BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016816
(382 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04212|Y2090_ARATH Putative ABC1 protein At2g40090 OS=Arabidopsis thaliana
GN=At2g40090 PE=2 SV=2
Length = 538
Score = 612 bits (1579), Expect = e-174, Method: Compositional matrix adjust.
Identities = 298/379 (78%), Positives = 336/379 (88%), Gaps = 3/379 (0%)
Query: 1 MAARSIWRYGGKLAVAATALGGG---AALASSDDPATALKLCSAVPVRLVRDSVTAASIA 57
MAARS+WR KL V TAL GG A +ASSDDP+T LKLC+++PVRL R++VTAASIA
Sbjct: 1 MAARSLWRTRTKLLVVGTALCGGSGAAFIASSDDPSTTLKLCTSIPVRLYRNTVTAASIA 60
Query: 58 FDYEYSLWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQE 117
FDYEYSL GL EGSSERAKVKHEVHLRSA+KLQELCFKNGGIYIKLGQHIGQLEYLVP+E
Sbjct: 61 FDYEYSLLGLAEGSSERAKVKHEVHLRSAQKLQELCFKNGGIYIKLGQHIGQLEYLVPEE 120
Query: 118 YVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRD 177
YV+ MRESMLNKCP+SSY+QVC+VFKKE+G+ PDQVF +FDPVPIASASLAQVHVAR D
Sbjct: 121 YVRTMRESMLNKCPISSYEQVCEVFKKEVGEMPDQVFAEFDPVPIASASLAQVHVARTHD 180
Query: 178 GQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLE 237
G+KVAVKVQH HMTDTAAAD A V +LVNTLH +FPSFDYRWL+ EM ESLPKELDFL+E
Sbjct: 181 GKKVAVKVQHAHMTDTAAADTAAVGVLVNTLHRIFPSFDYRWLLDEMSESLPKELDFLVE 240
Query: 238 AKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDP 297
AKN+EK L+NF KLSPHIA Y+YAP +YWNLSTSKLL MEF+DGAQVNDV IRKLGI P
Sbjct: 241 AKNNEKCLDNFRKLSPHIAEYVYAPTIYWNLSTSKLLTMEFMDGAQVNDVDKIRKLGIQP 300
Query: 298 HEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKE 357
+EVS+LVSQ FAEMMFKHGFVHCDPHAANL+VRP PS K++I GKRKPQL+++DHGLYKE
Sbjct: 301 YEVSKLVSQTFAEMMFKHGFVHCDPHAANLIVRPDPSGKRNIYGKRKPQLVILDHGLYKE 360
Query: 358 LDATTKFNYAALWKVLMCS 376
LD T+FNYA+LWK L+ S
Sbjct: 361 LDFNTRFNYASLWKALVFS 379
>sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus
gallus GN=ADCK1 PE=2 SV=1
Length = 519
Score = 276 bits (706), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/334 (41%), Positives = 216/334 (64%), Gaps = 19/334 (5%)
Query: 44 VRLVRDSVTAASIAFDYEYSLWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKL 103
VR+ R T A I +DY SL +P GS E +K +VHLRSA +L+ELC N G +IK+
Sbjct: 34 VRVGRAIATTAVITYDYLTSLRNVPYGSEEYDFLKSQVHLRSAERLRELCCANRGTFIKV 93
Query: 104 GQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIA 163
GQH+G L+YL+P+EY + ++ + ++ P S+ ++ V +++LGK ++F F+ P+
Sbjct: 94 GQHLGALDYLLPEEYTRTLK-VLHSQAPQSTRQEIEQVIREDLGKEIKELFVSFEDTPLG 152
Query: 164 SASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAE 223
+ASLAQVH A +DG+ VAVK+QH + ++ D +E+L+ + +FP F++ WLV E
Sbjct: 153 AASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFLMEVLLLVVKQIFPDFEFMWLVEE 212
Query: 224 MRESLPKELDFLLEAKNSEKV---LENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVD 280
+++LP ELDFL E +N+EKV L+NF ++ P++YW LST ++L+MEF++
Sbjct: 213 AKKNLPLELDFLNEGRNAEKVAQMLKNF--------EFLKVPRIYWELSTRRVLLMEFME 264
Query: 281 GAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSIL 340
G QVND + K GID +E+SR + + ++EM+F +GFVHCDPH N+LV+ P K+
Sbjct: 265 GGQVNDKAYMEKNGIDVNEISRNLGKLYSEMIFVNGFVHCDPHPGNVLVKKCPDSGKAY- 323
Query: 341 GKRKPQLILIDHGLYKELDATTKFNYAALWKVLM 374
+IL+DHGLY+ L + + +Y LW L+
Sbjct: 324 ------IILLDHGLYQVLSESFRMDYCRLWLALI 351
>sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo
sapiens GN=ADCK1 PE=2 SV=2
Length = 530
Score = 275 bits (703), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 216/341 (63%), Gaps = 26/341 (7%)
Query: 44 VRLVRDSVTAASIAFDYEYSLWGLPEGSSERAKVKH-------EVHLRSARKLQELCFKN 96
VR+ R T A I++DY SL +P GS E +++ +VHLRSAR+L ELC N
Sbjct: 37 VRVGRAVATTAVISYDYLTSLKSVPYGSEEYLQLRSKSWPVFLQVHLRSARRLCELCCAN 96
Query: 97 GGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDD 156
G +IK+GQH+G L+YL+P+EY ++ + ++ P SS ++ V +++LGK +F
Sbjct: 97 RGTFIKVGQHLGALDYLLPEEYTSTLK-VLHSQAPQSSMQEIRQVIREDLGKEIHDLFQS 155
Query: 157 FDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFD 216
FD P+ +ASLAQVH A DG+ VAVKVQH + ++ D +E+LV + LFP F+
Sbjct: 156 FDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLFPEFE 215
Query: 217 YRWLVAEMRESLPKELDFLLEAKNSEKV---LENFWKLSPHIANYIYAPKVYWNLSTSKL 273
+ WLV E +++LP ELDFL E +N+EKV L +F +++ P+++W+LST ++
Sbjct: 216 FMWLVDEAKKNLPLELDFLNEGRNAEKVSQMLRHF--------DFLKVPRIHWDLSTERV 267
Query: 274 LIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVP 333
L+MEFVDG QVND + + ID +E+SR + + ++EM+F +GFVHCDPH N+LVR P
Sbjct: 268 LLMEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGNVLVRKHP 327
Query: 334 SEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKVLM 374
G K +++L+DHGLY+ L + NY LW+ L+
Sbjct: 328 -------GTGKAEIVLLDHGLYQMLTEEFRLNYCHLWQSLI 361
>sp|Q5M7P6|ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
tropicalis GN=adck1 PE=2 SV=1
Length = 523
Score = 272 bits (695), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 217/336 (64%), Gaps = 19/336 (5%)
Query: 44 VRLVRDSVTAASIAFDYEYSLWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKL 103
VR+ R +T A+I +DY L + G+ E +K +VH RSA +L +LC N G +IK+
Sbjct: 37 VRIGRAVLTTAAITWDYLTELRHVKAGTEEYESIKSQVHFRSAHRLLDLCCANRGTFIKV 96
Query: 104 GQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIA 163
GQH+G LEYLVP EY + + + ++ P + + V V +++LGK +VF +F+ P+
Sbjct: 97 GQHLGALEYLVPPEYTKTL-SVLHSQAPCTPFPDVVQVIREDLGKEISEVFVEFEEKPLG 155
Query: 164 SASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAE 223
+ASLAQVH A +DG+KVAVKVQH + +A D +E+L++ + +FP F++ WL+ E
Sbjct: 156 AASLAQVHRAVLQDGRKVAVKVQHPKVQAQSARDILLMEVLLHAVKKIFPQFEFMWLIEE 215
Query: 224 MRESLPKELDFLLEAKNSEK---VLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVD 280
+++LP ELDF E +N+EK ++ +F +++ P++YW LST ++L+ME+++
Sbjct: 216 AKKNLPLELDFENEGRNAEKMSAIVSSF--------SFLRIPRIYWELSTKRVLVMEYME 267
Query: 281 GAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSIL 340
G QVND + +++ ID ++V+R + Q ++EM+F HGFVHCDPH N+LVR P
Sbjct: 268 GGQVNDREYMKRNQIDINQVARALGQLYSEMIFVHGFVHCDPHPGNVLVRQNPE------ 321
Query: 341 GKRKPQLILIDHGLYKELDATTKFNYAALWKVLMCS 376
P++IL+DHGLY+ L + + +Y +LW+ L+ +
Sbjct: 322 -TLVPEIILLDHGLYQVLTESFRLDYCSLWQALIAA 356
>sp|Q9D0L4|ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 OS=Mus
musculus GN=Adck1 PE=2 SV=1
Length = 525
Score = 271 bits (692), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 142/334 (42%), Positives = 213/334 (63%), Gaps = 19/334 (5%)
Query: 44 VRLVRDSVTAASIAFDYEYSLWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKL 103
VR+ R T A I++DY SL +P GS E + + +VHLRSAR+L ELC N G +IK+
Sbjct: 37 VRVGRAVATTAVISYDYLTSLRSVPYGSEEYLQRRSQVHLRSARRLFELCCANRGTFIKV 96
Query: 104 GQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIA 163
GQH+G L+YL+P+EY ++ + ++ P SS +V V +++LGK +F FD P+
Sbjct: 97 GQHLGALDYLLPEEYTSTLK-VLHSQAPQSSMQEVRQVIREDLGKEIHDLFLSFDDTPLG 155
Query: 164 SASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAE 223
+ASLAQVH A DG+ VAVKVQH + ++ D +E+LV + LFP F++ WLV E
Sbjct: 156 AASLAQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLFPDFEFMWLVDE 215
Query: 224 MRESLPKELDFLLEAKNSEKV---LENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVD 280
+++LP ELDFL E +N+EKV L +F +++ P+++W LST ++L+MEFV+
Sbjct: 216 AKKNLPLELDFLNEGRNAEKVAHMLRHF--------DFLKVPQIHWELSTKRVLLMEFVE 267
Query: 281 GAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSIL 340
G QVND + K ID +E+S + + ++EM+F +GFVHCDPH N+LVR P K+
Sbjct: 268 GGQVNDRAYMEKNQIDVNEISCHLGKMYSEMIFVNGFVHCDPHPGNVLVRKRPDTGKA-- 325
Query: 341 GKRKPQLILIDHGLYKELDATTKFNYAALWKVLM 374
+++L+DHGLY+ L + +Y LW+ L+
Sbjct: 326 -----EIVLLDHGLYQVLTEEFRLDYCHLWQSLI 354
>sp|Q6INL7|ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
laevis GN=adck1 PE=2 SV=1
Length = 520
Score = 269 bits (688), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/333 (39%), Positives = 214/333 (64%), Gaps = 13/333 (3%)
Query: 44 VRLVRDSVTAASIAFDYEYSLWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKL 103
