BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016815
(382 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BX32|SLX1_MOUSE Structure-specific endonuclease subunit SLX1 OS=Mus musculus
GN=Slx1b PE=2 SV=1
Length = 270
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMVLCIYGF 104
FF YLL PR +G Y+GFTVNP RR+RQHN G + GA RT R PW+MVL I+GF
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIHGF 69
Query: 105 PTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESLNIKVNY 164
P+ V+AL+FEWAWQHP S + +S + A +++ ML +P W L + + +
Sbjct: 70 PSAVAALRFEWAWQHPQASRRLTHVGPRLRSEAAFAFHLRVLAHMLRVPPWVRLPLTLRW 129
Query: 165 FSTKYSKHSSSCPSLPEHMKV 185
+ CP+ P HM +
Sbjct: 130 LRPDFRH--ELCPAPPAHMPI 148
>sp|Q5PQP5|SLX1_RAT Structure-specific endonuclease subunit SLX1 OS=Rattus norvegicus
GN=Slx1b PE=2 SV=1
Length = 271
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMVLCIYGF 104
FF YLL PR +G Y+GFTVNP RR+RQHN G + GA RT R PW+MVL ++GF
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILHGF 69
Query: 105 PTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESLNIKVNY 164
P+ V+AL+FEWAWQHP S + +S + +++ ML +P W L + V +
Sbjct: 70 PSAVAALRFEWAWQHPQASRRLTHVGPRLRSEASFTFHLRVLAHMLRVPPWVRLPLTVRW 129
Query: 165 FSTKYSKHSSSCPSLPEHMKV 185
+ CP+ P HM +
Sbjct: 130 LRPDFRH--ELCPAPPPHMPI 148
>sp|A7STV9|SLX1_NEMVE Structure-specific endonuclease subunit SLX1 homolog
OS=Nematostella vectensis GN=v1g174298 PE=3 SV=1
Length = 270
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 2/143 (1%)
Query: 45 GFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEI-RCGAVRTKKRRPWEMVLCIYG 103
GF YLL + P+FKGHTYIG+TVNP RRI+QHNG + + GA +T +++PW M+L ++G
Sbjct: 9 GFHGVYLLYCVNPKFKGHTYIGYTVNPNRRIKQHNGGVDKGGAYKTSRKKPWNMILIVHG 68
Query: 104 FPTNVSALQFEWAWQHPMESLAVRQAAATFKSFS-GVANKIKLAFTMLNLPNWESLNIKV 162
FP ++ ALQFEWAWQ P S ++ AA K V ++ +L + W L + +
Sbjct: 69 FPNDIIALQFEWAWQKPTVSRRLKSAATKKKPRERPVQYCFRILSELLRVGPWNRLPLHI 128
Query: 163 NYFSTKYSKHSSSCPSLPEHMKV 185
+ +Y P HM V
Sbjct: 129 RWLMREYEMEFDPRCLPPFHMTV 151
>sp|Q9BQ83|SLX1_HUMAN Structure-specific endonuclease subunit SLX1 OS=Homo sapiens
GN=SLX1A PE=1 SV=1
Length = 275
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVLCIYGF 104
FF YLL L PR++G Y+GFTVN RR++QHNG + GA RT R PWEMVL ++GF
Sbjct: 13 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 72
Query: 105 PTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESLNIKVNY 164
P++V+AL+FEWAWQHP S + + + A +++ ML P W L + + +
Sbjct: 73 PSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRW 132
>sp|Q32PI0|SLX1_BOVIN Structure-specific endonuclease subunit SLX1 OS=Bos taurus GN=SLX1A
PE=2 SV=1
Length = 267
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVLCIYGF 104
FF YLL L PR +G Y+GFTVNP RR++QHNG + GA RT R PWEMVL ++GF
Sbjct: 6 FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGF 65
Query: 105 PTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESLNIKVNY 164
P+ V+AL+FEWAWQHP S + + + A +++ ML P W L + + +
Sbjct: 66 PSAVAALRFEWAWQHPQASRRLTHVGRRLRGEATFAFHLRVLAHMLRAPPWVRLPLTLRW 125
Query: 165 FSTKYSKHSSSCPSLPEHMKV 185
+ + CP P HM +
Sbjct: 126 LRADFRQ--DLCPPPPPHMPL 144
>sp|Q0IH86|SLX1_XENLA Structure-specific endonuclease subunit slx1 OS=Xenopus laevis
GN=slx1a PE=2 SV=1
Length = 282
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Query: 44 KGFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVLCIY 102
+GF+ YLL P++KG YIGFTVNP RRI+QHNG + + GA +T R PW+MVL ++
Sbjct: 6 EGFYGVYLLFCTNPKYKGRIYIGFTVNPERRIQQHNGGKHKGGAWKTSGRGPWDMVLIVH 65
Query: 103 GFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESLNIKV 162
GFP +++AL+FEWAWQHP S + K S + + ML + W L + +
Sbjct: 66 GFPNDIAALRFEWAWQHPHVSRRLTHVPRKTKKQSSFDFHLLVLCHMLRVAPWNRLPLTL 125
Query: 163 NYFSTKYSK 171
+ +Y +
Sbjct: 126 RWLRQEYRR 134
>sp|Q5TXB2|SLX1_ANOGA Structure-specific endonuclease subunit SLX1 homolog OS=Anopheles
gambiae GN=AGAP002259 PE=3 SV=3
Length = 273
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 78/132 (59%), Gaps = 6/132 (4%)
Query: 46 FFACYLLTSLCP--RFKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMVLCIY 102
F+ YLL S P +F G TYIG+TV+P RRI+QHN GE GA RT R PW MVL ++
Sbjct: 10 FYGVYLLVSKSPNPKFAGRTYIGYTVDPNRRIKQHNRGEDAGGARRTSNRGPWTMVLIVH 69
