Query 016818
Match_columns 382
No_of_seqs 54 out of 56
Neff 3.4
Searched_HMMs 46136
Date Fri Mar 29 03:05:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016818.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016818hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0586 DedA Uncharacterized m 100.0 8.1E-34 1.8E-38 259.3 14.3 166 180-363 18-186 (208)
2 PRK10847 hypothetical protein; 100.0 1.5E-27 3.4E-32 219.0 15.9 139 191-346 45-183 (219)
3 PF09335 SNARE_assoc: SNARE as 99.7 4.5E-18 9.7E-23 138.5 3.0 122 195-340 1-123 (123)
4 COG0398 Uncharacterized conser 98.7 4.4E-08 9.6E-13 91.9 8.7 135 181-342 52-188 (223)
5 COG1238 Predicted membrane pro 98.5 7.9E-08 1.7E-12 87.1 4.7 123 180-328 20-143 (161)
6 COG0575 CdsA CDP-diglyceride s 77.5 1.8 3.9E-05 41.6 2.6 35 235-269 135-169 (265)
7 PRK11624 cdsA CDP-diglyceride 75.9 2.1 4.6E-05 42.0 2.7 34 236-269 154-187 (285)
8 PF06695 Sm_multidrug_ex: Puta 67.0 2.8 6E-05 36.4 1.1 95 234-331 18-119 (121)
9 COG3424 BcsA Predicted naringe 66.9 9.3 0.0002 39.4 4.9 87 158-291 226-312 (356)
10 PRK11677 hypothetical protein; 62.8 11 0.00024 33.9 4.1 44 238-287 5-48 (134)
11 TIGR00383 corA magnesium Mg(2+ 61.6 8.8 0.00019 36.9 3.5 56 322-380 261-316 (318)
12 PF02797 Chal_sti_synt_C: Chal 60.8 4.3 9.4E-05 36.5 1.2 40 251-291 62-101 (151)
13 PRK09546 zntB zinc transporter 59.6 6.7 0.00014 38.4 2.4 50 329-380 273-322 (324)
14 PF01148 CTP_transf_1: Cytidyl 51.7 13 0.00027 34.0 2.7 27 234-260 130-156 (259)
15 PF06295 DUF1043: Protein of u 50.8 21 0.00046 31.3 3.8 42 240-287 3-44 (128)
16 PLN02953 phosphatidate cytidyl 47.4 15 0.00032 38.6 2.7 31 233-263 268-298 (403)
17 PF03616 Glt_symporter: Sodium 46.7 99 0.0021 31.6 8.4 95 189-289 267-368 (368)
18 PLN02594 phosphatidate cytidyl 44.6 17 0.00037 37.3 2.6 33 236-269 127-159 (342)
19 PRK10847 hypothetical protein; 43.2 21 0.00046 33.4 2.8 82 279-363 17-131 (219)
20 PLN03173 chalcone synthase; Pr 42.0 13 0.00027 38.1 1.2 44 247-291 295-338 (391)
21 TIGR01478 STEVOR variant surfa 41.9 22 0.00048 36.0 2.8 15 367-381 275-289 (295)
22 COG4035 Predicted membrane pro 41.5 23 0.00051 30.9 2.6 44 250-295 16-59 (108)
23 PLN03172 chalcone synthase fam 40.7 14 0.0003 37.8 1.3 43 248-291 296-338 (393)
24 PTZ00370 STEVOR; Provisional 40.2 24 0.00051 35.8 2.8 15 367-381 271-285 (296)
25 COG0598 CorA Mg2+ and Co2+ tra 38.8 12 0.00027 36.8 0.6 57 321-380 264-320 (322)
26 PLN02932 3-ketoacyl-CoA syntha 38.3 21 0.00046 37.9 2.2 42 249-291 371-412 (478)
27 cd00831 CHS_like Chalcone and 36.0 18 0.00039 35.5 1.2 43 249-292 281-323 (361)
28 PLN00415 3-ketoacyl-CoA syntha 35.4 26 0.00056 37.4 2.3 42 249-291 357-398 (466)
29 PLN03168 chalcone synthase; Pr 35.4 21 0.00045 36.4 1.5 41 250-291 297-337 (389)
30 PLN03169 chalcone synthase fam 31.9 25 0.00054 35.7 1.5 40 251-291 305-344 (391)
31 PRK10535 macrolide transporter 31.5 39 0.00085 36.5 2.9 31 101-131 263-293 (648)
32 PLN03170 chalcone synthase; Pr 31.0 24 0.00053 36.1 1.2 42 249-291 301-342 (401)
33 PLN03171 chalcone synthase-lik 28.9 39 0.00085 34.5 2.3 38 254-292 312-349 (399)
34 PF14163 SieB: Superinfection 28.8 64 0.0014 28.4 3.3 22 182-203 2-23 (151)
35 PRK10814 outer membrane-specif 27.3 54 0.0012 32.4 2.9 25 107-131 24-48 (399)
36 PF06570 DUF1129: Protein of u 26.2 64 0.0014 29.9 3.0 58 314-380 144-201 (206)
37 PLN02377 3-ketoacyl-CoA syntha 25.6 34 0.00074 36.6 1.2 42 249-291 395-436 (502)
38 PF13908 Shisa: Wnt and FGF in 25.5 43 0.00094 30.2 1.7 26 107-132 74-99 (179)
39 PRK12880 3-oxoacyl-(acyl carri 25.0 26 0.00056 35.0 0.2 40 249-291 262-301 (353)
40 PLN02192 3-ketoacyl-CoA syntha 23.7 45 0.00098 35.9 1.7 42 249-291 399-440 (511)
41 PF01544 CorA: CorA-like Mg2+ 23.1 28 0.0006 32.2 0.0 54 322-378 237-292 (292)
42 PF12732 YtxH: YtxH-like prote 22.9 1E+02 0.0022 24.3 3.1 33 237-270 3-35 (74)
43 PF09335 SNARE_assoc: SNARE as 21.7 1.2E+02 0.0027 24.5 3.6 49 237-287 17-66 (123)
44 PF02659 DUF204: Domain of unk 20.0 1.7E+02 0.0037 22.3 3.8 49 305-354 8-56 (67)
No 1
>COG0586 DedA Uncharacterized membrane-associated protein [Function unknown]
Probab=100.00 E-value=8.1e-34 Score=259.33 Aligned_cols=166 Identities=21% Similarity=0.276 Sum_probs=146.4
Q ss_pred HHHHHHHHHhc---cCccCchhHHHHHHHHHHhhhhccCCccccccccccCCcchhhHHHHHHHHHHHhcchhhhhhhhh