VR+ R +T A+I +DY L + G+ E +K +VHLRSA +L +LC N G +IK+
Sbjct: 37 VRIGRAVLTTAAITWDYFTKLRHVEAGTEEYENIKSQVHLRSAHRLLDLCCFNRGTFIKV 96
Query: 104 GQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIA 163
GQH+ LEYLVP EY + + + ++ P + + V V +++LGK +VF++F+ P+
Sbjct: 97 GQHLAALEYLVPPEYTKTL-SVLHSQAPCTPFTDVVQVIREDLGKEISEVFEEFEKTPLG 155
Query: 164 SASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAE 223
+ASLAQVH A +DG+KVAVKVQH + ++ D +E+L++ + +FP F++ WL+ E
Sbjct: 156 AASLAQVHRAVLQDGRKVAVKVQHPKVQAQSSRDILIMEVLLHVVKKIFPQFEFMWLIEE 215
Query: 224 MRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQ 283
+++LP ELDF E +N+EK+ S ++ P++YW LST ++L+ME+++G Q
Sbjct: 216 AKKNLPLELDFQNEGRNAEKMSSIVSSFS-----FLRIPRIYWELSTKRVLVMEYMEGGQ 270
Query: 284 VNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKR 343
VND + +++ ID ++VS + + ++EM+F HGFVHCDPH N+LVR P
Sbjct: 271 VNDREYMKRNQIDVNKVSHALGKLYSEMIFVHGFVHCDPHPGNVLVRQNPENC------- 323
Query: 344 KPQLILIDHGLYKELDATTKFNYAALWKVLMCS 376
P++IL+DHGLY+ L + + +Y +LW+ L+ +
Sbjct: 324 APEIILLDHGLYQVLTESFRLDYCSLWQALIAA 356
>sp|Q54TR5|ABKB_DICDI Probable serine/threonine-protein kinase abkB OS=Dictyostelium
discoideum GN=abkB PE=3 SV=1
Length = 668
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 214/375 (57%), Gaps = 23/375 (6%)
Query: 5 SIWRYGGKLAVAA-TALGGGAALASSDDPATALKLCSAVPVRLVRDSVTAASIAFDYEYS 63
SI+ G L ++ + L G L DP + +R +R I F Y+Y
Sbjct: 165 SIFSIKGWLTISILSVLALGTKLVI--DPPQNIDKLDLAFIRNLRVLYAGFKITFYYKYY 222
Query: 64 LWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMR 123
L GL G A+ H +A+ + +LC++N GI+IK+ Q I L++++PQEY++ +
Sbjct: 223 LMGLNRGDEGFAENIQIAHKLAAKAMVDLCYQNKGIFIKVAQIIASLDHILPQEYIKSL- 281
Query: 124 ESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVAR----NRDGQ 179
+ P ++++V +FK E GK PD +F DF+ +PI SASLAQVH A+ N +
Sbjct: 282 SIFQDHAPFVTFEEVEKLFKIETGKHPDDMFIDFERLPINSASLAQVHKAKLKLENDEII 341
Query: 180 KVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAK 239
+VAVKVQ+ + + D +++ ++ + FPSF + W++ E L +ELDF+ EAK
Sbjct: 342 EVAVKVQYPGLMNKFQKDMDSLDNVLTYITLFFPSFQFSWILGEASSCLSQELDFVNEAK 401
Query: 240 NSEKVLENFWKLSPHIANY-IYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPH 298
NSEK+ + F I N + PKVYWN +T ++L MEF+ G ++++ + + KLGID
Sbjct: 402 NSEKMKQLF------IGNQQLSIPKVYWNHTTKRILTMEFIHGVRIDNREGLDKLGIDLK 455
Query: 299 EVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKEL 358
E+ L S FA+ +F HGF+H DPH NLLVR P+ KP L+L+DHGLYK++
Sbjct: 456 ELYYLFSDIFAQQIFVHGFLHSDPHPGNLLVRKTPN--------GKPDLVLLDHGLYKKI 507
Query: 359 DATTKFNYAALWKVL 373
D + ++ LWK L
Sbjct: 508 DENVRLDFCHLWKSL 522
>sp|Q54P00|ABKD_DICDI Probable serine/threonine-protein kinase abkD OS=Dictyostelium
discoideum GN=abkD PE=2 SV=1
Length = 695
Score = 234 bits (597), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 206/366 (56%), Gaps = 14/366 (3%)
Query: 12 KLAVAATALGGGAALASSDDPATALKLCSAVPVRLVRDSVTAASIAFDYEYSLWGLPEGS 71
K +A+ + S + P + V VR R A I +Y+ L PE S
Sbjct: 175 KKTIASILAAIALIIYSYETPDSYFGSMMNVIVRFYRAMKCATKIMINYKI-LSYTPEKS 233
Query: 72 SERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCP 131
SE + H SA + +LC NGG+YIK GQ+I L +++P +Y + + + ++ P
Sbjct: 234 SEYLEKSKICHQESADLILDLCLTNGGLYIKAGQYIASLNHILPIQYTKTL-SVLQDQAP 292
Query: 132 VSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMT 191
+ +V VF K+LG P+ F DFD +PIA+ASLAQVH A ++G++VAVKVQ+ +
Sbjct: 293 WRDFYEVESVFLKDLGNAPNHYFSDFDRLPIAAASLAQVHRAITKEGEEVAVKVQYVDLQ 352
Query: 192 DTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKL 251
D T +L+ ++ FP F++ W+ EM+ L KELDF EA N+E+ ++ L
Sbjct: 353 RNFDGDIFTHNVLLTLVNMAFPDFEFNWMAEEMKNVLIKELDFSQEADNAERAAQD---L 409
Query: 252 SPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEM 311
S + N Y PKV+ S+ ++L EF+ G ++N+V++IR +G+ VS+ + E
Sbjct: 410 SSN--NNAYIPKVFRPYSSKRILTTEFIHGCKINNVQAIRSMGLSEKTVSQRFMEIMCEQ 467
Query: 312 MFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWK 371
+F H FVH DPHA N+LVR P+ +PQ++L+DHGLY+E D + N+ L+K
Sbjct: 468 IFIHAFVHVDPHAGNVLVRQHPNH------PNQPQIVLLDHGLYREYDEEFRLNFCNLYK 521
Query: 372 -VLMCS 376
+++C+
Sbjct: 522 NLVLCN 527
>sp|O60111|YG62_SCHPO ABC1 family protein C15C4.02 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC15C4.02 PE=3 SV=2
Length = 557
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/363 (35%), Positives = 202/363 (55%), Gaps = 18/363 (4%)
Query: 12 KLAVAATALGGGAALASSD-DPATALKLCSAVPVRLVRDSVTAASIAF-DYEYSLWGLPE 69
K AV ++ A++A D DP + S R+V A + F DY+ L
Sbjct: 39 KPAVVGASITLMASVALVDFDPVKHAGVSSKRAYRVV----LAGFLCFSDYKKVLGSSYA 94
Query: 70 GSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNK 129
ER E HLR A + ++ +NGGIYIK+GQH+ + Y++P+E+ M + + ++
Sbjct: 95 SEEERQLALSECHLRCAERSLKVFEENGGIYIKIGQHLSAMGYVIPKEWTNTMVK-LQDR 153
Query: 130 CPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQK-VAVKVQHT 188
CP +S + +F+ + GK D+ FD+FDP+ + ASLAQVH AR +D VAVKVQH
Sbjct: 154 CPSTSLKDIDHLFRVDTGKGLDETFDEFDPIALGVASLAQVHKARLKDSDVWVAVKVQHP 213
Query: 189 HMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLENF 248
++ + D + + + FP F WL E+ SLP+ELDF EAKNS + E+F
Sbjct: 214 SVSLNSPLDLSMTRWVFKAIKTFFPDFKLMWLADEIERSLPQELDFTREAKNSIETKEHF 273
Query: 249 WKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAF 308
H++ +Y P+V W S ++L+ME+V GA+++++ + + I VS + F
Sbjct: 274 ----AHLSTSLYVPEVMW--SKPRILVMEYVAGARIDNLSFMDEHSISRDLVSVDICHIF 327
Query: 309 AEMMF-KHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYA 367
EM+F K G +HCDPH N+L+R P KS R +++L+DHGLY+++ + +YA
Sbjct: 328 NEMIFGKGGHLHCDPHGGNVLIRSKPKNSKS---PRNYEIVLLDHGLYRDIPHELQVDYA 384
Query: 368 ALW 370
+W
Sbjct: 385 NMW 387
>sp|Q80V03|ADCK5_MOUSE Uncharacterized aarF domain-containing protein kinase 5 OS=Mus
musculus GN=Adck5 PE=2 SV=2
Length = 582
Score = 208 bits (530), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 209/381 (54%), Gaps = 27/381 (7%)
Query: 3 ARSIWRYGGKLAVAATALG-----GGAALASSDDPATALKLCSAVPVRLVRDSVTAASIA 57
AR +WR A++AT +G G + L+L R R I+
Sbjct: 43 ARLLWRR----ALSATVVGTPFLLGAYYFMAEASERRKLRLAVDGIGRFGRSVKIGLFIS 98
Query: 58 FDYEYS----LWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYL 113
DY + L G+ E S + ++ H R+A L +NGG+Y+KLGQ + +L
Sbjct: 99 TDYWWCTNVVLRGVEENSPKYVEIMSACHQRAADALVAGAIRNGGLYVKLGQGLCSFNHL 158
Query: 114 VPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVA 173
+P EY+Q +R + +K + +V ++F ++ P+++F +FD P+A+ASLAQVH A
Sbjct: 159 LPTEYIQTLR-VLEDKALTRGFREVDELFLEDFQALPNELFQEFDYEPMAAASLAQVHRA 217
Query: 174 RNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELD 233
+ DG VAVKVQ+ + D D T+ELL+ + + PSF + W++ +++ +L +ELD
Sbjct: 218 KLHDGTDVAVKVQYIDLRDRFDGDVQTLELLLRLVELMHPSFGFSWVLQDLKGTLVQELD 277
Query: 234 FLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKL 293
F E +N+E+ + H +Y+ P+V+W+ S+ ++L +F +G +VND++ I+
Sbjct: 278 FENEGRNAERCAQEL----KHF-HYVVIPRVHWDRSSKRVLTADFCNGCKVNDMEGIKSQ 332
Query: 294 GIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHG 353
G+ +V++ + Q FAE +F GF+H DPH N+LVR P K +L+L+DHG
Sbjct: 333 GLAVQDVAKKLIQTFAEQIFHTGFIHSDPHPGNVLVRKGPDG--------KAELVLLDHG 384
Query: 354 LYKELDATTKFNYAALWKVLM 374
LY+ LD + + LW+ ++
Sbjct: 385 LYQFLDEKDRSSLCQLWRAII 405
>sp|Q3MIX3|ADCK5_HUMAN Uncharacterized aarF domain-containing protein kinase 5 OS=Homo
sapiens GN=ADCK5 PE=2 SV=2
Length = 580
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 185/334 (55%), Gaps = 18/334 (5%)
Query: 45 RLVRDSVTAASIAFDYEYS----LWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIY 100
R R I+ DY + L G+ E S +V H R+A L NGG+Y
Sbjct: 86 RFGRSLKVGLQISLDYWWCTNVVLRGVEENSPGYLEVMSACHQRAADALVAGAISNGGLY 145
Query: 101 IKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPV 160
+KLGQ + +L+P EY + +R + ++ + +V ++F ++ P ++F +FD
Sbjct: 146 VKLGQGLCSFNHLLPPEYTRTLR-VLEDRALKRGFQEVDELFLEDFQALPHELFQEFDYQ 204
Query: 161 PIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWL 220
PIA+ASLAQVH A+ DG VAVKVQ+ + D D T+ELL+ + + PSF + W+