Query: 103 GFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVAN---KIKLAFTMLNLPNWESLN 159
GFP N+SAL+FEWAWQ P S ++Q K +N ++ ML + W L
Sbjct: 70 GFPNNISALRFEWAWQQPRVSRRLKQMPELQKKLRKESNFEYNFRILTEMLRMGPWNRLP 129
Query: 160 IKVNYFSTKYSK 171
+ V +F+ ++ +
Sbjct: 130 LVVRWFADEFHR 141
>sp|Q4CTY5|SLX12_TRYCC Structure-specific endonuclease subunit SLX1 homolog 2
OS=Trypanosoma cruzi (strain CL Brener)
GN=Tc00.1047053511881.30 PE=3 SV=1
Length = 530
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKR-RPWEMVLCIYGF 104
F YLLTSL P+ G YIG+TV+P RR+RQHNGEI GA RTK+R RPWE++ C+ GF
Sbjct: 5 FHCVYLLTSLDPQCAGEYYIGYTVDPIRRLRQHNGEIVSGAWRTKRRGRPWELLCCVSGF 64
Query: 105 PTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESLNIKVNY 164
+ AL+FEW WQHP +S ++ + + + + +L + L + ++
Sbjct: 65 GEDRIALKFEWCWQHPTKSTRLKTQMTQLRGVHRLPYAVGVLHLLLRADLFARLQLTLHI 124
Query: 165 FSTKY-----SKHSSSCPSLPEHMKVQVRSMDELPCYTERDESLLGDEDSLGD 212
F ++ ++ PS+P + + ++E+ ER SL D S GD
Sbjct: 125 FEPEHVGRVVAELQGRVPSIPPLVATSLLRIEEIT--KERFMSLYLDGVSGGD 175
>sp|B3P230|SLX1_DROER Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
erecta GN=slx1 PE=3 SV=2
Length = 294
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 95/177 (53%), Gaps = 25/177 (14%)
Query: 22 TLDPVKDDFEEEDEEQKAKDQQKGFFACYLLTS--LCPRFKGHTYIGFTVNPRRRIRQHN 79
+ DP +D E+ EE A + F+ YLL S L PRF+G Y+GFTVNP+RRIRQHN
Sbjct: 3 SYDP-QDTASEQQEETVA--LKGHFYGVYLLCSQSLDPRFRGKCYVGFTVNPKRRIRQHN 59
Query: 80 -GEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG 138
G GA +T +R PW MV+ ++GFP N ALQFEWAWQ P SL+ R K +
Sbjct: 60 LGCDFGGARKTSRRGPWLMVMIVHGFPNNTVALQFEWAWQQP--SLSTR-----LKMYPE 112
Query: 139 VANKI----------KLAFTMLNLPNWESLNIKVNYFSTKYSKHSSSCPSLPEHMKV 185
+ K+ ++ ML + W L + V + T Y + + LP HM +
Sbjct: 113 LKRKLPRETFFDYNFRILSHMLGVGPWNRLPLSVRWLETDYERPFNM--PLPNHMDI 167
>sp|Q9VN41|SLX1_DROME Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
melanogaster GN=slx1 PE=1 SV=3
Length = 297
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 95/171 (55%), Gaps = 23/171 (13%)
Query: 29 DFEEEDEEQKAKDQQKG-FFACYLLTS--LCPRFKGHTYIGFTVNPRRRIRQHN-GEIRC 84
D ++ +Q+ KG F+ YLL S L PR++G Y+GFTVNP+RRIRQHN G
Sbjct: 5 DPQDTASQQEESVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCDFG 64
Query: 85 GAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKI- 143
GA +T ++ PW MV+ ++GFP N ALQFEWAWQ P SL+ R K + + K+
Sbjct: 65 GARKTSRKGPWLMVMIVHGFPNNTVALQFEWAWQQP--SLSTR-----LKMYPELKRKLP 117
Query: 144 ---------KLAFTMLNLPNWESLNIKVNYFSTKYSKHSSSCPSLPEHMKV 185
++ ML + W L + V + T Y + S +LP+HM++
Sbjct: 118 RETFFDYNFRILSNMLGVGPWNRLPLTVRWLETDYERPFSK--ALPKHMEI 166
>sp|B4I3R2|SLX1_DROSE Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
sechellia GN=slx1 PE=3 SV=2
Length = 298
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 95/173 (54%), Gaps = 27/173 (15%)
Query: 29 DFEEEDEEQKAKDQQKG-FFACYLLTS--LCPRFKGHTYIGFTVNPRRRIRQHNGEIRC- 84
D ++ +Q+ KG F+ YLL S L PR++G Y+GFTVNP+RRIRQHN + C
Sbjct: 5 DPQDTGSQQEETVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHN--LGCD 62
Query: 85 --GAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANK 142
GA +T ++ PW MV+ ++GFP N ALQFEWAWQ P SL+ R K + + K
Sbjct: 63 FGGARKTSRKGPWLMVMIVHGFPNNTVALQFEWAWQQP--SLSTR-----LKMYPELKRK 115
Query: 143 I----------KLAFTMLNLPNWESLNIKVNYFSTKYSKHSSSCPSLPEHMKV 185
+ ++ ML + W L + V + T Y + S +LP HM++
Sbjct: 116 LPRETFFDYNFRILSHMLGVGPWNRLPLTVRWLETDYERPFSK--TLPNHMEI 166
>sp|A4I1H7|SLX1_LEIIN Structure-specific endonuclease subunit SLX1 homolog OS=Leishmania
infantum GN=LinJ25.1380 PE=3 SV=1
Length = 705
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKR-RPWEMVLCIYGF 104
F YLLTSL P+ +G YIG+TVNP RR+RQHNGE+ GA RT +R RPW +V C+ GF
Sbjct: 5 FHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHNGELVNGARRTSRRGRPWTIVCCVSGF 64
Query: 105 PTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESLNIKVNY 164
P + +AL+FEW WQHP S +R A + + ++ + L++ ++
Sbjct: 65 PDDRAALKFEWCWQHPTASARLRHAIDILTGLRRLPYAVATLHLLVRASLFCRLDLTLHI 124
Query: 165 F 165
F
Sbjct: 125 F 125
>sp|B3M0F3|SLX1_DROAN Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
ananassae GN=slx1 PE=3 SV=1
Length = 299