Q 016818 180 WIYFWLLMAAG---SGLFVSEEALNIWVSISLARLLTLDGTWQSFAESFSRNAPYIVSTVLWVYWGVCISDMIPFYLGKL 256 (382)
Q Consensus 180 ~~~F~lLilaG---~GLPIPEEalli~~G~l~s~~l~~~G~lq~~~~~~~~~~~~i~~afl~vY~Gv~iGd~i~Y~LGR~ 256 (382)
+.+|.++.+-. +|.|+|+|++++.+|++++ +|.++. . .+++++.+|+++||.+.|++||+
T Consensus 18 ~~~f~~~f~e~~l~~~~~lPge~iL~~~G~l~~-----~g~~~~--------~----~~i~~~~lga~lGd~i~Y~iGr~ 80 (208)
T COG0586 18 LGVFLILFLESGLLVGPPLPGEVLLLLAGALAA-----QGKLNL--------W----LVILVATLGALLGDLISYWIGRR 80 (208)
T ss_pred HHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHh-----CCCCCH--------H----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666444 9999999999999999999 886666 5 77899999999999999999999
Q ss_pred ccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeEEEEeecccccccchhhhcccCCCCccchhhhhchhhhhhHHHHHH
Q 016818 257 FTKSGASDDVCSKLGISKEKALSITQSVQKYGNLIGFVERFSLGVRNPTAFLAGTMGIPPDCFFAGVCCGGLLTLPIQLV 336 (382)
Q Consensus 257 lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~i~IgRF~PGVRn~~~ylAGmsgmpf~rFa~~~~~gaLiW~~lff~ 336 (382)
+|+ +++++..++..+++++++|+|++++|||+++++++||+||+|+++|+.|||++||+.||++++.+|+++|.+.+++
T Consensus 81 ~G~-~~l~~~~~~~~~~~~~l~~a~~~f~r~G~~~vf~~RFip~vRt~ip~~AG~~~m~~~~F~~~n~~ga~iW~~~~~~ 159 (208)
T COG0586 81 FGR-KLLRKLWSYRLLKRKKLDKAELLFERHGLFAIFLGRFIPGVRTLVPIVAGMSKMPLRRFLLYNILGALLWALVLTL 159 (208)
T ss_pred hcH-HHHHhhhhhccCCHHHHHHHHHHHHHcCchhhhhhcccchhHhhhhHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Confidence 999 8888887765589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcHHHHHHHhhhhhhhhhhhH
Q 016818 337 IGFLLRERPVFALATVATVVGIWTVFP 363 (382)
Q Consensus 337 LG~~LGe~~~~i~~~v~~~vGi~~l~i 363 (382)
+||.+|++++...+....+..++.+.+
T Consensus 160 lGy~~G~~~~~~~~~~~~~~~~~~~~~ 186 (208)
T COG0586 160 LGYLLGEVIDVLVHLLLVLLGILVLAV 186 (208)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 999999999866665555434443333
No 2
>PRK10847 hypothetical protein; Provisional
Probab=99.95 E-value=1.5e-27 Score=219.01 Aligned_cols=139 Identities=19% Similarity=0.203 Sum_probs=123.0
Q ss_pred cCccCchhHHHHHHHHHHhhhhccCCccccccccccCCcchhhHHHHHHHHHHHhcchhhhhhhhhccccCchhhhhhhc
Q 016818 191 SGLFVSEEALNIWVSISLARLLTLDGTWQSFAESFSRNAPYIVSTVLWVYWGVCISDMIPFYLGKLFTKSGASDDVCSKL 270 (382)
Q Consensus 191 ~GLPIPEEalli~~G~l~s~~l~~~G~lq~~~~~~~~~~~~i~~afl~vY~Gv~iGd~i~Y~LGR~lG~~~ll~r~~~Ki 270 (382)
++.|+|+|++++.+|+++++- .|.++. . ..++++++|+++||++.|++||++|+ +++++..+|.
T Consensus 45 ~~~~lPge~~l~~~G~la~~~---~~~~~~--------~----~~~~~a~~Ga~lG~~i~Y~lGr~~G~-~~l~~~~~~~ 108 (219)
T PRK10847 45 VTPFLPGDSLLFVAGALASLP---TNDLNV--------H----MMVALMLIAAIVGDAVNYTIGRLFGE-KLFSNPNSKI 108 (219)
T ss_pred cCCCCCchHHHHHHHHHHhCC---CCCCCH--------H----HHHHHHHHHHHHHHHHHHHHHHHhCH-HHhhcccccc
Confidence 578899999999999998821 132333 2 56788999999999999999999999 7776655554
Q ss_pred CCChHHHHHHHHHHHhhcCeEEEEeecccccccchhhhcccCCCCccchhhhhchhhhhhHHHHHHHHHHhcCcHH
Q 016818 271 GISKEKALSITQSVQKYGNLIGFVERFSLGVRNPTAFLAGTMGIPPDCFFAGVCCGGLLTLPIQLVIGFLLRERPV 346 (382)
Q Consensus 271 ~it~eki~kie~~~qKYGn~~i~IgRF~PGVRn~~~ylAGmsgmpf~rFa~~~~~gaLiW~~lff~LG~~LGe~~~ 346 (382)
+++++++|++++++|||.++++++||+||+|+.+++.||+++||++||+..+.+|+++|...+.++||++|+...
T Consensus 109 -~~~~~l~~~~~~~~r~G~~~v~i~RfiP~~R~~~~~~aG~~~m~~~~F~~~~~lg~~~W~~~~~~~Gy~~g~~~~ 183 (219)
T PRK10847 109 -FRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGTLPF 183 (219)
T ss_pred -CCHHHHHHHHHHHHHcCCEEEEeeCCccchHhHHHHHhHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 788899999999999999999999999999999999999999999999999999999999999999999998743
No 3
>PF09335 SNARE_assoc: SNARE associated Golgi protein; InterPro: IPR015414 This is a entry contains SNARE associated Golgi proteins. The yeast member of this family (P36164 from SWISSPROT) localises with the t-SNARE Tlg2 [].
Probab=99.70 E-value=4.5e-18 Score=138.48 Aligned_cols=122 Identities=22% Similarity=0.348 Sum_probs=104.8
Q ss_pred CchhHHHHHHHHHHhhhhccCCccccccccccCCcchhhHHHHHHHHHHHhcchhhhhhhhhccccCchhhhhhhcCCCh
Q 016818 195 VSEEALNIWVSISLARLLTLDGTWQSFAESFSRNAPYIVSTVLWVYWGVCISDMIPFYLGKLFTKSGASDDVCSKLGISK 274 (382)
Q Consensus 195 IPEEalli~~G~l~s~~l~~~G~lq~~~~~~~~~~~~i~~afl~vY~Gv~iGd~i~Y~LGR~lG~~~ll~r~~~Ki~it~ 274 (382)
||.|++++.+|++.+. . ..++..++|.++|+++.|++||.+|++...+++.++. ..
