Query 016818
Match_columns 382
No_of_seqs 54 out of 56
Neff 3.4
Searched_HMMs 13730
Date Mon Mar 25 04:18:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016818.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016818hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bi5a2 c.95.1.2 (A:236-389) C 70.0 0.43 3.1E-05 39.4 -0.0 42 249-291 62-103 (154)
2 d1u0ma2 c.95.1.2 (A:202-349) P 57.8 0.98 7.2E-05 36.5 -0.1 42 249-291 63-104 (148)
3 d1ee0a2 c.95.1.2 (A:236-395) P 55.1 1.1 8E-05 37.1 -0.2 42 249-291 67-108 (160)
4 d1u0ua2 c.95.1.2 (A:238-393) D 54.3 1.7 0.00012 35.5 0.9 42 249-291 63-104 (156)
5 d2iuba2 f.17.3.1 (A:286-349) M 53.2 2.7 0.0002 29.5 1.7 40 340-380 25-64 (64)
6 d1teda_ c.95.1.2 (A:) Polyketi 36.9 3.4 0.00025 36.8 0.0 41 249-290 286-326 (372)
7 d1xmeb2 f.17.2.1 (B:3-36) Bact 24.4 7.8 0.00057 24.8 0.1 16 174-189 10-25 (34)
8 d1x7fa2 c.1.8.12 (A:1-244) Out 23.1 24 0.0017 31.0 3.1 51 267-320 152-205 (244)
9 d1aisb2 a.74.1.2 (B:1206-1300) 20.3 30 0.0022 25.0 2.7 30 261-290 5-34 (95)
10 d1vola2 a.74.1.2 (A:208-316) T 16.7 40 0.0029 25.0 2.8 28 261-288 6-33 (109)
No 1
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=69.99 E-value=0.43 Score=39.35 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=37.5
Q ss_pred hhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 249 IPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 249 i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+-+|+-..-|. ..++.+.+++++++|++...-+.+++|||..
T Consensus 62 i~~~v~Hqgg~-~Ild~v~~~L~L~~~~~~~s~~vl~~yGN~S 103 (154)
T d1bi5a2 62 SIFWIAHPGGP-AILDQVEQKLALKPEKMNATREVLSEYGNMS 103 (154)
T ss_dssp SSEEEECCSSH-HHHHHHHHHHTCCGGGGHHHHHHHHHHCBCG
T ss_pred cceEeeccccH-HHHHHHHHHhCCCHHHHHHhHHHHHhcCCCC
Confidence 44777888888 9999999999999999999999999999963
No 2
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}
Probab=57.77 E-value=0.98 Score=36.51 Aligned_cols=42 Identities=19% Similarity=0.286 Sum_probs=35.3
Q ss_pred hhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 249 IPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 249 i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+-||+=..-+. ..++.+.+++++++|++...-+.+++|||..
T Consensus 63 id~~~~Hq~~~-~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~ 104 (148)
T d1u0ma2 63 LDFYIVHAGGP-RILDDLSTFLEVDPHAFRFSRATLTEYGNIA 104 (148)
T ss_dssp CSCCEEECSHH-HHHHHHHHHSCSCGGGGHHHHHHHHHTCBCT
T ss_pred CCEEEECCCCH-HHHHHHHHHhCCChhhhhHHHHHHHhcCCCC
Confidence 44566666677 8889999999999999998889999999964
No 3
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]}
Probab=55.12 E-value=1.1 Score=37.07 Aligned_cols=42 Identities=26% Similarity=0.382 Sum_probs=37.0
Q ss_pred hhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 249 IPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 249 i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+-+|+=..-|. ..++.+.++++++++++...-+.+++|||..
T Consensus 67 i~~~v~Hqgg~-~Ild~i~~~L~L~~~~l~~s~~vl~~yGNtS 108 (160)
T d1ee0a2 67 SVFWMVHPGGR-AILDQVERKLNLKEDKLRASRHVLSEYGNLI 108 (160)
T ss_dssp GSEEEECCSSH-HHHHHHHHHTTCCTTTTHHHHHHHHHHCBCG
T ss_pred cceEeecCCcH-HHHHHHHHHcCCCHHHHHHHHHHHHHhCCCc
Confidence 45777777788 9999999999999999999999999999963
No 4
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]}
Probab=54.35 E-value=1.7 Score=35.51 Aligned_cols=42 Identities=21% Similarity=0.322 Sum_probs=37.0
Q ss_pred hhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCeE
Q 016818 249 IPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNLI 291 (382)
Q Consensus 249 i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~~ 291 (382)
+-+|+=..-|. ..++.+.+++++.+|++...-+.+++|||..
