BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016813
(382 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXA7|GTE2_ARATH Transcription factor GTE2 OS=Arabidopsis thaliana GN=GTE2 PE=2 SV=2
Length = 581
Score = 291 bits (744), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 169/381 (44%), Positives = 215/381 (56%), Gaps = 73/381 (19%)
Query: 1 MKNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
M CGQIL KLMKHK ++F +PVDVVG+ LHDY+ I+ PMDLGTVK L K LY SP
Sbjct: 175 MTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPI 234
Query: 61 SFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQERVLDDEFP 120
FA+DVRLTF NAM+YNPK +V+++AE+ L++F+ F P ++
Sbjct: 235 DFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFDVWFNPTLKRF--------------- 279
Query: 121 AHSWNFHEVKEKEVVKQQPLPKPEPMQRVLATGS-NHNPKPNPPPAAAAPQM-------- 171
E +E +V+ P PE QRV + N + P + A ++
Sbjct: 280 -------EAQEVKVMGSSSRPGPEDNQRVWNQNNVAENARKGPEQISIAKKLDSVKPLLP 332
Query: 172 -----------------------------------PVRTPSPVRVTPAVKPLKQPKPKAK 196
V VR T + K PKPKAK
Sbjct: 333 TLPPPPVIEITRDPSPPPSPVQPPPPPSPPPQPVNQVEASLEVRETNKGRKGKLPKPKAK 392
Query: 197 DPNKREMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLRQDEDEIELDIEALDTETL 256
DPNKREM+M+EK KLG+ LQ LP EK+ Q+I IL+KR +L QD DEIELDIEALD ETL
Sbjct: 393 DPNKREMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDIEALDNETL 452
Query: 257 WELDRFVTNYKKMVSKIKRQALMGINNVSSADANREVPMAEKIEVATDAKKAKK-GEAGD 315
WELDRFVTNY+KM SKIKRQ I NVS+ N M E+ + K+ +K GEAG+
Sbjct: 453 WELDRFVTNYRKMASKIKRQGF--IQNVSTPPRN----MPPVTEMGSAEKRGRKGGEAGE 506
Query: 316 EDVDIGDEIPMSSFPPVEIEK 336
EDVDIG++IP+ +P VEIE+
Sbjct: 507 EDVDIGEDIPVEDYPSVEIER 527
>sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana
GN=GTE3 PE=1 SV=1
Length = 461
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/276 (44%), Positives = 165/276 (59%), Gaps = 14/276 (5%)
Query: 1 MKNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
+K+C +LTKLMKHK G+IFN+PVDVV + LHDY++IIK PMDLGTVK++LSK+LY SP
Sbjct: 120 LKSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSKSLYKSPL 179
Query: 61 SFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQERVLDDEFP 120
FA DVRLTFNNAM YNP H+V+ +AE L FEE + P+ E E ++ + P
Sbjct: 180 EFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKWVPL------ETQYELLIRKQQP 233
Query: 121 AHSWNFHEVKEKEVVKQQPLPKPEPMQRVLATGSNHNPKPNPPPAAAAPQMPVRTPSPVR 180
+FH + LP P P + + A + PV+
Sbjct: 234 VRDIDFHAPVSTNTHNVEALPLPAPTPSLSPPPPPKVVENRTLERAESMTNPVK------ 287
Query: 181 VTPAVKPLKQPKPKAKDPNKREMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLRQD 240
PAV P+ K + R+++ +EK +L LQ LP +K+E V+ I+KKR L Q
Sbjct: 288 --PAVLPVVPEKLVEEASANRDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRTPELSQQ 345
Query: 241 EDEIELDIEALDTETLWELDRFVTNYKKMVSKIKRQ 276
+DEIELDI++LD ETLWEL RFVT YK+ +SK K +
Sbjct: 346 DDEIELDIDSLDLETLWELFRFVTEYKESLSKKKEE 381
>sp|Q9LNC4|GTE4_ARATH Transcription factor GTE4 OS=Arabidopsis thaliana GN=GTE4 PE=2 SV=1
Length = 766
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 177/312 (56%), Gaps = 49/312 (15%)
Query: 1 MKNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
KNC +L +LMKHK G++FN+PVDV G+ L DYY II++PMDLGT+KS L KNLY SP
Sbjct: 422 FKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSPR 481
Query: 61 SFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQERVLDDEFP 120
FA DVRLTF+NAMTYNP+ +VH++A L FEE + I
Sbjct: 482 EFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEA----------------- 524
Query: 121 AHSWNFHEVKEKEVVKQQPLPKPEPMQRVLATGSNHNPKPNPPP---------------- 164
+N +E V + P P R S P PPP
Sbjct: 525 --DYN----REMRFVTGYEMNLPTPTMR-----SRLGPTMPPPPINVRNTIDRADWSNRQ 573
Query: 165 AAAAPQMPVRTPSPVRVTPAVKPLKQPKPKAKDPNKREMSMEEKHKLGIGLQSLPQEKME 224
P + +P TPA+K KPKA +PNKR+M+ EEK KL LQ+LP +K++
Sbjct: 574 PTTTPGRTPTSATPSGRTPALK-----KPKANEPNKRDMTYEEKQKLSGHLQNLPPDKLD 628
Query: 225 QVIHILKKRNGNLRQDEDEIELDIEALDTETLWELDRFVTNYKKMVSKIKRQALMGINNV 284
++ I+ KRN ++ ++EIE+DI+++D ETLWELDRFVTNYKK +SK KR+A + I
Sbjct: 629 AIVQIVNKRNTAVKLRDEEIEVDIDSVDPETLWELDRFVTNYKKGLSKKKRKAELAIQAR 688
Query: 285 SSADANREVPMA 296
+ A+ N + MA
Sbjct: 689 AEAERNSQQQMA 700
>sp|Q8H1D7|GTE5_ARATH Transcription factor GTE5, chloroplastic OS=Arabidopsis thaliana
GN=GTE5 PE=1 SV=1
Length = 487
Score = 198 bits (503), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/283 (44%), Positives = 167/283 (59%), Gaps = 27/283 (9%)
Query: 1 MKNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
KNC +LTKLMKHK ++FN PVD G+ LHDY++I+K PMDLGTVK+KL K+LY SP
Sbjct: 133 FKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKSLYKSPL 192
Query: 61 SFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQERVL----D 116
FA DVRLTFNNA+ YNP H+V+ AE L FE+ + I MQ D R D
Sbjct: 193 DFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSIE---MQYDNLHRKFKPTRD 249
Query: 117 DEFPAHSWNFHEVKEKEVVKQQPLPKPEPMQRVLATGSNHNPKPNPPPAAAAPQMPVRT- 175
EFPA + + P EP+ ++ + S +P P PPP AAP + RT
Sbjct: 250 IEFPAPAPSI-------------APIVEPLPAIVPSPSPSSPPPPPPPPVAAPVLENRTW 296
Query: 176 ------PSPVRVTPAVKPLKQPKPKAKDPNKREMSMEEKHKLGIGLQSLPQEKMEQVIHI 229
PV + ++ + + N R++++EEK +L LQ LP +K+E V+ I
Sbjct: 297 EREESMTIPVEPEAVITAPEKAEEEEAPVNNRDLTLEEKRRLSEELQDLPYDKLETVVQI 356
Query: 230 LKKRNGNLRQDEDEIELDIEALDTETLWELDRFVTNYKKMVSK 272
+KK N L Q +DEIELDI++LD TLWEL RFVT YK+ +SK
Sbjct: 357 IKKSNPELSQKDDEIELDIDSLDINTLWELYRFVTGYKESLSK 399