T Consensus 1 iP~~~~~~~~g~~~g~------------------~----~~~~~~~~g~~~g~~~~y~lgr~~~~~~~~~~~~~~~--~~ 56 (123)
T PF09335_consen 1 IPGSILLIAAGALFGP------------------W----LGFLIATLGAVLGSLLAYLLGRYFGRRRLRRKLRKKK--RI 56 (123)
T ss_pred CChHHHHHHHHHHHHH------------------H----HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchH--HH
Confidence 6899999999988762 2 4578889999999999999999999734444443222 12
Q ss_pred HHHHHHHHHHHhhcCeEEEEeeccccc-ccchhhhcccCCCCccchhhhhchhhhhhHHHHHHHHHH
Q 016818 275 EKALSITQSVQKYGNLIGFVERFSLGV-RNPTAFLAGTMGIPPDCFFAGVCCGGLLTLPIQLVIGFL 340 (382)
Q Consensus 275 eki~kie~~~qKYGn~~i~IgRF~PGV-Rn~~~ylAGmsgmpf~rFa~~~~~gaLiW~~lff~LG~~ 340 (382)
++++++++++||||.+.+++.|++|++ |+++.|.+|+.+||+++|+..+..|.+.|..++..+|++
T Consensus 57 ~~~~~~~~~~~~~g~~~l~~~~~~P~~P~~~~~~~ag~~~~~~~~f~~~~~~g~~~~~~~~~~~G~~ 123 (123)
T PF09335_consen 57 KRIERIERWFQKYGFWVLFLSRFIPGLPFDVVNYLAGITRMPFRRFFLASLIGKLPWTILYVLLGYL 123 (123)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHccHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 456669999999999999999999998 999999999999999999999999999999999999974
No 4
>COG0398 Uncharacterized conserved protein [Function unknown]
Probab=98.72 E-value=4.4e-08 Score=91.94 Aligned_cols=135 Identities=18% Similarity=0.200 Sum_probs=110.4
Q ss_pred HHHHHHHHhccCccCchhHHHHHHHHHHhhhhccCCccccccccccCCcchhhHHHHHHHHHHHhcchhhhhhhhhcccc
Q 016818 181 IYFWLLMAAGSGLFVSEEALNIWVSISLARLLTLDGTWQSFAESFSRNAPYIVSTVLWVYWGVCISDMIPFYLGKLFTKS 260 (382)
Q Consensus 181 ~~F~lLilaG~GLPIPEEalli~~G~l~s~~l~~~G~lq~~~~~~~~~~~~i~~afl~vY~Gv~iGd~i~Y~LGR~lG~~ 260 (382)
++|.++.+-=.=.++|-.++.+.+|.+-.- . --++..+.|...|.+++|+++|.+|+
T Consensus 52 ~~fil~~l~~~~~~iP~~il~l~~g~ifG~------------------~----~G~~~s~~G~~~gs~~~Fll~R~~gr- 108 (223)
T COG0398 52 VFFILLYLVATLPIIPGSILTLAGGLLFGP------------------F----LGFLYSLIGATAGSTLAFLLARYLGR- 108 (223)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHh------------------H----HHHHHHHHHHHHHHHHHHHHHHHHhH-
Confidence 447777777667778888888888866651 1 23677789999999999999999999
Q ss_pred CchhhhhhhcCCChHHHHHHHHHHHhhcCeEEEEeeccccc-ccchhhhcccCCCCccchhhhhchhhhhhHHHHHHHHH
Q 016818 261 GASDDVCSKLGISKEKALSITQSVQKYGNLIGFVERFSLGV-RNPTAFLAGTMGIPPDCFFAGVCCGGLLTLPIQLVIGF 339 (382)
Q Consensus 261 ~ll~r~~~Ki~it~eki~kie~~~qKYGn~~i~IgRF~PGV-Rn~~~ylAGmsgmpf~rFa~~~~~gaLiW~~lff~LG~ 339 (382)
.. ..+++ -++|+.++.+++++|+|.+.+++-|.+|.+ =+.+.|.+|.++|++++|++...+|.+.++..+..+|.
T Consensus 109 ~~---~~~~~-~~~~~~~~~~~~~~~~g~~~i~~lrl~P~~P~~lvn~aaglt~is~~~f~ias~lG~~P~~i~y~~~G~ 184 (223)
T COG0398 109 DW---VLKFV-GGKEKVQRIDAGLERNGFWAILLLRLIPIFPFDLVNYAAGLTGISFRDFAIATLLGKLPGTIVYTYLGS 184 (223)
T ss_pred HH---HHHHh-cccHHHHHHHHHHHhCChHHHHHHHHhhcCCHHHHHHHHhccCCcHHHHHHHHHHhcccHHHHHHHHHH
Confidence 22 22333 233699999999999999999999998844 57889999999999999999999999999999999995
Q ss_pred -Hhc
Q 016818 340 -LLR 342 (382)
Q Consensus 340 -~LG 342 (382)
+.+
T Consensus 185 ~~~~ 188 (223)
T COG0398 185 AFLG 188 (223)
T ss_pred HHhc
Confidence 443
No 5
>COG1238 Predicted membrane protein [Function unknown]
Probab=98.54 E-value=7.9e-08 Score=87.11 Aligned_cols=123 Identities=17% Similarity=0.115 Sum_probs=93.5
Q ss_pred HHHHHHHHHhccCccCchhHHHHHHHHHHhhhhccCCccccccccccCCcchhhHHHHHHHHHHHhcchhhhhhhhhccc
Q 016818 180 WIYFWLLMAAGSGLFVSEEALNIWVSISLARLLTLDGTWQSFAESFSRNAPYIVSTVLWVYWGVCISDMIPFYLGKLFTK 259 (382)
Q Consensus 180 ~~~F~lLilaG~GLPIPEEalli~~G~l~s~~l~~~G~lq~~~~~~~~~~~~i~~afl~vY~Gv~iGd~i~Y~LGR~lG~ 259 (382)
|-.|+.=.+...=+|+|.|++++- .+. .| .+. . ...+++-+|..+|.++.|++||..++
T Consensus 20 ~~Lf~vaF~eat~lP~~sE~~l~~--m~~------~~-~~~--------~----~~~~vAt~gs~lG~~~~y~lG~~~~~ 78 (161)
T COG1238 20 AGLFIVAFLEATLLPVPSEVLLAP--MLL------LG-LNA--------W----ILALVATLGSVLGGLVNYALGRFLPE 78 (161)
T ss_pred HHHHHHHHHHHHhcCCChHHHHHH--HHH------cC-Cch--------H----HHHHHHHHHhhHhHHHHHHHHhcchH
Confidence 334555556677799999998876 222 22 222 2 34677788999999999999999999
Q ss_pred cCchhhhhhhcCCChHHHHHHHH-HHHhhcCeEEEEeecccccccchhhhcccCCCCccchhhhhchhhh
Q 016818 260 SGASDDVCSKLGISKEKALSITQ-SVQKYGNLIGFVERFSLGVRNPTAFLAGTMGIPPDCFFAGVCCGGL 328 (382)
Q Consensus 260 ~~ll~r~~~Ki~it~eki~kie~-~~qKYGn~~i~IgRF~PGVRn~~~ylAGmsgmpf~rFa~~~~~gaL 328 (382)
....+ |..-++++.++.++ +++|||.++++++-|+|.= -++...||..+|++.+|.+..++|=.
T Consensus 79 -~~~~~---~~~~~~~~~~~~~~~~~~ryg~~~ll~s~lp~ig-d~~t~~aG~~~~~~~~f~~~~~igk~ 143 (161)
T COG1238 79 -FIARR---WFPGSEEALEKLQEKWYRRYGVWTLLLSWLPPIG-DVLTLLAGWLRLNFLPFILLVFLGKA 143 (161)
T ss_pred -HHHHH---hhcchHHHHHHHHHHHHHHHHHHHHHHHhccccc-hHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 55554 33223578888886 9999999999999995544 99999999999999999988876643
No 6
>COG0575 CdsA CDP-diglyceride synthetase [Lipid metabolism]
Probab=77.47 E-value=1.8 Score=41.62 Aligned_cols=35 Identities=23% Similarity=0.525 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhcchhhhhhhhhccccCchhhhhhh
Q 016818 235 TVLWVYWGVCISDMIPFYLGKLFTKSGASDDVCSK 269 (382)
Q Consensus 235 afl~vY~Gv~iGd~i~Y~LGR~lG~~~ll~r~~~K 269 (382)
..+...++++.+|+.+|+.||.+|+.|+..+..+|
T Consensus 135 ~~l~l~~~vw~~Di~Ayf~Gr~fGk~kl~p~iSP~ 169 (265)
T COG0575 135 LLLLLFLGVWAGDIGAYFVGRRFGKHKLAPKISPK 169 (265)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHcCCCCCCCcCCCC
Confidence 35667889999999999999999996655554333
No 7
>PRK11624 cdsA CDP-diglyceride synthase; Provisional
Probab=75.89 E-value=2.1 Score=42.00 Aligned_cols=34 Identities=29% Similarity=0.354 Sum_probs=27.2
Q ss_pred HHHHHHHHHhcchhhhhhhhhccccCchhhhhhh
Q 016818 236 VLWVYWGVCISDMIPFYLGKLFTKSGASDDVCSK 269 (382)
Q Consensus 236 fl~vY~Gv~iGd~i~Y~LGR~lG~~~ll~r~~~K 269 (382)
++..+.=++.+|+.+|+.||.+|+.|+..++.+|
T Consensus 154 vl~l~~~vw~sDt~AYf~Gr~fGk~KL~P~ISPk 187 (285)
T PRK11624 154 LLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPG 187 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCCCC
Confidence 4556666889999999999999997777765444
No 8
>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins.