T Consensus 63 id~~i~Hqgg~-~Ild~v~~~L~L~~~k~~~s~~~l~~~GN~s 104 (156)
T d1u0ua2 63 KLFWVVHPGGR-AILDRVEAKLNLDPTKLIPTRHVMSEYGNMS 104 (156)
T ss_dssp GSEEEECCSCH-HHHHHHHHHHTCCTTTTHHHHHHHHHHCBCG
T ss_pred CceEeecCCcH-HHHHHHHHHhCCCcccchhhHHHHhhcCCCC
Confidence 45677777787 8999999999999999999999999999975
No 5
>d2iuba2 f.17.3.1 (A:286-349) Magnesium transport protein CorA {Thermotoga maritima [TaxId: 2336]}
Probab=53.21 E-value=2.7 Score=29.54 Aligned_cols=40 Identities=8% Similarity=0.055 Sum_probs=15.6
Q ss_pred HhcCcHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHhhhcc
Q 016818 340 LLRERPVFALATVATVVGIWTVFPYAVAASTAIFLYLRHRY 380 (382)
Q Consensus 340 ~LGe~~~~i~~~v~~~vGi~~l~i~avai~~av~~~~kkr~ 380 (382)
++|-|...+-..-.. +++|.+..+.+.++..++++.||||
T Consensus 25 ifGMN~~~~P~~~~~-~~~~~~~~~~~~~~~~~~~~f~rkk 64 (64)
T d2iuba2 25 IYGMNFEYMPELRWK-WGYPVVLAVMGVIAVIMVVYFKKKK 64 (64)
T ss_dssp SCC---------------CHHHHHHHHHHHHHHHTTTTSCC
T ss_pred hhccCCCCCCCCCcc-HHHHHHHHHHHHHHHHHHHHHhccC
Confidence 356666544444445 3777766654455556666666664
No 6
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=36.89 E-value=3.4 Score=36.75 Aligned_cols=41 Identities=22% Similarity=0.249 Sum_probs=34.2
Q ss_pred hhhhhhhhccccCchhhhhhhcCCChHHHHHHHHHHHhhcCe
Q 016818 249 IPFYLGKLFTKSGASDDVCSKLGISKEKALSITQSVQKYGNL 290 (382)
Q Consensus 249 i~Y~LGR~lG~~~ll~r~~~Ki~it~eki~kie~~~qKYGn~ 290 (382)
+-+++-..-+. ...+.+.+++++++|++....+.+++|||.
T Consensus 286 id~~i~Hq~~~-~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~ 326 (372)
T d1teda_ 286 IDLWAIHPGGP-KIIEQSVRSLGISAELAAQSWDVLARFGNM 326 (372)
T ss_dssp CSCEEECCSCH-HHHHHHHHHHTCCGGGGHHHHHHHHHHCBC
T ss_pred hhhhhccCccH-HHHHHHHHHcCCCHHHhhhhHHHHhccCCc
Confidence 44556666666 788899999999999998888899999996
No 7
>d1xmeb2 f.17.2.1 (B:3-36) Bacterial ba3 type cytochrome c oxidase subunit II {Thermus thermophilus [TaxId: 274]}
Probab=24.41 E-value=7.8 Score=24.81 Aligned_cols=16 Identities=38% Similarity=0.700 Sum_probs=13.1
Q ss_pred cCCChhHHHHHHHHHh
Q 016818 174 PEYAPGWIYFWLLMAA 189 (382)
Q Consensus 174 p~~~pg~~~F~lLila 189 (382)
-.|..||..|.|-||-
T Consensus 10 layekgwlafslamlf 25 (34)
T d1xmeb2 10 LAYEKGWLAFSLAMLF 25 (34)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHH
Confidence 4578899999998874
No 8
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]}
Probab=23.07 E-value=24 Score=31.03 Aligned_cols=51 Identities=12% Similarity=0.062 Sum_probs=40.5
Q ss_pred hhhcCCChHHHHHHHHHHHhhcCeEEEEeecccc---cccchhhhcccCCCCccchh
Q 016818 267 CSKLGISKEKALSITQSVQKYGNLIGFVERFSLG---VRNPTAFLAGTMGIPPDCFF 320 (382)
Q Consensus 267 ~~Ki~it~eki~kie~~~qKYGn~~i~IgRF~PG---VRn~~~ylAGmsgmpf~rFa 320 (382)
++..|++.|.+.+-++++++||.-+ +-|+|| -|-|-|...|+-=+---|..
T Consensus 152 r~~TGLs~~~f~~~n~~~k~~gi~t---~AFI~g~~~~rGPwpl~eGLPTLE~HR~~ 205 (244)
T d1x7fa2 152 QKFTGLPYDYFIRCSERFKKHGIRS---AAFITSHVANIGPWDINDGLCTLEEHRNL 205 (244)
T ss_dssp STTCSBCHHHHHHHHHHHHHTTCCC---EEEECCSSCCBCSSSCCSCCBSBGGGTTS
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCE---EEEEeCCcccCCCccccCCCCchHHhcCC
Confidence 4788999999999999999999875 678888 67777788887655554544
No 9
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=20.30 E-value=30 Score=24.97 Aligned_cols=30 Identities=10% Similarity=0.113 Sum_probs=25.3
Q ss_pred CchhhhhhhcCCChHHHHHHHHHHHhhcCe
Q 016818 261 GASDDVCSKLGISKEKALSITQSVQKYGNL 290 (382)
Q Consensus 261 ~ll~r~~~Ki~it~eki~kie~~~qKYGn~ 290 (382)
-+.+|++++++++++-.+.+.+++++--+.
T Consensus 5 d~I~R~~~~L~L~~~i~~~A~~i~~~~~~~ 34 (95)
T d1aisb2 5 DYVNKFADELGLSEKVRRRAIEILDEAYKR 34 (95)
T ss_dssp GGHHHHHHHHTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHHc
Confidence 578899999999998888898888776554
No 10
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.74 E-value=40 Score=24.99 Aligned_cols=28 Identities=21% Similarity=0.284 Sum_probs=23.9
Q ss_pred CchhhhhhhcCCChHHHHHHHHHHHhhc
Q 016818 261 GASDDVCSKLGISKEKALSITQSVQKYG 288 (382)
Q Consensus 261 ~ll~r~~~Ki~it~eki~kie~~~qKYG 288 (382)
-+..|++++++++++-.+.+.+++++--
T Consensus 6 d~i~Rf~s~L~L~~~i~~~A~~i~~~~~ 33 (109)
T d1vola2 6 DFMSRFCSNLCLPKQVQMAATHIARKAV 33 (109)
T ss_dssp GTHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHH
Confidence 5788999999999988888888888753
Done!