVGDRAAE-----------WDTSGELPRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSL 71 (366)
T ss_dssp CCHHHHHHHHSSCHHH-----------HHHHTCCCHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHhccccHHH-----------HhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHH
Confidence 5677777777664432 45567788 99999999999999999999999999999999999999999999
Q ss_pred hhHHhhhhhHHHHHHHhcCCHHHHHhhhhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCC
Q 016808 85 GLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVA 164 (382)
Q Consensus 85 a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a 164 (382)
++.+..|...+...+. +|+++|+++|+|++.+|+ ++++++|||+.|||...+.|+|++++|||+|||+|.|+||+..|
T Consensus 72 ~~~~~~~~~~~~~~l~-~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~A 149 (366)
T 1r2j_A 72 RSVMTSQGMAAWTVQR-LGDAGQRATFLKELTSGK-LAAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYA 149 (366)
T ss_dssp HHHHHHHHHHHHHHHH-HSCHHHHHHHHHHTTCC--CEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTC
T ss_pred HHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccCCccc
Confidence 9888877546677888 999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHH-HhhhhHH
Q 016808 165 QTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVM-MSGLDLE 243 (382)
Q Consensus 165 ~~~lv~a~~~~~~~~~~~~~flVp~~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~-~~~~~~~ 243 (382)
|+++|++++++ + ++++|+||++.|||++.+.|+++|++++++++|+||||+||+++++|.++.|+... ...+...
T Consensus 150 d~~~v~a~~~~--~--g~~~flV~~~~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~ 225 (366)
T 1r2j_A 150 DHLVVFGLQED--G--SGAVVVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYG 225 (366)
T ss_dssp SEEEEEEBCSS--S--CCEEEEEETTSTTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHH
T ss_pred CEEEEEEEeCC--C--ceEEEEEECCCCCeEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHH
Confidence 99999999864 2 68999999999999999999999999999999999999999999999988888777 7778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCChhhhhHHHH
Q 016808 244 RLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNG-KVDPKDCAGVIL 322 (382)
Q Consensus 244 ~~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~ak~ 322 (382)
|+.+++.++|+++++++.+++|+++|.+||+|+.++|.+|++|++|.+++++++++++.+++.++.+ .+...+++++|+
T Consensus 226 r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~~aK~ 305 (366)
T 1r2j_A 226 RKSVAWGCVGILRACRTAAVAHARTREQFGRPLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEGSPEMVPATILAKH 305 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999887 666778999999
Q ss_pred HHHHHHHHHHHHHHHhhcCceecccchHHHHHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 323 CAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 323 ~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..+++.+++
T Consensus 306 ~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~G~~~~~~~~ia~~~lg 363 (366)
T 1r2j_A 306 VAAERAAAGAATAAQVLASAGAREGHVVERAYRDAKLMEIIEGSSEMCRVMLAQHALA 363 (366)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGC--CCHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhCCeeecCCCcHHHHHHhccCceecCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999876
No 13
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=8e-67 Score=498.25 Aligned_cols=344 Identities=35% Similarity=0.563 Sum_probs=325.7
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhcc-CchhhHHhhhhhHHHHHHHhcCCHHHHHh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRAS-GSVGLSYGAHSNLCINQLVRHGSPAQKDK 110 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~-~~~a~~~~~~~~~~~~~l~~~g~~~~~~~ 110 (382)
.|+.+.+| +.|+.|.+.||+++.+|++|||.|+++.+.+.++|+++++| +++++.+ |...+...+..+|+++|+++
T Consensus 36 ~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~--~~~~~~~~l~~~g~~~q~~~ 113 (385)
T 2pg0_A 36 WEKRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVGSSLVGIGL--HNDIVTPYIASYGTEEQKQK 113 (385)
T ss_dssp HHHHTSCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCGGGHHHHH--HHHTTHHHHHHHCCHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHhhCCchHHHHH--HhhHHHHHHHHhCCHHHHHH
Confidence 45567788 99999999999999999999999999999999999999999 8988765 54467788999999999999
Q ss_pred hhhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCC--CCCCCeEEEEEe
Q 016808 111 YLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIK--AGSKGITAFIIE 188 (382)
Q Consensus 111 ~l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~--~~~~~~~~flVp 188 (382)
|++++.+|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+..|||++|+++++++ ++.+++++|+||
T Consensus 114 ~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~~~g~~~flV~ 193 (385)
T 2pg0_A 114 WLPKCVTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKTFITNGIHADLIVVACKTDPQAKPPHRGISLLVVE 193 (385)
T ss_dssp HHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEESCTTCSSGGGGEEEEEEE
T ss_pred HHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEecccCCcccCEEEEEEEeCCccCCCCCceEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999998643 244578999999
Q ss_pred CCCCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016808 189 KGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQ 268 (382)
Q Consensus 189 ~~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~ 268 (382)
++.|||++.++|+++|++++++++|+||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++
T Consensus 194 ~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~ 273 (385)
T 2pg0_A 194 RDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQ 273 (385)
T ss_dssp TTCTTEEECCCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEecCCccccccCCCceEEEEEcceEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999989999999999999999999999999999999999988888889999999999999999999999999999
Q ss_pred hhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccc
Q 016808 269 REQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEY 348 (382)
Q Consensus 269 r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~ 348 (382)
|.+||+|+.++|.+|++|++|.+++++++++++++++.++.+.+....++++|+++++.+.++++.++|++||.||++++
T Consensus 274 R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~g~~~~~ 353 (385)
T 2pg0_A 274 RTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEY 353 (385)
T ss_dssp CEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBTTS
T ss_pred CccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCC
Confidence 99999999999999999999999999999999999999998877788899999999999999999999999999999999
Q ss_pred hHHHHHHhhccCcccCChHHHHHHHHHHHH
Q 016808 349 ATGRLLRDAKLYEIGAGTSEIRRMIIGRAL 378 (382)
Q Consensus 349 ~l~r~~rda~~~~~~~g~~~~~~~~l~~~l 378 (382)
|++|+|||++...+++|++++++..+++.+
T Consensus 354 ~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~l 383 (385)
T 2pg0_A 354 EIARRYRDIPVSAIYAGTNEMMKTIIARQL 383 (385)
T ss_dssp HHHHHHHHGGGGGTTTSCHHHHHHHHHHHT
T ss_pred cHHHHHhhhcCceeecCHHHHHHHHHHHHh
Confidence 999999999999999999999999999875
No 14
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=9.1e-67 Score=499.20 Aligned_cols=348 Identities=68% Similarity=1.141 Sum_probs=329.1
Q ss_pred cccCCcH---HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHh
Q 016808 34 DTQLQDV---NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDK 110 (382)
Q Consensus 34 d~~~~~~---~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~ 110 (382)
|+.+.+| +.|+.|.+.||+++.+|++|||.|+++.+.+.++|+++++|+++++.+..|...+...+..+|+++|+++
T Consensus 40 d~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~ 119 (394)
T 1ivh_A 40 DRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEK 119 (394)
T ss_dssp HHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTHHHHHHHCCHHHHHH
T ss_pred HhcCCCCchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhchhHHHHHHHhhHHHHHHHHHhCCHHHHHH
Confidence 4444444 7999999999999999999999999999999999999999999999888875567889999999999999
Q ss_pred hhhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCC--CCCCCeEEEEEe
Q 016808 111 YLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIK--AGSKGITAFIIE 188 (382)
Q Consensus 111 ~l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~--~~~~~~~~flVp 188 (382)
|++++.+|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+..||+++|+++++++ ++.+++++|+||
T Consensus 120 ~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~~~~Ad~~~v~ar~~~~~~~~~~g~~~flV~ 199 (394)
T 1ivh_A 120 YLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAFIVE 199 (394)
T ss_dssp HHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETGGGCSEEEEEEESCTTCSSGGGGEEEEEEE
T ss_pred HHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEcCCEEEEEeEEEeeCCCCcCCEEEEEEEeCCcccCCCCCeEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999998644 234578999999
Q ss_pred CCCCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016808 189 KGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQ 268 (382)
Q Consensus 189 ~~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~ 268 (382)
++.|||++.+.|+++|++++++++|+||||+||+++++|.++.|+......+...|+.+++.++|+++++++.+++|+++
T Consensus 200 ~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~ 279 (394)
T 1ivh_A 200 KGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHV 279 (394)
T ss_dssp TTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCeEeccccccccCCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988888888999999999999999999999999999
Q ss_pred hhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccc
Q 016808 269 REQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEY 348 (382)
Q Consensus 269 r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~ 348 (382)
|.+||+|+.++|.+|++|++|.+++++++++++.+++.++.+.+....++++|+++++.+.++++.++|++||.||++++
T Consensus 280 R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~ 359 (394)
T 1ivh_A 280 REAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFGGNGYINDF 359 (394)
T ss_dssp CEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTS
T ss_pred CeeCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCc
Confidence 99999999999999999999999999999999999999998877778899999999999999999999999999999999
Q ss_pred hHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 016808 349 ATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 349 ~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
|++|+|||++...+++|++++++..+++.++++
T Consensus 360 ~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~ll~~ 392 (394)
T 1ivh_A 360 PMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNAD 392 (394)
T ss_dssp THHHHHHHHHHTTTTTSCHHHHHHHHHHHHHTC
T ss_pred hHHHHHHhcccccccCChHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999875
No 15
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.8e-66 Score=496.81 Aligned_cols=363 Identities=28% Similarity=0.463 Sum_probs=335.8
Q ss_pred cHHHHhHHhhhhhhcccccccccccccccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCch
Q 016808 6 GARSLCASFFTKKQKHSAAFSSTSLLFDDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSV 84 (382)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~ 84 (382)
.+++++++.+.+.... .|+.+.+| +.|+.|++.||+++.+|++|||.|+++.+.+.++|+++++|+++
T Consensus 29 ~~r~~~~~~~~~~~~~-----------~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~ 97 (393)
T 1rx0_A 29 VAFDFAAREMAPNMAE-----------WDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTST 97 (393)
T ss_dssp HHHHHHHHHTHHHHHH-----------HHHHTCCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhCCccHHH-----------HhhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCcch
Confidence 4455555555543322 45567788 99999999999999999999999999999999999999999999
Q ss_pred hhHHhhhhhHHHHHHHhcCCHHHHHhhhhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCC
Q 016808 85 GLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVA 164 (382)
Q Consensus 85 a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a 164 (382)
++.+..|. .+...+..+|+++|+++|++++.+|+.++++++|||+.|||...+.|+|++++|||+|||+|.|+||+..+
T Consensus 98 ~~~~~~~~-~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~A 176 (393)
T 1rx0_A 98 TAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGES 176 (393)
T ss_dssp HHHHHHHH-HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTC
T ss_pred hHHHHHhH-HHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEEEeecCCccC
Confidence 98888876 77788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHH
Q 016808 165 QTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLER 244 (382)
Q Consensus 165 ~~~lv~a~~~~~~~~~~~~~flVp~~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~ 244 (382)
|+++|++++++ ++.+++++|+||++.|||++.+.|+++|++++++++|+||||+||++++||.++.|+......+...|
T Consensus 177 d~~~v~a~~~~-~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r 255 (393)
T 1rx0_A 177 DIYVVMCRTGG-PGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGR 255 (393)
T ss_dssp SEEEEEEESSS-SSGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHH
T ss_pred CEEEEEEEcCC-CCCCceEEEEEeCCCCCeEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchHHHHHHHHHHHH
Confidence 99999999864 24457899999999999999999999999999999999999999999999999999888888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-ChhhhhHHHHH
Q 016808 245 LVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKV-DPKDCAGVILC 323 (382)
Q Consensus 245 ~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~ak~~ 323 (382)
+.+++.++|+++++++.+++|+++|.+||+|+.++|.+|++|++|.+++++++++++.+++.++.+.+ ....++++|++
T Consensus 256 ~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~ 335 (393)
T 1rx0_A 256 INIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAKLF 335 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999987643 45678999999
Q ss_pred HHHHHHHHHHHHHHhhcCceecccchHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 016808 324 AAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 324 ~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
+++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..+++.++++
T Consensus 336 a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~ 393 (393)
T 1rx0_A 336 ATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLLQE 393 (393)
T ss_dssp HHHHHHHHHHHHHHHTGGGGGBTTSTHHHHHHHHHHTTTSSSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcCCeeecCCChHHHHHHhccCceecCChHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999864
No 16
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=1.7e-67 Score=504.55 Aligned_cols=346 Identities=36% Similarity=0.565 Sum_probs=323.3
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+++.+| +.|+.|++.||+++.+|++|||.|+++.+.+.++|+++++|+++++.+..|...+...+..+|+++|+++|
T Consensus 45 ~~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~ 124 (396)
T 3ii9_A 45 AFRHETTDAAIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKY 124 (396)
T ss_dssp HHHHTCCCTHHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHHHHHHHHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHH
T ss_pred HHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHH
Confidence 45677888 99999999999999999999999999999999999999999999988888765667789999999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCCC
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGM 191 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~~ 191 (382)
++++.+|+.++++++|||++|||+..+.|+|++++|||+|||+|.|+||+.+||+++|++++++ ++.+++++|+||++.
T Consensus 125 l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~-~g~~g~~~flV~~~~ 203 (396)
T 3ii9_A 125 LPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLDE-DGRDEIRGFILEKGC 203 (396)
T ss_dssp HHHHHHTSSCEEEECCCCC------CCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEEEE-TTEEEEEEEEEETTC
T ss_pred HHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEeCCEEEEEEEEEeECCCccCCEEEEEEEecC-CCCCceEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999863 234568999999999
Q ss_pred CCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 016808 192 PGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQ 271 (382)
Q Consensus 192 ~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~ 271 (382)
|||++.+.|+++|++++++++|+||||+||++++++. +.|+......+...|+.+++.++|+++++++.+++|+++|.+
T Consensus 204 pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~-~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~ 282 (396)
T 3ii9_A 204 KGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPH-VKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQ 282 (396)
T ss_dssp TTEECCBCCCCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred CCeEeccccccccCCcCCeeEEEEccEEECHHHccCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCee
Confidence 9999999999999999999999999999999999977 778888888899999999999999999999999999999999
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchHH
Q 016808 272 FGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATG 351 (382)
Q Consensus 272 ~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~ 351 (382)
||+|+.++|.+|++|++|.+++++++++++++++.++.+.+....++++|+++++.+.++++.++|++||.||++++|++
T Consensus 283 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~ 362 (396)
T 3ii9_A 283 FGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVA 362 (396)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSCSGGGHHH
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCCcHH
Confidence 99999999999999999999999999999999999998877788899999999999999999999999999999999999
Q ss_pred HHHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 352 RLLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 352 r~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
|+|||++...+++|++++++..+++.+++
T Consensus 363 r~~Rda~~~~i~~Gt~~~~~~~ia~~llg 391 (396)
T 3ii9_A 363 RHLVNLEVVNTYEGTHDIHALILGRAQTG 391 (396)
T ss_dssp HHHHHHHHHHHHHCSSCHHHHHHHHHHHS
T ss_pred HHHhhhcCceeecCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999986
No 17
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=4.3e-66 Score=495.31 Aligned_cols=342 Identities=30% Similarity=0.457 Sum_probs=328.1
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+++.+| +.|+.|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++.+..|...+...+..+|+++|+++|
T Consensus 52 ~~~~~~~~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~ 130 (399)
T 3swo_A 52 WFESATLPSELAKEFGNLGVLGMHL-QGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEW 130 (399)
T ss_dssp HHHHTCCCTTHHHHHHHHTCTTTTS-CSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHH
T ss_pred HHhhCCCCHHHHHHHHHCCCCcCCh-hhhCCCCCCHHHHHHHHHHHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHH
Confidence 45667788 9999999999999999 999999999999999999999999999988888765778899999999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCCC
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGM 191 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~~ 191 (382)
++++.+|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+..||+++|++++++ ++++|+||++.