Probab=66.99 E-value=2.8 Score=36.40 Aligned_cols=95 Identities=17% Similarity=0.151 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHhcchhhhhhhh----hccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeEEEE--eecccccccch-h
Q 016818 234 STVLWVYWGVCISDMIPFYLGK----LFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLIGFV--ERFSLGVRNPT-A 306 (382)
Q Consensus 234 ~afl~vY~Gv~iGd~i~Y~LGR----~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~i~I--gRF~PGVRn~~-~ 306 (382)
.++++.++|.++..-+.++.=+ ++-+.+..+++.+|+ .||.+|.++++||||-+.+.+ +==+||-=--+ +
T Consensus 18 ~~~~~~~lGN~l~vp~i~~~~~~i~~~l~~~~~~~~~~~~~---~~k~~~~~~~i~kyg~~GL~lFVaIPlP~TG~wtga 94 (121)
T PF06695_consen 18 EAFLLAFLGNILPVPFILLFLDKILKWLKRKPWLKKFYEWL---EKKAEKKSKKIEKYGFWGLALFVAIPLPGTGAWTGA 94 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHHHHHHHHHHHhHHHHHHHHhCCCCcchHHHHH
Confidence 3455556666654433332222 222234555555554 568888999999999654432 11123322222 3
Q ss_pred hhcccCCCCccchhhhhchhhhhhH
Q 016818 307 FLAGTMGIPPDCFFAGVCCGGLLTL 331 (382)
Q Consensus 307 ylAGmsgmpf~rFa~~~~~gaLiW~ 331 (382)
..|=+.+|+.++=++...+|.+++.
T Consensus 95 l~a~llg~~~~~~~~ai~~Gv~ia~ 119 (121)
T PF06695_consen 95 LIASLLGMDKKKAFLAIFLGVLIAG 119 (121)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 3344455555555555555555443
No 9
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=66.86 E-value=9.3 Score=39.35 Aligned_cols=87 Identities=22% Similarity=0.206 Sum_probs=64.5
Q ss_pred CCcceeeeecceEEeccCCChhHHHHHHHHHhccCccCchhHHHHHHHHHHhhhhccCCccccccccccCCcchhhHHHH
Q 016818 158 APSGFSFKVFGYKFILPEYAPGWIYFWLLMAAGSGLFVSEEALNIWVSISLARLLTLDGTWQSFAESFSRNAPYIVSTVL 237 (382)
Q Consensus 158 ~~~g~tf~~fg~~~iip~~~pg~~~F~lLilaG~GLPIPEEalli~~G~l~s~~l~~~G~lq~~~~~~~~~~~~i~~afl 237 (382)
..+|++++-=|+|+++-++-|+.|-=||= -.+ -.|+
T Consensus 226 ~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~-------------------~~V-------------------------~~fL 261 (356)
T COG3424 226 DIMGWDVGDQGLKVVLSRDLPNLIESYLA-------------------PNV-------------------------TTFL 261 (356)
T ss_pred cccceeecCCcEEEEEcCchhHHHHHHhh-------------------hhH-------------------------HHHH
Confidence 67999999999999999999987655431 011 1233
Q ss_pred HHHHHHHhcchhhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 238 WVYWGVCISDMIPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 238 ~vY~Gv~iGd~i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+.+ | +..+=|.-|+-.=-|+ +.++.+-+-+++++|.++.+.+-++||||..
T Consensus 262 ~~~-~-ls~~dI~~w~~HPGG~-KVida~~~sLgls~e~l~~s~~~L~~~GNMS 312 (356)
T COG3424 262 ATH-G-LSIEDIEAWVVHPGGP-KVIDAYEESLGLSPEALELSWDVLREYGNMS 312 (356)
T ss_pred HHc-C-CchhhhceeeeCCCCc-hHHHHHHHhcCCCHHHHHHHHHHHHHhCCcc
Confidence 332 2 2223344455566677 9999999999999999999999999999963
No 10
>PRK11677 hypothetical protein; Provisional
Probab=62.80 E-value=11 Score=33.89 Aligned_cols=44 Identities=9% Similarity=0.121 Sum_probs=28.8
Q ss_pred HHHHHHHhcchhhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhh
Q 016818 238 WVYWGVCISDMIPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKY 287 (382)
Q Consensus 238 ~vY~Gv~iGd~i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKY 287 (382)
.+.+|.++|..|+|+++|+... ...+ -+++ ++.+++++.-+++|
T Consensus 5 ~a~i~livG~iiG~~~~R~~~~-~~~~--q~~l---e~eLe~~k~ele~Y 48 (134)
T PRK11677 5 YALIGLVVGIIIGAVAMRFGNR-KLRQ--QQAL---QYELEKNKAELEEY 48 (134)
T ss_pred HHHHHHHHHHHHHHHHHhhccc-hhhH--HHHH---HHHHHHHHHHHHHH
Confidence 3457899999999999998665 3211 1222 34667776666665
No 11
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=61.62 E-value=8.8 Score=36.88 Aligned_cols=56 Identities=11% Similarity=0.055 Sum_probs=32.7
Q ss_pred hhchhhhhhHHHHHHHHHHhcCcHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHhhhcc
Q 016818 322 GVCCGGLLTLPIQLVIGFLLRERPVFALATVATVVGIWTVFPYAVAASTAIFLYLRHRY 380 (382)
Q Consensus 322 ~~~~gaLiW~~lff~LG~~LGe~~~~i~~~v~~~vGi~~l~i~avai~~av~~~~kkr~ 380 (382)
+...++++--|++ ..| ++|.|+..+=..-.+| |+++++.+.++++++.++|.|||+
T Consensus 261 LTvvt~IflP~t~-IaG-iyGMNf~~mP~l~~~~-gy~~~l~~m~~i~~~~~~~fkrk~ 316 (318)
T TIGR00383 261 LTVVSTIFIPLTF-IAG-IYGMNFKFMPELNWKY-GYPAVLIVMAVIALGPLIYFRRKG 316 (318)
T ss_pred HHHHHHHHHHHHH-HHH-HHhCCcccCccccchh-HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3444444444444 334 3788876665666664 888877765555555565666554
No 12
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=60.83 E-value=4.3 Score=36.54 Aligned_cols=40 Identities=25% Similarity=0.352 Sum_probs=31.8
Q ss_pred hhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 251 FYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 251 Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+|+=.==|+ ++++.+.+++++++++++-+.+.++.|||..