Sbjct: 205 PIAAASLAQVHRAKLHDGTSVAVKVQYIDLRDRFDGDIHTLELLLRLVEVMHPSFGFSWV 264
Query: 221 VAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVD 280
+ +++ +L +ELDF E +N+E+ Y+ P+V+W+ S+ ++L +F
Sbjct: 265 LQDLKGTLAQELDFENEGRNAERCARELAHFP-----YVVVPRVHWDKSSKRVLTADFCA 319
Query: 281 GAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSIL 340
G +VNDV++IR G+ H+++ + +AFAE +F GF+H DPH N+LVR P K
Sbjct: 320 GCKVNDVEAIRSQGLAVHDIAEKLIKAFAEQIFYTGFIHSDPHPGNVLVRKGPDGKA--- 376
Query: 341 GKRKPQLILIDHGLYKELDATTKFNYAALWKVLM 374
+L+L+DHGLY+ L+ + LW+ ++
Sbjct: 377 -----ELVLLDHGLYQFLEEKDRAALCQLWRAII 405
>sp|Q06567|YL253_YEAST ABC1 family protein YLR253W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YLR253W PE=1 SV=1
Length = 569
Score = 188 bits (477), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 173/322 (53%), Gaps = 12/322 (3%)
Query: 58 FDYEYSLWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQE 117
+ Y+ +L E ER ++ H A NGGIYIKLGQHIG + YL+P+E
Sbjct: 81 YHYKRALNKSYENKKEREVALNKCHKMCALITLHALRSNGGIYIKLGQHIGAMTYLLPKE 140
Query: 118 YVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVA--RN 175
+ M + + CP S+Y+++ ++FK++LG + + +F +F+ PI ASLAQVHVA +N
Sbjct: 141 WTDTMI-PLQDHCPESTYEEIDELFKEDLGTSIEDMFLEFNKTPIGVASLAQVHVAKLKN 199
Query: 176 RDGQ--KVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELD 233
DG+ VAVK QH + + D + L FP + WL E++ S+ EL+
Sbjct: 200 SDGKGSSVAVKCQHPSLKEFIPLDVMLTRTVFELLDVFFPDYPLTWLGDELQSSIYVELN 259
Query: 234 FLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKL 293
F EA+N+EK F K A I PKV S ++LIME+V G +++D++ I
Sbjct: 260 FTKEAENAEKTRHYFSKFKKQTALKI--PKVI--ESHKRILIMEYVGGKRLDDLEYIDSH 315
Query: 294 GIDPHEVSRLVSQAFAEMMFKHGF-VHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDH 352
GI EVS +S F M+F +HCDPH NL +R V K + G +++L DH
Sbjct: 316 GISRSEVSSCLSHIFNNMIFTPNVGIHCDPHGGNLAIRSVKPAKDN--GYHNFEIVLFDH 373
Query: 353 GLYKELDATTKFNYAALWKVLM 374
GLY+ T+ YA W L+
Sbjct: 374 GLYRYPSTRTRRLYAKFWLSLL 395
>sp|O42653|YF9E_SCHPO ABC1 family protein C10F6.14c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC10F6.14c PE=3 SV=1
Length = 535
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 165/313 (52%), Gaps = 18/313 (5%)
Query: 44 VRLVRDSVTAASIAFDYEYSLWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKL 103
R +R TA+ IA DY+ + S ++A +H R A++L + +KNGG+YIK+
Sbjct: 74 TRSIRTVYTASIIAADYKLNF------SEKKADKIDALHQRVAQRLFKTIYKNGGLYIKM 127
Query: 104 GQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIA 163
GQ I +P+ Y + + M + P ++++ D+FK++ G+ ++VF + A
Sbjct: 128 GQIIAMQSNNLPEAYGKAF-QGMFDNAPQVEWEELQDIFKEQYGRPVEEVFASIEKRAAA 186
Query: 164 SASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTL-HWLFPSFDYRWLVA 222
SAS+AQVH A G+KVAVK+Q + + D + ++ W+F Y + V
Sbjct: 187 SASIAQVHRAVLPSGEKVAVKIQKPDVAKQMSWDLLVYKYMMYVYDKWIFHIPLY-FTVD 245
Query: 223 EMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGA 282
+ E L E+DF EA NSE E + + ++ + IY PKVY +S ++++ E+ DG
Sbjct: 246 YVSERLRSEVDFTTEANNSEHAREGV-EETDYLRDKIYIPKVYKEISGKRVMVTEWADGI 304
Query: 283 QVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGK 342
+ D ++ + G+ E+ + + A MF VHCDPH N+LVR K+ G
Sbjct: 305 PLYDQTALSEAGMSKKEILTNLFRFLAFQMFHSKQVHCDPHPGNILVR------KNQAG- 357
Query: 343 RKPQLILIDHGLY 355
Q +++DHGLY
Sbjct: 358 -LCQTVILDHGLY 369
>sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1770 PE=3 SV=1
Length = 585
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 145/284 (51%), Gaps = 22/284 (7%)
Query: 84 RSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFK 143
R A+ ++E G +IK+GQ L P EYV+ + + ++ P SY+Q + +
Sbjct: 83 RQAKWIRENLLSLGPTFIKVGQLFSTRSDLFPAEYVEEL-SKLQDEVPAFSYEQAAGIIE 141
Query: 144 KELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVEL 203
+ELGK +++ FDPVP+A+ASL QVH A+ G+ V VKVQ + D A ++
Sbjct: 142 EELGKPIAKLYRSFDPVPLAAASLGQVHKAQLHTGEDVVVKVQRPGLKKLFTIDLAILKK 201
Query: 204 LV----NTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYI 259
+ N W D+ + E + L +E D+L E ++++ NF +++
Sbjct: 202 IAQYFQNHPKW-GRGRDWNGIYEECCKILWQETDYLREGRSADTFRRNF-----RGEDWV 255
Query: 260 YAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVH 319
P+VYW +++++L +E++ G +++ ++ G++ E+++L ++A+ + HGF H
Sbjct: 256 KVPRVYWRYTSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNHGFFH 315
Query: 320 CDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTK 363
DPH NL V P E LI D G+ E+ TK
Sbjct: 316 ADPHPGNLAVSPEAGE-----------LIFYDFGMMGEITPDTK 348
>sp|P96936|Y647_MYCTU Uncharacterized protein Rv0647c/MT0675 OS=Mycobacterium
tuberculosis GN=Rv0647c PE=3 SV=1
Length = 488
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 137/270 (50%), Gaps = 17/270 (6%)
Query: 97 GGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDD 156
G Y+K GQ I + + R +L++ P + D+V +F +ELG P ++F
Sbjct: 104 GPTYVKFGQIIASSPGAFGESLSREFR-GLLDRVPPAKTDEVHKLFVEELGDEPARLFAS 162
Query: 157 FDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHW--LFPS 214
F+ P ASAS+AQVH A R G++V VK+Q + AAD ++ T+ L
Sbjct: 163 FEEEPFASASIAQVHYATLRSGEEVVVKIQRPGIRRRVAADLQILKRFAQTVELAKLGRR 222
Query: 215 FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLL 274
+ +VA+ ++L +ELDF LEA++ E + + SP + I P+V+W+ +T ++L
Sbjct: 223 LSAQDVVADFADNLAEELDFRLEAQSMEAWVSHL-HASP-LGKNIRVPQVHWDFTTERVL 280
Query: 275 IMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPS 334
ME V G ++++ +IRK G D E+ + + + E +HG H D HA NL V
Sbjct: 281 TMERVHGIRIDNAAAIRKAGFDGVELVKALLFSVFEGGLRHGLFHGDLHAGNLYV----- 335
Query: 335 EKKSILGKRKPQLILIDHGLYKELDATTKF 364
+++ D G+ +D T++
Sbjct: 336 -------DEAGRIVFFDFGIMGRIDPRTRW 358
>sp|P73121|Y1919_SYNY3 Uncharacterized protein slr1919 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1919 PE=3 SV=1
Length = 566
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 142/288 (49%), Gaps = 21/288 (7%)
Query: 84 RSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFK 143
+ A L+EL K G +IK+GQ + LV +++++ + + + ++ P D + +
Sbjct: 68 QRAEDLRELLTKLGPTFIKVGQALSTRPDLVRRDFLEELIK-LQDQLPPFDNDLAFQLME 126
Query: 144 KELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVEL 203
++LG D+ + + P+A+ASL QV+ A G++VAVKVQ ++ + D + L
Sbjct: 127 EQLGMKVDEAYREISAHPVAAASLGQVYRAMLFSGEEVAVKVQRPNLRPRLSLDLYLMRL 186
Query: 204 LVNTLHWLFP---SFDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIY 260
P D +V E L +E+D+L E +N+EK ENF H +
Sbjct: 187 GAQKFGRFLPLNLGHDLTLIVDEFGIKLFEEIDYLNEGRNAEKFAENF-----HGDAEVK 241
Query: 261 APKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHC 320
P +YW S K+L +E++ G ++ D IR G+DP ++ R+ + + +HGF H
Sbjct: 242 VPCIYWQYSNQKVLTLEWIQGFKLTDTDKIRAAGLDPSDIIRIGVTSGLRQLLEHGFFHA 301
Query: 321 DPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 368
DPH NL ++ G+ + ID G+ +L+ TK A+
Sbjct: 302 DPHPGNLFA--------TLDGR----MAYIDFGMMDQLEPGTKETIAS 337
>sp|Q46189|YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region (Fragment)
OS=Clostridium pasteurianum PE=3 SV=1
Length = 530
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 140/271 (51%), Gaps = 14/271 (5%)
Query: 62 YSLWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQI 121
Y +G S K +LR A +EL G +IK+GQ + L+P Y++
Sbjct: 15 YYGFGFIVDSKLNGNKKSPENLRKA--FEEL----GPTFIKIGQILSTRPDLLPLPYIKE 68
Query: 122 MRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKV 181
+ + + N P ++ + ++F +EL T D F FD PI SAS+AQVH A +DG+ V
Sbjct: 69 LSK-LQNNVPPENFIDIENLFFEELSSTIDNTFLYFDKTPIGSASIAQVHDAILKDGRFV 127
Query: 182 AVKVQHTHMTDTAAADHATVELLVNTLHWLFPS--FDYRWLVAEMRESLPKELDFLLEAK 239
VK+Q + + D + ++ L+N F D + + E+ S +ELDF+ E
Sbjct: 128 IVKIQRPGIAEMMKTDLSIIKKLLNITKTKFTDALIDPKEAIDELFISTTQELDFINEIN 187
Query: 240 NSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHE 299
N +K F KL+ + ++ P L T K+++ME + G +++++K + G D E
Sbjct: 188 NIKK----FKKLNEDVK-FVRTPYTIDKLCTEKIIVMEKIVGIKIDNLKKLLNEGYDLEE 242
Query: 300 VSRLVSQAFAEMMFKHGFVHCDPHAANLLVR 330