>sp|Q7Y214|GTE7_ARATH Transcription factor GTE7 OS=Arabidopsis thaliana GN=GTE7 PE=2 SV=1
Length = 590
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/151 (62%), Positives = 115/151 (76%), Gaps = 6/151 (3%)
Query: 189 KQPKPKAKDPNKREMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLRQDEDEIELDI 248
K PKPKAKDPNKR M+MEEK KLG+ LQ LP EK+ Q++ IL+KRNG+L QD DEIELDI
Sbjct: 390 KLPKPKAKDPNKRLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDI 449
Query: 249 EALDTETLWELDRFVTNYKKMVSKIKRQALMGINNVSSADANREVPMAEKIEVATDAKKA 308
EA+D ETLWELDRFVTNYKKM SKIKRQ I NVS+ N MA E+ + K+
Sbjct: 450 EAVDNETLWELDRFVTNYKKMASKIKRQGF--IRNVSTPPRN----MASVAEMGSAEKRT 503
Query: 309 KKGEAGDEDVDIGDEIPMSSFPPVEIEKDNA 339
++G+AG+EDVDIG++IP+ +P VEIE+D
Sbjct: 504 RRGDAGEEDVDIGEDIPIEDYPSVEIERDGT 534
>sp|Q93YS6|GTE9_ARATH Transcription factor GTE9 OS=Arabidopsis thaliana GN=GTE9 PE=1 SV=1
Length = 688
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 167/355 (47%), Gaps = 63/355 (17%)
Query: 1 MKNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
MK C +L +LM H+ G++FN+PVDVV + + DY+++I++PMDLGTVK+KL+ Y P+
Sbjct: 138 MKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPS 197
Query: 61 SFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQERVLDDEFP 120
FAADVRLTF+NAMTYNP ++V+++A+ FE ++ + +KL V
Sbjct: 198 EFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVH--------- 248
Query: 121 AHSWNFHEVKEKEVVKQQPLPKPEPMQRVLATGSNHNPKPNPPPAAAAPQMPVRTPSPVR 180
N KEK +V P+ K R
Sbjct: 249 TEPSNLDAHKEKHIVIPVPMAKK------------------------------------R 272
Query: 181 VTPAVKPLKQPKPKAKDPNKREMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLRQ- 239
T AV DP KR M+ E++ KLG L+SL E Q+I+ L+ N N
Sbjct: 273 KTTAVDC-----ENVVDPAKRVMTDEDRLKLGKDLESL-TEFPAQLINFLRDHNSNEGGI 326
Query: 240 DEDEIELDIEALDTETLWELDRFVTNYKKMVSKIKRQALMGINNVSSADANREVPMAEKI 299
+DEIE+DI L L++L + + + + N SS + + +
Sbjct: 327 GDDEIEIDINDLSDHALFQLRDLLDEHLREIQ----------NKKSSVEPCEIELLHGSV 376
Query: 300 EVATDAKKAKKGEAGDEDVDIGD-EIPMSSFPPVEIEKDNAHNNNAASSSSSSSS 353
+ + E DE VDIG+ E P SS PV IEKD N+ +S S S
Sbjct: 377 PGNSSMQHCDGSELDDEVVDIGENEHPTSSISPVTIEKDLVLGNSNGNSLGSVSG 431
>sp|Q9LK27|GTE8_ARATH Transcription factor GTE8 OS=Arabidopsis thaliana GN=GTE8 PE=2 SV=2
Length = 813
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 126/272 (46%), Gaps = 60/272 (22%)
Query: 1 MKNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
MK C +L KL H ++F +PVDVV + + DY IK+PMDLGTVK L+ +Y SP
Sbjct: 177 MKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPH 236
Query: 61 SFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQERVLDDEFP 120
FAADVRLTF NAMTYNP H+VHI+ + FE ++ I +KL
Sbjct: 237 EFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKL--------------- 281
Query: 121 AHSWNFHEVKEKEVVKQQPLPKPEPMQRVLATGSNHNPKPNPPPAAAA---PQMPVRTPS 177
P MQ + A +PN AA P + S
Sbjct: 282 ---------------------PPCSMQTLPAV----TLEPNDERKAAISVPPAKKRKMAS 316
Query: 178 PVR--VTPAVKPLKQPKPKAKDPNKREMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNG 235
PVR V VKPL M+ E+H+LG L+SL E +I LKK N
Sbjct: 317 PVRESVPEPVKPL--------------MTEVERHRLGRQLESLLDELPAHIIDFLKKHNS 362
Query: 236 NLRQ-DEDEIELDIEALDTETLWELDRFVTNY 266
N + EDEIE+DI+ L E L L + Y
Sbjct: 363 NGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEY 394
>sp|Q93ZB7|GTE11_ARATH Transcription factor GTE11 OS=Arabidopsis thaliana GN=GTE11 PE=1
SV=1
Length = 620
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 169/374 (45%), Gaps = 73/374 (19%)
Query: 1 MKNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
MK C +L +LM + ++FN+PVDVV + + DY+ IIK+PMDLGTVKSKL+ Y SP+
Sbjct: 130 MKQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPS 189
Query: 61 SFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQERVLDDEFP 120
F+ADVRLTF NAMTYNP D+ V+ A+
Sbjct: 190 EFSADVRLTFRNAMTYNPSDNNVYRFADTL------------------------------ 219
Query: 121 AHSWNFHEVKEKEVVKQQPLPKPEPMQRVLATGSNHNPKPNPPPAAAAPQMPVRTPSPVR 180
F EV+ K + K+ K EP LAT + H P P A +M
Sbjct: 220 ---SKFFEVRWKTIEKKSSGTKSEPSN--LATLA-HKDIAIPEPVAKKRKM--------- 264
Query: 181 VTPAVKPLKQPKPKAKDPNKREMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGN-LRQ 239
AVK + +P KR M+ E++ KLG L SL + + Q+I+ L+ + R
Sbjct: 265 --NAVK-----RNSLLEPAKRVMTDEDRVKLGRDLGSLTEFPV-QIINFLRDHSSKEERS 316
Query: 240 DEDEIELDIEALDTETLWELDRFVTNYKKMVSKIKRQALMGINNVSSADANREVPMAEKI 299
+DEIE+DI L + L++L + + K D+N E + E +
Sbjct: 317 GDDEIEIDINDLSHDALFQLRDLFDEFLRENQK--------------KDSNGEPCVLELL 362
Query: 300 EVA----TDAKKAKKGEAGDEDVDIGD-EIPMSSFPPVEIEKDNAHNNNAASSSSSSSSS 354
+ + + E DEDVDIG+ E P+S V EKD+ N +S S
Sbjct: 363 HGSGPGNSLTQHCDGSELEDEDVDIGNYEHPISHISTVRTEKDSVGGLNQMEDASRGKLS 422
Query: 355 SSSDSSSSSDSDSG 368
+ D +S
Sbjct: 423 LIEGADGHQDGNSA 436
>sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 PE=1
SV=2
Length = 1061
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 170/349 (48%), Gaps = 69/349 (19%)
Query: 1 MKNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
MK C +L +L HK G+ F +PVD V + + DY+++IK+PMDLGT++S+L K Y SP
Sbjct: 162 MKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPL 221
Query: 61 SFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQERVLDDEFP 120
FAADVRLTF+N++ YNP ++ H +A+ FE
Sbjct: 222 DFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFE------------------------- 256
Query: 121 AHSWNFHEVKEKEVVKQQPLPKPEPMQRVLATGSNHNPKPNPPPAAAAPQMPVRTPSPVR 180
W K + K+ P+ KP + P A+ ++P +P+R