T Consensus 62 ~wavHPGG~-~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmS 101 (151)
T PF02797_consen 62 FWAVHPGGR-KILDAVEEALGLSPEQLRASREVLREYGNMS 101 (151)
T ss_dssp EEEEE-SSH-HHHHHHHHHHTS-GGGGHHHHHHHHHH-B-G
T ss_pred eeeecCChH-HHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC
Confidence 455566677 9999999999999999999999999999963
No 13
>PRK09546 zntB zinc transporter; Reviewed
Probab=59.61 E-value=6.7 Score=38.35 Aligned_cols=50 Identities=12% Similarity=0.064 Sum_probs=30.4
Q ss_pred hhHHHHHHHHHHhcCcHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHhhhcc
Q 016818 329 LTLPIQLVIGFLLRERPVFALATVATVVGIWTVFPYAVAASTAIFLYLRHRY 380 (382)
Q Consensus 329 iW~~lff~LG~~LGe~~~~i~~~v~~~vGi~~l~i~avai~~av~~~~kkr~ 380 (382)
+.+|.=+.-|. +|.|+..+=..-.. +|+|+++.+.+++++++++|.|||+
T Consensus 273 IflPlT~IaGi-yGMNf~~mPel~~~-~gy~~~l~im~~i~~~~~~~fkrk~ 322 (324)
T PRK09546 273 VFLPTTFLTGL-FGVNLGGIPGGGWP-FGFSIFCLLLVVLIGGVAWWLKRSK 322 (324)
T ss_pred HHHHHHHHHhh-hccccCCCCCcCCc-chHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34455555554 78887655555556 4888776655555555565666654
No 14
>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2.7.7.41 from EC) [, , ] (also known as CDP- diacylglycerol synthase) (CDS) is the enzyme that catalyzes the synthesis of CDP-diacylglycerol from CTP and phosphatidate (PA): CTP + phosphatidate = diphosphate + CDP-diacylglycerol CDP-diacylglycerol is an important branch point intermediate in both prokaryotic and eukaryotic organisms. CDS is a membrane-bound enzyme.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016020 membrane
Probab=51.73 E-value=13 Score=33.98 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhcchhhhhhhhhcccc
Q 016818 234 STVLWVYWGVCISDMIPFYLGKLFTKS 260 (382)
Q Consensus 234 ~afl~vY~Gv~iGd~i~Y~LGR~lG~~ 260 (382)
...+...+-++.||+.+|..||++|+.
T Consensus 130 ~~~~~~i~~~~~gD~~A~l~G~~fGk~ 156 (259)
T PF01148_consen 130 PLALIGILILGIGDSFAYLVGRRFGKH 156 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 345667788899999999999999993
No 15
>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=50.79 E-value=21 Score=31.26 Aligned_cols=42 Identities=21% Similarity=0.463 Sum_probs=27.4
Q ss_pred HHHHHhcchhhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhh
Q 016818 240 YWGVCISDMIPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKY 287 (382)
Q Consensus 240 Y~Gv~iGd~i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKY 287 (382)
.+|.++|..|+|+++|+... ...+. +++ ++.+++++.-+++|
T Consensus 3 ~i~lvvG~iiG~~~~r~~~~-~~~~q--~~l---~~eL~~~k~el~~y 44 (128)
T PF06295_consen 3 IIGLVVGLIIGFLIGRLTSS-NQQKQ--AKL---EQELEQAKQELEQY 44 (128)
T ss_pred HHHHHHHHHHHHHHHHHhcc-chhhH--HHH---HHHHHHHHHHHHHH
Confidence 45778888999999999877 33221 222 34666666666665
No 16
>PLN02953 phosphatidate cytidylyltransferase
Probab=47.42 E-value=15 Score=38.62 Aligned_cols=31 Identities=26% Similarity=0.425 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHHhcchhhhhhhhhccccCch
Q 016818 233 VSTVLWVYWGVCISDMIPFYLGKLFTKSGAS 263 (382)
Q Consensus 233 ~~afl~vY~Gv~iGd~i~Y~LGR~lG~~~ll 263 (382)
...++.++..++.+|+.+|+.||.+|+.++.
T Consensus 268 l~~~l~~~~~vw~~Di~AY~~G~~fGk~kl~ 298 (403)
T PLN02953 268 LVATLISFSGVIATDTFAFLGGKAFGRTPLT 298 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 4556777889999999999999999996654
No 17
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=46.75 E-value=99 Score=31.61 Aligned_cols=95 Identities=15% Similarity=0.197 Sum_probs=60.7
Q ss_pred hccCccCchhHHHHHHHHHHhhhhccCCccccccccccCCcchhhHHHHHHHHHHHhcchhhhh-hhhhccccCchhhh-
Q 016818 189 AGSGLFVSEEALNIWVSISLARLLTLDGTWQSFAESFSRNAPYIVSTVLWVYWGVCISDMIPFY-LGKLFTKSGASDDV- 266 (382)
Q Consensus 189 aG~GLPIPEEalli~~G~l~s~~l~~~G~lq~~~~~~~~~~~~i~~afl~vY~Gv~iGd~i~Y~-LGR~lG~~~ll~r~- 266 (382)
.+..- |+++.+...+|+.+.-.++ ....+- ....-.++..|.++....+++.-....++ .-|.+|+ ..-..+
T Consensus 267 ~~~~~-id~~~i~~I~~~sL~~fl~-~almsl---~l~~l~~~a~Plliil~~q~i~~~~f~~fv~fr~~gk-dydaavm 340 (368)
T PF03616_consen 267 TGKYK-IDRKTIDRISGISLDLFLA-MALMSL---KLWVLADYALPLLIILAVQTILMVLFAYFVTFRVMGK-DYDAAVM 340 (368)
T ss_pred hCccc-CCHHHHHHHHHHHHHHHHH-HHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCC-ChhHHHH
Confidence 34444 8999999999977664433 111111 11112556667777667777765555544 5778888 432222
Q ss_pred -----hhhcCCChHHHHHHHHHHHhhcC
Q 016818 267 -----CSKLGISKEKALSITQSVQKYGN 289 (382)
Q Consensus 267 -----~~Ki~it~eki~kie~~~qKYGn 289 (382)
+--+|.||+-+.-.|..-||||+
T Consensus 341 ~~G~~G~glGatp~a~anm~~v~~~ygp 368 (368)
T PF03616_consen 341 SAGFCGFGLGATPNAMANMQAVTEKYGP 368 (368)
T ss_pred hhhhhccCCCccHHHHHHHHHHHHhhCc
Confidence 24568999999999999999995
No 18
>PLN02594 phosphatidate cytidylyltransferase
Probab=44.59 E-value=17 Score=37.34 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcchhhhhhhhhccccCchhhhhhh
Q 016818 236 VLWVYWGVCISDMIPFYLGKLFTKSGASDDVCSK 269 (382)
Q Consensus 236 fl~vY~Gv~iGd~i~Y~LGR~lG~~~ll~r~~~K 269 (382)
++....-++..|+.+|+.||.+|+.|+. ++.+|
T Consensus 127 ~~l~~~lV~~nDi~AY~~G~~fGk~kL~-~iSPk 159 (342)
T PLN02594 127 FLLPASLIVINDIAAYLFGFFFGRTPLI-KLSPK 159 (342)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhcCCCCC-ccCCC
Confidence 4555667899999999999999997776 54333
No 19
>PRK10847 hypothetical protein; Provisional
Probab=43.16 E-value=21 Score=33.43 Aligned_cols=82 Identities=21% Similarity=0.227 Sum_probs=54.3
Q ss_pred HHHHHHHhhcCeEE---E----------Eeecccccccchhhhcc----c--CCCCccchhhhhchhhhhhHHHHHHHHH
Q 016818 279 SITQSVQKYGNLIG---F----------VERFSLGVRNPTAFLAG----T--MGIPPDCFFAGVCCGGLLTLPIQLVIGF 339 (382)
Q Consensus 279 kie~~~qKYGn~~i---~----------IgRF~PGVRn~~~ylAG----m--sgmpf~rFa~~~~~gaLiW~~lff~LG~ 339 (382)
.+++++++||.+.. + ++=++||= .+-.++| . ..+++.--++.+..|+++=..+.+.+|+
T Consensus 17 ~~~~~~~~~g~~~y~~lfl~~~le~~~~~~~~lPge--~~l~~~G~la~~~~~~~~~~~~~~~a~~Ga~lG~~i~Y~lGr 94 (219)
T PRK10847 17 HLAELVAQYGVWVYAILFLILFCETGLVVTPFLPGD--SLLFVAGALASLPTNDLNVHMMVALMLIAAIVGDAVNYTIGR 94 (219)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhccccCCCCCch--HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999998752 1 22334532 2333333 2 2366666678899999999999999999
Q ss_pred HhcCcH--------------HHHHHHhhhhhhhhhhhH
Q 016818 340 LLRERP--------------VFALATVATVVGIWTVFP 363 (382)
Q Consensus 340 ~LGe~~--------------~~i~~~v~~~vGi~~l~i 363 (382)
.+|+++ +.+.+..+++ |.+++++
T Consensus 95 ~~G~~~l~~~~~~~~~~~~l~~~~~~~~r~-G~~~v~i 131 (219)
T PRK10847 95 LFGEKLFSNPNSKIFRRSYLDKTHQFYEKH-GGKTIIL 131 (219)
T ss_pred HhCHHHhhccccccCCHHHHHHHHHHHHHc-CCEEEEe
Confidence 998654 3445566774 7776554
No 20
>PLN03173 chalcone synthase; Provisional
Probab=41.97 E-value=13 Score=38.08 Aligned_cols=44 Identities=23% Similarity=0.269 Sum_probs=38.5
Q ss_pred chhhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 247 DMIPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 247 d~i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+-+-+|+=.--|+ +.++.+.+++++++|++..+-..+++|||..