T Consensus 131 l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~-----g~~~flV~~~~ 205 (399)
T 3swo_A 131 LPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTDD-----GIRGFLVPTDT 205 (399)
T ss_dssp HHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEBCTT-----SCEEEEEETTS
T ss_pred HHHHhCCCeeeEEEecCCCCCCCCccceEEEEEeCCEEEEEEEEEeECCCCccCEEEEEEEeCC-----ceEEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999862 58999999999
Q ss_pred CCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 016808 192 PGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQ 271 (382)
Q Consensus 192 ~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~ 271 (382)
|||++.+.|+++|++++++++|+||||+||++++||. +.|+......+...|+.+++.++|+++++++.+++|+++|.+
T Consensus 206 pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~ 284 (399)
T 3swo_A 206 PGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPL-AEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREV 284 (399)
T ss_dssp TTEEEEECCCBSSCCSSCEEEEEEEEEEECGGGBCTT-CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred CCeEeecCcCcccCCCCceeEEEEccEEEcHHHcCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCee
Confidence 9999999999999999999999999999999999998 888888888999999999999999999999999999999999
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchHH
Q 016808 272 FGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATG 351 (382)
Q Consensus 272 ~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~ 351 (382)
||+|+.++|.+|++|++|.+++++++++++++++.++.+.+....++++|+++++.+.++++.++|++||.||++++|++
T Consensus 285 fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~ 364 (399)
T 3swo_A 285 FDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIARECRTLLGGSGITLEYSPL 364 (399)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBSSSTHH
T ss_pred CCcchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCCcHH
Confidence 99999999999999999999999999999999999998887888999999999999999999999999999999999999
Q ss_pred HHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 016808 352 RLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 352 r~~rda~~~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
|+|||++...+++|++++++..+++.+++.
T Consensus 365 r~~Rda~~~~i~~Gt~~i~~~~ia~~llg~ 394 (399)
T 3swo_A 365 RHANNLESVLTYEGTSEMHLLSIGKALTGK 394 (399)
T ss_dssp HHHHHHHHHHHSSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHhhcceeecCHHHHHHHHHHHHHcCc
Confidence 999999999999999999999999999873
No 18
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=6.3e-66 Score=492.09 Aligned_cols=343 Identities=29% Similarity=0.447 Sum_probs=322.2
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+.+.+| +.|++|++.||+++.+|++|||.|+++.+.+.++|+++++|+++++.+..|...+...+..+|+++|+++|
T Consensus 37 ~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~ 116 (385)
T 2eba_A 37 WWEEGVFPTHLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREF 116 (385)
T ss_dssp HHHTTCCCGGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHH
Confidence 35566788 99999999999999999999999999999999999999999999998888765667888999999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCc-CCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCC
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDV-VGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKG 190 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~-~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~ 190 (382)
+|++.+|+.++++++|||++|||+ ..+.|+|++++|||+|||+|.|+||+..|||++|++++++ + + +++|+||++
T Consensus 117 l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~--g-~-~~~flV~~~ 192 (385)
T 2eba_A 117 LPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAKDEG--G-E-VLGFLVPTD 192 (385)
T ss_dssp HHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC--CEEEEEEEEEEEETTTTCSEEEEEEECC-------EEEEEEETT
T ss_pred HHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEeCCEEEEEeeeeccCCCcccCEEEEEEEeCC--C-c-EEEEEEeCC
Confidence 999999999999999999999999 8999999999999999999999999999999999999863 2 3 889999999
Q ss_pred CCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 016808 191 MPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQRE 270 (382)
Q Consensus 191 ~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~ 270 (382)
.|||++.+.|+++|++++++++|+||||+||+++++ ..+.|+......+...|+.+++.++|+++++++.+++|+++|.
T Consensus 193 ~pGv~v~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~l-~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~ 271 (385)
T 2eba_A 193 TPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRL-PKALGLKAPLSCLTQARFGIAWGAMGALEAVYEEAVAFAKSRS 271 (385)
T ss_dssp STTEEEEECCSBSSSCSSCEEEEEEEEEEEEGGGBC-TTCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCB
T ss_pred CCCeEecccccccccccCceeEEEEccEEEcHHHcc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCe
Confidence 999999999999999999999999999999999999 6778888777888889999999999999999999999999999
Q ss_pred ccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchH
Q 016808 271 QFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYAT 350 (382)
Q Consensus 271 ~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l 350 (382)
+||+|+.++|.+|++|+++.+++++++++++.+++.++.+.+...+++++|.++++.+.++++.++|++||.||++++|+
T Consensus 272 ~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l 351 (385)
T 2eba_A 272 TFGEPLAKKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEGKLTPAQVSLAKRQNVWKALQAARMARDILGGSGITLEYHA 351 (385)
T ss_dssp SSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSH
T ss_pred eCCeeHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcChH
Confidence 99999999999999999999999999999999999999887777888999999999999999999999999999999999
Q ss_pred HHHHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 351 GRLLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 351 ~r~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
+|+|||++...+++|++++++..+++.+++
T Consensus 352 ~r~~Rda~~~~~~~G~~~~~~~~ia~~llg 381 (385)
T 2eba_A 352 IRHMLNLETVYTYEGTHDVHTLVLGREITG 381 (385)
T ss_dssp HHHHHHHHHHTTSSSCHHHHHHHHHHHHHS
T ss_pred HHHHHhccCceeeCChHHHHHHHHHHHHhC
Confidence 999999999999999999999999999975
No 19
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=8.9e-66 Score=493.59 Aligned_cols=341 Identities=30% Similarity=0.490 Sum_probs=326.1
Q ss_pred ccccCCcH--HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHh
Q 016808 33 DDTQLQDV--NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDK 110 (382)
Q Consensus 33 ~d~~~~~~--~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~ 110 (382)
.|+++.+| ++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++++..|...+...+..+|+++|+++
T Consensus 56 ~~~~~~~p~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~ 134 (403)
T 3sf6_A 56 WYEDGELPARELAVELGELGLLGMHL-KGYGCAGMSAVAYGLACLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQ 134 (403)
T ss_dssp HHHHTCCCHHHHHHHHHHTTCSSTTS-CSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHCCCCcccc-hhhCCCCCCHHHHHHHHHHHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHH
Confidence 34455554 8999999999999999 99999999999999999999999999998888876567889999999999999
Q ss_pred hhhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCC
Q 016808 111 YLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKG 190 (382)
Q Consensus 111 ~l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~ 190 (382)
|++++.+|+.++++++|||++|||+..+.|+|++++|||+|||+|.|+||+..||+++|++++++ ++++|+||++
T Consensus 135 ~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~ar~~~-----g~~~flV~~~ 209 (403)
T 3sf6_A 135 WLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITNGSVADVAVVWARTDE-----GIRGFVVPTD 209 (403)
T ss_dssp HHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEETT-----EEEEEEEETT
T ss_pred HHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEECCEEEEEEEEEeecCCcccCEEEEEEEeCC-----ceEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999863 5899999999
Q ss_pred CCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 016808 191 MPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQRE 270 (382)
Q Consensus 191 ~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~ 270 (382)
.|||++.+.|+++|++++++++|+||||+||++++||. +.|+......+...|+.+++.++|+++++++.+++|+++|.
T Consensus 210 ~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~ 288 (403)
T 3sf6_A 210 TPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPG-ATSLGAPLRCLNEARFGIVFGALGAARDCLETALAYACSRE 288 (403)
T ss_dssp STTEEEEECCSCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred CCCeEecCCCCccCCCCCceeEEEEccEEEcHHHccCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999998 78888888999999999999999999999999999999999
Q ss_pred ccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchH
Q 016808 271 QFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYAT 350 (382)
Q Consensus 271 ~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l 350 (382)
+||+|+.++|.+|++|++|.+++++++++++++++.++.+.+....++++|+++++.+.++++.++|++||.||++++|+
T Consensus 289 ~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~ 368 (403)
T 3sf6_A 289 QFDRPIGGFQLTQQKLADMTLEYGKGFLLALHLGRQKDAGELAPEQVSLGKLNNVREAIEIARTARTVLGASGITGEYPV 368 (403)
T ss_dssp ETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSH
T ss_pred ccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCeEccccCcH
Confidence 99999999999999999999999999999999999999887788899999999999999999999999999999999999
Q ss_pred HHHHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 351 GRLLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 351 ~r~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
+|+|||++...+++|++++++..+++.+++
T Consensus 369 ~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg 398 (403)
T 3sf6_A 369 MRHANNLESVLTYEGTSEMHTLIIGQALTG 398 (403)
T ss_dssp HHHHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred HHHHhhcccceeecCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999986
No 20
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=1.7e-65 Score=494.87 Aligned_cols=342 Identities=28% Similarity=0.457 Sum_probs=323.3
Q ss_pred cccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhhh
Q 016808 34 DTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYL 112 (382)
Q Consensus 34 d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l 112 (382)
++.+.+| ++|+.|.+.||+++.+| +|||.|+++.+.+.++|+++++|+++++.+..|..++...+..+|+++|+++|+
T Consensus 82 ~~~~~~p~~~~~~l~e~Gl~~l~~p-e~GG~G~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l 160 (436)
T 2ix5_A 82 WEKAEFPFHITPKLGAMGVAGGSIK-GYGCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYL 160 (436)
T ss_dssp HHHTCCCGGGHHHHHTTTCTTTTCC-STTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHcCCCcCcCC-CCCCCCCCHHHHHHHHHHHHhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHH
Confidence 3456788 99999999999999999 999999999999999999999999998877777656778899999999999999
Q ss_pred hhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCCCC
Q 016808 113 PKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMP 192 (382)
Q Consensus 113 ~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~~~ 192 (382)
+++.+|+.++|+++|||++|||...+.|+|++++|||+|||+|.|+||+..|||++|+|+++++ .++.+|+||++.|
T Consensus 161 ~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~gdg~vLnG~K~~is~a~~Ad~~lv~Ar~~~~---~~~~~flV~~~~p 237 (436)
T 2ix5_A 161 PSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTT---NQINGFIVKKDAP 237 (436)
T ss_dssp HHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEETTT---SSEEEEEEETTCT
T ss_pred HHHhCCCeeeEEEecCCCCCCCcccceEEEEEeCCEEEEeeeccCCCCCcccCEEEEEEEECCC---CcEEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999999998642 3688999999999
Q ss_pred CeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 016808 193 GFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQF 272 (382)
Q Consensus 193 gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~~ 272 (382)
||++.+.|+++|++++++++|+||||+||++++++.. .++......+...|+.+++.++|+++++++.+++|+++|.+|
T Consensus 238 Gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~-~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~qf 316 (436)
T 2ix5_A 238 GLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQF 316 (436)
T ss_dssp TEEEEECCCBSSSTTSCEEEEEEEEEEEEGGGBCTTC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEET
T ss_pred CeEeeccccccCCCcCCceeEEeccEEECHHHcCCcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeC
Confidence 9999999999999999999999999999999999876 467778888899999999999999999999999999999999
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchHHH
Q 016808 273 GRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGR 352 (382)
Q Consensus 273 g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r 352 (382)
|+|+.++|.+|++|++|.+++++++++++++++.++.+.+...+++++|+++++.+.++++.++|++||.||+++++++|
T Consensus 317 G~pi~~~q~vq~~la~~~~~~~aar~l~~~aa~~~d~g~~~~~~as~aK~~a~e~a~~v~~~a~q~~Gg~G~~~e~~l~r 396 (436)
T 2ix5_A 317 GAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWISSKARETASLGRELLGGNGILADFLVAK 396 (436)
T ss_dssp TEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBGGGSHHH
T ss_pred CcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCChHHH
Confidence 99999999999999999999999999999999999987767778999999999999999999999999999999999999
Q ss_pred HHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 353 LLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 353 ~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
+|||++...+++|++++++..+++.+++
T Consensus 397 ~~Rda~~~~i~~Gt~ei~~~~iar~llg 424 (436)
T 2ix5_A 397 AFCDLEPIYTYEGTYDINTLVTGREVTG 424 (436)
T ss_dssp HHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred HHHHhhcceeecCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999976
No 21
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=1.2e-65 Score=494.76 Aligned_cols=344 Identities=23% Similarity=0.290 Sum_probs=320.1
Q ss_pred CcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhh-hhhHHHHHHHhcCCHHHHHhhhhhh
Q 016808 38 QDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGA-HSNLCINQLVRHGSPAQKDKYLPKL 115 (382)
Q Consensus 38 ~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~-~~~~~~~~l~~~g~~~~~~~~l~~l 115 (382)
.++ ++|+.|++.||+++.+|++|||.|+++.+.+.++|++++.|.+..+.... +...+...|..+|+++|+++|++++
T Consensus 58 ~~~~~~~~~l~e~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~ 137 (415)
T 4hr3_A 58 PELDSLKAKARAAGLWNLFLPDPELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPL 137 (415)
T ss_dssp THHHHHHHHHHHTTCSSTTCCCTTTSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHH
T ss_pred hhHHHHHHHHHhCCCcCcCCCHHHCCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHH
Confidence 367 99999999999999999999999999999999999999987655443322 2223347899999999999999999
Q ss_pred hcCCceeEEEecCCC-CCCCcCCceeEEEEeCCeEEEEeEEEeecCCCC--CcEEEEEEEeCCC-CCCCCeEEEEEeCCC
Q 016808 116 ISGEHVGALAMSEPN-AGSDVVGMKCKADRVDGGYIINGNKMWCTNGPV--AQTLVVYAKTDIK-AGSKGITAFIIEKGM 191 (382)
Q Consensus 116 ~~g~~~~~~~~te~~-~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~--a~~~lv~a~~~~~-~~~~~~~~flVp~~~ 191 (382)
.+|+.++|+++|||+ +|||+..+.|+|++++|||+|||+|.|+||+.+ ||+++|+++++++ ++.+++++|+||++.
