Citrus Sinensis ID: 016816

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
MAARSIWRYGGKLAVAATALGGGAALASSDDPATALKLCSAVPVRLVRDSVTAASIAFDYEYSLWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKVLMCSLYFFHL
ccccccHHHHHHHHHHHHHHHHHEEEcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcHHHHHHHHHHHHccccEEEHHHHHHcccccccHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHccccccHHHcHHHHHHEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccEEEcccccccccccEEEEEcccccccccHHHHHHccccHHHHHHHHHHHHHHccccccccccccccccEEECcccccccccccccccCEEEEEccccccccHHHHHHHHHHHHHHHHccccccc
*****IWRYGGKLAVAATALGGGAALASSDDPATALKLCSAVPVRLVRDSVTAASIAFDYEYSLWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKVLMCSLYFFH*
xxxxxxxxxxxHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAARSIWRYGGKLAVAATALGGGAALASSDDPATALKLCSAVPVRLVRDSVTAASIAFDYEYSLWGLPEGSSERAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKVLMCSLYFFHL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Putative ABC1 protein At2g40090 probableO04212

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3ORK, chain A
Confidence level:very confident
Coverage over the Query: 154-194,223-332,345-357
View the alignment between query and template
View the model in PyMOL
Template: 2VUW, chain A
Confidence level:confident
Coverage over the Query: 159-195,214-358
View the alignment between query and template
View the model in PyMOL
Template: 3COM, chain A
Confidence level:confident
Coverage over the Query: 153-192,232-332,345-358
View the alignment between query and template
View the model in PyMOL
Template: 2Y7J, chain A
Confidence level:confident
Coverage over the Query: 147-198,222-239,251-332,345-359
View the alignment between query and template
View the model in PyMOL