T Consensus 295 ~di~~~v~Hqgg~-~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtS 338 (391)
T PLN03173 295 WNSLFWIAHPGGP-AILDQVEAKLALKPEKLRATRHVLSEYGNMS 338 (391)
T ss_pred cccCeEEECCCcH-HHHHHHHHHcCCChHHHHHHHHHHHHhCcch
Confidence 3366788888888 9999999999999999999999999999964
No 21
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=41.86 E-value=22 Score=36.04 Aligned_cols=15 Identities=33% Similarity=0.401 Sum_probs=10.8
Q ss_pred HHHHHHHHHhhhccc
Q 016818 367 AASTAIFLYLRHRYS 381 (382)
Q Consensus 367 ai~~av~~~~kkr~~ 381 (382)
+++..+|+|+|||+|
T Consensus 275 liiLYiWlyrrRK~s 289 (295)
T TIGR01478 275 LIILYIWLYRRRKKS 289 (295)
T ss_pred HHHHHHHHHHhhccc
Confidence 344578888888876
No 22
>COG4035 Predicted membrane protein [Function unknown]
Probab=41.54 E-value=23 Score=30.87 Aligned_cols=44 Identities=14% Similarity=0.100 Sum_probs=22.8
Q ss_pred hhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeEEEEe
Q 016818 250 PFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLIGFVE 295 (382)
Q Consensus 250 ~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~i~Ig 295 (382)
.|.+|-..|. -.+.|.-+.. .-+|++|+..-.+.-.|=-++..+
T Consensus 16 ~Fi~Gs~iGL-eySYRkY~ep-fve~~iDp~aL~iaV~GwtiL~ns 59 (108)
T COG4035 16 LFIIGSFIGL-EYSYRKYSEP-FVEKGIDPFALAIAVFGWTILINS 59 (108)
T ss_pred HHHHHHHHHH-hhhHhhccch-HhhcCCChHHHHHHHhcceeeeee
Confidence 3444544444 3333322332 223466777777777886555555
No 23
>PLN03172 chalcone synthase family protein; Provisional
Probab=40.73 E-value=14 Score=37.80 Aligned_cols=43 Identities=23% Similarity=0.296 Sum_probs=37.7
Q ss_pred hhhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 248 MIPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 248 ~i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
-+-+|+-.--|+ +.++.+.++++++++++..+-..+++|||..
T Consensus 296 di~~~~~Hqgg~-~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtS 338 (393)
T PLN03172 296 NSIFWIAHPGGP-AILDQVEIKLDLKEEKLRATRHVLSDYGNMS 338 (393)
T ss_pred ccceEEecCCcH-HHHHHHHHHcCCCHHHHHHHHHHHHHhCccH
Confidence 355677888888 9999999999999999999889999999964
No 24
>PTZ00370 STEVOR; Provisional
Probab=40.20 E-value=24 Score=35.83 Aligned_cols=15 Identities=33% Similarity=0.417 Sum_probs=10.7
Q ss_pred HHHHHHHHHhhhccc
Q 016818 367 AASTAIFLYLRHRYS 381 (382)
Q Consensus 367 ai~~av~~~~kkr~~ 381 (382)
+++..+|+|+|||+|
T Consensus 271 liilYiwlyrrRK~s 285 (296)
T PTZ00370 271 LIILYIWLYRRRKNS 285 (296)
T ss_pred HHHHHHHHHHhhcch
Confidence 344578888888876
No 25
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=38.83 E-value=12 Score=36.77 Aligned_cols=57 Identities=9% Similarity=-0.016 Sum_probs=38.7
Q ss_pred hhhchhhhhhHHHHHHHHHHhcCcHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHhhhcc
Q 016818 321 AGVCCGGLLTLPIQLVIGFLLRERPVFALATVATVVGIWTVFPYAVAASTAIFLYLRHRY 380 (382)
Q Consensus 321 ~~~~~gaLiW~~lff~LG~~LGe~~~~i~~~v~~~vGi~~l~i~avai~~av~~~~kkr~ 380 (382)
.+...++++--|++++ =++|.|+..+=+.-.+| |+|.+++..+++++++++|.|||+
T Consensus 264 ~LTi~s~iflPpTlIa--giyGMNf~~mPel~~~~-Gy~~~l~~m~~~~~~~~~~frrk~ 320 (322)
T COG0598 264 ILTIVSTIFLPPTLIT--GFYGMNFKGMPELDWPY-GYPIALILMLLLALLLYLYFRRKG 320 (322)
T ss_pred HHHHHHHHHHhhHHHH--cccccCCCCCcCCCCcc-cHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3445555665565543 46788988766666674 999888876666667777777665
No 26
>PLN02932 3-ketoacyl-CoA synthase
Probab=38.35 E-value=21 Score=37.93 Aligned_cols=42 Identities=10% Similarity=0.150 Sum_probs=37.3
Q ss_pred hhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 249 IPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 249 i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+-+|+=..-|+ ..++.+.+++++++++++++-.-++||||-.
T Consensus 371 id~f~iHqggr-~IIdav~k~LgL~~~~~e~s~~tL~rfGNTS 412 (478)
T PLN02932 371 FEHFCIHAGGR-ALIDEMEKNLHLTPLDVEASRMTLHRFGNTS 412 (478)
T ss_pred hceEEEccCCH-HHHHHHHHHcCCChHHHHHHHHHHHHhCChh
Confidence 44677777788 9999999999999999999999999999964
No 27
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=36.03 E-value=18 Score=35.49 Aligned_cols=43 Identities=21% Similarity=0.273 Sum_probs=37.1
Q ss_pred hhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeEE
Q 016818 249 IPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLIG 292 (382)
Q Consensus 249 i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~i 292 (382)
+-|++-...++ +.++.+.+++++.+|++......+++|||..-
T Consensus 281 id~~~~H~~~~-~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~s 323 (361)
T cd00831 281 FDHWCVHPGGR-AVLDAVEKALGLSPEDLEASRMVLRRYGNMSS 323 (361)
T ss_pred ceEEEECCCCh-HHHHHHHHHcCCCHHHHHHHHHHHHHhCCchh
Confidence 66777777777 88899999999999888887889999999864
No 28
>PLN00415 3-ketoacyl-CoA synthase
Probab=35.43 E-value=26 Score=37.37 Aligned_cols=42 Identities=17% Similarity=0.181 Sum_probs=35.1
Q ss_pred hhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 249 IPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 249 i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+-+|.=.--|+ +++|.+.+.+++++++++.+-..+.+|||..