T Consensus 138 ~~G~~~~~~a~tEp~~~gsd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~~~~~~~~~g~~~flV~~~~ 217 (415)
T 4hr3_A 138 LEGDIRSAFCMTEPDVASSDATNMAATAVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDT 217 (415)
T ss_dssp HTTSCEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCTTSCTTSSEEEEEEETTS
T ss_pred hCCCceeEEEEcCCCCCCCchhhCeeEEEEECCEEEEeeEEeeECCCCCCCCCEEEEEEEeCCCCCCCCceEEEEEEcCC
Confidence 999999999999999 999999999999999999999999999999966 9999999999754 344689999999999
Q ss_pred CCeeeccccccccCCCCC--eeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 016808 192 PGFSTAQKLDKLGMRGSD--TCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQR 269 (382)
Q Consensus 192 ~gv~~~~~~~~~G~~~~~--~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r 269 (382)
|||++.++|+++|+++++ +++|+||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++|
T Consensus 218 pGv~v~~~~~~~g~r~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R 297 (415)
T 4hr3_A 218 PGITVERMLPTMGFYDEPGGHGVVSFDNVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDR 297 (415)
T ss_dssp TTEEEEEECCBTTBCCTTTCEEEEEEEEEEEEGGGBSSCTTCHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CceEecCCCCccccCCCCCCeeEEEEccEEECHHHcCCCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999987 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceeccc
Q 016808 270 EQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDN--GKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNE 347 (382)
Q Consensus 270 ~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~ 347 (382)
++||+|+.++|.+|++|++|.+++++++++++++++.++. +.+....++++|+++++.+.++++.++|++||.||+++
T Consensus 298 ~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~qi~Gg~g~~~~ 377 (415)
T 4hr3_A 298 TAFGKPLVNLGGNRERIADARIAINQTRLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNMAQQVIDMAIQIHGGGGLSND 377 (415)
T ss_dssp EETTEEGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSSS
T ss_pred ccCCCcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCC
Confidence 9999999999999999999999999999999999999987 44567789999999999999999999999999999999
Q ss_pred chHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 016808 348 YATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 348 ~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
+|++|+|||++...+++|++++++..+++.++++
T Consensus 378 ~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l~~ 411 (415)
T 4hr3_A 378 FPLAAAWVNARALRLADGPDEVHRGVVARIELAK 411 (415)
T ss_dssp SSHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHhhhheeecCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999985
No 22
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=1.2e-65 Score=492.12 Aligned_cols=344 Identities=38% Similarity=0.639 Sum_probs=325.8
Q ss_pred ccccCCcH--HHHHHHHHcCCCCCCCCccCCCCCC--CHHHHHHHHHHHHhccCchhhHHhhhhhHHHH-HHHhcCCHHH
Q 016808 33 DDTQLQDV--NLWKLMGNFNLHGITAPQEYGGLGL--GYLYHCIAMEEISRASGSVGLSYGAHSNLCIN-QLVRHGSPAQ 107 (382)
Q Consensus 33 ~d~~~~~~--~~~~~l~~~Gl~~~~vP~~~GG~~~--~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~-~l~~~g~~~~ 107 (382)
.|+.+.+| +.|++|++.||+++.+|++|||.|+ ++.+.+.++|+++++|+++++.+..|. .+.. .+..+|+++|
T Consensus 31 ~d~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q 109 (397)
T 3mpi_A 31 WDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIARGSSALRVQLNMEV-LGCAYTILTYGSEAL 109 (397)
T ss_dssp HHHHTCCCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHT-TTTHHHHHHHSCHHH
T ss_pred HHhcCCCCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHHHHHHHHhhCchHHHHHHHHH-HhHHHHHHHhCCHHH
Confidence 34445555 8999999999999999999999999 999999999999999999999888875 6556 8999999999
Q ss_pred HHhhhhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEE
Q 016808 108 KDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 187 (382)
Q Consensus 108 ~~~~l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flV 187 (382)
+++|++++.+|+.++++++|||+.|||...+.|+|++++|||+|||+|.|+||+..||+++|+++++++++.+++.+|+|
T Consensus 110 ~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV 189 (397)
T 3mpi_A 110 KKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIYYAYTDKAAGSRGLSAFVI 189 (397)
T ss_dssp HHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSSEEEEEESCGGGGGGSEEEEEE
T ss_pred HHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEeCCEEEEEEEEEeeCCCcccCEEEEEEEcCCCCCCCceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999876545567899999
Q ss_pred -eCCCCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016808 188 -EKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYV 266 (382)
Q Consensus 188 -p~~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~ 266 (382)
|++.|||++ ++|+++|++++++++|+||||+||+++++|.++.|+......+...++.+++.++|+++++++.+++|+
T Consensus 190 ~~~~~~Gv~v-~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~~a 268 (397)
T 3mpi_A 190 EPRNFPGIKT-SNLEKLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYC 268 (397)
T ss_dssp CTTTSTTEEE-EECCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCeEe-ccCccccCcCCceeEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred hhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceec
Q 016808 267 RQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNG-KVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYV 345 (382)
Q Consensus 267 ~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~ 345 (382)
++|.+||+|+.++|.+|++|++|.+++++++++++++++.++.+ .+....++++|+++++.+.++++.++|++||.||+
T Consensus 269 ~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~ 348 (397)
T 3mpi_A 269 NERRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNNGLDVAMAKYAAGEAVSKCANYAMRILGAYGYS 348 (397)
T ss_dssp HHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTEEHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGS
T ss_pred hhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 99999999999999999999999999999999999999999987 56677899999999999999999999999999999
Q ss_pred ccchHHHHHHhhccCcccCChHHHHHHHHH-HHH
Q 016808 346 NEYATGRLLRDAKLYEIGAGTSEIRRMIIG-RAL 378 (382)
Q Consensus 346 ~~~~l~r~~rda~~~~~~~g~~~~~~~~l~-~~l 378 (382)
+++|++|+|||++.+++++|++++++..++ +.+
T Consensus 349 ~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l 382 (397)
T 3mpi_A 349 TEYPVARFYRDAPTYYMVEGSANICKMIIALDQL 382 (397)
T ss_dssp TTSHHHHHHHHTTHHHHSSSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHhhccceeeecCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999 766
No 23
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=1.3e-64 Score=504.10 Aligned_cols=339 Identities=34% Similarity=0.582 Sum_probs=315.9
Q ss_pred CcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhhhhhhh
Q 016808 38 QDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLI 116 (382)
Q Consensus 38 ~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~ 116 (382)
.++ ++|+.+.+.||+++.+|++|||.|+++.+.+.++|+++++++ .+..+..|...+...+..+|+++|+++|+|++.
T Consensus 65 ~~~~~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~~~~~-~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la 143 (597)
T 3owa_A 65 DRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRAGG-FAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLA 143 (597)
T ss_dssp HHHHHHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHHGGGTH-HHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHccch-HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 567 999999999999999999999999999999999999999864 444455555456667889999999999999999
Q ss_pred cCCceeEEEecCCCCCCCcCCceeEEEEeC--CeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCCCCCe
Q 016808 117 SGEHVGALAMSEPNAGSDVVGMKCKADRVD--GGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGF 194 (382)
Q Consensus 117 ~g~~~~~~~~te~~~gsd~~~~~~~a~~~~--~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~~~gv 194 (382)
+|+.++++++|||++|||....+|+|++++ ++|+|||+|.|+||+..||+++|+|++++ .++++|+||++.|||
T Consensus 144 ~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~is~a~~Ad~~lV~Art~~----~g~s~flV~~~~pGv 219 (597)
T 3owa_A 144 TGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDG----EHFSAFIVEKDYAGV 219 (597)
T ss_dssp HTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT----TEEEEEEEETTSTTE
T ss_pred CCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEeeEEEEeCCCccCCEEEEEEEeCC----CceEEEEEeCCCCCe
Confidence 999999999999999999999999999864 45999999999999999999999999864 278999999999999
Q ss_pred eeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Q 016808 195 STAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGR 274 (382)
Q Consensus 195 ~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~~g~ 274 (382)
++.+.|+++|++++++++|.||||+||.+++||.++.|+......+..+|+.+++.++|+++++++.+++|+++|.+||+
T Consensus 220 ~v~~~~~~~Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~ 299 (597)
T 3owa_A 220 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQ 299 (597)
T ss_dssp EECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE
T ss_pred EEecccccccCCCCCceEEEEeceeecHHHhcCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------------CChhhhhHHHHHHHHHHHHHHHHH
Q 016808 275 PLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGK-------------------VDPKDCAGVILCAAERATQVTLQA 335 (382)
Q Consensus 275 ~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~-------------------~~~~~~~~ak~~~~~~a~~~~~~~ 335 (382)
|+.++|.+|++|++|.+++++++++++++++.+|.+. +...+++++|+++++.+.++++.+
T Consensus 300 pi~~~q~vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~aK~~ase~a~~v~~~a 379 (597)
T 3owa_A 300 PIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEG 379 (597)
T ss_dssp EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999887542 224568899999999999999999
Q ss_pred HHhhcCceecccchHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 016808 336 IQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 336 ~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
+|++||.||++++|++|+|||++..++++|++++++..+++.++++
T Consensus 380 ~qi~GG~G~~~e~~ler~~RDar~~~i~eGt~ei~r~~Ia~~ll~~ 425 (597)
T 3owa_A 380 VQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRK 425 (597)
T ss_dssp HHHHGGGGGBTTSHHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHH
T ss_pred HHhhCCccccccChHHHHHHHhhhhheeCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999874
No 24
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=8.5e-64 Score=478.49 Aligned_cols=342 Identities=31% Similarity=0.459 Sum_probs=320.7
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+.+.+| +.|+.|++.||+++.+ ++|||.|+++.+.+.++|++++.|+++++.+..|.+++...+..+|+++|+++|
T Consensus 40 ~~~~~~~~~~~~~~l~~~Gl~~l~~-~~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~ 118 (392)
T 1siq_A 40 ANRNEVFHREIISEMGELGVLGPTI-KGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKY 118 (392)
T ss_dssp HHHHTCCCTHHHHHHHHTTCSSTTC-EETTEECCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHH
T ss_pred HHhhCCCCHHHHHHHHhCCCCcccH-HhhCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHH
Confidence 34566788 9999999999999999 999999999999999999999999999887776654567788899999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEe--CCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeC
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRV--DGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEK 189 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~--~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~ 189 (382)
++++.+|+.++++++|||+.|||+..+.|+|+++ ++||+|||+|.|+||+..|||++|++++++ .++.+|+||+
T Consensus 119 l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~a~~~~----g~~~~flV~~ 194 (392)
T 1siq_A 119 LPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED----GCIRGFLLEK 194 (392)
T ss_dssp HHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEEEEETGGGCSEEEEEEEETT----SCEEEEEEET
T ss_pred HHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEEEEEEeecCCcccCEEEEEEEECC----CCEEEEEEeC
Confidence 9999999999999999999999999999999999 999999999999999999999999999863 1478999999
Q ss_pred CCCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 016808 190 GMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQR 269 (382)
Q Consensus 190 ~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r 269 (382)
+.|||++.+.|+++|++++++++|+||||+||++++++.. .|+......+...|+.+++.++|+++++++.+++|+++|
T Consensus 195 ~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~-~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R 273 (392)
T 1siq_A 195 GMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGA-SSLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDR 273 (392)
T ss_dssp TCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEeccccccccccCCceEEEEEccEEECHHHcCCcc-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999875 466666677888899999999999999999999999999
Q ss_pred hccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccch
Q 016808 270 EQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYA 349 (382)
Q Consensus 270 ~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~ 349 (382)
.+||+|+.++|.+|++|++|.+++++++++++++++.++.+.+....++++|.++++.+.++++.++|++||.||++++|
T Consensus 274 ~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~q~~Gg~g~~~~~~ 353 (392)
T 1siq_A 274 MQFGVPLARNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARDMLGGNGISDEYH 353 (392)
T ss_dssp EETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGGGS
T ss_pred eeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCc
Confidence 99999999999999999999999999999999999999987767778899999999999999999999999999999999
Q ss_pred HHHHHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 350 TGRLLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 350 l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
++|+|||++...+++|++++++..+++.+++
T Consensus 354 l~r~~Rd~~~~~~~~G~~~~~~~~i~~~llg 384 (392)
T 1siq_A 354 VIRHAMNLEAVNTYEGTHDIHALILGRAITG 384 (392)
T ss_dssp HHHHHHHHHHHTTSSSCHHHHHHHHHHHHHS
T ss_pred HHHHHhhCcCCeeecCcHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999976
No 25
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.7e-63 Score=496.41 Aligned_cols=340 Identities=36% Similarity=0.590 Sum_probs=319.7
Q ss_pred CCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhhhhhh
Q 016808 37 LQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKL 115 (382)
Q Consensus 37 ~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l 115 (382)
..+| +.|+.|++.||+++.+|++|||.|+++.+.+.++|++ ..|+++++.+..|...+...+..+|+++|+++|+|++
T Consensus 59 ~~~p~~~~~~l~e~Gl~~l~vPee~GG~g~~~~~~~~v~eel-~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l 137 (577)
T 2z1q_A 59 LELNVPLMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEEL-SGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKL 137 (577)
T ss_dssp GGGHHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHH-TTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHH
T ss_pred CCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH-hhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4678 9999999999999999999999999999999999999 7899999888877655667899999999999999999
Q ss_pred hcCCceeEEEecCCCCCCCcCCceeEEEEe--CCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCCCCC
Q 016808 116 ISGEHVGALAMSEPNAGSDVVGMKCKADRV--DGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPG 193 (382)
Q Consensus 116 ~~g~~~~~~~~te~~~gsd~~~~~~~a~~~--~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~~~g 193 (382)
.+|+.++|+++|||++|||...+.|+|+++ +++|+|||+|.|+||+..||+++|+|++++ .++++|+||++.||
T Consensus 138 ~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~it~a~~Ad~~~V~Ar~~g----~gis~flVp~~~pG 213 (577)
T 2z1q_A 138 ASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVDG----EHFTAFLVERDTPG 213 (577)
T ss_dssp HHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT----TEEEEEEEETTCTT
T ss_pred hCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEEEEeeCCCCCCccCEEEEEEEeCC----CeeEEEEEeCCCCC
Confidence 999999999999999999999999999984 457999999999999999999999999863 47899999999999
Q ss_pred eeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Q 016808 194 FSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFG 273 (382)
Q Consensus 194 v~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~~g 273 (382)
|++.+.|+++|++++++++|.||||+||.+++||.++.|+......+..+|+.+++.++|+++++++.+++|+++|.+||
T Consensus 214 v~v~~~~~~~G~~~~~~~~v~fddv~VP~~~llg~~g~g~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg 293 (577)
T 2z1q_A 214 LSFGPEEKKMGIKASSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFG 293 (577)
T ss_dssp EEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSS
T ss_pred eEecCCCCCCCCCCCceeEEEecceeccHHHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCC
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CCChhhhhHHHHHHHHHHHHHHHHHHHhh
Q 016808 274 RPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNG--------------KVDPKDCAGVILCAAERATQVTLQAIQCL 339 (382)
Q Consensus 274 ~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~--------------~~~~~~~~~ak~~~~~~a~~~~~~~~~~~ 339 (382)
+||.++|.+|++|++|.+.+++++++++.++..+|.+ .+....++++|+++++.+.++++.++|+|
T Consensus 294 ~pi~~~q~vq~~La~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~a~aK~~ase~a~~v~~~a~qi~ 373 (577)
T 2z1q_A 294 RPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQIH 373 (577)
T ss_dssp SBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccchhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999888754 23456788999999999999999999999
Q ss_pred cCceecccchHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 016808 340 GGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 340 Gg~g~~~~~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
||.||+.++|++|+|||++...+++|++++++..++++++++
T Consensus 374 GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~~l~~ 415 (577)
T 2z1q_A 374 GGYGYSQEYPIERAYRDARINRIFEGTNEINRLLIPGMLLRR 415 (577)
T ss_dssp GGGGGBTTSHHHHHHHHHGGGGTTTSCHHHHHHHTTGGGSCC
T ss_pred CCeeecCCChHHHHHhhCcceeeeCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999888764
No 26
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=2.4e-62 Score=489.16 Aligned_cols=345 Identities=33% Similarity=0.534 Sum_probs=320.9
Q ss_pred cccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhhh
Q 016808 34 DTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYL 112 (382)
Q Consensus 34 d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l 112 (382)
|+...+| +.|+.+++.||+++.+|++|||.|+++.+.+.++|+++++|+++++.+..|...+...|..+|+++|+++|+
T Consensus 75 d~~~~~p~~~~~~l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~L 154 (607)
T 2uxw_A 75 DALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYL 154 (607)
T ss_dssp HHHTSCCHHHHHHHHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHcCCcCCCCChhhCCCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 4456788 999999999999999999999999999999999999999999999888877535468899999999999999
Q ss_pred hhhhcCCceeEEEecCCCCCCCcCCceeEEEEeC--CeEEEEeEEEeecCCCCCcEEEEEEEeCCCC---C--CCCeEEE
Q 016808 113 PKLISGEHVGALAMSEPNAGSDVVGMKCKADRVD--GGYIINGNKMWCTNGPVAQTLVVYAKTDIKA---G--SKGITAF 185 (382)
Q Consensus 113 ~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~--~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~---~--~~~~~~f 185 (382)
|++.+|+.++|+++|||+.|||...+.|+|++++ ++|+|||+|.|+|++..+|+++|+|++++.+ + .+++++|
T Consensus 155 p~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar~~~~~~~~g~~~~gis~f 234 (607)
T 2uxw_A 155 PKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAF 234 (607)
T ss_dssp HHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred HHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEEecCCCcccCCCCCceEEE
Confidence 9999999999999999999999999999999974 4799999999999999999999999985321 1 3578999
Q ss_pred EEeCCCCCeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016808 186 IIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPY 265 (382)
Q Consensus 186 lVp~~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~ 265 (382)
+||++.|||++.+.|+++|++++++++|+|+||+||.+++||.++.|+......+..+|+.+++.++|+++++++.+++|
T Consensus 235 lVp~~~~Gv~v~~~~~~~G~rg~~t~~v~fddv~VP~~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~y 314 (607)
T 2uxw_A 235 VVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDH 314 (607)
T ss_dssp EEEGGGSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCeEEecCccccCCCCCCeeEEEeccEEecHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred hhhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CChhhhhHHHHHHHHHHHHHHHHHHHhhcCcee
Q 016808 266 VRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGK-VDPKDCAGVILCAAERATQVTLQAIQCLGGNGY 344 (382)
Q Consensus 266 ~~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~ 344 (382)
+++|.+||+||.++|.+|++|++|.+.+++++++++.++..+|.+. +....++++|+++++.+.++++.++|++||.||
T Consensus 315 a~~R~qfG~pi~~~~~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~aK~~~se~a~~v~~~a~qv~GG~G~ 394 (607)
T 2uxw_A 315 ATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGF 394 (607)
T ss_dssp HHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHhccccCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999999999999999999999999999999999999998763 346788999999999999999999999999999
Q ss_pred cccchHHHHHHhhccCcccCChHHHHHHHHHHHH
Q 016808 345 VNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRAL 378 (382)
Q Consensus 345 ~~~~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l 378 (382)
+++++++|+|||++..++++|++++++..++..-
T Consensus 395 ~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~g 428 (607)
T 2uxw_A 395 MKEPGVERVLRDLRIFRIFEGTNDILRLFVALQG 428 (607)
T ss_dssp SSTTSHHHHHHHHGGGGTSSSCHHHHHHHHHHHH
T ss_pred cCccHHHHHHHhcccceeeCChHHHHHHHHHHHH
Confidence 9999999999999999999999999999885443
No 27
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=2.7e-62 Score=474.71 Aligned_cols=340 Identities=21% Similarity=0.314 Sum_probs=315.5
Q ss_pred HHHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhhhhhhhcC-
Q 016808 40 VNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISG- 118 (382)
Q Consensus 40 ~~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g- 118 (382)
.++|++|++.||+++.+|++|||.|+++.+.+.++|+|++.|+++++.+..+. ++...+..+|+++ +++|++++.+|
T Consensus 48 ~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~-~~~~l~~~~~G~ 125 (438)
T 3mkh_A 48 QPTYAAAVSAGILKGQISPAHGGTGGTLIESAILVEECYSVEPSAALTIFATG-LGLTPINLAAGPQ-HAEFLAPFLSGE 125 (438)
T ss_dssp HHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHHCCGG-GHHHHGGGSSSC
T ss_pred HHHHHHHHhCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhChhHHHHHHHhh-HHHHHHHhhCCHH-HHHHHHHHhcCC
Confidence 38999999999999999999999999999999999999999999998877665 6677788899999 89999999996
Q ss_pred -CceeEEEecCCCCCC-----CcCCceeEEEEeCCeEEEEeEEEeecCCC-----CCcEEEEEEEeCC------CCCCCC
Q 016808 119 -EHVGALAMSEPNAGS-----DVVGMKCKADRVDGGYIINGNKMWCTNGP-----VAQTLVVYAKTDI------KAGSKG 181 (382)
Q Consensus 119 -~~~~~~~~te~~~gs-----d~~~~~~~a~~~~~g~~l~G~k~~vs~~~-----~a~~~lv~a~~~~------~~~~~~ 181 (382)
+.++|+++|||++|| |...+.|+|++++|||+|||+|.|+||+. .||+++|++++++ .++..+
T Consensus 126 g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g 205 (438)
T 3mkh_A 126 GSPLASLVFSEPGGVANALEKGAPGFQTTARLEGDEWVINGEKMWATNCAGWDFKGCDLACVVCRDATTPLEEGQDPENK 205 (438)
T ss_dssp SCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEETTEEEEEEEECSCTTTTCTTSSCCSEEEEEEEECSSCCCTTCCGGGG
T ss_pred CCceEEEEEccCCCCCCccccccccceeEEEEeCCEEEEEeEEEEecCCCccccccCcEEEEEEEecCcccCcccCCCCc
Confidence 589999999999998 58889999999999999999999999997 8999999999853 122357
Q ss_pred eEEEEEeCCC-----CC-eeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHH
Q 016808 182 ITAFIIEKGM-----PG-FSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIM 255 (382)
Q Consensus 182 ~~~flVp~~~-----~g-v~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~ 255 (382)
+++|+||++. || |++.++|+++|++++++++|+||||+||++++||.++.|+......+...++.+++.++|++
T Consensus 206 ~~~flV~~~~~~~~~pG~v~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~lG~a 285 (438)
T 3mkh_A 206 VMIILVTRADLDRNGEGSFEVLRHVATPGHTSVSGPHVRYTNVRVPTKNVLCPAGQGAKVAFGAFDGSAVLVGAMGVGLM 285 (438)
T ss_dssp EEEEEEEHHHHHHHCTTSEEEEECCCCSSCTTCCCCEEEEEEEEEEGGGEEECTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCccccCCCCcEEecCcCCCcCCcCCCceEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999875 88 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccC-CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC----hhhhhHHHHHHHHHHHH
Q 016808 256 QACLDVVLPYVRQREQFG-RPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVD----PKDCAGVILCAAERATQ 330 (382)
Q Consensus 256 ~~al~~~~~~~~~r~~~g-~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~~~~ak~~~~~~a~~ 330 (382)
+++++.+++|+++|.+|| +|+.++|.+|++|++|.+++++++++++++++.++.+.+. ...++++|+++++.+.+
T Consensus 286 ~~al~~a~~ya~~R~~~g~~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~aK~~a~e~a~~ 365 (438)
T 3mkh_A 286 RAAFDAALKFAKEDNRGGAVPLLERQAFADLLSGVKIQTEAARALTWKAAHAMENGPGDYDARRELALAAKVFCSEAAVK 365 (438)
T ss_dssp HHHHHHHHHHHHHCCTTCSSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcEeCCCeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999999999999876542 22367899999999999
Q ss_pred HHHHHHHhhcCceecccchHHHHHHhhccCcccCChH-HHHHHHHHHHHHhc
Q 016808 331 VTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTS-EIRRMIIGRALLKQ 381 (382)
Q Consensus 331 ~~~~~~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g~~-~~~~~~l~~~l~~~ 381 (382)
+++.++|++||.||++++|++|+|||++.+.+++|++ ++++..+++.++++
T Consensus 366 ~~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~i~~Gt~~~v~~~~i~r~ll~~ 417 (438)
T 3mkh_A 366 ACTDVINAVGISAYDLQRPFSDLLNTAVVLPIFDGGNVGIRRRHLQQLMLKP 417 (438)
T ss_dssp HHHHHHHHHGGGGGCTTSSHHHHHHHHTHHHHSSSCTTTTHHHHHHHHHHST
T ss_pred HHHHHHHHhchhhccCCCcHHHHHHHhheeeeecCChHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999998 99999999999985
No 28
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=1.5e-61 Score=469.45 Aligned_cols=340 Identities=19% Similarity=0.317 Sum_probs=314.5
Q ss_pred HHHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhhhhhhh--c
Q 016808 40 VNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLI--S 117 (382)
Q Consensus 40 ~~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~--~ 117 (382)
.++|++|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++++..|. .+...+..+|+++|+++|++++. +
T Consensus 46 ~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~~~ 124 (439)
T 2c12_A 46 RPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSITIVATA-LGLMPVILCDSPSLQEKFLKPFISGE 124 (439)
T ss_dssp HHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHHHHHHHTTCCTTHHHHHHHH-HHHHHHHHSSCHHHHHHHTGGGGSSC
T ss_pred HHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHhH-HHHHHHHHhCCHHHHHHHHHHHhhcC
Confidence 38999999999999999999999999999999999999999999999887775 66778999999999999999999 6
Q ss_pred CCceeEEEecCCCCCC-----CcCCceeEEEEeCCeEEEEeEEEeecCCC-----CCcEEEEEEEe-C----CC----CC
Q 016808 118 GEHVGALAMSEPNAGS-----DVVGMKCKADRVDGGYIINGNKMWCTNGP-----VAQTLVVYAKT-D----IK----AG 178 (382)
Q Consensus 118 g~~~~~~~~te~~~gs-----d~~~~~~~a~~~~~g~~l~G~k~~vs~~~-----~a~~~lv~a~~-~----~~----~~ 178 (382)
|+.++|+++|||++|| |...+.|+|+++++||+|||+|.|+||+. .||+++|++++ + ++ ++
T Consensus 125 G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~~~g~~lnG~K~~is~~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~ 204 (439)
T 2c12_A 125 GEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDP 204 (439)
T ss_dssp SCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEETTEEEEEEEEECCTTTTTTTSSCCSEEEEEEEECSCTTSCCCTTSCG
T ss_pred CCEEEEEEecCCCCCCCccccccccceeEEEEcCCEEEEEeEEEeecCCCccccccCcEEEEEEEcCCcccCccccccCC
Confidence 9999999999999887 57778999999999999999999999997 99999999998 5 22 23
Q ss_pred CCCeEEEEEeCCCC------CeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHH-HHHhhhhHHHHHHHHHH
Q 016808 179 SKGITAFIIEKGMP------GFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVY-VMMSGLDLERLVLAAGP 251 (382)
Q Consensus 179 ~~~~~~flVp~~~~------gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~-~~~~~~~~~~~~~~a~~ 251 (382)
.+++++|+||++.| ||++.++|+++|++++++++|+||||+||++++||.++.|+. .....+...|+.+++.+
T Consensus 205 ~~g~~~flV~~~~pGv~~~~Gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~ 284 (439)
T 2c12_A 205 ATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMA 284 (439)
T ss_dssp GGGEEEEEECHHHHHTSCGGGEEEEECCCBSSCTTCCCCEEEEEEEEEEGGGBCSCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEECCCCcccCCCceEeCCcccccccCCCCceEEEEccEEecHHHcCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999988 788999999999999999999999999999999999998988 88888999999999999
Q ss_pred HHHHHHHHHHHHHHhhh-hhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC----hhhhhHHHHHHHH
Q 016808 252 LGIMQACLDVVLPYVRQ-REQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVD----PKDCAGVILCAAE 326 (382)
Q Consensus 252 ~G~~~~al~~~~~~~~~-r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~~~~ak~~~~~ 326 (382)
+|+++++++.+++|+++ |.+||+|+.++|.+|++|++|.+++++++++++.+++.++.+.+. ...++++|+++++
T Consensus 285 ~G~a~~al~~a~~ya~~rr~~~G~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~~~~aK~~a~~ 364 (439)
T 2c12_A 285 IGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTD 364 (439)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSSSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhceeeCCeehhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccchhhHHHHHHHHHHHHH
Confidence 99999999999999996 788999999999999999999999999999999999999877542 2357899999999
Q ss_pred HHHHHHHHHHHhhcCceecccchHHHHHHhhccCcccCChH-HHHHHHHHHHHHh
Q 016808 327 RATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTS-EIRRMIIGRALLK 380 (382)
Q Consensus 327 ~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g~~-~~~~~~l~~~l~~ 380 (382)
.+.++++.++|++||.||++++|++|+|||++...+++|++ ++++..+++.+..