Sbjct: 257 -SGW-------KSIEKKIPMSKPPVI-------------PLTSSASLESEIPFEV-APMR 294
Query: 181 VTPAVKPLKQPKPKAKDPNKREMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLRQD 240
A + K + +P K M+ EK KLG L +L ++ +++ +L++++G+ Q
Sbjct: 295 KKEAA--MNDNKLRV-EPAKLVMTDGEKKKLGQDLMALEEDFPQKIADLLREQSGSDGQS 351
Query: 241 -EDEIELDIEALDTETLWELDRFVTNY---KKMVSKIKRQALMGINNVSSADANREVPMA 296
E EIE+DIEAL E L+ + + + +Y KK + M I + S + P
Sbjct: 352 GEGEIEIDIEALSDEILFMVRKLLDDYLREKKKSMEKSEPCEMEIVHDSGFSNSPLQPSK 411
Query: 297 EKIEVATDAKKAKKGEAGDEDVDI--GDEIPMSSFPPVEIEKDNAHNNN 343
+++ DEDVDI G++ +SS PP++IEKD A NN
Sbjct: 412 GDLQI-------------DEDVDIVGGNDPSVSSHPPLKIEKDAACRNN 447
>sp|Q9LS28|GTE12_ARATH Transcription factor GTE12 OS=Arabidopsis thaliana GN=GTE12 PE=2
SV=2
Length = 494
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 86/139 (61%), Gaps = 17/139 (12%)
Query: 4 CGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFA 63
C +L LM+H+ G++F PVD V M + DY+++I+ PMDLGTVKSKL KN+Y + FA
Sbjct: 73 CLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFA 132
Query: 64 ADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQERVLDDEFPAHS 123
ADVRLTF NAM YNP +EVH IA++ E+F E LM++ V S
Sbjct: 133 ADVRLTFANAMHYNPLWNEVHTIAKE----INEIFEVRWESLMKKKVLR---------LS 179
Query: 124 WNFHEVKEKEVVKQQPLPK 142
WN EV+E K+QP+ +
Sbjct: 180 WN--EVREG--YKRQPVER 194
>sp|Q84XV2|GTE1_ARATH Transcription factor GTE1 OS=Arabidopsis thaliana GN=GTE1 PE=2 SV=1
Length = 386
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 40/272 (14%)
Query: 1 MKNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
M+ + ++ +HK + F PVDV G+ LHDYY +I+ PMDLGT+K K+ + Y +
Sbjct: 111 MRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVR 170
Query: 61 SFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQERVLDDEFP 120
ADVRL F NAM YN + +V+++AE L +FEE + I KL++E +++ +D+E
Sbjct: 171 EIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEE--EKKQVDEE-- 226
Query: 121 AHSWNFHEVKEKEVVKQQPLPKPEPMQRVLATGSNHNPKPNPPPAAAAPQMPVRTPSPVR 180
H K AA A +
Sbjct: 227 --------------------------------AEKHANKQLTMEAAQAEMARDLSNELYE 254
Query: 181 VTPAVKPLKQPKPKAKDPNKREMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLRQD 240
+ ++ L++ + R++S +EK L L L E + + + ++ + N +
Sbjct: 255 IDLQLEKLRESVVQ----RCRKLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAG 310
Query: 241 EDEIELDIEALDTETLWELDRFVTNYKKMVSK 272
E+ELDI+ TLW L FV K +K
Sbjct: 311 APEVELDIDVQTDVTLWRLKVFVQEALKAANK 342
>sp|D4A7T3|BRDT_RAT Bromodomain testis-specific protein OS=Rattus norvegicus GN=Brdt
PE=1 SV=1
Length = 952
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+K+C +IL +++ K + F +PVDV + LH+YYDI+KNPMDLGT+K K+ K Y
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYK 331
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPI 101
FAADVRL F N YNP DHEV +A FE F I
Sbjct: 332 DACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
+L L KH + F PVD + L DYY II+ PMDL T+K +L Y+ + D
Sbjct: 38 VLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGDF 97
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQ----FLARFEELFRPINEKL------MQEDVQERV 114
F+N YN ++ ++A+ F+ + ++ P E++ M++D+Q++
Sbjct: 98 NTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQM--PQEEQIVGGKERMKKDIQQKT 153
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 10/62 (16%)
Query: 199 NKREMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLRQ-DEDEIELDIEALDTETLW 257
N + M+ +EK +L + + LP +K+ +++HI++ R +LR + DEIE+D +
Sbjct: 501 NAKPMNYDEKRQLSLDINKLPGDKLGRIVHIIQSREPSLRNSNPDEIEID---------F 551
Query: 258 EL 259
E
Sbjct: 552 ET 553
>sp|Q4R8Y1|BRDT_MACFA Bromodomain testis-specific protein OS=Macaca fascicularis GN=BRDT
PE=2 SV=3
Length = 947
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+++C +IL +++ K + F +PVDV + LH+YYDI+KNPMDLGT+K K+ Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPI 101
FAADVRL F N YNP DHEV +A FE F I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
+L L KH + F PVD V + L DYY IIKNPMDL T+K +L Y + D
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDF 98
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQERVL 115
F+N YN ++ ++A+ E+LF +KL Q +E+V+
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQA----LEKLFV---QKLSQMPQEEQVV 140
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 28/178 (15%)
Query: 89 QFLARFEELFRPINEKLMQEDVQERVLDDEFPAHSWNFHEVKEKEVVKQQPLPKPEPMQR 148
Q LA+ +E + ++++L +VL + P N + K K+ K++ +
Sbjct: 421 QRLAKLQEQLKAVHQQL-------QVL-SQVPFRKLNKKKEKSKKEKKKEKV-------- 464
Query: 149 VLATGSNHNPKPNPPPAAAAPQMPVRTPSPVRVTPAVKPLKQPKPKAKDP-NKREMSMEE 207
SN NP+ QM ++ S R P + + K++D N + M+ +E
Sbjct: 465 ---NNSNENPR------KMCEQMRLKEKSK-RNQPKKRKQQYIGQKSEDEDNAKPMNYDE 514
Query: 208 KHKLGIGLQSLPQEKMEQVIHILKKRNGNL-RQDEDEIELDIEALDTETLWELDRFVT 264
K +L + + LP +K+ +V+HI++ R +L + DEIE+D E L TL EL+++V+
Sbjct: 515 KRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLRELEKYVS 572
>sp|Q58F21|BRDT_HUMAN Bromodomain testis-specific protein OS=Homo sapiens GN=BRDT PE=1
SV=4
Length = 947
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+++C +IL +++ K + F +PVDV + LH+YYD++KNPMDLGT+K K+ Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPI 101
FAADVRL F N YNP DHEV +A FE F I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
+L L KH + F PVD V + L DYY IIKNPMDL T+K +L Y + D
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 98
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQED----VQERV 114
F+N YN ++ ++A+ E+LF ++ QE+ V+ER+