T Consensus 357 ~~hf~iHpGGr-aVLdave~~LgL~~~~le~Sr~vL~r~GN~S 398 (466)
T PLN00415 357 FKHFCIHAGGR-ALLDAVEKGLGLSEFDLEPSRMTLHRFGNTS 398 (466)
T ss_pred ceeEEecCCcH-HHHHHHHHHcCCCHHHHHHHHHHHHHhCCch
Confidence 33444455566 8999999999999999999999999999964
No 29
>PLN03168 chalcone synthase; Provisional
Probab=35.38 E-value=21 Score=36.40 Aligned_cols=41 Identities=22% Similarity=0.284 Sum_probs=35.8
Q ss_pred hhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 250 PFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 250 ~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
-+|+=.--|+ +.++.+.+++++.+|++...-+.+++|||..
T Consensus 297 ~~~v~Hqgg~-~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtS 337 (389)
T PLN03168 297 MFWAVHPGGP-AILDQVEAKLKLTKDKMQGSRDILSEFGNMS 337 (389)
T ss_pred ceEEecCCcH-HHHHHHHHHcCCCHHHHHHHHHHHHHhCccH
Confidence 3577777788 9999999999999999988888999999964
No 30
>PLN03169 chalcone synthase family protein; Provisional
Probab=31.92 E-value=25 Score=35.73 Aligned_cols=40 Identities=20% Similarity=0.242 Sum_probs=35.1
Q ss_pred hhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 251 FYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 251 Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+|+-..-++ ..++.+.+++++.+|++...-..+++|||..
T Consensus 305 ~~v~Hq~n~-~il~~v~~~Lgl~~ek~~~s~~~l~~~GNts 344 (391)
T PLN03169 305 FWAVHPGGP-AILNRLEKKLKLAPEKLECSRRALMDYGNVS 344 (391)
T ss_pred eEEecCCCH-HHHHHHHHHcCCCHHHHHHHHHHHHHhCCch
Confidence 677788787 8999999999999988887778999999975
No 31
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=31.47 E-value=39 Score=36.48 Aligned_cols=31 Identities=19% Similarity=0.431 Sum_probs=25.9
Q ss_pred ceeecCCCchHHHHHHHHHHHHHHHHhhhhc
Q 016818 101 TVETSGFGSSFLAKLTIAVGVAATITLLSIG 131 (382)
Q Consensus 101 ~~~~~~~g~~fl~k~~ia~g~a~~~t~~s~~ 131 (382)
..=..++-=+||..++|++|+|++++++|++
T Consensus 263 ~~l~~~k~Rs~LT~lGI~iGi~svi~~~sig 293 (648)
T PRK10535 263 RAMAANKMRTLLTMLGIIIGIASVVSIVVVG 293 (648)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344566779999999999999999999876
No 32
>PLN03170 chalcone synthase; Provisional
Probab=30.95 E-value=24 Score=36.10 Aligned_cols=42 Identities=24% Similarity=0.392 Sum_probs=36.7
Q ss_pred hhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 249 IPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 249 i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+-+|+-.--|+ .+++.+.++++++++++..+-..+++|||..
T Consensus 301 i~~~v~Hqgg~-~il~~v~~~Lgl~~~~~~~s~~~l~~~GNts 342 (401)
T PLN03170 301 SIFWVAHPGGP-AILDQVEAKVGLEKERMRATRHVLSEYGNMS 342 (401)
T ss_pred cCeEEecCCcH-HHHHHHHHHcCCChHHHHHHHHHHHHhCccH
Confidence 55677777787 8999999999999999988889999999964
No 33
>PLN03171 chalcone synthase-like protein; Provisional
Probab=28.95 E-value=39 Score=34.48 Aligned_cols=38 Identities=26% Similarity=0.384 Sum_probs=32.6
Q ss_pred hhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeEE
Q 016818 254 GKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLIG 292 (382)
Q Consensus 254 GR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~i 292 (382)
-..-++ +.++.+.+++++++|++..+-..+++|||..-
T Consensus 312 ~Hq~~~-~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 312 VHPGSS-AILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred EcCCcH-HHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 377777 89999999999999888877788999999654
No 34
>PF14163 SieB: Superinfection exclusion protein B
Probab=28.84 E-value=64 Score=28.44 Aligned_cols=22 Identities=32% Similarity=0.643 Sum_probs=19.0
Q ss_pred HHHHHHHhccCccCchhHHHHH
Q 016818 182 YFWLLMAAGSGLFVSEEALNIW 203 (382)
Q Consensus 182 ~F~lLilaG~GLPIPEEalli~ 203 (382)
.+|+++++|+-+..|++++-..
T Consensus 2 m~~l~i~~~~llf~P~~~~~~l 23 (151)
T PF14163_consen 2 MLWLIIFSGLLLFLPESLLEWL 23 (151)
T ss_pred HHHHHHHHHHHHHCCHHHHHHh
Confidence 5799999999999999987654
No 35
>PRK10814 outer membrane-specific lipoprotein transporter subunit LolC; Provisional
Probab=27.29 E-value=54 Score=32.43 Aligned_cols=25 Identities=36% Similarity=0.445 Sum_probs=22.3
Q ss_pred CCchHHHHHHHHHHHHHHHHhhhhc
Q 016818 107 FGSSFLAKLTIAVGVAATITLLSIG 131 (382)
Q Consensus 107 ~g~~fl~k~~ia~g~a~~~t~~s~~ 131 (382)
+-.|+|..++|++|+|+.+++.|+.
T Consensus 24 ~~~s~lt~lgI~igv~~li~~~s~~ 48 (399)
T PRK10814 24 RFVSWLSTIGITLGVMALVTVLSVM 48 (399)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478999999999999999999983
No 36
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=26.19 E-value=64 Score=29.91 Aligned_cols=58 Identities=19% Similarity=0.169 Sum_probs=36.7
Q ss_pred CCccchhhhhchhhhhhHHHHHHHHHHhcCcHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHhhhcc
Q 016818 314 IPPDCFFAGVCCGGLLTLPIQLVIGFLLRERPVFALATVATVVGIWTVFPYAVAASTAIFLYLRHRY 380 (382)
Q Consensus 314 mpf~rFa~~~~~gaLiW~~lff~LG~~LGe~~~~i~~~v~~~vGi~~l~i~avai~~av~~~~kkr~ 380 (382)
.++.|+++....+.++|+..+..... +-...+..+ .-|+.+++++ ++.++.+|+|||+
T Consensus 144 ~~~~k~~~~~~~~~~~w~~~~~~~~~-lp~~inp~l-------~~~~~iiig~-i~~~~~~~lkkk~ 201 (206)
T PF06570_consen 144 PSWWKYILISVLAMVLWIVIFVLTSF-LPPVINPVL-------PPWVYIIIGV-IAFALRFYLKKKY 201 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-ccccCCcCC-------CHHHHHHHHH-HHHHHHHHHHHHh
Confidence 45667788888889999999988887 655544322 2333444333 3335556677765
No 37
>PLN02377 3-ketoacyl-CoA synthase
Probab=25.56 E-value=34 Score=36.65 Aligned_cols=42 Identities=10% Similarity=0.143 Sum_probs=36.0
Q ss_pred hhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 249 IPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 249 i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+-+|+=..-|+ ..++.+.+++++++++.+++-.-++||||-.