T Consensus 365 ~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~G~~~~~~~~~i~~~l~~ 419 (439)
T 2c12_A 365 VAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVMAL 419 (439)
T ss_dssp HHHHHHHHHHHHHCGGGGBTTSSHHHHHHHHTTTTTSSSCTTTTHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCceEEcCCChHHHHHHhhhcceeecCChHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999988 7999999887654
No 29
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-61 Score=468.74 Aligned_cols=340 Identities=21% Similarity=0.328 Sum_probs=312.2
Q ss_pred cH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCc-hhhHHhhhhhHHHHHHHhcCCHHHHHhhhhhhh
Q 016808 39 DV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGS-VGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLI 116 (382)
Q Consensus 39 ~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~-~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~ 116 (382)
++ ++|+.+.+.||+++.+|+ |.|+++.+.+.++|++++++.+ .++....+...+...+..+|+++|+++|++++.
T Consensus 68 ~~~~~~~~l~~~Gl~~l~~P~---G~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~ 144 (428)
T 2wbi_A 68 VIDKLKEMAKVEGLWNLFLPA---VSGLSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLL 144 (428)
T ss_dssp HHHHHHHHHHHTTCCSTTCHH---HHCCCHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHH
T ss_pred cHHHHHHHHHHCCCCeecCCC---CCCCCHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHh
Confidence 55 899999999999999999 8899999999999999998743 333323332256678889999999999999999
Q ss_pred cCCceeEEEecCCC-CCCCcCCceeEEEEeCCeEEEEeEEEeecCCCC--CcEEEEEEEeCCCC--CCCCeEEEEEeCCC
Q 016808 117 SGEHVGALAMSEPN-AGSDVVGMKCKADRVDGGYIINGNKMWCTNGPV--AQTLVVYAKTDIKA--GSKGITAFIIEKGM 191 (382)
Q Consensus 117 ~g~~~~~~~~te~~-~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~--a~~~lv~a~~~~~~--~~~~~~~flVp~~~ 191 (382)
+|+.++|+++|||+ +|||...+.|+|++++|||+|||+|.|+||+.+ |||++|+|+++++. +.+++++|+||++.
T Consensus 145 ~G~~~~~~a~tEp~~aGsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~~~Ad~~~v~art~~~~~~~~~g~~~flV~~~~ 224 (428)
T 2wbi_A 145 QGNITSCFCMTEPDVASSDATNIECSIQRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNTSLSRHKQHSMILVPMNT 224 (428)
T ss_dssp HTSSEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCCTTSCGGGCEEEEEEETTS
T ss_pred CCCeEEEEEEecCCcCCCCcccceEEEEEeCCEEEEEeEEeccCCCCCCcCCEEEEEEEeCCccCCCCCceEEEEEECCC
Confidence 99999999999999 999999999999999999999999999999988 99999999986432 34578999999999
Q ss_pred CCeeeccccccccCCCCC---eeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016808 192 PGFSTAQKLDKLGMRGSD---TCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQ 268 (382)
Q Consensus 192 ~gv~~~~~~~~~G~~~~~---~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~ 268 (382)
|||++.++|+++|+++++ +++|.||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++
T Consensus 225 pGv~v~~~~~~~G~~~~~~~~~~~v~fddv~VP~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~ 304 (428)
T 2wbi_A 225 PGVKIIRPLSVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRGFEISQGRLGPGRIHHCMRTVGLAERALQIMCERATQ 304 (428)
T ss_dssp TTEEEEEECCBTTBCCGGGCCEEEEEEEEEEEEGGGBCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEecCCCCccccCCCCCCCeEEEEeCceEECHHHhcCCccchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999994 99999999999999999999999988888889999999999999999999999999999
Q ss_pred hhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C-CCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecc
Q 016808 269 REQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDN-G-KVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVN 346 (382)
Q Consensus 269 r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~-~-~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~ 346 (382)
|.+||+|+.++|.+|++|++|.+++++++++++.+++.++. + .+....++++|+++++.+.++++.++|++||.||++
T Consensus 305 R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~g~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~ 384 (428)
T 2wbi_A 305 RIAFKKKLYAHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLGSAGAKKEIAMIKVAAPRAVSKIVDWAIQVCGGAGVSQ 384 (428)
T ss_dssp CEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGST
T ss_pred CcccCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 99999999999999999999999999999999999999876 2 345677899999999999999999999999999999
Q ss_pred cchHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 016808 347 EYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 347 ~~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
+++++|+|||++...+++|++++++..+++.++++
T Consensus 385 ~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~ 419 (428)
T 2wbi_A 385 DYPLANMYAITRVLRLADGPDEVHLSAIATMELRD 419 (428)
T ss_dssp TSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhhcEecCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999863
No 30
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=8.1e-60 Score=451.78 Aligned_cols=338 Identities=22% Similarity=0.308 Sum_probs=299.7
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCC-CCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHH--HhcCCHHHH
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLG-LGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQL--VRHGSPAQK 108 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~-~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l--~~~g~~~~~ 108 (382)
.|+++.+| +.|+.|.+.||+++.+|++|||.| .++.+.+.++|+++++|+++++.+..|...+..++ ..+|+++||
T Consensus 34 ~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk 113 (395)
T 3mxl_A 34 RDRTGTFPVEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATALMRLAEADASTALAWHVQLSRGLTLTYEWQHGTPPVR 113 (395)
T ss_dssp HHHHTCCCHHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHH
T ss_pred HhhhCCCCHHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHH
Confidence 56678888 999999999999999999999999 99999999999999999999998887764444443 356999999
Q ss_pred ---HhhhhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEE
Q 016808 109 ---DKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAF 185 (382)
Q Consensus 109 ---~~~l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~f 185 (382)
++|++++.+|+.++++++|||++|+ .... +.++|||+|||+|.|+||+..|||++|+++++++++.+++++|
T Consensus 114 ~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~---t~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~~~~g~~~f 188 (395)
T 3mxl_A 114 AMAERLLRAMAEGEAAVCGALKDAPGVV--TELH---SDGAGGWLLSGRKVLVSMAPIATHFFVHAQRRDDDGSVFLAVP 188 (395)
T ss_dssp HHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEE---ECSSSCEEEEEEEEEETTGGGCSEECCCEEEECTTSCEEEECC
T ss_pred hHHHHHHHHHhcCCcEEEEEecCCCCCC--CceE---EecCCEEEEeeEEEEecCccccCEEEEEEEeCCCCCCCceEEE
Confidence 9999999999999999999998653 2222 2377889999999999999999999999999765556678999
Q ss_pred EEeCCCCCeeeccccccccCCCCCeeeEEecceeeCCCCccC--CCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 016808 186 IIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLG--QEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVL 263 (382)
Q Consensus 186 lVp~~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg--~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~ 263 (382)
+||++.|||++.+.|+++|++++++++|+||||+||+++++| .++.++..........++.+++.++|+++++++.++
T Consensus 189 lV~~~~pGv~v~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~ 268 (395)
T 3mxl_A 189 VVHRDAPGLTVLDNWDGLGMRASGTLEVVFDRCPVRADELLERGPVGARRDAVLAGQTVSSITMLGIYAGIAQAARDIAV 268 (395)
T ss_dssp CEETTCTTEEEECCCCBSSCTTSCCEEEEEEEEEECGGGCCEEEESSCCCTTHHHHHHHHHGGGHHHHHHHHHHHHHHHH
T ss_pred EEECCCCceEeCCCchhcCCCCCCcceEEEcceEcCHHHhcCCCCCCccHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 666665544444556888999999999999999999
Q ss_pred HHhhhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCC------hhhhhHHHHHHHHHHHHH
Q 016808 264 PYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDN------GKVD------PKDCAGVILCAAERATQV 331 (382)
Q Consensus 264 ~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~------~~~~------~~~~~~ak~~~~~~a~~~ 331 (382)
+|++ ++|+.++|.+|++|++|.+++++++++++++++..+. ..+. ...++++|+++++.+.++
T Consensus 269 ~~a~-----~r~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~~~~~~a~~~ 343 (395)
T 3mxl_A 269 GFCA-----GRGGEPRAGARALVAGLDTRLYALRTTVGAALTNADAASVDLSGDPDERGRRMMTPFQYAKMTVNELAPAV 343 (395)
T ss_dssp HHHH-----TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCccccchhHHHHHHHHHHHHHHHHHHH
Confidence 9999 4689999999999999999999999999999988764 1111 145678899999999999
Q ss_pred HHHHHHhhcCceecccchHHHHHHhhccCc-ccCChHHHHHHHHHHHHHh
Q 016808 332 TLQAIQCLGGNGYVNEYATGRLLRDAKLYE-IGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 332 ~~~~~~~~Gg~g~~~~~~l~r~~rda~~~~-~~~g~~~~~~~~l~~~l~~ 380 (382)
++.++|++||.||++++|++|+|||++..+ +++|+++++++.+++.+++
T Consensus 344 ~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~~g~~~~~~~~ia~~~Lg 393 (395)
T 3mxl_A 344 VDDCLSLVGGLAYTAGHPLSRLYRDVRAGGFMQPYSYVDAVDYLSGQALG 393 (395)
T ss_dssp HHHHHHHHCGGGGBTTSHHHHHHHHGGGGGGCSSCCHHHHHHHHHHHHSC
T ss_pred HHHHHHHhChHhccCCCcHHHHHHHHHhccccCCCCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999 9999999999999999875
No 31
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=4.5e-59 Score=446.43 Aligned_cols=332 Identities=18% Similarity=0.221 Sum_probs=300.8
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+.+.+| +.|++|++.||+++.+|++|||.|+++.+.+.++|+++++|+++++++..|. .+...+..+|+++|+++|
T Consensus 30 ~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~ 108 (394)
T 2rfq_A 30 TEDLRRIPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVSSIIG-VHNWHLALFSQQAQEDVW 108 (394)
T ss_dssp HHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHTTSCHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHHHHHH-HHHHHHHhCCHHHHHHHh
Confidence 45667888 9999999999999999999999999999999999999999999998877775 778889999999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCCC
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGM 191 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~~ 191 (382)
++ +|+.+++++++ | .++|++++|||+|||+|.|+||+.+||+++|+++++++++.+++++|+||++
T Consensus 109 l~---~g~~~~~~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~g~~~~~~~flV~~~- 174 (394)
T 2rfq_A 109 GN---DTDVRISSSYA-P---------MGAGQVVDGGYTVNGAWAWSSGCDHASWAVLGGPVIKDGRPVDFVSFLIPRE- 174 (394)
T ss_dssp SS---CTTCCEEEECS-C---------SEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEEETTEEEEEEEEEEEGG-
T ss_pred CC---CCCeEEEeccC-C---------CceEEEeCCeEEEeeeEeccCCCcccceEEEeeeecCCCCCCceeEEEEEhh-
Confidence 98 68888999987 3 5789999999999999999999999999999999842222337899999997
Q ss_pred CCeeeccccccccCCCCCeeeEEecceeeCCCCccCC--------CC----chHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 016808 192 PGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQ--------EG----KGVYVMMSGLDLERLVLAAGPLGIMQACL 259 (382)
Q Consensus 192 ~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~--------~~----~g~~~~~~~~~~~~~~~~a~~~G~~~~al 259 (382)
||++.+.|+++|++++++++|+||||+||++++|+. ++ .+.......+...++.+++.++|++++++
T Consensus 175 -gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r~~~aa~~~G~a~~al 253 (394)
T 2rfq_A 175 -DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKMPWGTIHPTTISAPIVGMAYGAY 253 (394)
T ss_dssp -GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGGGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hcEEeCCccccccccCCCCceEEcceEcChHHhcccccccccCCCCcccCCCccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 899998999999999999999999999999999975 22 23444455677889999999999999999
Q ss_pred HHHHHHhhhhh---ccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCC----hhhhhHHHHHHHHHH
Q 016808 260 DVVLPYVRQRE---QFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCD----NGKVD----PKDCAGVILCAAERA 328 (382)
Q Consensus 260 ~~~~~~~~~r~---~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~----~~~~~----~~~~~~ak~~~~~~a 328 (382)
+.+++|+++|. +||+|+.++|.+|++|++|.+++++++++++++++.++ .+.+. ...++++|+++++.+
T Consensus 254 ~~a~~ya~~R~~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~g~~~~~~~~~~~~~aK~~a~~~a 333 (394)
T 2rfq_A 254 DAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALLVAGEEVPFELRLRARRDQVRATGRA 333 (394)
T ss_dssp HHHHHHHHHHHHHSCTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999 99999999999999999999999999999999999998 66543 236789999999999
Q ss_pred HHHHHHHHHhhcCceecccchHHHHHHhhccCcccCC-hHHHHHHHHHHHHHh
Q 016808 329 TQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAG-TSEIRRMIIGRALLK 380 (382)
Q Consensus 329 ~~~~~~~~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g-~~~~~~~~l~~~l~~ 380 (382)
.++++.++|++||.||++++|++|+|||++...+++| ++++++..+++.+++
T Consensus 334 ~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~g~~~~~~~~~i~~~llg 386 (394)
T 2rfq_A 334 ISSIDKLFESSGATALANGTPLQRFWRDAHAGRVHAANDPERAYVMYGTGEFG 386 (394)
T ss_dssp HHHHHHHHHHHGGGGGBTTCHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhChhhhhcCCcHHHHHHHHHHHHcccccCchhHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999 999999999999986
No 32
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=4.7e-59 Score=448.78 Aligned_cols=332 Identities=17% Similarity=0.192 Sum_probs=300.0
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+.+.+| +.|++|++.||+++.+|++|||.|+++.+.+.++|+++++|+++++++..|. .+...+..+|+++|+++|
T Consensus 43 ~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~ 121 (414)
T 2or0_A 43 SEADCRLTDAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMGVAALDGASGWVTGIVG-VHPWELAFADPQVQEEIW 121 (414)
T ss_dssp HHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHT-THHHHHTTSCHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHH-HHHHHHHhCCHHHHHHHH
Confidence 45667888 9999999999999999999999999999999999999999999998887776 778889999999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCC---CeEEEEEe
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSK---GITAFIIE 188 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~---~~~~flVp 188 (382)
++ +|+.++++++| | .++|++++|||+|||+|.|+||+..|||++|+++++++++.+ ++++|+||
T Consensus 122 l~---~g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~g~~~~~g~~~flV~ 188 (414)
T 2or0_A 122 GE---DNDTWMASPYA-P---------MGVATPVDGGYVLKGRWSFSSGTDHCQWAFLGAMVGDGEGGIATPSSLHVILP 188 (414)
T ss_dssp SS---CTTCCEECCCS-C---------CEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEECC-----CCCSEEEEEEE
T ss_pred cc---CCCeEEEeccC-C---------CceeEEECCeEEEEeeEeccCCCchhhEEEEEEEecCCCCCcccceeEEEEEE
Confidence 98 69989998887 3 578999999999999999999999999999999987433333 78999999
Q ss_pred CCCCCeeec-cccccccCCCCCeeeEEecceeeCCCCccCCC--------C----chHHHHHhhhhHHHHHHHHHHHHHH
Q 016808 189 KGMPGFSTA-QKLDKLGMRGSDTCELVFENCFVPNENVLGQE--------G----KGVYVMMSGLDLERLVLAAGPLGIM 255 (382)