+ + ++ ++ + +F+ GF H DPH NLL+R
Sbjct: 243 LGKKLTLSYFKQVFQDGFFHGDPHPGNLLIR 273
>sp|Q9JVQ5|UBIB_NEIMA Probable ubiquinone biosynthesis protein UbiB OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=ubiB PE=3 SV=1
Length = 503
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 141/265 (53%), Gaps = 22/265 (8%)
Query: 73 ERAKVKHE---VHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNK 129
+ +K+K+E V LR A L+ L G I+IK GQ + L+P +Y + + +K
Sbjct: 41 QSSKLKNEPPAVRLRLA--LESL----GPIFIKFGQVLSTRPDLIPHDYA-VELAKLQDK 93
Query: 130 CPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTH 189
P + +K LG++ ++++ +F+ PIASAS+AQVH AR G++VAVKV +
Sbjct: 94 VPPFDARLSREQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGERVAVKVLRPN 153
Query: 190 MTDTAAADHATVELLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLLEAKNSEKV 244
+ D + + + LF D R L VAE + L ELD + EA N+ ++
Sbjct: 154 LLPLIEQDLSLMRFGAAWVERLFS--DGRRLKPLEVVAEFDKYLHDELDLMREAANAGQL 211
Query: 245 LENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLV 304
NF H +N + PKV+++ TS +L +E++DG V D+ ++ GID H+++
Sbjct: 212 GRNF-----HNSNMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYG 266
Query: 305 SQAFAEMMFKHGFVHCDPHAANLLV 329
+ F +F+ GF H D H N+LV
Sbjct: 267 VEIFFTQVFRDGFFHADMHPGNILV 291
>sp|Q9K0N0|UBIB_NEIMB Probable ubiquinone biosynthesis protein UbiB OS=Neisseria
meningitidis serogroup B (strain MC58) GN=ubiB PE=3 SV=1
Length = 503
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 140/263 (53%), Gaps = 18/263 (6%)
Query: 73 ERAKVKHE---VHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNK 129
+ +K+K+E V LR A L+ L G I+IK GQ + L+P +Y + + +K
Sbjct: 41 QSSKLKNEPPAVRLRLA--LESL----GPIFIKFGQVLSTRPDLIPHDYA-VELAKLQDK 93
Query: 130 CPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTH 189
P + +K LG++ ++++ +F+ PIASAS+AQVH AR G++VAVKV +
Sbjct: 94 VPPFDARLSREQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGEQVAVKVLRPN 153
Query: 190 MTDTAAADHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLE 246
+ D + + + LF R +VAE + L ELD + EA N+ ++
Sbjct: 154 LLPVIEQDLSLMRFGAGWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGR 213
Query: 247 NFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQ 306
NF ++ + PKV+++ TS +L +E++DG V+D+ ++ GID H+++ +
Sbjct: 214 NF-----QNSDMLIVPKVFYDYCTSDVLTIEWMDGTPVSDIAKLKADGIDLHKLADYGVE 268
Query: 307 AFAEMMFKHGFVHCDPHAANLLV 329
F +F+ GF H D H N+LV
Sbjct: 269 IFFTQVFRDGFFHADMHPGNILV 291
>sp|B1XWR5|UBIB_LEPCP Probable ubiquinone biosynthesis protein UbiB OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB
PE=3 SV=1
Length = 522
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 135/270 (50%), Gaps = 17/270 (6%)
Query: 97 GGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDD 156
G I++K GQ + L+P + + + ++ P D + LG+ ++VF
Sbjct: 61 GPIFVKFGQVLSTRRDLIPHDIANEL-AKLQDRVPPFPSDVSRAAVVQSLGRPIEEVFAS 119
Query: 157 FDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPS-- 214
FD P+ASAS+AQVH DG++VAVKV ++ + AD A + + L L P
Sbjct: 120 FDADPVASASIAQVHFGVLHDGREVAVKVLRPNVLNIIEADLALLRVAAAWLERLSPDGR 179
Query: 215 -FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKL 273
R +VAE L ELD EA N+ ++ N L + I P++ W+LS++++
Sbjct: 180 RLRPREVVAEFDNYLHDELDLGREAANAAQLRRNMGGL-----DLIMLPEMIWDLSSAEV 234
Query: 274 LIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVP 333
L+ME + G ++ ++++R GID +++R F +F+ GF H D H N++V P
Sbjct: 235 LVMERMHGVPISQIETLRAAGIDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIMVSTAP 294
Query: 334 SEKKSILGKRKPQLILIDHGLYKELDATTK 363
+ G+ I +D G+ LD+ K
Sbjct: 295 ----ATFGR----YIALDFGIVGTLDSRDK 316
>sp|Q9ASX5|Y5520_ARATH Uncharacterized aarF domain-containing protein kinase At5g05200,
chloroplastic OS=Arabidopsis thaliana GN=At5g05200 PE=1
SV=1
Length = 540
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 136/255 (53%), Gaps = 13/255 (5%)
Query: 80 EVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVC 139
++ L S L++L + G YIKLGQ I L P EYV+ ++ +K P ++++
Sbjct: 120 QLGLLSPLYLRKLFERMGATYIKLGQFIASAPTLFPPEYVKEF-QNCFDKAPPVPFEEIR 178
Query: 140 DVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQK-VAVKVQHTHMTDTAAADH 198
+ ++ELG+ + V++ DP PIASAS+AQVH AR R Q+ V +KV + D AD
Sbjct: 179 KILQEELGRPIESVYEYVDPTPIASASIAQVHGARLRGSQEDVVIKVLKPGIEDFLVADL 238
Query: 199 ATVELLVNTLHWLFPSFDYRWLVA---EMRESLPKELDFLLEAKNSEKVLENFWKL--SP 253
+ ++ +L P F LV ++RES+ +E+DF EA+N +E+F + +
Sbjct: 239 NFIYVVSRIFEFLSPEFSRTSLVGIVKDIRESMLEEVDFNKEAQN----IESFKRYLETM 294
Query: 254 HIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDP-HEVSRLVSQAFAEMM 312
+ AP+VY S+ ++L ME + G + D+ SIR L P + + ++ F ++
Sbjct: 295 GLTGQATAPRVYKYCSSRRVLTMERLYGVPLTDLDSIRSLVSSPENSLITALNVWFGSLL 354
Query: 313 FKHGFVHCDPHAANL 327
F H D HA NL
Sbjct: 355 ACESF-HADVHAGNL 368
>sp|Q87CN1|UBIB_XYLFT Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=ubiB PE=3 SV=1
Length = 552
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 149/306 (48%), Gaps = 25/306 (8%)
Query: 67 LPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESM 126
+P S+E + LR A LQEL G I++K GQ + LVPQ+ I E +
Sbjct: 39 VPRISAEIVEQSRGRRLRLA--LQEL----GPIFVKFGQILSTRRDLVPQD---IGDELV 89
Query: 127 LNKCPVSSYD--QVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVK 184
+ + V ++ + + LGK+ + F FD VP+ASAS++QVH A D + V VK
Sbjct: 90 MLQDRVEPFEGQTARSIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRRAVVVK 149
Query: 185 VQHTHMTDTAAADHATVELLVNTLHWLFPSFDY---RWLVAEMRESLPKELDFLLEAKNS 241
V + + D A ++ L + P+ D R +VAE+ +L ELD E N+
Sbjct: 150 VLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPREIVAEIETTLAAELDLQREGANA 209
Query: 242 EKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVS 301
VL FW+ S + IY P+V W+ + ++L +E + G +D+ + GID +S
Sbjct: 210 -SVLRRFWEAS----DDIYVPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALS 264
Query: 302 RLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDAT 361
+ F +F+ F H D H+ N+ V P+ K + P+ I++D G+ +L
Sbjct: 265 SKGIRVFYTQVFRDNFFHADAHSGNIWVDSDPARKSN------PRFIVLDFGIMGQLSQK 318
Query: 362 TKFNYA 367
++ A
Sbjct: 319 DQYYLA 324
>sp|B2I583|UBIB_XYLF2 Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M23) GN=ubiB PE=3 SV=1
Length = 552
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 149/306 (48%), Gaps = 25/306 (8%)
Query: 67 LPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESM 126
+P S+E + LR A LQEL G I++K GQ + LVPQ+ I E +
Sbjct: 39 VPRISAEIVEQSRGRRLRLA--LQEL----GPIFVKFGQILSTRRDLVPQD---IGDELV 89
Query: 127 LNKCPVSSYD--QVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVK 184
+ + V ++ + + LGK+ + F FD VP+ASAS++QVH A D + V VK
Sbjct: 90 MLQDRVEPFEGQTARSIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRRAVVVK 149
Query: 185 VQHTHMTDTAAADHATVELLVNTLHWLFPSFDY---RWLVAEMRESLPKELDFLLEAKNS 241
V + + D A ++ L + P+ D R +VAE+ +L ELD E N+
Sbjct: 150 VLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPREIVAEIETTLAAELDLQREGANA 209
Query: 242 EKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVS 301
VL FW+ S + IY P+V W+ + ++L +E + G +D+ + GID +S
Sbjct: 210 -SVLRRFWEAS----DDIYVPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALS 264
Query: 302 RLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDAT 361
+ F +F+ F H D H+ N+ V P+ K + P+ I++D G+ +L
Sbjct: 265 SKGIRVFYTQVFRDNFFHADAHSGNIWVDSDPARKSN------PRFIVLDFGIMGQLSQK 318
Query: 362 TKFNYA 367
++ A
Sbjct: 319 DQYYLA 324
>sp|B1J2S6|UBIB_PSEPW Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain W619) GN=ubiB PE=3 SV=1
Length = 539
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 142/309 (45%), Gaps = 50/309 (16%)
Query: 67 LPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESM 126
LP SE + LR A LQ+L G I+IK GQ + L+P + I E M
Sbjct: 46 LPRTPSE---LSRGARLRLA--LQDL----GPIFIKFGQLLSTRRDLLPTD---IADELM 93
Query: 127 LNKCPVSSYD--QVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVK 184