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 23/166 (13%)
Query: 34 DEEQKAKDQQKG-FFACYLLTS--LCPRFKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRT 89
D E+ +KG F+ YLL S L R++G Y+GFTVNP+RRI+QHN G GA +T
Sbjct: 11 DPEKDETIARKGHFYGVYLLCSQSLDSRYRGKCYVGFTVNPKRRIKQHNRGCDFGGAKKT 70
Query: 90 KKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANK------- 142
++ PW+MV+ ++GFP N+ ALQFEWAWQ P +L+ R K F + K
Sbjct: 71 SRKGPWQMVMIVHGFPNNIVALQFEWAWQQP--TLSTR-----LKIFPELKRKNPRESHF 123
Query: 143 ---IKLAFTMLNLPNWESLNIKVNYFSTKYSKHSSSCPSLPEHMKV 185
++ ML + W L +K+ + T Y + LP HM++
Sbjct: 124 DYNFRILNRMLGVGPWNRLALKIRWLETDYERGFEV--PLPRHMEI 167
>sp|Q4D7L5|SLX11_TRYCC Structure-specific endonuclease subunit SLX1 homolog 1
OS=Trypanosoma cruzi (strain CL Brener)
GN=Tc00.1047053509453.60 PE=3 SV=1
Length = 529
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKR-RPWEMVLCIYGF 104
F YLLTSL P+ G YIG+TV+P RR+RQHNGEI GA RTK+R RPWE++ C+ GF
Sbjct: 5 FHCVYLLTSLDPQCAGEYYIGYTVDPIRRLRQHNGEIVSGAWRTKRRGRPWELLCCVSGF 64
Query: 105 PTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESLNIKVNY 164
+ AL+FEW WQHP +S ++ + + + + +L + L + ++
Sbjct: 65 GEDRIALKFEWCWQHPTKSTRLKTQMTQLRGVHRLPYAVGVLHLLLRADLFARLQLTLHI 124
Query: 165 F 165
F
Sbjct: 125 F 125
>sp|B4KBJ0|SLX1_DROMO Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
mojavensis GN=slx1 PE=3 SV=1
Length = 303
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 22/163 (13%)
Query: 36 EQKAKDQQKGFFACYLLTS--LCPRFKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKR 92
+++A Q+ F+ YLL S + R +G Y+GFTVNP+RRIRQHN G GA +T K+
Sbjct: 11 DREALAQKGHFYGVYLLCSQSVDVRHRGKCYVGFTVNPKRRIRQHNRGSSFGGAKKTSKK 70
Query: 93 RPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKI--------- 143
PW+MV+ ++GFP + ALQFEWAWQ P +L+ R K F + K+
Sbjct: 71 GPWQMVMIVHGFPNKIVALQFEWAWQQP--TLSTR-----LKIFDDLRRKLPRETHFDYN 123
Query: 144 -KLAFTMLNLPNWESLNIKVNYFSTKYSKHSSSCPSLPEHMKV 185
++ ML + W L + V + T Y + LP HM++
Sbjct: 124 FRIVNRMLGVGPWHRLPLTVRWLETDYEREFQL--PLPRHMRI 164
>sp|P0CN80|SLX1_CRYNJ Structure-specific endonuclease subunit SLX1 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=SLX1 PE=3 SV=1
Length = 487
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 9/130 (6%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFP 105
F+ACYLL S TY+G T +P RRIRQHNGE++ GA T + RPWEM + +YGFP
Sbjct: 28 FYACYLLRSKATANSNRTYVGSTPDPPRRIRQHNGELKQGAWSTSRHRPWEMQMIVYGFP 87
Query: 106 TNVSALQFEWAWQHPMESLAVR---QAAATFKSFSG------VANKIKLAFTMLNLPNWE 156
+ ++ALQFEWAWQ P S +R + + F+ V K+ +A+ +++L +
Sbjct: 88 SKLAALQFEWAWQKPELSRHLRIRGEDQEYYHIFTKDARRNWVERKVCVAYALISLTPFN 147
Query: 157 SLNIKVNYFS 166
L + V +F+
Sbjct: 148 RLPLHVRFFN 157
>sp|P0CN81|SLX1_CRYNB Structure-specific endonuclease subunit SLX1 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=SLX1 PE=3 SV=1
Length = 487
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 9/130 (6%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFP 105
F+ACYLL S TY+G T +P RRIRQHNGE++ GA T + RPWEM + +YGFP
Sbjct: 28 FYACYLLRSKATANSNRTYVGSTPDPPRRIRQHNGELKQGAWSTSRHRPWEMQMIVYGFP 87
Query: 106 TNVSALQFEWAWQHPMESLAVR---QAAATFKSFSG------VANKIKLAFTMLNLPNWE 156
+ ++ALQFEWAWQ P S +R + + F+ V K+ +A+ +++L +
Sbjct: 88 SKLAALQFEWAWQKPELSRHLRIRGEDQEYYHIFTKDARRNWVERKVCVAYALISLTPFN 147
Query: 157 SLNIKVNYFS 166
L + V +F+
Sbjct: 148 RLPLHVRFFN 157
>sp|B5DXG8|SLX1_DROPS Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=slx1 PE=3 SV=1
Length = 291
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 22/163 (13%)
Query: 36 EQKAKDQQKGFFACYLLTS--LCPRFKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKR 92
E +A + F+ YLL S L R++ Y+GFTVNP+RRI+QHN G GA +T K+
Sbjct: 6 EDEAIAHKGHFYGVYLLCSQSLDSRYRAKCYVGFTVNPKRRIKQHNRGCDFGGAKKTSKK 65
Query: 93 RPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANK---------- 142
PW+MV+ ++GFP N+SALQFEWAWQ P +L+ R K F + K
Sbjct: 66 GPWQMVMIVHGFPNNISALQFEWAWQQP--TLSTR-----LKIFPDLKRKKPKETHFDYN 118
Query: 143 IKLAFTMLNLPNWESLNIKVNYFSTKYSKHSSSCPSLPEHMKV 185
++ ML++ W L + + + T Y + + P +P HM++
Sbjct: 119 FRILNRMLSVGPWHRLALTIRWLETDYER-AFDLP-IPCHMEI 159
>sp|B4GEU1|SLX1_DROPE Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
persimilis GN=slx1 PE=3 SV=1
Length = 291