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQA----LEKLFMQKLSQMPQEEQVVGVKERI 146
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 28/176 (15%)
Query: 91 LARFEELFRPINEKLMQEDVQERVLDDEFPAHSWNFHEVKEKEVVKQQPLPKPEPMQRVL 150
LA+ +E + ++++L +VL + P N + K K+ K++ +
Sbjct: 423 LAKLQEQLKAVHQQL-------QVL-SQVPFRKLNKKKEKSKKEKKKEKV---------- 464
Query: 151 ATGSNHNPKPNPPPAAAAPQMPVRTPSPVRVTPAVKPLKQPKPKAKDP-NKREMSMEEKH 209
SN NP+ QM ++ S R P + + K++D N + M+ +EK
Sbjct: 465 -NNSNENPR------KMCEQMRLKEKSK-RNQPKKRKQQFIGLKSEDEDNAKPMNYDEKR 516
Query: 210 KLGIGLQSLPQEKMEQVIHILKKRNGNL-RQDEDEIELDIEALDTETLWELDRFVT 264
+L + + LP +K+ +V+HI++ R +L + DEIE+D E L TL EL+++V+
Sbjct: 517 QLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLRELEKYVS 572
>sp|Q91Y44|BRDT_MOUSE Bromodomain testis-specific protein OS=Mus musculus GN=Brdt PE=1
SV=3
Length = 956
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+K+C +IL +++ K + F +PVD + LH+YYD++KNPMDLGT+K K+ Y
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYK 331
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPI 101
FAADVRL F N YNP DHEV +A FE F I
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKI 375
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
+L L KH + F PVD V + L DYY IIK PMDL T+K +L Y+ + D
Sbjct: 38 VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDF 97
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQERVL 115
F+N YN ++ ++A+ E+LF +KL Q +E+V+
Sbjct: 98 NTMFSNCYLYNKTGDDIVVMAQA----LEKLFM---QKLSQMPQEEQVV 139
>sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2
Length = 1362
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+K C IL ++ K + F PVDV + LHDY DIIK+PMD+ T+KSKL Y
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELF 98
F ADVRL F+N YNP DHEV +A + FE F
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 454
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
+L L KH+ + F PVD V + L DYY IIK PMD+GT+K +L N Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQ----FLARFEEL 97
F N YN ++ ++AE FL + EL
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 164
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 201 REMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLR-QDEDEIELDIEALDTETLWEL 259
+ MS EEK +L + + LP EK+ +V+HI++ R +L+ + DEIE+D E L TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 260 DRFVTN 265
+R+VT+
Sbjct: 668 ERYVTS 673
>sp|Q9ESU6|BRD4_MOUSE Bromodomain-containing protein 4 OS=Mus musculus GN=Brd4 PE=1 SV=1
Length = 1400
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+K C IL ++ K + F PVDV + LHDY DIIK+PMD+ T+KSKL Y
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELF 98
F ADVRL F+N YNP DHEV +A + FE F
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 455
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
+L L KH+ + F PVD V + L DYY IIK PMD+GT+K +L N Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQ----FLARFEEL 97
F N YN ++ ++AE FL + EL
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 164
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 201 REMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLR-QDEDEIELDIEALDTETLWEL 259
+ MS EEK +L + + LP EK+ +V+HI++ R +L+ + DEIE+D E L TL EL
Sbjct: 609 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 668
Query: 260 DRFVTN 265
+R+VT+
Sbjct: 669 ERYVTS 674
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 1 MKNCGQILTKLMKHK-LGYI--FNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+K+C +IL +L K GY F PVD + LHDY+DIIK PMDLGTVK K+ Y
Sbjct: 481 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 540
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPI 101
S FAADVRL F N YNP DH+V + + FE + I
Sbjct: 541 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
++ + KH + F PVD + L DY+ IIK PMD+GT+K +L N Y S D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQ----FLARFEEL 97
FNN YN +V ++A+ FL + E +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 201 REMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLR-QDEDEIELDIEALDTETLWEL 259
+ MS +EK +L + + LP +K+ +V+HI++ R +LR + DEIE+D E L TL EL
Sbjct: 950 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 1009
Query: 260 DRFV 263
+ +V
Sbjct: 1010 ESYV 1013
>sp|Q5TJG6|BRD2_CANFA Bromodomain-containing protein 2 OS=Canis familiaris GN=BRD2 PE=3
SV=1
Length = 803
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+K+C IL +L+ K + F PVD + LHDY+DIIK+PMDL TVK K+ Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFR 99
FAADVRL F+N YNP DH+V +A + FE FR
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE--FR 449
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
++ L KH+ + F PVD V + L DY+ IIK PMD+GT+K +L N Y + + D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQF 90
F N YN ++ ++A+
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTL 169
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 201 REMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLR-QDEDEIELDIEALDTETLWEL 259
R MS +EK +L + + LP EK+ +V+HI++ R +LR + +EIE+D E L TL EL
Sbjct: 642 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 701
Query: 260 DRFV 263
+R+V
Sbjct: 702 ERYV 705
>sp|Q32S26|BRD2_BOVIN Bromodomain-containing protein 2 OS=Bos taurus GN=BRD2 PE=3 SV=1
Length = 803
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+K+C IL +L+ K + F PVD + LHDY+DIIK+PMDL TVK K+ Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFR 99
FAADVRL F+N YNP DH+V +A + FE FR