L + V +D Q + + +LG +VF FD P+ASAS+AQVH AR + G++V VK
Sbjct: 94 LLQDRVPPFDPKQAVALIESQLGAKVGEVFSRFDVEPLASASVAQVHAARLKTGEEVVVK 153
Query: 185 VQHTHMTDTAAADHATVELLVNTLHWLF--------PSFDYRWL-----VAEMRESLPKE 231
V + A D L WLF S D R L V + +++ E
Sbjct: 154 VVRPGLKPVIAQD----------LAWLFLIAKGAERASADARRLHPVEIVGDYEKTIYDE 203
Query: 232 LDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIR 291
LD L EA N+ ++ NF + +Y P+VYW+L K+L+ME + G V D+ ++
Sbjct: 204 LDLLREAANASQLRRNF-----EGSELMYVPQVYWDLCRPKVLVMERIYGVPVTDMATLA 258
Query: 292 KLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILID 351
D ++ + F +F+H F H D H N+ V S + PQ I ID
Sbjct: 259 DQRTDMKLLAERGVEVFFTQVFRHSFFHADMHPGNIFV--------STVKPWSPQYIAID 310
Query: 352 HGLYKELDA 360
G+ L A
Sbjct: 311 CGIVGSLTA 319
>sp|Q8Y275|UBIB_RALSO Probable ubiquinone biosynthesis protein UbiB OS=Ralstonia
solanacearum (strain GMI1000) GN=ubiB PE=3 SV=1
Length = 525
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 136/279 (48%), Gaps = 22/279 (7%)
Query: 97 GGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDD 156
G I++K GQ + L+P + + + ++ P + ++ LGK +F
Sbjct: 61 GPIFVKFGQVLSTRRDLLPPDVADEL-AKLQDRVPPFDPKIAAAIVERSLGKPLSALFHR 119
Query: 157 FDPVPIASASLAQVHVARNR----DGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLF 212
FD P+ASAS+AQVH A R DG++VAVKV M +D A + + + L+
Sbjct: 120 FDHHPVASASIAQVHFATLRGGPDDGREVAVKVLRPGMLPVIDSDLALMRDVATWMEKLW 179
Query: 213 PS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLS 269
R +VAE + L ELD + EA N+ ++ NF K + + P+V+W+
Sbjct: 180 ADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFAK-----SELLLVPEVFWDWC 234
Query: 270 TSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLV 329
TS++ +ME + G +V+ +R G+D H+++R + F +F+ GF H D H N+LV
Sbjct: 235 TSEVFVMERMHGVRVSHADELRAAGVDTHKLARDGVEIFFTQVFRDGFFHADMHPGNILV 294
Query: 330 RPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 368
P LG+ I +D G+ L K NY A
Sbjct: 295 SVAPES----LGR----YIALDFGIVGALSEFDK-NYLA 324
>sp|B0U2R2|UBIB_XYLFM Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M12) GN=ubiB PE=3 SV=1
Length = 552
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 149/306 (48%), Gaps = 25/306 (8%)
Query: 67 LPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESM 126
+P S+E + LR A LQEL G I++K GQ + LVPQ+ I E +
Sbjct: 39 VPRISAEIVEQSRGRRLRLA--LQEL----GPIFVKFGQILSTRRDLVPQD---IGDELV 89
Query: 127 LNKCPVSSYDQVCD--VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVK 184
+ + V ++ + + LGK+ + F FD VP+ASAS++QVH A D ++V VK
Sbjct: 90 MLQDRVEPFEGQTARIIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRREVVVK 149
Query: 185 VQHTHMTDTAAADHATVELLVNTLHWLFPSFDY---RWLVAEMRESLPKELDFLLEAKNS 241
V + + D A ++ L + P+ D R +VAE+ +L ELD E N+
Sbjct: 150 VLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPREIVAEIETTLAAELDLQREGANA 209
Query: 242 EKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVS 301
VL FW+ S + IY P+V W+ + ++L +E + G +D+ + GID +S
Sbjct: 210 -SVLRRFWEAS----DDIYVPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALS 264
Query: 302 RLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDAT 361
+ F +F+ F H D H+ N+ V P+ K + P+ I +D G+ +L
Sbjct: 265 SKGIRVFYTQVFRDNFFHADAHSGNIWVDSDPARKSN------PRFIALDFGIMGQLSQK 318
Query: 362 TKFNYA 367
++ A
Sbjct: 319 DQYYLA 324
>sp|Q9PCE8|UBIB_XYLFA Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain 9a5c) GN=ubiB PE=3 SV=1
Length = 552
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 149/306 (48%), Gaps = 25/306 (8%)
Query: 67 LPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESM 126
+P S+E + LR A LQEL G I++K GQ + LVPQ+ I E +
Sbjct: 39 VPRISAEIVEQSRGRRLRLA--LQEL----GPIFVKFGQILSTRRDLVPQD---IGDELV 89
Query: 127 LNKCPVSSYDQVCD--VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVK 184
+ + V ++ + + LGK+ + F FD VP+ASAS++QVH A DG++V VK
Sbjct: 90 MLQDRVEPFEGQTARIIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDGREVVVK 149
Query: 185 VQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRW---LVAEMRESLPKELDFLLEAKNS 241
V + + D A ++ L + P+ D +VAE+ +L ELD E N+
Sbjct: 150 VLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPCEIVAEIETTLAAELDLQREGANA 209
Query: 242 EKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVS 301
VL FW+ S + IY P+V W+ + ++L +E + G +D+ + GID +S
Sbjct: 210 -SVLRRFWEAS----DDIYVPEVIWSHTAEQVLTLERMYGIPSDDIALLDASGIDRKALS 264
Query: 302 RLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDAT 361
+ F +F+ F H D H+ N+ V P+ K + P+ I +D G+ +L
Sbjct: 265 SKGIRVFYTQVFRDNFFHADAHSGNIWVDSDPARKSN------PRFIALDFGIMGQLSQK 318
Query: 362 TKFNYA 367
++ A
Sbjct: 319 DQYYLA 324
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1
Length = 508
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 14/241 (5%)
Query: 97 GGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDD 156
G I++K GQ + L+P EY + + ++ P D V ++ LG+ +++F D
Sbjct: 60 GPIFVKFGQVLSTRRDLLPPEYADEL-ALLQDRVPPFDGDIARQVVERSLGRKVEELFVD 118
Query: 157 FDPVPIASASLAQVHVA--RNRDG---QKVAVKVQHTHMTDTAAADHATVELLVNTLHWL 211
FD P+ASAS+AQVH A R DG ++VAVKV + D + + L + L
Sbjct: 119 FDLKPVASASVAQVHKAWLRQPDGGRGREVAVKVLRPGILPVIEQDLSLMRTLAGWVEKL 178
Query: 212 FPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNL 268
F R +VAE + L ELD + EA N+ ++ NF ++ + P+V+++
Sbjct: 179 FADGKRLKPREVVAEFDKYLHDELDMMHEAANASQLRRNF-----KGSDMLIVPEVFYDY 233
Query: 269 STSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLL 328
S+ ++L +E++ G V ++ +R+ G+D ++SR + F +F+HGF H D H N+
Sbjct: 234 SSREVLTLEWMHGIPVGQIERLREAGVDLQKLSRFGVEIFFTQVFRHGFFHADMHPGNIF 293
Query: 329 V 329
V
Sbjct: 294 V 294
>sp|C3K8U2|UBIB_PSEFS Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain SBW25) GN=ubiB PE=3 SV=1
Length = 534
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 140/288 (48%), Gaps = 25/288 (8%)
Query: 78 KHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYD- 136
+ ++ L +L+ G I+IK GQ + L+P++ I E ML + V +D
Sbjct: 48 RKQLELSRGARLRLALQDLGPIFIKFGQILSTRRDLLPED---IADELMLLQDRVPPFDS 104
Query: 137 -QVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAA 195
Q + +++LGK +VF FD P+ASAS+AQVH A+ + G++V VKV +
Sbjct: 105 QQSMKLIEEQLGKKISEVFSRFDVDPLASASVAQVHAAQLKTGEEVVVKVIRPGLKPIIG 164
Query: 196 ADHATVELLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLLEAKNSEKVLENFWK 250
D A + +L S D R L VA+ +++ ELD L EA N+ ++ NF +
Sbjct: 165 QDLAWLFILARAAERF--SADARLLHPVDVVADYEKTIYDELDLLREAANASQLKRNF-E 221
Query: 251 LSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAE 310
SP +Y P+VYW+ K+L+ME + G QV D+ ++ D ++ + F
Sbjct: 222 GSP----LLYVPQVYWDWCRPKVLVMERIYGVQVTDLATLADQRTDMKMLAERGVEIFFT 277
Query: 311 MMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKEL 358
+F+ F H D H N+ V S + PQ I ID G+ L
Sbjct: 278 QVFRDSFFHADMHPGNIFV--------STVNPWSPQYIAIDCGIVGSL 317
>sp|Q63X97|UBIB_BURPS Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain K96243) GN=ubiB PE=3 SV=1
Length = 525
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 83 LRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVF 142
+R R L+ L G I++K GQ + L+P ++ + + ++ P +
Sbjct: 50 VRLRRALESL----GPIFVKFGQVLSTRRDLLPVDFANEL-AKLQDQVPPFDSAVAIAIV 104
Query: 143 KKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAADH 198
+K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +D
Sbjct: 105 EKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDL 164
Query: 199 ATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHI 255
A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 165 ALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL---- 220
Query: 256 ANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKH 315
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F+
Sbjct: 221 -DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRD 279
Query: 316 GFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 368
GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 280 GFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|A3N5V1|UBIB_BURP6 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 668) GN=ubiB PE=3 SV=1
Length = 525
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 83 LRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVF 142
+R R L+ L G I++K GQ + L+P ++ + + ++ P +
Sbjct: 50 VRLRRALESL----GPIFVKFGQVLSTRRDLLPVDFANEL-AKLQDQVPPFDSAVAIAIV 104
Query: 143 KKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAADH 198
+K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +D
Sbjct: 105 EKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDL 164
Query: 199 ATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHI 255
A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 165 ALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL---- 220
Query: 256 ANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKH 315
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F+
Sbjct: 221 -DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRD 279
Query: 316 GFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 368
GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 280 GFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|Q3JVZ2|UBIB_BURP1 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 1710b) GN=ubiB PE=3 SV=1
Length = 525
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 83 LRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVF 142
+R R L+ L G I++K GQ + L+P ++ + + ++ P +
Sbjct: 50 VRLRRALESL----GPIFVKFGQVLSTRRDLLPVDFANEL-AKLQDQVPPFDSAVAIAIV 104
Query: 143 KKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAADH 198
+K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +D
Sbjct: 105 EKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDL 164
Query: 199 ATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHI 255
A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 165 ALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL---- 220
Query: 256 ANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKH 315
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F+
Sbjct: 221 -DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRD 279
Query: 316 GFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 368
GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 280 GFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|A3NRJ7|UBIB_BURP0 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 1106a) GN=ubiB PE=3 SV=1
Length = 525
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 83 LRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVF 142
+R R L+ L G I++K GQ + L+P ++ + + ++ P +
Sbjct: 50 VRLRRALESL----GPIFVKFGQVLSTRRDLLPVDFANEL-AKLQDQVPPFDSAVAIAIV 104
Query: 143 KKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAADH 198
+K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +D
Sbjct: 105 EKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDL 164
Query: 199 ATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHI 255
A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 165 ALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL---- 220
Query: 256 ANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKH 315
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F+
Sbjct: 221 -DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRD 279
Query: 316 GFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 368
GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 280 GFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|A1V750|UBIB_BURMS Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain SAVP1) GN=ubiB PE=3 SV=1
Length = 525
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 83 LRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVF 142
+R R L+ L G I++K GQ + L+P ++ + + ++ P +
Sbjct: 50 VRLRRALESL----GPIFVKFGQVLSTRRDLLPVDFANEL-AKLQDQVPPFDSAVAIAIV 104
Query: 143 KKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAADH 198
+K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +D
Sbjct: 105 EKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDL 164
Query: 199 ATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHI 255
A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 165 ALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL---- 220
Query: 256 ANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKH 315
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F+
Sbjct: 221 -DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRD 279
Query: 316 GFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 368
GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 280 GFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|Q62MP2|UBIB_BURMA Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain ATCC 23344) GN=ubiB PE=3 SV=1
Length = 525
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 83 LRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVF 142
+R R L+ L G I++K GQ + L+P ++ + + ++ P +
Sbjct: 50 VRLRRALESL----GPIFVKFGQVLSTRRDLLPVDFANEL-AKLQDQVPPFDSAVAIAIV 104
Query: 143 KKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAADH 198
+K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +D
Sbjct: 105 EKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDL 164
Query: 199 ATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHI 255
A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 165 ALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL---- 220
Query: 256 ANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKH 315
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F+
Sbjct: 221 -DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRD 279
Query: 316 GFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 368
GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 280 GFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|A2S8L4|UBIB_BURM9 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain NCTC 10229) GN=ubiB PE=3 SV=1
Length = 525
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 83 LRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVF 142
+R R L+ L G I++K GQ + L+P ++ + + ++ P +
Sbjct: 50 VRLRRALESL----GPIFVKFGQVLSTRRDLLPVDFANEL-AKLQDQVPPFDSAVAIAIV 104
Query: 143 KKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAADH 198
+K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +D
Sbjct: 105 EKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDL 164
Query: 199 ATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHI 255
A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 165 ALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL---- 220
Query: 256 ANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKH 315
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F+
Sbjct: 221 -DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRD 279
Query: 316 GFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 368
GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 280 GFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|A3MNU1|UBIB_BURM7 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain NCTC 10247) GN=ubiB PE=3 SV=1
Length = 525
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 83 LRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVF 142
+R R L+ L G I++K GQ + L+P ++ + + ++ P +
Sbjct: 50 VRLRRALESL----GPIFVKFGQVLSTRRDLLPVDFANEL-AKLQDQVPPFDSAVAIAIV 104
Query: 143 KKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAADH 198
+K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +D
Sbjct: 105 EKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDL 164
Query: 199 ATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHI 255
A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 165 ALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL---- 220
Query: 256 ANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKH 315