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 88/163 (53%), Gaps = 22/163 (13%)
Query: 36 EQKAKDQQKGFFACYLLTS--LCPRFKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKR 92
E +A + F+ YLL S L R++ Y+GFTVNP+RRI+QHN G GA +T K+
Sbjct: 6 EDEAIAHKGHFYGVYLLCSQSLDSRYRAKCYVGFTVNPKRRIKQHNRGCDFGGAKKTSKK 65
Query: 93 RPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANK---------- 142
PW+MV+ ++GFP N+SALQFEWAWQ P +L+ R K F + K
Sbjct: 66 GPWQMVMIVHGFPNNISALQFEWAWQQP--TLSTR-----LKIFPDLKRKKPKETHFDYN 118
Query: 143 IKLAFTMLNLPNWESLNIKVNYFSTKYSKHSSSCPSLPEHMKV 185
++ ML + W L + + + T Y + +P HM++
Sbjct: 119 FRILNRMLGVGPWHRLALTIRWLETDYERAFDL--PIPCHMEI 159
>sp|A8PV03|SLX1_BRUMA Structure-specific endonuclease subunit SLX1 homolog OS=Brugia
malayi GN=Bm1_35165 PE=3 SV=1
Length = 333
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 46 FFACYLLTSLCPR--FKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMVLCIY 102
FF Y L S P FK YIG+TVNP RRIRQHN G+ GA +T R PW+MV I+
Sbjct: 69 FFGVYCLLSRSPNRYFKNRCYIGYTVNPNRRIRQHNAGKEFGGAKKTDHRGPWDMVCIIH 128
Query: 103 GFPTNVSALQFEWAWQHPMESLAVRQAAATFK-SFSGVANKIKLAFTMLNLPNWESLNIK 161
GFP +VSAL+FEWAWQ+P +S +R + S + ++++A MLN W L++
Sbjct: 129 GFPNSVSALRFEWAWQNPEKSRRLRLLNLKKRTSETAFGFRLRIACHMLNSDPWRRLSLT 188
Query: 162 VNYF 165
+
Sbjct: 189 FRWL 192
>sp|Q6FML9|SLX1_CANGA Structure-specific endonuclease subunit SLX1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SLX1 PE=3 SV=1
Length = 312
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 79/129 (61%), Gaps = 8/129 (6%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEI-RCGAVRTKK--RRPWEMVLCIY 102
F+ CYLL S+ R YIG T NP RR+RQHNG + R GA RTK+ RPWEMV +Y
Sbjct: 10 FYGCYLLQSISKR--QSFYIGSTPNPVRRLRQHNGSLSRGGAYRTKRDGTRPWEMVAIVY 67
Query: 103 GFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG---VANKIKLAFTMLNLPNWESLN 159
GFP+ ++ALQFE AWQH ++ ++ K+ G + +K+ + ++L + ++
Sbjct: 68 GFPSRIAALQFEHAWQHGYQTRYIKSQDRVVKTRKGGRSIHHKLAMITSLLKNEYFRYMD 127
Query: 160 IKVNYFSTK 168
+ +++F+ K
Sbjct: 128 LTLHFFNQK 136
>sp|B4JGW7|SLX1_DROGR Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
grimshawi GN=slx1 PE=3 SV=1
Length = 286
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 86/155 (55%), Gaps = 19/155 (12%)
Query: 43 QKG-FFACYLLTS--LCPRFKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMV 98
QKG F+ YLL S L R++G Y+GFTVNP+RRI QHN G GA +T ++ PW+MV
Sbjct: 13 QKGRFYGVYLLCSQSLDARYRGKCYVGFTVNPKRRIGQHNRGCDFGGAHKTSRKGPWQMV 72
Query: 99 LCIYGFPTNVSALQFEWAWQHPMES--------LAVRQAAATFKSFSGVANKIKLAFTML 150
+ ++GFP N++ALQFEWAWQ P S L +Q T ++ ++ ML
Sbjct: 73 MIVHGFPNNIAALQFEWAWQQPALSTRLKCYPELRRKQPRETHFDYN-----FRIVNRML 127
Query: 151 NLPNWESLNIKVNYFSTKYSKHSSSCPSLPEHMKV 185
+ W L + V + ++ + LP H+++
Sbjct: 128 GIGPWHRLPLTVRWLESECERGFVV--PLPPHVRI 160
>sp|Q57XV5|SLX1_TRYB2 Structure-specific endonuclease subunit SLX1 homolog OS=Trypanosoma
brucei brucei (strain 927/4 GUTat10.1) GN=Tb927.3.1220
PE=3 SV=1
Length = 511
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKR-RPWEMVLCIYGF 104
F YLLTSL P+ +G YIG+TVNP RR+RQHNGE+ GA RTK+ RPW +++C+ GF
Sbjct: 5 FHCVYLLTSLDPQCEGAHYIGYTVNPIRRLRQHNGELVNGARRTKRNGRPWLLLMCVSGF 64
Query: 105 PTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESLNIKVNY 164
+ AL+FEW WQ+P +S ++ + + + + + + +L + L + ++
Sbjct: 65 GEDRIALKFEWCWQNPSKSTRLKSHVSQLRCVHKLTHAVGVLLLLLRTELFSRLQLTLHI 124
Query: 165 FSTKY 169
F ++
Sbjct: 125 FDREH 129
>sp|Q5CT62|SLX1_CRYPI Structure-specific endonuclease subunit SLX1 homolog
OS=Cryptosporidium parvum (strain Iowa II) GN=cgd2_4280
PE=3 SV=1
Length = 410
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 18/133 (13%)
Query: 49 CYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFPTNV 108
CY L S K +YIG++VNP RR+RQHNGEI+ GA +TK PW + +C+ GFP V
Sbjct: 10 CYFLLSEAK--KKASYIGYSVNPCRRLRQHNGEIKKGAKKTKSGVPWNLGICVGGFPDRV 67
Query: 109 SALQFEWAWQHPMESLAVRQAAATFKSFS----------------GVANKIKLAFTMLNL 152
+AL+FEWAWQHP R ++K + ++ + M L
Sbjct: 68 AALRFEWAWQHPNICKVTRDNIESWKIVKTKKTSENKRILNKRQWSIQQRVSILLCMTTL 127
Query: 153 PNWESLNIKVNYF 165
W+++N+ V F
Sbjct: 128 EPWKNMNLTVFVF 140
>sp|A7TTE6|SLX1_VANPO Structure-specific endonuclease subunit SLX1 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=SLX1 PE=3