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE--FR 449
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
++ L KH+ + F PVD V + L DY+ IIK PMD+GT+K +L N Y + + D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQFLARFEELF 98
F N YN ++ ++A+ E++F
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQT----LEKIF 173
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 201 REMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLR-QDEDEIELDIEALDTETLWEL 259
R MS +EK +L + + LP EK+ +V+HI++ R +LR + +EIE+D E L TL EL
Sbjct: 642 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 701
Query: 260 DRFV 263
+R+V
Sbjct: 702 ERYV 705
>sp|P25440|BRD2_HUMAN Bromodomain-containing protein 2 OS=Homo sapiens GN=BRD2 PE=1 SV=2
Length = 801
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+K+C IL +L+ K + F PVD + LHDY+DIIK+PMDL TVK K+ Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFR 99
FAADVRL F+N YNP DH+V +A + FE FR
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE--FR 449
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
++ L KH+ + F PVD V + L DY+ IIK PMD+GT+K +L N Y + + D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQF 90
F N YN ++ ++A+
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTL 169
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 201 REMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLR-QDEDEIELDIEALDTETLWEL 259
R MS +EK +L + + LP EK+ +V+HI++ R +LR + +EIE+D E L TL EL
Sbjct: 640 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 699
Query: 260 DRFV 263
+R+V
Sbjct: 700 ERYV 703
>sp|Q8K2F0|BRD3_MOUSE Bromodomain-containing protein 3 OS=Mus musculus GN=Brd3 PE=1 SV=2
Length = 726
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+++C IL +++ K + F PVD + LHDY+DIIK+PMDL TVK K+ Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELF 98
FAAD+RL F+N YNP DHEV +A + FE F
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 411
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
++ L KH+ + F PVD + + L DY+ IIKNPMD+GT+K +L N Y S + D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQ 111
F N YN ++ ++A+ E++F ++ QE+V+
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQA----LEKIFLQKVAQMPQEEVE 145
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 203 MSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLR-QDEDEIELDIEALDTETLWELDR 261
MS +EK +L + + LP EK+ +V+HI++ R +LR + DEIE+D E L TL EL+R
Sbjct: 573 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 632
Query: 262 FVTNYKKMVSKIKRQALMGINNVSSADANREVPMAEKIEV 301
+V K + K +R+ L +A + E+ +K E+
Sbjct: 633 YV---KSCLQKKQRKPLSTSGKKQAAKSKEELAQEKKKEL 669
>sp|Q7JJ13|BRD2_MOUSE Bromodomain-containing protein 2 OS=Mus musculus GN=Brd2 PE=1 SV=1
Length = 798
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+K+C IL +L+ K + F PVD + LHDY+DIIK+PMDL TVK K+ Y
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFR 99
FAADVRL F+N YNP DH+V +A + FE FR
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE--FR 448
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
++ L KH+ + F PVD V + L DY+ IIK PMD+GT+K +L N Y + + D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQFLARFEELF 98
F N YN ++ ++A+ E++F
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQT----LEKIF 172
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 201 REMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLR-QDEDEIELDIEALDTETLWEL 259
R MS +EK +L + + LP EK+ +V+HI++ R +LR + +EIE+D E L TL EL
Sbjct: 638 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 697
Query: 260 DRFV 263
+R+V
Sbjct: 698 ERYV 701
>sp|Q6MGA9|BRD2_RAT Bromodomain-containing protein 2 OS=Rattus norvegicus GN=Brd2 PE=2
SV=1
Length = 798
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+K+C IL +L+ K + F PVD + LHDY+DIIK+PMDL TVK K+ Y
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFR 99
FAADVRL F+N YNP DH+V +A + FE FR
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE--FR 448
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
++ L KH+ + F PVD V + L DY+ IIK PMD+GT+K +L N Y + + D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQF 90
F N YN ++ ++A+
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTL 168
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 201 REMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLR-QDEDEIELDIEALDTETLWEL 259
R MS +EK +L + + LP EK+ +V+HI++ R +LR + +EIE+D E L TL EL
Sbjct: 638 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 697
Query: 260 DRFV 263
+R+V
Sbjct: 698 ERYV 701
>sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1
Length = 726
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
++ C IL +++ K + F PVD + LHDY+DIIK+PMDL TVK K+ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELF 98
FAADVRL F+N YNP DHEV +A + FE F
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
++ L KH+ + F PVD + + L DY+ IIKNPMD+GT+K +L N Y S + D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPINEKLMQEDVQ 111
F N YN ++ ++A+ E++F ++ QE+V+
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQA----LEKIFLQKVAQMPQEEVE 146
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 203 MSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLR-QDEDEIELDIEALDTETLWELDR 261
MS +EK +L + + LP EK+ +V+HI++ R +LR + DEIE+D E L TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 262 FVTNYKKMVSKIKRQALMGINNVSSADANREVPMAEKIEV 301
+V K + K +R+ +A + E+ +K E+
Sbjct: 632 YV---KSCLQKKQRKPFSASGKKQAAKSKEELAQEKKKEL 668