Q Consensus 189 ~~~~gv~~~-~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~--------~----~g~~~~~~~~~~~~~~~~a~~~G~~ 255 (382)
++ ||++. ++|+++|++++++++|.||||+||++++|+.. + .|+......+...|+.+++.++|++
T Consensus 189 ~~--gv~v~~~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r~~~aa~~lG~a 266 (414)
T 2or0_A 189 RT--DYQIVEDTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVMDGRAQKEAGRPEPLFNMPYSCMFPLGITAAVIGIT 266 (414)
T ss_dssp GG--GCEEETTCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHHSHHHHHHTCSCSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred hh--hcEEecCCCccccCcccCCCcEEEccEEecHHHeeccccccccCCCccccCCCccccccHHHHHHHHHHHHHHHHH
Confidence 97 89998 88999999999999999999999999999752 1 2333445567788999999999999
Q ss_pred HHHHHHHHHHhhhhhcc-CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCC----hhhhhHHHHHHHH
Q 016808 256 QACLDVVLPYVRQREQF-GRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCD----NGKVD----PKDCAGVILCAAE 326 (382)
Q Consensus 256 ~~al~~~~~~~~~r~~~-g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~----~~~~~----~~~~~~ak~~~~~ 326 (382)
+++++.+++|+++|.+| |+|+.++|.+|++|++|.+++++++++++.+++.++ .+.+. ...++++|+++++
T Consensus 267 ~~al~~a~~ya~~R~~f~G~~i~~~q~vq~~la~~~~~~~aar~l~~~aa~~~~~~~~~g~~~~~~~~~~~~~aK~~a~e 346 (414)
T 2or0_A 267 EGALACHIAVQKDRVAITGQKIKEDPYVLSAIGESAAEINASRVSLIETADRFYDKVDAGKEITFEERAIGRRTQIAAAW 346 (414)
T ss_dssp HHHHHHHHHHHTTCBCTTSCBGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999 999999999999999999999999999999999998 65543 2468899999999
Q ss_pred HHHHHHHHHHHhhcCceecccchHHHHHHhhccCcccCC-hHHHHHHHHHHHHHh
Q 016808 327 RATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAG-TSEIRRMIIGRALLK 380 (382)
Q Consensus 327 ~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g-~~~~~~~~l~~~l~~ 380 (382)
.+.++++.++|++||.||++++|++|+|||++...+++| ++++++..+++.+++
T Consensus 347 ~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~t~~~~~~~ia~~~lg 401 (414)
T 2or0_A 347 RAVRAADEIFARAGGGALHYKTPMQRFWRDAHAGLAHAVHVPGPTNHASALTQLG 401 (414)
T ss_dssp HHHHHHHHHHTTSCGGGGBTTSSHHHHHHHHHHHHTSGGGCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhChHhhccCCchhHHHHHHHHHHcCCcccchHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999 999999999999886
No 33
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=6.5e-59 Score=448.72 Aligned_cols=332 Identities=18% Similarity=0.221 Sum_probs=303.0
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhh
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKY 111 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~ 111 (382)
.|+.+.+| +.|++|.+.||+++.+|++|||.|+++.+.+.++|+++++|+++++.+..|. .+...+..+|+++|+++|
T Consensus 58 ~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~ 136 (422)
T 2jbr_A 58 AEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFSLLC-THSHQIAMFSKQLQDEIW 136 (422)
T ss_dssp HHHHTSCCHHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH-HHHHHHTTSCHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCcCHHHHHHHHH-HHHHHHHhCCHHHHHHHH
Confidence 45667888 9999999999999999999999999999999999999999999998877765 778889999999999999
Q ss_pred hhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEEEEeCCC
Q 016808 112 LPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGM 191 (382)
Q Consensus 112 l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~flVp~~~ 191 (382)
+++ |+.+++++++ | .++|++++|||+|||+|.|+||+.+||+++|+++++++++.+++++|+||++
T Consensus 137 l~~---g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~g~~g~~~flV~~~- 202 (422)
T 2jbr_A 137 LKD---PDATASSSIA-P---------FGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGFNRFDADGNKIYSFGVIPRS- 202 (422)
T ss_dssp TTC---TTCCEEEECS-C---------CSEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEECTTSCEEEEEEEEEGG-
T ss_pred ccC---CCeEEEeecC-C---------CeeEEEeCCEEEEeeeEeeecCCccccEEEEEEEecCCCCCceeEEEEEEcC-
Confidence 987 8888999887 3 4689999999999999999999999999999999865334457899999997
Q ss_pred CCeeeccccccccCCCCCeeeEEecceeeCCCCccCCC--------Cch-----HHHHHhhhhHHHHHHHHHHHHHHHHH
Q 016808 192 PGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQE--------GKG-----VYVMMSGLDLERLVLAAGPLGIMQAC 258 (382)
Q Consensus 192 ~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~--------~~g-----~~~~~~~~~~~~~~~~a~~~G~~~~a 258 (382)
||++.+.|+++|++++++++|+||||+||++++|+.. +.| +......+...|+.+++.++|+++++
T Consensus 203 -gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~~~g~~~g~g~~~~~~~~~~~~~~~~r~~~aa~~lG~a~~a 281 (422)
T 2jbr_A 203 -DYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPYRPYFASGFSAVSLGIAERM 281 (422)
T ss_dssp -GCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEEHHHHHHTCSTTTTSCTTCSSSSSCHHHHHTTHHHHHHHHHHHHH
T ss_pred -ceEEeCCccccCcCCCCCCcEEEeeEEecHHHeecccccccCCCCcccccCCCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 8999989999999999999999999999999999764 444 44455667788999999999999999
Q ss_pred HHHHHHHhhhhh--ccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCC----hhhhhHHHHHHHHHH
Q 016808 259 LDVVLPYVRQRE--QFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCD----NGKVD----PKDCAGVILCAAERA 328 (382)
Q Consensus 259 l~~~~~~~~~r~--~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~----~~~~~----~~~~~~ak~~~~~~a 328 (382)
++.+++|+++|. +||+|+.++|.+|++|++|.+++++++++++.+++.++ .+.+. ...++++|+++++.+
T Consensus 282 l~~a~~ya~~R~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~g~~~~~~~~~~~~~aK~~a~e~a 361 (422)
T 2jbr_A 282 IEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQYPNKETLAFWRTNQAYAVKMC 361 (422)
T ss_dssp HHHHHHHHTTCBCTTTCCBCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999998 99999999999999999999999999999999999998 65442 246889999999999
Q ss_pred HHHHHHHHHhhcCceecccchHHHHHHhhccCcccCChH-HHHHHHHHHHHHh
Q 016808 329 TQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTS-EIRRMIIGRALLK 380 (382)
Q Consensus 329 ~~~~~~~~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g~~-~~~~~~l~~~l~~ 380 (382)
.++++.++|++||.||+++++++|+|||++...+++|++ ++++..+++.+++
T Consensus 362 ~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~e~~~~~ia~~~lg 414 (422)
T 2jbr_A 362 IEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRELMG 414 (422)
T ss_dssp HHHHHHHHTTSCGGGGBTTCHHHHHHHHHHHHTSSTTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCHHhhhcCCcHHHHHHHHHHHhcCCccchhHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999 9999999999986
No 34
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=7.2e-58 Score=443.75 Aligned_cols=339 Identities=22% Similarity=0.327 Sum_probs=295.2
Q ss_pred ccccCCcH-HHHHHHHHcCCCCCCCCccCCCCC-CCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHH--HHhcCCHHH-
Q 016808 33 DDTQLQDV-NLWKLMGNFNLHGITAPQEYGGLG-LGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQ--LVRHGSPAQ- 107 (382)
Q Consensus 33 ~d~~~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~-~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~--l~~~g~~~~- 107 (382)
.|+++.++ +.|+.|++.||+++.+|++|||.| .++.+.+.++|++++.|+++++++..|......+ +..+|+++|
T Consensus 45 ~d~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~ 124 (439)
T 3m9v_A 45 HDRDGTFPTDTFDALRKDGLMGATVPAELGGLGVDRLYDVAVALLAVARADASTALALHMQLSRGLTLGYEWRHGDERAR 124 (439)
T ss_dssp HHHHTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred HHhcCCCCHHHHHHHHHCCCccCCCChhhCCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 46677888 999999999999999999999999 8999999999999999999998887775344443 346799999
Q ss_pred --HHhhhhhhhcCCceeEEEecCCCCCCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeEEE
Q 016808 108 --KDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAF 185 (382)
Q Consensus 108 --~~~~l~~l~~g~~~~~~~~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~~f 185 (382)
|++|++++.+|+.++|+++|||+++ ..... +.++|||+|||+|.|+||+.+|||++|+++++++.+.+++++|
T Consensus 125 ~~k~~~l~~l~~g~~~~~~a~tEp~~~--~~~~~---t~~~~g~vlnG~K~~~s~a~~Ad~~~v~art~~~~~~~g~~~f 199 (439)
T 3m9v_A 125 TLAERILRGMVAGDAVVCSGIKDHHTA--VTTLR---PDGAGGWLLSGRKTLVSMAPVGTHFVINARTDGTDGPPRLASP 199 (439)
T ss_dssp HHHHHHHHHHHHTCCCEEEECEECTTC--CCEEE---ECSSSCEEEEEEEEEETTGGGCSEEEECEEECC--CCCCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEeecCCCCC--CCcee---eccCCEEEEEeEEEeecCccccCEEEEEEEecCCCCCceeEEE
Confidence 9999999999999999999999853 22222 2377889999999999999999999999999765556689999
Q ss_pred EEeCCCCCeeeccccccccCCCCCeeeEEecceeeCCCCccC--CCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 016808 186 IIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLG--QEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVL 263 (382)
Q Consensus 186 lVp~~~~gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg--~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~ 263 (382)
+||++.|||++.++|+++|++++++++|+||||+||++++|+ ..+.++.........+++.+++.++|+++++++.++
T Consensus 200 lVp~~~pGv~i~~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~ 279 (439)
T 3m9v_A 200 VVTRDTPGFTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMRDPVGARNDAVLAGQTVSSVSVLGVYVGVAQAAYDTAV 279 (439)
T ss_dssp EEETTCTTEEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEECCC--CCCGGGHHHHHHHHGGGHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCeEECCCcccCCcCCCCceeEEEeeeEcCHHHccCCCCCCchHHHHhhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 666554433333455788899999999999999999
Q ss_pred HHhhhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------------CCChhhhhHHHHHHHHHHHHH
Q 016808 264 PYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNG------------KVDPKDCAGVILCAAERATQV 331 (382)
Q Consensus 264 ~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~------------~~~~~~~~~ak~~~~~~a~~~ 331 (382)
+|++ ++|+.++|.+|++|+++.++++++++++++++..++.. ......++++|+++++.+.++
T Consensus 280 ~~a~-----~r~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~~a~~~a~~v 354 (439)
T 3m9v_A 280 AALE-----RRPEPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADLSGDMDERGRQMMRHFQCAKLAVNRLAPEI 354 (439)
T ss_dssp HHHH-----TCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999 45899999999999999999999999999988776631 011234677899999999999
Q ss_pred HHHHHHhhcCceecccchHHHHHHhhccCc-ccCChHHHHHHHHHHHHHhc
Q 016808 332 TLQAIQCLGGNGYVNEYATGRLLRDAKLYE-IGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 332 ~~~~~~~~Gg~g~~~~~~l~r~~rda~~~~-~~~g~~~~~~~~l~~~l~~~ 381 (382)
++.++|++||.||+++++++|+|||++..+ +|+|+++++++.+++.++++
T Consensus 355 ~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~~~~~gt~~~~~~~i~~~~lg~ 405 (439)
T 3m9v_A 355 VSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAYVDAVDFLSAQALGI 405 (439)
T ss_dssp HHHHHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCHHHhcCCChHHHHHHHHHhhhhhCCCchHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999 99999999999999998874
No 35
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=3.1e-52 Score=410.09 Aligned_cols=327 Identities=23% Similarity=0.349 Sum_probs=295.1
Q ss_pred HHHHHHHHHcCCCCCCC--CccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhhhhhhhc
Q 016808 40 VNLWKLMGNFNLHGITA--PQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLIS 117 (382)
Q Consensus 40 ~~~~~~l~~~Gl~~~~v--P~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~ 117 (382)
.++++.+++.||+++.+ |++|||.+. .......++..++.......++. .+...|..+| ++|+++|+|++.+
T Consensus 89 ~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~----~~~~~~~~~~~~~~~~~p~~~t~-~~~~~L~~~g-~eqk~~~lp~l~s 162 (541)
T 3djl_A 89 HLLMQALCTNRVHNLAWEEDARSGAFVA----RAARFMLHAQVEAGSLCPITMTF-AATPLLLQML-PAPFQDWTTPLLS 162 (541)
T ss_dssp HHHHHHHHHTTTTTGGGSTTCCTTHHHH----HHHHHHHHHHHCSTTHHHHHHHH-HHHHHHHHHC-CGGGGGGHHHHTC
T ss_pred HHHHHHHHhCCcccCCCCCCCCCCcHHH----HHHHHHHHHHHHHhhhcHHHHHH-HHHHHHHHcC-HHHHHHHHHHHhC
Confidence 48899999999999999 789995433 33333344444555554445665 6777888899 9999999999999
Q ss_pred CCc-------------eeEEEecCCCCCCCcCCceeEEEEe-CCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCCCCeE
Q 016808 118 GEH-------------VGALAMSEPNAGSDVVGMKCKADRV-DGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGIT 183 (382)
Q Consensus 118 g~~-------------~~~~~~te~~~gsd~~~~~~~a~~~-~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~~~~~ 183 (382)
|+. ++|+++|||++|||+...+|+|+++ +|||+|||+|.|+| +..+||++|+|+++ ++++
T Consensus 163 ge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~~Ad~~lVlArt~-----~Gis 236 (541)
T 3djl_A 163 DRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VPQSDAHLVLAQTA-----GGLS 236 (541)
T ss_dssp SCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CTTSSEEEEEEEET-----TEEE
T ss_pred CCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-ccccCEEEEEEEEC-----CceE
Confidence 998 7899999999999999999999999 78899999999999 89999999999996 3789
Q ss_pred EEEEeCCCC-----CeeeccccccccCCCCCeeeEEecceeeCCCCccCCCCchHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 016808 184 AFIIEKGMP-----GFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQAC 258 (382)
Q Consensus 184 ~flVp~~~~-----gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~vlg~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a 258 (382)
+|+||++.| ||++.+.|+++|++++++++|+|+||+ ++++|.++.|+......+...|+..++.++|+++++
T Consensus 237 ~flVp~~~p~~~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~---~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~a 313 (541)
T 3djl_A 237 CFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAI---GWLLGLEGEGIRLILKMGGMTRFDCALGSHAMMRRA 313 (541)
T ss_dssp EEEEESBCTTSCBCSEEEEEECCCSSCTTSCEEEEEEEEEE---EEEESSTTCHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCcCCeEEeeccccCCCcCCceeEEEEccce---eeeeecCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 999999999999999999999999996 889999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC------hhhhhHHHHHHHHHHHHHH
Q 016808 259 LDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVD------PKDCAGVILCAAERATQVT 332 (382)
Q Consensus 259 l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~------~~~~~~ak~~~~~~a~~~~ 332 (382)
++.+++|+++|.+||+|+.++|.+|++|+++.++++++++++++++..++...+. ...++++|+++++.+.+++
T Consensus 314 l~~a~~ya~~R~~fG~~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~~~~~~aK~~ase~a~~~~ 393 (541)
T 3djl_A 314 FSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPFV 393 (541)
T ss_dssp HHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCccCCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999886432 2346789999999999999
Q ss_pred HHHHHhhcCceecccchHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 016808 333 LQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 333 ~~~~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
+.+++++||.||.++++++|+|||++..++++|++++++..+++.+++.