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F+
Sbjct: 221 -DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRD 279
Query: 316 GFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 368
GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 280 GFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|Q1I3S8|UBIB_PSEE4 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
entomophila (strain L48) GN=ubiB PE=3 SV=1
Length = 537
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 129/271 (47%), Gaps = 25/271 (9%)
Query: 97 GGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYD--QVCDVFKKELGKTPDQVF 154
G I+IK GQ + L+P + I E ML + V +D + +++LG +VF
Sbjct: 68 GPIFIKFGQLLSTRRDLLPTD---IADELMLLQDRVPPFDPQHAVALIEEQLGAKVGEVF 124
Query: 155 DDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPS 214
FD P+ASAS+AQVH AR + G++V VKV + A D A + L+ S
Sbjct: 125 SRFDVEPLASASVAQVHAARLKSGEEVVVKVVRPGLKPVIAQDLAWLFLIAKAAE--RAS 182
Query: 215 FDYRWL-----VAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLS 269
D R L V + +++ ELD L EA N+ ++ NF + +Y P+VYW+L
Sbjct: 183 ADARRLHPVEIVGDYEKTIYDELDLLREAANASQLRRNF-----EGSELMYVPQVYWDLC 237
Query: 270 TSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLV 329
K+L+ME + G V D+ ++ D ++ + F +F+ F H D H N+ V
Sbjct: 238 RPKVLVMERIYGVPVTDMATLADQRTDMKMLAERGVEVFFTQVFRDSFFHADMHPGNIFV 297
Query: 330 RPVPSEKKSILGKRKPQLILIDHGLYKELDA 360
S + PQ I ID G+ L A
Sbjct: 298 --------STVKPWSPQYIAIDCGIVGSLTA 320
>sp|Q55680|Y005_SYNY3 Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0005 PE=3 SV=1
Length = 681
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 125/248 (50%), Gaps = 14/248 (5%)
Query: 86 ARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKE 145
A +L+EL G YIK+GQ + LVP ++ + ++ ++ P + ++E
Sbjct: 104 AIQLRELLTNLGPTYIKVGQALSTRPDLVPPVFLDEL-TTLQDQLPSFPNEVAYRFIEEE 162
Query: 146 LGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLV 205
LG ++++ + P PIA+ASL QV+ + + G+ VAVKVQ + D + ++
Sbjct: 163 LGAPAEEIYAELSPEPIAAASLGQVYKGKLKTGEAVAVKVQRPDLVRRITLD---IYIMR 219
Query: 206 NTLHWLFPSF-----DYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIY 260
+ W S D + E+ + +E+++ EA N EK + + L IY
Sbjct: 220 SLSLWARRSVKRLRSDLVAITDELASRVFEEMNYYQEAINGEKFAQLYGSLP-----EIY 274
Query: 261 APKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHC 320
P +YW + ++L ME+V+G ++ ++K+I+ GID + + Q + +HGF H
Sbjct: 275 VPSIYWQYTGRRVLTMEWVEGIKLTNIKAIQAQGIDATHLVEVGVQCSLRQLLEHGFFHA 334
Query: 321 DPHAANLL 328
DPH NLL
Sbjct: 335 DPHPGNLL 342
>sp|Q3KJC7|UBIB_PSEPF Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf0-1) GN=ubiB PE=3 SV=1
Length = 534
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 134/268 (50%), Gaps = 23/268 (8%)
Query: 97 GGIYIKLGQHIGQLEYLVPQEYV-QIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFD 155
G I+IK GQ + L+P++ ++MR + ++ P + +++LGK +VF
Sbjct: 67 GPIFIKFGQILSTRRDLLPEDIADELMR--LQDRVPPFDSQLSVKLIEEQLGKKISEVFS 124
Query: 156 DFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSF 215
FD P+ASAS+AQVH A+ + G++V VKV + A D A + +L + S
Sbjct: 125 RFDVEPLASASVAQVHAAQLKTGEEVVVKVIRPGLKPIIAQDLAWLFILARAAEKV--SA 182
Query: 216 DYRWL-----VAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLST 270
D R L V++ +++ ELD L EA N+ ++ NF + SP +Y P+VYW+
Sbjct: 183 DARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNF-EGSP----LLYVPQVYWDWCR 237
Query: 271 SKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVR 330
K+L+ME + G QV D+ ++ D ++ + F +F+ F H D H N+ V
Sbjct: 238 PKVLVMERIYGIQVTDLATLADQRTDMKMLAERGVEIFFTQVFRDSFFHADMHPGNIFV- 296
Query: 331 PVPSEKKSILGKRKPQLILIDHGLYKEL 358
S + PQ I ID G+ L
Sbjct: 297 -------STVNPWSPQYIAIDCGIVGSL 317
>sp|A5WA47|UBIB_PSEP1 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=ubiB PE=3 SV=1
Length = 540
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 130/271 (47%), Gaps = 25/271 (9%)
Query: 97 GGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYD--QVCDVFKKELGKTPDQVF 154
G I+IK GQ + L+P + I E ML + V +D + + +++LG +VF
Sbjct: 68 GPIFIKFGQLLSTRRDLLPPD---IADELMLLQDRVPPFDPKKAVALIEEQLGAKVGEVF 124
Query: 155 DDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPS 214
FD P+ASAS+AQVH AR + G++V VKV + A D A + L+ S
Sbjct: 125 SRFDVEPLASASVAQVHAARLKTGEEVVVKVVRPGLKPVIAQDLAWLFLIAKAAE--RAS 182
Query: 215 FDYRWL-----VAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLS 269
D R L V + +++ ELD L EA N+ ++ NF + +Y P+VYW+L
Sbjct: 183 ADARRLHPVEIVGDYEKTIYDELDLLREAANASQLRRNF-----EDSELMYVPQVYWDLC 237
Query: 270 TSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLV 329
K+L+ME + G V D+ ++ D ++ + F +F+ F H D H N+ V
Sbjct: 238 RPKVLVMERIYGVPVTDMATLADQRTDMKLLAERGVEVFFTQVFRDSFFHADMHPGNIFV 297
Query: 330 RPVPSEKKSILGKRKPQLILIDHGLYKELDA 360
S + PQ I ID G+ L A
Sbjct: 298 --------STVKPWSPQYIAIDCGIVGSLTA 320
>sp|Q4KJL4|UBIB_PSEF5 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=ubiB PE=3
SV=1
Length = 534
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 97 GGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDV--FKKELGKTPDQVF 154
G I+IK GQ + L+P++ I E ML + V +D V + +LGK VF
Sbjct: 67 GPIFIKFGQILSTRRDLLPED---IADELMLLQDRVPPFDSQKSVALIEAQLGKKISDVF 123
Query: 155 DDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPS 214
FD P+ASAS+AQVH A+ + G++V VKV + A D A + +L L S
Sbjct: 124 SRFDIEPLASASVAQVHAAKLKTGEEVVVKVIRPGLKPIIAQDLAWLFILARAAEKL--S 181
Query: 215 FDYRWL-----VAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLS 269
D R L V++ +++ ELD L EA N+ ++ NF + SP +Y P+VYW+
Sbjct: 182 ADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNF-EGSP----LLYVPQVYWDWC 236
Query: 270 TSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLV 329
K+L+ME + G QV D+ ++ D ++ + F +F+ F H D H N+ V
Sbjct: 237 RPKVLVMERIYGIQVTDLATLADQRTDMKMLAERGVEIFFTQVFRDSFFHADMHPGNIFV 296
Query: 330 RPVPSEKKSILGKRKPQLILIDHGLYKEL 358
S + PQ I ID G+ L
Sbjct: 297 --------STVQPWSPQYIAIDCGIVGSL 317
>sp|B0KM38|UBIB_PSEPG Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain GB-1) GN=ubiB PE=3 SV=1
Length = 540
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 130/271 (47%), Gaps = 25/271 (9%)
Query: 97 GGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYD--QVCDVFKKELGKTPDQVF 154
G I+IK GQ + L+P + I E ML + V +D + + +++LG +VF
Sbjct: 68 GPIFIKFGQLLSTRRDLLPTD---IADELMLLQDRVPPFDPQKAVALIEEQLGAKVGEVF 124
Query: 155 DDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPS 214
FD P+ASAS+AQVH AR + G++V VKV + A D A + L+ S
Sbjct: 125 SRFDVEPLASASVAQVHAARLKTGEEVVVKVVRPGLKPVIAQDLAWLFLIAKAAE--RAS 182
Query: 215 FDYRWL-----VAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLS 269
D R L V + +++ ELD L EA N+ ++ NF + +Y P+VYW+L
Sbjct: 183 ADARRLHPVEIVGDYEKTIYDELDLLREAANASQLRRNF-----EGSELMYVPQVYWDLC 237
Query: 270 TSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLV 329
K+L+ME + G V D+ ++ D ++ + F +F+ F H D H N+ V
Sbjct: 238 RPKVLVMERIYGVPVTDMVTLADQRTDMKLLAERGVEVFFTQVFRDSFFHADMHPGNIFV 297
Query: 330 RPVPSEKKSILGKRKPQLILIDHGLYKELDA 360
S + PQ I ID G+ L A
Sbjct: 298 --------STVKPWSPQYIAIDCGIVGSLTA 320
>sp|Q48PJ6|UBIB_PSE14 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=ubiB PE=3 SV=1
Length = 539
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 141/299 (47%), Gaps = 34/299 (11%)
Query: 67 LPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESM 126
LP SE + V R A LQ+L G I+IK GQ + L+P++ I E M
Sbjct: 46 LPRRKSE---LSRGVRFRLA--LQDL----GPIFIKFGQLLSTRRDLLPED---IADELM 93
Query: 127 LNKCPVSSYDQ--VCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVK 184
L + V +DQ ++ +++LG VF FD P+ASAS+AQVH A + G++V VK
Sbjct: 94 LLQDRVPPFDQQVAINLIEEQLGARICDVFSRFDETPLASASVAQVHAACLKTGEEVVVK 153
Query: 185 VQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLLEAK 239
V + D A + +L + S D R L V + +++ ELD L EA
Sbjct: 154 VVRPGLKPVIGQDLAWLFILARMAERV--SADARLLHPVQVVMDYEKTIYDELDLLREAA 211