>sp|Q55C84|Y0170_DICDI Bromodomain-containing protein DDB_G0270170 OS=Dictyostelium
discoideum GN=DDB_G0270170 PE=4 SV=1
Length = 1578
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%)
Query: 1 MKNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
K C +L +L +H+ F VD + + DY+D+IK+PMDLGT+K+ L YD+
Sbjct: 741 FKRCLDLLEELFEHQHSPPFLVAVDPYALGILDYFDVIKHPMDLGTIKASLIGGGYDTID 800
Query: 61 SFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELF 98
FA D RL F+NA TYNP + VHI+A+ FE+ F
Sbjct: 801 KFAEDCRLVFSNAKTYNPSTNPVHIMAQSLEDVFEKGF 838
Score = 35.4 bits (80), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 202 EMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLRQD-EDEIELDIEALDTETLWELD 260
+++ EEK KLG + LP + + ++ I+ N Q E+ +D+ D + L L
Sbjct: 966 KVTTEEKTKLGAEITQLPVDLLPSILQIIHNTNSLPEQKPGSEVVIDLMKFDDDILRRLS 1025
Query: 261 RFVTNYK 267
+FV YK
Sbjct: 1026 KFVEQYK 1032
>sp|P35817|BDF1_YEAST Bromodomain-containing factor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF1 PE=1 SV=3
Length = 686
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 129/299 (43%), Gaps = 58/299 (19%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
MK C +L +LM K Y F PVD V M L Y+D +K PMDLGT+ KL+ Y
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELF------RP----------- 100
+ F DVRL F N T+NP V+++ R EE+F RP
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGH----RLEEVFNSKWADRPNLDDYDSDEDS 433
Query: 101 --------INEKLMQEDVQERVLDDEFPAHSWNFHEVKEKEV----VKQQPLPKPEPMQR 148
+ + D+ E ++ + PA + ++ +V +K+Q L K +R
Sbjct: 434 RTQGDYDDYESEYSESDIDETIITN--PAIQYLEEQLARMKVELQQLKKQELEKIRK-ER 490
Query: 149 VLATGSNHNPKPNPPPAAAAPQMPVRTPSPVRVTPAVKPLKQPKPKAKDPNKREMSMEEK 208
LA GS K + + + + K + K K K +M K
Sbjct: 491 RLARGSKKRGKRSKGRSGSK-------------NASSKGRRDKKNKLKTVVTYDM----K 533
Query: 209 HKLGIGLQSLPQEKMEQVIHILKKRNGNLRQDEDEIELDIEALDTETLWEL-DRFVTNY 266
+ + LP K+E+ I I+KK N+ +D DE+ELD++ LD T+ L + F Y
Sbjct: 534 RIITERINDLPTSKLERAIDIIKKSMPNISED-DEVELDLDTLDNHTILTLYNTFFRQY 591
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 20 FNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADVRLTFNNAMTYNPK 79
F PVD V + + Y++ IK PMDL T++ KL+ Y+ P D L NN++ +N
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 80 DHEVHIIAEQFLARFEE 96
+ + +A A FE+
Sbjct: 233 NAGISQMARNIQASFEK 249
>sp|Q54BA2|Y3800_DICDI Ankyrin repeat, bromo and BTB domain-containing protein
DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800
PE=4 SV=1
Length = 806
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%)
Query: 4 CGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFA 63
C ++ + K K F PVD + + DY+D+IK+PMDLGT+K KL N Y + FA
Sbjct: 525 CKGLINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFA 584
Query: 64 ADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELF 98
ADVRL F NA+TYN V A+ L F++ F
Sbjct: 585 ADVRLMFENALTYNADSSPVWKHAKTLLNAFDQKF 619
>sp|Q9FT54|GTE6_ARATH Transcription factor GTE6 OS=Arabidopsis thaliana GN=GTE6 PE=2 SV=1
Length = 369
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 1 MKNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSK---NLYD 57
M+ G I ++ +HK + F PV+V G+ LHDY+++I PMD T+K+++ Y
Sbjct: 95 MRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYK 154
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEE 96
AD+RL F NAM YN + +V+ +A++ L +FEE
Sbjct: 155 HVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEE 193
>sp|F1QW93|BRDT_DANRE Bromodomain testis-specific protein OS=Danio rerio GN=brdt PE=2
SV=2
Length = 918
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+K C IL ++ K + F PVD + L DY++II PMD+ T+K K+ Y
Sbjct: 273 LKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYT 332
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPI 101
FAAD+RL F+N YNP HEV +A + FE F I
Sbjct: 333 DALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
++ L KH + F PVD V + L DYY IIKNPMDL T++ +L N Y D
Sbjct: 41 VIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVEDF 100
Query: 67 RLTFNNAMTYN-PKDHEV---HIIAEQFLARFEEL 97
F N YN P D V ++ + FL + E+
Sbjct: 101 NTMFTNCYVYNRPGDDIVLMAQVLEKLFLEKVAEM 135
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 199 NKREMSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLR-QDEDEIELDIEALDTETLW 257
N MS EEK +L + + LP +K+ +V++I+K R LR D +EIE+D E L TL
Sbjct: 502 NTLPMSYEEKRQLSLDINKLPGDKLGKVVNIIKAREPLLRDTDPEEIEIDFETLKPSTLR 561
Query: 258 ELDRFVTN 265
L+ +V
Sbjct: 562 ALECYVVG 569
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%)
Query: 20 FNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADVRLTFNNAMTYNPK 79
F PVD + + DY+DI+KNPMDL T+K KL Y P + DV L FNNA YN K
Sbjct: 1111 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1170
Query: 80 DHEVHIIAEQFLARFEELFRPINEKL 105
V+ + FE+ P+ + L
Sbjct: 1171 TSRVYKFCSKLAEVFEQEIDPVMQSL 1196
>sp|Q6JHU9|CBP_RAT CREB-binding protein OS=Rattus norvegicus GN=Crebbp PE=2 SV=1
Length = 2442
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%)
Query: 20 FNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADVRLTFNNAMTYNPK 79
F PVD + + DY+DI+KNPMDL T+K KL Y P + DV L FNNA YN K
Sbjct: 1112 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1171
Query: 80 DHEVHIIAEQFLARFEELFRPINEKL 105
V+ + FE+ P+ + L
Sbjct: 1172 TSRVYKFCSKLAEVFEQEIDPVMQSL 1197
>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=3
Length = 2441
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%)