SV=1
Length = 319
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 77/131 (58%), Gaps = 16/131 (12%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEI-RCGAVRTKKR--RPWEMVLCIY 102
F+ CYLL S+ K YIG T NP RR+RQHNG + GA RTK+ RPWEMVL +Y
Sbjct: 21 FYCCYLLQSI--NKKQSFYIGSTPNPVRRLRQHNGNLSNGGAYRTKREGTRPWEMVLVVY 78
Query: 103 GFPTNVSALQFEWAWQH-------PMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNW 155
GF + ++ALQFE AWQH PM+ ++ A S V +K+ L +L +
Sbjct: 79 GFTSKIAALQFEHAWQHGYKTHYIPMDDRIMKNA----NSGRTVHHKLGLVRQLLANVYF 134
Query: 156 ESLNIKVNYFS 166
+N+KV++FS
Sbjct: 135 RHMNLKVHFFS 145
>sp|B6JY16|SLX1_SCHJY Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces
japonicus (strain yFS275 / FY16936) GN=slx1 PE=3 SV=1
Length = 273
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFP 105
F+ CYLL S + YIG T +P RR+RQHNGEI+ GA +TK+ RPW++ ++GFP
Sbjct: 2 FYCCYLLVSEKAASRS-VYIGSTPDPARRLRQHNGEIKGGAYKTKRSRPWKVACFVHGFP 60
Query: 106 TNVSALQFEWAWQHPMESLA--VRQAAATFK-SFSGVANKIKLAFTMLNLPNWESLNIKV 162
T ++ALQFEW WQHP + +RQ + + + ++ ML W ++V
Sbjct: 61 TKIAALQFEWVWQHPQSTRHDDLRQHSRVVSVKRQTLLSCVRALGVMLCCEAWSRWGLRV 120
Query: 163 NYF 165
F
Sbjct: 121 AIF 123
>sp|B5VEH8|SLX1_YEAS6 Structure-specific endonuclease subunit SLX1 OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=SLX1 PE=3 SV=1
Length = 304
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 78/129 (60%), Gaps = 8/129 (6%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCG-AVRTKK--RRPWEMVLCIY 102
F+ CYLL S+ R Y+G T NP RR+RQHNG++ G A RTK+ RPWEM++ +
Sbjct: 13 FYCCYLLQSINKR--QSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 103 GFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG---VANKIKLAFTMLNLPNWESLN 159
GFP+ ++ALQFE AWQH ++ + + K +G + +K+ L +L ++ +N
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 160 IKVNYFSTK 168
+ V+ F+ K
Sbjct: 131 LIVDVFNIK 139
>sp|B3LMT5|SLX1_YEAS1 Structure-specific endonuclease subunit SLX1 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=SLX1 PE=3 SV=1
Length = 304
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 78/129 (60%), Gaps = 8/129 (6%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCG-AVRTKK--RRPWEMVLCIY 102
F+ CYLL S+ R Y+G T NP RR+RQHNG++ G A RTK+ RPWEM++ +
Sbjct: 13 FYCCYLLQSINKR--QSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 103 GFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG---VANKIKLAFTMLNLPNWESLN 159
GFP+ ++ALQFE AWQH ++ + + K +G + +K+ L +L ++ +N
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 160 IKVNYFSTK 168
+ V+ F+ K
Sbjct: 131 LIVDVFNIK 139
>sp|Q75EA5|SLX1_ASHGO Structure-specific endonuclease subunit SLX1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SLX1 PE=3 SV=1
Length = 301
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 45 GFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEI-RCGAVRTKKR--RPWEMVLCI 101
F+ CYLL S+ R YIG T NP RR+RQHNG + + GA RTK++ RPWE+ +
Sbjct: 12 AFYCCYLLRSIPKRLS--YYIGSTPNPVRRLRQHNGLLTKGGAYRTKRQGTRPWELAASV 69
Query: 102 YGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG---VANKIKLAFTMLNLPNWESL 158
GFP+ ++ALQFE AWQHP ++ ++ K G + ++ + +L+ P ++ +
Sbjct: 70 SGFPSKIAALQFEHAWQHPYQTRFIKSEDRIVKKKGGGRSIHQRLAVLKLLLHHPFFKVM 129
Query: 159 NIKVNYFS 166
++ V+ FS
Sbjct: 130 SLVVHLFS 137
>sp|Q4Q9W0|SLX1_LEIMA Structure-specific endonuclease subunit SLX1 homolog OS=Leishmania
major GN=LmjF25.1330 PE=3 SV=1
Length = 704
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGE-IRCGAVRTKKRRPWEMVLCIYGF 104
F YLLTSL P+ +G YIG++VNP RR+RQHNGE + ++ RPW +V C+ GF
Sbjct: 5 FHCVYLLTSLDPQCEGDFYIGYSVNPLRRLRQHNGELVNGARRTGRRGRPWTIVCCVSGF 64
Query: 105 PTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESLNIKVNY 164
P + +AL+FEW WQHP S +R + + ++ + L++ ++
Sbjct: 65 PDDRTALKFEWCWQHPTASARLRHTIDILTGLRRLPYAVATLHLLVRASLFCQLDLTLHI 124
Query: 165 FSTKYSKHSSS 175
F + + + +++
Sbjct: 125 FESAFLQEAAA 135
>sp|A8WJ66|SLX1_CAEBR Structure-specific endonuclease subunit SLX1 homolog
OS=Caenorhabditis briggsae GN=giyd-1 PE=3 SV=2
Length = 439
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 43 QKGFFACYLLTSLCPR--FKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVL 99