T Consensus 394 ~~a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ei~~~~i~r~l~~~ 442 (541)
T 3djl_A 394 AEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQ 442 (541)
T ss_dssp HHHHHHHGGGGGSTTSHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhCCeeecCCCcHHHHHHhhhhhheeCCcHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999998764
No 36
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=1.6e-51 Score=414.99 Aligned_cols=335 Identities=18% Similarity=0.209 Sum_probs=294.6
Q ss_pred CCcH-HHHHHHHHcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhhhhhh
Q 016808 37 LQDV-NLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKL 115 (382)
Q Consensus 37 ~~~~-~~~~~l~~~Gl~~~~vP~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l 115 (382)
..++ +.|+.+++.|++.. +|++|| .+..+...+.+++ +.+++ +..|..++...|..+|+++|+++|++++
T Consensus 56 ~~~~~~~~~~l~~~g~l~~-~p~e~G---~~~~~~~~v~e~~---~~~~~--~~~~~~l~~~~l~~~Gt~eqk~~~L~~i 126 (659)
T 1w07_A 56 LSRKELFKSTLRKCAHAFK-RIIELR---LNEEEAGRLRHFI---DQPAY--VDLHWGMFVPAIKGQGTEEQQKKWLSLA 126 (659)
T ss_dssp SCHHHHHHHHHHHHHHHHH-HHHHTT---CCHHHHHHHHHHH---CCCCH--HHHHHHTHHHHHHHHSCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHH-hHHHhC---CCchHHHHHHHHh---ccchh--hhhHHhHHHHHHHHcCCHHHHHHHhhHH
Confidence 3566 89999999888874 788898 3566766665555 45555 5566557778899999999999999999
Q ss_pred hcCCceeEEEecCCCCCCCcCCceeEEEEe--CCeEEEE-----eEEEeecC-CCCCcEEEEEEEeCCCCCCCCeEEEEE
Q 016808 116 ISGEHVGALAMSEPNAGSDVVGMKCKADRV--DGGYIIN-----GNKMWCTN-GPVAQTLVVYAKTDIKAGSKGITAFII 187 (382)
Q Consensus 116 ~~g~~~~~~~~te~~~gsd~~~~~~~a~~~--~~g~~l~-----G~k~~vs~-~~~a~~~lv~a~~~~~~~~~~~~~flV 187 (382)
.+|+.++|+++|||++|||...+.|+|+++ ++||+|| |+|.|+|| +..|||++|+|+++++++..++.+|+|
T Consensus 127 ~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~Ad~~lV~Ar~~~~~~~~G~~~flV 206 (659)
T 1w07_A 127 NKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIV 206 (659)
T ss_dssp HTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEE
T ss_pred hcCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCeEEEeecCCCCCCCEEEEEEEECCCCCCCCeEEEEE
Confidence 999999999999999999999999999998 6889999 99999999 899999999999865433457899999
Q ss_pred eC-C------CCCeeecccccccc---CCCCCeeeEEecceeeCCCCccCC------CCchH------HHHHhhhhHHHH
Q 016808 188 EK-G------MPGFSTAQKLDKLG---MRGSDTCELVFENCFVPNENVLGQ------EGKGV------YVMMSGLDLERL 245 (382)
Q Consensus 188 p~-~------~~gv~~~~~~~~~G---~~~~~~~~v~f~~v~Vp~~~vlg~------~~~g~------~~~~~~~~~~~~ 245 (382)
|. + .|||++.+.|+++| +++++++.|.||||+||.+++|+. .+.++ ......+..+|+
T Consensus 207 p~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~~v~fd~VrVP~~~lLg~~~~v~~~g~~~~~~~~~~~~~~~l~~~R~ 286 (659)
T 1w07_A 207 QLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQ 286 (659)
T ss_dssp ECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESSEEEEGGGBCCSSEEECTTCCEEECSSCGGGCTTTTTHHHH
T ss_pred EccccCCCCCCCCeEEecCccCccccccCCCCceEEEeccEEECHHHhcCCcCccCCCCceecCCccHHHHHHHHHHHHH
Confidence 95 5 69999999999999 999999999999999999999985 44432 234556788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCC-------CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCC
Q 016808 246 VLAAGPLGIMQACLDVVLPYVRQREQFGR-------PLGEFQFIQGKTADMYTALQSSRSYVYSVARDC-------DNGK 311 (382)
Q Consensus 246 ~~~a~~~G~~~~al~~~~~~~~~r~~~g~-------~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~-------~~~~ 311 (382)
.+++.++|+++++++.+++|++.|.+||. |+.++|.+|++|+++.+.+++++++.+.++..+ +.+.
T Consensus 287 ~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~pi~~~q~vq~rLa~~~a~~~a~~~~~~~aa~~~~~~~~~~~~g~ 366 (659)
T 1w07_A 287 TIVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASD 366 (659)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCBCSCC---CCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCcccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 99999999999999999999999999998 899999999999999999999999999988765 3333
Q ss_pred C-----ChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchHHHHHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 312 V-----DPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 312 ~-----~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
+ ....++++|.++++.+.++++.|+|+|||.||+.+++++|+|||++...+++|++++++.++++.+++
T Consensus 367 ~~~~~~~~~~~a~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~v~~~~iar~lL~ 440 (659)
T 1w07_A 367 FATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMK 440 (659)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGBGGGSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCHHHHHHhcceeEEEeCChHHHHHHHHHHHHH
Confidence 2 24567899999999999999999999999999999999999999999999999999999999999886
No 37
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=1.3e-48 Score=393.21 Aligned_cols=318 Identities=18% Similarity=0.200 Sum_probs=273.9
Q ss_pred ccCCCCCCCHHHHHHHHHHHHhccCchhhHHhhhhhHHHHHHHhcCCHHHHHhhhhhhhcCCceeEEEecCCCCCCCcCC
Q 016808 58 QEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVG 137 (382)
Q Consensus 58 ~~~GG~~~~~~~~~~~~~~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~~~~~~te~~~gsd~~~ 137 (382)
++|||.+ ..+. .+.+++...+ ++..+..|..++...|..+|+++|+++|++++.+|+.++|+++|||++|||+..
T Consensus 75 ~~~~~~~--~~~~-~~~~~~~~~~--~~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~ 149 (661)
T 2ddh_A 75 REYGISD--PEEI-MWFKNSVHRG--HPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRG 149 (661)
T ss_dssp HHTTCCC--HHHH-HHHHHHHHTT--CCCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGG
T ss_pred HHcCCCC--chHH-HHHHHHhccc--hhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCccc
Confidence 6788765 3333 3366665433 344456676577889999999999999999999999999999999999999999
Q ss_pred ceeEEEEe--CCeEEEE-----eEEEeecC-CCCCcEEEEEEEeCCCCCCCCeEEEEEeC-C------CCCeeecccccc
Q 016808 138 MKCKADRV--DGGYIIN-----GNKMWCTN-GPVAQTLVVYAKTDIKAGSKGITAFIIEK-G------MPGFSTAQKLDK 202 (382)
Q Consensus 138 ~~~~a~~~--~~g~~l~-----G~k~~vs~-~~~a~~~lv~a~~~~~~~~~~~~~flVp~-~------~~gv~~~~~~~~ 202 (382)
++|+|+++ ++||+|| |+|.|+|| +..|||++|+|++..+++..++.+|+||. + .|||++.+.|++
T Consensus 150 l~TtA~~d~~~~~~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~~~~~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k 229 (661)
T 2ddh_A 150 LETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPK 229 (661)
T ss_dssp CCCEEEEETTTTEEEEECCSSTTSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCC
T ss_pred ceeEEEEcCCCCeEEEcCCCCCeEEEecCCCcccCCEEEEEEEEccCCCCCceEEEEEecccccCCCCCCCeEEecCccc
Confidence 99999999 7889999 99999999 88999999999986443445789999995 4 799999999999
Q ss_pred ccCCCCCeeeEEecceeeCCCCccCCC------Cch-----HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 016808 203 LGMRGSDTCELVFENCFVPNENVLGQE------GKG-----VYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQ 271 (382)
Q Consensus 203 ~G~~~~~~~~v~f~~v~Vp~~~vlg~~------~~g-----~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~ 271 (382)
+|+++++++.|.||||+||.+++|+.. +.+ .......+..+|+.+++.++|+++++++.+++|++.|.+
T Consensus 230 ~Gl~g~~~~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~q 309 (661)
T 2ddh_A 230 FGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQ 309 (661)
T ss_dssp SSCTTCCCEEEEESSEEEEGGGBCCSSCEECTTCCEECCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBC
T ss_pred ccCCCCcceEEEeccEEECHHHhcCcccccCCCCceeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc
Confidence 999999999999999999999999874 322 455666778899999999999999999999999999999
Q ss_pred cCC-------CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCC-----ChhhhhHHHHHHHHHHHHHH
Q 016808 272 FGR-------PLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDN-------GKV-----DPKDCAGVILCAAERATQVT 332 (382)
Q Consensus 272 ~g~-------~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~-------~~~-----~~~~~~~ak~~~~~~a~~~~ 332 (382)
||. |+.++|.+|++|+++.+++++++.+++.++..++. +.+ ....++++|.++++.+.+++
T Consensus 310 fg~~~~~~e~~i~~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~ 389 (661)
T 2ddh_A 310 SEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGI 389 (661)
T ss_dssp SCSSTTSCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 998 89999999999999999999999999999988753 221 23467899999999999999
Q ss_pred HHHHHhhcCceecccchHHHHHHhhccCcccCChHHHHHHHHHHHHHh
Q 016808 333 LQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLK 380 (382)
Q Consensus 333 ~~~~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g~~~~~~~~l~~~l~~ 380 (382)
+.|+++|||.||+.+++++|+|||++...+++|++++++.++++.+++
T Consensus 390 ~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~vl~~~iar~lL~ 437 (661)
T 2ddh_A 390 EECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMK 437 (661)
T ss_dssp HHHHHHTTHHHHSGGGSHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcccccccCcHHHHHHhcceeeEecCchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999886
No 38
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.6e-38 Score=309.16 Aligned_cols=253 Identities=13% Similarity=0.140 Sum_probs=207.1
Q ss_pred HHHHhcCC--HHHHHhhhhhhhcCCceeEEEecCCCCC--------CCc-CCceeEEEEeCCeEEEEeEEEeecCCCCCc
Q 016808 97 NQLVRHGS--PAQKDKYLPKLISGEHVGALAMSEPNAG--------SDV-VGMKCKADRVDGGYIINGNKMWCTNGPVAQ 165 (382)
Q Consensus 97 ~~l~~~g~--~~~~~~~l~~l~~g~~~~~~~~te~~~g--------sd~-~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~ 165 (382)
.++..+|+ ++|+++||+++++|+.++|+++|||..| ||+ ...+ ++++++|||+|||+|.|+||+..||
T Consensus 118 ~~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad 196 (490)
T 1u8v_A 118 EIDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSH 196 (490)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCS
T ss_pred hHHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccC
Confidence 34568999 9999999999999999999999999864 664 3344 8889999999999999999999999
Q ss_pred EEEEEEEeCCC-CCCCCeEEEEEeCCCCCeeecc---cccc----------ccC-CC-CCeeeEEecceeeCCCCcc--C
Q 016808 166 TLVVYAKTDIK-AGSKGITAFIIEKGMPGFSTAQ---KLDK----------LGM-RG-SDTCELVFENCFVPNENVL--G 227 (382)
Q Consensus 166 ~~lv~a~~~~~-~~~~~~~~flVp~~~~gv~~~~---~~~~----------~G~-~~-~~~~~v~f~~v~Vp~~~vl--g 227 (382)
+++|+++++.. ++...+++|+||+++|||++.+ .++. +|+ +. .++++|.||||+||++++| |
T Consensus 197 ~~iV~art~~~~~~~~~~s~flVp~d~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~g 276 (490)
T 1u8v_A 197 EHIIMPTIAMTEADKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLCQ 276 (490)
T ss_dssp EEEECCSSCCCGGGGGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEES
T ss_pred EEEEEEecCCCCCCCCeEEEEEEECCCCCEEEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHccCCC
Confidence 99999998532 1233578999999999999953 4443 666 63 6778899999999999998 7
Q ss_pred CCCchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016808 228 QEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDC 307 (382)
Q Consensus 228 ~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~ 307 (382)
..+.++......+...|...+++++|.++.++..+...... + ++.++|.+|++|++|.+.+++++++++++++..
T Consensus 277 ~~~~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~~---~--gi~~~q~vq~~laem~~~leaar~l~~~aa~~~ 351 (490)
T 1u8v_A 277 EYDFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAADY---N--GAQKASHVKDKLIEMTHLNETLYCCGIACSAEG 351 (490)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H--TCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c--CchhcHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 77777777677777788777776666666666655544332 3 388999999999999999999999999999998
Q ss_pred cC---CC--CChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchHHHHHHhh
Q 016808 308 DN---GK--VDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDA 357 (382)
Q Consensus 308 ~~---~~--~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rda 357 (382)
+. +. +...+++++|+++++.+.++++.++|++||.+++ +|.+++|||.