Query: 20 FNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADVRLTFNNAMTYNPK 79
F PVD + + DY+DI+KNPMDL T+K KL Y P + DV L FNNA YN K
Sbjct: 1112 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1171
Query: 80 DHEVHIIAEQFLARFEELFRPINEKL 105
V+ + FE+ P+ + L
Sbjct: 1172 TSRVYKFCSKLAEVFEQEIDPVMQSL 1197
>sp|Q9HGP4|YK82_SCHPO Bromodomain-containing protein C631.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC631.02 PE=1 SV=3
Length = 727
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
MK C +L +L+K + Y F PV+ DY+ +IK+PMDLGT+++KL+ N Y
Sbjct: 394 MKFCQSVLKELLKKQHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYA 453
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELF 98
S +F AD+ L F N +N VH++ ++ + F++L+
Sbjct: 454 SMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLESIFQKLW 494
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
+L +L + + F +PVD V + DY IIKNP+DLGT++ K S +Y S F D+
Sbjct: 241 MLRQLRRGRDSIPFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDM 300
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPI 101
L F+N YN + V ++ + A FE + +
Sbjct: 301 NLMFSNCFLYNGTESPVGVMGKNLQATFERQLKQL 335
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 2 KNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKN--LYDSP 59
+ C ++L L H++ F PV + + DYY IIKNPMDL T+K +L ++ +Y P
Sbjct: 907 RKCERLLLFLYCHEMSLAFQDPVP---LTVPDYYKIIKNPMDLSTIKKRLQEDYCMYTKP 963
Query: 60 ASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFR 99
F AD RL F N +N D EV + + FEEL +
Sbjct: 964 EDFVADFRLIFQNCAEFNEPDSEVANAGIKLESYFEELLK 1003
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 2 KNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKN--LYDSP 59
+ C ++L L H++ F PV + + DYY IIKNPMDL T+K +L ++ +Y P
Sbjct: 906 RKCERLLLFLYCHEMSLAFQDPVP---LTVPDYYKIIKNPMDLSTIKKRLQEDYSMYSKP 962
Query: 60 ASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFR 99
F AD RL F N +N D EV + FEEL +
Sbjct: 963 EDFVADFRLIFQNCAEFNEPDSEVANAGIKLENYFEELLK 1002
>sp|Q07442|BDF2_YEAST Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF2 PE=1 SV=1
Length = 638
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 1 MKNCGQILTKLMKHK---LGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYD 57
+ C +IL LM K + + F PVD + + L +Y+D++KNPMDLGT+ + L Y
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 58 SPASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELF 98
+ F D+ L F N +NP+ +EVH + + + +ELF
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGK----KLKELF 419
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 20 FNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADVRLTFNNAMTYNPK 79
F PVD + + + Y++ ++ PMDL +++KL N+Y S +D + +N + +N
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 80 DHEVHIIAEQFLARFEE 96
+ + +A++ FE+
Sbjct: 218 ESSISSMAKRIQKYFEK 234
>sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens GN=EP300 PE=1 SV=2
Length = 2414
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 20 FNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADVRLTFNNAMTYNPK 79
F PVD + + DY+DI+K+PMDL T+K KL Y P + D+ L FNNA YN K
Sbjct: 1075 FRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQEPWQYVDDIWLMFNNAWLYNRK 1134
Query: 80 DHEVHIIAEQFLARFEELFRPINEKL 105
V+ + FE+ P+ + L
Sbjct: 1135 TSRVYKYCSKLSEVFEQEIDPVMQSL 1160
>sp|F7DRV9|BRDT_XENTR Bromodomain testis-specific protein OS=Xenopus tropicalis GN=brdt
PE=3 SV=1
Length = 933
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 MKNCGQILTKLMKHKLG-YIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSP 59
+K+C IL ++M K Y + V+ +L D D IK+PMDL T++ K+ LY
Sbjct: 284 LKHCNNILNEMMSKKHAEYAWPFYKTVIPTSLLDCSDAIKHPMDLATIRDKMENGLYKDT 343
Query: 60 ASFAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFRPI 101
FA+DVRL F N+ YNP D+EV +A + FE +F I
Sbjct: 344 QDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFEGMFAKI 385
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
+L L +H + F PVD + L DYY IIKNPMDL T++ +L N Y D
Sbjct: 40 VLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 67 RLTFNNAMTYNPKDHEVHIIAEQFLARFEE 96
F N YN ++ +++++ F E
Sbjct: 100 NTMFTNCYIYNKPGDDIVVMSQELEKVFME 129
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 203 MSMEEKHKLGIGLQSLPQEKMEQVIHILKKRNGNLR-QDEDEIELDIEALDTETLWELDR 261
MS +EK +L + + LP EK+ +++HI++ R +L+ + +EIE+D E L TL L++
Sbjct: 505 MSYDEKRQLSLDINKLPGEKLGRIVHIIQSREPSLKDSNPNEIEIDFETLKQSTLRHLEK 564
Query: 262 FV 263
+V
Sbjct: 565 YV 566
>sp|B2RWS6|EP300_MOUSE Histone acetyltransferase p300 OS=Mus musculus GN=Ep300 PE=1 SV=1
Length = 2415
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 20 FNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADVRLTFNNAMTYNPK 79
F PVD + + DY+DI+K+PMDL T+K KL Y P + D+ L FNNA YN K
Sbjct: 1074 FRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQEPWQYIDDIWLMFNNAWLYNRK 1133
Query: 80 DHEVHIIAEQFLARFEELFRPINEKL 105
V+ + FE+ P+ + L
Sbjct: 1134 TSRVYKYCSKLSEVFEQEIDPVMQSL 1159
>sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens
GN=BRWD1 PE=1 SV=4
Length = 2320
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 2 KNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPAS 61
K C +++ + + + F PVD+V DY DII PMD GTV+ L YDSP
Sbjct: 1320 KQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDFGTVRETLDAGNYDSPLE 1377
Query: 62 FAADVRLTFNNAMTYNP-KDHEVHIIAEQFLARFEELFRPIN 102
F D+RL F+NA Y P K +++ + + A FEE + I+
Sbjct: 1378 FCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1419