T Consensus 395 idhf~iHqggr-~IId~v~k~LgL~~~~~e~sr~tL~r~GNTS 436 (502)
T PLN02377 395 FDHFCIHAGGR-AVIDELEKNLQLLPVHVEASRMTLHRFGNTS 436 (502)
T ss_pred cCEEEECCCCH-HHHHHHHHHcCCCcccchHHHHHHHhcCCch
Confidence 44556666777 8999999999999999999999999999964
No 38
>PF13908 Shisa: Wnt and FGF inhibitory regulator
Probab=25.45 E-value=43 Score=30.23 Aligned_cols=26 Identities=15% Similarity=-0.023 Sum_probs=21.2
Q ss_pred CCchHHHHHHHHHHHHHHHHhhhhcc
Q 016818 107 FGSSFLAKLTIAVGVAATITLLSIGL 132 (382)
Q Consensus 107 ~g~~fl~k~~ia~g~a~~~t~~s~~~ 132 (382)
++..+++.++|.+||++++++|-+++
T Consensus 74 ~~~~~~iivgvi~~Vi~Iv~~Iv~~~ 99 (179)
T PF13908_consen 74 IYFITGIIVGVICGVIAIVVLIVCFC 99 (179)
T ss_pred ccceeeeeeehhhHHHHHHHhHhhhe
Confidence 45677888888999999988887776
No 39
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=25.02 E-value=26 Score=35.00 Aligned_cols=40 Identities=25% Similarity=0.240 Sum_probs=32.3
Q ss_pred hhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 249 IPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 249 i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+-+|+=...++ +.++.+.+++++++||+ ....+++|||..
T Consensus 262 id~~v~HQ~~~-~i~~~i~~~Lgl~~ek~--~~~~l~~~GNts 301 (353)
T PRK12880 262 IAFHLFHQSNA-YLVDCIKEELKLNDDKV--PNFIMEKYANLS 301 (353)
T ss_pred CCEEEECCCCH-HHHHHHHHHhCCCHHHh--hhhhHHhhCCHH
Confidence 66777777787 89999999999999765 235689999965
No 40
>PLN02192 3-ketoacyl-CoA synthase
Probab=23.73 E-value=45 Score=35.94 Aligned_cols=42 Identities=12% Similarity=0.131 Sum_probs=36.9
Q ss_pred hhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 249 IPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 249 i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+-.|+=..-|+ ..++.+.+++++++++.+++..-++||||-.
T Consensus 399 Idhf~iHqggr-~IId~v~k~LgL~~~~~e~sr~tL~rfGNTS 440 (511)
T PLN02192 399 FEHFCIHAGGR-AVLDELEKNLQLSDWHMEPSRMTLYRFGNTS 440 (511)
T ss_pred hceEeeccCCH-HHHHHHHHHcCCCchhhhHHHHHHhHcCChH
Confidence 55666677777 8999999999999999999999999999965
No 41
>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ]. CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. Transporter ZntB mediates efflux of zinc ions [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 2HN1_A 3NWI_D 3NVO_B 3CK6_A 2IUB_E 2BBJ_E 2HN2_A 2BBH_A.
Probab=23.08 E-value=28 Score=32.17 Aligned_cols=54 Identities=9% Similarity=0.200 Sum_probs=26.1
Q ss_pred hhchhhhhhHHHHHHHHHHhcCcHHHHHHHhhhhhhhhhh--hHHHHHHHHHHHHHhhh
Q 016818 322 GVCCGGLLTLPIQLVIGFLLRERPVFALATVATVVGIWTV--FPYAVAASTAIFLYLRH 378 (382)
Q Consensus 322 ~~~~gaLiW~~lff~LG~~LGe~~~~i~~~v~~~vGi~~l--~i~avai~~av~~~~kk 378 (382)
+...++++ +|+-+.-| ++|.|+..+-..-..+ |++.+ +++.+++++++|++.||
T Consensus 237 LT~~t~if-lPlt~i~g-~fGMN~~~~p~~~~~~-g~~~~~~~~~~~~~~~~~~~~~kR 292 (292)
T PF01544_consen 237 LTIVTAIF-LPLTFITG-IFGMNFKGMPELDWPY-GYFFVIILGLMILVAILLYWWFKR 292 (292)
T ss_dssp HHHHHHHH-HHHHHHTT-STTS-SS---SSSSSS--SHHH--HHHHHHHHHHHHCCTTS
T ss_pred HHHHHHHH-HHHHHHHH-HhhCCccCCCccCCcc-HHHHHHHHHHHHHHHHHHHHheeC
Confidence 34445555 77666555 4577776444444453 44443 44344455566655654
No 42
>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved.
Probab=22.94 E-value=1e+02 Score=24.28 Aligned_cols=33 Identities=12% Similarity=0.056 Sum_probs=18.6
Q ss_pred HHHHHHHHhcchhhhhhhhhccccCchhhhhhhc
Q 016818 237 LWVYWGVCISDMIPFYLGKLFTKSGASDDVCSKL 270 (382)
Q Consensus 237 l~vY~Gv~iGd~i~Y~LGR~lG~~~ll~r~~~Ki 270 (382)
+...+|+.+|..+++++.-.=|+ ...+++.++.
T Consensus 3 ~g~l~Ga~~Ga~~glL~aP~sG~-e~R~~l~~~~ 35 (74)
T PF12732_consen 3 LGFLAGAAAGAAAGLLFAPKSGK-ETREKLKDKA 35 (74)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcH-HHHHHHHHHH
Confidence 44556777777777666555555 4444444443
No 43
>PF09335 SNARE_assoc: SNARE associated Golgi protein; InterPro: IPR015414 This is a entry contains SNARE associated Golgi proteins. The yeast member of this family (P36164 from SWISSPROT) localises with the t-SNARE Tlg2 [].
Probab=21.73 E-value=1.2e+02 Score=24.46 Aligned_cols=49 Identities=12% Similarity=0.100 Sum_probs=36.5
Q ss_pred HHHHHHHHhcchhhhhhhhhccccCch-hhhhhhcCCChHHHHHHHHHHHhh
Q 016818 237 LWVYWGVCISDMIPFYLGKLFTKSGAS-DDVCSKLGISKEKALSITQSVQKY 287 (382)
Q Consensus 237 l~vY~Gv~iGd~i~Y~LGR~lG~~~ll-~r~~~Ki~it~eki~kie~~~qKY 287 (382)
..+.+-+++|.+++-.+...+|+ .+. ++..+|. ..+++.++.++.-+++
T Consensus 17 ~~~~~~~~~g~~~g~~~~y~lgr-~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 66 (123)
T PF09335_consen 17 WLGFLIATLGAVLGSLLAYLLGR-YFGRRRLRRKL-RKKKRIKRIERIERWF 66 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHh-cchHHHHHHHHHHHHH
Confidence 34555667788888889999999 666 4555555 7888888888888776
No 44
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=20.01 E-value=1.7e+02 Score=22.31 Aligned_cols=49 Identities=20% Similarity=0.155 Sum_probs=29.1
Q ss_pred hhhhcccCCCCccchhhhhchhhhhhHHHHHHHHHHhcCcHHHHHHHhhh
Q 016818 305 TAFLAGTMGIPPDCFFAGVCCGGLLTLPIQLVIGFLLRERPVFALATVAT 354 (382)
Q Consensus 305 ~~ylAGmsgmpf~rFa~~~~~gaLiW~~lff~LG~~LGe~~~~i~~~v~~ 354 (382)
+.+..|+.+++.++-+....+-+ +...++..+|+.+|+..........+
T Consensus 8 vg~~~g~~~~~~~~~~~~~~~ig-~~~~~~~~~G~~~G~~~~~~~~~~~~ 56 (67)
T PF02659_consen 8 VGISYGLRGISRRIILLIALIIG-IFQFIMPLLGLLLGRRLGRFIGSYAE 56 (67)
T ss_pred HHHHHHHHcCChHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566777777444333333333 44556778899999888554444344
Done!