T Consensus 352 d~~~~g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~er~~rd~ 404 (490)
T 1u8v_A 352 YPTAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGGLMVT--MPSEADFKSE 404 (490)
T ss_dssp EECTTSCEECCHHHHHHHHHHHTTHHHHHHHHHHHHHCTHHHH--CCCHHHHTCC
T ss_pred cccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhc--ChHHHHHhCc
Confidence 74 32 4466789999999999999999999999999997 5666666665
No 39
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=7.5e-38 Score=303.97 Aligned_cols=265 Identities=17% Similarity=0.212 Sum_probs=220.0
Q ss_pred CHHHHHhhhhhhhcCCceeEEEecCCCCC--------CCcCCceeEE-EEeCCeEEEEeEEEeecCCCCCcEEEEEEEeC
Q 016808 104 SPAQKDKYLPKLISGEHVGALAMSEPNAG--------SDVVGMKCKA-DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 174 (382)
Q Consensus 104 ~~~~~~~~l~~l~~g~~~~~~~~te~~~g--------sd~~~~~~~a-~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~ 174 (382)
.++|+++||+++++|+.++++++|||+.| ||+. ..+++ ++++|||+|||+|.|+|| +.||+++|+++++
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~ 199 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSIL 199 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSC
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecC
Confidence 36999999999999999999999999876 5654 44555 478999999999999999 9999999999986
Q ss_pred CC-CCCCCeEEEEEeCCCCCeeec--ccccc--------ccCCC-CCeeeEEecceeeCCCCcc--CCCCchHHHH--Hh
Q 016808 175 IK-AGSKGITAFIIEKGMPGFSTA--QKLDK--------LGMRG-SDTCELVFENCFVPNENVL--GQEGKGVYVM--MS 238 (382)
Q Consensus 175 ~~-~~~~~~~~flVp~~~~gv~~~--~~~~~--------~G~~~-~~~~~v~f~~v~Vp~~~vl--g~~~~g~~~~--~~ 238 (382)
.. ++..++++|+||+++|||++. +.+.. +|++. .++++|.||||+||++++| |..+.++... ..
T Consensus 200 ~~~~~~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~~ 279 (481)
T 2yyk_A 200 LQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGATG 279 (481)
T ss_dssp CCTTCGGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHHhh
Confidence 32 223458899999999999994 33332 56664 7788999999999999998 6665554433 56
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CC--CC
Q 016808 239 GLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDN---GK--VD 313 (382)
Q Consensus 239 ~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~---~~--~~ 313 (382)
.+..+|+..++..+|.++.++..+..++.. + ++.++|.+|++|++|.+++++++++++++++..+. +. +.
T Consensus 280 ~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~--gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~G~~~~~ 354 (481)
T 2yyk_A 280 ALNHMAHQVVALKTAKTEAFLGVAALMAEG---I--GADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPD 354 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T--TGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEECC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHh---c--ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCcCcc
Confidence 678899999999999999999999888774 3 48999999999999999999999999999999874 32 44
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchHHHHHHhhccCc------ccCChHHHHHHHHHHHH
Q 016808 314 PKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYE------IGAGTSEIRRMIIGRAL 378 (382)
Q Consensus 314 ~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rda~~~~------~~~g~~~~~~~~l~~~l 378 (382)
..+++++|+++++.+.++++.++|++||.+++ .|++++| |..... ...|++++++..++|.+
T Consensus 355 ~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~e~~~-~~~i~~~l~~~l~~~g~~~~~r~~i~rl~ 422 (481)
T 2yyk_A 355 RGALDGARNLYPRLYPRIREILEQIGASGLIT--LPSEKDF-KGPLGPFLEKFLQGAALEAKERVALFRLA 422 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC--CCCHHHH-HSTTHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccccc--CccHHHh-ChhhhHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 66899999999999999999999999998776 8888888 884322 22489999999888754
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=100.00 E-value=4.3e-33 Score=270.16 Aligned_cols=238 Identities=13% Similarity=0.143 Sum_probs=185.8
Q ss_pred cCC--HHHHHhhhhhhhcCCceeEEEecCCCC--------CCCcCCceeEEEEeCCeEEEEeEEEeecCCCCCcEEEEEE
Q 016808 102 HGS--PAQKDKYLPKLISGEHVGALAMSEPNA--------GSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYA 171 (382)
Q Consensus 102 ~g~--~~~~~~~l~~l~~g~~~~~~~~te~~~--------gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a 171 (382)
+|+ .+|+++|++++++|+.++++++|||+. |||+ ..+++ .+++|||+|||+|.|+||+..||+++|++
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~~-~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a 204 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRIV-EKTDDGIIVNGVKAVGTGIAFGDYMHIGC 204 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEEE-EECSSEEEEEEEEEEEESGGGCSEEEECC
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEEE-EEECCEEEEEEEEEEECCccccCEEEEEE
Confidence 555 588999999999999999999999986 4676 44443 45689999999999999999999999999
Q ss_pred EeCC-CCCCCCeEEEEEeCCCCCeeeccccccccC-----CC-----CCeeeEEecceeeCCCCcc--CCCCchHHHHHh
Q 016808 172 KTDI-KAGSKGITAFIIEKGMPGFSTAQKLDKLGM-----RG-----SDTCELVFENCFVPNENVL--GQEGKGVYVMMS 238 (382)
Q Consensus 172 ~~~~-~~~~~~~~~flVp~~~~gv~~~~~~~~~G~-----~~-----~~~~~v~f~~v~Vp~~~vl--g~~~~g~~~~~~ 238 (382)
++++ .++.. +++|+||++.|||++...|...|. +. ..+++|.||||+||++++| |..+.++..++.
T Consensus 205 ~t~~~~~~~~-~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~ 283 (515)
T 3hwc_A 205 LYRPGIPGEQ-VIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQR 283 (515)
T ss_dssp CCCTTCCGGG-CEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHH
T ss_pred EecCCCCCCe-EEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHH
Confidence 9832 22333 899999999999999776766662 22 3378999999999999999 888888765533
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CC--CC
Q 016808 239 GLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDN---GK--VD 313 (382)
Q Consensus 239 ~~~~~~~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~---~~--~~ 313 (382)
.+...+....+..+|.+..++..+..++.. + +|.++|.||++|++|.+.+++++++++++++..+. +. +.
T Consensus 284 ~~~~~~r~~~~~~~~~a~~~lG~A~~~~e~---~--gI~~fQ~Vq~kLAem~~~lEaaR~l~~~Aa~~~d~~~~G~~~p~ 358 (515)
T 3hwc_A 284 IFDWVHYHILIRQVLRAELIVGLAILITEH---I--GTSKLPTVSARVAKLVAFHLAMQAHLIASEETGFHTKGGRYKPN 358 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H--TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---c--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Confidence 332222111233344445455444444332 3 38999999999999999999999999999999874 32 55
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhcCceeccc
Q 016808 314 PKDCAGVILCAAERATQVTLQAIQCLGGNGYVNE 347 (382)
Q Consensus 314 ~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~ 347 (382)
...++++|+++++.+.++++.++|++||.+++..
T Consensus 359 ~~~as~AK~~ase~~~rv~~~a~qi~GG~~i~~P 392 (515)
T 3hwc_A 359 PLIYDFGRAHFLQNQMSVMYELLDLAGRSSLMIP 392 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCC
Confidence 6779999999999999999999999999998754
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.96 E-value=2.9e-28 Score=236.77 Aligned_cols=244 Identities=12% Similarity=0.046 Sum_probs=195.4
Q ss_pred HHHHhhhhhhhcCCceeEEEecCCCCCCC-----cCCcee-EEEEeCCeEEEEeEEEeecCCCCCcEEEEEEEeCCCCCC
Q 016808 106 AQKDKYLPKLISGEHVGALAMSEPNAGSD-----VVGMKC-KADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS 179 (382)
Q Consensus 106 ~~~~~~l~~l~~g~~~~~~~~te~~~gsd-----~~~~~~-~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~~~~ 179 (382)
+...+|+..+.+++...+.++++|..... ...+.. ..+++++||+|||.|.|+||++.||+++|++++.+..+.
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~~~ 213 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGIPG 213 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTCCG
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCCCc
Confidence 55678999999999999999999963211 111112 356678999999999999999999999999998766555
Q ss_pred CCeEEEEEeCCCCCeeecccccccc---------CCCC-CeeeEEecceeeCCCCcc--CCCCchHHHHHhhhhHHHHHH
Q 016808 180 KGITAFIIEKGMPGFSTAQKLDKLG---------MRGS-DTCELVFENCFVPNENVL--GQEGKGVYVMMSGLDLERLVL 247 (382)
Q Consensus 180 ~~~~~flVp~~~~gv~~~~~~~~~G---------~~~~-~~~~v~f~~v~Vp~~~vl--g~~~~g~~~~~~~~~~~~~~~ 247 (382)
++.+.|+||.++|||++.......+ .++. ..+.|.||||+||+++|| |+++.+.......+...+...
T Consensus 214 d~~~~F~VP~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~~~~ 293 (517)
T 4g5e_A 214 DQIIFAATPVNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLHYHA 293 (517)
T ss_dssp GGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEecCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHHHHHHHH
Confidence 6788999999999999854333332 2222 247799999999999987 888888777777888888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CCChhhhhHHHH
Q 016808 248 AAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNG-----KVDPKDCAGVIL 322 (382)
Q Consensus 248 ~a~~~G~~~~al~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~ak~ 322 (382)
++..+|.++.++..+..+++.. | +.++|.||++|++|...+|+++++++.++...... .|....+.++|.
T Consensus 294 ~~~~~~~~~~~~g~a~~~ae~~---G--i~~fq~Vq~kLaEm~~~~E~~ral~~aaa~~a~~~~~G~~~P~~~~a~~aK~ 368 (517)
T 4g5e_A 294 LIRQSVRAELMAGLAILITEHI---G--TNKIPAVQTRVAKLIGFHQAMLAHIVASEELGFHTPGGAYKPNILIYDFGRA 368 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---T--CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---C--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcCcCHHHHHHHHH
Confidence 8888998998988888887643 3 88999999999999999999999999988765432 256778899999
Q ss_pred HHHHHHHHHHHHHHHhhcCceecccchHHHHHHh
Q 016808 323 CAAERATQVTLQAIQCLGGNGYVNEYATGRLLRD 356 (382)
Q Consensus 323 ~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd 356 (382)
++++...+++++++|++||.+++- |-++-|+|
T Consensus 369 ~a~~~~~rv~~eaiqi~GG~g~~~--Pse~d~~~ 400 (517)
T 4g5e_A 369 LYLENFSQMIYELVDLSGRSALIF--ASEDQWND 400 (517)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTTCC--CCHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhCCccccC--CCHHHhcC
Confidence 999999999999999999999973 43444444
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=94.73 E-value=0.28 Score=48.49 Aligned_cols=120 Identities=16% Similarity=0.104 Sum_probs=90.6
Q ss_pred HHHHHHHHHhhhhhccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCC-ChhhhhHHHHHHHHHHHHHHHH
Q 016808 257 ACLDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDN-GKV-DPKDCAGVILCAAERATQVTLQ 334 (382)
Q Consensus 257 ~al~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~-~~~-~~~~~~~ak~~~~~~a~~~~~~ 334 (382)
..+..++.++-.| +|+.+.+.|.+..+|+++.+++++|.+.+.++...+.. +.+ ...+..++++|+.+...++-..
T Consensus 469 ~~~~~~~~~~~~~--~~~~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
T 3owa_A 469 KIGLMVAGLAAQK--YGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEAH 546 (597)
T ss_dssp HHHHHHHHHHHHH--HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--hCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444433 46788999999999999999999999999999888764 543 4677889999999999999999
Q ss_pred HHHhhcCceecccchHHHHHHhhccCcccCCh-HHHHHHHHHHHHHh
Q 016808 335 AIQCLGGNGYVNEYATGRLLRDAKLYEIGAGT-SEIRRMIIGRALLK 380 (382)
Q Consensus 335 ~~~~~Gg~g~~~~~~l~r~~rda~~~~~~~g~-~~~~~~~l~~~l~~ 380 (382)
+.++. .++.++..+..++..++-+.-+... ....+..|++.+..
T Consensus 547 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 591 (597)
T 3owa_A 547 AKETL--IAVENGDMLRMMLSSLRKLTRHTPLNVIPKKREIAAKILE 591 (597)
T ss_dssp HHHHH--HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHH--HhhccchHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHH
Confidence 99988 5666666677777777666555553 35666788877764
No 43
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=81.33 E-value=35 Score=33.21 Aligned_cols=101 Identities=18% Similarity=0.125 Sum_probs=71.9
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhcCceecccchHHH
Q 016808 273 GRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGR 352 (382)
Q Consensus 273 g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r 352 (382)
|..+.+.+.+..+++++...+..+++.+.++... .+. +..++++++.+...++-..+.+++- ++.++.|.-.
T Consensus 469 ~~~l~~~q~~l~~lad~~~~~~~~~~~l~r~~~~--~~~----~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 540 (577)
T 2z1q_A 469 GQGVEEEQEVLGAVADILIDAYAAESALLRARRL--GGL----APVLARIYLAQALDRAQAGALSVLP--RLVEGDEARV 540 (577)
T ss_dssp GGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH--CTT----HHHHHHHHHHHHHHHHHHHHHHHGG--GTCCTTTTHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCc----HHHHHHHHHHHHHHHHHHHHHHHHH--HHHcCCchhH
Confidence 4556677899999999999999999999888766 222 7888999999999998888777763 3344444333
Q ss_pred HHHhhcc-CcccCChHHHHHHHHHHHHHhc
Q 016808 353 LLRDAKL-YEIGAGTSEIRRMIIGRALLKQ 381 (382)
Q Consensus 353 ~~rda~~-~~~~~g~~~~~~~~l~~~l~~~ 381 (382)
+....+. ......+++.+...+++.+...
T Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~ 570 (577)
T 2z1q_A 541 VYSAARRLTKREPGDLVALRRQAAEAVLEA 570 (577)
T ss_dssp HHHHHHHHTCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCChHHHHHHHHHHHHhc
Confidence 2222222 2344557778888899888764
No 44
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=79.52 E-value=25 Score=34.59 Aligned_cols=70 Identities=13% Similarity=0.043 Sum_probs=57.1
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-hhhhhHHHHHHHHHHHHHHHHHHHhhcC
Q 016808 272 FGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVD-PKDCAGVILCAAERATQVTLQAIQCLGG 341 (382)
Q Consensus 272 ~g~~i~~~~~v~~~la~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~ak~~~~~~a~~~~~~~~~~~Gg 341 (382)
.|..+.+.+.+..+|+++...++++.+.+.++.+.++.+.+. ..+..+++.++.+...++-..+.++..+
T Consensus 506 ~~~~~~~~~~~~~rl~d~~~~~y~~~~~l~r~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 576 (607)
T 2uxw_A 506 HKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQSD 576 (607)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 456788899999999999999999999999988777666543 3567889999999888888888885543
Done!