Q F+ Y L S R +K YIG+TV+P RRI QHNG + GA +T R PW+MV
Sbjct: 164 QNEFYGVYCLISRSERQCYKNRCYIGYTVDPNRRIMQHNGGRFKGGAKKTDSRGPWDMVC 223
Query: 100 CIYGFPTNVSALQFEWAWQHPM--ESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWES 157
++GFP +V+AL+FEWAWQ+P +SL +Q K + A ++++A ++N +
Sbjct: 224 VVHGFPNHVAALRFEWAWQNPAVSKSLKEKQLKKERKE-TPFAYQLRIACELMNSEAFSR 282
Query: 158 LNIKVNYFSTKYSKHSSSCPSLPEHMKVQ 186
+ + +TK + P H+K++
Sbjct: 283 FALTFRWLNTKEELPFPISCTPPNHVKLR 311
>sp|A6ZLG6|SLX1_YEAS7 Structure-specific endonuclease subunit SLX1 OS=Saccharomyces
cerevisiae (strain YJM789) GN=SLX1 PE=3 SV=1
Length = 304
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 77/129 (59%), Gaps = 8/129 (6%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCG-AVRTKK--RRPWEMVLCIY 102
F+ CYLL S+ R Y+G T NP RR+RQHNG++ G A RTK+ RPWEM++ +
Sbjct: 13 FYCCYLLQSINKR--QSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 103 GFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG---VANKIKLAFTMLNLPNWESLN 159
GFP+ ++ALQFE AWQH ++ + + K +G + +K+ L +L ++ +N
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 160 IKVNYFSTK 168
+ V F+ K
Sbjct: 131 LIVEVFNIK 139
>sp|P38324|SLX1_YEAST Structure-specific endonuclease subunit SLX1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SLX1 PE=1
SV=1
Length = 304
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 77/129 (59%), Gaps = 8/129 (6%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCG-AVRTKK--RRPWEMVLCIY 102
F+ CYLL S+ R Y+G T NP RR+RQHNG++ G A RTK+ RPWEM++ +
Sbjct: 13 FYCCYLLQSINKR--QSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 103 GFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG---VANKIKLAFTMLNLPNWESLN 159
GFP+ ++ALQFE AWQH ++ + + K +G + +K+ L +L ++ +N
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 160 IKVNYFSTK 168
+ V F+ K
Sbjct: 131 LIVEVFNIK 139
>sp|A6RYJ8|SLX1_BOTFB Structure-specific endonuclease subunit slx1 OS=Botryotinia
fuckeliana (strain B05.10) GN=slx1 PE=3 SV=2
Length = 425
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 104/209 (49%), Gaps = 44/209 (21%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKK--RRPWEMVLCIYG 103
F+ CYLL S Y+G T NP RR+RQHNG ++ GAVRT + RPWEM + G
Sbjct: 15 FYGCYLLRSTI--RHSALYVGSTPNPVRRLRQHNGLVKGGAVRTSRGNLRPWEMACIVTG 72
Query: 104 FPTNVSALQFE-WAWQHPMESLAV----RQAAATFKSFSGVANKIKLAF--------TML 150
FPT+++ALQF+ WAWQ+P +L + R + AT K SG + + +L
Sbjct: 73 FPTSIAALQFDRWAWQNPHITLHIPPSSRISHATQKKRSGHPKRPRHTLQSLLSNLHILL 132
Query: 151 NLPNWESLNIKVNYFS-------TKYSKHSSSCPSLPEHMKVQVRSMDELPCYTE--RDE 201
+P++ +++ +F+ K+SK ++ SL D LP T+ E
Sbjct: 133 TVPSFSRWPLEIKFFAPDVHRAWLKWSKAATG--SL----------RDTLPIITDFPPAE 180
Query: 202 SLLGDEDS------LGDEDYNEASENSGS 224
S + DED G E N A E++ S
Sbjct: 181 SQVNDEDGEITDRPYGIEALNVAYEDTKS 209
>sp|Q4PDF6|SLX1_USTMA Structure-specific endonuclease subunit SLX1 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=SLX1 PE=3 SV=1
Length = 658
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFP 105
F+ACY L SL G TYIG T P RR RQHNG + GA +T + RPWEM +YGF
Sbjct: 13 FYACYFLRSLS--TPGTTYIGSTPAPPRRKRQHNGHLTQGAYKTSRARPWEMECIVYGFS 70
Query: 106 TNVSALQFEWAWQHP 120
+ ++ALQFEWAW P
Sbjct: 71 SKIAALQFEWAWAKP 85
>sp|P91351|SLX1_CAEEL Structure-specific endonuclease subunit SLX1 homolog
OS=Caenorhabditis elegans GN=giyd-1 PE=3 SV=1
Length = 443
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 25/239 (10%)
Query: 43 QKGFFACYLLTSLC--PRFKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVL 99
Q F+ Y L S P +K YIG+TV+P RRI QHNG + GA +T R PW+MV
Sbjct: 169 QNEFYGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRDKGGAKKTDSRGPWDMVC 228
Query: 100 CIYGFPTNVSALQFEWAWQHPM--ESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWES 157
++GFP +V+AL FEWAWQ+P+ +SL +Q K + A ++++A ++N +
Sbjct: 229 VVHGFPNHVAALHFEWAWQNPLVSKSLKEKQLRKERKE-TPFAFQLRIACELMNSSAFCR 287
Query: 158 LNIKVNYF-STKYSKHSSSCPSLPEHMKVQV----RSMDELPCYTERDESLLGDEDSLGD 212
+ + +T+ +SC P+H K++ + M +P ++R++ L E +
Sbjct: 288 FALTFRWLITTEELPFPTSCVP-PDHTKLRFGKVKKEMSLVP--SKREDYLEMGECRICG 344
Query: 213 EDYNEASENSGSLEETC---------GDVTINFSSDYSFSIY--EAADEQCGQFKQYGN 260
+D + + TC + + +++ +Y +A CGQF +G+