Query: 240 NSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHE 299
NS ++ NF ++ +Y P+VYW+ K+L+ME + G QV D+ + D
Sbjct: 212 NSSQLRRNF-----EGSDLLYVPQVYWDWCRPKVLVMERIYGLQVTDMAGLADQRTDMKL 266
Query: 300 VSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKEL 358
++ + F +F+ F H D H N+ V S + P+ I ID G+ L
Sbjct: 267 LAERGVEIFFTQIFRDSFFHADMHPGNIFV--------STVNPWSPKYIAIDCGIVGSL 317
>sp|Q145N7|UBIB_BURXL Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
xenovorans (strain LB400) GN=ubiB PE=3 SV=1
Length = 525
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 97 GGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDV--FKKELGKTPDQVF 154
G I++K GQ + L+P V I E + V +D + +K LG D +F
Sbjct: 60 GPIFVKFGQVLSTRRDLLP---VDIANELAKLQDQVPPFDSAVAIGLVEKSLGAPVDVLF 116
Query: 155 DDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAADHATVELLVNTLHW 210
DDF+ VP+ASAS+AQVH A + GQ VAVKV +M +D A + +
Sbjct: 117 DDFERVPVASASIAQVHFATVKAGQHAGKAVAVKVLRPNMLPVIDSDLALLRDIAVWAER 176
Query: 211 LFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWN 267
L+ R +VAE + L ELD + EA N ++ NF L + + P++YW
Sbjct: 177 LWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL-----DLLLVPEMYWE 231
Query: 268 LSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANL 327
T +L+ME + G ++ V+++R G+D +++R + F +F+ GF H D H N+
Sbjct: 232 FCTPTVLVMERMVGVPISQVETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNI 291
Query: 328 LVRPVPS 334
V P+
Sbjct: 292 QVSLDPA 298
>sp|Q87UZ0|UBIB_PSESM Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
syringae pv. tomato (strain DC3000) GN=ubiB PE=3 SV=1
Length = 539
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 140/299 (46%), Gaps = 34/299 (11%)
Query: 67 LPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESM 126
LP SE + V R A LQ+L G I+IK GQ + L+P++ I E M
Sbjct: 46 LPRRKSE---LSRGVRFRLA--LQDL----GPIFIKFGQLLSTRRDLLPED---IADELM 93
Query: 127 LNKCPVSSYDQ--VCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVK 184
L + V +DQ + +++LG VF FD P+ASAS+AQVH A + G++V VK
Sbjct: 94 LLQDRVPPFDQQVAIKLIEEQLGARICDVFSRFDETPLASASVAQVHAACLKTGEEVVVK 153
Query: 185 VQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLLEAK 239
V + D A + +L + S D R L V + +++ ELD L EA
Sbjct: 154 VVRPGLKPIIGQDLAWLFILARMAERV--SADARLLHPVQVVMDYEKTIYDELDLLREAA 211
Query: 240 NSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHE 299
NS ++ NF ++ +Y P+VYW+ K+L+ME + G QV D+ + D
Sbjct: 212 NSSQLRRNF-----EGSDLLYVPQVYWDWCRPKVLVMERIYGLQVTDMAGLADQRTDMKM 266
Query: 300 VSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKEL 358
++ + F +F+ F H D H N+ V S + P+ I ID G+ L
Sbjct: 267 LAERGVEIFFTQIFRDSFFHADMHPGNIFV--------STVNPWAPKYIAIDCGIVGSL 317
>sp|Q2SN14|UBIB_HAHCH Probable ubiquinone biosynthesis protein UbiB OS=Hahella chejuensis
(strain KCTC 2396) GN=ubiB PE=3 SV=1
Length = 546
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 29/282 (10%)
Query: 84 RSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFK 143
R R L+EL G I++K GQ + + L+P++ ++ + +K P + D + +
Sbjct: 54 RLRRALEEL----GPIFVKFGQILSTRKDLLPEDLADELKR-LQDKVPPFASDMAVRIIE 108
Query: 144 KELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVEL 203
+ L ++F DF P+ASAS+AQVH A ++G++V VKV + T D A + L
Sbjct: 109 ESLKSPVSELFADFQTYPMASASIAQVHAATLKNGKEVVVKVIRPGIEKTIRLDIALMLL 168
Query: 204 LVNTL--HW-----LFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIA 256
+ + +W L P +V + ++ ELD EA N+ ++ NF +
Sbjct: 169 VARLVENYWEDGKRLHPV----EVVKDYEHTIIDELDLQREAANTSQLKRNFAG-----S 219
Query: 257 NYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHG 316
IY P+VYW ++ S++L+ME + G + DV+ +RK ++ ++ + F +F+
Sbjct: 220 ELIYIPEVYWEMTHSRVLVMERIYGVPIADVEQLRKANVNMKLLAERGVEIFFTQVFRDS 279
Query: 317 FVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKEL 358
F H D H N+ V + P+ I ID G+ L
Sbjct: 280 FFHADMHPGNIFV--------DVSNPANPRYIAIDCGIVGTL 313
>sp|B2JCV1|UBIB_BURP8 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
phymatum (strain DSM 17167 / STM815) GN=ubiB PE=3 SV=1
Length = 527
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 125/246 (50%), Gaps = 15/246 (6%)
Query: 97 GGIYIKLGQHIG-QLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFD 155
G I++K GQ + + + L P ++ + + ++ P + +K LG D +FD
Sbjct: 60 GPIFVKFGQVLSTRRDLLRPDIATELAK--LQDQVPPFDSAVAIAIIEKSLGAPVDTIFD 117
Query: 156 DFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAADHATVELLVNTLHWL 211
DF+ VP+ASAS+AQVH A + GQ +VAVKV +M +D A + + L
Sbjct: 118 DFERVPVASASIAQVHFATLKIGQHAGKQVAVKVLRPNMLPVIDSDLALLRDIAVWAERL 177
Query: 212 FPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNL 268
+ R +VAE + L ELD + EA N ++ NF L + + P++YW
Sbjct: 178 WADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL-----DLLLVPEMYWEY 232
Query: 269 STSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLL 328
T+ +L+ME + G ++ V ++R G+D +++R + F +F+ GF H D H N+
Sbjct: 233 CTANVLVMERMVGVPISQVDTLRVAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQ 292
Query: 329 VRPVPS 334
V P+
Sbjct: 293 VSLDPA 298
>sp|P73577|Y889_SYNY3 Uncharacterized protein slr0889 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0889 PE=3 SV=1
Length = 408
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 24/293 (8%)
Query: 80 EVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVC 139
E + + L ++ + G YIKLGQ + L+P Y+ + ++ + P + +
Sbjct: 37 EPQIPTPEVLTKILVELGPFYIKLGQLLSTRPDLLPPRYINALT-ALQSNVPPLPWSAIE 95
Query: 140 DVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHA 199
D+ ++E + + F + + PIA+ S+ Q+H A + G+ VA+KV+ + D
Sbjct: 96 DLLQREFPQPLGETFQEIESEPIAAGSIGQIHRAVLQSGETVAIKVKRPGIDVIVEQDSL 155
Query: 200 TV----ELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHI 255
+ ELL L ++D L E +++ EL+F EA + + N K +
Sbjct: 156 LIKDVAELL--ALTEFGQNYDIVKLADEFTQTVKAELNFDTEAAYTNNLRTNLAKTTWFD 213
Query: 256 ANYIYAPKVYWNLSTSKLLIMEFVDG-----AQVNDVKSIRKLGIDPHEVSRLVSQAFAE 310
N + PKVYW L+ K L++E++DG A + S + + E++ L+ +AF +
Sbjct: 214 PNQLVIPKVYWELTNQKFLVLEWLDGVPILTADLTQPPSDKDIAEKKKEITTLLFRAFFQ 273
Query: 311 MMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTK 363
++ GF H DPH N I +L LID G+ LD T+
Sbjct: 274 QLYVDGFFHADPHPGN------------IFYLADGRLALIDCGMVGRLDPRTR 314
>sp|A4XPM5|UBIB_PSEMY Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
mendocina (strain ymp) GN=ubiB PE=3 SV=1
Length = 527
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 21/267 (7%)
Query: 97 GGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDD 156
G I+IK GQ + L+P + + + ++ P DQ + +++LG Q+F
Sbjct: 67 GPIFIKFGQLLSTRRDLLPPDIADEL-ARLQDQVPPFPEDQAIALIERQLGAPVSQLFAR 125
Query: 157 FDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFD 216
FD P+ASAS+AQVH A+ + G++V VKV + D A + LL S D
Sbjct: 126 FDSQPLASASVAQVHAAQLKSGEEVVVKVVRPGLKPVIRQDLAWLFLLARIAE--RASAD 183
Query: 217 YRWL-----VAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTS 271
R L V++ +++ ELD L EA N+ ++ NF + SP +Y P+VYW+L
Sbjct: 184 ARRLRPVEVVSDYEKTIFDELDLLREAANASQLRRNF-EGSP----LLYVPQVYWDLCRH 238
Query: 272 KLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRP 331
++L+ME + G V D+ ++ D ++ + F +F+ F H D H N+ V
Sbjct: 239 QVLVMERIYGVPVTDLATLADQRTDMKLLAERGVEIFFTQVFRDSFFHADMHPGNIFV-- 296
Query: 332 VPSEKKSILGKRKPQLILIDHGLYKEL 358
S PQ I ID G+ L
Sbjct: 297 ------STRTPWSPQYIAIDCGIIGSL 317
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,418,936
Number of Sequences: 539616
Number of extensions: 5574776
Number of successful extensions: 15236
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 14685
Number of HSP's gapped (non-prelim): 210
length of query: 382
length of database: 191,569,459
effective HSP length: 119
effective length of query: 263
effective length of database: 127,355,155
effective search space: 33494405765
effective search space used: 33494405765
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)