Score = 38.9 bits (89), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 4 CGQILT---KLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
C +I++ +L+ + F PVD+ Y ++ P DL T++ +L Y +
Sbjct: 1166 CDRIISGIDQLLNLDIAAAFAGPVDLCTYP--KYCTVVAYPTDLYTIRMRLVNRFYRRLS 1223
Query: 61 SFAADVRLTFNNAMTYN 77
+ +VR +NA T+N
Sbjct: 1224 ALVWEVRYIEHNARTFN 1240
>sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens
GN=BAZ2A PE=1 SV=4
Length = 1905
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 4 CGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFA 63
C IL ++ H + F PV+ + Y IIKNPMD T++ +L + Y S FA
Sbjct: 1802 CEIILMEMESHDAAWPFLEPVNP--RLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFA 1859
Query: 64 ADVRLTFNNAMTYNPKDHEV----HIIAEQFLARFEELFR 99
AD L F+N T+N D EV HI+ F +R+EE ++
Sbjct: 1860 ADALLVFDNCQTFNEDDSEVGKAGHIMRRFFESRWEEFYQ 1899
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus musculus
GN=Baz2a PE=1 SV=2
Length = 1889
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 4 CGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFA 63
C IL ++ H + F PV+ + Y +IKNPMD T++ +L + Y S FA
Sbjct: 1786 CEIILMEMESHDAAWPFLEPVNP--RLVSGYRRVIKNPMDFSTMRERLLRGGYTSSEEFA 1843
Query: 64 ADVRLTFNNAMTYNPKDHEV----HIIAEQFLARFEELFR 99
AD L F+N T+N D EV H++ F +R+EE ++
Sbjct: 1844 ADALLVFDNCQTFNEDDSEVGKAGHVMRRFFESRWEEFYQ 1883
>sp|Q921C3|BRWD1_MOUSE Bromodomain and WD repeat-containing protein 1 OS=Mus musculus
GN=Brwd1 PE=1 SV=2
Length = 2304
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 2 KNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPAS 61
+ C +L + + + F PVD+ DY DII PMD GTV+ L YDSP
Sbjct: 1322 RQCKALLILIFQCEDSEPFRQPVDLDEYP--DYRDIIDTPMDFGTVRETLEAGNYDSPVE 1379
Query: 62 FAADVRLTFNNAMTYNP-KDHEVHIIAEQFLARFEELFRPIN 102
F D+RL F+NA Y P K +++ + + A FEE + I+
Sbjct: 1380 FCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1421
Score = 38.9 bits (89), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 4 CGQILT---KLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
C +I++ +L+ + F PVD+ Y ++ P DL T++ +L Y +
Sbjct: 1167 CDRIISGIDQLLNLDIAAAFAGPVDLC--TYPKYCTVVAYPTDLYTIRMRLVNRFYRRLS 1224
Query: 61 SFAADVRLTFNNAMTYN 77
+ +VR +NA T+N
Sbjct: 1225 ALIWEVRYIEHNARTFN 1241
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 2 KNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPAS 61
K C I+ +L + K F PVD + + DY I+KNPMDLGT++ KL+ Y P
Sbjct: 91 KYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQE 150
Query: 62 FAADVRLTFNNAMTYNPKDHEVHIIAEQFLARFEELFR 99
F D+ L F+N YN + V + + FE +
Sbjct: 151 FIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLK 188
>sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus GN=Trim33 PE=1
SV=2
Length = 1142
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 2 KNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSK---NLYDS 58
+ C ++L L H+L F PV V ++ +YY IIK PMDL TVK KL K Y
Sbjct: 979 RKCERLLLYLYCHELSIEFQEPVPV---SIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQI 1035
Query: 59 PASFAADVRLTFNNAMTYNPKDHEVHIIAE 88
P F ADVRL F N +N V + A+
Sbjct: 1036 PDDFVADVRLIFKNCERFNEMMKVVQVYAD 1065
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 6 QILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAAD 65
++L L HK+ + F PVD DYY +IK PMDL T++ ++ + Y+ F AD
Sbjct: 2938 RVLRSLQAHKMAWPFLEPVDPNDAP--DYYGVIKEPMDLATMEERVQRRYYEKLTEFVAD 2995
Query: 66 VRLTFNNAMTYNPKDHEVHIIAEQFLARF 94
+ F+N YNP D + AE + F
Sbjct: 2996 MTKIFDNCRYYNPSDSPFYQCAEVLESFF 3024
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 1 MKNCGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPA 60
++ C +IL K++K++ + F PV DYYD+I +PMD TV++K S Y S
Sbjct: 1345 LQKCEEILHKIVKYRFSWPFREPV--TRDEAEDYYDVITHPMDFQTVQNKCSCGSYRSVQ 1402
Query: 61 SFAADVRLTFNNAMTYNPKDHEV 83
F D++ F NA YN + V
Sbjct: 1403 EFLTDMKQVFTNAEVYNCRGSHV 1425
>sp|Q6BGW1|GCN5_DEBHA Histone acetyltransferase GCN5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GCN5 PE=3 SV=2
Length = 455
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 7 ILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSKNLYDSPASFAADV 66
+L++L H + F++PV+ + DYYD+IK PMDL T++SKL + YDS F D
Sbjct: 354 LLSELTNHPSAWPFSTPVN--KEEVGDYYDVIKEPMDLSTMESKLENDKYDSFDQFLYDA 411
Query: 67 RLTFNNAMTYN 77
RL FNN +YN
Sbjct: 412 RLIFNNCRSYN 422
>sp|Q56R14|TRI33_XENLA E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis GN=trim33 PE=1
SV=1
Length = 1091
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 4 CGQILTKLMKHKLGYIFNSPVDVVGMALHDYYDIIKNPMDLGTVKSKLSK---NLYDSPA 60
C ++L L H+L F PV + +YY IIK PMDL TVK KL K Y +P
Sbjct: 929 CERLLLYLYCHELSIEFQEPVPA---TIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQTPE 985
Query: 61 SFAADVRLTFNNAMTYN 77
F ADVRL F N +N
Sbjct: 986 DFVADVRLIFKNCERFN 1002
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.126 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,945,656
Number of Sequences: 539616
Number of extensions: 6948721
Number of successful extensions: 112453
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 925
Number of HSP's that attempted gapping in prelim test: 69136
Number of HSP's gapped (non-prelim): 24990
length of query: 382
length of database: 191,569,459
effective HSP length: 119
effective length of query: 263
effective length of database: 127,355,155
effective search space: 33494405765
effective search space used: 33494405765
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)