Sbjct: 345 KDIEKLWSLVRCISATCPSHFHSKCLSENGLKLKNEHVDHVYPLKANCPTCGQFYLWGD 403
>sp|A8B2Z8|SLX1_GIAIC Structure-specific endonuclease subunit SLX1 homolog OS=Giardia
intestinalis (strain ATCC 50803 / WB clone C6)
GN=GL50803_16475 PE=3 SV=1
Length = 359
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 44 KGFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYG 103
+G FACY L + YIGFT NP RRIRQHN +I GA +T + PW MVL + G
Sbjct: 8 RGLFACYCLVAESSESPKRCYIGFTNNPLRRIRQHNRKIAGGARKTSRYGPWRMVLFVGG 67
Query: 104 FPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLA 146
F T VSAL+FE+ W +P S V +AT + K++LA
Sbjct: 68 FSTKVSALKFEYIWTYPTRSRYVNCISAT-------SQKLRLA 103
>sp|Q6BWW4|SLX1_DEBHA Structure-specific endonuclease subunit SLX1 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=SLX1 PE=3 SV=2
Length = 346
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 18/189 (9%)
Query: 28 DDFEEEDEEQKAK---DQQKGFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIR- 83
DD EE D ++K + F+ YLL S+ P+ K YIG T NP+RR+RQHNGE++
Sbjct: 2 DDNEEYDTKRKTRCGLHVHPDFYGVYLLRSV-PKPKSF-YIGSTPNPQRRLRQHNGELKN 59
Query: 84 CGAVRTKKR--RPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVR-QAAATFKSFSGVA 140
GA RTKK RPWEM+ +Y FP+ ALQFE A QHP ++ ++ + T K SG
Sbjct: 60 GGAYRTKKSGFRPWEMICLVYNFPSKNVALQFEHALQHPYQTRHIKSELRITHKRNSGNT 119
Query: 141 NKIKLAFTMLNLPN--WESLNIKVNYFSTKYSKHSSSC-----PSLPEHMKVQVRSMDEL 193
KL L L + + + +KV F + HS+ C ++ ++++V V ++
Sbjct: 120 LHHKLGNIRLLLGSSFFSRMGLKVLLFDPEV--HSAWCINKFGVNVTDNVQVNVTRFEDY 177
Query: 194 PCYTERDES 202
DES
Sbjct: 178 FSRDNNDES 186
>sp|Q9P7M3|SLX1_SCHPO Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=slx1 PE=1 SV=1
Length = 271
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 50/74 (67%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFP 105
F+ CYLL S + G YIG T +P RR+RQHNGEI GA +TK RPW + +YGFP
Sbjct: 6 FYCCYLLKSNRTQSSGAVYIGSTPDPPRRLRQHNGEIVGGASKTKHGRPWSISCLVYGFP 65
Query: 106 TNVSALQFEWAWQH 119
VSAL+FEW WQ+
Sbjct: 66 NKVSALKFEWNWQN 79
>sp|Q6CKL8|SLX1_KLULA Structure-specific endonuclease subunit SLX1 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=SLX1 PE=3 SV=1
Length = 288
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 8/126 (6%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIR-CGAVRTKKR--RPWEMVLCIY 102
F+ YLL S+ P+ YIG + +P RR+RQHNG +R GA RTK+ RPW+MV IY
Sbjct: 11 FYCSYLLRSI-PK-PNSFYIGSSPDPVRRLRQHNGAVRRGGAYRTKRNGTRPWKMVCFIY 68
Query: 103 GFPTNVSALQFEWAWQHPMESLAV---RQAAATFKSFSGVANKIKLAFTMLNLPNWESLN 159
GF + ++ALQFE AWQH ++ + + + +G+A K+ A ++ P ++ +N
Sbjct: 69 GFTSKIAALQFEHAWQHSYKTRFIENNERLVTKKNTRNGIATKLGNARLLMKHPYFDKMN 128
Query: 160 IKVNYF 165
+ + +F
Sbjct: 129 LHIRFF 134
>sp|A9V196|SLX1_MONBE Structure-specific endonuclease subunit SLX1 homolog OS=Monosiga
brevicollis GN=8836 PE=3 SV=1
Length = 420
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 65 IGFTVNPRRRIRQHNGEIRCGAVRTKKRR-PWEMVLCIYGFPTNVSALQFEWAWQHPMES 123
IGFT +P RR+RQHN EI GAVRT + + W+M +YGFP V+AL+FEWAWQHP++S
Sbjct: 43 IGFTTDPVRRLRQHNSEIGGGAVRTTRAKGSWDMAAIVYGFPNKVAALRFEWAWQHPLKS 102
Query: 124 LAVRQA 129
+R A
Sbjct: 103 RRLRDA 108
>sp|B0Y2U0|SLX1_ASPFC Structure-specific endonuclease subunit slx1 OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=slx1 PE=3 SV=1
Length = 423
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRT--KKRRPWEMVLCIYG 103
F+ CYLL S YIG T NP RR+ QHNG ++ GA RT +K RPWEMVL + G
Sbjct: 15 FYCCYLLRSTVRH--ASLYIGSTPNPARRLIQHNGVVKGGARRTAAEKLRPWEMVLVVEG 72
Query: 104 FPTNVSALQFEWAWQHPMESLAVR 127
F + ++ALQFEWAWQ+P S +R
Sbjct: 73 FMSRLAALQFEWAWQNPWYSRHLR 96
>sp|Q4WEL6|SLX1_ASPFU Structure-specific endonuclease subunit slx1 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=slx1 PE=3 SV=1
Length = 423
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 46 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRT--KKRRPWEMVLCIYG 103
F+ CYLL S YIG T NP RR+ QHNG ++ GA RT +K RPWEMVL + G
Sbjct: 15 FYCCYLLRSTVRH--ASLYIGSTPNPARRLIQHNGVVKGGARRTAAEKLRPWEMVLVVEG 72
Query: 104 FPTNVSALQFEWAWQHPMESLAVR 127
F + ++ALQFEWAWQ+P S +R
Sbjct: 73 FMSRLAALQFEWAWQNPWYSRHLR 96
>sp|A8PWH1|SLX1_MALGO Structure-specific endonuclease subunit SLX1 OS=Malassezia globosa
(strain ATCC MYA-4612 / CBS 7966) GN=SLX1 PE=3 SV=1
Length = 443
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
Query: 47 FACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFPT 106
+ CY L SL TYIG T +P RR+RQHNG ++ GA T+ RPW M + +YGFP+
Sbjct: 15 YVCYCLRSLS--RPNQTYIGSTPDPIRRLRQHNGLVKQGAFYTRMARPWTMDVVVYGFPS 72
Query: 107 NVSALQFEWAWQHPMESLAVR----------QAAATFKSFSGVANK 142
++ALQFEW+WQ P S +R +++AT ++G ++K
Sbjct: 73 KLAALQFEWSWQKPHASRHLRVMHDDGTRPNKSSATAAVYAGRSSK 118
>sp|B6HK90|SLX1_PENCW Structure-specific endonuclease subunit slx1 OS=Penicillium
chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin
54-1255) GN=slx1 PE=3 SV=1
Length = 403
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 45 GFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTK--KRRPWEMVLCIY 102
++ CYLL S YIG T NP RR+ QHNG + GA RT K RPWEM L +
Sbjct: 12 AYYCCYLLRSTV--RHASLYIGSTPNPIRRLPQHNGVAKGGAKRTARDKLRPWEMTLVVE 69
Query: 103 GFPTNVSALQFEWAWQHPMES 123
GF + V ALQFEWAWQHP S
Sbjct: 70 GFTSRVGALQFEWAWQHPERS 90
>sp|A2QUJ2|SLX1_ASPNC Structure-specific endonuclease subunit slx1 OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=slx1 PE=3 SV=1
Length = 424
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 45 GFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKK--RRPWEMVLCIY 102
++ CYLL S R YIG T +P RR+ QHNGE + GA +T K +RPWEMVL +
Sbjct: 14 AYYCCYLLRSTKQRTS--LYIGSTPHPARRLAQHNGESKGGARKTAKDDKRPWEMVLLVE 71
Query: 103 GFPTNVSALQFEWAWQHPMES 123
GF + V ALQFEWAWQ+P S
Sbjct: 72 GFTSRVGALQFEWAWQNPRMS 92
>sp|A1C4Z4|SLX1_ASPCL Structure-specific endonuclease subunit slx1 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=slx1 PE=3 SV=1
Length = 434
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 45 GFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRT--KKRRPWEMVLCIY 102
F+ CYLL S YIG T NP RR+ QHNG ++ GA RT +K RPWEMV+ +
Sbjct: 14 AFYCCYLLRSTV--RHASLYIGSTPNPARRLTQHNGVVKGGARRTAAEKLRPWEMVMIVE 71
Query: 103 GFPTNVSALQFEWAWQHPMESLAVR 127
GF + + ALQFEWAWQ+P S +R
Sbjct: 72 GFMSRLGALQFEWAWQNPGYSRHLR 96
>sp|B9WGW9|SLX1_CANDC Structure-specific endonuclease subunit SLX1 OS=Candida
dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 /
NCPF 3949 / NRRL Y-17841) GN=SLX1 PE=3 SV=1
Length = 286
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 7/124 (5%)
Query: 46 FFACYLLTSLC-PRFKGHTYIGFTVNPRRRIRQHNGEIRCG-AVRTKK--RRPWEMVLCI 101
F+ Y+L S+ PR TYIG T +P+RR+RQHNG+++ G A RTKK RPW MV+ +
Sbjct: 16 FYGVYILKSIPKPR---RTYIGSTPDPKRRLRQHNGDLKVGGAYRTKKDGSRPWTMVVLV 72
Query: 102 YGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESLNIK 161
+GFP+ ++ALQFE + QH ++ + A S + KLA L +++ +++K
Sbjct: 73 HGFPSRIAALQFEHSLQHAYQTRHINNDARITSSSRQSSMHSKLANIRLLTTSFDKMSLK 132
Query: 162 VNYF 165
+ F
Sbjct: 133 IAIF 136
>sp|Q0CE14|SLX1_ASPTN Structure-specific endonuclease subunit slx1 OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=slx1 PE=3 SV=1
Length = 390
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 41 DQQK---GFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTK-KRRPWE 96
DQ K ++ CYLL S + G Y+G T NP RR+ QHNG + GA +T K RPWE
Sbjct: 7 DQTKPIPAYYCCYLLRSTVNKRAG-LYVGSTPNPPRRLPQHNGLSKGGAKKTATKNRPWE 65
Query: 97 MVLCIYGFPTNVSALQFEWAWQH 119
MVL + GF + +ALQFEWAWQH
Sbjct: 66 MVLLVEGFMSRTAALQFEWAWQH 88
>sp|Q5AU18|SLX1_EMENI Structure-specific endonuclease subunit slx1 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=slx1 PE=3 SV=1
Length = 409
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 64 YIGFTVNPRRRIRQHNGEIRCGAVRT--KKRRPWEMVLCIYGFPTNVSALQFEWAWQHP 120
YIG T +P RR+ QHNG + GA RT +KRRPWEMV+ + GF + ++ALQFEWAWQHP
Sbjct: 11 YIGSTPDPARRLAQHNGLCKGGARRTADEKRRPWEMVMVVEGFMSKIAALQFEWAWQHP 69
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,089,478
Number of Sequences: 539616
Number of extensions: 5569597
Number of successful extensions: 15815
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 15674
Number of HSP's gapped (non-prelim): 112
length of query: 382
length of database: 191,569,459
effective HSP length: 119
effective length of query: 263
effective length of database: 127,355,155
effective search space: 33494405765
effective search space used: 33494405765
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)